locus-tag class description KCU58_00005 PF00308 Bacterial dnaA protein KCU58_00005 PF08299 Bacterial dnaA protein helix-turn-helix KCU58_00005 PF11638 DnaA N-terminal domain KCU58_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KCU58_00010 PF02767 DNA polymerase III beta subunit, central domain KCU58_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KCU58_00015 PF02463 RecF/RecN/SMC N terminal domain KCU58_00020 PF00204 DNA gyrase B KCU58_00020 PF00986 DNA gyrase B subunit, carboxyl terminus KCU58_00020 PF18053 DNA gyrase B subunit insert domain KCU58_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_00020 PF01751 Toprim domain KCU58_00025 PF02517 CPBP intramembrane metalloprotease KCU58_00030 PF01435 Peptidase family M48 KCU58_00040 PF03544 Gram-negative bacterial TonB protein C-terminal KCU58_00045 PF01618 MotA/TolQ/ExbB proton channel family KCU58_00050 PF02472 Biopolymer transport protein ExbD/TolR KCU58_00055 PF02472 Biopolymer transport protein ExbD/TolR KCU58_00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KCU58_00070 PF13091 PLD-like domain KCU58_00070 PF13396 Phospholipase_D-nuclease N-terminal KCU58_00075 PF04055 Radical SAM superfamily KCU58_00085 PF01810 LysE type translocator KCU58_00090 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KCU58_00095 PF00155 Aminotransferase class I and II KCU58_00100 PF07715 TonB-dependent Receptor Plug Domain KCU58_00100 PF00593 TonB dependent receptor KCU58_00110 PF02954 Bacterial regulatory protein, Fis family KCU58_00110 PF00158 Sigma-54 interaction domain KCU58_00110 PF01590 GAF domain KCU58_00115 PF00171 Aldehyde dehydrogenase family KCU58_00120 PF08240 Alcohol dehydrogenase GroES-like domain KCU58_00120 PF00107 Zinc-binding dehydrogenase KCU58_00140 PF02735 Ku70/Ku80 beta-barrel domain KCU58_00145 PF04679 ATP dependent DNA ligase C terminal region KCU58_00145 PF01068 ATP dependent DNA ligase domain KCU58_00145 PF13298 DNA polymerase Ligase (LigD) KCU58_00150 PF01070 FMN-dependent dehydrogenase KCU58_00175 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KCU58_00175 PF12241 Trans-2-enoyl-CoA reductase catalytic region KCU58_00175 PF07055 Enoyl reductase FAD binding domain KCU58_00185 PF00294 pfkB family carbohydrate kinase KCU58_00235 PF01804 Penicillin amidase KCU58_00260 PF02677 Epoxyqueuosine reductase QueH KCU58_00280 PF07715 TonB-dependent Receptor Plug Domain KCU58_00280 PF00593 TonB dependent receptor KCU58_00310 PF00135 Carboxylesterase family KCU58_00325 PF03480 Bacterial extracellular solute-binding protein, family 7 KCU58_00335 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KCU58_00340 PF04616 Glycosyl hydrolases family 43 KCU58_00340 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KCU58_00345 PF00356 Bacterial regulatory proteins, lacI family KCU58_00350 PF04962 KduI/IolB family KCU58_00370 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KCU58_00375 PF01037 Lrp/AsnC ligand binding domain KCU58_00390 PF01734 Patatin-like phospholipase KCU58_00405 PF01569 PAP2 superfamily KCU58_00410 PF01569 PAP2 superfamily KCU58_00420 PF03741 Integral membrane protein TerC family KCU58_00425 PF10672 S-adenosylmethionine-dependent methyltransferase KCU58_00425 PF17785 PUA-like domain KCU58_00450 PF04820 Tryptophan halogenase KCU58_00460 PF02595 Glycerate kinase family KCU58_00465 PF10947 Protein of unknown function (DUF2628) KCU58_00470 PF13520 Amino acid permease KCU58_00475 PF00196 Bacterial regulatory proteins, luxR family KCU58_00475 PF00072 Response regulator receiver domain KCU58_00480 PF13426 PAS domain KCU58_00480 PF08447 PAS fold KCU58_00480 PF00989 PAS fold KCU58_00480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_00480 PF13493 Domain of unknown function (DUF4118) KCU58_00480 PF00512 His Kinase A (phospho-acceptor) domain KCU58_00485 PF02308 MgtC family KCU58_00500 PF02646 RmuC family KCU58_00505 PF00255 Glutathione peroxidase KCU58_00510 PF04333 MlaA lipoprotein KCU58_00525 PF02470 MlaD protein KCU58_00530 PF02405 Permease MlaE KCU58_00535 PF00005 ABC transporter KCU58_00540 PF17946 RecC C-terminal domain KCU58_00545 PF12705 PD-(D/E)XK nuclease superfamily KCU58_00545 PF13361 UvrD-like helicase C-terminal domain KCU58_00545 PF00580 UvrD/REP helicase N-terminal domain KCU58_00550 PF13538 UvrD-like helicase C-terminal domain KCU58_00570 PF01230 HIT domain KCU58_00575 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KCU58_00580 PF09386 Antitoxin ParD KCU58_00635 PF00083 Sugar (and other) transporter KCU58_00640 PF01227 GTP cyclohydrolase I KCU58_00665 PF01925 Sulfite exporter TauE/SafE KCU58_00670 PF02810 SEC-C motif KCU58_00680 PF13406 Transglycosylase SLT domain KCU58_00685 PF07690 Major Facilitator Superfamily KCU58_00690 PF01126 Heme oxygenase KCU58_00695 PF13426 PAS domain KCU58_00695 PF08446 PAS fold KCU58_00695 PF01590 GAF domain KCU58_00695 PF00360 Phytochrome region KCU58_00735 PF02142 MGS-like domain KCU58_00740 PF00150 Cellulase (glycosyl hydrolase family 5) KCU58_00745 PF00150 Cellulase (glycosyl hydrolase family 5) KCU58_00750 PF00150 Cellulase (glycosyl hydrolase family 5) KCU58_00755 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU58_00755 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KCU58_00760 PF04898 Glutamate synthase central domain KCU58_00760 PF00310 Glutamine amidotransferases class-II KCU58_00760 PF01493 GXGXG motif KCU58_00760 PF01645 Conserved region in glutamate synthase KCU58_00805 PF00270 DEAD/DEAH box helicase KCU58_00805 PF09369 Domain of unknown function (DUF1998) KCU58_00805 PF00271 Helicase conserved C-terminal domain KCU58_00810 PF01381 Helix-turn-helix KCU58_00835 PF00083 Sugar (and other) transporter KCU58_00890 PF13614 AAA domain KCU58_00905 PF13091 PLD-like domain KCU58_00910 PF03061 Thioesterase superfamily KCU58_00920 PF12146 Serine aminopeptidase, S33 KCU58_00935 PF01161 Phosphatidylethanolamine-binding protein KCU58_00940 PF02673 Bacitracin resistance protein BacA KCU58_00945 PF00120 Glutamine synthetase, catalytic domain KCU58_00945 PF03951 Glutamine synthetase, beta-Grasp domain KCU58_00950 PF00543 Nitrogen regulatory protein P-II KCU58_00955 PF00909 Ammonium Transporter Family KCU58_00960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_00960 PF00512 His Kinase A (phospho-acceptor) domain KCU58_00960 PF00989 PAS fold KCU58_00965 PF02954 Bacterial regulatory protein, Fis family KCU58_00965 PF00158 Sigma-54 interaction domain KCU58_00965 PF00072 Response regulator receiver domain KCU58_00970 PF00080 Copper/zinc superoxide dismutase (SODC) KCU58_00975 PF00080 Copper/zinc superoxide dismutase (SODC) KCU58_00985 PF00108 Thiolase, N-terminal domain KCU58_00985 PF02803 Thiolase, C-terminal domain KCU58_01025 PF02556 Preprotein translocase subunit SecB KCU58_01030 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KCU58_01030 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KCU58_01040 PF00588 SpoU rRNA Methylase family KCU58_01050 PF05193 Peptidase M16 inactive domain KCU58_01050 PF00675 Insulinase (Peptidase family M16) KCU58_01060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KCU58_01060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KCU58_01065 PF02661 Fic/DOC family KCU58_01065 PF13784 Fic/DOC family N-terminal KCU58_01070 PF00561 alpha/beta hydrolase fold KCU58_01080 PF03692 Putative zinc- or iron-chelating domain KCU58_01085 PF00501 AMP-binding enzyme KCU58_01095 PF00144 Beta-lactamase KCU58_01100 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KCU58_01110 PF07478 D-ala D-ala ligase C-terminus KCU58_01110 PF01820 D-ala D-ala ligase N-terminus KCU58_01120 PF03109 ABC1 family KCU58_01125 PF02683 Cytochrome C biogenesis protein transmembrane region KCU58_01125 PF11412 Disulphide bond corrector protein DsbC KCU58_01130 PF00849 RNA pseudouridylate synthase KCU58_01140 PF00472 RF-1 domain KCU58_01150 PF01432 Peptidase family M3 KCU58_01160 PF12833 Helix-turn-helix domain KCU58_01170 PF03466 LysR substrate binding domain KCU58_01170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU58_01175 PF01274 Malate synthase KCU58_01180 PF00463 Isocitrate lyase family KCU58_01185 PF00990 Diguanylate cyclase, GGDEF domain KCU58_01215 PF00916 Sulfate permease family KCU58_01215 PF01740 STAS domain KCU58_01250 PF12146 Serine aminopeptidase, S33 KCU58_01255 PF00107 Zinc-binding dehydrogenase KCU58_01255 PF16884 N-terminal domain of oxidoreductase KCU58_01260 PF00248 Aldo/keto reductase family KCU58_01270 PF00849 RNA pseudouridylate synthase KCU58_01295 PF01026 TatD related DNase KCU58_01310 PF01061 ABC-2 type transporter KCU58_01315 PF00005 ABC transporter KCU58_01320 PF00970 Oxidoreductase FAD-binding domain KCU58_01320 PF00111 2Fe-2S iron-sulfur cluster binding domain KCU58_01320 PF00175 Oxidoreductase NAD-binding domain KCU58_01330 PF01381 Helix-turn-helix KCU58_01335 PF00561 alpha/beta hydrolase fold KCU58_01340 PF00005 ABC transporter KCU58_01355 PF03350 Uncharacterized protein family, UPF0114 KCU58_01360 PF02798 Glutathione S-transferase, N-terminal domain KCU58_01360 PF00043 Glutathione S-transferase, C-terminal domain KCU58_01365 PF00326 Prolyl oligopeptidase family KCU58_01365 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KCU58_01395 PF00490 Delta-aminolevulinic acid dehydratase KCU58_01415 PF00175 Oxidoreductase NAD-binding domain KCU58_01415 PF00258 Flavodoxin KCU58_01415 PF00667 FAD binding domain KCU58_01420 PF07676 WD40-like Beta Propeller Repeat KCU58_01420 PF04052 TolB amino-terminal domain KCU58_01425 PF08501 Shikimate dehydrogenase substrate binding domain KCU58_01425 PF01488 Shikimate / quinate 5-dehydrogenase KCU58_01425 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KCU58_01435 PF13307 Helicase C-terminal domain KCU58_01435 PF06733 DEAD_2 KCU58_01445 PF06628 Catalase-related immune-responsive KCU58_01445 PF00199 Catalase KCU58_01460 PF00326 Prolyl oligopeptidase family KCU58_01465 PF04993 TfoX N-terminal domain KCU58_01495 PF00202 Aminotransferase class-III KCU58_01520 PF01594 AI-2E family transporter KCU58_01530 PF07995 Glucose / Sorbosone dehydrogenase KCU58_01550 PF03120 NAD-dependent DNA ligase OB-fold domain KCU58_01550 PF01653 NAD-dependent DNA ligase adenylation domain KCU58_01550 PF00533 BRCA1 C Terminus (BRCT) domain KCU58_01570 PF00920 Dehydratase family KCU58_01580 PF03738 Glutathionylspermidine synthase preATP-grasp KCU58_01590 PF07726 ATPase family associated with various cellular activities (AAA) KCU58_01590 PF17863 AAA lid domain KCU58_01625 PF07690 Major Facilitator Superfamily KCU58_01635 PF00132 Bacterial transferase hexapeptide (six repeats) KCU58_01650 PF00529 HlyD membrane-fusion protein of T1SS KCU58_01650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KCU58_01655 PF00873 AcrB/AcrD/AcrF family KCU58_01660 PF02321 Outer membrane efflux protein KCU58_01665 PF00563 EAL domain KCU58_01665 PF00990 Diguanylate cyclase, GGDEF domain KCU58_01665 PF03707 Bacterial signalling protein N terminal repeat KCU58_01670 PF01134 Glucose inhibited division protein A KCU58_01670 PF13932 GidA associated domain KCU58_01680 PF00291 Pyridoxal-phosphate dependent enzyme KCU58_01695 PF13649 Methyltransferase domain KCU58_01705 PF12697 Alpha/beta hydrolase family KCU58_01710 PF00155 Aminotransferase class I and II KCU58_01715 PF06968 Biotin and Thiamin Synthesis associated domain KCU58_01715 PF04055 Radical SAM superfamily KCU58_01725 PF02355 Protein export membrane protein KCU58_01725 PF07549 SecD/SecF GG Motif KCU58_01730 PF01040 UbiA prenyltransferase family KCU58_01755 PF13335 Magnesium chelatase, subunit ChlI C-terminal KCU58_01755 PF01078 Magnesium chelatase, subunit ChlI KCU58_01760 PF04380 Membrane fusogenic activity KCU58_01770 PF00543 Nitrogen regulatory protein P-II KCU58_01785 PF17284 Spermidine synthase tetramerisation domain KCU58_01790 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KCU58_01790 PF17944 Arginine decarboxylase C-terminal helical extension KCU58_01790 PF17810 Arginine decarboxylase helical bundle domain KCU58_01805 PF01757 Acyltransferase family KCU58_01810 PF03466 LysR substrate binding domain KCU58_01810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU58_01830 PF00106 short chain dehydrogenase KCU58_01840 PF00750 tRNA synthetases class I (R) KCU58_01840 PF05746 DALR anticodon binding domain KCU58_01840 PF03485 Arginyl tRNA synthetase N terminal domain KCU58_01845 PF04002 RadC-like JAB domain KCU58_01850 PF02441 Flavoprotein KCU58_01850 PF04127 DNA / pantothenate metabolism flavoprotein KCU58_01855 PF00692 dUTPase KCU58_01860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KCU58_01860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KCU58_01860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KCU58_01860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KCU58_01870 PF00156 Phosphoribosyl transferase domain KCU58_01880 PF07690 Major Facilitator Superfamily KCU58_01890 PF03702 Anhydro-N-acetylmuramic acid kinase KCU58_01895 PF01551 Peptidase family M23 KCU58_01895 PF04225 Opacity-associated protein A LysM-like domain KCU58_01900 PF00579 tRNA synthetases class I (W and Y) KCU58_01930 PF00107 Zinc-binding dehydrogenase KCU58_01930 PF08240 Alcohol dehydrogenase GroES-like domain KCU58_01935 PF04389 Peptidase family M28 KCU58_01945 PF01551 Peptidase family M23 KCU58_01950 PF13180 PDZ domain KCU58_01950 PF03572 Peptidase family S41 KCU58_01965 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KCU58_01995 PF14850 DNA-binding domain of Proline dehydrogenase KCU58_01995 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KCU58_01995 PF00171 Aldehyde dehydrogenase family KCU58_01995 PF01619 Proline dehydrogenase KCU58_02005 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KCU58_02005 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KCU58_02010 PF00115 Cytochrome C and Quinol oxidase polypeptide I KCU58_02015 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 KCU58_02020 PF00510 Cytochrome c oxidase subunit III KCU58_02045 PF01040 UbiA prenyltransferase family KCU58_02055 PF13593 SBF-like CPA transporter family (DUF4137) KCU58_02060 PF08275 DNA primase catalytic core, N-terminal domain KCU58_02060 PF08278 DNA primase DnaG DnaB-binding KCU58_02060 PF10410 DnaB-helicase binding domain of primase KCU58_02060 PF01807 CHC2 zinc finger KCU58_02065 PF03631 Virulence factor BrkB KCU58_02075 PF01165 Ribosomal protein S21 KCU58_02085 PF02152 Dihydroneopterin aldolase KCU58_02090 PF14403 Circularly permuted ATP-grasp type 2 KCU58_02100 PF01915 Glycosyl hydrolase family 3 C-terminal domain KCU58_02100 PF00933 Glycosyl hydrolase family 3 N terminal domain KCU58_02100 PF14310 Fibronectin type III-like domain KCU58_02105 PF07995 Glucose / Sorbosone dehydrogenase KCU58_02125 PF13520 Amino acid permease KCU58_02135 PF13378 Enolase C-terminal domain-like KCU58_02135 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KCU58_02145 PF07715 TonB-dependent Receptor Plug Domain KCU58_02145 PF00593 TonB dependent receptor KCU58_02150 PF01510 N-acetylmuramoyl-L-alanine amidase KCU58_02200 PF07063 Domain of unknown function (DUF1338) KCU58_02210 PF00873 AcrB/AcrD/AcrF family KCU58_02215 PF00873 AcrB/AcrD/AcrF family KCU58_02220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KCU58_02230 PF14489 QueF-like protein KCU58_02230 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KCU58_02235 PF04972 BON domain KCU58_02235 PF01476 LysM domain KCU58_02245 PF09827 CRISPR associated protein Cas2 KCU58_02250 PF01867 CRISPR associated protein Cas1 KCU58_02270 PF09704 CRISPR-associated protein (Cas_Cas5) KCU58_02285 PF03971 Monomeric isocitrate dehydrogenase KCU58_02295 PF07715 TonB-dependent Receptor Plug Domain KCU58_02295 PF00593 TonB dependent receptor KCU58_02300 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) KCU58_02310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KCU58_02310 PF07498 Rho termination factor, N-terminal domain KCU58_02310 PF07497 Rho termination factor, RNA-binding domain KCU58_02315 PF00085 Thioredoxin KCU58_02320 PF00270 DEAD/DEAH box helicase KCU58_02320 PF00271 Helicase conserved C-terminal domain KCU58_02320 PF12300 ATP-dependent RNA helicase RhlB KCU58_02325 PF00005 ABC transporter KCU58_02330 PF18075 FtsX extracellular domain KCU58_02335 PF01339 CheB methylesterase KCU58_02335 PF00072 Response regulator receiver domain KCU58_02340 PF03167 Uracil DNA glycosylase superfamily KCU58_02345 PF04542 Sigma-70 region 2 KCU58_02345 PF00140 Sigma-70 factor, region 1.2 KCU58_02345 PF04545 Sigma-70, region 4 KCU58_02350 PF03458 UPF0126 domain KCU58_02355 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU58_02365 PF00270 DEAD/DEAH box helicase KCU58_02365 PF00271 Helicase conserved C-terminal domain KCU58_02365 PF17764 3′ DNA-binding domain (3′BD) KCU58_02365 PF18074 Primosomal protein N C-terminal domain KCU58_02365 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KCU58_02375 PF01554 MatE KCU58_02380 PF01343 Peptidase family S49 KCU58_02405 PF01300 Telomere recombination KCU58_02410 PF01131 DNA topoisomerase KCU58_02410 PF13368 Topoisomerase C-terminal repeat KCU58_02410 PF01751 Toprim domain KCU58_02415 PF06271 RDD family KCU58_02425 PF04361 Protein of unknown function (DUF494) KCU58_02430 PF17782 DprA winged helix domain KCU58_02430 PF02481 DNA recombination-mediator protein A KCU58_02435 PF01476 LysM domain KCU58_02440 PF01327 Polypeptide deformylase KCU58_02445 PF02911 Formyl transferase, C-terminal domain KCU58_02445 PF00551 Formyl transferase KCU58_02450 PF01189 16S rRNA methyltransferase RsmB/F KCU58_02450 PF01029 NusB family KCU58_02455 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase KCU58_02470 PF00535 Glycosyl transferase family 2 KCU58_02490 PF00925 GTP cyclohydrolase II KCU58_02495 PF00583 Acetyltransferase (GNAT) family KCU58_02505 PF02580 D-Tyr-tRNA(Tyr) deacylase KCU58_02510 PF04542 Sigma-70 region 2 KCU58_02510 PF04539 Sigma-70 region 3 KCU58_02510 PF03979 Sigma-70 factor, region 1.1 KCU58_02510 PF00140 Sigma-70 factor, region 1.2 KCU58_02510 PF04545 Sigma-70, region 4 KCU58_02510 PF04546 Sigma-70, non-essential region KCU58_02515 PF03377 TAL effector repeat KCU58_02535 PF07690 Major Facilitator Superfamily KCU58_02540 PF00356 Bacterial regulatory proteins, lacI family KCU58_02540 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KCU58_02550 PF00128 Alpha amylase, catalytic domain KCU58_02550 PF11896 Domain of unknown function (DUF3416) KCU58_02555 PF16657 Maltogenic Amylase, C-terminal domain KCU58_02555 PF00128 Alpha amylase, catalytic domain KCU58_02560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KCU58_02560 PF00128 Alpha amylase, catalytic domain KCU58_02560 PF02806 Alpha amylase, C-terminal all-beta domain KCU58_02580 PF03377 TAL effector repeat KCU58_02600 PF12706 Beta-lactamase superfamily domain KCU58_02605 PF00440 Bacterial regulatory proteins, tetR family KCU58_02605 PF08359 YsiA-like protein, C-terminal region KCU58_02610 PF01494 FAD binding domain KCU58_02645 PF02203 Tar ligand binding domain homologue KCU58_02645 PF00672 HAMP domain KCU58_02645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_02660 PF05067 Manganese containing catalase KCU58_02665 PF05974 Domain of unknown function (DUF892) KCU58_02670 PF05974 Domain of unknown function (DUF892) KCU58_02680 PF00563 EAL domain KCU58_02680 PF00990 Diguanylate cyclase, GGDEF domain KCU58_02680 PF03707 Bacterial signalling protein N terminal repeat KCU58_02685 PF06745 KaiC KCU58_02695 PF00440 Bacterial regulatory proteins, tetR family KCU58_02700 PF00970 Oxidoreductase FAD-binding domain KCU58_02700 PF00175 Oxidoreductase NAD-binding domain KCU58_02700 PF00111 2Fe-2S iron-sulfur cluster binding domain KCU58_02705 PF00487 Fatty acid desaturase KCU58_02715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KCU58_02715 PF00205 Thiamine pyrophosphate enzyme, central domain KCU58_02715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KCU58_02720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_02720 PF00512 His Kinase A (phospho-acceptor) domain KCU58_02725 PF02954 Bacterial regulatory protein, Fis family KCU58_02725 PF00158 Sigma-54 interaction domain KCU58_02725 PF00072 Response regulator receiver domain KCU58_02745 PF07690 Major Facilitator Superfamily KCU58_02755 PF11867 Domain of unknown function (DUF3387) KCU58_02755 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KCU58_02755 PF18766 SWI2/SNF2 ATPase KCU58_02760 PF01420 Type I restriction modification DNA specificity domain KCU58_02770 PF02384 N-6 DNA Methylase KCU58_02770 PF12161 HsdM N-terminal domain KCU58_02785 PF10414 Sirohaem synthase dimerisation region KCU58_02785 PF14824 Sirohaem biosynthesis protein central KCU58_02785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KCU58_02790 PF01339 CheB methylesterase KCU58_02790 PF00072 Response regulator receiver domain KCU58_02795 PF00005 ABC transporter KCU58_02800 PF07690 Major Facilitator Superfamily KCU58_02805 PF04324 BFD-like [2Fe-2S] binding domain KCU58_02805 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KCU58_02805 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KCU58_02805 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU58_02805 PF18267 Rubredoxin NAD+ reductase C-terminal domain KCU58_02810 PF00355 Rieske [2Fe-2S] domain KCU58_02815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KCU58_02815 PF04324 BFD-like [2Fe-2S] binding domain KCU58_02815 PF01568 Molydopterin dinucleotide binding domain KCU58_02815 PF00384 Molybdopterin oxidoreductase KCU58_02820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KCU58_02825 PF00128 Alpha amylase, catalytic domain KCU58_02825 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KCU58_02835 PF00128 Alpha amylase, catalytic domain KCU58_02840 PF02446 4-alpha-glucanotransferase KCU58_02845 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KCU58_02845 PF00128 Alpha amylase, catalytic domain KCU58_02845 PF11941 Domain of unknown function (DUF3459) KCU58_02850 PF00128 Alpha amylase, catalytic domain KCU58_02850 PF02806 Alpha amylase, C-terminal all-beta domain KCU58_02850 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KCU58_02855 PF08323 Starch synthase catalytic domain KCU58_02855 PF00534 Glycosyl transferases group 1 KCU58_02865 PF00486 Transcriptional regulatory protein, C terminal KCU58_02865 PF00072 Response regulator receiver domain KCU58_02870 PF00072 Response regulator receiver domain KCU58_02870 PF13188 PAS domain KCU58_02870 PF00512 His Kinase A (phospho-acceptor) domain KCU58_02870 PF08448 PAS fold KCU58_02870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_02875 PF13632 Glycosyl transferase family group 2 KCU58_02885 PF00072 Response regulator receiver domain KCU58_02885 