locus-tag class description ISN35_00010 PF00708 Acylphosphatase ISN35_00015 PF08534 Redoxin ISN35_00020 PF03631 Virulence factor BrkB ISN35_00025 PF03358 NADPH-dependent FMN reductase ISN35_00040 PF04073 Aminoacyl-tRNA editing domain ISN35_00050 PF04151 Bacterial pre-peptidase C-terminal domain ISN35_00050 PF00082 Subtilase family ISN35_00055 PF01063 Amino-transferase class IV ISN35_00070 PF02233 NAD(P) transhydrogenase beta subunit ISN35_00075 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ISN35_00095 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ISN35_00095 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ISN35_00115 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISN35_00115 PF01612 3'-5' exonuclease ISN35_00115 PF00476 DNA polymerase family A ISN35_00115 PF01367 5'-3' exonuclease, C-terminal SAM fold ISN35_00120 PF00293 NUDIX domain ISN35_00135 PF00561 alpha/beta hydrolase fold ISN35_00160 PF00593 TonB dependent receptor ISN35_00160 PF07715 TonB-dependent Receptor Plug Domain ISN35_00175 PF00999 Sodium/hydrogen exchanger family ISN35_00175 PF02254 TrkA-N domain ISN35_00185 PF07715 TonB-dependent Receptor Plug Domain ISN35_00185 PF07660 Secretin and TonB N terminus short domain ISN35_00185 PF00593 TonB dependent receptor ISN35_00195 PF06276 Ferric iron reductase FhuF-like transporter ISN35_00195 PF04183 IucA / IucC family ISN35_00200 PF07690 Major Facilitator Superfamily ISN35_00205 PF04183 IucA / IucC family ISN35_00205 PF06276 Ferric iron reductase FhuF-like transporter ISN35_00210 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISN35_00210 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ISN35_00215 PF07769 psiF repeat ISN35_00220 PF01053 Cys/Met metabolism PLP-dependent enzyme ISN35_00235 PF10431 C-terminal, D2-small domain, of ClpB protein ISN35_00235 PF07724 AAA domain (Cdc48 subfamily) ISN35_00235 PF00004 ATPase family associated with various cellular activities (AAA) ISN35_00235 PF17871 AAA lid domain ISN35_00235 PF02861 Clp amino terminal domain, pathogenicity island component ISN35_00270 PF00593 TonB dependent receptor ISN35_00270 PF07715 TonB-dependent Receptor Plug Domain ISN35_00280 PF02358 Trehalose-phosphatase ISN35_00285 PF00723 Glycosyl hydrolases family 15 ISN35_00290 PF00982 Glycosyltransferase family 20 ISN35_00300 PF01011 PQQ enzyme repeat ISN35_00315 PF02578 Multi-copper polyphenol oxidoreductase laccase ISN35_00320 PF00849 RNA pseudouridylate synthase ISN35_00325 PF13525 Outer membrane lipoprotein ISN35_00335 PF00005 ABC transporter ISN35_00340 PF00528 Binding-protein-dependent transport system inner membrane component ISN35_00355 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ISN35_00360 PF12867 DinB superfamily ISN35_00360 PF03781 Sulfatase-modifying factor enzyme 1 ISN35_00370 PF00795 Carbon-nitrogen hydrolase ISN35_00370 PF02540 NAD synthase ISN35_00390 PF02629 CoA binding domain ISN35_00390 PF00549 CoA-ligase ISN35_00395 PF00549 CoA-ligase ISN35_00395 PF08442 ATP-grasp domain ISN35_00400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_00400 PF00512 His Kinase A (phospho-acceptor) domain ISN35_00405 PF00072 Response regulator receiver domain ISN35_00405 PF00158 Sigma-54 interaction domain ISN35_00405 PF02954 Bacterial regulatory protein, Fis family ISN35_00420 PF00437 Type II/IV secretion system protein ISN35_00420 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISN35_00425 PF00114 Pilin (bacterial filament) ISN35_00425 PF07963 Prokaryotic N-terminal methylation motif ISN35_00430 PF07963 Prokaryotic N-terminal methylation motif ISN35_00430 PF00114 Pilin (bacterial filament) ISN35_00435 PF00482 Type II secretion system (T2SS), protein F ISN35_00440 PF01478 Type IV leader peptidase family ISN35_00440 PF06750 Bacterial Peptidase A24 N-terminal domain ISN35_00445 PF01121 Dephospho-CoA kinase ISN35_00450 PF00989 PAS fold ISN35_00450 PF00512 His Kinase A (phospho-acceptor) domain ISN35_00450 PF11808 Phosphate regulon sensor protein PhoR ISN35_00450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_00455 PF00072 Response regulator receiver domain ISN35_00455 PF00486 Transcriptional regulatory protein, C terminal ISN35_00465 PF18030 RimK PreATP-grasp domain ISN35_00465 PF08443 RimK-like ATP-grasp domain ISN35_00470 PF07660 Secretin and TonB N terminus short domain ISN35_00470 PF00593 TonB dependent receptor ISN35_00470 PF07715 TonB-dependent Receptor Plug Domain ISN35_00475 PF04185 Phosphoesterase family ISN35_00475 PF05506 Domain of unknown function (DUF756) ISN35_00495 PF00266 Aminotransferase class-V ISN35_00500 PF01053 Cys/Met metabolism PLP-dependent enzyme ISN35_00510 PF07722 Peptidase C26 ISN35_00515 PF01810 LysE type translocator ISN35_00520 PF04204 Homoserine O-succinyltransferase ISN35_00525 PF00120 Glutamine synthetase, catalytic domain ISN35_00550 PF01026 TatD related DNase ISN35_00565 PF07693 KAP family P-loop domain ISN35_00585 PF04002 RadC-like JAB domain ISN35_00600 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ISN35_00605 PF00005 ABC transporter ISN35_00630 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ISN35_00660 PF02597 ThiS family ISN35_00660 PF05690 Thiazole biosynthesis protein ThiG ISN35_00665 PF05690 Thiazole biosynthesis protein ThiG ISN35_00670 PF02390 Putative methyltransferase ISN35_00675 PF02080 TrkA-C domain ISN35_00675 PF03600 Citrate transporter ISN35_00690 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISN35_00695 PF01741 Large-conductance mechanosensitive channel, MscL ISN35_00705 PF00356 Bacterial regulatory proteins, lacI family ISN35_00725 PF00588 SpoU rRNA Methylase family ISN35_00725 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISN35_00740 PF01235 Sodium:alanine symporter family ISN35_00760 PF02203 Tar ligand binding domain homologue ISN35_00760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_00760 PF00672 HAMP domain ISN35_00765 PF00009 Elongation factor Tu GTP binding domain ISN35_00770 PF01507 Phosphoadenosine phosphosulfate reductase family ISN35_00775 PF00175 Oxidoreductase NAD-binding domain ISN35_00775 PF00667 FAD binding domain ISN35_00775 PF00258 Flavodoxin ISN35_00780 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISN35_00780 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISN35_00785 PF01507 Phosphoadenosine phosphosulfate reductase family ISN35_00815 PF03960 ArsC family ISN35_00820 PF00512 His Kinase A (phospho-acceptor) domain ISN35_00820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_00820 PF00672 HAMP domain ISN35_00820 PF00072 Response regulator receiver domain ISN35_00820 PF01627 Hpt domain ISN35_00830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN35_00830 PF03466 LysR substrate binding domain ISN35_00835 PF10414 Sirohaem synthase dimerisation region ISN35_00835 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISN35_00835 PF14824 Sirohaem biosynthesis protein central ISN35_00840 PF00291 Pyridoxal-phosphate dependent enzyme ISN35_00850 PF00266 Aminotransferase class-V ISN35_00855 PF01546 Peptidase family M20/M25/M40 ISN35_00855 PF07687 Peptidase dimerisation domain ISN35_00875 PF01156 Inosine-uridine preferring nucleoside hydrolase ISN35_00890 PF01661 Macro domain ISN35_00895 PF00274 Fructose-bisphosphate aldolase class-I ISN35_00900 PF02887 Pyruvate kinase, alpha/beta domain ISN35_00900 PF00224 Pyruvate kinase, barrel domain ISN35_00905 PF13419 Haloacid dehalogenase-like hydrolase ISN35_00910 PF00162 Phosphoglycerate kinase ISN35_00925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_00925 PF00672 HAMP domain ISN35_00945 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISN35_00945 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISN35_00950 PF03922 OmpW family ISN35_00955 PF03922 OmpW family ISN35_00970 PF01022 Bacterial regulatory protein, arsR family ISN35_00975 PF00753 Metallo-beta-lactamase superfamily ISN35_00985 PF00528 Binding-protein-dependent transport system inner membrane component ISN35_00990 PF03459 TOBE domain ISN35_00990 PF00005 ABC transporter ISN35_01015 PF03734 L,D-transpeptidase catalytic domain ISN35_01015 PF01476 LysM domain ISN35_01020 PF01551 Peptidase family M23 ISN35_01020 PF04225 Opacity-associated protein A LysM-like domain ISN35_01045 PF00456 Transketolase, thiamine diphosphate binding domain ISN35_01045 PF02779 Transketolase, pyrimidine binding domain ISN35_01045 PF02780 Transketolase, C-terminal domain ISN35_01050 PF00375 Sodium:dicarboxylate symporter family ISN35_01065 PF13519 von Willebrand factor type A domain ISN35_01075 PF01882 Protein of unknown function DUF58 ISN35_01080 PF07726 ATPase family associated with various cellular activities (AAA) ISN35_01080 PF17863 AAA lid domain ISN35_01085 PF03958 Bacterial type II/III secretion system short domain ISN35_01085 PF00263 Bacterial type II and III secretion system protein ISN35_01085 PF07660 Secretin and TonB N terminus short domain ISN35_01085 PF11741 AMIN domain ISN35_01090 PF04351 Pilus assembly protein, PilP ISN35_01095 PF04350 Pilus assembly protein, PilO ISN35_01105 PF11104 Type IV pilus assembly protein PilM; ISN35_01110 PF17092 Penicillin-binding protein OB-like domain ISN35_01110 PF00912 Transglycosylase ISN35_01110 PF00905 Penicillin binding protein transpeptidase domain ISN35_01120 PF00557 Metallopeptidase family M24 ISN35_01125 PF00557 Metallopeptidase family M24 ISN35_01125 PF05195 Aminopeptidase P, N-terminal domain ISN35_01130 PF03695 Uncharacterised protein family (UPF0149) ISN35_01135 PF03707 Bacterial signalling protein N terminal repeat ISN35_01135 PF00990 Diguanylate cyclase, GGDEF domain ISN35_01135 PF00563 EAL domain ISN35_01145 PF05164 Cell division protein ZapA ISN35_01155 PF01812 5-formyltetrahydrofolate cyclo-ligase family ISN35_01165 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISN35_01175 PF13369 Transglutaminase-like superfamily ISN35_01185 PF00301 Rubredoxin ISN35_01190 PF02581 Thiamine monophosphate synthase ISN35_01200 PF00202 Aminotransferase class-III ISN35_01210 PF00072 Response regulator receiver domain ISN35_01210 PF00196 Bacterial regulatory proteins, luxR family ISN35_01215 PF00127 Copper binding proteins, plastocyanin/azurin family ISN35_01225 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ISN35_01225 PF00034 Cytochrome c ISN35_01235 PF00202 Aminotransferase class-III ISN35_01245 PF00480 ROK family ISN35_01260 PF01569 PAP2 superfamily ISN35_01270 PF02875 Mur ligase family, glutamate ligase domain ISN35_01270 PF01225 Mur ligase family, catalytic domain ISN35_01270 PF08245 Mur ligase middle domain ISN35_01280 PF00365 Phosphofructokinase ISN35_01290 PF03030 Inorganic H+ pyrophosphatase ISN35_01300 PF00719 Inorganic pyrophosphatase ISN35_01315 PF01964 Radical SAM ThiC family ISN35_01315 PF13667 ThiC-associated domain ISN35_01320 PF00672 HAMP domain ISN35_01320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_01325 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ISN35_01325 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ISN35_01330 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISN35_01330 PF00205 Thiamine pyrophosphate enzyme, central domain ISN35_01330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISN35_01340 PF00291 Pyridoxal-phosphate dependent enzyme ISN35_01345 PF00682 HMGL-like ISN35_01345 PF08502 LeuA allosteric (dimerisation) domain ISN35_01355 PF00330 Aconitase family (aconitate hydratase) ISN35_01365 PF00694 Aconitase C-terminal domain ISN35_01370 PF00180 Isocitrate/isopropylmalate dehydrogenase ISN35_01375 PF00990 Diguanylate cyclase, GGDEF domain ISN35_01390 PF02321 Outer membrane efflux protein ISN35_01395 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ISN35_01400 PF03279 Bacterial lipid A biosynthesis acyltransferase ISN35_01425 PF00664 ABC transporter transmembrane region ISN35_01425 PF00005 ABC transporter ISN35_01425 PF03412 Peptidase C39 family ISN35_01455 PF00529 HlyD membrane-fusion protein of T1SS ISN35_01470 PF00390 Malic enzyme, N-terminal domain ISN35_01470 PF01515 Phosphate acetyl/butaryl transferase ISN35_01470 PF03949 Malic enzyme, NAD binding domain ISN35_01475 PF00375 Sodium:dicarboxylate symporter family ISN35_01485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_01485 PF00512 His Kinase A (phospho-acceptor) domain ISN35_01495 PF00196 Bacterial regulatory proteins, luxR family ISN35_01495 PF00072 Response regulator receiver domain ISN35_01505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_01505 PF00512 His Kinase A (phospho-acceptor) domain ISN35_01505 PF08521 Two-component sensor kinase N-terminal ISN35_01510 PF00486 Transcriptional regulatory protein, C terminal ISN35_01510 PF00072 Response regulator receiver domain ISN35_01520 PF03600 Citrate transporter ISN35_01525 PF00106 short chain dehydrogenase ISN35_01530 PF00356 Bacterial regulatory proteins, lacI family ISN35_01545 PF00128 Alpha amylase, catalytic domain ISN35_01560 PF03193 RsgA GTPase ISN35_01565 PF00155 Aminotransferase class I and II ISN35_01585 PF01522 Polysaccharide deacetylase ISN35_01590 PF00462 Glutaredoxin ISN35_01610 PF01979 Amidohydrolase family ISN35_01615 PF01979 Amidohydrolase family ISN35_01615 PF00449 Urease alpha-subunit, N-terminal domain ISN35_01640 PF02567 Phenazine biosynthesis-like protein ISN35_01650 PF00756 Putative esterase ISN35_01655 PF04828 Glutathione-dependent formaldehyde-activating enzyme ISN35_01660 PF08240 Alcohol dehydrogenase GroES-like domain ISN35_01660 PF00107 Zinc-binding dehydrogenase ISN35_01665 PF02583 Metal-sensitive transcriptional repressor ISN35_01670 PF00072 Response regulator receiver domain ISN35_01670 PF00486 Transcriptional regulatory protein, C terminal ISN35_01675 PF16527 Two-component sensor protein CpxA, periplasmic domain ISN35_01675 PF00672 HAMP domain ISN35_01675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_01675 PF00512 His Kinase A (phospho-acceptor) domain ISN35_01690 PF04107 Glutamate-cysteine ligase family 2(GCS2) ISN35_01710 PF01926 50S ribosome-binding GTPase ISN35_01715 PF00034 Cytochrome c ISN35_01720 PF01323 DSBA-like thioredoxin domain ISN35_01725 PF01323 DSBA-like thioredoxin domain ISN35_01735 PF00593 TonB dependent receptor ISN35_01735 PF07715 TonB-dependent Receptor Plug Domain ISN35_01740 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ISN35_01740 PF01464 Transglycosylase SLT domain ISN35_01745 PF01743 Poly A polymerase head domain ISN35_01745 PF01966 HD domain ISN35_01745 PF12627 Probable RNA and SrmB- binding site of polymerase A ISN35_01750 PF01979 Amidohydrolase family ISN35_01755 PF01380 SIS domain ISN35_01760 PF00356 Bacterial regulatory proteins, lacI family ISN35_01765 PF07690 Major Facilitator Superfamily ISN35_01770 PF07702 UTRA domain ISN35_01770 PF00392 Bacterial regulatory proteins, gntR family ISN35_01785 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 ISN35_01785 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ISN35_01785 PF16355 Domain of unknown function (DUF4982) ISN35_01785 PF00703 Glycosyl hydrolases family 2 ISN35_01785 PF02837 Glycosyl hydrolases family 2, sugar binding domain ISN35_01815 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ISN35_01825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_01825 PF00512 His Kinase A (phospho-acceptor) domain ISN35_01830 PF00072 Response regulator receiver domain ISN35_01835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_01835 PF00512 His Kinase A (phospho-acceptor) domain ISN35_01835 PF00989 PAS fold ISN35_01845 PF04972 BON domain ISN35_01850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISN35_01850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISN35_01855 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ISN35_01855 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISN35_01865 PF01370 NAD dependent epimerase/dehydratase family ISN35_01865 PF08338 Domain of unknown function (DUF1731) ISN35_01880 PF00438 S-adenosylmethionine synthetase, N-terminal domain ISN35_01880 PF02772 S-adenosylmethionine synthetase, central domain ISN35_01880 PF02773 S-adenosylmethionine synthetase, C-terminal domain ISN35_01885 PF00328 Histidine phosphatase superfamily (branch 2) ISN35_01910 PF00311 Phosphoenolpyruvate carboxylase ISN35_01915 PF05221 S-adenosyl-L-homocysteine hydrolase ISN35_01915 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ISN35_01920 PF13649 Methyltransferase domain ISN35_01945 PF02219 Methylenetetrahydrofolate reductase ISN35_01955 PF00293 NUDIX domain ISN35_01965 PF01043 SecA preprotein cross-linking domain ISN35_01965 PF07517 SecA DEAD-like domain ISN35_01965 PF07516 SecA Wing and Scaffold domain ISN35_01965 PF02810 SEC-C motif ISN35_01970 PF01551 Peptidase family M23 ISN35_01970 PF08525 Opacity-associated protein A N-terminal motif ISN35_01970 PF01476 LysM domain ISN35_01980 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ISN35_01985 PF12327 FtsZ family, C-terminal domain ISN35_01985 PF00091 Tubulin/FtsZ family, GTPase domain ISN35_01990 PF02491 SHS2 domain inserted in FTSA ISN35_01995 PF08478 POTRA domain, FtsQ-type ISN35_01995 PF03799 Cell division protein FtsQ ISN35_02000 PF01820 D-ala D-ala ligase N-terminus ISN35_02000 PF07478 D-ala D-ala ligase C-terminus ISN35_02005 PF08245 Mur ligase middle domain ISN35_02005 PF02875 Mur ligase family, glutamate ligase domain ISN35_02005 PF01225 Mur ligase family, catalytic domain ISN35_02010 PF03033 Glycosyltransferase family 28 N-terminal domain ISN35_02010 PF04101 Glycosyltransferase family 28 C-terminal domain ISN35_02015 PF01098 Cell cycle protein ISN35_02020 PF00953 