PF04397 LytTr DNA-binding domain KCU58_02890 PF03900 Porphobilinogen deaminase, C-terminal domain KCU58_02890 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KCU58_02905 PF01638 HxlR-like helix-turn-helix KCU58_02920 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KCU58_02920 PF00326 Prolyl oligopeptidase family KCU58_02925 PF00155 Aminotransferase class I and II KCU58_02930 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KCU58_02930 PF00326 Prolyl oligopeptidase family KCU58_02935 PF04304 Protein of unknown function (DUF454) KCU58_02945 PF01678 Diaminopimelate epimerase KCU58_02955 PF02899 Phage integrase, N-terminal SAM-like domain KCU58_02955 PF00589 Phage integrase family KCU58_02960 PF00227 Proteasome subunit KCU58_02965 PF07724 AAA domain (Cdc48 subfamily) KCU58_02965 PF10431 C-terminal, D2-small domain, of ClpB protein KCU58_02965 PF00004 ATPase family associated with various cellular activities (AAA) KCU58_02980 PF07715 TonB-dependent Receptor Plug Domain KCU58_02980 PF00593 TonB dependent receptor KCU58_02990 PF01209 ubiE/COQ5 methyltransferase family KCU58_02995 PF11838 ERAP1-like C-terminal domain KCU58_02995 PF01433 Peptidase family M1 domain KCU58_03000 PF00561 alpha/beta hydrolase fold KCU58_03000 PF00364 Biotin-requiring enzyme KCU58_03020 PF00294 pfkB family carbohydrate kinase KCU58_03030 PF04085 rod shape-determining protein MreC KCU58_03040 PF00905 Penicillin binding protein transpeptidase domain KCU58_03040 PF03717 Penicillin-binding Protein dimerisation domain KCU58_03045 PF01098 Cell cycle protein KCU58_03050 PF01083 Cutinase KCU58_03055 PF00295 Glycosyl hydrolases family 28 KCU58_03060 PF13406 Transglycosylase SLT domain KCU58_03065 PF03330 Lytic transglycolase KCU58_03065 PF05036 Sporulation related domain KCU58_03070 PF07943 Penicillin-binding protein 5, C-terminal domain KCU58_03070 PF00768 D-alanyl-D-alanine carboxypeptidase KCU58_03100 PF04359 Protein of unknown function (DUF493) KCU58_03105 PF03099 Biotin/lipoate A/B protein ligase family KCU58_03110 PF04055 Radical SAM superfamily KCU58_03110 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KCU58_03115 PF03572 Peptidase family S41 KCU58_03115 PF17804 Tail specific protease N-terminal domain KCU58_03115 PF11818 C-terminal domain of tail specific protease (DUF3340) KCU58_03115 PF00595 PDZ domain KCU58_03135 PF01467 Cytidylyltransferase-like KCU58_03135 PF00293 NUDIX domain KCU58_03170 PF04055 Radical SAM superfamily KCU58_03170 PF06969 HemN C-terminal domain KCU58_03175 PF01725 Ham1 family KCU58_03180 PF01138 3' exoribonuclease family, domain 1 KCU58_03180 PF03725 3' exoribonuclease family, domain 2 KCU58_03185 PF03755 YicC-like family, N-terminal region KCU58_03185 PF08340 Domain of unknown function (DUF1732) KCU58_03190 PF00625 Guanylate kinase KCU58_03195 PF01192 RNA polymerase Rpb6 KCU58_03200 PF13291 ACT domain KCU58_03200 PF04607 Region found in RelA / SpoT proteins KCU58_03200 PF02824 TGS domain KCU58_03215 PF01042 Endoribonuclease L-PSP KCU58_03220 PF00271 Helicase conserved C-terminal domain KCU58_03220 PF17191 RecG wedge domain KCU58_03220 PF00270 DEAD/DEAH box helicase KCU58_03225 PF01156 Inosine-uridine preferring nucleoside hydrolase KCU58_03230 PF01197 Ribosomal protein L31 KCU58_03235 PF00285 Citrate synthase, C-terminal domain KCU58_03240 PF01527 Transposase KCU58_03250 PF01207 Dihydrouridine synthase (Dus) KCU58_03265 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KCU58_03265 PF00294 pfkB family carbohydrate kinase KCU58_03270 PF07670 Nucleoside recognition KCU58_03270 PF07662 Na+ dependent nucleoside transporter C-terminus KCU58_03270 PF01773 Na+ dependent nucleoside transporter N-terminus KCU58_03275 PF00248 Aldo/keto reductase family KCU58_03285 PF07715 TonB-dependent Receptor Plug Domain KCU58_03285 PF00593 TonB dependent receptor KCU58_03310 PF00005 ABC transporter KCU58_03315 PF13472 GDSL-like Lipase/Acylhydrolase family KCU58_03320 PF00072 Response regulator receiver domain KCU58_03320 PF00486 Transcriptional regulatory protein, C terminal KCU58_03325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_03325 PF08521 Two-component sensor kinase N-terminal KCU58_03325 PF00512 His Kinase A (phospho-acceptor) domain KCU58_03335 PF01219 Prokaryotic diacylglycerol kinase KCU58_03340 PF03741 Integral membrane protein TerC family KCU58_03345 PF04011 LemA family KCU58_03360 PF01790 Prolipoprotein diacylglyceryl transferase KCU58_03365 PF00303 Thymidylate synthase KCU58_03370 PF00186 Dihydrofolate reductase KCU58_03380 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KCU58_03380 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KCU58_03390 PF02350 UDP-N-acetylglucosamine 2-epimerase KCU58_03400 PF13632 Glycosyl transferase family group 2 KCU58_03400 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KCU58_03425 PF01327 Polypeptide deformylase KCU58_03435 PF12848 ABC transporter KCU58_03435 PF00005 ABC transporter KCU58_03440 PF07690 Major Facilitator Superfamily KCU58_03465 PF00464 Serine hydroxymethyltransferase KCU58_03470 PF03477 ATP cone domain KCU58_03480 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KCU58_03480 PF01872 RibD C-terminal domain KCU58_03485 PF00677 Lumazine binding domain KCU58_03490 PF00925 GTP cyclohydrolase II KCU58_03490 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KCU58_03495 PF00885 6,7-dimethyl-8-ribityllumazine synthase KCU58_03500 PF01029 NusB family KCU58_03505 PF00586 AIR synthase related protein, N-terminal domain KCU58_03505 PF02769 AIR synthase related protein, C-terminal domain KCU58_03530 PF03814 Potassium-transporting ATPase A subunit KCU58_03540 PF02669 K+-transporting ATPase, c chain KCU58_03545 PF13493 Domain of unknown function (DUF4118) KCU58_03545 PF13492 GAF domain KCU58_03545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_03545 PF00512 His Kinase A (phospho-acceptor) domain KCU58_03545 PF02702 Osmosensitive K+ channel His kinase sensor domain KCU58_03550 PF00072 Response regulator receiver domain KCU58_03550 PF00486 Transcriptional regulatory protein, C terminal KCU58_03555 PF01565 FAD binding domain KCU58_03555 PF02913 FAD linked oxidases, C-terminal domain KCU58_03565 PF02021 Uncharacterised protein family UPF0102 KCU58_03575 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KCU58_03600 PF02381 MraZ protein, putative antitoxin-like KCU58_03605 PF01795 MraW methylase family KCU58_03610 PF04999 Cell division protein FtsL KCU58_03615 PF03717 Penicillin-binding Protein dimerisation domain KCU58_03615 PF00905 Penicillin binding protein transpeptidase domain KCU58_03620 PF01225 Mur ligase family, catalytic domain KCU58_03620 PF02875 Mur ligase family, glutamate ligase domain KCU58_03620 PF08245 Mur ligase middle domain KCU58_03625 PF01225 Mur ligase family, catalytic domain KCU58_03625 PF02875 Mur ligase family, glutamate ligase domain KCU58_03625 PF08245 Mur ligase middle domain KCU58_03630 PF00953 Glycosyl transferase family 4 KCU58_03635 PF01098 Cell cycle protein KCU58_03640 PF04101 Glycosyltransferase family 28 C-terminal domain KCU58_03640 PF03033 Glycosyltransferase family 28 N-terminal domain KCU58_03645 PF01225 Mur ligase family, catalytic domain KCU58_03645 PF02875 Mur ligase family, glutamate ligase domain KCU58_03645 PF08245 Mur ligase middle domain KCU58_03650 PF07478 D-ala D-ala ligase C-terminus KCU58_03650 PF01820 D-ala D-ala ligase N-terminus KCU58_03655 PF03799 Cell division protein FtsQ KCU58_03655 PF08478 POTRA domain, FtsQ-type KCU58_03660 PF02491 SHS2 domain inserted in FTSA KCU58_03665 PF12327 FtsZ family, C-terminal domain KCU58_03665 PF00091 Tubulin/FtsZ family, GTPase domain KCU58_03670 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KCU58_03680 PF01476 LysM domain KCU58_03680 PF08525 Opacity-associated protein A N-terminal motif KCU58_03680 PF01551 Peptidase family M23 KCU58_03685 PF02810 SEC-C motif KCU58_03685 PF07517 SecA DEAD-like domain KCU58_03685 PF01043 SecA preprotein cross-linking domain KCU58_03685 PF07516 SecA Wing and Scaffold domain KCU58_03695 PF00293 NUDIX domain KCU58_03705 PF02219 Methylenetetrahydrofolate reductase KCU58_03730 PF13649 Methyltransferase domain KCU58_03735 PF05221 S-adenosyl-L-homocysteine hydrolase KCU58_03735 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KCU58_03740 PF00311 Phosphoenolpyruvate carboxylase KCU58_03765 PF00328 Histidine phosphatase superfamily (branch 2) KCU58_03770 PF02773 S-adenosylmethionine synthetase, C-terminal domain KCU58_03770 PF02772 S-adenosylmethionine synthetase, central domain KCU58_03770 PF00438 S-adenosylmethionine synthetase, N-terminal domain KCU58_03785 PF01370 NAD dependent epimerase/dehydratase family KCU58_03785 PF08338 Domain of unknown function (DUF1731) KCU58_03800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KCU58_03800 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KCU58_03805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KCU58_03805 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KCU58_03810 PF04972 BON domain KCU58_03820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_03820 PF00512 His Kinase A (phospho-acceptor) domain KCU58_03820 PF00989 PAS fold KCU58_03825 PF00072 Response regulator receiver domain KCU58_03830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_03830 PF00512 His Kinase A (phospho-acceptor) domain KCU58_03840 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KCU58_03875 PF16355 Domain of unknown function (DUF4982) KCU58_03875 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 KCU58_03875 PF00703 Glycosyl hydrolases family 2 KCU58_03875 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KCU58_03875 PF02837 Glycosyl hydrolases family 2, sugar binding domain KCU58_03890 PF00392 Bacterial regulatory proteins, gntR family KCU58_03890 PF07702 UTRA domain KCU58_03895 PF07690 Major Facilitator Superfamily KCU58_03900 PF00356 Bacterial regulatory proteins, lacI family KCU58_03905 PF01380 SIS domain KCU58_03910 PF01979 Amidohydrolase family KCU58_03915 PF01966 HD domain KCU58_03915 PF01743 Poly A polymerase head domain KCU58_03915 PF12627 Probable RNA and SrmB- binding site of polymerase A KCU58_03920 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain KCU58_03920 PF01464 Transglycosylase SLT domain KCU58_03925 PF00593 TonB dependent receptor KCU58_03925 PF07715 TonB-dependent Receptor Plug Domain KCU58_03940 PF01323 DSBA-like thioredoxin domain KCU58_03945 PF01323 DSBA-like thioredoxin domain KCU58_03950 PF00034 Cytochrome c KCU58_03955 PF01926 50S ribosome-binding GTPase KCU58_03975 PF04107 Glutamate-cysteine ligase family 2(GCS2) KCU58_03990 PF16527 Two-component sensor protein CpxA, periplasmic domain KCU58_03990 PF00672 HAMP domain KCU58_03990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_03990 PF00512 His Kinase A (phospho-acceptor) domain KCU58_03995 PF00072 Response regulator receiver domain KCU58_03995 PF00486 Transcriptional regulatory protein, C terminal KCU58_04000 PF02583 Metal-sensitive transcriptional repressor KCU58_04005 PF08240 Alcohol dehydrogenase GroES-like domain KCU58_04005 PF00107 Zinc-binding dehydrogenase KCU58_04010 PF04828 Glutathione-dependent formaldehyde-activating enzyme KCU58_04015 PF00756 Putative esterase KCU58_04025 PF02567 Phenazine biosynthesis-like protein KCU58_04050 PF01979 Amidohydrolase family KCU58_04050 PF00449 Urease alpha-subunit, N-terminal domain KCU58_04055 PF01979 Amidohydrolase family KCU58_04075 PF00462 Glutaredoxin KCU58_04080 PF01522 Polysaccharide deacetylase KCU58_04100 PF00155 Aminotransferase class I and II KCU58_04105 PF03193 RsgA GTPase KCU58_04120 PF00128 Alpha amylase, catalytic domain KCU58_04135 PF00356 Bacterial regulatory proteins, lacI family KCU58_04140 PF00106 short chain dehydrogenase KCU58_04145 PF03600 Citrate transporter KCU58_04155 PF00072 Response regulator receiver domain KCU58_04155 PF00486 Transcriptional regulatory protein, C terminal KCU58_04160 PF08521 Two-component sensor kinase N-terminal KCU58_04160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_04160 PF00512 His Kinase A (phospho-acceptor) domain KCU58_04170 PF00196 Bacterial regulatory proteins, luxR family KCU58_04170 PF00072 Response regulator receiver domain KCU58_04180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_04180 PF00512 His Kinase A (phospho-acceptor) domain KCU58_04190 PF00375 Sodium:dicarboxylate symporter family KCU58_04195 PF01515 Phosphate acetyl/butaryl transferase KCU58_04195 PF03949 Malic enzyme, NAD binding domain KCU58_04195 PF00390 Malic enzyme, N-terminal domain KCU58_04255 PF00664 ABC transporter transmembrane region KCU58_04255 PF00005 ABC transporter KCU58_04255 PF03412 Peptidase C39 family KCU58_04280 PF03279 Bacterial lipid A biosynthesis acyltransferase KCU58_04285 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KCU58_04290 PF02321 Outer membrane efflux protein KCU58_04305 PF00990 Diguanylate cyclase, GGDEF domain KCU58_04310 PF00180 Isocitrate/isopropylmalate dehydrogenase KCU58_04315 PF00694 Aconitase C-terminal domain KCU58_04325 PF00330 Aconitase family (aconitate hydratase) KCU58_04335 PF00682 HMGL-like KCU58_04335 PF08502 LeuA allosteric (dimerisation) domain KCU58_04340 PF00291 Pyridoxal-phosphate dependent enzyme KCU58_04350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KCU58_04350 PF00205 Thiamine pyrophosphate enzyme, central domain KCU58_04350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KCU58_04355 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KCU58_04355 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KCU58_04360 PF00672 HAMP domain KCU58_04360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_04365 PF13667 ThiC-associated domain KCU58_04365 PF01964 Radical SAM ThiC family KCU58_04380 PF00719 Inorganic pyrophosphatase KCU58_04390 PF03030 Inorganic H+ pyrophosphatase KCU58_04400 PF00365 Phosphofructokinase KCU58_04410 PF01225 Mur ligase family, catalytic domain KCU58_04410 PF08245 Mur ligase middle domain KCU58_04410 PF02875 Mur ligase family, glutamate ligase domain KCU58_04420 PF01569 PAP2 superfamily KCU58_04435 PF00480 ROK family KCU58_04445 PF00202 Aminotransferase class-III KCU58_04455 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KCU58_04455 PF00034 Cytochrome c KCU58_04475 PF00072 Response regulator receiver domain KCU58_04475 PF00196 Bacterial regulatory proteins, luxR family KCU58_04485 PF00202 Aminotransferase class-III KCU58_04495 PF02581 Thiamine monophosphate synthase KCU58_04500 PF00301 Rubredoxin KCU58_04505 PF13369 Transglutaminase-like superfamily KCU58_04515 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KCU58_04525 PF01812 5-formyltetrahydrofolate cyclo-ligase family KCU58_04535 PF05164 Cell division protein ZapA KCU58_04545 PF03707 Bacterial signalling protein N terminal repeat KCU58_04545 PF00563 EAL domain KCU58_04545 PF00990 Diguanylate cyclase, GGDEF domain KCU58_04550 PF03695 Uncharacterised protein family (UPF0149) KCU58_04555 PF05195 Aminopeptidase P, N-terminal domain KCU58_04555 PF00557 Metallopeptidase family M24 KCU58_04560 PF00557 Metallopeptidase family M24 KCU58_04575 PF17092 Penicillin-binding protein OB-like domain KCU58_04575 PF00912 Transglycosylase KCU58_04575 PF00905 Penicillin binding protein transpeptidase domain KCU58_04580 PF11104 Type IV pilus assembly protein PilM; KCU58_04590 PF04350 Pilus assembly protein, PilO KCU58_04595 PF04351 Pilus assembly protein, PilP KCU58_04600 PF00263 Bacterial type II and III secretion system protein KCU58_04600 PF03958 Bacterial type II/III secretion system short domain KCU58_04600 PF07660 Secretin and TonB N terminus short domain KCU58_04600 PF11741 AMIN domain KCU58_04605 PF07726 ATPase family associated with various cellular activities (AAA) KCU58_04605 PF17863 AAA lid domain KCU58_04610 PF01882 Protein of unknown function DUF58 KCU58_04620 PF13519 von Willebrand factor type A domain KCU58_04635 PF00375 Sodium:dicarboxylate symporter family KCU58_04640 PF00456 Transketolase, thiamine diphosphate binding domain KCU58_04640 PF02780 Transketolase, C-terminal domain KCU58_04640 PF02779 Transketolase, pyrimidine binding domain KCU58_04665 PF04225 Opacity-associated protein A LysM-like domain KCU58_04665 PF01551 Peptidase family M23 KCU58_04670 PF01476 LysM domain KCU58_04670 PF03734 L,D-transpeptidase catalytic domain KCU58_04695 PF00005 ABC transporter KCU58_04695 PF03459 TOBE domain KCU58_04700 PF00528 Binding-protein-dependent transport system inner membrane component KCU58_04710 PF00753 Metallo-beta-lactamase superfamily KCU58_04715 PF01022 Bacterial regulatory protein, arsR family KCU58_04735 PF03922 OmpW family KCU58_04740 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KCU58_04740 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KCU58_04760 PF00672 HAMP domain KCU58_04760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_04775 PF00162 Phosphoglycerate kinase KCU58_04780 PF13419 Haloacid dehalogenase-like hydrolase KCU58_04785 PF00224 Pyruvate kinase, barrel domain KCU58_04785 PF02887 Pyruvate kinase, alpha/beta domain KCU58_04790 PF00274 Fructose-bisphosphate aldolase class-I KCU58_04795 PF01661 Macro domain KCU58_04810 PF01156 Inosine-uridine preferring nucleoside hydrolase KCU58_04830 PF01546 Peptidase family M20/M25/M40 KCU58_04830 PF07687 Peptidase dimerisation domain KCU58_04835 PF00266 Aminotransferase class-V KCU58_04845 PF00291 Pyridoxal-phosphate dependent enzyme KCU58_04850 PF14824 Sirohaem biosynthesis protein central KCU58_04850 PF10414 Sirohaem synthase dimerisation region KCU58_04850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KCU58_04855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU58_04855 PF03466 LysR substrate binding domain KCU58_04865 PF00672 HAMP domain KCU58_04865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_04865 PF00512 His Kinase A (phospho-acceptor) domain KCU58_04865 PF01627 Hpt domain KCU58_04865 PF00072 Response regulator receiver domain KCU58_04870 PF03960 ArsC family KCU58_04900 PF01507 Phosphoadenosine phosphosulfate reductase family KCU58_04905 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KCU58_04905 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KCU58_04910 PF00667 FAD binding domain KCU58_04910 PF00258 Flavodoxin KCU58_04910 PF00175 Oxidoreductase NAD-binding domain KCU58_04915 PF01507 Phosphoadenosine phosphosulfate reductase family KCU58_04920 PF00009 Elongation factor Tu GTP binding domain KCU58_04925 PF00672 HAMP domain KCU58_04925 PF02203 Tar ligand binding domain homologue KCU58_04925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_04965 PF00588 SpoU rRNA Methylase family KCU58_04965 PF08032 RNA 2'-O ribose methyltransferase substrate binding KCU58_04985 PF00356 Bacterial regulatory proteins, lacI family KCU58_04995 PF01741 Large-conductance mechanosensitive channel, MscL KCU58_05000 PF01557 Fumarylacetoacetate (FAA) hydrolase family KCU58_05015 PF02080 TrkA-C domain KCU58_05015 PF03600 Citrate transporter KCU58_05020 PF02390 Putative methyltransferase KCU58_05025 PF05690 Thiazole biosynthesis protein ThiG KCU58_05030 PF02597 ThiS family KCU58_05030 PF05690 Thiazole biosynthesis protein ThiG KCU58_05050 PF00120 Glutamine synthetase, catalytic domain KCU58_05055 PF04204 Homoserine O-succinyltransferase KCU58_05060 PF01810 LysE type translocator KCU58_05065 PF07722 Peptidase C26 KCU58_05075 PF01053 Cys/Met metabolism PLP-dependent enzyme KCU58_05080 PF00266 Aminotransferase class-V KCU58_05105 PF05506 Domain of unknown function (DUF756) KCU58_05105 PF04185 Phosphoesterase family KCU58_05110 PF07715 TonB-dependent Receptor Plug Domain KCU58_05110 PF07660 Secretin and TonB N terminus short domain KCU58_05110 PF00593 TonB dependent receptor KCU58_05115 PF08443 RimK-like ATP-grasp domain KCU58_05115 PF18030 RimK PreATP-grasp domain KCU58_05125 PF00486 Transcriptional regulatory protein, C terminal KCU58_05125 PF00072 Response regulator receiver domain KCU58_05130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_05130 PF00512 His Kinase A (phospho-acceptor) domain KCU58_05130 PF00989 PAS fold KCU58_05130 PF11808 Phosphate regulon sensor protein PhoR KCU58_05135 PF01121 Dephospho-CoA kinase KCU58_05140 PF06750 Bacterial Peptidase A24 N-terminal domain KCU58_05140 PF01478 Type IV leader peptidase family KCU58_05145 PF00482 Type II secretion system (T2SS), protein F KCU58_05150 PF07963 Prokaryotic N-terminal methylation motif KCU58_05150 PF00114 Pilin (bacterial filament) KCU58_05155 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KCU58_05155 PF00437 Type II/IV secretion system protein KCU58_05170 PF02954 Bacterial regulatory protein, Fis family KCU58_05170 PF00072 Response regulator receiver domain KCU58_05170 PF00158 Sigma-54 interaction domain KCU58_05175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_05175 PF00512 His Kinase A (phospho-acceptor) domain KCU58_05180 PF08442 ATP-grasp domain KCU58_05180 PF00549 CoA-ligase KCU58_05185 PF00549 CoA-ligase KCU58_05185 PF02629 CoA binding domain KCU58_05205 PF02540 NAD synthase KCU58_05205 PF00795 Carbon-nitrogen hydrolase KCU58_05215 PF12867 DinB superfamily KCU58_05215 PF03781 Sulfatase-modifying factor enzyme 1 KCU58_05220 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KCU58_05230 PF00528 Binding-protein-dependent transport system inner membrane component KCU58_05235 PF00005 ABC transporter KCU58_05245 PF13525 Outer membrane lipoprotein KCU58_05250 PF00849 RNA pseudouridylate synthase KCU58_05255 PF02578 Multi-copper polyphenol oxidoreductase laccase KCU58_05270 PF01011 PQQ enzyme repeat KCU58_05280 PF00982 Glycosyltransferase family 20 KCU58_05285 PF00723 Glycosyl hydrolases family 15 KCU58_05290 PF02358 Trehalose-phosphatase KCU58_05300 PF07715 TonB-dependent Receptor Plug Domain KCU58_05300 PF00593 TonB dependent receptor KCU58_05335 PF00004 ATPase family associated with various cellular activities (AAA) KCU58_05335 PF07724 AAA domain (Cdc48 subfamily) KCU58_05335 PF17871 AAA lid domain KCU58_05335 PF02861 Clp amino terminal domain, pathogenicity island component KCU58_05335 PF10431 C-terminal, D2-small domain, of ClpB protein KCU58_05350 PF01053 Cys/Met metabolism PLP-dependent enzyme KCU58_05355 PF07769 psiF repeat KCU58_05360 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KCU58_05360 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KCU58_05365 PF06276 Ferric iron reductase FhuF-like transporter KCU58_05365 PF04183 IucA / IucC family KCU58_05370 PF07690 Major Facilitator Superfamily KCU58_05375 PF06276 Ferric iron reductase FhuF-like transporter KCU58_05375 PF04183 IucA / IucC family KCU58_05385 PF07660 Secretin and TonB N terminus short domain KCU58_05385 PF00593 TonB dependent receptor KCU58_05385 PF07715 TonB-dependent Receptor Plug Domain KCU58_05395 PF00999 Sodium/hydrogen exchanger family KCU58_05395 PF02254 TrkA-N domain KCU58_05410 PF07715 TonB-dependent Receptor Plug Domain KCU58_05410 PF00593 TonB dependent receptor KCU58_05425 PF02534 Type IV secretory system Conjugative DNA transfer KCU58_05430 PF00561 alpha/beta hydrolase fold KCU58_05445 PF00293 NUDIX domain KCU58_05450 PF01367 5'-3' exonuclease, C-terminal SAM fold KCU58_05450 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KCU58_05450 PF00476 DNA polymerase family A KCU58_05450 PF01612 3'-5' exonuclease KCU58_05470 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KCU58_05470 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KCU58_05490 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KCU58_05495 PF02233 NAD(P) transhydrogenase beta subunit KCU58_05510 PF01063 Amino-transferase class IV KCU58_05515 PF00082 Subtilase family KCU58_05515 PF04151 Bacterial pre-peptidase C-terminal domain KCU58_05545 PF03358 NADPH-dependent FMN reductase KCU58_05550 PF03631 Virulence factor BrkB KCU58_05555 PF08534 Redoxin KCU58_05560 PF00708 Acylphosphatase KCU58_05565 PF03976 Polyphosphate kinase 2 (PPK2) KCU58_05575 PF00994 Probable molybdopterin binding domain KCU58_05635 PF03377 TAL effector repeat KCU58_05645 PF03377 TAL effector repeat KCU58_05655 PF04717 Type VI secretion system, phage-baseplate injector KCU58_05685 PF14220 Domain of unknown function (DUF4329) KCU58_05685 PF03527 RHS protein KCU58_05685 PF05593 RHS Repeat KCU58_05720 PF06761 Intracellular multiplication and human macrophage-killing KCU58_05720 PF14331 ImcF-related N-terminal domain KCU58_05720 PF06744 Type VI secretion protein IcmF C-terminal KCU58_05730 PF00691 OmpA family KCU58_05730 PF04972 BON domain KCU58_05740 PF05360 yiaA/B two helix domain KCU58_05745 PF06715 Gp5 C-terminal repeat (3 copies) KCU58_05745 PF04717 Type VI secretion system, phage-baseplate injector KCU58_05830 PF00182 Chitinase class I KCU58_05835 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KCU58_05835 PF04717 Type VI secretion system, phage-baseplate injector KCU58_05835 PF13296 Putative type VI secretion system Rhs element Vgr KCU58_05860 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 KCU58_05865 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KCU58_05880 PF05947 Type VI secretion system, TssF KCU58_05890 PF10431 C-terminal, D2-small domain, of ClpB protein KCU58_05890 PF17871 AAA lid domain KCU58_05890 PF07724 AAA domain (Cdc48 subfamily) KCU58_05890 PF00004 ATPase family associated with various cellular activities (AAA) KCU58_05900 PF04717 Type VI secretion system, phage-baseplate injector KCU58_05990 PF01301 Glycosyl hydrolases family 35 KCU58_05995 PF17678 Glycosyl hydrolase family 92 N-terminal domain KCU58_05995 PF07971 Glycosyl hydrolase family 92 KCU58_06015 PF00933 Glycosyl hydrolase family 3 N terminal domain KCU58_06015 PF01915 Glycosyl hydrolase family 3 C-terminal domain KCU58_06015 PF07691 PA14 domain KCU58_06015 PF14310 Fibronectin type III-like domain KCU58_06025 PF00728 Glycosyl hydrolase family 20, catalytic domain KCU58_06025 PF07691 PA14 domain KCU58_06025 PF02838 Glycosyl hydrolase family 20, domain 2 KCU58_06030 PF00704 Glycosyl hydrolases family 18 KCU58_06030 PF01476 LysM domain KCU58_06050 PF02685 Glucokinase KCU58_06060 PF04452 RNA methyltransferase KCU58_06065 PF00202 Aminotransferase class-III KCU58_06070 PF00293 NUDIX domain KCU58_06075 PF00459 Inositol monophosphatase family KCU58_06080 PF03819 MazG nucleotide pyrophosphohydrolase domain KCU58_06085 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KCU58_06095 PF01145 SPFH domain / Band 7 family KCU58_06095 PF16200 C-terminal region of band_7 KCU58_06105 PF01571 Aminomethyltransferase folate-binding domain KCU58_06105 PF08669 Glycine cleavage T-protein C-terminal barrel domain KCU58_06110 PF01597 Glycine cleavage H-protein KCU58_06140 PF05199 GMC oxidoreductase KCU58_06140 PF00732 GMC oxidoreductase KCU58_06160 PF00067 Cytochrome P450 KCU58_06165 PF00067 Cytochrome P450 KCU58_06170 PF00067 Cytochrome P450 KCU58_06185 PF00067 Cytochrome P450 KCU58_06190 PF00348 Polyprenyl synthetase KCU58_06205 PF01070 FMN-dependent dehydrogenase KCU58_06210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KCU58_06210 PF02770 Acyl-CoA dehydrogenase, middle domain KCU58_06210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KCU58_06210 PF09317 Domain of unknown function (DUF1974) KCU58_06220 PF00440 Bacterial regulatory proteins, tetR family KCU58_06230 PF07715 TonB-dependent Receptor Plug Domain KCU58_06230 PF00593 TonB dependent receptor KCU58_06240 PF01430 Hsp33 protein KCU58_06245 PF00912 Transglycosylase KCU58_06250 PF00535 Glycosyl transferase family 2 KCU58_06255 PF00571 CBS domain KCU58_06260 PF05170 AsmA family KCU58_06265 PF03006 Haemolysin-III related KCU58_06270 PF00009 Elongation factor Tu GTP binding domain KCU58_06270 PF16658 Class II release factor RF3, C-terminal domain KCU58_06280 PF00561 alpha/beta hydrolase fold KCU58_06285 PF01053 Cys/Met metabolism PLP-dependent enzyme KCU58_06290 PF00696 Amino acid kinase family KCU58_06290 PF00742 Homoserine dehydrogenase KCU58_06290 PF03447 Homoserine dehydrogenase, NAD binding domain KCU58_06295 PF08386 TAP-like protein KCU58_06295 PF00561 alpha/beta hydrolase fold KCU58_06300 PF00990 Diguanylate cyclase, GGDEF domain KCU58_06305 PF03315 Serine dehydratase beta chain KCU58_06305 PF03313 Serine dehydratase alpha chain KCU58_06320 PF01292 Prokaryotic cytochrome b561 KCU58_06330 PF17149 Periplasmic sensor domain found in signal transduction proteins KCU58_06330 PF00672 HAMP domain KCU58_06330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_06330 PF00512 His Kinase A (phospho-acceptor) domain KCU58_06330 PF01627 Hpt domain KCU58_06330 PF00072 Response regulator receiver domain KCU58_06335 PF00512 His Kinase A (phospho-acceptor) domain KCU58_06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_06335 PF00072 Response regulator receiver domain KCU58_06335 PF17149 Periplasmic sensor domain found in signal transduction proteins KCU58_06335 PF00672 HAMP domain KCU58_06335 PF01627 Hpt domain KCU58_06340 PF07690 Major Facilitator Superfamily KCU58_06345 PF01208 Uroporphyrinogen decarboxylase (URO-D) KCU58_06355 PF13533 Biotin-lipoyl like KCU58_06360 PF00873 AcrB/AcrD/AcrF family KCU58_06365 PF02321 Outer membrane efflux protein KCU58_06370 PF01761 3-dehydroquinate synthase KCU58_06375 PF01202 Shikimate kinase KCU58_06380 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KCU58_06380 PF01243 Pyridoxamine 5'-phosphate oxidase KCU58_06385 PF00583 Acetyltransferase (GNAT) family KCU58_06395 PF07690 Major Facilitator Superfamily KCU58_06400 PF00376 MerR family regulatory protein KCU58_06400 PF09278 MerR, DNA binding KCU58_06410 PF03807 NADP oxidoreductase coenzyme F420-dependent KCU58_06410 PF14748 Pyrroline-5-carboxylate reductase dimerisation KCU58_06420 PF01168 Alanine racemase, N-terminal domain KCU58_06425 PF00437 Type II/IV secretion system protein KCU58_06430 PF00437 Type II/IV secretion system protein KCU58_06435 PF13302 Acetyltransferase (GNAT) domain KCU58_06435 PF03352 Methyladenine glycosylase KCU58_06435 PF00117 Glutamine amidotransferase class-I KCU58_06435 PF00958 GMP synthase C terminal domain KCU58_06435 PF13673 Acetyltransferase (GNAT) domain KCU58_06445 PF02622 Uncharacterized ACR, COG1678 KCU58_06450 PF03652 Holliday junction resolvase KCU58_06455 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KCU58_06455 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KCU58_06475 PF00672 HAMP domain KCU58_06475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_06475 PF02203 Tar ligand binding domain homologue KCU58_06485 PF00324 Amino acid permease KCU58_06490 PF03600 Citrate transporter KCU58_06505 PF00571 CBS domain KCU58_06505 PF01769 Divalent cation transporter KCU58_06505 PF03448 MgtE intracellular N domain KCU58_06510 PF05524 PEP-utilising enzyme, N-terminal KCU58_06510 PF00391 PEP-utilising enzyme, mobile domain KCU58_06510 PF02896 PEP-utilising enzyme, TIM barrel domain KCU58_06515 PF00381 PTS HPr component phosphorylation site KCU58_06525 PF03668 P-loop ATPase protein family KCU58_06530 PF07475 HPr Serine kinase C-terminal domain KCU58_06530 PF02603 HPr Serine kinase N terminus KCU58_06535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KCU58_06540 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KCU58_06545 PF04552 Sigma-54, DNA binding domain KCU58_06545 PF04963 Sigma-54 factor, core binding domain KCU58_06545 PF00309 Sigma-54 factor, Activator interacting domain (AID) KCU58_06550 PF00005 ABC transporter KCU58_06570 PF00571 CBS domain KCU58_06570 PF01380 SIS domain KCU58_06580 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KCU58_06610 PF00551 Formyl transferase KCU58_06625 PF00586 AIR synthase related protein, N-terminal domain KCU58_06625 PF02769 AIR synthase related protein, C-terminal domain KCU58_06635 PF01594 AI-2E family transporter KCU58_06640 PF00308 Bacterial dnaA protein KCU58_06645 PF00483 Nucleotidyl transferase KCU58_06650 PF01636 Phosphotransferase enzyme family KCU58_06675 PF00072 Response regulator receiver domain KCU58_06675 PF00486 Transcriptional regulatory protein, C terminal KCU58_06685 PF00258 Flavodoxin KCU58_06685 PF00667 FAD binding domain KCU58_06685 PF00175 Oxidoreductase NAD-binding domain KCU58_06690 PF02424 ApbE family KCU58_06710 PF13640 2OG-Fe(II) oxygenase superfamily KCU58_06710 PF18331 PKHD-type hydroxylase C-terminal domain KCU58_06715 PF07715 TonB-dependent Receptor Plug Domain KCU58_06715 PF00593 TonB dependent receptor KCU58_06720 PF00355 Rieske [2Fe-2S] domain KCU58_06730 PF00266 Aminotransferase class-V KCU58_06735 PF01458 Uncharacterized protein family (UPF0051) KCU58_06740 PF00005 ABC transporter KCU58_06745 PF01458 Uncharacterized protein family (UPF0051) KCU58_06760 PF01965 DJ-1/PfpI family KCU58_06775 PF08525 Opacity-associated protein A N-terminal motif KCU58_06775 PF01476 LysM domain KCU58_06775 PF01551 Peptidase family M23 KCU58_06790 PF02566 OsmC-like protein KCU58_06800 PF02567 Phenazine biosynthesis-like protein KCU58_06805 PF00696 Amino acid kinase family KCU58_06805 PF01842 ACT domain KCU58_06820 PF08245 Mur ligase middle domain KCU58_06830 PF00348 Polyprenyl synthetase KCU58_06835 PF00436 Single-strand binding protein family KCU58_06855 PF00854 POT family KCU58_06860 PF03169 OPT oligopeptide transporter protein KCU58_06865 PF07676 WD40-like Beta Propeller Repeat KCU58_06865 PF00326 Prolyl oligopeptidase family KCU58_06865 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KCU58_06890 PF13419 Haloacid dehalogenase-like hydrolase KCU58_06895 PF04328 Selenoprotein, putative KCU58_06900 PF02554 Carbon starvation protein CstA KCU58_06900 PF13722 5TM C-terminal transporter carbon starvation CstA KCU58_06915 PF04493 Endonuclease V KCU58_06920 PF00300 Histidine phosphatase superfamily (branch 1) KCU58_06930 PF07944 Beta-L-arabinofuranosidase, GH127 KCU58_06940 PF12833 Helix-turn-helix domain KCU58_06940 PF02311 AraC-like ligand binding domain KCU58_06945 PF13333 Integrase core domain KCU58_06945 PF00665 Integrase core domain KCU58_06945 PF13276 HTH-like domain KCU58_06955 PF00072 Response regulator receiver domain KCU58_06955 PF01339 CheB methylesterase KCU58_06960 PF03705 CheR methyltransferase, all-alpha domain KCU58_06960 PF01739 CheR methyltransferase, SAM binding domain KCU58_06965 PF00563 EAL domain KCU58_06965 PF00990 Diguanylate cyclase, GGDEF domain KCU58_06965 PF03707 Bacterial signalling protein N terminal repeat KCU58_06970 PF01584 CheW-like domain KCU58_06975 PF12729 Four helix bundle sensory module for signal transduction KCU58_06975 PF00672 HAMP domain KCU58_06975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_06980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_06980 PF02203 Tar ligand binding domain homologue KCU58_06980 PF00672 HAMP domain KCU58_06985 PF02203 Tar ligand binding domain homologue KCU58_06985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_06985 PF00672 HAMP domain KCU58_06990 PF01584 CheW-like domain KCU58_06990 PF02895 Signal transducing histidine kinase, homodimeric domain KCU58_06990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_06990 PF01627 Hpt domain KCU58_07000 PF17757 UvrB interaction domain KCU58_07000 PF00271 Helicase conserved C-terminal domain KCU58_07000 PF03461 TRCF domain KCU58_07000 PF02559 CarD-like/TRCF domain KCU58_07000 PF00270 DEAD/DEAH box helicase KCU58_07020 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KCU58_07030 PF00672 HAMP domain KCU58_07030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_07030 PF00512 His Kinase A (phospho-acceptor) domain KCU58_07060 PF00749 tRNA synthetases class I (E and Q), catalytic domain KCU58_07065 PF01475 Ferric uptake regulator family KCU58_07070 PF07690 Major Facilitator Superfamily KCU58_07080 PF01483 Proprotein convertase P-domain KCU58_07080 PF00082 Subtilase family KCU58_07090 PF00561 alpha/beta hydrolase fold KCU58_07100 PF12804 MobA-like NTP transferase domain KCU58_07105 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KCU58_07105 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KCU58_07110 PF00941 FAD binding domain in molybdopterin dehydrogenase KCU58_07110 PF03450 CO dehydrogenase flavoprotein C-terminal domain KCU58_07115 PF10518 TAT (twin-arginine translocation) pathway signal sequence KCU58_07115 PF01799 [2Fe-2S] binding domain KCU58_07115 PF00111 2Fe-2S iron-sulfur cluster binding domain KCU58_07130 PF00593 TonB dependent receptor KCU58_07130 PF07715 TonB-dependent Receptor Plug Domain KCU58_07145 PF08240 Alcohol dehydrogenase GroES-like domain KCU58_07145 PF00107 Zinc-binding dehydrogenase KCU58_07150 PF00654 Voltage gated chloride channel KCU58_07160 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KCU58_07160 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KCU58_07165 PF00730 HhH-GPD superfamily base excision DNA repair protein KCU58_07165 PF02805 Metal binding domain of Ada KCU58_07165 PF12833 Helix-turn-helix domain KCU58_07165 PF06029 AlkA N-terminal domain KCU58_07200 PF01494 FAD binding domain KCU58_07220 PF03880 DbpA RNA binding domain KCU58_07220 PF00271 Helicase conserved C-terminal domain KCU58_07220 PF00270 DEAD/DEAH box helicase KCU58_07225 PF01479 S4 domain KCU58_07225 PF00849 RNA pseudouridylate synthase KCU58_07230 PF00990 Diguanylate cyclase, GGDEF domain KCU58_07240 PF03812 2-keto-3-deoxygluconate permease KCU58_07250 PF03737 Aldolase/RraA KCU58_07255 PF00144 Beta-lactamase KCU58_07270 PF00005 ABC transporter KCU58_07270 PF00664 ABC transporter transmembrane region KCU58_07285 PF03377 TAL effector repeat KCU58_07295 PF03377 TAL effector repeat KCU58_07365 PF03653 Uncharacterised protein family (UPF0093) KCU58_07375 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KCU58_07380 PF01336 OB-fold nucleic acid binding domain KCU58_07380 PF07733 Bacterial DNA polymerase III alpha NTPase domain KCU58_07380 PF02811 PHP domain KCU58_07380 PF14579 Helix-hairpin-helix motif KCU58_07380 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KCU58_07385 PF01351 Ribonuclease HII KCU58_07390 PF02684 Lipid-A-disaccharide synthetase KCU58_07395 PF00132 Bacterial transferase hexapeptide (six repeats) KCU58_07395 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KCU58_07400 PF07977 FabA-like domain KCU58_07405 PF00132 Bacterial transferase hexapeptide (six repeats) KCU58_07405 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KCU58_07410 PF07244 Surface antigen variable number repeat KCU58_07410 PF01103 Surface antigen KCU58_07415 PF02163 Peptidase family M50 KCU58_07415 PF17820 PDZ domain KCU58_07420 PF13288 DXP reductoisomerase C-terminal domain KCU58_07420 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KCU58_07420 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KCU58_07430 PF01255 Putative undecaprenyl diphosphate synthase KCU58_07435 PF01765 Ribosome recycling factor KCU58_07440 PF00696 Amino acid kinase family KCU58_07445 PF00990 Diguanylate cyclase, GGDEF domain KCU58_07450 PF00889 Elongation factor TS KCU58_07455 PF00318 Ribosomal protein S2 KCU58_07490 PF00557 Metallopeptidase family M24 KCU58_07495 PF01966 HD domain KCU58_07495 PF08335 GlnD PII-uridylyltransferase KCU58_07495 PF01909 Nucleotidyltransferase domain KCU58_07500 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KCU58_07500 PF14602 Hexapeptide repeat of succinyl-transferase KCU58_07500 PF00132 Bacterial transferase hexapeptide (six repeats) KCU58_07505 PF03960 ArsC family KCU58_07510 PF07687 Peptidase dimerisation domain KCU58_07510 PF01546 Peptidase family M20/M25/M40 KCU58_07520 PF00733 Asparagine synthase KCU58_07520 PF13537 Glutamine amidotransferase domain KCU58_07530 PF01804 Penicillin amidase KCU58_07535 PF00210 Ferritin-like domain KCU58_07540 PF03989 DNA gyrase C-terminal domain, beta-propeller KCU58_07540 PF00521 DNA gyrase/topoisomerase IV, subunit A KCU58_07555 PF02321 Outer membrane efflux protein KCU58_07560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KCU58_07560 PF00529 HlyD membrane-fusion protein of T1SS KCU58_07565 PF07690 Major Facilitator Superfamily KCU58_07590 PF06903 VirK protein KCU58_07600 PF00575 S1 RNA binding domain KCU58_07600 PF08206 Ribonuclease B OB domain KCU58_07600 PF08461 Ribonuclease R winged-helix domain KCU58_07600 PF17876 Cold shock domain KCU58_07600 PF00773 RNB domain KCU58_07610 PF00588 SpoU rRNA Methylase family KCU58_07610 PF08032 RNA 2'-O ribose methyltransferase substrate binding KCU58_07630 PF00929 Exonuclease KCU58_07640 PF05114 Protein of unknown function (DUF692) KCU58_07650 PF01895 PhoU domain KCU58_07655 PF00005 ABC transporter KCU58_07660 PF00528 Binding-protein-dependent transport system inner membrane component KCU58_07665 PF00528 Binding-protein-dependent transport system inner membrane component KCU58_07670 PF12849 PBP superfamily domain KCU58_07675 PF12849 PBP superfamily domain KCU58_07680 PF07396 Phosphate-selective porin O and P KCU58_07690 PF00484 Carbonic anhydrase KCU58_07695 PF01740 STAS domain KCU58_07695 PF00916 Sulfate permease family KCU58_07705 PF10576 Iron-sulfur binding domain of endonuclease III KCU58_07705 PF00633 Helix-hairpin-helix motif KCU58_07705 PF00730 HhH-GPD superfamily base excision DNA repair protein KCU58_07715 PF00378 Enoyl-CoA hydratase/isomerase KCU58_07720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KCU58_07720 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KCU58_07725 PF00293 NUDIX domain KCU58_07730 PF00581 Rhodanese-like domain KCU58_07765 PF10672 S-adenosylmethionine-dependent methyltransferase KCU58_07765 PF02926 THUMP domain KCU58_07765 PF01170 Putative RNA methylase family UPF0020 KCU58_07775 PF00512 His Kinase A (phospho-acceptor) domain KCU58_07775 PF00072 Response regulator receiver domain KCU58_07775 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KCU58_07775 PF00672 HAMP domain KCU58_07775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_07775 PF01627 Hpt domain KCU58_07780 PF04286 Protein of unknown function (DUF445) KCU58_07795 PF00171 Aldehyde dehydrogenase family KCU58_07800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KCU58_07800 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KCU58_07805 PF00202 Aminotransferase class-III KCU58_07810 PF01381 Helix-turn-helix KCU58_07810 PF07883 Cupin domain KCU58_07815 PF00171 Aldehyde dehydrogenase family KCU58_07830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU58_07830 PF03459 TOBE domain KCU58_07835 PF07690 Major Facilitator Superfamily KCU58_07840 PF02634 FdhD/NarQ family KCU58_07845 PF00384 Molybdopterin oxidoreductase KCU58_07855 PF00818 Ice nucleation protein repeat KCU58_07860 PF00083 Sugar (and other) transporter KCU58_07860 PF07690 Major Facilitator Superfamily KCU58_07865 PF00990 Diguanylate cyclase, GGDEF domain KCU58_07865 PF00072 Response regulator receiver domain KCU58_07870 PF01266 FAD dependent oxidoreductase KCU58_07875 PF00120 Glutamine synthetase, catalytic domain KCU58_07880 PF07722 Peptidase C26 KCU58_07885 PF00120 Glutamine synthetase, catalytic domain KCU58_07890 PF00202 Aminotransferase class-III KCU58_07895 PF13416 Bacterial extracellular solute-binding protein KCU58_07900 PF13416 Bacterial extracellular solute-binding protein KCU58_07905 PF13533 Biotin-lipoyl like KCU58_07910 PF07690 Major Facilitator Superfamily KCU58_07915 PF02321 Outer membrane efflux protein KCU58_07920 PF00005 ABC transporter KCU58_07920 PF08402 TOBE domain KCU58_07925 PF00528 Binding-protein-dependent transport system inner membrane component KCU58_07930 PF00528 Binding-protein-dependent transport system inner membrane component KCU58_07935 PF00171 Aldehyde dehydrogenase family KCU58_07950 PF00571 CBS domain KCU58_07950 PF03471 Transporter associated domain KCU58_07960 PF02130 Uncharacterized protein family UPF0054 KCU58_07965 PF02562 PhoH-like protein KCU58_07970 PF00919 Uncharacterized protein family UPF0004 KCU58_07970 PF04055 Radical SAM superfamily KCU58_07970 PF01938 TRAM domain KCU58_07975 PF00043 Glutathione S-transferase, C-terminal domain KCU58_07975 PF02798 Glutathione S-transferase, N-terminal domain KCU58_07980 PF01464 Transglycosylase SLT domain KCU58_07985 PF00355 Rieske [2Fe-2S] domain KCU58_07985 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal KCU58_07990 PF00032 Cytochrome b(C-terminal)/b6/petD KCU58_07990 PF00033 Cytochrome b/b6/petB KCU58_08000 PF02167 Cytochrome C1 family KCU58_08005 PF02798 Glutathione S-transferase, N-terminal domain KCU58_08005 PF00043 Glutathione S-transferase, C-terminal domain KCU58_08010 PF04386 Stringent starvation protein B KCU58_08025 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KCU58_08025 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KCU58_08035 PF00731 AIR carboxylase KCU58_08040 PF02222 ATP-grasp domain KCU58_08040 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KCU58_08045 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KCU58_08045 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KCU58_08050 PF00462 Glutaredoxin KCU58_08055 PF00106 short chain dehydrogenase KCU58_08060 PF01914 MarC family integral membrane protein KCU58_08065 PF00593 TonB dependent receptor KCU58_08070 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases KCU58_08070 PF03641 Possible lysine decarboxylase KCU58_08070 PF11892 Domain of unknown function (DUF3412) KCU58_08075 PF07694 5TMR of 5TMR-LYT KCU58_08075 PF06580 Histidine kinase KCU58_08080 PF07963 Prokaryotic N-terminal methylation motif KCU58_08080 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor KCU58_08100 PF05567 Neisseria PilC