Glycosyl transferase family 4 ISN35_02025 PF08245 Mur ligase middle domain ISN35_02025 PF02875 Mur ligase family, glutamate ligase domain ISN35_02025 PF01225 Mur ligase family, catalytic domain ISN35_02030 PF01225 Mur ligase family, catalytic domain ISN35_02030 PF02875 Mur ligase family, glutamate ligase domain ISN35_02030 PF08245 Mur ligase middle domain ISN35_02035 PF00905 Penicillin binding protein transpeptidase domain ISN35_02035 PF03717 Penicillin-binding Protein dimerisation domain ISN35_02040 PF04999 Cell division protein FtsL ISN35_02045 PF01795 MraW methylase family ISN35_02050 PF02381 MraZ protein, putative antitoxin-like ISN35_02075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISN35_02085 PF02021 Uncharacterised protein family UPF0102 ISN35_02095 PF02913 FAD linked oxidases, C-terminal domain ISN35_02095 PF01565 FAD binding domain ISN35_02100 PF00072 Response regulator receiver domain ISN35_02100 PF00486 Transcriptional regulatory protein, C terminal ISN35_02105 PF02702 Osmosensitive K+ channel His kinase sensor domain ISN35_02105 PF00512 His Kinase A (phospho-acceptor) domain ISN35_02105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_02105 PF13492 GAF domain ISN35_02105 PF13493 Domain of unknown function (DUF4118) ISN35_02110 PF02669 K+-transporting ATPase, c chain ISN35_02120 PF03814 Potassium-transporting ATPase A subunit ISN35_02145 PF00586 AIR synthase related protein, N-terminal domain ISN35_02145 PF02769 AIR synthase related protein, C-terminal domain ISN35_02150 PF01029 NusB family ISN35_02155 PF00885 6,7-dimethyl-8-ribityllumazine synthase ISN35_02160 PF00925 GTP cyclohydrolase II ISN35_02160 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ISN35_02165 PF00677 Lumazine binding domain ISN35_02170 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISN35_02170 PF01872 RibD C-terminal domain ISN35_02180 PF03477 ATP cone domain ISN35_02190 PF00464 Serine hydroxymethyltransferase ISN35_02215 PF07690 Major Facilitator Superfamily ISN35_02220 PF00005 ABC transporter ISN35_02220 PF12848 ABC transporter ISN35_02225 PF01327 Polypeptide deformylase ISN35_02255 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISN35_02255 PF13632 Glycosyl transferase family group 2 ISN35_02265 PF02350 UDP-N-acetylglucosamine 2-epimerase ISN35_02275 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ISN35_02275 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ISN35_02310 PF07715 TonB-dependent Receptor Plug Domain ISN35_02310 PF00593 TonB dependent receptor ISN35_02320 PF00392 Bacterial regulatory proteins, gntR family ISN35_02320 PF07702 UTRA domain ISN35_02330 PF00263 Bacterial type II and III secretion system protein ISN35_02330 PF03958 Bacterial type II/III secretion system short domain ISN35_02340 PF10741 Type II secretion system (T2SS), protein M subtype b ISN35_02345 PF05137 Fimbrial assembly protein (PilN) ISN35_02350 PF03934 Type II secretion system (T2SS), protein K ISN35_02360 PF07963 Prokaryotic N-terminal methylation motif ISN35_02365 PF12019 Type II transport protein GspH ISN35_02370 PF08334 Type II secretion system (T2SS), protein G ISN35_02375 PF00482 Type II secretion system (T2SS), protein F ISN35_02380 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISN35_02380 PF00437 Type II/IV secretion system protein ISN35_02385 PF04151 Bacterial pre-peptidase C-terminal domain ISN35_02385 PF00082 Subtilase family ISN35_02390 PF03895 YadA-like membrane anchor domain ISN35_02390 PF05658 Head domain of trimeric autotransporter adhesin ISN35_02390 PF13018 Extended Signal Peptide of Type V secretion system ISN35_02390 PF05662 Coiled stalk of trimeric autotransporter adhesin ISN35_02400 PF00672 HAMP domain ISN35_02400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_02400 PF02203 Tar ligand binding domain homologue ISN35_02405 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ISN35_02405 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ISN35_02405 PF02769 AIR synthase related protein, C-terminal domain ISN35_02410 PF13098 Thioredoxin-like domain ISN35_02410 PF10411 Disulfide bond isomerase protein N-terminus ISN35_02415 PF02899 Phage integrase, N-terminal SAM-like domain ISN35_02415 PF00589 Phage integrase family ISN35_02440 PF00883 Cytosol aminopeptidase family, catalytic domain ISN35_02440 PF02789 Cytosol aminopeptidase family, N-terminal domain ISN35_02445 PF04364 DNA polymerase III chi subunit, HolC ISN35_02460 PF10458 Valyl tRNA synthetase tRNA binding arm ISN35_02460 PF00133 tRNA synthetases class I (I, L, M and V) ISN35_02460 PF08264 Anticodon-binding domain of tRNA ISN35_02480 PF01066 CDP-alcohol phosphatidyltransferase ISN35_02490 PF03129 Anticodon binding domain ISN35_02490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISN35_02490 PF04073 Aminoacyl-tRNA editing domain ISN35_02495 PF00816 H-NS histone family ISN35_02505 PF02405 Permease MlaE ISN35_02510 PF00005 ABC transporter ISN35_02515 PF02470 MlaD protein ISN35_02515 PF03886 ABC-type transport auxiliary lipoprotein component ISN35_02535 PF05045 Rhamnan synthesis protein F ISN35_02535 PF14307 Glycosyltransferase WbsX ISN35_02540 PF01144 Coenzyme A transferase ISN35_02545 PF01144 Coenzyme A transferase ISN35_02550 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISN35_02550 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISN35_02550 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISN35_02550 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISN35_02555 PF01050 Mannose-6-phosphate isomerase ISN35_02555 PF00483 Nucleotidyl transferase ISN35_02560 PF04321 RmlD substrate binding domain ISN35_02565 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ISN35_02570 PF00483 Nucleotidyl transferase ISN35_02575 PF16363 GDP-mannose 4,6 dehydratase ISN35_02580 PF01012 Electron transfer flavoprotein domain ISN35_02585 PF01012 Electron transfer flavoprotein domain ISN35_02585 PF00766 Electron transfer flavoprotein FAD-binding domain ISN35_02595 PF01040 UbiA prenyltransferase family ISN35_02600 PF04030 D-arabinono-1,4-lactone oxidase ISN35_02600 PF01565 FAD binding domain ISN35_02605 PF00106 short chain dehydrogenase ISN35_02610 PF01370 NAD dependent epimerase/dehydratase family ISN35_02630 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISN35_02630 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN35_02670 PF00535 Glycosyl transferase family 2 ISN35_02675 PF00535 Glycosyl transferase family 2 ISN35_02680 PF00398 Ribosomal RNA adenine dimethylase ISN35_02685 PF00005 ABC transporter ISN35_02695 PF01053 Cys/Met metabolism PLP-dependent enzyme ISN35_02700 PF00291 Pyridoxal-phosphate dependent enzyme ISN35_02700 PF00571 CBS domain ISN35_02725 PF00437 Type II/IV secretion system protein ISN35_02730 PF02798 Glutathione S-transferase, N-terminal domain ISN35_02730 PF14497 Glutathione S-transferase, C-terminal domain ISN35_02740 PF00271 Helicase conserved C-terminal domain ISN35_02740 PF00270 DEAD/DEAH box helicase ISN35_02745 PF01242 6-pyruvoyl tetrahydropterin synthase ISN35_02760 PF13185 GAF domain ISN35_02770 PF00593 TonB dependent receptor ISN35_02770 PF07715 TonB-dependent Receptor Plug Domain ISN35_02775 PF13419 Haloacid dehalogenase-like hydrolase ISN35_02780 PF00817 impB/mucB/samB family ISN35_02780 PF11798 IMS family HHH motif ISN35_02780 PF11799 impB/mucB/samB family C-terminal domain ISN35_02785 PF07977 FabA-like domain ISN35_02790 PF00109 Beta-ketoacyl synthase, N-terminal domain ISN35_02790 PF02801 Beta-ketoacyl synthase, C-terminal domain ISN35_02800 PF01432 Peptidase family M3 ISN35_02815 PF00403 Heavy-metal-associated domain ISN35_02820 PF00376 MerR family regulatory protein ISN35_02820 PF09278 MerR, DNA binding ISN35_02830 PF07732 Multicopper oxidase ISN35_02830 PF07731 Multicopper oxidase ISN35_02830 PF00394 Multicopper oxidase ISN35_02835 PF05275 Copper resistance protein B precursor (CopB) ISN35_02845 PF01380 SIS domain ISN35_02850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN35_02855 PF00005 ABC transporter ISN35_02860 PF00005 ABC transporter ISN35_02860 PF12704 MacB-like periplasmic core domain ISN35_02860 PF02687 FtsX-like permease family ISN35_02865 PF00005 ABC transporter ISN35_02865 PF12704 MacB-like periplasmic core domain ISN35_02865 PF02687 FtsX-like permease family ISN35_02870 PF12704 MacB-like periplasmic core domain ISN35_02870 PF02687 FtsX-like permease family ISN35_02870 PF00005 ABC transporter ISN35_02875 PF00005 ABC transporter ISN35_02875 PF02687 FtsX-like permease family ISN35_02875 PF12704 MacB-like periplasmic core domain ISN35_02885 PF02954 Bacterial regulatory protein, Fis family ISN35_02885 PF00072 Response regulator receiver domain ISN35_02885 PF00158 Sigma-54 interaction domain ISN35_02890 PF00989 PAS fold ISN35_02890 PF00512 His Kinase A (phospho-acceptor) domain ISN35_02890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_02900 PF12804 MobA-like NTP transferase domain ISN35_02900 PF00132 Bacterial transferase hexapeptide (six repeats) ISN35_02900 PF14602 Hexapeptide repeat of succinyl-transferase ISN35_02915 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ISN35_02915 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ISN35_02920 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISN35_02920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISN35_02925 PF00231 ATP synthase ISN35_02930 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISN35_02930 PF00306 ATP synthase alpha/beta chain, C terminal domain ISN35_02930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISN35_02935 PF00213 ATP synthase delta (OSCP) subunit ISN35_02940 PF00430 ATP synthase B/B' CF(0) ISN35_02945 PF00137 ATP synthase subunit C ISN35_02950 PF00119 ATP synthase A chain ISN35_02965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISN35_02965 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN35_02970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISN35_02970 PF00364 Biotin-requiring enzyme ISN35_02970 PF02817 e3 binding domain ISN35_02995 PF03180 NLPA lipoprotein ISN35_03000 PF00528 Binding-protein-dependent transport system inner membrane component ISN35_03005 PF09383 NIL domain ISN35_03005 PF00005 ABC transporter ISN35_03010 PF00892 EamA-like transporter family ISN35_03015 PF04461 Protein of unknown function (DUF520) ISN35_03025 PF01479 S4 domain ISN35_03025 PF00849 RNA pseudouridylate synthase ISN35_03030 PF08468 Methyltransferase small domain N-terminal ISN35_03030 PF05175 Methyltransferase small domain ISN35_03040 PF07995 Glucose / Sorbosone dehydrogenase ISN35_03050 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISN35_03050 PF00072 Response regulator receiver domain ISN35_03050 PF00989 PAS fold ISN35_03050 PF01627 Hpt domain ISN35_03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_03050 PF00512 His Kinase A (phospho-acceptor) domain ISN35_03070 PF00842 Alanine racemase, C-terminal domain ISN35_03070 PF01168 Alanine racemase, N-terminal domain ISN35_03075 PF01266 FAD dependent oxidoreductase ISN35_03080 PF01037 Lrp/AsnC ligand binding domain ISN35_03095 PF01641 SelR domain ISN35_03100 PF01618 MotA/TolQ/ExbB proton channel family ISN35_03105 PF00691 OmpA family ISN35_03105 PF13677 Membrane MotB of proton-channel complex MotA/MotB ISN35_03150 PF01061 ABC-2 type transporter ISN35_03155 PF00005 ABC transporter ISN35_03160 PF00999 Sodium/hydrogen exchanger family ISN35_03165 PF05711 Macrocin-O-methyltransferase (TylF) ISN35_03170 PF02469 Fasciclin domain ISN35_03175 PF03167 Uracil DNA glycosylase superfamily ISN35_03185 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISN35_03190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN35_03190 PF03466 LysR substrate binding domain ISN35_03195 PF03358 NADPH-dependent FMN reductase ISN35_03210 PF00248 Aldo/keto reductase family ISN35_03220 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISN35_03220 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISN35_03225 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ISN35_03245 PF17151 Periplasmic sensor domain ISN35_03245 PF00990 Diguanylate cyclase, GGDEF domain ISN35_03250 PF00355 Rieske [2Fe-2S] domain ISN35_03255 PF08448 PAS fold ISN35_03255 PF08447 PAS fold ISN35_03255 PF00563 EAL domain ISN35_03255 PF00990 Diguanylate cyclase, GGDEF domain ISN35_03275 PF08889 WbqC-like protein family ISN35_03280 PF00535 Glycosyl transferase family 2 ISN35_03285 PF13649 Methyltransferase domain ISN35_03295 PF00892 EamA-like transporter family ISN35_03305 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISN35_03315 PF00593 TonB dependent receptor ISN35_03315 PF07715 TonB-dependent Receptor Plug Domain ISN35_03325 PF04397 LytTr DNA-binding domain ISN35_03325 PF00072 Response regulator receiver domain ISN35_03330 PF07694 5TMR of 5TMR-LYT ISN35_03330 PF06580 Histidine kinase ISN35_03335 PF04199 Putative cyclase ISN35_03355 PF13520 Amino acid permease ISN35_03365 PF00553 Cellulose binding domain ISN35_03365 PF00150 Cellulase (glycosyl hydrolase family 5) ISN35_03375 PF01204 Trehalase ISN35_03380 PF01464 Transglycosylase SLT domain ISN35_03400 PF12833 Helix-turn-helix domain ISN35_03400 PF06719 AraC-type transcriptional regulator N-terminus ISN35_03410 PF01544 CorA-like Mg2+ transporter protein ISN35_03415 PF00324 Amino acid permease ISN35_03420 PF00892 EamA-like transporter family ISN35_03435 PF07759 Protein of unknown function (DUF1615) ISN35_03440 PF02449 Beta-galactosidase ISN35_03440 PF08533 Beta-galactosidase C-terminal domain ISN35_03440 PF08532 Beta-galactosidase trimerisation domain ISN35_03445 PF17189 Glycosyl hydrolase family 30 beta sandwich domain ISN35_03530 PF00145 C-5 cytosine-specific DNA methylase ISN35_03545 PF00456 Transketolase, thiamine diphosphate binding domain ISN35_03545 PF17831 Pyruvate dehydrogenase E1 component middle domain ISN35_03550 PF00672 HAMP domain ISN35_03550 PF02743 Cache domain ISN35_03550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_03565 PF04264 YceI-like domain ISN35_03570 PF00881 Nitroreductase family ISN35_03595 PF03009 Glycerophosphoryl diester phosphodiesterase family ISN35_03610 PF03710 Glutamate-ammonia ligase adenylyltransferase ISN35_03610 PF08335 GlnD PII-uridylyltransferase ISN35_03620 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ISN35_03620 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ISN35_03625 PF01541 GIY-YIG catalytic domain ISN35_03630 PF00793 DAHP synthetase I family ISN35_03635 PF00118 TCP-1/cpn60 chaperonin family ISN35_03640 PF00166 Chaperonin 10 Kd subunit ISN35_03650 PF03091 CutA1 divalent ion tolerance protein ISN35_03655 PF02683 Cytochrome C biogenesis protein transmembrane region ISN35_03655 PF11412 Disulphide bond corrector protein DsbC ISN35_03660 PF00578 AhpC/TSA family ISN35_03670 PF01220 Dehydroquinase class II ISN35_03675 PF00364 Biotin-requiring enzyme ISN35_03680 PF00289 Biotin carboxylase, N-terminal domain ISN35_03680 PF02785 Biotin carboxylase C-terminal domain ISN35_03680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISN35_03705 PF01381 Helix-turn-helix ISN35_03715 PF02954 Bacterial regulatory protein, Fis family ISN35_03745 PF12147 Putative methyltransferase ISN35_03745 PF12146 Serine aminopeptidase, S33 ISN35_03750 PF01066 CDP-alcohol phosphatidyltransferase ISN35_03755 PF02142 MGS-like domain ISN35_03755 PF01808 AICARFT/IMPCHase bienzyme ISN35_03760 PF02844 Phosphoribosylglycinamide synthetase, N domain ISN35_03760 PF02843 Phosphoribosylglycinamide synthetase, C domain ISN35_03760 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ISN35_03765 PF12805 FUSC-like inner membrane protein yccS ISN35_03770 PF07690 Major Facilitator Superfamily ISN35_03775 PF03466 LysR substrate binding domain ISN35_03775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN35_03810 PF00293 NUDIX domain ISN35_03810 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ISN35_03810 PF09297 NADH pyrophosphatase zinc ribbon domain ISN35_03815 PF01521 Iron-sulphur cluster biosynthesis ISN35_03835 PF00563 EAL domain ISN35_03835 PF00990 Diguanylate cyclase, GGDEF domain ISN35_03835 PF00072 Response regulator receiver domain ISN35_03840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISN35_03840 PF00672 HAMP domain ISN35_03840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_03840 PF00072 Response regulator receiver domain ISN35_03840 PF00512 His Kinase A (phospho-acceptor) domain ISN35_03840 PF01627 Hpt domain ISN35_03845 PF00210 Ferritin-like domain ISN35_03850 PF04324 BFD-like [2Fe-2S] binding domain ISN35_03855 PF00293 NUDIX domain ISN35_03870 PF00380 Ribosomal protein S9/S16 ISN35_03875 PF00572 Ribosomal protein L13 ISN35_03880 PF03232 Ubiquinone biosynthesis protein COQ7 ISN35_03890 PF00893 Small Multidrug Resistance protein ISN35_03895 PF02675 S-adenosylmethionine decarboxylase ISN35_03900 PF00027 Cyclic nucleotide-binding domain ISN35_03900 PF00325 Bacterial regulatory proteins, crp family ISN35_03905 PF01925 Sulfite exporter TauE/SafE ISN35_03920 PF00218 Indole-3-glycerol phosphate synthase ISN35_03925 PF02885 Glycosyl transferase family, helical bundle domain ISN35_03925 PF00591 Glycosyl transferase family, a/b domain ISN35_03930 PF00117 Glutamine amidotransferase class-I ISN35_03935 PF01212 Beta-eliminating lyase ISN35_03940 PF04715 Anthranilate synthase component I, N terminal region ISN35_03940 PF00425 chorismate binding enzyme ISN35_03945 PF00781 Diacylglycerol kinase catalytic domain ISN35_03950 PF00583 Acetyltransferase (GNAT) family ISN35_03955 PF00834 Ribulose-phosphate 3 epimerase family ISN35_03960 PF05099 Tellurite