beta-propeller domain KCU58_08105 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor KCU58_08105 PF07963 Prokaryotic N-terminal methylation motif KCU58_08115 PF07963 Prokaryotic N-terminal methylation motif KCU58_08115 PF00114 Pilin (bacterial filament) KCU58_08120 PF12344 Ultra-violet resistance protein B KCU58_08120 PF00271 Helicase conserved C-terminal domain KCU58_08120 PF04851 Type III restriction enzyme, res subunit KCU58_08120 PF02151 UvrB/uvrC motif KCU58_08120 PF17757 UvrB interaction domain KCU58_08140 PF00873 AcrB/AcrD/AcrF family KCU58_08145 PF00529 HlyD membrane-fusion protein of T1SS KCU58_08145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KCU58_08155 PF05088 Bacterial NAD-glutamate dehydrogenase KCU58_08170 PF03377 TAL effector repeat KCU58_08175 PF00665 Integrase core domain KCU58_08175 PF13333 Integrase core domain KCU58_08175 PF13276 HTH-like domain KCU58_08180 PF01527 Transposase KCU58_08190 PF01513 ATP-NAD kinase KCU58_08215 PF08411 Exonuclease C-terminal KCU58_08215 PF00929 Exonuclease KCU58_08220 PF01494 FAD binding domain KCU58_08225 PF00266 Aminotransferase class-V KCU58_08235 PF06052 3-hydroxyanthranilic acid dioxygenase KCU58_08240 PF00484 Carbonic anhydrase KCU58_08285 PF00072 Response regulator receiver domain KCU58_08285 PF00196 Bacterial regulatory proteins, luxR family KCU58_08305 PF01336 OB-fold nucleic acid binding domain KCU58_08305 PF00152 tRNA synthetases class II (D, K and N) KCU58_08310 PF01521 Iron-sulphur cluster biosynthesis KCU58_08320 PF01250 Ribosomal protein S6 KCU58_08325 PF01084 Ribosomal protein S18 KCU58_08330 PF01281 Ribosomal protein L9, N-terminal domain KCU58_08330 PF03948 Ribosomal protein L9, C-terminal domain KCU58_08335 PF02463 RecF/RecN/SMC N terminal domain KCU58_08340 PF04354 ZipA, C-terminal FtsZ-binding domain KCU58_08345 PF00155 Aminotransferase class I and II KCU58_08350 PF01653 NAD-dependent DNA ligase adenylation domain KCU58_08350 PF12826 Helix-hairpin-helix motif KCU58_08350 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KCU58_08350 PF03120 NAD-dependent DNA ligase OB-fold domain KCU58_08350 PF00533 BRCA1 C Terminus (BRCT) domain KCU58_08355 PF00152 tRNA synthetases class II (D, K and N) KCU58_08365 PF01008 Initiation factor 2 subunit family KCU58_08370 PF00521 DNA gyrase/topoisomerase IV, subunit A KCU58_08370 PF03989 DNA gyrase C-terminal domain, beta-propeller KCU58_08385 PF00440 Bacterial regulatory proteins, tetR family KCU58_08400 PF17391 Urocanase N-terminal domain KCU58_08400 PF01175 Urocanase Rossmann-like domain KCU58_08400 PF17392 Urocanase C-terminal domain KCU58_08410 PF00221 Aromatic amino acid lyase KCU58_08415 PF07969 Amidohydrolase family KCU58_08430 PF00106 short chain dehydrogenase KCU58_08465 PF01794 Ferric reductase like transmembrane component KCU58_08470 PF00174 Oxidoreductase molybdopterin binding domain KCU58_08475 PF00266 Aminotransferase class-V KCU58_08480 PF00800 Prephenate dehydratase KCU58_08480 PF01842 ACT domain KCU58_08480 PF01817 Chorismate mutase type II KCU58_08485 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KCU58_08495 PF03544 Gram-negative bacterial TonB protein C-terminal KCU58_08500 PF02403 Seryl-tRNA synthetase N-terminal domain KCU58_08500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KCU58_08505 PF03466 LysR substrate binding domain KCU58_08505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU58_08520 PF13276 HTH-like domain KCU58_08520 PF13333 Integrase core domain KCU58_08520 PF00665 Integrase core domain KCU58_08525 PF01527 Transposase KCU58_08555 PF12704 MacB-like periplasmic core domain KCU58_08555 PF00005 ABC transporter KCU58_08555 PF02687 FtsX-like permease family KCU58_08570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_08570 PF00512 His Kinase A (phospho-acceptor) domain KCU58_08575 PF00072 Response regulator receiver domain KCU58_08575 PF00486 Transcriptional regulatory protein, C terminal KCU58_08585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KCU58_08590 PF00294 pfkB family carbohydrate kinase KCU58_08595 PF00391 PEP-utilising enzyme, mobile domain KCU58_08595 PF05524 PEP-utilising enzyme, N-terminal KCU58_08595 PF02896 PEP-utilising enzyme, TIM barrel domain KCU58_08595 PF00381 PTS HPr component phosphorylation site KCU58_08595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KCU58_08600 PF00356 Bacterial regulatory proteins, lacI family KCU58_08610 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KCU58_08610 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KCU58_08610 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KCU58_08615 PF01645 Conserved region in glutamate synthase KCU58_08620 PF00563 EAL domain KCU58_08620 PF03707 Bacterial signalling protein N terminal repeat KCU58_08620 PF00990 Diguanylate cyclase, GGDEF domain KCU58_08630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KCU58_08640 PF17773 UPF0176 acylphosphatase like domain KCU58_08640 PF00581 Rhodanese-like domain KCU58_08650 PF00296 Luciferase-like monooxygenase KCU58_08665 PF01595 Cyclin M transmembrane N-terminal domain KCU58_08665 PF00571 CBS domain KCU58_08665 PF03471 Transporter associated domain KCU58_08675 PF01384 Phosphate transporter family KCU58_08685 PF00204 DNA gyrase B KCU58_08685 PF00986 DNA gyrase B subunit, carboxyl terminus KCU58_08685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_08685 PF01751 Toprim domain KCU58_08695 PF06418 CTP synthase N-terminus KCU58_08695 PF00117 Glutamine amidotransferase class-I KCU58_08705 PF00793 DAHP synthetase I family KCU58_08710 PF03952 Enolase, N-terminal domain KCU58_08710 PF00113 Enolase, C-terminal TIM barrel domain KCU58_08715 PF04977 Septum formation initiator KCU58_08720 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KCU58_08725 PF02542 YgbB family KCU58_08730 PF01142 tRNA pseudouridine synthase D (TruD) KCU58_08735 PF01713 Smr domain KCU58_08740 PF01975 Survival protein SurE KCU58_08750 PF09335 SNARE associated Golgi protein KCU58_08755 PF01476 LysM domain KCU58_08755 PF01551 Peptidase family M23 KCU58_08765 PF01985 CRS1 / YhbY (CRM) domain KCU58_08770 PF01728 FtsJ-like methyltransferase KCU58_08775 PF01434 Peptidase family M41 KCU58_08775 PF00004 ATPase family associated with various cellular activities (AAA) KCU58_08775 PF17862 AAA+ lid domain KCU58_08775 PF06480 FtsH Extracellular KCU58_08780 PF00809 Pterin binding enzyme KCU58_08790 PF17209 Hfq protein KCU58_08795 PF16360 GTP-binding GTPase Middle Region KCU58_08795 PF13167 GTP-binding GTPase N-terminal KCU58_08795 PF01926 50S ribosome-binding GTPase KCU58_08800 PF02464 Competence-damaged protein KCU58_08805 PF03109 ABC1 family KCU58_08810 PF00717 Peptidase S24-like KCU58_08810 PF01726 LexA DNA binding domain KCU58_08815 PF00154 recA bacterial DNA recombination protein KCU58_08820 PF02631 RecX family KCU58_08825 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KCU58_08825 PF01411 tRNA synthetases class II (A) KCU58_08825 PF02272 DHHA1 domain KCU58_08830 PF02599 Global regulator protein family KCU58_08850 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KCU58_08850 PF00128 Alpha amylase, catalytic domain KCU58_08855 PF17954 Quercetinase C-terminal cupin domain KCU58_08855 PF02678 Pirin KCU58_08860 PF03466 LysR substrate binding domain KCU58_08860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU58_08880 PF02581 Thiamine monophosphate synthase KCU58_08880 PF08543 Phosphomethylpyrimidine kinase KCU58_08885 PF14706 Transposase DNA-binding KCU58_08885 PF02281 Transposase Tn5 dimerisation domain KCU58_08885 PF01609 Transposase DDE domain KCU58_08910 PF03377 TAL effector repeat KCU58_08925 PF13638 PIN domain KCU58_08925 PF02562 PhoH-like protein KCU58_08930 PF00578 AhpC/TSA family KCU58_08940 PF00701 Dihydrodipicolinate synthetase family KCU58_08950 PF00037 4Fe-4S binding domain KCU58_08950 PF11953 Domain of unknown function (DUF3470) KCU58_08955 PF05035 2-keto-3-deoxy-galactonokinase KCU58_08960 PF08450 SMP-30/Gluconolactonase/LRE-like region KCU58_08965 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KCU58_08965 PF13378 Enolase C-terminal domain-like KCU58_08970 PF01081 KDPG and KHG aldolase KCU58_08975 PF03466 LysR substrate binding domain KCU58_08975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU58_08995 PF01336 OB-fold nucleic acid binding domain KCU58_08995 PF00152 tRNA synthetases class II (D, K and N) KCU58_09000 PF00072 Response regulator receiver domain KCU58_09005 PF00512 His Kinase A (phospho-acceptor) domain KCU58_09005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_09005 PF01627 Hpt domain KCU58_09005 PF00072 Response regulator receiver domain KCU58_09010 PF00378 Enoyl-CoA hydratase/isomerase KCU58_09015 PF13193 AMP-binding enzyme C-terminal domain KCU58_09015 PF00501 AMP-binding enzyme KCU58_09025 PF00694 Aconitase C-terminal domain KCU58_09025 PF00330 Aconitase family (aconitate hydratase) KCU58_09040 PF06434 Aconitate hydratase 2 N-terminus KCU58_09040 PF00330 Aconitase family (aconitate hydratase) KCU58_09040 PF11791 Aconitate B N-terminal domain KCU58_09060 PF03707 Bacterial signalling protein N terminal repeat KCU58_09060 PF00563 EAL domain KCU58_09060 PF00990 Diguanylate cyclase, GGDEF domain KCU58_09065 PF01339 CheB methylesterase KCU58_09065 PF00072 Response regulator receiver domain KCU58_09070 PF03975 CheD chemotactic sensory transduction KCU58_09075 PF03705 CheR methyltransferase, all-alpha domain KCU58_09075 PF01739 CheR methyltransferase, SAM binding domain KCU58_09080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_09080 PF02203 Tar ligand binding domain homologue KCU58_09080 PF00672 HAMP domain KCU58_09090 PF02203 Tar ligand binding domain homologue KCU58_09090 PF00672 HAMP domain KCU58_09090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_09100 PF01584 CheW-like domain KCU58_09105 PF07317 Flagellar regulator YcgR KCU58_09105 PF07238 PilZ domain KCU58_09110 PF02203 Tar ligand binding domain homologue KCU58_09110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_09110 PF00672 HAMP domain KCU58_09120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_09120 PF00672 HAMP domain KCU58_09120 PF02203 Tar ligand binding domain homologue KCU58_09125 PF02203 Tar ligand binding domain homologue KCU58_09125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_09125 PF00672 HAMP domain KCU58_09130 PF00672 HAMP domain KCU58_09130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_09130 PF02203 Tar ligand binding domain homologue KCU58_09140 PF02203 Tar ligand binding domain homologue KCU58_09140 PF00672 HAMP domain KCU58_09140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_09150 PF02203 Tar ligand binding domain homologue KCU58_09150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_09150 PF00672 HAMP domain KCU58_09155 PF00672 HAMP domain KCU58_09155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_09155 PF02203 Tar ligand binding domain homologue KCU58_09160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_09160 PF00672 HAMP domain KCU58_09160 PF02203 Tar ligand binding domain homologue KCU58_09165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_09165 PF00672 HAMP domain KCU58_09165 PF02203 Tar ligand binding domain homologue KCU58_09175 PF01627 Hpt domain KCU58_09175 PF01584 CheW-like domain KCU58_09175 PF09078 CheY binding KCU58_09175 PF02895 Signal transducing histidine kinase, homodimeric domain KCU58_09175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_09180 PF00072 Response regulator receiver domain KCU58_09190 PF01584 CheW-like domain KCU58_09195 PF13614 AAA domain KCU58_09200 PF13677 Membrane MotB of proton-channel complex MotA/MotB KCU58_09200 PF00691 OmpA family KCU58_09205 PF01618 MotA/TolQ/ExbB proton channel family KCU58_09210 PF00072 Response regulator receiver domain KCU58_09210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_09210 PF02895 Signal transducing histidine kinase, homodimeric domain KCU58_09210 PF01627 Hpt domain KCU58_09210 PF01584 CheW-like domain KCU58_09215 PF04344 Chemotaxis phosphatase, CheZ KCU58_09220 PF00072 Response regulator receiver domain KCU58_09225 PF04542 Sigma-70 region 2 KCU58_09225 PF04539 Sigma-70 region 3 KCU58_09225 PF04545 Sigma-70, region 4 KCU58_09230 PF10609 NUBPL iron-transfer P-loop NTPase KCU58_09235 PF00448 SRP54-type protein, GTPase domain KCU58_09240 PF00771 FHIPEP family KCU58_09245 PF01312 FlhB HrpN YscU SpaS Family KCU58_09250 PF00990 Diguanylate cyclase, GGDEF domain KCU58_09255 PF00990 Diguanylate cyclase, GGDEF domain KCU58_09260 PF01311 Bacterial export proteins, family 1 KCU58_09265 PF01313 Bacterial export proteins, family 3 KCU58_09270 PF00813 FliP family KCU58_09275 PF04347 Flagellar biosynthesis protein, FliO KCU58_09280 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KCU58_09285 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KCU58_09285 PF02154 Flagellar motor switch protein FliM KCU58_09305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KCU58_09305 PF18269 T3SS EscN ATPase C-terminal domain KCU58_09315 PF14842 FliG N-terminal domain KCU58_09315 PF14841 FliG middle domain KCU58_09315 PF01706 FliG C-terminal domain KCU58_09320 PF08345 Flagellar M-ring protein C-terminal KCU58_09320 PF01514 Secretory protein of YscJ/FliF family KCU58_09325 PF02049 Flagellar hook-basal body complex protein FliE KCU58_09330 PF00534 Glycosyl transferases group 1 KCU58_09330 PF00535 Glycosyl transferase family 2 KCU58_09370 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KCU58_09370 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KCU58_09380 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KCU58_09385 PF06490 Flagellar regulatory protein FleQ KCU58_09385 PF00158 Sigma-54 interaction domain KCU58_09385 PF02954 Bacterial regulatory protein, Fis family KCU58_09390 PF00072 Response regulator receiver domain KCU58_09390 PF01339 CheB methylesterase KCU58_09395 PF00309 Sigma-54 factor, Activator interacting domain (AID) KCU58_09395 PF04552 Sigma-54, DNA binding domain KCU58_09395 PF04963 Sigma-54 factor, core binding domain KCU58_09400 PF00196 Bacterial regulatory proteins, luxR family KCU58_09400 PF00072 Response regulator receiver domain KCU58_09415 PF02561 Flagellar protein FliS KCU58_09420 PF07196 Flagellin hook IN motif KCU58_09420 PF07195 Flagellar hook-associated protein 2 C-terminus KCU58_09420 PF02465 Flagellar hook-associated protein 2 N-terminus KCU58_09425 PF00700 Bacterial flagellin C-terminal helical region KCU58_09425 PF00669 Bacterial flagellin N-terminal helical region KCU58_09430 PF00669 Bacterial flagellin N-terminal helical region KCU58_09435 PF00460 Flagella basal body rod protein KCU58_09435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KCU58_09435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KCU58_09435 PF00460 Flagella basal body rod protein KCU58_09440 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KCU58_09440 PF10135 Rod binding protein KCU58_09445 PF02119 Flagellar P-ring protein KCU58_09450 PF02107 Flagellar L-ring protein KCU58_09455 PF00460 Flagella basal body rod protein KCU58_09455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KCU58_09460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KCU58_09460 PF00460 Flagella basal body rod protein KCU58_09465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KCU58_09465 PF00460 Flagella basal body rod protein KCU58_09465 PF07559 Flagellar basal body protein FlaE KCU58_09470 PF13861 FlgD Tudor-like domain KCU58_09470 PF13860 FlgD Ig-like domain KCU58_09470 PF03963 Flagellar hook capping protein - N-terminal region KCU58_09475 PF00460 Flagella basal body rod protein KCU58_09475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KCU58_09485 PF01584 CheW-like domain KCU58_09485 PF00072 Response regulator receiver domain KCU58_09505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_09505 PF13188 PAS domain KCU58_09505 PF08448 PAS fold KCU58_09505 PF00072 Response regulator receiver domain KCU58_09505 PF00512 His Kinase A (phospho-acceptor) domain KCU58_09510 PF03707 Bacterial signalling protein N terminal repeat KCU58_09510 PF00990 Diguanylate cyclase, GGDEF domain KCU58_09510 PF00563 EAL domain KCU58_09515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_09515 PF07730 Histidine kinase KCU58_09520 PF00563 EAL domain KCU58_09520 PF00990 Diguanylate cyclase, GGDEF domain KCU58_09520 PF03707 Bacterial signalling protein N terminal repeat KCU58_09530 PF00005 ABC transporter KCU58_09540 PF12729 Four helix bundle sensory module for signal transduction KCU58_09540 PF00672 HAMP domain KCU58_09540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_09545 PF04356 Protein of unknown function (DUF489) KCU58_09555 PF00293 NUDIX domain KCU58_09565 PF02617 ATP-dependent Clp protease adaptor protein ClpS KCU58_09570 PF17871 AAA lid domain KCU58_09570 PF10431 C-terminal, D2-small domain, of ClpB protein KCU58_09570 PF00004 ATPase family associated with various cellular activities (AAA) KCU58_09570 PF07724 AAA domain (Cdc48 subfamily) KCU58_09570 PF02861 Clp amino terminal domain, pathogenicity island component KCU58_09575 PF01176 Translation initiation factor 1A / IF-1 KCU58_09580 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KCU58_09590 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU58_09595 PF09397 Ftsk gamma domain KCU58_09595 PF17854 FtsK alpha domain KCU58_09595 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KCU58_09595 PF01580 FtsK/SpoIIIE family KCU58_09605 PF03548 Outer membrane lipoprotein carrier protein LolA KCU58_09615 PF00004 ATPase family associated with various cellular activities (AAA) KCU58_09615 PF16193 AAA C-terminal domain KCU58_09615 PF12002 MgsA AAA+ ATPase C terminal KCU58_09620 PF00654 Voltage gated chloride channel KCU58_09635 PF03918 Cytochrome C biogenesis protein KCU58_09640 PF08534 Redoxin KCU58_09645 PF01578 Cytochrome C assembly protein KCU58_09645 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KCU58_09650 PF03100 CcmE KCU58_09660 PF01578 Cytochrome C assembly protein KCU58_09665 PF00082 Subtilase family KCU58_09675 PF08281 Sigma-70, region 4 KCU58_09675 PF04542 Sigma-70 region 2 KCU58_09685 PF00034 Cytochrome c KCU58_09695 PF01292 Prokaryotic cytochrome b561 KCU58_09700 PF05523 WxcM-like, C-terminal KCU58_09720 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KCU58_09725 PF01943 Polysaccharide biosynthesis protein KCU58_09730 PF00535 Glycosyl transferase family 2 KCU58_09765 PF13439 Glycosyltransferase Family 4 KCU58_09765 PF00534 Glycosyl transferases group 1 KCU58_09770 PF13579 Glycosyl transferase 4-like domain KCU58_09770 PF00534 Glycosyl transferases group 1 KCU58_09795 PF00664 ABC transporter transmembrane region KCU58_09795 PF00005 ABC transporter KCU58_09810 PF00072 Response regulator receiver domain KCU58_09810 PF00196 Bacterial regulatory proteins, luxR family KCU58_09820 PF12111 Polyribonucleotide phosphorylase C terminal KCU58_09820 PF10150 Ribonuclease E/G family KCU58_09820 PF00575 S1 RNA binding domain KCU58_09825 PF00849 RNA pseudouridylate synthase KCU58_09825 PF01479 S4 domain KCU58_09835 PF02535 ZIP Zinc transporter KCU58_09845 PF01329 Pterin 4 alpha carbinolamine dehydratase KCU58_09850 PF01106 NifU-like domain KCU58_09860 PF00034 Cytochrome c KCU58_09865 PF00034 Cytochrome c KCU58_09870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KCU58_09870 PF00529 HlyD membrane-fusion protein of T1SS KCU58_09875 PF00873 AcrB/AcrD/AcrF family KCU58_09880 PF00873 AcrB/AcrD/AcrF family KCU58_09890 PF00795 Carbon-nitrogen hydrolase KCU58_09895 PF04371 Porphyromonas-type peptidyl-arginine deiminase KCU58_09905 PF00444 Ribosomal protein L36 KCU58_09910 PF02224 Cytidylate kinase KCU58_09915 PF00575 S1 RNA binding domain KCU58_09920 PF00216 Bacterial DNA-binding protein KCU58_09930 PF18073 Rubredoxin metal binding domain KCU58_09935 PF00953 Glycosyl transferase family 4 KCU58_09940 PF02719 Polysaccharide biosynthesis protein KCU58_09945 PF00483 Nucleotidyl transferase KCU58_09950 PF02803 Thiolase, C-terminal domain KCU58_09950 PF00108 Thiolase, N-terminal domain KCU58_09955 PF00378 Enoyl-CoA hydratase/isomerase KCU58_09955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KCU58_09955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KCU58_09965 PF00334 Nucleoside diphosphate kinase KCU58_09970 PF04055 Radical SAM superfamily KCU58_09980 PF13464 Domain of unknown function (DUF4115) KCU58_09990 PF01011 PQQ enzyme repeat KCU58_09990 PF13360 PQQ-like domain KCU58_09995 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KCU58_09995 PF01926 50S ribosome-binding GTPase KCU58_10000 PF12804 MobA-like NTP transferase domain KCU58_10005 PF03453 MoeA N-terminal region (domain I and II) KCU58_10005 PF00994 Probable molybdopterin binding domain KCU58_10005 PF03454 MoeA C-terminal region (domain IV) KCU58_10010 PF00899 ThiF family KCU58_10015 PF02254 TrkA-N domain KCU58_10015 PF00999 Sodium/hydrogen exchanger family KCU58_10035 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KCU58_10035 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KCU58_10040 PF00571 CBS domain KCU58_10040 PF00478 IMP dehydrogenase / GMP reductase domain KCU58_10045 PF00117 Glutamine amidotransferase class-I KCU58_10045 PF02540 NAD synthase KCU58_10045 PF00958 GMP synthase C terminal domain KCU58_10050 PF13356 Arm DNA-binding domain KCU58_10050 PF00589 Phage integrase family KCU58_10080 PF13276 HTH-like domain KCU58_10080 PF00665 Integrase core domain KCU58_10080 PF13333 Integrase core domain KCU58_10085 PF01527 Transposase KCU58_10100 PF01527 Transposase KCU58_10105 PF13276 HTH-like domain KCU58_10105 PF00665 Integrase core domain KCU58_10105 PF13333 Integrase core domain KCU58_10120 PF13333 Integrase core domain KCU58_10120 PF00665 Integrase core domain KCU58_10120 PF13276 HTH-like domain KCU58_10125 PF01527 Transposase KCU58_10150 PF17768 RecJ OB domain KCU58_10150 PF01368 DHH family KCU58_10150 PF02272 DHHA1 domain KCU58_10160 PF03449 Transcription elongation factor, N-terminal KCU58_10160 PF01272 Transcription elongation factor, GreA/GreB, C-term KCU58_10165 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KCU58_10165 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KCU58_10165 PF02142 MGS-like domain KCU58_10175 PF00117 Glutamine amidotransferase class-I KCU58_10175 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KCU58_10180 PF05173 Dihydrodipicolinate reductase, C-terminus KCU58_10180 PF01113 Dihydrodipicolinate reductase, N-terminus KCU58_10185 PF03475 3-alpha domain KCU58_10185 PF03473 MOSC domain KCU58_10190 PF00155 Aminotransferase class I and II KCU58_10210 PF00550 Phosphopantetheine attachment site KCU58_10215 PF00109 Beta-ketoacyl synthase, N-terminal domain KCU58_10215 PF02801 Beta-ketoacyl synthase, C-terminal domain KCU58_10220 PF00202 Aminotransferase class-III KCU58_10260 PF01066 CDP-alcohol phosphatidyltransferase KCU58_10265 PF01541 GIY-YIG catalytic domain KCU58_10265 PF08459 UvrC Helix-hairpin-helix N-terminal KCU58_10265 PF02151 UvrB/uvrC motif KCU58_10275 PF01451 Low molecular weight phosphotyrosine protein phosphatase KCU58_10280 PF02348 Cytidylyltransferase KCU58_10285 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KCU58_10290 PF00005 ABC transporter KCU58_10290 PF00664 ABC transporter transmembrane region KCU58_10300 PF01618 MotA/TolQ/ExbB proton channel family KCU58_10305 PF03772 Competence protein KCU58_10305 PF00753 Metallo-beta-lactamase superfamily KCU58_10315 PF00005 ABC transporter KCU58_10320 PF02687 FtsX-like permease family KCU58_10320 PF12704 MacB-like periplasmic core domain KCU58_10330 PF03937 Flavinator of succinate dehydrogenase KCU58_10335 PF13085 2Fe-2S iron-sulfur cluster binding domain KCU58_10340 PF02910 Fumarate reductase flavoprotein C-term KCU58_10340 PF00890 FAD binding domain KCU58_10345 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KCU58_10350 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KCU58_10360 PF01571 Aminomethyltransferase folate-binding domain KCU58_10365 PF00005 ABC transporter KCU58_10365 PF17912 MalK OB fold domain KCU58_10370 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KCU58_10370 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KCU58_10375 PF02685 Glucokinase KCU58_10380 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KCU58_10385 PF00920 Dehydratase family KCU58_10390 PF01081 KDPG and KHG aldolase KCU58_10400 PF00528 Binding-protein-dependent transport system inner membrane component KCU58_10405 PF00528 Binding-protein-dependent transport system inner membrane component KCU58_10425 PF00356 Bacterial regulatory proteins, lacI family KCU58_10435 PF03795 YCII-related domain KCU58_10440 PF02616 Segregation and condensation protein ScpA KCU58_10445 PF04079 Segregation and condensation complex subunit ScpB KCU58_10450 PF00849 RNA pseudouridylate synthase KCU58_10450 PF01479 S4 domain KCU58_10470 PF00795 Carbon-nitrogen hydrolase KCU58_10475 PF00155 Aminotransferase class I and II KCU58_10480 PF00005 ABC transporter KCU58_10485 PF03379 CcmB protein KCU58_10490 PF01578 Cytochrome C assembly protein KCU58_10500 PF03100 CcmE KCU58_10505 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KCU58_10505 PF01578 Cytochrome C assembly protein KCU58_10510 PF08534 Redoxin KCU58_10515 PF03918 Cytochrome C biogenesis protein KCU58_10525 PF00561 alpha/beta hydrolase fold KCU58_10530 PF00664 ABC transporter transmembrane region KCU58_10530 PF00005 ABC transporter KCU58_10535 PF00664 ABC transporter transmembrane region KCU58_10535 PF00005 ABC transporter KCU58_10540 PF01654 Cytochrome bd terminal oxidase subunit I KCU58_10545 PF02322 Cytochrome bd terminal oxidase subunit II KCU58_10575 PF13333 Integrase core domain KCU58_10575 PF00665 Integrase core domain KCU58_10575 PF13276 HTH-like domain KCU58_10580 PF01527 Transposase KCU58_10595 PF12706 Beta-lactamase superfamily domain KCU58_10595 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain KCU58_10600 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain KCU58_10600 PF12706 Beta-lactamase superfamily domain KCU58_10605 PF03621 MbtH-like protein KCU58_10610 PF00005 ABC transporter KCU58_10610 PF00664 ABC transporter transmembrane region KCU58_10615 PF00378 Enoyl-CoA hydratase/isomerase KCU58_10620 PF00155 Aminotransferase class I and II KCU58_10625 PF00378 Enoyl-CoA hydratase/isomerase KCU58_10635 PF00195 Chalcone and stilbene synthases, N-terminal domain KCU58_10635 PF02797 Chalcone and stilbene synthases, C-terminal domain KCU58_10640 PF00501 AMP-binding enzyme KCU58_10640 PF00550 Phosphopantetheine attachment site KCU58_10640 PF13193 AMP-binding enzyme C-terminal domain KCU58_10640 PF00975 Thioesterase domain KCU58_10640 PF00668 Condensation domain KCU58_10645 PF00975 Thioesterase domain KCU58_10645 PF00550 Phosphopantetheine attachment site KCU58_10645 PF00501 AMP-binding enzyme KCU58_10645 PF13193 AMP-binding enzyme C-terminal domain KCU58_10645 PF00668 Condensation domain KCU58_10650 PF00501 AMP-binding enzyme KCU58_10650 PF13193 AMP-binding enzyme C-terminal domain KCU58_10650 PF00668 Condensation domain KCU58_10650 PF00550 Phosphopantetheine attachment site KCU58_10650 PF00975 Thioesterase domain KCU58_10655 PF13193 AMP-binding enzyme C-terminal domain KCU58_10655 PF00550 Phosphopantetheine attachment site KCU58_10655 PF00668 Condensation domain KCU58_10655 PF00501 AMP-binding enzyme KCU58_10660 PF00550 Phosphopantetheine attachment site KCU58_10660 PF00668 Condensation domain KCU58_10660 PF13193 AMP-binding enzyme C-terminal domain KCU58_10660 PF00501 AMP-binding enzyme KCU58_10675 PF00155 Aminotransferase class I and II KCU58_10680 PF01070 FMN-dependent dehydrogenase KCU58_10685 PF00202 Aminotransferase class-III KCU58_10690 PF02638 Glycosyl hydrolase-like 10 KCU58_10745 PF00589 Phage integrase family KCU58_10840 PF06791 Prophage tail length tape measure protein KCU58_10920 PF10668 Phage terminase small subunit KCU58_10920 PF03592 Terminase small subunit KCU58_10990 PF00145 C-5 cytosine-specific DNA methylase KCU58_11005 PF00772 DnaB-like helicase N terminal domain KCU58_11005 PF03796 DnaB-like helicase C terminal domain KCU58_11155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_11155 PF09308 LuxQ, periplasmic KCU58_11155 PF00072 Response regulator receiver domain KCU58_11155 PF00512 His Kinase A (phospho-acceptor) domain KCU58_11160 PF17674 HHH domain KCU58_11160 PF00575 S1 RNA binding domain KCU58_11160 PF09371 Tex-like protein N-terminal domain KCU58_11160 PF16921 Tex protein YqgF-like domain KCU58_11165 PF00072 Response regulator receiver domain KCU58_11165 PF13426 PAS domain KCU58_11165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_11175 PF01266 FAD dependent oxidoreductase KCU58_11175 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KCU58_11195 PF00561 alpha/beta hydrolase fold KCU58_11205 PF01066 CDP-alcohol phosphatidyltransferase KCU58_11225 PF03618 Kinase/pyrophosphorylase KCU58_11230 PF00391 PEP-utilising enzyme, mobile domain KCU58_11230 PF02896 PEP-utilising enzyme, TIM barrel domain KCU58_11230 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KCU58_11235 PF00924 Mechanosensitive ion channel KCU58_11235 PF05552 Conserved TM helix KCU58_11240 PF00929 Exonuclease KCU58_11245 PF14437 MafB19-like deaminase KCU58_11250 PF02742 Iron dependent repressor, metal binding and dimerisation domain KCU58_11250 PF01325 Iron dependent repressor, N-terminal DNA binding domain KCU58_11255 PF01566 Natural resistance-associated macrophage protein KCU58_11260 PF00512 His Kinase A (phospho-acceptor) domain KCU58_11260 PF00072 Response regulator receiver domain KCU58_11260 PF13188 PAS domain KCU58_11260 PF08448 PAS fold KCU58_11260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_11265 PF06745 KaiC KCU58_11270 PF16338 Domain of unknown function (DUF4968) KCU58_11270 PF17137 Domain of unknown function (DUF5110) KCU58_11270 PF01055 Glycosyl hydrolases family 31 KCU58_11275 PF01527 Transposase KCU58_11320 PF01527 Transposase KCU58_11325 PF00665 Integrase core domain KCU58_11325 PF13333 Integrase core domain KCU58_11325 PF13276 HTH-like domain KCU58_11330 PF01850 PIN domain KCU58_11340 PF17273 Family of unknown function (DUF5338) KCU58_11360 PF01609 Transposase DDE domain KCU58_11360 PF05598 Transposase domain (DUF772) KCU58_11365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KCU58_11365 PF02770 Acyl-CoA dehydrogenase, middle domain KCU58_11365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KCU58_11370 PF01209 ubiE/COQ5 methyltransferase family KCU58_11375 PF00809 Pterin binding enzyme KCU58_11375 PF02574 Homocysteine S-methyltransferase KCU58_11380 PF02310 B12 binding domain KCU58_11380 PF02607 B12 binding domain KCU58_11380 PF02965 Vitamin B12 dependent methionine synthase, activation domain KCU58_11380 PF00809 Pterin binding enzyme KCU58_11380 PF02574 Homocysteine S-methyltransferase KCU58_11390 PF01757 Acyltransferase family KCU58_11400 PF04102 SlyX KCU58_11405 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KCU58_11405 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KCU58_11405 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KCU58_11410 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KCU58_11410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KCU58_11415 PF00255 Glutathione peroxidase KCU58_11425 PF00392 Bacterial regulatory proteins, gntR family KCU58_11430 PF00005 ABC transporter KCU58_11455 PF10415 Fumarase C C-terminus KCU58_11455 PF00206 Lyase KCU58_11465 PF08328 Adenylosuccinate lyase C-terminal KCU58_11465 PF00206 Lyase KCU58_11475 PF00223 Photosystem I psaA/psaB protein KCU58_11475 PF00691 OmpA family KCU58_11480 PF08007 Cupin superfamily protein KCU58_11490 PF16078 2-oxoglutarate dehydrogenase N-terminus KCU58_11490 PF00676 Dehydrogenase E1 component KCU58_11490 PF16870 2-oxoglutarate dehydrogenase C-terminal KCU58_11490 PF02779 Transketolase, pyrimidine binding domain KCU58_11495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KCU58_11495 PF00364 Biotin-requiring enzyme KCU58_11495 PF02817 e3 binding domain KCU58_11500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KCU58_11500 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU58_11505 PF03641 Possible lysine decarboxylase KCU58_11510 PF00563 EAL domain KCU58_11510 PF03707 Bacterial signalling protein N terminal repeat KCU58_11510 PF00990 Diguanylate cyclase, GGDEF domain KCU58_11515 PF04542 Sigma-70 region 2 KCU58_11515 PF08281 Sigma-70, region 4 KCU58_11525 PF01205 Uncharacterized protein family UPF0029 KCU58_11530 PF00664 ABC transporter transmembrane region KCU58_11530 PF00005 ABC transporter KCU58_11540 PF01817 Chorismate mutase type II KCU58_11540 PF02153 Prephenate dehydrogenase KCU58_11545 PF08543 Phosphomethylpyrimidine kinase KCU58_11550 PF00226 DnaJ domain KCU58_11550 PF01556 DnaJ C terminal domain KCU58_11550 PF00684 DnaJ central domain KCU58_11555 PF00012 Hsp70 protein KCU58_11560 PF01025 GrpE KCU58_11565 PF01628 HrcA protein C terminal domain KCU58_11565 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding KCU58_11570 PF02463 RecF/RecN/SMC N terminal domain KCU58_11575 PF01475 Ferric uptake regulator family KCU58_11580 PF04355 SmpA / OmlA family KCU58_11585 PF03658 RnfH family Ubiquitin KCU58_11590 PF03364 Polyketide cyclase / dehydrase and lipid transport KCU58_11595 PF01668 SmpB protein KCU58_11600 PF00082 Subtilase family KCU58_11620 PF02321 Outer membrane efflux protein KCU58_11625 PF00106 short chain dehydrogenase KCU58_11630 PF00873 AcrB/AcrD/AcrF family KCU58_11635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KCU58_11635 PF00529 HlyD membrane-fusion protein of T1SS KCU58_11650 PF03466 LysR substrate binding domain KCU58_11650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU58_11655 PF00691 OmpA family KCU58_11655 PF05736 OprF membrane domain KCU58_11660 PF06974 Protein of unknown function (DUF1298) KCU58_11660 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KCU58_11665 PF00875 DNA photolyase KCU58_11665 PF03441 FAD binding domain of DNA photolyase KCU58_11670 PF03796 DnaB-like helicase C terminal domain KCU58_11670 PF00772 DnaB-like helicase N terminal domain KCU58_11675 PF03358 NADPH-dependent FMN reductase KCU58_11680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KCU58_11680 PF02770 Acyl-CoA dehydrogenase, middle domain KCU58_11680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KCU58_11695 PF01026 TatD related DNase KCU58_11700 PF00899 ThiF family KCU58_11715 PF00313 'Cold-shock' DNA-binding domain KCU58_11725 PF02253 Phospholipase A1 KCU58_11740 PF05683 Fumarase C-terminus KCU58_11740 PF05681 Fumarate hydratase (Fumerase) KCU58_11745 PF04542 Sigma-70 region 2 KCU58_11745 PF08281 Sigma-70, region 4 KCU58_11750 PF02627 Carboxymuconolactone decarboxylase family KCU58_11760 PF00005 ABC transporter KCU58_11770 PF00175 Oxidoreductase NAD-binding domain KCU58_11770 PF00970 Oxidoreductase FAD-binding domain KCU58_11775 PF00255 Glutathione peroxidase KCU58_11790 PF01047 MarR family KCU58_11820 PF00854 POT family KCU58_11830 PF00933 Glycosyl hydrolase family 3 N terminal domain KCU58_11830 PF14310 Fibronectin type III-like domain KCU58_11830 PF01915 Glycosyl hydrolase family 3 C-terminal domain KCU58_11840 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KCU58_11840 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KCU58_11845 PF00545 ribonuclease KCU58_11855 PF00005 ABC transporter KCU58_11855 PF16326 ABC transporter C-terminal domain KCU58_11855 PF12848 ABC transporter KCU58_11860 PF03880 DbpA RNA binding domain KCU58_11860 PF00270 DEAD/DEAH box helicase KCU58_11860 PF00271 Helicase conserved C-terminal domain KCU58_11865 PF00156 Phosphoribosyl transferase domain KCU58_11870 PF00873 AcrB/AcrD/AcrF family KCU58_11875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KCU58_11875 PF00529 HlyD membrane-fusion protein of T1SS KCU58_11885 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KCU58_11890 PF07859 alpha/beta hydrolase fold KCU58_11895 PF00043 Glutathione S-transferase, C-terminal domain KCU58_11895 PF02798 Glutathione S-transferase, N-terminal domain KCU58_11900 PF00313 'Cold-shock' DNA-binding domain KCU58_11905 PF00849 RNA pseudouridylate synthase KCU58_11910 PF07152 YaeQ protein KCU58_11920 PF00990 Diguanylate cyclase, GGDEF domain KCU58_11920 PF00072 Response regulator receiver domain KCU58_11920 PF00563 EAL domain KCU58_11925 PF01435 Peptidase family M48 KCU58_11930 PF00749 tRNA synthetases class I (E and Q), catalytic domain KCU58_11935 PF00106 short chain dehydrogenase KCU58_11940 PF05233 PHB accumulation regulatory domain KCU58_11940 PF07879 PHB/PHA accumulation regulator DNA-binding domain KCU58_11955 PF01119 DNA mismatch repair protein, C-terminal domain KCU58_11955 PF08676 MutL C terminal dimerisation domain KCU58_11960 PF11741 AMIN domain KCU58_11960 PF01520 N-acetylmuramoyl-L-alanine amidase KCU58_11965 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KCU58_11970 PF01256 Carbohydrate kinase KCU58_11970 PF03853 YjeF-related protein N-terminus KCU58_11975 PF08331 Domain of unknown function (DUF1730) KCU58_11980 PF02601 Exonuclease VII, large subunit KCU58_11980 PF13742 OB-fold nucleic acid binding domain KCU58_12020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KCU58_12020 PF12806 Acetyl-CoA dehydrogenase C-terminal like KCU58_12020 PF02770 Acyl-CoA dehydrogenase, middle domain KCU58_12020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KCU58_12030 PF02780 Transketolase, C-terminal domain KCU58_12030 PF02779 Transketolase, pyrimidine binding domain KCU58_12030 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KCU58_12040 PF03808 Glycosyl transferase WecB/TagA/CpsF family KCU58_12055 PF14667 Polysaccharide biosynthesis C-terminal domain KCU58_12065 PF13439 Glycosyltransferase Family 4 KCU58_12065 PF00534 Glycosyl transferases group 1 KCU58_12080 PF02397 Bacterial sugar transferase KCU58_12100 PF13411 MerR HTH family regulatory protein KCU58_12105 PF00216 Bacterial DNA-binding protein KCU58_12110 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KCU58_12110 PF01588 Putative tRNA binding domain KCU58_12110 PF03484 tRNA synthetase B5 domain KCU58_12110 PF03483 B3/4 domain KCU58_12110 PF03147 Ferredoxin-fold anticodon binding domain KCU58_12115 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KCU58_12115 PF01409 tRNA synthetases class II core domain (F) KCU58_12120 PF00453 Ribosomal protein L20 KCU58_12125 PF01632 Ribosomal protein L35 KCU58_12130 PF00707 Translation initiation factor IF-3, C-terminal domain KCU58_12130 PF05198 Translation initiation factor IF-3, N-terminal domain KCU58_12135 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KCU58_12135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KCU58_12135 PF02824 TGS domain KCU58_12135 PF03129 Anticodon binding domain KCU58_12155 PF07670 Nucleoside recognition KCU58_12155 PF02421 Ferrous iron transport protein B KCU58_12155 PF07664 Ferrous iron transport protein B C terminus KCU58_12165 PF00378 Enoyl-CoA hydratase/isomerase KCU58_12170 PF00682 HMGL-like KCU58_12175 PF00106 short chain dehydrogenase KCU58_12180 PF01132 Elongation factor P (EF-P) OB domain KCU58_12180 PF09285 Elongation factor P, C-terminal KCU58_12180 PF08207 Elongation factor P (EF-P) KOW-like domain KCU58_12200 PF02913 FAD linked oxidases, C-terminal domain KCU58_12200 PF01565 FAD binding domain KCU58_12205 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KCU58_12205 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KCU58_12220 PF13520 Amino acid permease KCU58_12225 PF13520 Amino acid permease KCU58_12230 PF00596 Class II Aldolase and Adducin N-terminal domain KCU58_12235 PF03079 ARD/ARD' family KCU58_12260 PF01502 Phosphoribosyl-AMP cyclohydrolase KCU58_12260 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KCU58_12265 PF00977 Histidine biosynthesis protein KCU58_12270 PF00977 Histidine biosynthesis protein KCU58_12275 PF00117 Glutamine amidotransferase class-I KCU58_12280 PF00475 Imidazoleglycerol-phosphate dehydratase KCU58_12285 PF00155 Aminotransferase class I and II KCU58_12290 PF00815 Histidinol dehydrogenase KCU58_12295 PF01634 ATP phosphoribosyltransferase KCU58_12295 PF08029 HisG, C-terminal domain KCU58_12305 PF03129 Anticodon binding domain KCU58_12305 PF13393 Histidyl-tRNA synthetase KCU58_12310 PF00027 Cyclic nucleotide-binding domain KCU58_12310 PF13545 Crp-like helix-turn-helix domain KCU58_12320 PF00291 Pyridoxal-phosphate dependent enzyme KCU58_12320 PF14821 Threonine synthase N terminus KCU58_12325 PF07519 Tannase and feruloyl esterase KCU58_12330 PF13406 Transglycosylase SLT domain KCU58_12335 PF08544 GHMP kinases C terminal KCU58_12335 PF00288 GHMP kinases N terminal domain KCU58_12340 PF03447 Homoserine dehydrogenase, NAD binding domain KCU58_12340 PF13840 ACT domain KCU58_12340 PF00742 Homoserine dehydrogenase KCU58_12340 PF00696 Amino acid kinase family KCU58_12340 PF01842 ACT domain KCU58_12355 PF00171 Aldehyde dehydrogenase family KCU58_12370 PF01180 Dihydroorotate dehydrogenase KCU58_12375 PF01565 FAD binding domain KCU58_12375 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KCU58_12400 PF01569 PAP2 superfamily KCU58_12405 PF04551 GcpE protein KCU58_12415 PF02954 Bacterial regulatory protein, Fis family KCU58_12415 PF00072 Response regulator receiver domain KCU58_12420 PF00990 Diguanylate cyclase, GGDEF domain KCU58_12420 PF00563 EAL domain KCU58_12420 PF03707 Bacterial signalling protein N terminal repeat KCU58_12425 PF00474 Sodium:solute symporter family KCU58_12430 PF14310 Fibronectin type III-like domain KCU58_12430 PF00933 Glycosyl hydrolase family 3 N terminal domain KCU58_12430 PF01915 Glycosyl hydrolase family 3 C-terminal domain KCU58_12435 PF04717 Type VI secretion system, phage-baseplate injector KCU58_12435 PF06715 Gp5 C-terminal repeat (3 copies) KCU58_12485 PF00342 Phosphoglucose isomerase KCU58_12490 PF02261 Aspartate decarboxylase KCU58_12495 PF02569 Pantoate-beta-alanine ligase KCU58_12500 PF02548 Ketopantoate hydroxymethyltransferase KCU58_12505 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KCU58_12510 PF12626 Polymerase A arginine-rich C-terminus KCU58_12510 PF01743 Poly A polymerase head domain KCU58_12510 PF12627 Probable RNA and SrmB- binding site of polymerase A KCU58_12520 PF00132 Bacterial transferase hexapeptide (six repeats) KCU58_12525 PF02649 Type I GTP cyclohydrolase folE2 KCU58_12530 PF01520 N-acetylmuramoyl-L-alanine amidase KCU58_12530 PF11741 AMIN domain KCU58_12535 PF00083 Sugar (and other) transporter KCU58_12545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KCU58_12545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KCU58_12565 PF00171 Aldehyde dehydrogenase family KCU58_12570 PF01472 PUA domain KCU58_12570 PF00696 Amino acid kinase family KCU58_12585 PF00206 Lyase KCU58_12590 PF01118 Semialdehyde dehydrogenase, NAD binding domain KCU58_12600 PF00696 Amino acid kinase family KCU58_12600 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase KCU58_12605 PF01546 Peptidase family M20/M25/M40 KCU58_12605 PF07687 Peptidase dimerisation domain KCU58_12610 PF00764 Arginosuccinate synthase KCU58_12615 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KCU58_12615 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KCU58_12625 PF01406 tRNA synthetases class I (C) catalytic domain KCU58_12625 PF09190 DALR domain KCU58_12630 PF02657 Fe-S metabolism associated domain KCU58_12640 PF00561 alpha/beta hydrolase fold KCU58_12645 PF00529 HlyD membrane-fusion protein of T1SS KCU58_12665 PF01011 PQQ enzyme repeat KCU58_12665 PF13360 PQQ-like domain KCU58_12690 PF01258 Prokaryotic dksA/traR C4-type zinc finger KCU58_12695 PF01809 Putative membrane protein insertion efficiency factor KCU58_12700 PF01979 Amidohydrolase family KCU58_12705 PF08460 Bacterial SH3 domain KCU58_12705 PF01551 Peptidase family M23 KCU58_12715 PF00295 Glycosyl hydrolases family 28 KCU58_12730 PF13419 Haloacid dehalogenase-like hydrolase KCU58_12740 PF01979 Amidohydrolase family KCU58_12745 PF06736 Protein of unknown function (DUF1211) KCU58_12750 PF09285 Elongation factor P, C-terminal KCU58_12750 PF01132 Elongation factor P (EF-P) OB domain KCU58_12750 PF08207 Elongation factor P (EF-P) KOW-like domain KCU58_12755 PF04055 Radical SAM superfamily KCU58_12760 PF00563 EAL domain KCU58_12760 PF01590 GAF domain KCU58_12760 PF00990 Diguanylate cyclase, GGDEF domain KCU58_12760 PF00360 Phytochrome region KCU58_12770 PF00588 SpoU rRNA Methylase family KCU58_12775 PF00459 Inositol monophosphatase family KCU58_12780 PF07549 SecD/SecF GG Motif KCU58_12780 PF02355 Protein export membrane protein KCU58_12785 PF13721 SecD export protein N-terminal TM region KCU58_12785 PF07549 SecD/SecF GG Motif KCU58_12785 PF02355 Protein export membrane protein KCU58_12790 PF02699 Preprotein translocase subunit KCU58_12795 PF01702 Queuine tRNA-ribosyltransferase KCU58_12800 PF02547 Queuosine biosynthesis protein KCU58_12810 PF00202 Aminotransferase class-III KCU58_12825 PF02927 Cellulase N-terminal ig-like domain KCU58_12825 PF00759 Glycosyl hydrolase family 9 KCU58_12830 PF00753 Metallo-beta-lactamase superfamily KCU58_12840 PF00037 4Fe-4S binding domain KCU58_12850 PF01467 Cytidylyltransferase-like KCU58_12860 PF00183 Hsp90 protein KCU58_12860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_12865 PF02615 Malate/L-lactate dehydrogenase KCU58_12870 PF07715 TonB-dependent Receptor