resistance protein TerB ISN35_03960 PF00226 DnaJ domain ISN35_03965 PF01259 SAICAR synthetase ISN35_03975 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ISN35_03980 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ISN35_03980 PF00361 Proton-conducting membrane transporter ISN35_03980 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ISN35_03980 PF13244 Domain of unknown function (DUF4040) ISN35_03985 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ISN35_03990 PF00361 Proton-conducting membrane transporter ISN35_03995 PF01899 Na+/H+ ion antiporter subunit ISN35_04000 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ISN35_04005 PF03334 Na+/H+ antiporter subunit ISN35_04010 PF01699 Sodium/calcium exchanger protein ISN35_04030 PF04209 homogentisate 1,2-dioxygenase ISN35_04035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISN35_04050 PF00854 POT family ISN35_04055 PF03301 Tryptophan 2,3-dioxygenase ISN35_04070 PF00676 Dehydrogenase E1 component ISN35_04075 PF02780 Transketolase, C-terminal domain ISN35_04075 PF02779 Transketolase, pyrimidine binding domain ISN35_04085 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISN35_04085 PF00364 Biotin-requiring enzyme ISN35_04085 PF02817 e3 binding domain ISN35_04115 PF00270 DEAD/DEAH box helicase ISN35_04115 PF00271 Helicase conserved C-terminal domain ISN35_04130 PF00294 pfkB family carbohydrate kinase ISN35_04135 PF00990 Diguanylate cyclase, GGDEF domain ISN35_04140 PF05661 Protein of unknown function (DUF808) ISN35_04145 PF02734 DAK2 domain ISN35_04145 PF02733 Dak1 domain ISN35_04165 PF00924 Mechanosensitive ion channel ISN35_04165 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISN35_04165 PF12795 Mechanosensitive ion channel porin domain ISN35_04170 PF08240 Alcohol dehydrogenase GroES-like domain ISN35_04170 PF00107 Zinc-binding dehydrogenase ISN35_04170 PF14765 Polyketide synthase dehydratase ISN35_04170 PF00698 Acyl transferase domain ISN35_04170 PF16197 Ketoacyl-synthetase C-terminal extension ISN35_04170 PF00109 Beta-ketoacyl synthase, N-terminal domain ISN35_04170 PF02801 Beta-ketoacyl synthase, C-terminal domain ISN35_04170 PF08659 KR domain ISN35_04170 PF00550 Phosphopantetheine attachment site ISN35_04175 PF00328 Histidine phosphatase superfamily (branch 2) ISN35_04190 PF12680 SnoaL-like domain ISN35_04190 PF04542 Sigma-70 region 2 ISN35_04190 PF08281 Sigma-70, region 4 ISN35_04195 PF05726 Pirin C-terminal cupin domain ISN35_04195 PF02678 Pirin ISN35_04205 PF07729 FCD domain ISN35_04205 PF00392 Bacterial regulatory proteins, gntR family ISN35_04220 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ISN35_04225 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG ISN35_04235 PF01039 Carboxyl transferase domain ISN35_04240 PF06857 Malonate decarboxylase delta subunit (MdcD) ISN35_04245 PF16957 Malonate decarboxylase, alpha subunit, transporter ISN35_04250 PF09339 IclR helix-turn-helix domain ISN35_04250 PF01614 Bacterial transcriptional regulator ISN35_04255 PF07690 Major Facilitator Superfamily ISN35_04260 PF05336 L-rhamnose mutarotase ISN35_04270 PF13378 Enolase C-terminal domain-like ISN35_04270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISN35_04275 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISN35_04290 PF00248 Aldo/keto reductase family ISN35_04295 PF13419 Haloacid dehalogenase-like hydrolase ISN35_04310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISN35_04310 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISN35_04315 PF00230 Major intrinsic protein ISN35_04320 PF01266 FAD dependent oxidoreductase ISN35_04320 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ISN35_04325 PF00455 DeoR C terminal sensor domain ISN35_04325 PF08220 DeoR-like helix-turn-helix domain ISN35_04330 PF07308 Protein of unknown function (DUF1456) ISN35_04350 PF07715 TonB-dependent Receptor Plug Domain ISN35_04350 PF00593 TonB dependent receptor ISN35_04355 PF00593 TonB dependent receptor ISN35_04355 PF07715 TonB-dependent Receptor Plug Domain ISN35_04355 PF07660 Secretin and TonB N terminus short domain ISN35_04370 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ISN35_04370 PF00326 Prolyl oligopeptidase family ISN35_04385 PF07715 TonB-dependent Receptor Plug Domain ISN35_04385 PF00593 TonB dependent receptor ISN35_04420 PF01555 DNA methylase ISN35_04440 PF00595 PDZ domain ISN35_04440 PF13180 PDZ domain ISN35_04460 PF01594 AI-2E family transporter ISN35_04465 PF13419 Haloacid dehalogenase-like hydrolase ISN35_04470 PF00883 Cytosol aminopeptidase family, catalytic domain ISN35_04470 PF02789 Cytosol aminopeptidase family, N-terminal domain ISN35_04475 PF00199 Catalase ISN35_04490 PF13333 Integrase core domain ISN35_04490 PF13276 HTH-like domain ISN35_04490 PF00665 Integrase core domain ISN35_04495 PF01527 Transposase ISN35_04505 PF12704 MacB-like periplasmic core domain ISN35_04505 PF02687 FtsX-like permease family ISN35_04520 PF00892 EamA-like transporter family ISN35_04525 PF00892 EamA-like transporter family ISN35_04535 PF00753 Metallo-beta-lactamase superfamily ISN35_04540 PF00579 tRNA synthetases class I (W and Y) ISN35_04575 PF03309 Type III pantothenate kinase ISN35_04580 PF02237 Biotin protein ligase C terminal domain ISN35_04580 PF03099 Biotin/lipoate A/B protein ligase family ISN35_04590 PF06167 Glucose-regulated metallo-peptidase M90 ISN35_04610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_04615 PF00486 Transcriptional regulatory protein, C terminal ISN35_04615 PF00072 Response regulator receiver domain ISN35_04625 PF01207 Dihydrouridine synthase (Dus) ISN35_04630 PF01717 Cobalamin-independent synthase, Catalytic domain ISN35_04630 PF08267 Cobalamin-independent synthase, N-terminal domain ISN35_04640 PF00551 Formyl transferase ISN35_04650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISN35_04650 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ISN35_04655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISN35_04660 PF02146 Sir2 family ISN35_04665 PF00486 Transcriptional regulatory protein, C terminal ISN35_04665 PF00072 Response regulator receiver domain ISN35_04670 PF00072 Response regulator receiver domain ISN35_04670 PF13188 PAS domain ISN35_04670 PF08448 PAS fold ISN35_04670 PF00512 His Kinase A (phospho-acceptor) domain ISN35_04670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_04680 PF04151 Bacterial pre-peptidase C-terminal domain ISN35_04680 PF00082 Subtilase family ISN35_04685 PF07690 Major Facilitator Superfamily ISN35_04690 PF03466 LysR substrate binding domain ISN35_04690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN35_04710 PF00268 Ribonucleotide reductase, small chain ISN35_04715 PF03477 ATP cone domain ISN35_04715 PF00317 Ribonucleotide reductase, all-alpha domain ISN35_04715 PF02867 Ribonucleotide reductase, barrel domain ISN35_04730 PF02566 OsmC-like protein ISN35_04735 PF01047 MarR family ISN35_04740 PF03969 AFG1-like ATPase ISN35_04760 PF07683 Cobalamin synthesis protein cobW C-terminal domain ISN35_04760 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISN35_04770 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ISN35_04780 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ISN35_04790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISN35_04790 PF02770 Acyl-CoA dehydrogenase, middle domain ISN35_04790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISN35_04795 PF01039 Carboxyl transferase domain ISN35_04800 PF00364 Biotin-requiring enzyme ISN35_04800 PF02785 Biotin carboxylase C-terminal domain ISN35_04800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISN35_04800 PF00289 Biotin carboxylase, N-terminal domain ISN35_04820 PF00583 Acetyltransferase (GNAT) family ISN35_04820 PF13607 Succinyl-CoA ligase like flavodoxin domain ISN35_04820 PF13380 CoA binding domain ISN35_04825 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ISN35_04825 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ISN35_04830 PF00723 Glycosyl hydrolases family 15 ISN35_04835 PF00486 Transcriptional regulatory protein, C terminal ISN35_04835 PF00072 Response regulator receiver domain ISN35_04840 PF00512 His Kinase A (phospho-acceptor) domain ISN35_04840 PF00072 Response regulator receiver domain ISN35_04840 PF13188 PAS domain ISN35_04840 PF08448 PAS fold ISN35_04840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_04845 PF13018 Extended Signal Peptide of Type V secretion system ISN35_04845 PF03895 YadA-like membrane anchor domain ISN35_04845 PF05658 Head domain of trimeric autotransporter adhesin ISN35_04845 PF05662 Coiled stalk of trimeric autotransporter adhesin ISN35_04850 PF00082 Subtilase family ISN35_04850 PF04151 Bacterial pre-peptidase C-terminal domain ISN35_04860 PF05166 YcgL domain ISN35_04865 PF00109 Beta-ketoacyl synthase, N-terminal domain ISN35_04865 PF02801 Beta-ketoacyl synthase, C-terminal domain ISN35_04875 PF00535 Glycosyl transferase family 2 ISN35_04880 PF01494 FAD binding domain ISN35_04885 PF00106 short chain dehydrogenase ISN35_04910 PF07977 FabA-like domain ISN35_04925 PF00550 Phosphopantetheine attachment site ISN35_04930 PF04820 Tryptophan halogenase ISN35_04950 PF02322 Cytochrome bd terminal oxidase subunit II ISN35_04955 PF01654 Cytochrome bd terminal oxidase subunit I ISN35_04970 PF00296 Luciferase-like monooxygenase ISN35_04975 PF01218 Coproporphyrinogen III oxidase ISN35_04985 PF04239 Protein of unknown function (DUF421) ISN35_04990 PF01367 5'-3' exonuclease, C-terminal SAM fold ISN35_04990 PF01612 3'-5' exonuclease ISN35_04990 PF00476 DNA polymerase family A ISN35_04990 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISN35_05005 PF00582 Universal stress protein family ISN35_05010 PF12464 Maltose acetyltransferase ISN35_05010 PF14602 Hexapeptide repeat of succinyl-transferase ISN35_05025 PF13361 UvrD-like helicase C-terminal domain ISN35_05025 PF00580 UvrD/REP helicase N-terminal domain ISN35_05035 PF13396 Phospholipase_D-nuclease N-terminal ISN35_05035 PF13091 PLD-like domain ISN35_05040 PF00471 Ribosomal protein L33 ISN35_05045 PF00830 Ribosomal L28 family ISN35_05055 PF00873 AcrB/AcrD/AcrF family ISN35_05075 PF00535 Glycosyl transferase family 2 ISN35_05080 PF01370 NAD dependent epimerase/dehydratase family ISN35_05085 PF17762 HTH domain found in ParB protein ISN35_05085 PF02195 ParB-like nuclease domain ISN35_05090 PF13614 AAA domain ISN35_05095 PF02527 rRNA small subunit methyltransferase G ISN35_05110 PF01648 4'-phosphopantetheinyl transferase superfamily ISN35_05115 PF04226 Transglycosylase associated protein ISN35_05130 PF00171 Aldehyde dehydrogenase family ISN35_05135 PF07690 Major Facilitator Superfamily ISN35_05145 PF00501 AMP-binding enzyme ISN35_05145 PF16177 Acetyl-coenzyme A synthetase N-terminus ISN35_05145 PF13193 AMP-binding enzyme C-terminal domain ISN35_05150 PF00196 Bacterial regulatory proteins, luxR family ISN35_05150 PF00072 Response regulator receiver domain ISN35_05155 PF02659 Putative manganese efflux pump ISN35_05160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_05160 PF00512 His Kinase A (phospho-acceptor) domain ISN35_05170 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ISN35_05170 PF06165 Glycosyltransferase family 36 ISN35_05185 PF00982 Glycosyltransferase family 20 ISN35_05195 PF04357 TamB, inner membrane protein subunit of TAM complex ISN35_05200 PF07244 Surface antigen variable number repeat ISN35_05200 PF17243 POTRA domain TamA domain 1 ISN35_05200 PF01103 Surface antigen ISN35_05220 PF04337 Protein of unknown function, DUF480 ISN35_05260 PF04829 Pre-toxin domain with VENN motif ISN35_05260 PF05860 haemagglutination activity domain ISN35_05260 PF04829 Pre-toxin domain with VENN motif ISN35_05260 PF05860 haemagglutination activity domain ISN35_05260 PF15605 Bacterial toxin 28 ISN35_05260 PF13332 Hemagglutinin repeat ISN35_05260 PF13332 Hemagglutinin repeat ISN35_05260 PF04829 Pre-toxin domain with VENN motif ISN35_05260 PF15605 Bacterial toxin 28 ISN35_05260 PF15605 Bacterial toxin 28 ISN35_05260 PF13332 Hemagglutinin repeat ISN35_05260 PF05860 haemagglutination activity domain ISN35_05265 PF08479 POTRA domain, ShlB-type ISN35_05265 PF17287 POTRA domain ISN35_05265 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISN35_05275 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ISN35_05280 PF04820 Tryptophan halogenase ISN35_05290 PF00356 Bacterial regulatory proteins, lacI family ISN35_05300 PF01553 Acyltransferase ISN35_05320 PF04616 Glycosyl hydrolases family 43 ISN35_05340 PF00331 Glycosyl hydrolase family 10 ISN35_05340 PF03422 Carbohydrate binding module (family 6) ISN35_05340 PF00553 Cellulose binding domain ISN35_05350 PF00331 Glycosyl hydrolase family 10 ISN35_05360 PF08450 SMP-30/Gluconolactonase/LRE-like region ISN35_05375 PF01232 Mannitol dehydrogenase Rossmann domain ISN35_05375 PF08125 Mannitol dehydrogenase C-terminal domain ISN35_05380 PF14310 Fibronectin type III-like domain ISN35_05380 PF07691 PA14 domain ISN35_05380 PF00933 Glycosyl hydrolase family 3 N terminal domain ISN35_05380 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISN35_05385 PF04616 Glycosyl hydrolases family 43 ISN35_05385 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ISN35_05390 PF13378 Enolase C-terminal domain-like ISN35_05390 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISN35_05400 PF03648 Glycosyl hydrolase family 67 N-terminus ISN35_05400 PF07488 Glycosyl hydrolase family 67 middle domain ISN35_05400 PF07477 Glycosyl hydrolase family 67 C-terminus ISN35_05405 PF00356 Bacterial regulatory proteins, lacI family ISN35_05415 PF01171 PP-loop family ISN35_05420 PF04381 Putative exonuclease, RdgC ISN35_05430 PF12697 Alpha/beta hydrolase family ISN35_05435 PF00762 Ferrochelatase ISN35_05445 PF02416 mttA/Hcf106 family ISN35_05450 PF02416 mttA/Hcf106 family ISN35_05455 PF00902 Sec-independent protein translocase protein (TatC) ISN35_05465 PF00117 Glutamine amidotransferase class-I ISN35_05465 PF00958 GMP synthase C terminal domain ISN35_05470 PF00437 Type II/IV secretion system protein ISN35_05470 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISN35_05475 PF02091 Glycyl-tRNA synthetase alpha subunit ISN35_05485 PF05746 DALR anticodon binding domain ISN35_05485 PF02092 Glycyl-tRNA synthetase beta subunit ISN35_05490 PF00580 UvrD/REP helicase N-terminal domain ISN35_05490 PF13361 UvrD-like helicase C-terminal domain ISN35_05495 PF00265 Thymidine kinase ISN35_05505 PF04349 Periplasmic glucan biosynthesis protein, MdoG ISN35_05530 PF06827 Zinc finger found in FPG and IleRS ISN35_05530 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ISN35_05530 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ISN35_05545 PF00005 ABC transporter ISN35_05555 PF10396 GTP-binding protein TrmE N-terminus ISN35_05555 PF12631 MnmE helical domain ISN35_05555 PF01926 50S ribosome-binding GTPase ISN35_05560 PF02096 60Kd inner membrane protein ISN35_05560 PF14849 YidC periplasmic domain ISN35_05565 PF00825 Ribonuclease P ISN35_05570 PF00468 Ribosomal protein L34 ISN35_05575 PF08299 Bacterial dnaA protein helix-turn-helix ISN35_05575 PF00308 Bacterial dnaA protein ISN35_05575 PF11638 DnaA N-terminal domain ISN35_05580 PF02768 DNA polymerase III beta subunit, C-terminal domain ISN35_05580 PF02767 DNA polymerase III beta subunit, central domain ISN35_05580 PF00712 DNA polymerase III beta subunit, N-terminal domain ISN35_05585 PF02463 RecF/RecN/SMC N terminal domain ISN35_05590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_05590 PF00204 DNA gyrase B ISN35_05590 PF00986 DNA gyrase B subunit, carboxyl terminus ISN35_05590 PF18053 DNA gyrase B subunit insert domain ISN35_05590 PF01751 Toprim domain ISN35_05595 PF02517 CPBP intramembrane metalloprotease ISN35_05600 PF01435 Peptidase family M48 ISN35_05610 PF03544 Gram-negative bacterial TonB protein C-terminal ISN35_05615 PF01618 MotA/TolQ/ExbB proton channel family ISN35_05620 PF02472 Biopolymer transport protein ExbD/TolR ISN35_05625 PF02472 Biopolymer transport protein ExbD/TolR ISN35_05630 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ISN35_05640 PF13091 PLD-like domain ISN35_05640 PF13396 Phospholipase_D-nuclease N-terminal ISN35_05645 PF04055 Radical SAM superfamily ISN35_05655 PF01810 LysE type translocator ISN35_05660 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ISN35_05665 PF00155 Aminotransferase class I and II ISN35_05670 PF00593 TonB dependent receptor ISN35_05670 PF07715 TonB-dependent Receptor Plug Domain ISN35_05680 PF02954 Bacterial regulatory protein, Fis family ISN35_05680 PF00158 Sigma-54 interaction domain ISN35_05680 PF01590 GAF domain ISN35_05685 PF00171 Aldehyde dehydrogenase family ISN35_05690 PF00107 Zinc-binding dehydrogenase ISN35_05690 PF08240 Alcohol dehydrogenase GroES-like domain ISN35_05710 PF02735 Ku70/Ku80 beta-barrel domain ISN35_05715 PF01068 ATP dependent DNA ligase domain ISN35_05715 PF13298 DNA polymerase Ligase (LigD) ISN35_05715 PF04679 ATP dependent DNA ligase C terminal region ISN35_05720 PF01070 FMN-dependent dehydrogenase ISN35_05745 PF12241 Trans-2-enoyl-CoA reductase catalytic region ISN35_05745 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ISN35_05745 PF07055 Enoyl reductase FAD binding domain ISN35_05755 PF00294 pfkB family carbohydrate kinase ISN35_05805 PF01804 Penicillin amidase ISN35_05830 PF02677 Epoxyqueuosine reductase QueH ISN35_05850 PF00593 TonB dependent receptor ISN35_05850 PF07715 TonB-dependent Receptor Plug Domain ISN35_05880 PF00135 Carboxylesterase family ISN35_05885 PF07859 alpha/beta hydrolase fold ISN35_05885 