Plug Domain KCU58_12870 PF00593 TonB dependent receptor KCU58_12880 PF00593 TonB dependent receptor KCU58_12880 PF07715 TonB-dependent Receptor Plug Domain KCU58_12890 PF04616 Glycosyl hydrolases family 43 KCU58_12895 PF07532 Bacterial Ig-like domain (group 4) KCU58_12900 PF07715 TonB-dependent Receptor Plug Domain KCU58_12900 PF00593 TonB dependent receptor KCU58_12925 PF13520 Amino acid permease KCU58_12940 PF01321 Creatinase/Prolidase N-terminal domain KCU58_12940 PF00557 Metallopeptidase family M24 KCU58_12945 PF00171 Aldehyde dehydrogenase family KCU58_12950 PF00701 Dihydrodipicolinate synthetase family KCU58_12955 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU58_12955 PF17806 Sarcosine oxidase A3 domain KCU58_12965 PF01266 FAD dependent oxidoreductase KCU58_12970 PF05544 Proline racemase KCU58_12980 PF00448 SRP54-type protein, GTPase domain KCU58_12980 PF02881 SRP54-type protein, helical bundle domain KCU58_12985 PF00633 Helix-hairpin-helix motif KCU58_12985 PF14815 NUDIX domain KCU58_12985 PF00730 HhH-GPD superfamily base excision DNA repair protein KCU58_12985 PF10576 Iron-sulfur binding domain of endonuclease III KCU58_12990 PF04362 Bacterial Fe(2+) trafficking KCU58_13010 PF00570 HRDC domain KCU58_13010 PF01612 3'-5' exonuclease KCU58_13035 PF01584 CheW-like domain KCU58_13040 PF00672 HAMP domain KCU58_13040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_13040 PF02203 Tar ligand binding domain homologue KCU58_13045 PF00672 HAMP domain KCU58_13045 PF02743 Cache domain KCU58_13045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_13065 PF03707 Bacterial signalling protein N terminal repeat KCU58_13065 PF13188 PAS domain KCU58_13065 PF00990 Diguanylate cyclase, GGDEF domain KCU58_13065 PF00563 EAL domain KCU58_13070 PF00013 KH domain KCU58_13070 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KCU58_13070 PF01138 3' exoribonuclease family, domain 1 KCU58_13070 PF03725 3' exoribonuclease family, domain 2 KCU58_13070 PF00575 S1 RNA binding domain KCU58_13075 PF00312 Ribosomal protein S15 KCU58_13080 PF01509 TruB family pseudouridylate synthase (N terminal domain) KCU58_13080 PF09157 Pseudouridine synthase II TruB, C-terminal KCU58_13080 PF16198 tRNA pseudouridylate synthase B C-terminal domain KCU58_13085 PF02033 Ribosome-binding factor A KCU58_13090 PF08364 Bacterial translation initiation factor IF-2 associated region KCU58_13090 PF04760 Translation initiation factor IF-2, N-terminal region KCU58_13090 PF00009 Elongation factor Tu GTP binding domain KCU58_13090 PF11987 Translation-initiation factor 2 KCU58_13095 PF00575 S1 RNA binding domain KCU58_13095 PF08529 NusA N-terminal domain KCU58_13095 PF13184 NusA-like KH domain KCU58_13100 PF17384 RimP C-terminal SH3 domain KCU58_13100 PF02576 RimP N-terminal domain KCU58_13110 PF00361 Proton-conducting membrane transporter KCU58_13115 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus KCU58_13115 PF00361 Proton-conducting membrane transporter KCU58_13120 PF00361 Proton-conducting membrane transporter KCU58_13120 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KCU58_13125 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KCU58_13130 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KCU58_13135 PF12838 4Fe-4S dicluster domain KCU58_13140 PF00146 NADH dehydrogenase KCU58_13145 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal KCU58_13145 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KCU58_13145 PF00384 Molybdopterin oxidoreductase KCU58_13150 PF10531 SLBB domain KCU58_13150 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KCU58_13150 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KCU58_13160 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KCU58_13165 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KCU58_13170 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KCU58_13175 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KCU58_13190 PF00121 Triosephosphate isomerase KCU58_13200 PF01965 DJ-1/PfpI family KCU58_13210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KCU58_13210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KCU58_13210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KCU58_13210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KCU58_13215 PF17848 Acetyl-coA carboxylase zinc finger domain KCU58_13215 PF01039 Carboxyl transferase domain KCU58_13220 PF00290 Tryptophan synthase alpha chain KCU58_13230 PF00291 Pyridoxal-phosphate dependent enzyme KCU58_13235 PF03466 LysR substrate binding domain KCU58_13235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU58_13240 PF05816 Toxic anion resistance protein (TelA) KCU58_13245 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KCU58_13250 PF01416 tRNA pseudouridine synthase KCU58_13260 PF01118 Semialdehyde dehydrogenase, NAD binding domain KCU58_13260 PF02774 Semialdehyde dehydrogenase, dimerisation domain KCU58_13265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KCU58_13265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KCU58_13270 PF01264 Chorismate synthase KCU58_13275 PF05175 Methyltransferase small domain KCU58_13280 PF02630 SCO1/SenC KCU58_13285 PF02666 Phosphatidylserine decarboxylase KCU58_13290 PF06737 Transglycosylase-like domain KCU58_13295 PF05872 Bacterial protein of unknown function (DUF853) KCU58_13300 PF00293 NUDIX domain KCU58_13315 PF01272 Transcription elongation factor, GreA/GreB, C-term KCU58_13315 PF03449 Transcription elongation factor, N-terminal KCU58_13320 PF01738 Dienelactone hydrolase family KCU58_13335 PF06271 RDD family KCU58_13340 PF00692 dUTPase KCU58_13345 PF10609 NUBPL iron-transfer P-loop NTPase KCU58_13355 PF07715 TonB-dependent Receptor Plug Domain KCU58_13355 PF00593 TonB dependent receptor KCU58_13360 PF07715 TonB-dependent Receptor Plug Domain KCU58_13360 PF00593 TonB dependent receptor KCU58_13365 PF13181 Tetratricopeptide repeat KCU58_13380 PF01431 Peptidase family M13 KCU58_13380 PF05649 Peptidase family M13 KCU58_13400 PF05598 Transposase domain (DUF772) KCU58_13430 PF00892 EamA-like transporter family KCU58_13435 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA KCU58_13440 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA KCU58_13445 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KCU58_13445 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU58_13450 PF01266 FAD dependent oxidoreductase KCU58_13455 PF04235 Protein of unknown function (DUF418) KCU58_13460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KCU58_13465 PF00877 NlpC/P60 family KCU58_13470 PF00877 NlpC/P60 family KCU58_13485 PF03061 Thioesterase superfamily KCU58_13495 PF00375 Sodium:dicarboxylate symporter family KCU58_13500 PF00245 Alkaline phosphatase KCU58_13510 PF01171 PP-loop family KCU58_13510 PF09179 TilS substrate binding domain KCU58_13510 PF11734 TilS substrate C-terminal domain KCU58_13515 PF02609 Exonuclease VII small subunit KCU58_13520 PF00348 Polyprenyl synthetase KCU58_13525 PF00072 Response regulator receiver domain KCU58_13525 PF00486 Transcriptional regulatory protein, C terminal KCU58_13530 PF03150 Di-haem cytochrome c peroxidase KCU58_13530 PF00034 Cytochrome c KCU58_13535 PF00072 Response regulator receiver domain KCU58_13535 PF13188 PAS domain KCU58_13535 PF08448 PAS fold KCU58_13535 PF00512 His Kinase A (phospho-acceptor) domain KCU58_13535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_13540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU58_13540 PF03466 LysR substrate binding domain KCU58_13545 PF06812 ImpA, N-terminal, type VI secretion system KCU58_13555 PF00069 Protein kinase domain KCU58_13555 PF03793 PASTA domain KCU58_13570 PF06761 Intracellular multiplication and human macrophage-killing KCU58_13570 PF14331 ImcF-related N-terminal domain KCU58_13570 PF06744 Type VI secretion protein IcmF C-terminal KCU58_13580 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE KCU58_13595 PF06715 Gp5 C-terminal repeat (3 copies) KCU58_13595 PF04717 Type VI secretion system, phage-baseplate injector KCU58_13605 PF00004 ATPase family associated with various cellular activities (AAA) KCU58_13605 PF07724 AAA domain (Cdc48 subfamily) KCU58_13605 PF17871 AAA lid domain KCU58_13605 PF10431 C-terminal, D2-small domain, of ClpB protein KCU58_13615 PF05947 Type VI secretion system, TssF KCU58_13620 PF04965 Gene 25-like lysozyme KCU58_13625 PF07024 ImpE protein KCU58_13630 PF05638 Type VI secretion system effector, Hcp KCU58_13635 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KCU58_13640 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 KCU58_13650 PF01523 Putative modulator of DNA gyrase KCU58_13655 PF04751 Protein of unknown function (DUF615) KCU58_13660 PF01523 Putative modulator of DNA gyrase KCU58_13670 PF10150 Ribonuclease E/G family KCU58_13670 PF00575 S1 RNA binding domain KCU58_13675 PF02545 Maf-like protein KCU58_13680 PF04402 Protein of unknown function (DUF541) KCU58_13690 PF07715 TonB-dependent Receptor Plug Domain KCU58_13690 PF00593 TonB dependent receptor KCU58_13695 PF02590 Predicted SPOUT methyltransferase KCU58_13710 PF01467 Cytidylyltransferase-like KCU58_13725 PF13603 Leucyl-tRNA synthetase, Domain 2 KCU58_13725 PF00133 tRNA synthetases class I (I, L, M and V) KCU58_13725 PF08264 Anticodon-binding domain of tRNA KCU58_13735 PF00085 Thioredoxin KCU58_13755 PF02592 Putative vitamin uptake transporter KCU58_13765 PF02574 Homocysteine S-methyltransferase KCU58_13770 PF00324 Amino acid permease KCU58_13780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KCU58_13790 PF09334 tRNA synthetases class I (M) KCU58_13790 PF01588 Putative tRNA binding domain KCU58_13800 PF04060 Putative Fe-S cluster KCU58_13815 PF04542 Sigma-70 region 2 KCU58_13815 PF04545 Sigma-70, region 4 KCU58_13860 PF01042 Endoribonuclease L-PSP KCU58_13870 PF09924 Uncharacterised conserved protein (DUF2156) KCU58_13870 PF03706 Lysylphosphatidylglycerol synthase TM region KCU58_13900 PF07690 Major Facilitator Superfamily KCU58_13910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KCU58_13915 PF08274 PhnA Zinc-Ribbon KCU58_13915 PF03831 PhnA domain KCU58_13920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KCU58_13930 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus KCU58_13930 PF05175 Methyltransferase small domain KCU58_13960 PF01258 Prokaryotic dksA/traR C4-type zinc finger KCU58_13970 PF01863 Protein of unknown function DUF45 KCU58_13990 PF13472 GDSL-like Lipase/Acylhydrolase family KCU58_13995 PF00072 Response regulator receiver domain KCU58_13995 PF01627 Hpt domain KCU58_13995 PF00512 His Kinase A (phospho-acceptor) domain KCU58_13995 PF00672 HAMP domain KCU58_13995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_14000 PF13360 PQQ-like domain KCU58_14000 PF01011 PQQ enzyme repeat KCU58_14005 PF00392 Bacterial regulatory proteins, gntR family KCU58_14005 PF07729 FCD domain KCU58_14010 PF16353 Domain of unknown function(DUF4981) KCU58_14010 PF00703 Glycosyl hydrolases family 2 KCU58_14010 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KCU58_14010 PF02837 Glycosyl hydrolases family 2, sugar binding domain KCU58_14010 PF02929 Beta galactosidase small chain KCU58_14075 PF02310 B12 binding domain KCU58_14075 PF01642 Methylmalonyl-CoA mutase KCU58_14095 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KCU58_14095 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KCU58_14105 PF03797 Autotransporter beta-domain KCU58_14105 PF12951 Passenger-associated-transport-repeat KCU58_14105 PF00082 Subtilase family KCU58_14110 PF00108 Thiolase, N-terminal domain KCU58_14110 PF02803 Thiolase, C-terminal domain KCU58_14120 PF00012 Hsp70 protein KCU58_14135 PF00072 Response regulator receiver domain KCU58_14135 PF00990 Diguanylate cyclase, GGDEF domain KCU58_14150 PF04675 DNA ligase N terminus KCU58_14150 PF01068 ATP dependent DNA ligase domain KCU58_14150 PF04679 ATP dependent DNA ligase C terminal region KCU58_14155 PF04675 DNA ligase N terminus KCU58_14155 PF04679 ATP dependent DNA ligase C terminal region KCU58_14155 PF01068 ATP dependent DNA ligase domain KCU58_14160 PF00271 Helicase conserved C-terminal domain KCU58_14160 PF08494 DEAD/H associated KCU58_14160 PF00270 DEAD/DEAH box helicase KCU58_14170 PF01494 FAD binding domain KCU58_14175 PF00313 'Cold-shock' DNA-binding domain KCU58_14180 PF01048 Phosphorylase superfamily KCU58_14185 PF00156 Phosphoribosyl transferase domain KCU58_14190 PF00933 Glycosyl hydrolase family 3 N terminal domain KCU58_14200 PF01928 CYTH domain KCU58_14205 PF05958 tRNA (Uracil-5-)-methyltransferase KCU58_14210 PF00072 Response regulator receiver domain KCU58_14210 PF00486 Transcriptional regulatory protein, C terminal KCU58_14220 PF07650 KH domain KCU58_14220 PF01926 50S ribosome-binding GTPase KCU58_14225 PF00035 Double-stranded RNA binding motif KCU58_14225 PF14622 Ribonuclease-III-like KCU58_14235 PF10502 Signal peptidase, peptidase S26 KCU58_14240 PF00679 Elongation factor G C-terminus KCU58_14240 PF00009 Elongation factor Tu GTP binding domain KCU58_14240 PF03144 Elongation factor Tu domain 2 KCU58_14240 PF06421 GTP-binding protein LepA C-terminus KCU58_14245 PF13180 PDZ domain KCU58_14255 PF04542 Sigma-70 region 2 KCU58_14255 PF08281 Sigma-70, region 4 KCU58_14260 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KCU58_14260 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KCU58_14260 PF00378 Enoyl-CoA hydratase/isomerase KCU58_14270 PF01545 Cation efflux family KCU58_14275 PF03601 Conserved hypothetical protein 698 KCU58_14280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU58_14290 PF05188 MutS domain II KCU58_14290 PF01624 MutS domain I KCU58_14290 PF05192 MutS domain III KCU58_14290 PF05190 MutS family domain IV KCU58_14290 PF00488 MutS domain V KCU58_14305 PF00141 Peroxidase KCU58_14310 PF01479 S4 domain KCU58_14320 PF01554 MatE KCU58_14325 PF01245 Ribosomal protein L19 KCU58_14330 PF01746 tRNA (Guanine-1)-methyltransferase KCU58_14335 PF01782 RimM N-terminal domain KCU58_14335 PF05239 PRC-barrel domain KCU58_14340 PF00886 Ribosomal protein S16 KCU58_14350 PF03060 Nitronate monooxygenase KCU58_14355 PF02978 Signal peptide binding domain KCU58_14355 PF00448 SRP54-type protein, GTPase domain KCU58_14355 PF02881 SRP54-type protein, helical bundle domain KCU58_14365 PF01263 Aldose 1-epimerase KCU58_14370 PF06964 Alpha-L-arabinofuranosidase C-terminal domain KCU58_14380 PF00999 Sodium/hydrogen exchanger family KCU58_14390 PF00043 Glutathione S-transferase, C-terminal domain KCU58_14390 PF13417 Glutathione S-transferase, N-terminal domain KCU58_14395 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation KCU58_14395 PF10566 Glycoside hydrolase 97 KCU58_14395 PF14508 Glycosyl-hydrolase 97 N-terminal KCU58_14405 PF02653 Branched-chain amino acid transport system / permease component KCU58_14410 PF02653 Branched-chain amino acid transport system / permease component KCU58_14415 PF00005 ABC transporter KCU58_14420 PF13407 Periplasmic binding protein domain KCU58_14425 PF00171 Aldehyde dehydrogenase family KCU58_14435 PF03466 LysR substrate binding domain KCU58_14435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU58_14445 PF00920 Dehydratase family KCU58_14450 PF01464 Transglycosylase SLT domain KCU58_14465 PF00263 Bacterial type II and III secretion system protein KCU58_14465 PF03958 Bacterial type II/III secretion system short domain KCU58_14470 PF12833 Helix-turn-helix domain KCU58_14485 PF02874 ATP synthase alpha/beta family, beta-barrel domain KCU58_14485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KCU58_14485 PF18269 T3SS EscN ATPase C-terminal domain KCU58_14490 PF06635 Nodulation protein NolV KCU58_14500 PF01514 Secretory protein of YscJ/FliF family KCU58_14515 PF01312 FlhB HrpN YscU SpaS Family KCU58_14520 PF00771 FHIPEP family KCU58_14535 PF00813 FliP family KCU58_14540 PF01313 Bacterial export proteins, family 3 KCU58_14570 PF00072 Response regulator receiver domain KCU58_14570 PF00486 Transcriptional regulatory protein, C terminal KCU58_14600 PF05656 Protein of unknown function (DUF805) KCU58_14605 PF18073 Rubredoxin metal binding domain KCU58_14610 PF00155 Aminotransferase class I and II KCU58_14620 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KCU58_14625 PF00510 Cytochrome c oxidase subunit III KCU58_14630 PF00115 Cytochrome C and Quinol oxidase polypeptide I KCU58_14635 PF06481 COX Aromatic Rich Motif KCU58_14635 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KCU58_14650 PF02401 LytB protein KCU58_14655 PF01252 Signal peptidase (SPase) II KCU58_14660 PF08264 Anticodon-binding domain of tRNA KCU58_14660 PF00133 tRNA synthetases class I (I, L, M and V) KCU58_14660 PF06827 Zinc finger found in FPG and IleRS KCU58_14665 PF06574 FAD synthetase KCU58_14665 PF01687 Riboflavin kinase KCU58_14685 PF03023 Lipid II flippase MurJ KCU58_14690 PF01649 Ribosomal protein S20 KCU58_14695 PF01018 GTP1/OBG KCU58_14695 PF01926 50S ribosome-binding GTPase KCU58_14700 PF01016 Ribosomal L27 protein KCU58_14705 PF00829 Ribosomal prokaryotic L21 protein KCU58_14710 PF00005 ABC transporter KCU58_14710 PF17755 UvrA DNA-binding domain KCU58_14710 PF17760 UvrA interaction domain KCU58_14725 PF00378 Enoyl-CoA hydratase/isomerase KCU58_14740 PF13202 EF hand KCU58_14740 PF00923 Transaldolase/Fructose-6-phosphate aldolase KCU58_14745 PF04377 Arginine-tRNA-protein transferase, C terminus KCU58_14745 PF04376 Arginine-tRNA-protein transferase, N terminus KCU58_14755 PF02222 ATP-grasp domain KCU58_14755 PF01370 NAD dependent epimerase/dehydratase family KCU58_14810 PF02824 TGS domain KCU58_14810 PF04607 Region found in RelA / SpoT proteins KCU58_14810 PF13291 ACT domain KCU58_14825 PF12706 Beta-lactamase superfamily domain KCU58_14830 PF03070 TENA/THI-4/PQQC family KCU58_14835 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KCU58_14840 PF04055 Radical SAM superfamily KCU58_14840 PF13186 Iron-sulfur cluster-binding domain KCU58_14850 PF00654 Voltage gated chloride channel KCU58_14855 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KCU58_14855 PF11898 Domain of unknown function (DUF3418) KCU58_14855 PF04408 Helicase associated domain (HA2) KCU58_14855 PF00271 Helicase conserved C-terminal domain KCU58_14855 PF00270 DEAD/DEAH box helicase KCU58_14860 PF00210 Ferritin-like domain KCU58_14865 PF09382 RQC domain KCU58_14865 PF16124 RecQ zinc-binding KCU58_14865 PF00271 Helicase conserved C-terminal domain KCU58_14865 PF00270 DEAD/DEAH box helicase KCU58_14865 PF00570 HRDC domain KCU58_14885 PF06508 Queuosine biosynthesis protein QueC KCU58_14890 PF04055 Radical SAM superfamily KCU58_14900 PF00691 OmpA family KCU58_14905 PF04052 TolB amino-terminal domain KCU58_14905 PF07676 WD40-like Beta Propeller Repeat KCU58_14915 PF02472 Biopolymer transport protein ExbD/TolR KCU58_14920 PF01618 MotA/TolQ/ExbB proton channel family KCU58_14925 PF03061 Thioesterase superfamily KCU58_14930 PF17864 RuvB AAA lid domain KCU58_14930 PF05491 RuvB C-terminal winged helix domain KCU58_14930 PF05496 Holliday junction DNA helicase RuvB P-loop domain KCU58_14935 PF02705 K+ potassium transporter KCU58_14940 PF01330 RuvA N terminal domain KCU58_14940 PF07499 RuvA, C-terminal domain KCU58_14945 PF02075 Crossover junction endodeoxyribonuclease RuvC KCU58_14950 PF01709 Transcriptional regulator KCU58_14970 PF01336 OB-fold nucleic acid binding domain KCU58_14970 PF00152 tRNA synthetases class II (D, K and N) KCU58_14970 PF02938 GAD domain KCU58_14990 PF03932 CutC family KCU58_14995 PF01112 Asparaginase KCU58_15015 PF00072 Response regulator receiver domain KCU58_15015 PF01339 CheB methylesterase KCU58_15020 PF02895 Signal transducing histidine kinase, homodimeric domain KCU58_15020 PF00072 Response regulator receiver domain KCU58_15020 PF01584 CheW-like domain KCU58_15020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_15020 PF01627 Hpt domain KCU58_15025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_15025 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KCU58_15030 PF01584 CheW-like domain KCU58_15035 PF00072 Response regulator receiver domain KCU58_15040 PF00072 Response regulator receiver domain KCU58_15045 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KCU58_15045 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KCU58_15060 PF00814 Glycoprotease family KCU58_15065 PF13307 Helicase C-terminal domain KCU58_15065 PF04851 Type III restriction enzyme, res subunit KCU58_15075 PF14814 Bifunctional transglycosylase second domain KCU58_15075 PF00912 Transglycosylase KCU58_15075 PF00905 Penicillin binding protein transpeptidase domain KCU58_15080 PF00535 Glycosyl transferase family 2 KCU58_15085 PF00730 HhH-GPD superfamily base excision DNA repair protein KCU58_15100 PF00196 Bacterial regulatory proteins, luxR family KCU58_15100 PF00072 Response regulator receiver domain KCU58_15105 PF07730 Histidine kinase KCU58_15115 PF03775 Septum formation inhibitor MinC, C-terminal domain KCU58_15115 PF05209 Septum formation inhibitor MinC, N-terminal domain KCU58_15120 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KCU58_15125 PF03776 Septum formation topological specificity factor MinE KCU58_15135 PF02702 Osmosensitive K+ channel His kinase sensor domain KCU58_15135 PF00512 His Kinase A (phospho-acceptor) domain KCU58_15135 PF13493 Domain of unknown function (DUF4118) KCU58_15135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_15140 PF00072 Response regulator receiver domain KCU58_15140 PF00486 Transcriptional regulatory protein, C terminal KCU58_15150 PF08019 Phosphoethanolamine transferase EptA/EptB KCU58_15150 PF00884 Sulfatase KCU58_15170 PF07690 Major Facilitator Superfamily KCU58_15175 PF00664 ABC transporter transmembrane region KCU58_15175 PF00005 ABC transporter KCU58_15175 PF03412 Peptidase C39 family KCU58_15195 PF02347 Glycine cleavage system P-protein KCU58_15205 PF00199 Catalase KCU58_15205 PF06628 Catalase-related immune-responsive KCU58_15205 PF18011 C-terminal domain found in long catalases KCU58_15215 PF13649 Methyltransferase domain KCU58_15220 PF02585 GlcNAc-PI de-N-acetylase KCU58_15230 PF00107 Zinc-binding dehydrogenase KCU58_15230 PF13823 Alcohol dehydrogenase GroES-associated KCU58_15230 PF08240 Alcohol dehydrogenase GroES-like domain KCU58_15240 PF06165 Glycosyltransferase family 36 KCU58_15240 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain KCU58_15240 PF10091 Putative glucoamylase KCU58_15250 PF17755 UvrA DNA-binding domain KCU58_15285 PF01433 Peptidase family M1 domain KCU58_15300 PF00709 Adenylosuccinate synthetase KCU58_15310 PF01145 SPFH domain / Band 7 family KCU58_15315 PF12221 Bacterial membrane protein N terminal KCU58_15315 PF01145 SPFH domain / Band 7 family KCU58_15320 PF00107 