PF00331 Glycosyl hydrolase family 10 ISN35_05895 PF03480 Bacterial extracellular solute-binding protein, family 7 ISN35_05905 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ISN35_05910 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ISN35_05910 PF04616 Glycosyl hydrolases family 43 ISN35_05915 PF00356 Bacterial regulatory proteins, lacI family ISN35_05920 PF04962 KduI/IolB family ISN35_05940 PF00351 Biopterin-dependent aromatic amino acid hydroxylase ISN35_05945 PF01037 Lrp/AsnC ligand binding domain ISN35_05960 PF01734 Patatin-like phospholipase ISN35_05975 PF01569 PAP2 superfamily ISN35_05980 PF01569 PAP2 superfamily ISN35_05990 PF03741 Integral membrane protein TerC family ISN35_05995 PF17785 PUA-like domain ISN35_05995 PF10672 S-adenosylmethionine-dependent methyltransferase ISN35_06020 PF04820 Tryptophan halogenase ISN35_06030 PF02595 Glycerate kinase family ISN35_06035 PF10947 Protein of unknown function (DUF2628) ISN35_06040 PF13520 Amino acid permease ISN35_06045 PF00072 Response regulator receiver domain ISN35_06045 PF00196 Bacterial regulatory proteins, luxR family ISN35_06050 PF13426 PAS domain ISN35_06050 PF08447 PAS fold ISN35_06050 PF00989 PAS fold ISN35_06050 PF00512 His Kinase A (phospho-acceptor) domain ISN35_06050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_06050 PF13493 Domain of unknown function (DUF4118) ISN35_06055 PF02308 MgtC family ISN35_06070 PF02646 RmuC family ISN35_06075 PF00255 Glutathione peroxidase ISN35_06080 PF04333 MlaA lipoprotein ISN35_06095 PF02470 MlaD protein ISN35_06100 PF02405 Permease MlaE ISN35_06105 PF00005 ABC transporter ISN35_06110 PF17946 RecC C-terminal domain ISN35_06115 PF13361 UvrD-like helicase C-terminal domain ISN35_06115 PF00580 UvrD/REP helicase N-terminal domain ISN35_06115 PF12705 PD-(D/E)XK nuclease superfamily ISN35_06120 PF13538 UvrD-like helicase C-terminal domain ISN35_06140 PF01230 HIT domain ISN35_06145 PF05016 ParE toxin of type II toxin-antitoxin system, parDE ISN35_06150 PF09386 Antitoxin ParD ISN35_06180 PF08845 Toxin SymE, type I toxin-antitoxin system ISN35_06215 PF00083 Sugar (and other) transporter ISN35_06220 PF01227 GTP cyclohydrolase I ISN35_06245 PF01925 Sulfite exporter TauE/SafE ISN35_06250 PF02810 SEC-C motif ISN35_06260 PF13406 Transglycosylase SLT domain ISN35_06265 PF07690 Major Facilitator Superfamily ISN35_06270 PF01126 Heme oxygenase ISN35_06275 PF00360 Phytochrome region ISN35_06275 PF13426 PAS domain ISN35_06275 PF08446 PAS fold ISN35_06275 PF01590 GAF domain ISN35_06315 PF02142 MGS-like domain ISN35_06320 PF00150 Cellulase (glycosyl hydrolase family 5) ISN35_06325 PF00150 Cellulase (glycosyl hydrolase family 5) ISN35_06330 PF00150 Cellulase (glycosyl hydrolase family 5) ISN35_06335 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN35_06335 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISN35_06340 PF00310 Glutamine amidotransferases class-II ISN35_06340 PF04898 Glutamate synthase central domain ISN35_06340 PF01493 GXGXG motif ISN35_06340 PF01645 Conserved region in glutamate synthase ISN35_06385 PF09369 Domain of unknown function (DUF1998) ISN35_06385 PF00270 DEAD/DEAH box helicase ISN35_06385 PF00271 Helicase conserved C-terminal domain ISN35_06390 PF01381 Helix-turn-helix ISN35_06420 PF00083 Sugar (and other) transporter ISN35_06465 PF13614 AAA domain ISN35_06480 PF13091 PLD-like domain ISN35_06485 PF03061 Thioesterase superfamily ISN35_06495 PF12146 Serine aminopeptidase, S33 ISN35_06510 PF01161 Phosphatidylethanolamine-binding protein ISN35_06515 PF02673 Bacitracin resistance protein BacA ISN35_06520 PF00120 Glutamine synthetase, catalytic domain ISN35_06520 PF03951 Glutamine synthetase, beta-Grasp domain ISN35_06525 PF00543 Nitrogen regulatory protein P-II ISN35_06530 PF00909 Ammonium Transporter Family ISN35_06535 PF00512 His Kinase A (phospho-acceptor) domain ISN35_06535 PF00989 PAS fold ISN35_06535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_06540 PF00072 Response regulator receiver domain ISN35_06540 PF00158 Sigma-54 interaction domain ISN35_06540 PF02954 Bacterial regulatory protein, Fis family ISN35_06545 PF00080 Copper/zinc superoxide dismutase (SODC) ISN35_06550 PF00080 Copper/zinc superoxide dismutase (SODC) ISN35_06560 PF00108 Thiolase, N-terminal domain ISN35_06560 PF02803 Thiolase, C-terminal domain ISN35_06600 PF02556 Preprotein translocase subunit SecB ISN35_06605 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ISN35_06605 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ISN35_06615 PF00588 SpoU rRNA Methylase family ISN35_06625 PF00675 Insulinase (Peptidase family M16) ISN35_06625 PF05193 Peptidase M16 inactive domain ISN35_06635 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISN35_06635 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISN35_06640 PF13784 Fic/DOC family N-terminal ISN35_06640 PF02661 Fic/DOC family ISN35_06645 PF00561 alpha/beta hydrolase fold ISN35_06655 PF03692 Putative zinc- or iron-chelating domain ISN35_06660 PF00501 AMP-binding enzyme ISN35_06670 PF00144 Beta-lactamase ISN35_06675 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ISN35_06685 PF07478 D-ala D-ala ligase C-terminus ISN35_06685 PF01820 D-ala D-ala ligase N-terminus ISN35_06695 PF03109 ABC1 family ISN35_06700 PF02683 Cytochrome C biogenesis protein transmembrane region ISN35_06700 PF11412 Disulphide bond corrector protein DsbC ISN35_06705 PF00849 RNA pseudouridylate synthase ISN35_06715 PF00472 RF-1 domain ISN35_06725 PF01432 Peptidase family M3 ISN35_06745 PF03466 LysR substrate binding domain ISN35_06745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN35_06750 PF01274 Malate synthase ISN35_06755 PF00463 Isocitrate lyase family ISN35_06760 PF00990 Diguanylate cyclase, GGDEF domain ISN35_06790 PF00916 Sulfate permease family ISN35_06790 PF01740 STAS domain ISN35_06825 PF12146 Serine aminopeptidase, S33 ISN35_06830 PF00107 Zinc-binding dehydrogenase ISN35_06830 PF16884 N-terminal domain of oxidoreductase ISN35_06835 PF00248 Aldo/keto reductase family ISN35_06845 PF00849 RNA pseudouridylate synthase ISN35_06865 PF01026 TatD related DNase ISN35_06880 PF01061 ABC-2 type transporter ISN35_06885 PF00005 ABC transporter ISN35_06890 PF00970 Oxidoreductase FAD-binding domain ISN35_06890 PF00175 Oxidoreductase NAD-binding domain ISN35_06890 PF00111 2Fe-2S iron-sulfur cluster binding domain ISN35_06900 PF01381 Helix-turn-helix ISN35_06905 PF00561 alpha/beta hydrolase fold ISN35_06910 PF00005 ABC transporter ISN35_06925 PF03350 Uncharacterized protein family, UPF0114 ISN35_06930 PF02798 Glutathione S-transferase, N-terminal domain ISN35_06930 PF00043 Glutathione S-transferase, C-terminal domain ISN35_06935 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ISN35_06935 PF00326 Prolyl oligopeptidase family ISN35_06965 PF00490 Delta-aminolevulinic acid dehydratase ISN35_06985 PF00175 Oxidoreductase NAD-binding domain ISN35_06985 PF00667 FAD binding domain ISN35_06985 PF00258 Flavodoxin ISN35_06990 PF04052 TolB amino-terminal domain ISN35_06990 PF07676 WD40-like Beta Propeller Repeat ISN35_06995 PF08501 Shikimate dehydrogenase substrate binding domain ISN35_06995 PF01488 Shikimate / quinate 5-dehydrogenase ISN35_06995 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ISN35_07005 PF06733 DEAD_2 ISN35_07005 PF13307 Helicase C-terminal domain ISN35_07015 PF00199 Catalase ISN35_07015 PF06628 Catalase-related immune-responsive ISN35_07030 PF00326 Prolyl oligopeptidase family ISN35_07035 PF04993 TfoX N-terminal domain ISN35_07065 PF00202 Aminotransferase class-III ISN35_07090 PF01594 AI-2E family transporter ISN35_07100 PF07995 Glucose / Sorbosone dehydrogenase ISN35_07140 PF00589 Phage integrase family ISN35_07140 PF13495 Phage integrase, N-terminal SAM-like domain ISN35_07145 PF00920 Dehydratase family ISN35_07155 PF03738 Glutathionylspermidine synthase preATP-grasp ISN35_07165 PF17863 AAA lid domain ISN35_07165 PF07726 ATPase family associated with various cellular activities (AAA) ISN35_07200 PF07690 Major Facilitator Superfamily ISN35_07210 PF00132 Bacterial transferase hexapeptide (six repeats) ISN35_07225 PF00529 HlyD membrane-fusion protein of T1SS ISN35_07225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN35_07230 PF00873 AcrB/AcrD/AcrF family ISN35_07235 PF02321 Outer membrane efflux protein ISN35_07240 PF00563 EAL domain ISN35_07240 PF00990 Diguanylate cyclase, GGDEF domain ISN35_07240 PF03707 Bacterial signalling protein N terminal repeat ISN35_07245 PF01134 Glucose inhibited division protein A ISN35_07245 PF13932 GidA associated domain ISN35_07255 PF00291 Pyridoxal-phosphate dependent enzyme ISN35_07270 PF13649 Methyltransferase domain ISN35_07280 PF12697 Alpha/beta hydrolase family ISN35_07285 PF00155 Aminotransferase class I and II ISN35_07290 PF04055 Radical SAM superfamily ISN35_07290 PF06968 Biotin and Thiamin Synthesis associated domain ISN35_07300 PF02355 Protein export membrane protein ISN35_07300 PF07549 SecD/SecF GG Motif ISN35_07305 PF01040 UbiA prenyltransferase family ISN35_07330 PF13335 Magnesium chelatase, subunit ChlI C-terminal ISN35_07330 PF01078 Magnesium chelatase, subunit ChlI ISN35_07335 PF04380 Membrane fusogenic activity ISN35_07345 PF00543 Nitrogen regulatory protein P-II ISN35_07360 PF17284 Spermidine synthase tetramerisation domain ISN35_07365 PF17810 Arginine decarboxylase helical bundle domain ISN35_07365 PF17944 Arginine decarboxylase C-terminal helical extension ISN35_07365 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISN35_07370 PF00975 Thioesterase domain ISN35_07370 PF00501 AMP-binding enzyme ISN35_07370 PF00550 Phosphopantetheine attachment site ISN35_07370 PF13193 AMP-binding enzyme C-terminal domain ISN35_07370 PF00668 Condensation domain ISN35_07380 PF01757 Acyltransferase family ISN35_07385 PF03466 LysR substrate binding domain ISN35_07385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN35_07405 PF00106 short chain dehydrogenase ISN35_07415 PF05746 DALR anticodon binding domain ISN35_07415 PF00750 tRNA synthetases class I (R) ISN35_07415 PF03485 Arginyl tRNA synthetase N terminal domain ISN35_07420 PF04002 RadC-like JAB domain ISN35_07425 PF02441 Flavoprotein ISN35_07425 PF04127 DNA / pantothenate metabolism flavoprotein ISN35_07430 PF00692 dUTPase ISN35_07435 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISN35_07435 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISN35_07435 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISN35_07435 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISN35_07445 PF00156 Phosphoribosyl transferase domain ISN35_07455 PF07690 Major Facilitator Superfamily ISN35_07465 PF03702 Anhydro-N-acetylmuramic acid kinase ISN35_07470 PF04225 Opacity-associated protein A LysM-like domain ISN35_07470 PF01551 Peptidase family M23 ISN35_07475 PF00579 tRNA synthetases class I (W and Y) ISN35_07505 PF00107 Zinc-binding dehydrogenase ISN35_07505 PF08240 Alcohol dehydrogenase GroES-like domain ISN35_07510 PF04389 Peptidase family M28 ISN35_07520 PF01551 Peptidase family M23 ISN35_07525 PF13180 PDZ domain ISN35_07525 PF03572 Peptidase family S41 ISN35_07540 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ISN35_07555 PF13520 Amino acid permease ISN35_07570 PF01619 Proline dehydrogenase ISN35_07570 PF14850 DNA-binding domain of Proline dehydrogenase ISN35_07570 PF00171 Aldehyde dehydrogenase family ISN35_07570 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ISN35_07580 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ISN35_07580 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ISN35_07585 PF00115 Cytochrome C and Quinol oxidase polypeptide I ISN35_07590 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ISN35_07595 PF00510 Cytochrome c oxidase subunit III ISN35_07625 PF01040 UbiA prenyltransferase family ISN35_07635 PF13593 SBF-like CPA transporter family (DUF4137) ISN35_07640 PF10410 DnaB-helicase binding domain of primase ISN35_07640 PF08278 DNA primase DnaG DnaB-binding ISN35_07640 PF01807 CHC2 zinc finger ISN35_07640 PF08275 DNA primase catalytic core, N-terminal domain ISN35_07645 PF03631 Virulence factor BrkB ISN35_07655 PF01165 Ribosomal protein S21 ISN35_07665 PF02152 Dihydroneopterin aldolase ISN35_07670 PF14403 Circularly permuted ATP-grasp type 2 ISN35_07680 PF00933 Glycosyl hydrolase family 3 N terminal domain ISN35_07680 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISN35_07680 PF14310 Fibronectin type III-like domain ISN35_07685 PF07995 Glucose / Sorbosone dehydrogenase ISN35_07705 PF13520 Amino acid permease ISN35_07715 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISN35_07715 PF13378 Enolase C-terminal domain-like ISN35_07725 PF00593 TonB dependent receptor ISN35_07725 PF07715 TonB-dependent Receptor Plug Domain ISN35_07730 PF01510 N-acetylmuramoyl-L-alanine amidase ISN35_07780 PF07063 Domain of unknown function (DUF1338) ISN35_07790 PF00873 AcrB/AcrD/AcrF family ISN35_07795 PF00873 AcrB/AcrD/AcrF family ISN35_07800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN35_07810 PF14489 QueF-like protein ISN35_07810 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ISN35_07815 PF04972 BON domain ISN35_07815 PF01476 LysM domain ISN35_07825 PF09827 CRISPR associated protein Cas2 ISN35_07830 PF01867 CRISPR associated protein Cas1 ISN35_07850 PF09704 CRISPR-associated protein (Cas_Cas5) ISN35_07860 PF03971 Monomeric isocitrate dehydrogenase ISN35_07870 PF07715 TonB-dependent Receptor Plug Domain ISN35_07870 PF00593 TonB dependent receptor ISN35_07875 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ISN35_07885 PF07498 Rho termination factor, N-terminal domain ISN35_07885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISN35_07885 PF07497 Rho termination factor, RNA-binding domain ISN35_07890 PF00085 Thioredoxin ISN35_07895 PF12300 ATP-dependent RNA helicase RhlB ISN35_07895 PF00270 DEAD/DEAH box helicase ISN35_07895 PF00271 Helicase conserved C-terminal domain ISN35_07900 PF00005 ABC transporter ISN35_07905 PF18075 FtsX extracellular domain ISN35_07910 PF01339 CheB methylesterase ISN35_07910 PF00072 Response regulator receiver domain ISN35_07915 PF03167 Uracil DNA glycosylase superfamily ISN35_07920 PF04542 Sigma-70 region 2 ISN35_07920 PF04545 Sigma-70, region 4 ISN35_07920 PF00140 Sigma-70 factor, region 1.2 ISN35_07925 PF03458 UPF0126 domain ISN35_07930 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN35_07940 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ISN35_07940 PF00270 DEAD/DEAH box helicase ISN35_07940 PF00271 Helicase conserved C-terminal domain ISN35_07940 PF18074 Primosomal protein N C-terminal domain ISN35_07940 PF17764 3′ DNA-binding domain (3′BD) ISN35_07950 PF01554 MatE ISN35_07955 PF01343 Peptidase family S49 ISN35_07980 PF01300 Telomere recombination ISN35_07985 PF01131 DNA topoisomerase ISN35_07985 PF13368 Topoisomerase C-terminal repeat ISN35_07985 PF01751 Toprim domain ISN35_07990 PF06271 RDD family ISN35_08000 PF04361 Protein of unknown function (DUF494) ISN35_08005 PF02481 DNA recombination-mediator protein A ISN35_08005 PF17782 DprA winged helix domain ISN35_08010 PF01476 LysM domain ISN35_08015 PF01327 Polypeptide deformylase ISN35_08020 PF02911 Formyl transferase, C-terminal domain ISN35_08020 PF00551 Formyl transferase ISN35_08025 PF01029 NusB family ISN35_08025 PF01189 16S rRNA methyltransferase RsmB/F ISN35_08030 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ISN35_08045 PF00535 Glycosyl transferase family 2 ISN35_08065 PF00925 GTP cyclohydrolase II ISN35_08070 PF00583 Acetyltransferase (GNAT) family ISN35_08080 PF02580 D-Tyr-tRNA(Tyr) deacylase ISN35_08085 PF04539 Sigma-70 region 3 ISN35_08085 PF04542 Sigma-70 region 2 ISN35_08085 PF04546 Sigma-70, non-essential region ISN35_08085 PF03979 Sigma-70 factor, region 1.1 ISN35_08085 PF04545 Sigma-70, region 4 ISN35_08085 PF00140 Sigma-70 factor, region 1.2 ISN35_08090 PF03377 TAL effector repeat ISN35_08110 PF07690 Major Facilitator Superfamily ISN35_08115 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISN35_08115 PF00356 Bacterial regulatory proteins, lacI family ISN35_08125 PF11896 Domain of unknown function (DUF3416) ISN35_08125 PF00128 Alpha amylase, catalytic domain ISN35_08130 PF00128 Alpha amylase, catalytic domain ISN35_08130 PF16657 Maltogenic Amylase, C-terminal domain ISN35_08135 PF00128 Alpha amylase, catalytic domain ISN35_08135 PF02806 Alpha amylase, C-terminal all-beta domain ISN35_08135 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISN35_08155 PF03377 TAL effector repeat ISN35_08175 PF12706 Beta-lactamase superfamily domain ISN35_08180 PF00440 Bacterial regulatory proteins, tetR family ISN35_08180 PF08359 YsiA-like protein, C-terminal region ISN35_08185 PF01494 FAD binding domain ISN35_08220 PF02203 Tar ligand binding domain homologue ISN35_08220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_08220 PF00672 HAMP domain ISN35_08240 PF05067 Manganese containing catalase ISN35_08245 PF05974 Domain of unknown function (DUF892) ISN35_08250 PF05974 Domain of unknown function (DUF892) ISN35_08265 PF03707 Bacterial signalling protein N terminal repeat ISN35_08265 PF00990 Diguanylate cyclase, GGDEF domain ISN35_08265 PF00563 EAL domain ISN35_08270 PF06745 KaiC ISN35_08280 PF00440 Bacterial regulatory proteins, tetR family ISN35_08285 PF00970 Oxidoreductase FAD-binding domain ISN35_08285 PF00175 Oxidoreductase NAD-binding domain ISN35_08285 PF00111 2Fe-2S iron-sulfur cluster binding domain ISN35_08290 PF00487 Fatty acid desaturase ISN35_08300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISN35_08300 PF00205 Thiamine pyrophosphate enzyme, central domain ISN35_08300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISN35_08305 PF00512 His Kinase A (phospho-acceptor) domain ISN35_08305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_08310 PF00072 Response regulator receiver domain ISN35_08310 PF00158 Sigma-54 interaction domain ISN35_08310 PF02954 Bacterial regulatory protein, Fis family ISN35_08325 PF07690 Major Facilitator Superfamily ISN35_08335 PF11867 Domain of unknown function (DUF3387) ISN35_08335 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ISN35_08335 PF18766 SWI2/SNF2 ATPase ISN35_08340 PF01420 Type I restriction modification DNA specificity domain ISN35_08350 PF12161 HsdM N-terminal domain ISN35_08350 PF02384 N-6 DNA Methylase ISN35_08365 PF10414 Sirohaem synthase dimerisation region ISN35_08365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISN35_08365 PF14824 Sirohaem biosynthesis protein central ISN35_08370 PF00072 Response regulator receiver domain ISN35_08370 PF01339 CheB methylesterase ISN35_08375 PF00005 ABC transporter ISN35_08380 PF07690 Major Facilitator Superfamily ISN35_08385 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN35_08385 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISN35_08385 PF04324 BFD-like [2Fe-2S] binding domain ISN35_08385 PF18267 Rubredoxin NAD+ reductase C-terminal domain ISN35_08385 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISN35_08390 PF00355 Rieske [2Fe-2S] domain ISN35_08395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISN35_08395 PF00384 Molybdopterin oxidoreductase ISN35_08395 PF01568 Molydopterin dinucleotide binding domain ISN35_08395 PF04324 BFD-like [2Fe-2S] binding domain ISN35_08400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISN35_08405 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISN35_08405 PF00128 Alpha amylase, catalytic domain ISN35_08415 PF00128 Alpha amylase, catalytic domain ISN35_08420 PF02446 4-alpha-glucanotransferase ISN35_08425 PF11941 Domain of unknown function (DUF3459) ISN35_08425 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISN35_08425 PF00128 Alpha amylase, catalytic domain ISN35_08430 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISN35_08430 PF00128 Alpha amylase, catalytic domain ISN35_08430 PF02806 Alpha amylase, C-terminal all-beta domain ISN35_08435 PF08323 Starch synthase catalytic domain ISN35_08435 PF00534 Glycosyl transferases group 1 ISN35_08445 PF00486 Transcriptional regulatory protein, C terminal ISN35_08445 PF00072 Response regulator receiver domain ISN35_08450 PF00512 His Kinase A (phospho-acceptor) domain ISN35_08450 PF08448 PAS fold ISN35_08450 PF00072 Response regulator receiver domain ISN35_08450 PF13188 PAS domain ISN35_08450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_08455 PF13632 Glycosyl transferase family group 2 ISN35_08465 PF04397 LytTr DNA-binding domain ISN35_08465 PF00072 Response regulator receiver domain ISN35_08470 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ISN35_08470 PF03900 Porphobilinogen deaminase, C-terminal domain ISN35_08485 PF01638 HxlR-like helix-turn-helix ISN35_08500 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ISN35_08500 PF00326 Prolyl oligopeptidase family ISN35_08505 PF13333 Integrase core domain ISN35_08505 PF13276 HTH-like domain ISN35_08505 PF00665 Integrase core domain ISN35_08510 PF01527 Transposase ISN35_08515 PF00155 Aminotransferase class I and II ISN35_08520 PF00326 Prolyl oligopeptidase family ISN35_08520 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ISN35_08530 PF04304 Protein of unknown function (DUF454) ISN35_08540 PF01678 Diaminopimelate epimerase ISN35_08550 PF02899 Phage integrase, N-terminal SAM-like domain ISN35_08550 PF00589 Phage integrase family ISN35_08555 PF00227 Proteasome subunit ISN35_08560 PF07724 AAA domain (Cdc48 subfamily) ISN35_08560 PF10431 C-terminal, D2-small domain, of ClpB protein ISN35_08560 PF00004 ATPase family associated with various cellular activities (AAA) ISN35_08575 PF00593 TonB dependent receptor ISN35_08575 PF07715 TonB-dependent Receptor Plug Domain ISN35_08585 PF01209 ubiE/COQ5 methyltransferase family ISN35_08590 PF01433 Peptidase family M1 domain ISN35_08590 PF11838 ERAP1-like C-terminal domain ISN35_08595 PF00364 Biotin-requiring enzyme ISN35_08595 PF00561 alpha/beta hydrolase fold ISN35_08615 PF00294 pfkB family carbohydrate kinase ISN35_08625 PF04085 rod shape-determining protein MreC ISN35_08635 PF03717 Penicillin-binding Protein dimerisation domain ISN35_08635 PF00905 Penicillin binding protein transpeptidase domain ISN35_08640 PF01098 Cell cycle protein ISN35_08645 PF01083 Cutinase ISN35_08650 PF00295 Glycosyl hydrolases family 28 ISN35_08655 PF13406 Transglycosylase SLT domain ISN35_08660 PF05036 Sporulation related domain ISN35_08660 PF03330 Lytic transglycolase ISN35_08665 PF00768 D-alanyl-D-alanine carboxypeptidase ISN35_08665 PF07943 Penicillin-binding protein 5, C-terminal domain ISN35_08690 PF04359 Protein of unknown function (DUF493) ISN35_08695 PF03099 Biotin/lipoate A/B protein ligase family ISN35_08700 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ISN35_08700 PF04055 Radical SAM superfamily ISN35_08705 PF00595 PDZ domain ISN35_08705 PF17804 Tail specific protease N-terminal domain ISN35_08705 PF11818 C-terminal domain of tail specific protease (DUF3340) ISN35_08705 PF03572 Peptidase family S41 ISN35_08725 PF01467 Cytidylyltransferase-like ISN35_08725 PF00293 NUDIX domain ISN35_08760 PF06969 HemN C-terminal domain ISN35_08760 PF04055 Radical SAM superfamily ISN35_08765 PF01725 Ham1 family ISN35_08770 PF01138 3' exoribonuclease family, domain 1 ISN35_08770 PF03725 3' exoribonuclease family, domain 2 ISN35_08775 PF03755 YicC-like family, N-terminal region ISN35_08775 PF08340 Domain of unknown function (DUF1732) ISN35_08780 PF00625 Guanylate kinase ISN35_08785 PF01192 RNA polymerase Rpb6 ISN35_08790 PF13291 ACT domain ISN35_08790 PF04607 Region found in RelA / SpoT proteins ISN35_08790 PF02824 TGS domain ISN35_08810 PF01042 Endoribonuclease L-PSP ISN35_08815 PF17191 RecG wedge domain ISN35_08815 PF00271 Helicase conserved C-terminal domain ISN35_08815 PF00270 DEAD/DEAH box helicase ISN35_08820 PF01156 Inosine-uridine preferring nucleoside hydrolase ISN35_08825 PF01197 Ribosomal protein L31 ISN35_08830 PF00285 Citrate synthase, C-terminal domain ISN35_08835 PF01527 Transposase ISN35_08845 PF01207 Dihydrouridine synthase (Dus) ISN35_08860 PF00294 pfkB family carbohydrate kinase ISN35_08860 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISN35_08865 PF07662 Na+ dependent nucleoside transporter C-terminus ISN35_08865 PF01773 Na+ dependent nucleoside transporter N-terminus ISN35_08865 PF07670 Nucleoside recognition ISN35_08870 PF00248 Aldo/keto reductase family ISN35_08880 PF00593 TonB dependent receptor ISN35_08880 PF07715 TonB-dependent Receptor Plug Domain ISN35_08905 PF00005 ABC transporter ISN35_08910 PF13472 GDSL-like Lipase/Acylhydrolase family ISN35_08915 PF00486 Transcriptional regulatory protein, C terminal ISN35_08915 PF00072 Response regulator receiver domain ISN35_08920 PF08521 Two-component sensor kinase N-terminal ISN35_08920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_08920 PF00512 His Kinase A (phospho-acceptor) domain ISN35_08930 PF01219 Prokaryotic diacylglycerol kinase ISN35_08935 PF03741 Integral membrane protein TerC family ISN35_08940 PF04011 LemA family ISN35_08955 PF01790 Prolipoprotein diacylglyceryl transferase ISN35_08960 PF00303 Thymidylate synthase ISN35_08965 PF00186 Dihydrofolate reductase ISN35_08975 PF00149 Calcineurin-like phosphoesterase ISN35_08980 PF04379 ApaG domain ISN35_08985 PF00398 Ribosomal RNA adenine dimethylase ISN35_08990 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ISN35_08995 PF09312 SurA N-terminal domain ISN35_08995 PF00639 PPIC-type PPIASE domain ISN35_09000 PF04453 LPS transport system D ISN35_09000 PF03968 OstA-like protein ISN35_09005 PF00850 Histone deacetylase domain ISN35_09010 PF01923 Cobalamin adenosyltransferase ISN35_09020 PF01494 FAD binding domain ISN35_09025 PF01494 FAD binding domain ISN35_09040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISN35_09040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISN35_09045 PF01728 FtsJ-like methyltransferase ISN35_09045 PF18125 RlmM ferredoxin-like domain ISN35_09065 PF00892 EamA-like transporter family ISN35_09070 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ISN35_09070 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISN35_09095 PF01625 Peptide methionine sulfoxide reductase ISN35_09100 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISN35_09105 PF14760 Rnk N-terminus ISN35_09105 PF01272 Transcription elongation factor, GreA/GreB, C-term ISN35_09115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN35_09115 PF03466 LysR substrate binding domain ISN35_09120 PF13192 Thioredoxin domain ISN35_09120 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN35_09125 PF10417 C-terminal domain of 1-Cys peroxiredoxin ISN35_09125 PF00578 AhpC/TSA family ISN35_09130 PF17827 PrmC N-terminal domain ISN35_09130 PF05175 Methyltransferase small domain ISN35_09155 PF00593 TonB dependent receptor ISN35_09155 PF07715 TonB-dependent Receptor Plug Domain ISN35_09160 PF07715 TonB-dependent Receptor Plug Domain ISN35_09160 PF00593 TonB dependent receptor ISN35_09165 PF00005 ABC transporter ISN35_09165 PF12848 ABC transporter ISN35_09175 PF03466 LysR substrate binding domain ISN35_09175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN35_09190 PF05506 Domain of unknown function (DUF756) ISN35_09190 PF04185 Phosphoesterase family ISN35_09215 PF03462 PCRF domain ISN35_09215 PF00472 RF-1 domain ISN35_09220 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ISN35_09220 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ISN35_09220 PF01488 Shikimate / quinate 5-dehydrogenase ISN35_09230 PF03550 Outer membrane lipoprotein LolB ISN35_09235 PF08544 GHMP kinases C terminal ISN35_09235 PF00288 GHMP kinases N terminal domain ISN35_09245 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ISN35_09245 PF14572 Phosphoribosyl synthetase-associated domain ISN35_09250 PF01386 Ribosomal L25p family ISN35_09250 PF14693 Ribosomal protein TL5, C-terminal domain ISN35_09255 PF01195 Peptidyl-tRNA hydrolase ISN35_09260 PF01926 50S ribosome-binding GTPase ISN35_09260 PF06071 Protein of unknown function (DUF933) ISN35_09280 PF03143 Elongation factor Tu C-terminal domain ISN35_09280 PF03144 Elongation factor Tu domain 2 ISN35_09280 PF00009 Elongation factor Tu GTP binding domain ISN35_09290 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ISN35_09295 PF02357 Transcription termination factor nusG ISN35_09295 PF00467 KOW motif ISN35_09300 PF00298 Ribosomal protein L11, RNA binding domain ISN35_09300 PF03946 Ribosomal protein L11, N-terminal domain ISN35_09305 PF00687 Ribosomal protein L1p/L10e family ISN35_09310 PF00466 Ribosomal protein L10 ISN35_09315 PF16320 Ribosomal protein L7/L12 dimerisation domain ISN35_09315 PF00542 Ribosomal protein L7/L12 C-terminal domain ISN35_09320 PF04563 RNA polymerase beta subunit ISN35_09320 PF04560 RNA polymerase Rpb2, domain 7 ISN35_09320 PF00562 RNA polymerase Rpb2, domain 6 ISN35_09320 PF10385 RNA polymerase beta subunit external 1 domain ISN35_09320 PF04561 RNA polymerase Rpb2, domain 2 ISN35_09320 PF04565 RNA polymerase Rpb2, domain 3 ISN35_09325 PF00623 RNA polymerase Rpb1, domain 2 ISN35_09325 PF05000 RNA polymerase Rpb1, domain 4 ISN35_09325 PF04983 RNA polymerase Rpb1, domain 3 ISN35_09325 PF04997 RNA polymerase Rpb1, domain 1 ISN35_09325 PF04998 RNA polymerase Rpb1, domain 5 ISN35_09330 PF00164 Ribosomal protein S12/S23 ISN35_09335 PF00177 Ribosomal protein S7p/S5e ISN35_09340 PF03764 Elongation factor G, domain IV ISN35_09340 PF03144 Elongation factor Tu domain 2 ISN35_09340 PF14492 Elongation Factor G, domain II ISN35_09340 PF00679 Elongation factor G C-terminus ISN35_09340 PF00009 Elongation factor Tu GTP binding domain ISN35_09345 PF00009 Elongation factor Tu GTP binding domain ISN35_09345 PF03144 Elongation factor Tu domain 2 ISN35_09345 PF03143 Elongation factor Tu C-terminal domain ISN35_09350 PF00338 Ribosomal protein S10p/S20e ISN35_09355 PF00297 Ribosomal protein L3 ISN35_09360 PF00573 Ribosomal protein L4/L1 family ISN35_09365 PF00276 Ribosomal protein L23 ISN35_09370 PF00181 Ribosomal Proteins L2, RNA binding domain ISN35_09370 PF03947 Ribosomal Proteins L2, C-terminal domain ISN35_09375 PF00203 Ribosomal protein S19 ISN35_09380 PF00237 Ribosomal protein L22p/L17e ISN35_09385 PF07650 KH domain ISN35_09385 PF00189 Ribosomal protein S3, C-terminal domain ISN35_09390 PF00252 Ribosomal protein L16p/L10e ISN35_09395 PF00831 Ribosomal L29 protein ISN35_09400 PF00366 Ribosomal protein S17 ISN35_09405 PF00238 Ribosomal protein L14p/L23e ISN35_09410 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ISN35_09410 PF00467 KOW motif ISN35_09415 PF00673 ribosomal L5P family C-terminus ISN35_09415 PF00281 Ribosomal protein L5 ISN35_09420 PF00253 Ribosomal protein S14p/S29e ISN35_09425 PF00410 Ribosomal protein S8 ISN35_09430 PF00347 Ribosomal protein L6 ISN35_09435 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ISN35_09440 PF03719 Ribosomal protein S5, C-terminal domain ISN35_09440 PF00333 Ribosomal protein S5, N-terminal domain ISN35_09445 PF00327 Ribosomal protein L30p/L7e ISN35_09450 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ISN35_09455 PF00344 SecY translocase ISN35_09460 PF00416 Ribosomal protein S13/S18 ISN35_09465 PF00411 Ribosomal protein S11 ISN35_09470 PF00163 Ribosomal protein S4/S9 N-terminal domain ISN35_09470 PF01479 S4 domain ISN35_09475 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ISN35_09475 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ISN35_09475 PF01000 RNA polymerase Rpb3/RpoA insert domain ISN35_09480 PF01196 Ribosomal protein L17 ISN35_09485 PF02600 Disulfide bond formation protein DsbB ISN35_09495 PF01474 Class-II DAHP synthetase family ISN35_09510 PF00679 Elongation factor G C-terminus ISN35_09510 PF03144 Elongation factor Tu domain 2 ISN35_09510 PF00009 Elongation factor Tu GTP binding domain ISN35_09515 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISN35_09525 PF00056 lactate/malate dehydrogenase, NAD binding domain ISN35_09525 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ISN35_09540 PF00043 Glutathione S-transferase, C-terminal domain ISN35_09540 PF02798 Glutathione S-transferase, N-terminal domain ISN35_09560 PF03009 Glycerophosphoryl diester phosphodiesterase family ISN35_09585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISN35_09585 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN35_09590 PF00107 Zinc-binding dehydrogenase ISN35_09590 PF08240 Alcohol dehydrogenase GroES-like domain ISN35_09595 PF00248 Aldo/keto reductase family ISN35_09610 PF07690 Major Facilitator Superfamily ISN35_09620 PF00223 Photosystem I psaA/psaB protein ISN35_09620 PF00691 OmpA family ISN35_09630 PF00849 RNA pseudouridylate synthase ISN35_09635 PF00155 Aminotransferase class I and II ISN35_09645 PF00528 Binding-protein-dependent transport system inner membrane component ISN35_09650 PF00528 Binding-protein-dependent transport system inner membrane component ISN35_09655 PF12857 TOBE-like domain ISN35_09655 PF00005 ABC transporter ISN35_09655 PF17850 CysA C-terminal regulatory domain ISN35_09665 PF08240 Alcohol dehydrogenase GroES-like domain ISN35_09665 PF00107 Zinc-binding dehydrogenase ISN35_09670 PF10459 Peptidase S46 ISN35_09675 PF00300 Histidine phosphatase superfamily (branch 1) ISN35_09680 PF02875 Mur ligase family, glutamate ligase domain ISN35_09680 PF08245 Mur ligase middle domain ISN35_09695 PF00156 Phosphoribosyl transferase domain ISN35_09700 PF04305 Protein of unknown function (DUF455) ISN35_09715 PF00149 Calcineurin-like phosphoesterase ISN35_09720 PF01569 PAP2 superfamily ISN35_09725 PF00534 Glycosyl transferases group 1 ISN35_09725 PF13439 Glycosyltransferase Family 4 ISN35_09730 PF02541 Ppx/GppA phosphatase family ISN35_09735 PF17941 Polyphosphate kinase C-terminal domain 1 ISN35_09735 PF13090 Polyphosphate kinase C-terminal domain 2 ISN35_09735 PF13089 Polyphosphate kinase N-terminal domain ISN35_09735 PF02503 Polyphosphate kinase middle domain ISN35_09740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_09740 PF11808 Phosphate regulon sensor protein PhoR ISN35_09740 PF00989 PAS fold ISN35_09740 PF00512 His Kinase A (phospho-acceptor) domain ISN35_09745 PF00072 Response regulator receiver domain ISN35_09745 PF00486 Transcriptional regulatory protein, C terminal ISN35_09750 PF13181 Tetratricopeptide repeat ISN35_09750 PF01435 Peptidase family M48 ISN35_09755 PF00462 Glutaredoxin ISN35_09765 PF18324 Hypothetical protein TT1725 ISN35_09765 PF00180 Isocitrate/isopropylmalate dehydrogenase ISN35_09805 PF05697 Bacterial trigger factor protein (TF) ISN35_09805 PF05698 Bacterial trigger factor protein (TF) C-terminus ISN35_09810 PF00574 Clp protease ISN35_09815 PF07724 AAA domain (Cdc48 subfamily) ISN35_09815 PF10431 C-terminal, D2-small domain, of ClpB protein ISN35_09815 PF06689 ClpX C4-type zinc finger ISN35_09820 PF05362 Lon protease (S16) C-terminal proteolytic domain ISN35_09820 PF02190 ATP-dependent protease La (LON) substrate-binding domain ISN35_09820 PF00004 ATPase family associated with various cellular activities (AAA) ISN35_09825 PF00216 Bacterial DNA-binding protein ISN35_09850 PF05257 