Zinc-binding dehydrogenase KCU58_15320 PF08240 Alcohol dehydrogenase GroES-like domain KCU58_15325 PF00072 Response regulator receiver domain KCU58_15330 PF01556 DnaJ C terminal domain KCU58_15330 PF00226 DnaJ domain KCU58_15340 PF08534 Redoxin KCU58_15350 PF06832 Penicillin-Binding Protein C-terminus Family KCU58_15350 PF00912 Transglycosylase KCU58_15350 PF00905 Penicillin binding protein transpeptidase domain KCU58_15370 PF00207 Alpha-2-macroglobulin family KCU58_15370 PF07703 Alpha-2-macroglobulin bait region domain KCU58_15370 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain KCU58_15370 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain KCU58_15370 PF11974 Bacterial alpha-2-macroglobulin MG3 domain KCU58_15370 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain KCU58_15370 PF17962 Bacterial macroglobulin domain 6 KCU58_15370 PF01835 MG2 domain KCU58_15380 PF07715 TonB-dependent Receptor Plug Domain KCU58_15380 PF00593 TonB dependent receptor KCU58_15385 PF04303 PrpF protein KCU58_15395 PF00330 Aconitase family (aconitate hydratase) KCU58_15395 PF00694 Aconitase C-terminal domain KCU58_15400 PF00285 Citrate synthase, C-terminal domain KCU58_15410 PF00285 Citrate synthase, C-terminal domain KCU58_15415 PF01726 LexA DNA binding domain KCU58_15415 PF00717 Peptidase S24-like KCU58_15430 PF07733 Bacterial DNA polymerase III alpha NTPase domain KCU58_15430 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KCU58_15430 PF14579 Helix-hairpin-helix motif KCU58_15430 PF02811 PHP domain KCU58_15430 PF01336 OB-fold nucleic acid binding domain KCU58_15460 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KCU58_15460 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KCU58_15465 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system KCU58_15470 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system KCU58_15485 PF09115 DNA polymerase III, delta subunit, C terminal KCU58_15490 PF02223 Thymidylate kinase KCU58_15495 PF02618 YceG-like family KCU58_15500 PF00425 chorismate binding enzyme KCU58_15500 PF04715 Anthranilate synthase component I, N terminal region KCU58_15505 PF00109 Beta-ketoacyl synthase, N-terminal domain KCU58_15505 PF02801 Beta-ketoacyl synthase, C-terminal domain KCU58_15510 PF00550 Phosphopantetheine attachment site KCU58_15520 PF00698 Acyl transferase domain KCU58_15525 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KCU58_15525 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KCU58_15530 PF01783 Ribosomal L32p protein family KCU58_15535 PF02620 Large ribosomal RNA subunit accumulation protein YceD KCU58_15540 PF02545 Maf-like protein KCU58_15560 PF07726 ATPase family associated with various cellular activities (AAA) KCU58_15560 PF17863 AAA lid domain KCU58_15570 PF11992 Domain of unknown function (DUF3488) KCU58_15570 PF13559 Domain of unknown function (DUF4129) KCU58_15570 PF01841 Transglutaminase-like superfamily KCU58_15580 PF01230 HIT domain KCU58_15585 PF02132 RecR protein KCU58_15585 PF13662 Toprim domain KCU58_15590 PF02575 YbaB/EbfC DNA-binding family KCU58_15595 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KCU58_15595 PF12169 DNA polymerase III subunits gamma and tau domain III KCU58_15595 PF12170 DNA polymerase III tau subunit V interacting with alpha KCU58_15620 PF02391 MoaE protein KCU58_15625 PF02597 ThiS family KCU58_15630 PF01967 MoaC family KCU58_15640 PF06463 Molybdenum Cofactor Synthesis C KCU58_15640 PF04055 Radical SAM superfamily KCU58_15645 PF12706 Beta-lactamase superfamily domain KCU58_15655 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KCU58_15680 PF00929 Exonuclease KCU58_15685 PF00075 RNase H KCU58_15695 PF16123 Hydroxyacylglutathione hydrolase C-terminus KCU58_15695 PF00753 Metallo-beta-lactamase superfamily KCU58_15700 PF01476 LysM domain KCU58_15700 PF05257 CHAP domain KCU58_15725 PF00216 Bacterial DNA-binding protein KCU58_15730 PF00004 ATPase family associated with various cellular activities (AAA) KCU58_15730 PF05362 Lon protease (S16) C-terminal proteolytic domain KCU58_15730 PF02190 ATP-dependent protease La (LON) substrate-binding domain KCU58_15735 PF07724 AAA domain (Cdc48 subfamily) KCU58_15735 PF10431 C-terminal, D2-small domain, of ClpB protein KCU58_15735 PF06689 ClpX C4-type zinc finger KCU58_15740 PF00574 Clp protease KCU58_15745 PF05698 Bacterial trigger factor protein (TF) C-terminus KCU58_15745 PF05697 Bacterial trigger factor protein (TF) KCU58_15785 PF00180 Isocitrate/isopropylmalate dehydrogenase KCU58_15785 PF18324 Hypothetical protein TT1725 KCU58_15795 PF00462 Glutaredoxin KCU58_15800 PF13181 Tetratricopeptide repeat KCU58_15800 PF01435 Peptidase family M48 KCU58_15805 PF00072 Response regulator receiver domain KCU58_15805 PF00486 Transcriptional regulatory protein, C terminal KCU58_15810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_15810 PF00512 His Kinase A (phospho-acceptor) domain KCU58_15810 PF11808 Phosphate regulon sensor protein PhoR KCU58_15810 PF00989 PAS fold KCU58_15815 PF13090 Polyphosphate kinase C-terminal domain 2 KCU58_15815 PF17941 Polyphosphate kinase C-terminal domain 1 KCU58_15815 PF13089 Polyphosphate kinase N-terminal domain KCU58_15815 PF02503 Polyphosphate kinase middle domain KCU58_15820 PF02541 Ppx/GppA phosphatase family KCU58_15825 PF13439 Glycosyltransferase Family 4 KCU58_15825 PF00534 Glycosyl transferases group 1 KCU58_15830 PF01569 PAP2 superfamily KCU58_15835 PF00149 Calcineurin-like phosphoesterase KCU58_15850 PF04305 Protein of unknown function (DUF455) KCU58_15855 PF00156 Phosphoribosyl transferase domain KCU58_15870 PF08245 Mur ligase middle domain KCU58_15870 PF02875 Mur ligase family, glutamate ligase domain KCU58_15875 PF00300 Histidine phosphatase superfamily (branch 1) KCU58_15880 PF10459 Peptidase S46 KCU58_15885 PF08240 Alcohol dehydrogenase GroES-like domain KCU58_15885 PF00107 Zinc-binding dehydrogenase KCU58_15895 PF00005 ABC transporter KCU58_15895 PF17850 CysA C-terminal regulatory domain KCU58_15895 PF12857 TOBE-like domain KCU58_15900 PF00528 Binding-protein-dependent transport system inner membrane component KCU58_15905 PF00528 Binding-protein-dependent transport system inner membrane component KCU58_15915 PF00155 Aminotransferase class I and II KCU58_15920 PF00849 RNA pseudouridylate synthase KCU58_15930 PF00223 Photosystem I psaA/psaB protein KCU58_15930 PF00691 OmpA family KCU58_15940 PF07690 Major Facilitator Superfamily KCU58_15955 PF00248 Aldo/keto reductase family KCU58_15960 PF08240 Alcohol dehydrogenase GroES-like domain KCU58_15960 PF00107 Zinc-binding dehydrogenase KCU58_15965 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KCU58_15965 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU58_15990 PF03009 Glycerophosphoryl diester phosphodiesterase family KCU58_16010 PF00043 Glutathione S-transferase, C-terminal domain KCU58_16010 PF02798 Glutathione S-transferase, N-terminal domain KCU58_16025 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KCU58_16025 PF00056 lactate/malate dehydrogenase, NAD binding domain KCU58_16035 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KCU58_16040 PF00679 Elongation factor G C-terminus KCU58_16040 PF00009 Elongation factor Tu GTP binding domain KCU58_16040 PF03144 Elongation factor Tu domain 2 KCU58_16055 PF01474 Class-II DAHP synthetase family KCU58_16065 PF02600 Disulfide bond formation protein DsbB KCU58_16070 PF01196 Ribosomal protein L17 KCU58_16075 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KCU58_16075 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KCU58_16075 PF01000 RNA polymerase Rpb3/RpoA insert domain KCU58_16080 PF00163 Ribosomal protein S4/S9 N-terminal domain KCU58_16080 PF01479 S4 domain KCU58_16085 PF00411 Ribosomal protein S11 KCU58_16090 PF00416 Ribosomal protein S13/S18 KCU58_16095 PF00344 SecY translocase KCU58_16100 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KCU58_16105 PF00327 Ribosomal protein L30p/L7e KCU58_16110 PF00333 Ribosomal protein S5, N-terminal domain KCU58_16110 PF03719 Ribosomal protein S5, C-terminal domain KCU58_16115 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KCU58_16120 PF00347 Ribosomal protein L6 KCU58_16125 PF00410 Ribosomal protein S8 KCU58_16130 PF00253 Ribosomal protein S14p/S29e KCU58_16135 PF00281 Ribosomal protein L5 KCU58_16135 PF00673 ribosomal L5P family C-terminus KCU58_16140 PF00467 KOW motif KCU58_16140 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KCU58_16145 PF00238 Ribosomal protein L14p/L23e KCU58_16150 PF00366 Ribosomal protein S17 KCU58_16155 PF00831 Ribosomal L29 protein KCU58_16160 PF00252 Ribosomal protein L16p/L10e KCU58_16165 PF07650 KH domain KCU58_16165 PF00189 Ribosomal protein S3, C-terminal domain KCU58_16170 PF00237 Ribosomal protein L22p/L17e KCU58_16175 PF00203 Ribosomal protein S19 KCU58_16180 PF00181 Ribosomal Proteins L2, RNA binding domain KCU58_16180 PF03947 Ribosomal Proteins L2, C-terminal domain KCU58_16185 PF00276 Ribosomal protein L23 KCU58_16190 PF00573 Ribosomal protein L4/L1 family KCU58_16195 PF00297 Ribosomal protein L3 KCU58_16200 PF00338 Ribosomal protein S10p/S20e KCU58_16205 PF00009 Elongation factor Tu GTP binding domain KCU58_16205 PF03144 Elongation factor Tu domain 2 KCU58_16205 PF03143 Elongation factor Tu C-terminal domain KCU58_16210 PF00679 Elongation factor G C-terminus KCU58_16210 PF14492 Elongation Factor G, domain II KCU58_16210 PF03764 Elongation factor G, domain IV KCU58_16210 PF00009 Elongation factor Tu GTP binding domain KCU58_16210 PF03144 Elongation factor Tu domain 2 KCU58_16215 PF00177 Ribosomal protein S7p/S5e KCU58_16220 PF00164 Ribosomal protein S12/S23 KCU58_16225 PF00623 RNA polymerase Rpb1, domain 2 KCU58_16225 PF04997 RNA polymerase Rpb1, domain 1 KCU58_16225 PF04983 RNA polymerase Rpb1, domain 3 KCU58_16225 PF05000 RNA polymerase Rpb1, domain 4 KCU58_16225 PF04998 RNA polymerase Rpb1, domain 5 KCU58_16230 PF04563 RNA polymerase beta subunit KCU58_16230 PF04561 RNA polymerase Rpb2, domain 2 KCU58_16230 PF04565 RNA polymerase Rpb2, domain 3 KCU58_16230 PF10385 RNA polymerase beta subunit external 1 domain KCU58_16230 PF00562 RNA polymerase Rpb2, domain 6 KCU58_16230 PF04560 RNA polymerase Rpb2, domain 7 KCU58_16235 PF16320 Ribosomal protein L7/L12 dimerisation domain KCU58_16235 PF00542 Ribosomal protein L7/L12 C-terminal domain KCU58_16240 PF00466 Ribosomal protein L10 KCU58_16245 PF00687 Ribosomal protein L1p/L10e family KCU58_16250 PF00298 Ribosomal protein L11, RNA binding domain KCU58_16250 PF03946 Ribosomal protein L11, N-terminal domain KCU58_16255 PF00467 KOW motif KCU58_16255 PF02357 Transcription termination factor nusG KCU58_16260 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KCU58_16270 PF03144 Elongation factor Tu domain 2 KCU58_16270 PF03143 Elongation factor Tu C-terminal domain KCU58_16270 PF00009 Elongation factor Tu GTP binding domain KCU58_16290 PF01926 50S ribosome-binding GTPase KCU58_16290 PF06071 Protein of unknown function (DUF933) KCU58_16295 PF01195 Peptidyl-tRNA hydrolase KCU58_16300 PF01386 Ribosomal L25p family KCU58_16300 PF14693 Ribosomal protein TL5, C-terminal domain KCU58_16305 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KCU58_16305 PF14572 Phosphoribosyl synthetase-associated domain KCU58_16315 PF00288 GHMP kinases N terminal domain KCU58_16315 PF08544 GHMP kinases C terminal KCU58_16320 PF03550 Outer membrane lipoprotein LolB KCU58_16330 PF01488 Shikimate / quinate 5-dehydrogenase KCU58_16330 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KCU58_16330 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KCU58_16335 PF00472 RF-1 domain KCU58_16335 PF03462 PCRF domain KCU58_16360 PF04185 Phosphoesterase family KCU58_16360 PF05506 Domain of unknown function (DUF756) KCU58_16375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU58_16375 PF03466 LysR substrate binding domain KCU58_16385 PF00005 ABC transporter KCU58_16385 PF12848 ABC transporter KCU58_16390 PF07715 TonB-dependent Receptor Plug Domain KCU58_16390 PF00593 TonB dependent receptor KCU58_16395 PF00593 TonB dependent receptor KCU58_16395 PF07715 TonB-dependent Receptor Plug Domain KCU58_16415 PF17827 PrmC N-terminal domain KCU58_16415 PF05175 Methyltransferase small domain KCU58_16420 PF00578 AhpC/TSA family KCU58_16420 PF10417 C-terminal domain of 1-Cys peroxiredoxin KCU58_16425 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU58_16425 PF13192 Thioredoxin domain KCU58_16430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU58_16430 PF03466 LysR substrate binding domain KCU58_16440 PF01272 Transcription elongation factor, GreA/GreB, C-term KCU58_16440 PF14760 Rnk N-terminus KCU58_16445 PF00923 Transaldolase/Fructose-6-phosphate aldolase KCU58_16450 PF01625 Peptide methionine sulfoxide reductase KCU58_16475 PF00749 tRNA synthetases class I (E and Q), catalytic domain KCU58_16475 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KCU58_16480 PF00892 EamA-like transporter family KCU58_16500 PF01728 FtsJ-like methyltransferase KCU58_16500 PF18125 RlmM ferredoxin-like domain KCU58_16505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KCU58_16505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KCU58_16520 PF01494 FAD binding domain KCU58_16525 PF01494 FAD binding domain KCU58_16535 PF01923 Cobalamin adenosyltransferase KCU58_16540 PF00850 Histone deacetylase domain KCU58_16545 PF03968 OstA-like protein KCU58_16545 PF04453 LPS transport system D KCU58_16550 PF00639 PPIC-type PPIASE domain KCU58_16550 PF09312 SurA N-terminal domain KCU58_16555 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KCU58_16560 PF00398 Ribosomal RNA adenine dimethylase KCU58_16565 PF04379 ApaG domain KCU58_16570 PF00149 Calcineurin-like phosphoesterase KCU58_16580 PF13333 Integrase core domain KCU58_16580 PF00665 Integrase core domain KCU58_16580 PF13276 HTH-like domain KCU58_16585 PF01527 Transposase KCU58_16620 PF07715 TonB-dependent Receptor Plug Domain KCU58_16620 PF00593 TonB dependent receptor KCU58_16630 PF00392 Bacterial regulatory proteins, gntR family KCU58_16630 PF07702 UTRA domain KCU58_16640 PF00263 Bacterial type II and III secretion system protein KCU58_16640 PF03958 Bacterial type II/III secretion system short domain KCU58_16650 PF10741 Type II secretion system (T2SS), protein M subtype b KCU58_16655 PF05137 Fimbrial assembly protein (PilN) KCU58_16660 PF03934 Type II secretion system (T2SS), protein K KCU58_16670 PF07963 Prokaryotic N-terminal methylation motif KCU58_16675 PF12019 Type II transport protein GspH KCU58_16680 PF08334 Type II secretion system (T2SS), protein G KCU58_16685 PF00482 Type II secretion system (T2SS), protein F KCU58_16690 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KCU58_16690 PF00437 Type II/IV secretion system protein KCU58_16695 PF00082 Subtilase family KCU58_16695 PF04151 Bacterial pre-peptidase C-terminal domain KCU58_16700 PF13018 Extended Signal Peptide of Type V secretion system KCU58_16700 PF03895 YadA-like membrane anchor domain KCU58_16700 PF05658 Head domain of trimeric autotransporter adhesin KCU58_16700 PF05662 Coiled stalk of trimeric autotransporter adhesin KCU58_16710 PF02203 Tar ligand binding domain homologue KCU58_16710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_16710 PF00672 HAMP domain KCU58_16715 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KCU58_16715 PF02769 AIR synthase related protein, C-terminal domain KCU58_16715 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KCU58_16720 PF13098 Thioredoxin-like domain KCU58_16720 PF10411 Disulfide bond isomerase protein N-terminus KCU58_16725 PF02899 Phage integrase, N-terminal SAM-like domain KCU58_16725 PF00589 Phage integrase family KCU58_16750 PF00883 Cytosol aminopeptidase family, catalytic domain KCU58_16750 PF02789 Cytosol aminopeptidase family, N-terminal domain KCU58_16755 PF04364 DNA polymerase III chi subunit, HolC KCU58_16770 PF10458 Valyl tRNA synthetase tRNA binding arm KCU58_16770 PF08264 Anticodon-binding domain of tRNA KCU58_16770 PF00133 tRNA synthetases class I (I, L, M and V) KCU58_16790 PF01066 CDP-alcohol phosphatidyltransferase KCU58_16800 PF03129 Anticodon binding domain KCU58_16800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KCU58_16800 PF04073 Aminoacyl-tRNA editing domain KCU58_16805 PF00816 H-NS histone family KCU58_16815 PF02405 Permease MlaE KCU58_16820 PF00005 ABC transporter KCU58_16825 PF02470 MlaD protein KCU58_16825 PF03886 ABC-type transport auxiliary lipoprotein component KCU58_16845 PF05045 Rhamnan synthesis protein F KCU58_16845 PF14307 Glycosyltransferase WbsX KCU58_16850 PF01144 Coenzyme A transferase KCU58_16855 PF01144 Coenzyme A transferase KCU58_16860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KCU58_16860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KCU58_16860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KCU58_16860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KCU58_16865 PF01050 Mannose-6-phosphate isomerase KCU58_16865 PF00483 Nucleotidyl transferase KCU58_16870 PF04321 RmlD substrate binding domain KCU58_16875 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KCU58_16880 PF00483 Nucleotidyl transferase KCU58_16885 PF16363 GDP-mannose 4,6 dehydratase KCU58_16890 PF01012 Electron transfer flavoprotein domain KCU58_16895 PF01012 Electron transfer flavoprotein domain KCU58_16895 PF00766 Electron transfer flavoprotein FAD-binding domain KCU58_16905 PF01040 UbiA prenyltransferase family KCU58_16910 PF04030 D-arabinono-1,4-lactone oxidase KCU58_16910 PF01565 FAD binding domain KCU58_16915 PF00106 short chain dehydrogenase KCU58_16920 PF01370 NAD dependent epimerase/dehydratase family KCU58_16940 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KCU58_16940 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU58_16980 PF00535 Glycosyl transferase family 2 KCU58_16985 PF00535 Glycosyl transferase family 2 KCU58_16990 PF00398 Ribosomal RNA adenine dimethylase KCU58_16995 PF00005 ABC transporter KCU58_17005 PF01053 Cys/Met metabolism PLP-dependent enzyme KCU58_17010 PF00571 CBS domain KCU58_17010 PF00291 Pyridoxal-phosphate dependent enzyme KCU58_17030 PF00437 Type II/IV secretion system protein KCU58_17035 PF14497 Glutathione S-transferase, C-terminal domain KCU58_17035 PF02798 Glutathione S-transferase, N-terminal domain KCU58_17045 PF00271 Helicase conserved C-terminal domain KCU58_17045 PF00270 DEAD/DEAH box helicase KCU58_17050 PF01242 6-pyruvoyl tetrahydropterin synthase KCU58_17065 PF13185 GAF domain KCU58_17075 PF07715 TonB-dependent Receptor Plug Domain KCU58_17075 PF00593 TonB dependent receptor KCU58_17080 PF13419 Haloacid dehalogenase-like hydrolase KCU58_17085 PF11799 impB/mucB/samB family C-terminal domain KCU58_17085 PF11798 IMS family HHH motif KCU58_17085 PF00817 impB/mucB/samB family KCU58_17090 PF07977 FabA-like domain KCU58_17095 PF00109 Beta-ketoacyl synthase, N-terminal domain KCU58_17095 PF02801 Beta-ketoacyl synthase, C-terminal domain KCU58_17105 PF01432 Peptidase family M3 KCU58_17120 PF00403 Heavy-metal-associated domain KCU58_17125 PF00376 MerR family regulatory protein KCU58_17125 PF09278 MerR, DNA binding KCU58_17135 PF07732 Multicopper oxidase KCU58_17135 PF07731 Multicopper oxidase KCU58_17135 PF00394 Multicopper oxidase KCU58_17140 PF05275 Copper resistance protein B precursor (CopB) KCU58_17150 PF01380 SIS domain KCU58_17155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KCU58_17160 PF00005 ABC transporter KCU58_17165 PF00005 ABC transporter KCU58_17165 PF12704 MacB-like periplasmic core domain KCU58_17165 PF02687 FtsX-like permease family KCU58_17170 PF12704 MacB-like periplasmic core domain KCU58_17170 PF00005 ABC transporter KCU58_17170 PF02687 FtsX-like permease family KCU58_17175 PF02687 FtsX-like permease family KCU58_17175 PF12704 MacB-like periplasmic core domain KCU58_17175 PF00005 ABC transporter KCU58_17180 PF00005 ABC transporter KCU58_17180 PF02687 FtsX-like permease family KCU58_17180 PF12704 MacB-like periplasmic core domain KCU58_17190 PF02954 Bacterial regulatory protein, Fis family KCU58_17190 PF00072 Response regulator receiver domain KCU58_17190 PF00158 Sigma-54 interaction domain KCU58_17195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_17195 PF00512 His Kinase A (phospho-acceptor) domain KCU58_17195 PF00989 PAS fold KCU58_17205 PF00132 Bacterial transferase hexapeptide (six repeats) KCU58_17205 PF14602 Hexapeptide repeat of succinyl-transferase KCU58_17205 PF12804 MobA-like NTP transferase domain KCU58_17220 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KCU58_17220 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KCU58_17225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KCU58_17225 PF02874 ATP synthase alpha/beta family, beta-barrel domain KCU58_17230 PF00231 ATP synthase KCU58_17235 PF00306 ATP synthase alpha/beta chain, C terminal domain KCU58_17235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KCU58_17235 PF02874 ATP synthase alpha/beta family, beta-barrel domain KCU58_17240 PF00213 ATP synthase delta (OSCP) subunit KCU58_17245 PF00430 ATP synthase B/B' CF(0) KCU58_17250 PF00137 ATP synthase subunit C KCU58_17255 PF00119 ATP synthase A chain KCU58_17270 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU58_17270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KCU58_17275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KCU58_17275 PF00364 Biotin-requiring enzyme KCU58_17275 PF02817 e3 binding domain KCU58_17300 PF03180 NLPA lipoprotein KCU58_17305 PF00528 Binding-protein-dependent transport system inner membrane component KCU58_17310 PF00005 ABC transporter KCU58_17310 PF09383 NIL domain KCU58_17315 PF00892 EamA-like transporter family KCU58_17320 PF04461 Protein of unknown function (DUF520) KCU58_17330 PF00849 RNA pseudouridylate synthase KCU58_17330 PF01479 S4 domain KCU58_17335 PF05175 Methyltransferase small domain KCU58_17335 PF08468 Methyltransferase small domain N-terminal KCU58_17345 PF07995 Glucose / Sorbosone dehydrogenase KCU58_17355 PF00512 His Kinase A (phospho-acceptor) domain KCU58_17355 PF01627 Hpt domain KCU58_17355 PF00989 PAS fold KCU58_17355 PF00072 Response regulator receiver domain KCU58_17355 PF00497 Bacterial extracellular solute-binding proteins, family 3 KCU58_17355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_17375 PF00842 Alanine racemase, C-terminal domain KCU58_17375 PF01168 Alanine racemase, N-terminal domain KCU58_17380 PF01266 FAD dependent oxidoreductase KCU58_17385 PF01037 Lrp/AsnC ligand binding domain KCU58_17400 PF01641 SelR domain KCU58_17405 PF01618 MotA/TolQ/ExbB proton channel family KCU58_17410 PF13677 Membrane MotB of proton-channel complex MotA/MotB KCU58_17410 PF00691 OmpA