CHAP domain ISN35_09850 PF01476 LysM domain ISN35_09855 PF16123 Hydroxyacylglutathione hydrolase C-terminus ISN35_09855 PF00753 Metallo-beta-lactamase superfamily ISN35_09865 PF00075 RNase H ISN35_09870 PF00929 Exonuclease ISN35_09895 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISN35_09905 PF12706 Beta-lactamase superfamily domain ISN35_09910 PF04055 Radical SAM superfamily ISN35_09910 PF06463 Molybdenum Cofactor Synthesis C ISN35_09920 PF01967 MoaC family ISN35_09925 PF02597 ThiS family ISN35_09930 PF02391 MoaE protein ISN35_09955 PF12169 DNA polymerase III subunits gamma and tau domain III ISN35_09955 PF12170 DNA polymerase III tau subunit V interacting with alpha ISN35_09955 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ISN35_09960 PF02575 YbaB/EbfC DNA-binding family ISN35_09965 PF02132 RecR protein ISN35_09965 PF13662 Toprim domain ISN35_09970 PF01230 HIT domain ISN35_09980 PF01841 Transglutaminase-like superfamily ISN35_09980 PF11992 Domain of unknown function (DUF3488) ISN35_09980 PF13559 Domain of unknown function (DUF4129) ISN35_09990 PF07726 ATPase family associated with various cellular activities (AAA) ISN35_09990 PF17863 AAA lid domain ISN35_10010 PF02545 Maf-like protein ISN35_10015 PF02620 Large ribosomal RNA subunit accumulation protein YceD ISN35_10020 PF01783 Ribosomal L32p protein family ISN35_10025 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISN35_10025 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISN35_10030 PF00698 Acyl transferase domain ISN35_10040 PF00550 Phosphopantetheine attachment site ISN35_10045 PF00109 Beta-ketoacyl synthase, N-terminal domain ISN35_10045 PF02801 Beta-ketoacyl synthase, C-terminal domain ISN35_10050 PF00425 chorismate binding enzyme ISN35_10050 PF04715 Anthranilate synthase component I, N terminal region ISN35_10055 PF02618 YceG-like family ISN35_10060 PF02223 Thymidylate kinase ISN35_10065 PF09115 DNA polymerase III, delta subunit, C terminal ISN35_10090 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system ISN35_10095 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ISN35_10100 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ISN35_10100 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ISN35_10130 PF14579 Helix-hairpin-helix motif ISN35_10130 PF01336 OB-fold nucleic acid binding domain ISN35_10130 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ISN35_10130 PF07733 Bacterial DNA polymerase III alpha NTPase domain ISN35_10130 PF02811 PHP domain ISN35_10145 PF00717 Peptidase S24-like ISN35_10145 PF01726 LexA DNA binding domain ISN35_10150 PF00285 Citrate synthase, C-terminal domain ISN35_10160 PF00285 Citrate synthase, C-terminal domain ISN35_10165 PF00330 Aconitase family (aconitate hydratase) ISN35_10165 PF00694 Aconitase C-terminal domain ISN35_10175 PF04303 PrpF protein ISN35_10180 PF07715 TonB-dependent Receptor Plug Domain ISN35_10180 PF00593 TonB dependent receptor ISN35_10190 PF07703 Alpha-2-macroglobulin bait region domain ISN35_10190 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain ISN35_10190 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ISN35_10190 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ISN35_10190 PF17962 Bacterial macroglobulin domain 6 ISN35_10190 PF01835 MG2 domain ISN35_10190 PF00207 Alpha-2-macroglobulin family ISN35_10190 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ISN35_10210 PF00905 Penicillin binding protein transpeptidase domain ISN35_10210 PF00912 Transglycosylase ISN35_10210 PF06832 Penicillin-Binding Protein C-terminus Family ISN35_10220 PF08534 Redoxin ISN35_10230 PF00226 DnaJ domain ISN35_10230 PF01556 DnaJ C terminal domain ISN35_10240 PF00072 Response regulator receiver domain ISN35_10245 PF08240 Alcohol dehydrogenase GroES-like domain ISN35_10245 PF00107 Zinc-binding dehydrogenase ISN35_10250 PF01145 SPFH domain / Band 7 family ISN35_10250 PF12221 Bacterial membrane protein N terminal ISN35_10255 PF01145 SPFH domain / Band 7 family ISN35_10265 PF00709 Adenylosuccinate synthetase ISN35_10275 PF01433 Peptidase family M1 domain ISN35_10280 PF13333 Integrase core domain ISN35_10280 PF00665 Integrase core domain ISN35_10280 PF13276 HTH-like domain ISN35_10310 PF17755 UvrA DNA-binding domain ISN35_10320 PF10091 Putative glucoamylase ISN35_10320 PF06165 Glycosyltransferase family 36 ISN35_10320 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ISN35_10330 PF13823 Alcohol dehydrogenase GroES-associated ISN35_10330 PF00107 Zinc-binding dehydrogenase ISN35_10330 PF08240 Alcohol dehydrogenase GroES-like domain ISN35_10340 PF02585 GlcNAc-PI de-N-acetylase ISN35_10345 PF13649 Methyltransferase domain ISN35_10355 PF00199 Catalase ISN35_10355 PF06628 Catalase-related immune-responsive ISN35_10355 PF18011 C-terminal domain found in long catalases ISN35_10365 PF02347 Glycine cleavage system P-protein ISN35_10380 PF00664 ABC transporter transmembrane region ISN35_10380 PF00005 ABC transporter ISN35_10380 PF03412 Peptidase C39 family ISN35_10385 PF07690 Major Facilitator Superfamily ISN35_10405 PF08019 Phosphoethanolamine transferase EptA/EptB ISN35_10405 PF00884 Sulfatase ISN35_10415 PF00072 Response regulator receiver domain ISN35_10415 PF00486 Transcriptional regulatory protein, C terminal ISN35_10420 PF13493 Domain of unknown function (DUF4118) ISN35_10420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_10420 PF00512 His Kinase A (phospho-acceptor) domain ISN35_10420 PF02702 Osmosensitive K+ channel His kinase sensor domain ISN35_10430 PF03776 Septum formation topological specificity factor MinE ISN35_10435 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ISN35_10440 PF03775 Septum formation inhibitor MinC, C-terminal domain ISN35_10440 PF05209 Septum formation inhibitor MinC, N-terminal domain ISN35_10450 PF07730 Histidine kinase ISN35_10455 PF00196 Bacterial regulatory proteins, luxR family ISN35_10455 PF00072 Response regulator receiver domain ISN35_10470 PF00730 HhH-GPD superfamily base excision DNA repair protein ISN35_10475 PF00535 Glycosyl transferase family 2 ISN35_10480 PF00912 Transglycosylase ISN35_10480 PF14814 Bifunctional transglycosylase second domain ISN35_10480 PF00905 Penicillin binding protein transpeptidase domain ISN35_10490 PF13307 Helicase C-terminal domain ISN35_10490 PF04851 Type III restriction enzyme, res subunit ISN35_10495 PF00814 Glycoprotease family ISN35_10510 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ISN35_10510 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ISN35_10515 PF00072 Response regulator receiver domain ISN35_10520 PF00072 Response regulator receiver domain ISN35_10525 PF01584 CheW-like domain ISN35_10530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_10530 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ISN35_10535 PF01627 Hpt domain ISN35_10535 PF00072 Response regulator receiver domain ISN35_10535 PF02895 Signal transducing histidine kinase, homodimeric domain ISN35_10535 PF01584 CheW-like domain ISN35_10535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_10540 PF01339 CheB methylesterase ISN35_10540 PF00072 Response regulator receiver domain ISN35_10550 PF05593 RHS Repeat ISN35_10550 PF03527 RHS protein ISN35_10555 PF01112 Asparaginase ISN35_10560 PF03932 CutC family ISN35_10580 PF01336 OB-fold nucleic acid binding domain ISN35_10580 PF00152 tRNA synthetases class II (D, K and N) ISN35_10580 PF02938 GAD domain ISN35_10600 PF01709 Transcriptional regulator ISN35_10605 PF02075 Crossover junction endodeoxyribonuclease RuvC ISN35_10610 PF01330 RuvA N terminal domain ISN35_10610 PF07499 RuvA, C-terminal domain ISN35_10615 PF02705 K+ potassium transporter ISN35_10620 PF05496 Holliday junction DNA helicase RuvB P-loop domain ISN35_10620 PF17864 RuvB AAA lid domain ISN35_10620 PF05491 RuvB C-terminal winged helix domain ISN35_10625 PF03061 Thioesterase superfamily ISN35_10630 PF01618 MotA/TolQ/ExbB proton channel family ISN35_10635 PF02472 Biopolymer transport protein ExbD/TolR ISN35_10645 PF07676 WD40-like Beta Propeller Repeat ISN35_10645 PF04052 TolB amino-terminal domain ISN35_10650 PF00691 OmpA family ISN35_10660 PF04055 Radical SAM superfamily ISN35_10665 PF06508 Queuosine biosynthesis protein QueC ISN35_10685 PF00570 HRDC domain ISN35_10685 PF16124 RecQ zinc-binding ISN35_10685 PF09382 RQC domain ISN35_10685 PF00271 Helicase conserved C-terminal domain ISN35_10685 PF00270 DEAD/DEAH box helicase ISN35_10690 PF00210 Ferritin-like domain ISN35_10695 PF00270 DEAD/DEAH box helicase ISN35_10695 PF04408 Helicase associated domain (HA2) ISN35_10695 PF11898 Domain of unknown function (DUF3418) ISN35_10695 PF00271 Helicase conserved C-terminal domain ISN35_10695 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ISN35_10700 PF00654 Voltage gated chloride channel ISN35_10710 PF04055 Radical SAM superfamily ISN35_10710 PF13186 Iron-sulfur cluster-binding domain ISN35_10715 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ISN35_10720 PF03070 TENA/THI-4/PQQC family ISN35_10725 PF12706 Beta-lactamase superfamily domain ISN35_10740 PF13291 ACT domain ISN35_10740 PF04607 Region found in RelA / SpoT proteins ISN35_10740 PF02824 TGS domain ISN35_10785 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ISN35_10785 PF00355 Rieske [2Fe-2S] domain ISN35_10790 PF01370 NAD dependent epimerase/dehydratase family ISN35_10790 PF02222 ATP-grasp domain ISN35_10800 PF04376 Arginine-tRNA-protein transferase, N terminus ISN35_10800 PF04377 Arginine-tRNA-protein transferase, C terminus ISN35_10805 PF13202 EF hand ISN35_10805 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISN35_10820 PF00378 Enoyl-CoA hydratase/isomerase ISN35_10835 PF17760 UvrA interaction domain ISN35_10835 PF17755 UvrA DNA-binding domain ISN35_10835 PF00005 ABC transporter ISN35_10840 PF00829 Ribosomal prokaryotic L21 protein ISN35_10845 PF01016 Ribosomal L27 protein ISN35_10855 PF01018 GTP1/OBG ISN35_10855 PF01926 50S ribosome-binding GTPase ISN35_10860 PF01649 Ribosomal protein S20 ISN35_10865 PF03023 Lipid II flippase MurJ ISN35_10890 PF01687 Riboflavin kinase ISN35_10890 PF06574 FAD synthetase ISN35_10895 PF06827 Zinc finger found in FPG and IleRS ISN35_10895 PF00133 tRNA synthetases class I (I, L, M and V) ISN35_10895 PF08264 Anticodon-binding domain of tRNA ISN35_10900 PF01252 Signal peptidase (SPase) II ISN35_10905 PF02401 LytB protein ISN35_10925 PF06481 COX Aromatic Rich Motif ISN35_10925 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ISN35_10930 PF00115 Cytochrome C and Quinol oxidase polypeptide I ISN35_10935 PF00510 Cytochrome c oxidase subunit III ISN35_10940 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ISN35_10950 PF00155 Aminotransferase class I and II ISN35_10955 PF18073 Rubredoxin metal binding domain ISN35_10960 PF05656 Protein of unknown function (DUF805) ISN35_10990 PF00072 Response regulator receiver domain ISN35_10990 PF00486 Transcriptional regulatory protein, C terminal ISN35_11020 PF01313 Bacterial export proteins, family 3 ISN35_11025 PF00813 FliP family ISN35_11040 PF00771 FHIPEP family ISN35_11045 PF01312 FlhB HrpN YscU SpaS Family ISN35_11060 PF01514 Secretory protein of YscJ/FliF family ISN35_11070 PF06635 Nodulation protein NolV ISN35_11075 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISN35_11075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISN35_11075 PF18269 T3SS EscN ATPase C-terminal domain ISN35_11090 PF12833 Helix-turn-helix domain ISN35_11095 PF00263 Bacterial type II and III secretion system protein ISN35_11095 PF03958 Bacterial type II/III secretion system short domain ISN35_11110 PF01464 Transglycosylase SLT domain ISN35_11115 PF00920 Dehydratase family ISN35_11125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN35_11125 PF03466 LysR substrate binding domain ISN35_11135 PF00171 Aldehyde dehydrogenase family ISN35_11140 PF13407 Periplasmic binding protein domain ISN35_11145 PF00005 ABC transporter ISN35_11150 PF02653 Branched-chain amino acid transport system / permease component ISN35_11155 PF02653 Branched-chain amino acid transport system / permease component ISN35_11165 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation ISN35_11165 PF14508 Glycosyl-hydrolase 97 N-terminal ISN35_11165 PF10566 Glycoside hydrolase 97 ISN35_11170 PF00043 Glutathione S-transferase, C-terminal domain ISN35_11170 PF13417 Glutathione S-transferase, N-terminal domain ISN35_11185 PF00999 Sodium/hydrogen exchanger family ISN35_11195 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ISN35_11200 PF01263 Aldose 1-epimerase ISN35_11210 PF02881 SRP54-type protein, helical bundle domain ISN35_11210 PF02978 Signal peptide binding domain ISN35_11210 PF00448 SRP54-type protein, GTPase domain ISN35_11215 PF03060 Nitronate monooxygenase ISN35_11225 PF00886 Ribosomal protein S16 ISN35_11230 PF01782 RimM N-terminal domain ISN35_11230 PF05239 PRC-barrel domain ISN35_11235 PF01746 tRNA (Guanine-1)-methyltransferase ISN35_11240 PF01245 Ribosomal protein L19 ISN35_11245 PF01554 MatE ISN35_11255 PF01479 S4 domain ISN35_11260 PF00141 Peroxidase ISN35_11275 PF05188 MutS domain II ISN35_11275 PF05190 MutS family domain IV ISN35_11275 PF01624 MutS domain I ISN35_11275 PF00488 MutS domain V ISN35_11275 PF05192 MutS domain III ISN35_11285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN35_11290 PF03601 Conserved hypothetical protein 698 ISN35_11295 PF01545 Cation efflux family ISN35_11305 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISN35_11305 PF00378 Enoyl-CoA hydratase/isomerase ISN35_11305 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISN35_11310 PF08281 Sigma-70, region 4 ISN35_11310 PF04542 Sigma-70 region 2 ISN35_11320 PF13180 PDZ domain ISN35_11325 PF06421 GTP-binding protein LepA C-terminus ISN35_11325 PF03144 Elongation factor Tu domain 2 ISN35_11325 PF00009 Elongation factor Tu GTP binding domain ISN35_11325 PF00679 Elongation factor G C-terminus ISN35_11330 PF10502 Signal peptidase, peptidase S26 ISN35_11340 PF00035 Double-stranded RNA binding motif ISN35_11340 PF14622 Ribonuclease-III-like ISN35_11345 PF07650 KH domain ISN35_11345 PF01926 50S ribosome-binding GTPase ISN35_11355 PF00486 Transcriptional regulatory protein, C terminal ISN35_11355 PF00072 Response regulator receiver domain ISN35_11360 PF05958 tRNA (Uracil-5-)-methyltransferase ISN35_11365 PF01928 CYTH domain ISN35_11375 PF00933 Glycosyl hydrolase family 3 N terminal domain ISN35_11380 PF00156 Phosphoribosyl transferase domain ISN35_11385 PF01048 Phosphorylase superfamily ISN35_11390 PF00313 'Cold-shock' DNA-binding domain ISN35_11395 PF01494 FAD binding domain ISN35_11405 PF00271 Helicase conserved C-terminal domain ISN35_11405 PF08494 DEAD/H associated ISN35_11405 PF00270 DEAD/DEAH box helicase ISN35_11410 PF04675 DNA ligase N terminus ISN35_11410 PF04679 ATP dependent DNA ligase C terminal region ISN35_11410 PF01068 ATP dependent DNA ligase domain ISN35_11415 PF01068 ATP dependent DNA ligase domain ISN35_11415 PF04675 DNA ligase N terminus ISN35_11415 PF04679 ATP dependent DNA ligase C terminal region ISN35_11435 PF00072 Response regulator receiver domain ISN35_11435 PF00990 Diguanylate cyclase, GGDEF domain ISN35_11450 PF00012 Hsp70 protein ISN35_11460 PF02803 Thiolase, C-terminal domain ISN35_11460 PF00108 Thiolase, N-terminal domain ISN35_11465 PF12951 Passenger-associated-transport-repeat ISN35_11465 PF00082 Subtilase family ISN35_11465 PF03797 Autotransporter beta-domain ISN35_11470 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ISN35_11470 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ISN35_11490 PF02310 B12 binding domain ISN35_11490 PF01642 Methylmalonyl-CoA mutase ISN35_11555 PF02837 Glycosyl hydrolases family 2, sugar binding domain ISN35_11555 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ISN35_11555 PF02929 Beta galactosidase small chain ISN35_11555 PF16353 Domain of unknown function(DUF4981) ISN35_11555 PF00703 Glycosyl hydrolases family 2 ISN35_11560 PF07729 FCD domain ISN35_11560 PF00392 Bacterial regulatory proteins, gntR family ISN35_11565 PF01011 PQQ enzyme repeat ISN35_11565 PF13360 PQQ-like domain ISN35_11570 PF00072 Response regulator receiver domain ISN35_11570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_11570 PF00672 HAMP domain ISN35_11570 PF00512 His Kinase A (phospho-acceptor) domain ISN35_11570 PF01627 Hpt domain ISN35_11575 PF13472 GDSL-like Lipase/Acylhydrolase family ISN35_11595 PF01863 Protein of unknown function DUF45 ISN35_11605 PF01258 Prokaryotic dksA/traR C4-type zinc finger ISN35_11635 PF05175 Methyltransferase small domain ISN35_11635 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus ISN35_11645 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISN35_11650 PF03831 PhnA domain ISN35_11650 PF08274 PhnA Zinc-Ribbon ISN35_11655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISN35_11665 PF07690 Major Facilitator Superfamily ISN35_11695 PF09924 Uncharacterised conserved protein (DUF2156) ISN35_11695 PF03706 Lysylphosphatidylglycerol synthase TM region ISN35_11705 PF01042 Endoribonuclease L-PSP ISN35_11750 PF04545 Sigma-70, region 4 ISN35_11750 PF04542 Sigma-70 region 2 ISN35_11765 PF04060 Putative Fe-S cluster ISN35_11775 PF09334 tRNA synthetases class I (M) ISN35_11775 PF01588 Putative tRNA binding domain ISN35_11785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISN35_11795 PF00324 Amino acid permease ISN35_11800 PF02574 Homocysteine S-methyltransferase ISN35_11810 PF02592 Putative vitamin uptake transporter ISN35_11830 PF00085 Thioredoxin ISN35_11840 PF13603 Leucyl-tRNA synthetase, Domain 2 ISN35_11840 PF00133 tRNA synthetases class I (I, L, M and V) ISN35_11840 PF08264 Anticodon-binding domain of tRNA ISN35_11855 PF01467 Cytidylyltransferase-like ISN35_11870 PF02590 Predicted SPOUT methyltransferase ISN35_11875 PF07715 TonB-dependent Receptor Plug Domain ISN35_11875 PF00593 TonB dependent receptor ISN35_11885 PF04402 Protein of unknown function (DUF541) ISN35_11890 PF02545 Maf-like protein ISN35_11895 PF00575 S1 RNA binding domain ISN35_11895 PF10150 Ribonuclease E/G family ISN35_11905 PF01523 Putative modulator of DNA gyrase ISN35_11910 PF04751 Protein of unknown function (DUF615) ISN35_11915 PF01523 Putative modulator of DNA gyrase ISN35_11925 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISN35_11930 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISN35_11935 PF05638 Type VI secretion system effector, Hcp ISN35_11940 PF07024 ImpE protein ISN35_11945 PF04965 Gene 25-like lysozyme ISN35_11950 PF05947 Type VI secretion system, TssF ISN35_11960 PF17871 AAA lid domain ISN35_11960 PF10431 C-terminal, D2-small domain, of ClpB protein ISN35_11960 PF00004 ATPase family associated with various cellular activities (AAA) ISN35_11960 PF07724 AAA domain (Cdc48 subfamily) ISN35_11980 PF04717 Type VI secretion system, phage-baseplate injector ISN35_11980 PF06715 Gp5 C-terminal repeat (3 copies) ISN35_11995 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISN35_12005 PF06761 Intracellular multiplication and human macrophage-killing ISN35_12005 PF14331 ImcF-related N-terminal domain ISN35_12005 PF06744 Type VI secretion protein IcmF C-terminal ISN35_12020 PF00069 Protein kinase domain ISN35_12020 PF03793 PASTA domain ISN35_12030 PF06812 ImpA, N-terminal, type VI secretion system ISN35_12035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN35_12035 PF03466 LysR substrate binding domain ISN35_12040 PF00512 His Kinase A (phospho-acceptor) domain ISN35_12040 PF08448 PAS fold ISN35_12040 PF13188 PAS domain ISN35_12040 PF00072 Response regulator receiver domain ISN35_12040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_12045 PF03150 Di-haem cytochrome c peroxidase ISN35_12045 PF00034 Cytochrome c ISN35_12050 PF00486 Transcriptional regulatory protein, C terminal ISN35_12050 PF00072 Response regulator receiver domain ISN35_12055 PF00348 Polyprenyl synthetase ISN35_12060 PF02609 Exonuclease VII small subunit ISN35_12065 PF01171 PP-loop family ISN35_12065 PF09179 TilS substrate binding domain ISN35_12065 PF11734 TilS substrate C-terminal domain ISN35_12075 PF00245 Alkaline phosphatase ISN35_12080 PF00375 Sodium:dicarboxylate symporter family ISN35_12090 PF03061 Thioesterase superfamily ISN35_12105 PF00877 NlpC/P60 family ISN35_12110 PF00877 NlpC/P60 family ISN35_12115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISN35_12120 PF04235 Protein of unknown function (DUF418) ISN35_12125 PF01266 FAD dependent oxidoreductase ISN35_12130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISN35_12130 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN35_12135 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA ISN35_12140 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA ISN35_12145 PF00892 EamA-like transporter family ISN35_12175 PF01431 Peptidase family M13 ISN35_12175 PF05649 Peptidase family M13 ISN35_12190 PF13181 Tetratricopeptide repeat ISN35_12195 PF07715 TonB-dependent Receptor Plug Domain ISN35_12195 PF00593 TonB dependent receptor ISN35_12200 PF07715 TonB-dependent Receptor Plug Domain ISN35_12200 PF00593 TonB dependent receptor ISN35_12210 PF10609 NUBPL iron-transfer P-loop NTPase ISN35_12215 PF00692 dUTPase ISN35_12220 PF06271 RDD family ISN35_12235 PF01738 Dienelactone hydrolase family ISN35_12240 PF01272 Transcription elongation factor, GreA/GreB, C-term ISN35_12240 PF03449 Transcription elongation factor, N-terminal ISN35_12255 PF00293 NUDIX domain ISN35_12260 PF05872 Bacterial protein of unknown function (DUF853) ISN35_12265 PF06737 Transglycosylase-like domain ISN35_12270 PF02666 Phosphatidylserine decarboxylase ISN35_12275 PF02630 SCO1/SenC ISN35_12280 PF05175 Methyltransferase small domain ISN35_12285 PF01264 Chorismate synthase ISN35_12290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISN35_12290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISN35_12295 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISN35_12295 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISN35_12305 PF01416 tRNA pseudouridine synthase ISN35_12310 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ISN35_12315 PF05816 Toxic anion resistance protein (TelA) ISN35_12320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN35_12320 PF03466 LysR substrate binding domain ISN35_12325 PF00291 Pyridoxal-phosphate dependent enzyme ISN35_12335 PF00290 Tryptophan synthase alpha chain ISN35_12340 PF01039 Carboxyl transferase domain ISN35_12340 PF17848 Acetyl-coA carboxylase zinc finger domain ISN35_12345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISN35_12345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISN35_12345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISN35_12345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISN35_12355 PF01965 DJ-1/PfpI family ISN35_12370 PF00121 Triosephosphate isomerase ISN35_12385 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ISN35_12390 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ISN35_12395 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ISN35_12400 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ISN35_12410 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ISN35_12410 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISN35_12410 PF10531 SLBB domain ISN35_12415 PF00384 Molybdopterin oxidoreductase ISN35_12415 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ISN35_12415 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ISN35_12420 PF00146 NADH dehydrogenase ISN35_12425 PF12838 4Fe-4S dicluster domain ISN35_12430 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ISN35_12435 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ISN35_12440 PF00361 Proton-conducting membrane transporter ISN35_12440 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ISN35_12445 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ISN35_12445 PF00361 Proton-conducting membrane transporter ISN35_12450 PF00361 Proton-conducting membrane transporter ISN35_12460 PF02576 RimP N-terminal domain ISN35_12460 PF17384 RimP C-terminal SH3 domain ISN35_12465 PF13184 NusA-like KH domain ISN35_12465 PF08529 NusA N-terminal domain ISN35_12465 PF00575 S1 RNA binding domain ISN35_12470 PF00009 Elongation factor Tu GTP binding domain ISN35_12470 PF11987 Translation-initiation factor 2 ISN35_12470 PF08364 Bacterial translation initiation factor IF-2 associated region ISN35_12470 PF04760 Translation initiation factor IF-2, N-terminal region ISN35_12475 PF02033 Ribosome-binding factor A ISN35_12480 PF01509 TruB family pseudouridylate synthase (N terminal domain) ISN35_12480 PF09157 Pseudouridine synthase II TruB, C-terminal ISN35_12480 PF16198 tRNA pseudouridylate synthase B C-terminal domain ISN35_12485 PF00312 Ribosomal protein S15 ISN35_12490 PF00013 KH domain ISN35_12490 PF00575 S1 RNA binding domain ISN35_12490 PF03725 3' exoribonuclease family, domain 2 ISN35_12490 PF01138 3' exoribonuclease family, domain 1 ISN35_12490 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ISN35_12495 PF13188 PAS domain ISN35_12495 PF03707 Bacterial signalling protein N terminal repeat ISN35_12495 PF00990 Diguanylate cyclase, GGDEF domain ISN35_12495 PF00563 EAL domain ISN35_12515 PF02743 Cache domain ISN35_12515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_12515 PF00672 HAMP domain ISN35_12520 PF02203 Tar ligand binding domain homologue ISN35_12520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_12520 PF00672 HAMP domain ISN35_12525 PF01584 CheW-like domain ISN35_12545 PF00570 HRDC domain ISN35_12545 PF01612 3'-5' exonuclease ISN35_12565 PF04362 Bacterial Fe(2+) trafficking ISN35_12570 PF00730 HhH-GPD superfamily base excision DNA repair protein ISN35_12570 PF00633 Helix-hairpin-helix motif ISN35_12570 PF10576 Iron-sulfur binding domain of endonuclease III ISN35_12570 PF14815 NUDIX domain ISN35_12575 PF02881 SRP54-type protein, helical bundle domain ISN35_12575 PF00448 SRP54-type protein, GTPase domain ISN35_12585 PF05544 Proline racemase ISN35_12590 PF01266 FAD dependent oxidoreductase ISN35_12600 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN35_12600 PF17806 Sarcosine oxidase A3 domain ISN35_12605 PF00701 Dihydrodipicolinate synthetase family ISN35_12610 PF00171 Aldehyde dehydrogenase family ISN35_12615 PF00557 Metallopeptidase family M24 ISN35_12615 PF01321 Creatinase/Prolidase N-terminal domain ISN35_12630 PF13520 Amino acid permease ISN35_12655 PF07715 TonB-dependent Receptor Plug Domain ISN35_12655 PF00593 TonB dependent receptor ISN35_12660 PF07532 Bacterial Ig-like domain (group 4) ISN35_12665 PF04616 Glycosyl hydrolases family 43 ISN35_12675 PF00593 TonB dependent receptor ISN35_12675 PF07715 TonB-dependent Receptor Plug Domain ISN35_12685 PF07715 TonB-dependent Receptor Plug Domain ISN35_12685 PF00593 TonB dependent receptor ISN35_12690 PF02615 Malate/L-lactate dehydrogenase ISN35_12695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_12695 PF00183 Hsp90 protein ISN35_12705 PF01467 Cytidylyltransferase-like ISN35_12715 PF00037 4Fe-4S binding domain ISN35_12725 PF00753 Metallo-beta-lactamase superfamily ISN35_12730 PF00759 Glycosyl hydrolase family 9 ISN35_12730 PF02927 Cellulase N-terminal ig-like domain ISN35_12745 PF00202 Aminotransferase class-III ISN35_12755 PF02547 Queuosine biosynthesis protein ISN35_12760 PF01702 Queuine tRNA-ribosyltransferase ISN35_12765 PF02699 Preprotein translocase subunit ISN35_12770 PF13721 SecD export protein N-terminal TM region ISN35_12770 PF02355 Protein export membrane protein ISN35_12770 PF07549 SecD/SecF GG Motif ISN35_12775 PF02355 Protein export membrane protein ISN35_12775 PF07549 SecD/SecF GG Motif ISN35_12780 PF00459 Inositol monophosphatase family ISN35_12785 PF00588 SpoU rRNA Methylase family ISN35_12795 PF00563 EAL domain ISN35_12795 PF01590 GAF domain ISN35_12795 PF00360 Phytochrome region ISN35_12795 PF00990 Diguanylate cyclase, GGDEF domain ISN35_12800 PF04055 Radical SAM superfamily ISN35_12805 PF09285 Elongation factor P, C-terminal ISN35_12805 PF08207 Elongation factor P (EF-P) KOW-like domain ISN35_12805 PF01132 Elongation factor P (EF-P) OB domain ISN35_12810 PF06736 Protein of unknown function (DUF1211) ISN35_12815 PF01979 Amidohydrolase family ISN35_12825 PF13419 Haloacid dehalogenase-like hydrolase ISN35_12835 PF01095 Pectinesterase ISN35_12840 PF00295 Glycosyl hydrolases family 28 ISN35_12845 PF01095 Pectinesterase ISN35_12850 PF01551 Peptidase family M23 ISN35_12850 PF08460 Bacterial SH3 domain ISN35_12855 PF01979 Amidohydrolase family ISN35_12860 PF01809 Putative membrane protein insertion efficiency factor ISN35_12865 PF01258 Prokaryotic dksA/traR C4-type zinc finger ISN35_12890 PF13360 PQQ-like domain ISN35_12890 PF01011 PQQ enzyme repeat ISN35_12925 PF02657 Fe-S metabolism associated domain ISN35_12930 PF09190 DALR domain ISN35_12930 PF01406 tRNA synthetases class I (C) catalytic domain ISN35_12940 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISN35_12940 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISN35_12945 PF00764 Arginosuccinate synthase ISN35_12950 PF01546 Peptidase family M20/M25/M40 ISN35_12950 PF07687 Peptidase dimerisation domain ISN35_12955 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase ISN35_12955 PF00696 Amino acid kinase family ISN35_12965 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISN35_12970 PF00206 Lyase ISN35_12985 PF01472 PUA domain ISN35_12985 PF00696 Amino acid kinase family ISN35_12990 PF00171 Aldehyde dehydrogenase family ISN35_12995 PF13276 HTH-like domain ISN35_12995 PF13683 Integrase core domain ISN35_13010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISN35_13010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISN35_13020 PF00083 Sugar (and other) transporter ISN35_13025 PF11741 AMIN domain ISN35_13025 PF01520 N-acetylmuramoyl-L-alanine amidase ISN35_13030 PF02649 Type I GTP cyclohydrolase folE2 ISN35_13035 PF00132 Bacterial transferase hexapeptide (six repeats) ISN35_13045 PF12627 Probable RNA and SrmB- binding site of polymerase A ISN35_13045 PF12626 Polymerase A arginine-rich C-terminus ISN35_13045 PF01743 Poly A polymerase head domain ISN35_13050 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ISN35_13055 PF02548 Ketopantoate hydroxymethyltransferase ISN35_13060 PF02569 Pantoate-beta-alanine ligase ISN35_13065 PF02261 Aspartate decarboxylase ISN35_13070 PF00342 Phosphoglucose isomerase ISN35_13110 PF04717 Type VI secretion system, phage-baseplate injector ISN35_13110 PF06715 Gp5 C-terminal repeat (3 copies) ISN35_13120 PF14310 Fibronectin type III-like domain ISN35_13120 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISN35_13120 PF00933 Glycosyl hydrolase family 3 N terminal domain ISN35_13125 PF00474 Sodium:solute symporter family ISN35_13130 PF00563 EAL domain ISN35_13130 PF00990 Diguanylate cyclase, GGDEF domain ISN35_13130 PF03707 Bacterial signalling protein N terminal repeat ISN35_13135 PF02954 Bacterial regulatory protein, Fis family ISN35_13135 PF00072 Response regulator receiver domain ISN35_13145 PF04551 GcpE protein ISN35_13150 PF01569 PAP2 superfamily ISN35_13175 PF01565 FAD binding domain ISN35_13175 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ISN35_13180 PF01180 Dihydroorotate dehydrogenase ISN35_13195 PF00171 Aldehyde dehydrogenase family ISN35_13210 PF00696 Amino acid kinase family ISN35_13210 PF13840 ACT domain ISN35_13210 PF01842 ACT domain ISN35_13210 PF03447 Homoserine dehydrogenase, NAD binding domain ISN35_13210 PF00742 Homoserine dehydrogenase ISN35_13215 PF00288 GHMP kinases N terminal domain ISN35_13215 PF08544 GHMP kinases C terminal ISN35_13220 PF13406 Transglycosylase SLT domain ISN35_13225 PF07519 Tannase and feruloyl esterase ISN35_13230 PF00291 Pyridoxal-phosphate dependent enzyme ISN35_13230 PF14821 Threonine synthase N terminus ISN35_13240 PF00027 Cyclic nucleotide-binding domain ISN35_13240 PF13545 Crp-like helix-turn-helix domain ISN35_13245 PF13393 Histidyl-tRNA synthetase ISN35_13245 PF03129 Anticodon binding domain ISN35_13255 PF01634 ATP phosphoribosyltransferase ISN35_13255 PF08029 HisG, C-terminal domain ISN35_13260 PF00815 Histidinol dehydrogenase ISN35_13265 PF00155 Aminotransferase class I and II ISN35_13270 PF00475 Imidazoleglycerol-phosphate dehydratase ISN35_13275 PF00117 Glutamine amidotransferase class-I ISN35_13280 PF00977 Histidine biosynthesis protein ISN35_13285 PF00977 Histidine biosynthesis protein ISN35_13290 PF01502 Phosphoribosyl-AMP cyclohydrolase ISN35_13290 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ISN35_13310 PF03079 ARD/ARD' family ISN35_13315 PF00596 Class II Aldolase and Adducin N-terminal domain ISN35_13320 PF13520 Amino acid permease ISN35_13325 PF13520 Amino acid permease ISN35_13340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISN35_13340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISN35_13345 PF02913 FAD linked oxidases, C-terminal domain ISN35_13345 PF01565 FAD binding domain ISN35_13365 PF08207 Elongation factor P (EF-P) KOW-like domain ISN35_13365 PF09285 Elongation factor P, C-terminal ISN35_13365 PF01132 Elongation factor P (EF-P) OB domain ISN35_13370 PF00106 short chain dehydrogenase ISN35_13375 PF00682 HMGL-like ISN35_13380 PF00378 Enoyl-CoA hydratase/isomerase ISN35_13390 PF07664 Ferrous iron transport protein B C terminus ISN35_13390 PF07670 Nucleoside recognition ISN35_13390 PF02421 Ferrous iron transport protein B ISN35_13405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISN35_13405 PF02824 TGS domain ISN35_13405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISN35_13405 PF03129 Anticodon binding domain ISN35_13410 PF00707 Translation initiation factor IF-3, C-terminal domain ISN35_13410 PF05198 Translation initiation factor IF-3, N-terminal domain ISN35_13415 PF01632 Ribosomal protein L35 ISN35_13420 PF00453 Ribosomal protein L20 ISN35_13425 PF01409 tRNA synthetases class II core domain (F) ISN35_13425 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ISN35_13430 PF03484 tRNA synthetase B5 domain ISN35_13430 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ISN35_13430 PF01588 Putative tRNA binding domain ISN35_13430 PF03147 Ferredoxin-fold anticodon binding domain ISN35_13430 PF03483 B3/4 domain ISN35_13435 PF00216 Bacterial DNA-binding protein ISN35_13440 PF13411 MerR HTH family regulatory protein ISN35_13460 PF02397 Bacterial sugar transferase ISN35_13475 PF13439 Glycosyltransferase Family 4 ISN35_13475 PF00534 Glycosyl transferases group 1 ISN35_13485 PF14667 Polysaccharide biosynthesis C-terminal domain ISN35_13500 PF03808 Glycosyl transferase WecB/TagA/CpsF family ISN35_13510 PF02780 Transketolase, C-terminal domain ISN35_13510 PF02779 Transketolase, pyrimidine binding domain ISN35_13510 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ISN35_13520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISN35_13520 PF12806 Acetyl-CoA dehydrogenase C-terminal like ISN35_13520 PF02770 Acyl-CoA dehydrogenase, middle domain ISN35_13520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISN35_13565 PF13742 OB-fold nucleic acid binding domain ISN35_13565 PF02601 Exonuclease