family KCU58_17455 PF01061 ABC-2 type transporter KCU58_17460 PF00005 ABC transporter KCU58_17465 PF00999 Sodium/hydrogen exchanger family KCU58_17470 PF05711 Macrocin-O-methyltransferase (TylF) KCU58_17475 PF02469 Fasciclin domain KCU58_17480 PF03167 Uracil DNA glycosylase superfamily KCU58_17490 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KCU58_17495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU58_17495 PF03466 LysR substrate binding domain KCU58_17500 PF03358 NADPH-dependent FMN reductase KCU58_17515 PF00248 Aldo/keto reductase family KCU58_17525 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KCU58_17525 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KCU58_17530 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KCU58_17550 PF17151 Periplasmic sensor domain KCU58_17550 PF00990 Diguanylate cyclase, GGDEF domain KCU58_17555 PF00355 Rieske [2Fe-2S] domain KCU58_17560 PF08447 PAS fold KCU58_17560 PF08448 PAS fold KCU58_17560 PF00563 EAL domain KCU58_17560 PF00990 Diguanylate cyclase, GGDEF domain KCU58_17580 PF08889 WbqC-like protein family KCU58_17585 PF00535 Glycosyl transferase family 2 KCU58_17590 PF13649 Methyltransferase domain KCU58_17600 PF00892 EamA-like transporter family KCU58_17610 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KCU58_17620 PF07715 TonB-dependent Receptor Plug Domain KCU58_17620 PF00593 TonB dependent receptor KCU58_17630 PF04397 LytTr DNA-binding domain KCU58_17630 PF00072 Response regulator receiver domain KCU58_17635 PF06580 Histidine kinase KCU58_17635 PF07694 5TMR of 5TMR-LYT KCU58_17660 PF13520 Amino acid permease KCU58_17670 PF00150 Cellulase (glycosyl hydrolase family 5) KCU58_17670 PF00553 Cellulose binding domain KCU58_17680 PF01204 Trehalase KCU58_17685 PF01464 Transglycosylase SLT domain KCU58_17700 PF06719 AraC-type transcriptional regulator N-terminus KCU58_17700 PF12833 Helix-turn-helix domain KCU58_17710 PF01544 CorA-like Mg2+ transporter protein KCU58_17715 PF00324 Amino acid permease KCU58_17720 PF00892 EamA-like transporter family KCU58_17730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU58_17730 PF03466 LysR substrate binding domain KCU58_17735 PF07759 Protein of unknown function (DUF1615) KCU58_17740 PF08533 Beta-galactosidase C-terminal domain KCU58_17740 PF08532 Beta-galactosidase trimerisation domain KCU58_17740 PF02449 Beta-galactosidase KCU58_17745 PF17189 Glycosyl hydrolase family 30 beta sandwich domain KCU58_17840 PF00145 C-5 cytosine-specific DNA methylase KCU58_17845 PF00145 C-5 cytosine-specific DNA methylase KCU58_17850 PF17831 Pyruvate dehydrogenase E1 component middle domain KCU58_17850 PF00456 Transketolase, thiamine diphosphate binding domain KCU58_17855 PF02743 Cache domain KCU58_17855 PF00672 HAMP domain KCU58_17855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU58_17870 PF04264 YceI-like domain KCU58_17875 PF00881 Nitroreductase family KCU58_17900 PF03009 Glycerophosphoryl diester phosphodiesterase family KCU58_17915 PF03710 Glutamate-ammonia ligase adenylyltransferase KCU58_17915 PF08335 GlnD PII-uridylyltransferase KCU58_17925 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KCU58_17925 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KCU58_17930 PF01541 GIY-YIG catalytic domain KCU58_17935 PF00793 DAHP synthetase I family KCU58_17955 PF01555 DNA methylase KCU58_17960 PF13749 Putative ATP-dependent DNA helicase recG C-terminal KCU58_17960 PF17191 RecG wedge domain KCU58_17960 PF00270 DEAD/DEAH box helicase KCU58_17965 PF00271 Helicase conserved C-terminal domain KCU58_17965 PF00176 SNF2 family N-terminal domain KCU58_17970 PF00118 TCP-1/cpn60 chaperonin family KCU58_17975 PF00166 Chaperonin 10 Kd subunit KCU58_17985 PF03091 CutA1 divalent ion tolerance protein KCU58_17990 PF11412 Disulphide bond corrector protein DsbC KCU58_17990 PF02683 Cytochrome C biogenesis protein transmembrane region KCU58_17995 PF00578 AhpC/TSA family KCU58_18005 PF01220 Dehydroquinase class II KCU58_18010 PF00364 Biotin-requiring enzyme KCU58_18015 PF02785 Biotin carboxylase C-terminal domain KCU58_18015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KCU58_18015 PF00289 Biotin carboxylase, N-terminal domain KCU58_18040 PF01381 Helix-turn-helix KCU58_18050 PF02954 Bacterial regulatory protein, Fis family KCU58_18075 PF12146 Serine aminopeptidase, S33 KCU58_18075 PF12147 Putative methyltransferase KCU58_18080 PF01066 CDP-alcohol phosphatidyltransferase KCU58_18085 PF01808 AICARFT/IMPCHase bienzyme KCU58_18085 PF02142 MGS-like domain KCU58_18090 PF02843 Phosphoribosylglycinamide synthetase, C domain KCU58_18090 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KCU58_18090 PF02844 Phosphoribosylglycinamide synthetase, N domain KCU58_18095 PF12805 FUSC-like inner membrane protein yccS KCU58_18100 PF07690 Major Facilitator Superfamily KCU58_18105 PF03466 LysR substrate binding domain KCU58_18105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU58_18140 PF00293 NUDIX domain KCU58_18140 PF09297 NADH pyrophosphatase zinc ribbon domain KCU58_18140 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain KCU58_18145 PF01521 Iron-sulphur cluster biosynthesis KCU58_18165 PF00072 Response regulator receiver domain KCU58_18165 PF00990 Diguanylate cyclase, GGDEF domain KCU58_18165 PF00563 EAL domain KCU58_18170 PF00512 His Kinase A (phospho-acceptor) domain KCU58_18170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_18170 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KCU58_18170 PF00672 HAMP domain KCU58_18170 PF01627 Hpt domain KCU58_18170 PF00072 Response regulator receiver domain KCU58_18175 PF00210 Ferritin-like domain KCU58_18180 PF04324 BFD-like [2Fe-2S] binding domain KCU58_18185 PF00293 NUDIX domain KCU58_18200 PF00380 Ribosomal protein S9/S16 KCU58_18205 PF00572 Ribosomal protein L13 KCU58_18210 PF03232 Ubiquinone biosynthesis protein COQ7 KCU58_18220 PF00893 Small Multidrug Resistance protein KCU58_18225 PF02675 S-adenosylmethionine decarboxylase KCU58_18230 PF00027 Cyclic nucleotide-binding domain KCU58_18230 PF00325 Bacterial regulatory proteins, crp family KCU58_18235 PF01925 Sulfite exporter TauE/SafE KCU58_18250 PF00218 Indole-3-glycerol phosphate synthase KCU58_18255 PF00591 Glycosyl transferase family, a/b domain KCU58_18255 PF02885 Glycosyl transferase family, helical bundle domain KCU58_18260 PF00117 Glutamine amidotransferase class-I KCU58_18270 PF04715 Anthranilate synthase component I, N terminal region KCU58_18270 PF00425 chorismate binding enzyme KCU58_18275 PF00781 Diacylglycerol kinase catalytic domain KCU58_18280 PF00583 Acetyltransferase (GNAT) family KCU58_18285 PF00834 Ribulose-phosphate 3 epimerase family KCU58_18290 PF00226 DnaJ domain KCU58_18290 PF05099 Tellurite resistance protein TerB KCU58_18295 PF01259 SAICAR synthetase KCU58_18305 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KCU58_18310 PF00361 Proton-conducting membrane transporter KCU58_18310 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KCU58_18310 PF13244 Domain of unknown function (DUF4040) KCU58_18310 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KCU58_18315 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KCU58_18320 PF00361 Proton-conducting membrane transporter KCU58_18325 PF01899 Na+/H+ ion antiporter subunit KCU58_18330 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KCU58_18335 PF03334 Na+/H+ antiporter subunit KCU58_18340 PF01699 Sodium/calcium exchanger protein KCU58_18355 PF04209 homogentisate 1,2-dioxygenase KCU58_18360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KCU58_18375 PF00854 POT family KCU58_18380 PF03301 Tryptophan 2,3-dioxygenase KCU58_18395 PF00676 Dehydrogenase E1 component KCU58_18400 PF02779 Transketolase, pyrimidine binding domain KCU58_18400 PF02780 Transketolase, C-terminal domain KCU58_18410 PF00364 Biotin-requiring enzyme KCU58_18410 PF02817 e3 binding domain KCU58_18410 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KCU58_18440 PF00271 Helicase conserved C-terminal domain KCU58_18440 PF00270 DEAD/DEAH box helicase KCU58_18455 PF00294 pfkB family carbohydrate kinase KCU58_18460 PF00990 Diguanylate cyclase, GGDEF domain KCU58_18465 PF05661 Protein of unknown function (DUF808) KCU58_18470 PF02733 Dak1 domain KCU58_18470 PF02734 DAK2 domain KCU58_18490 PF00924 Mechanosensitive ion channel KCU58_18490 PF12795 Mechanosensitive ion channel porin domain KCU58_18490 PF12794 Mechanosensitive ion channel inner membrane domain 1 KCU58_18495 PF00107 Zinc-binding dehydrogenase KCU58_18495 PF00698 Acyl transferase domain KCU58_18495 PF08240 Alcohol dehydrogenase GroES-like domain KCU58_18495 PF16197 Ketoacyl-synthetase C-terminal extension KCU58_18495 PF08659 KR domain KCU58_18495 PF02801 Beta-ketoacyl synthase, C-terminal domain KCU58_18495 PF00550 Phosphopantetheine attachment site KCU58_18495 PF14765 Polyketide synthase dehydratase KCU58_18495 PF00109 Beta-ketoacyl synthase, N-terminal domain KCU58_18500 PF00328 Histidine phosphatase superfamily (branch 2) KCU58_18515 PF04542 Sigma-70 region 2 KCU58_18515 PF08281 Sigma-70, region 4 KCU58_18515 PF12680 SnoaL-like domain KCU58_18520 PF02678 Pirin KCU58_18520 PF05726 Pirin C-terminal cupin domain KCU58_18530 PF07729 FCD domain KCU58_18530 PF00392 Bacterial regulatory proteins, gntR family KCU58_18545 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KCU58_18550 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG KCU58_18560 PF01039 Carboxyl transferase domain KCU58_18565 PF06857 Malonate decarboxylase delta subunit (MdcD) KCU58_18570 PF16957 Malonate decarboxylase, alpha subunit, transporter KCU58_18575 PF09339 IclR helix-turn-helix domain KCU58_18575 PF01614 Bacterial transcriptional regulator KCU58_18580 PF07690 Major Facilitator Superfamily KCU58_18585 PF05336 L-rhamnose mutarotase KCU58_18590 PF13378 Enolase C-terminal domain-like KCU58_18590 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KCU58_18595 PF01557 Fumarylacetoacetate (FAA) hydrolase family KCU58_18610 PF00248 Aldo/keto reductase family KCU58_18615 PF13419 Haloacid dehalogenase-like hydrolase KCU58_18630 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KCU58_18630 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KCU58_18635 PF00230 Major intrinsic protein KCU58_18640 PF01266 FAD dependent oxidoreductase KCU58_18640 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KCU58_18645 PF00455 DeoR C terminal sensor domain KCU58_18645 PF08220 DeoR-like helix-turn-helix domain KCU58_18650 PF07308 Protein of unknown function (DUF1456) KCU58_18670 PF07715 TonB-dependent Receptor Plug Domain KCU58_18670 PF07660 Secretin and TonB N terminus short domain KCU58_18670 PF00593 TonB dependent receptor KCU58_18675 PF07715 TonB-dependent Receptor Plug Domain KCU58_18675 PF00593 TonB dependent receptor KCU58_18680 PF07715 TonB-dependent Receptor Plug Domain KCU58_18680 PF07660 Secretin and TonB N terminus short domain KCU58_18680 PF00593 TonB dependent receptor KCU58_18695 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KCU58_18695 PF00326 Prolyl oligopeptidase family KCU58_18715 PF07715 TonB-dependent Receptor Plug Domain KCU58_18715 PF00593 TonB dependent receptor KCU58_18755 PF13180 PDZ domain KCU58_18755 PF00595 PDZ domain KCU58_18775 PF01594 AI-2E family transporter KCU58_18780 PF13419 Haloacid dehalogenase-like hydrolase KCU58_18785 PF00883 Cytosol aminopeptidase family, catalytic domain KCU58_18785 PF02789 Cytosol aminopeptidase family, N-terminal domain KCU58_18790 PF00199 Catalase KCU58_18805 PF00665 Integrase core domain KCU58_18805 PF13333 Integrase core domain KCU58_18805 PF13276 HTH-like domain KCU58_18810 PF01527 Transposase KCU58_18815 PF00005 ABC transporter KCU58_18820 PF12704 MacB-like periplasmic core domain KCU58_18820 PF02687 FtsX-like permease family KCU58_18835 PF00892 EamA-like transporter family KCU58_18840 PF00892 EamA-like transporter family KCU58_18850 PF00753 Metallo-beta-lactamase superfamily KCU58_18855 PF00579 tRNA synthetases class I (W and Y) KCU58_18890 PF03309 Type III pantothenate kinase KCU58_18895 PF03099 Biotin/lipoate A/B protein ligase family KCU58_18895 PF02237 Biotin protein ligase C terminal domain KCU58_18905 PF06167 Glucose-regulated metallo-peptidase M90 KCU58_18920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_18925 PF00072 Response regulator receiver domain KCU58_18925 PF00486 Transcriptional regulatory protein, C terminal KCU58_18935 PF01207 Dihydrouridine synthase (Dus) KCU58_18940 PF08267 Cobalamin-independent synthase, N-terminal domain KCU58_18940 PF01717 Cobalamin-independent synthase, Catalytic domain KCU58_18950 PF00551 Formyl transferase KCU58_18960 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KCU58_18960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KCU58_18965 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KCU58_18970 PF02146 Sir2 family KCU58_18975 PF00072 Response regulator receiver domain KCU58_18975 PF00486 Transcriptional regulatory protein, C terminal KCU58_18980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_18980 PF08448 PAS fold KCU58_18980 PF00512 His Kinase A (phospho-acceptor) domain KCU58_18980 PF13188 PAS domain KCU58_18980 PF00072 Response regulator receiver domain KCU58_18990 PF00082 Subtilase family KCU58_18990 PF04151 Bacterial pre-peptidase C-terminal domain KCU58_18995 PF07690 Major Facilitator Superfamily KCU58_19000 PF03466 LysR substrate binding domain KCU58_19000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU58_19020 PF00268 Ribonucleotide reductase, small chain KCU58_19025 PF03477 ATP cone domain KCU58_19025 PF02867 Ribonucleotide reductase, barrel domain KCU58_19025 PF00317 Ribonucleotide reductase, all-alpha domain KCU58_19035 PF02566 OsmC-like protein KCU58_19040 PF01047 MarR family KCU58_19045 PF03969 AFG1-like ATPase KCU58_19060 PF02492 CobW/HypB/UreG, nucleotide-binding domain KCU58_19060 PF07683 Cobalamin synthesis protein cobW C-terminal domain KCU58_19070 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KCU58_19085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KCU58_19085 PF02770 Acyl-CoA dehydrogenase, middle domain KCU58_19085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KCU58_19090 PF01039 Carboxyl transferase domain KCU58_19095 PF00289 Biotin carboxylase, N-terminal domain KCU58_19095 PF00364 Biotin-requiring enzyme KCU58_19095 PF02785 Biotin carboxylase C-terminal domain KCU58_19095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KCU58_19115 PF13607 Succinyl-CoA ligase like flavodoxin domain KCU58_19115 PF00583 Acetyltransferase (GNAT) family KCU58_19115 PF13380 CoA binding domain KCU58_19120 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KCU58_19120 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KCU58_19125 PF00723 Glycosyl hydrolases family 15 KCU58_19130 PF00486 Transcriptional regulatory protein, C terminal KCU58_19130 PF00072 Response regulator receiver domain KCU58_19135 PF00512 His Kinase A (phospho-acceptor) domain KCU58_19135 PF00072 Response regulator receiver domain KCU58_19135 PF13188 PAS domain KCU58_19135 PF08448 PAS fold KCU58_19135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_19140 PF05658 Head domain of trimeric autotransporter adhesin KCU58_19140 PF03895 YadA-like membrane anchor domain KCU58_19140 PF13018 Extended Signal Peptide of Type V secretion system KCU58_19140 PF05662 Coiled stalk of trimeric autotransporter adhesin KCU58_19145 PF00082 Subtilase family KCU58_19145 PF04151 Bacterial pre-peptidase C-terminal domain KCU58_19155 PF05166 YcgL domain KCU58_19160 PF02801 Beta-ketoacyl synthase, C-terminal domain KCU58_19160 PF00109 Beta-ketoacyl synthase, N-terminal domain KCU58_19170 PF00535 Glycosyl transferase family 2 KCU58_19175 PF01494 FAD binding domain KCU58_19180 PF00106 short chain dehydrogenase KCU58_19205 PF07977 FabA-like domain KCU58_19220 PF00550 Phosphopantetheine attachment site KCU58_19225 PF04820 Tryptophan halogenase KCU58_19245 PF02322 Cytochrome bd terminal oxidase subunit II KCU58_19250 PF01654 Cytochrome bd terminal oxidase subunit I KCU58_19270 PF00296 Luciferase-like monooxygenase KCU58_19275 PF01218 Coproporphyrinogen III oxidase KCU58_19285 PF04239 Protein of unknown function (DUF421) KCU58_19290 PF01612 3'-5' exonuclease KCU58_19290 PF00476 DNA polymerase family A KCU58_19290 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KCU58_19290 PF01367 5'-3' exonuclease, C-terminal SAM fold KCU58_19305 PF00582 Universal stress protein family KCU58_19310 PF14602 Hexapeptide repeat of succinyl-transferase KCU58_19310 PF12464 Maltose acetyltransferase KCU58_19325 PF00580 UvrD/REP helicase N-terminal domain KCU58_19325 PF13361 UvrD-like helicase C-terminal domain KCU58_19335 PF13091 PLD-like domain KCU58_19335 PF13396 Phospholipase_D-nuclease N-terminal KCU58_19340 PF00471 Ribosomal protein L33 KCU58_19345 PF00830 Ribosomal L28 family KCU58_19375 PF00535 Glycosyl transferase family 2 KCU58_19380 PF01370 NAD dependent epimerase/dehydratase family KCU58_19385 PF17762 HTH domain found in ParB protein KCU58_19385 PF02195 ParB-like nuclease domain KCU58_19390 PF13614 AAA domain KCU58_19395 PF02527 rRNA small subunit methyltransferase G KCU58_19410 PF01648 4'-phosphopantetheinyl transferase superfamily KCU58_19415 PF04226 Transglycosylase associated protein KCU58_19430 PF00171 Aldehyde dehydrogenase family KCU58_19435 PF07690 Major Facilitator Superfamily KCU58_19445 PF00501 AMP-binding enzyme KCU58_19445 PF16177 Acetyl-coenzyme A synthetase N-terminus KCU58_19445 PF13193 AMP-binding enzyme C-terminal domain KCU58_19450 PF00196 Bacterial regulatory proteins, luxR family KCU58_19450 PF00072 Response regulator receiver domain KCU58_19455 PF02659 Putative manganese efflux pump KCU58_19460 PF00512 His Kinase A (phospho-acceptor) domain KCU58_19460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU58_19470 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain KCU58_19470 PF06165 Glycosyltransferase family 36 KCU58_19485 PF00982 Glycosyltransferase family 20 KCU58_19495 PF04357 TamB, inner membrane protein subunit of TAM complex KCU58_19500 PF01103 Surface antigen KCU58_19500 PF07244 Surface antigen variable number repeat KCU58_19500 PF17243 POTRA domain TamA domain 1 KCU58_19520 PF04337 Protein of unknown function, DUF480 KCU58_19555 PF17287 POTRA domain KCU58_19555 PF08479 POTRA domain, ShlB-type KCU58_19555 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB KCU58_19565 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KCU58_19570 PF04820 Tryptophan halogenase KCU58_19580 PF00356 Bacterial regulatory proteins, lacI family KCU58_19590 PF01553 Acyltransferase KCU58_19610 PF04616 Glycosyl hydrolases family 43 KCU58_19630 PF00331 Glycosyl hydrolase family 10 KCU58_19630 PF03422 Carbohydrate binding module (family 6) KCU58_19630 PF00553 Cellulose binding domain KCU58_19640 PF00331 Glycosyl hydrolase family 10 KCU58_19650 PF08450 SMP-30/Gluconolactonase/LRE-like region KCU58_19665 PF08125 Mannitol dehydrogenase C-terminal domain KCU58_19665 PF01232 Mannitol dehydrogenase Rossmann domain KCU58_19670 PF01915 Glycosyl hydrolase family 3 C-terminal domain KCU58_19670 PF07691 PA14 domain KCU58_19670 PF14310 Fibronectin type III-like domain KCU58_19670 PF00933 Glycosyl hydrolase family 3 N terminal domain KCU58_19675 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KCU58_19675 PF04616 Glycosyl hydrolases family 43 KCU58_19680 PF13378 Enolase C-terminal domain-like KCU58_19680 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KCU58_19690 PF07488 Glycosyl hydrolase family 67 middle domain KCU58_19690 PF07477 Glycosyl hydrolase family 67 C-terminus KCU58_19690 PF03648 Glycosyl hydrolase family 67 N-terminus KCU58_19695 PF00356 Bacterial regulatory proteins, lacI family KCU58_19705 PF01171 PP-loop family KCU58_19710 PF04381 Putative exonuclease, RdgC KCU58_19720 PF12697 Alpha/beta hydrolase family KCU58_19725 PF00762 Ferrochelatase KCU58_19735 PF02416 mttA/Hcf106 family KCU58_19740 PF02416 mttA/Hcf106 family KCU58_19745 PF00902 Sec-independent protein translocase protein (TatC) KCU58_19755 PF00117 Glutamine amidotransferase class-I KCU58_19755 PF00958 GMP synthase C terminal domain KCU58_19760 PF00437 Type II/IV secretion system protein KCU58_19760 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KCU58_19765 PF02091 Glycyl-tRNA synthetase alpha subunit KCU58_19775 PF05746 DALR anticodon binding domain KCU58_19775 PF02092 Glycyl-tRNA synthetase beta subunit KCU58_19780 PF13361 UvrD-like helicase C-terminal domain KCU58_19780 PF00580 UvrD/REP helicase N-terminal domain KCU58_19785 PF00265 Thymidine kinase KCU58_19795 PF04349 Periplasmic glucan biosynthesis protein, MdoG KCU58_19820 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KCU58_19820 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KCU58_19820 PF06827 Zinc finger found in FPG and IleRS KCU58_19835 PF00005 ABC transporter KCU58_19850 PF01926 50S ribosome-binding GTPase KCU58_19850 PF12631 MnmE helical domain KCU58_19850 PF10396 GTP-binding protein TrmE N-terminus KCU58_19855 PF02096 60Kd inner membrane protein KCU58_19855 PF14849 YidC periplasmic domain KCU58_19860 PF00825 Ribonuclease P KCU58_19865 PF00468 Ribosomal protein L34 KCU58_19885 PF11657 Transcriptional activator TraM KCU58_19890 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KCU58_19910 PF18821 Large polyvalent protein-associated domain 7 KCU58_19910 PF03432 Relaxase/Mobilisation nuclease domain KCU58_19915 PF02534 Type IV secretory system Conjugative DNA transfer KCU58_19920 PF10502 Signal peptidase, peptidase S26 KCU58_19925 PF01131 DNA topoisomerase KCU58_19925 PF01751 Toprim domain KCU58_19955 PF02796 Helix-turn-helix domain of resolvase KCU58_19955 PF00239 Resolvase, N terminal domain KCU58_20010 PF03743 Bacterial conjugation TrbI-like protein KCU58_20020 PF03524 Conjugal transfer protein KCU58_20030 PF03135 CagE, TrbE, VirB family, component of type IV transporter system KCU58_20035 PF05101 Type IV secretory pathway, VirB3-like protein KCU58_20040 PF04956 TrbC/VIRB2 family KCU58_20045 PF00437 Type II/IV secretion system protein KCU58_20050 PF00437 Type II/IV secretion system protein KCU58_20055 PF00437 Type II/IV secretion system protein KCU58_20060 PF16509 TrfB plasmid transcriptional repressor KCU58_20065 PF00436 Single-strand binding protein family KCU58_20070 PF07042 TrfA protein KCU58_20080 PF03230 Antirestriction protein KCU58_20100 PF17394 Uncharacterized KleE stable inheritance protein KCU58_20110 PF16509 TrfB plasmid transcriptional repressor KCU58_20115 PF13614 AAA domain KCU58_20120 PF08535 KorB domain KCU58_20120 PF06613 KorB C-terminal beta-barrel domain KCU58_20120 PF02195 ParB-like nuclease domain