VII, large subunit ISN35_13570 PF08331 Domain of unknown function (DUF1730) ISN35_13575 PF01256 Carbohydrate kinase ISN35_13575 PF03853 YjeF-related protein N-terminus ISN35_13580 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ISN35_13585 PF11741 AMIN domain ISN35_13585 PF01520 N-acetylmuramoyl-L-alanine amidase ISN35_13590 PF08676 MutL C terminal dimerisation domain ISN35_13590 PF01119 DNA mismatch repair protein, C-terminal domain ISN35_13605 PF05233 PHB accumulation regulatory domain ISN35_13605 PF07879 PHB/PHA accumulation regulator DNA-binding domain ISN35_13610 PF00106 short chain dehydrogenase ISN35_13615 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISN35_13620 PF01435 Peptidase family M48 ISN35_13625 PF00990 Diguanylate cyclase, GGDEF domain ISN35_13625 PF00072 Response regulator receiver domain ISN35_13625 PF00563 EAL domain ISN35_13635 PF07152 YaeQ protein ISN35_13640 PF00849 RNA pseudouridylate synthase ISN35_13645 PF00313 'Cold-shock' DNA-binding domain ISN35_13650 PF02798 Glutathione S-transferase, N-terminal domain ISN35_13650 PF00043 Glutathione S-transferase, C-terminal domain ISN35_13660 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ISN35_13670 PF00529 HlyD membrane-fusion protein of T1SS ISN35_13670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN35_13675 PF00873 AcrB/AcrD/AcrF family ISN35_13680 PF00156 Phosphoribosyl transferase domain ISN35_13685 PF03880 DbpA RNA binding domain ISN35_13685 PF00270 DEAD/DEAH box helicase ISN35_13685 PF00271 Helicase conserved C-terminal domain ISN35_13690 PF12848 ABC transporter ISN35_13690 PF16326 ABC transporter C-terminal domain ISN35_13690 PF00005 ABC transporter ISN35_13700 PF00545 ribonuclease ISN35_13705 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISN35_13705 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISN35_13715 PF14310 Fibronectin type III-like domain ISN35_13715 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISN35_13715 PF00933 Glycosyl hydrolase family 3 N terminal domain ISN35_13725 PF00854 POT family ISN35_13755 PF01047 MarR family ISN35_13770 PF00255 Glutathione peroxidase ISN35_13775 PF00175 Oxidoreductase NAD-binding domain ISN35_13775 PF00970 Oxidoreductase FAD-binding domain ISN35_13785 PF00005 ABC transporter ISN35_13795 PF02627 Carboxymuconolactone decarboxylase family ISN35_13800 PF04542 Sigma-70 region 2 ISN35_13800 PF08281 Sigma-70, region 4 ISN35_13805 PF05681 Fumarate hydratase (Fumerase) ISN35_13805 PF05683 Fumarase C-terminus ISN35_13820 PF02253 Phospholipase A1 ISN35_13830 PF00313 'Cold-shock' DNA-binding domain ISN35_13845 PF00899 ThiF family ISN35_13850 PF01026 TatD related DNase ISN35_13865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISN35_13865 PF02770 Acyl-CoA dehydrogenase, middle domain ISN35_13865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISN35_13870 PF03358 NADPH-dependent FMN reductase ISN35_13875 PF03796 DnaB-like helicase C terminal domain ISN35_13875 PF00772 DnaB-like helicase N terminal domain ISN35_13880 PF03441 FAD binding domain of DNA photolyase ISN35_13880 PF00875 DNA photolyase ISN35_13885 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain ISN35_13885 PF06974 Protein of unknown function (DUF1298) ISN35_13890 PF05736 OprF membrane domain ISN35_13890 PF00691 OmpA family ISN35_13895 PF03466 LysR substrate binding domain ISN35_13895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN35_13910 PF00529 HlyD membrane-fusion protein of T1SS ISN35_13910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN35_13915 PF00873 AcrB/AcrD/AcrF family ISN35_13920 PF00106 short chain dehydrogenase ISN35_13925 PF02321 Outer membrane efflux protein ISN35_13945 PF00082 Subtilase family ISN35_13955 PF01668 SmpB protein ISN35_13960 PF03364 Polyketide cyclase / dehydrase and lipid transport ISN35_13965 PF03658 RnfH family Ubiquitin ISN35_13970 PF04355 SmpA / OmlA family ISN35_13975 PF01475 Ferric uptake regulator family ISN35_13980 PF02463 RecF/RecN/SMC N terminal domain ISN35_13985 PF01628 HrcA protein C terminal domain ISN35_13985 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ISN35_13990 PF01025 GrpE ISN35_13995 PF00012 Hsp70 protein ISN35_14000 PF01556 DnaJ C terminal domain ISN35_14000 PF00684 DnaJ central domain ISN35_14000 PF00226 DnaJ domain ISN35_14005 PF08543 Phosphomethylpyrimidine kinase ISN35_14010 PF02153 Prephenate dehydrogenase ISN35_14010 PF01817 Chorismate mutase type II ISN35_14020 PF00005 ABC transporter ISN35_14020 PF00664 ABC transporter transmembrane region ISN35_14025 PF01205 Uncharacterized protein family UPF0029 ISN35_14035 PF08281 Sigma-70, region 4 ISN35_14035 PF04542 Sigma-70 region 2 ISN35_14040 PF03707 Bacterial signalling protein N terminal repeat ISN35_14040 PF00990 Diguanylate cyclase, GGDEF domain ISN35_14040 PF00563 EAL domain ISN35_14045 PF03641 Possible lysine decarboxylase ISN35_14050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISN35_14050 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN35_14055 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISN35_14055 PF00364 Biotin-requiring enzyme ISN35_14055 PF02817 e3 binding domain ISN35_14060 PF02779 Transketolase, pyrimidine binding domain ISN35_14060 PF16078 2-oxoglutarate dehydrogenase N-terminus ISN35_14060 PF16870 2-oxoglutarate dehydrogenase C-terminal ISN35_14060 PF00676 Dehydrogenase E1 component ISN35_14070 PF08007 Cupin superfamily protein ISN35_14075 PF00223 Photosystem I psaA/psaB protein ISN35_14075 PF00691 OmpA family ISN35_14085 PF08328 Adenylosuccinate lyase C-terminal ISN35_14085 PF00206 Lyase ISN35_14095 PF00206 Lyase ISN35_14095 PF10415 Fumarase C C-terminus ISN35_14120 PF00005 ABC transporter ISN35_14125 PF00392 Bacterial regulatory proteins, gntR family ISN35_14135 PF00255 Glutathione peroxidase ISN35_14140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISN35_14140 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISN35_14145 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISN35_14145 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISN35_14145 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISN35_14150 PF04102 SlyX ISN35_14160 PF01757 Acyltransferase family ISN35_14170 PF02965 Vitamin B12 dependent methionine synthase, activation domain ISN35_14170 PF02574 Homocysteine S-methyltransferase ISN35_14170 PF00809 Pterin binding enzyme ISN35_14170 PF02310 B12 binding domain ISN35_14170 PF02607 B12 binding domain ISN35_14175 PF02574 Homocysteine S-methyltransferase ISN35_14175 PF00809 Pterin binding enzyme ISN35_14180 PF01209 ubiE/COQ5 methyltransferase family ISN35_14185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISN35_14185 PF02770 Acyl-CoA dehydrogenase, middle domain ISN35_14185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISN35_14190 PF05598 Transposase domain (DUF772) ISN35_14190 PF01609 Transposase DDE domain ISN35_14235 PF00114 Pilin (bacterial filament) ISN35_14235 PF07963 Prokaryotic N-terminal methylation motif ISN35_14240 PF04851 Type III restriction enzyme, res subunit ISN35_14240 PF17757 UvrB interaction domain ISN35_14240 PF00271 Helicase conserved C-terminal domain ISN35_14240 PF12344 Ultra-violet resistance protein B ISN35_14240 PF02151 UvrB/uvrC motif ISN35_14255 PF00873 AcrB/AcrD/AcrF family ISN35_14260 PF00529 HlyD membrane-fusion protein of T1SS ISN35_14260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN35_14270 PF05088 Bacterial NAD-glutamate dehydrogenase ISN35_14295 PF02322 Cytochrome bd terminal oxidase subunit II ISN35_14300 PF01654 Cytochrome bd terminal oxidase subunit I ISN35_14305 PF00664 ABC transporter transmembrane region ISN35_14305 PF00005 ABC transporter ISN35_14310 PF00005 ABC transporter ISN35_14310 PF00664 ABC transporter transmembrane region ISN35_14315 PF00561 alpha/beta hydrolase fold ISN35_14325 PF03918 Cytochrome C biogenesis protein ISN35_14330 PF08534 Redoxin ISN35_14335 PF01578 Cytochrome C assembly protein ISN35_14335 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ISN35_14340 PF03100 CcmE ISN35_14350 PF01578 Cytochrome C assembly protein ISN35_14355 PF03379 CcmB protein ISN35_14360 PF00005 ABC transporter ISN35_14365 PF00155 Aminotransferase class I and II ISN35_14370 PF00795 Carbon-nitrogen hydrolase ISN35_14390 PF01479 S4 domain ISN35_14390 PF00849 RNA pseudouridylate synthase ISN35_14395 PF04079 Segregation and condensation complex subunit ScpB ISN35_14400 PF02616 Segregation and condensation protein ScpA ISN35_14405 PF03795 YCII-related domain ISN35_14415 PF00356 Bacterial regulatory proteins, lacI family ISN35_14435 PF00528 Binding-protein-dependent transport system inner membrane component ISN35_14440 PF00528 Binding-protein-dependent transport system inner membrane component ISN35_14450 PF01081 KDPG and KHG aldolase ISN35_14455 PF00920 Dehydratase family ISN35_14460 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ISN35_14465 PF02685 Glucokinase ISN35_14470 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ISN35_14470 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ISN35_14475 PF00005 ABC transporter ISN35_14475 PF17912 MalK OB fold domain ISN35_14480 PF01571 Aminomethyltransferase folate-binding domain ISN35_14490 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISN35_14495 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISN35_14500 PF00890 FAD binding domain ISN35_14500 PF02910 Fumarate reductase flavoprotein C-term ISN35_14505 PF13085 2Fe-2S iron-sulfur cluster binding domain ISN35_14510 PF03937 Flavinator of succinate dehydrogenase ISN35_14520 PF12704 MacB-like periplasmic core domain ISN35_14520 PF02687 FtsX-like permease family ISN35_14525 PF00005 ABC transporter ISN35_14535 PF03772 Competence protein ISN35_14535 PF00753 Metallo-beta-lactamase superfamily ISN35_14540 PF01618 MotA/TolQ/ExbB proton channel family ISN35_14550 PF00005 ABC transporter ISN35_14550 PF00664 ABC transporter transmembrane region ISN35_14555 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ISN35_14560 PF02348 Cytidylyltransferase ISN35_14565 PF01451 Low molecular weight phosphotyrosine protein phosphatase ISN35_14575 PF02151 UvrB/uvrC motif ISN35_14575 PF08459 UvrC Helix-hairpin-helix N-terminal ISN35_14575 PF01541 GIY-YIG catalytic domain ISN35_14580 PF01066 CDP-alcohol phosphatidyltransferase ISN35_14620 PF00202 Aminotransferase class-III ISN35_14625 PF00109 Beta-ketoacyl synthase, N-terminal domain ISN35_14625 PF02801 Beta-ketoacyl synthase, C-terminal domain ISN35_14630 PF00550 Phosphopantetheine attachment site ISN35_14670 PF00664 ABC transporter transmembrane region ISN35_14670 PF00005 ABC transporter ISN35_14685 PF00196 Bacterial regulatory proteins, luxR family ISN35_14685 PF00072 Response regulator receiver domain ISN35_14695 PF10150 Ribonuclease E/G family ISN35_14695 PF12111 Polyribonucleotide phosphorylase C terminal ISN35_14695 PF00575 S1 RNA binding domain ISN35_14700 PF01479 S4 domain ISN35_14700 PF00849 RNA pseudouridylate synthase ISN35_14710 PF02535 ZIP Zinc transporter ISN35_14720 PF01329 Pterin 4 alpha carbinolamine dehydratase ISN35_14725 PF01106 NifU-like domain ISN35_14735 PF00034 Cytochrome c ISN35_14740 PF00034 Cytochrome c ISN35_14745 PF00529 HlyD membrane-fusion protein of T1SS ISN35_14745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN35_14755 PF00873 AcrB/AcrD/AcrF family ISN35_14765 PF00795 Carbon-nitrogen hydrolase ISN35_14770 PF04371 Porphyromonas-type peptidyl-arginine deiminase ISN35_14780 PF00444 Ribosomal protein L36 ISN35_14785 PF02224 Cytidylate kinase ISN35_14790 PF00575 S1 RNA binding domain ISN35_14795 PF00216 Bacterial DNA-binding protein ISN35_14805 PF18073 Rubredoxin metal binding domain ISN35_14810 PF00953 Glycosyl transferase family 4 ISN35_14815 PF02719 Polysaccharide biosynthesis protein ISN35_14820 PF00483 Nucleotidyl transferase ISN35_14825 PF02803 Thiolase, C-terminal domain ISN35_14825 PF00108 Thiolase, N-terminal domain ISN35_14830 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISN35_14830 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISN35_14830 PF00378 Enoyl-CoA hydratase/isomerase ISN35_14840 PF00334 Nucleoside diphosphate kinase ISN35_14845 PF04055 Radical SAM superfamily ISN35_14855 PF13464 Domain of unknown function (DUF4115) ISN35_14865 PF13360 PQQ-like domain ISN35_14865 PF01011 PQQ enzyme repeat ISN35_14870 PF01926 50S ribosome-binding GTPase ISN35_14870 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ISN35_14875 PF12804 MobA-like NTP transferase domain ISN35_14880 PF03454 MoeA C-terminal region (domain IV) ISN35_14880 PF03453 MoeA N-terminal region (domain I and II) ISN35_14880 PF00994 Probable molybdopterin binding domain ISN35_14885 PF00899 ThiF family ISN35_14890 PF00999 Sodium/hydrogen exchanger family ISN35_14890 PF02254 TrkA-N domain ISN35_14910 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ISN35_14910 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ISN35_14915 PF00478 IMP dehydrogenase / GMP reductase domain ISN35_14915 PF00571 CBS domain ISN35_14920 PF00117 Glutamine amidotransferase class-I ISN35_14920 PF02540 NAD synthase ISN35_14920 PF00958 GMP synthase C terminal domain ISN35_14925 PF01055 Glycosyl hydrolases family 31 ISN35_14925 PF17137 Domain of unknown function (DUF5110) ISN35_14925 PF16338 Domain of unknown function (DUF4968) ISN35_14930 PF06745 KaiC ISN35_14935 PF00072 Response regulator receiver domain ISN35_14935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_14935 PF00512 His Kinase A (phospho-acceptor) domain ISN35_14935 PF08448 PAS fold ISN35_14935 PF13188 PAS domain ISN35_14940 PF01566 Natural resistance-associated macrophage protein ISN35_14945 PF02742 Iron dependent repressor, metal binding and dimerisation domain ISN35_14945 PF01325 Iron dependent repressor, N-terminal DNA binding domain ISN35_14950 PF14437 MafB19-like deaminase ISN35_14955 PF00929 Exonuclease ISN35_14960 PF05552 Conserved TM helix ISN35_14960 PF00924 Mechanosensitive ion channel ISN35_14965 PF02896 PEP-utilising enzyme, TIM barrel domain ISN35_14965 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ISN35_14965 PF00391 PEP-utilising enzyme, mobile domain ISN35_14970 PF03618 Kinase/pyrophosphorylase ISN35_14990 PF01066 CDP-alcohol phosphatidyltransferase ISN35_15000 PF00561 alpha/beta hydrolase fold ISN35_15020 PF01266 FAD dependent oxidoreductase ISN35_15020 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ISN35_15030 PF13426 PAS domain ISN35_15030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_15030 PF00072 Response regulator receiver domain ISN35_15035 PF16921 Tex protein YqgF-like domain ISN35_15035 PF09371 Tex-like protein N-terminal domain ISN35_15035 PF17674 HHH domain ISN35_15035 PF00575 S1 RNA binding domain ISN35_15040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_15040 PF00072 Response regulator receiver domain ISN35_15040 PF09308 LuxQ, periplasmic ISN35_15040 PF00512 His Kinase A (phospho-acceptor) domain ISN35_15110 PF02638 Glycosyl hydrolase-like 10 ISN35_15120 PF01070 FMN-dependent dehydrogenase ISN35_15125 PF00155 Aminotransferase class I and II ISN35_15140 PF00501 AMP-binding enzyme ISN35_15140 PF00975 Thioesterase domain ISN35_15140 PF00550 Phosphopantetheine attachment site ISN35_15140 PF00668 Condensation domain ISN35_15140 PF13193 AMP-binding enzyme C-terminal domain ISN35_15145 PF00501 AMP-binding enzyme ISN35_15145 PF00975 Thioesterase domain ISN35_15145 PF13193 AMP-binding enzyme C-terminal domain ISN35_15145 PF00668 Condensation domain ISN35_15145 PF00550 Phosphopantetheine attachment site ISN35_15150 PF13193 AMP-binding enzyme C-terminal domain ISN35_15150 PF00501 AMP-binding enzyme ISN35_15150 PF00668 Condensation domain ISN35_15150 PF00550 Phosphopantetheine attachment site ISN35_15155 PF13193 AMP-binding enzyme C-terminal domain ISN35_15155 PF00501 AMP-binding enzyme ISN35_15155 PF00668 Condensation domain ISN35_15155 PF00550 Phosphopantetheine attachment site ISN35_15155 PF00975 Thioesterase domain ISN35_15160 PF00501 AMP-binding enzyme ISN35_15160 PF13193 AMP-binding enzyme C-terminal domain ISN35_15160 PF00975 Thioesterase domain ISN35_15160 PF00550 Phosphopantetheine attachment site ISN35_15160 PF00668 Condensation domain ISN35_15165 PF00668 Condensation domain ISN35_15165 PF00550 Phosphopantetheine attachment site ISN35_15165 PF00975 Thioesterase domain ISN35_15165 PF00501 AMP-binding enzyme ISN35_15165 PF13193 AMP-binding enzyme C-terminal domain ISN35_15170 PF02797 Chalcone and stilbene synthases, C-terminal domain ISN35_15170 PF00195 Chalcone and stilbene synthases, N-terminal domain ISN35_15180 PF00378 Enoyl-CoA hydratase/isomerase ISN35_15185 PF00155 Aminotransferase class I and II ISN35_15190 PF00378 Enoyl-CoA hydratase/isomerase ISN35_15195 PF00005 ABC transporter ISN35_15195 PF00664 ABC transporter transmembrane region ISN35_15200 PF03621 MbtH-like protein ISN35_15205 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain ISN35_15205 PF12706 Beta-lactamase superfamily domain ISN35_15210 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain ISN35_15210 PF12706 Beta-lactamase superfamily domain ISN35_15230 PF04717 Type VI secretion system, phage-baseplate injector ISN35_15410 PF01368 DHH family ISN35_15410 PF02272 DHHA1 domain ISN35_15410 PF17768 RecJ OB domain ISN35_15420 PF01272 Transcription elongation factor, GreA/GreB, C-term ISN35_15420 PF03449 Transcription elongation factor, N-terminal ISN35_15425 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ISN35_15425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISN35_15425 PF02142 MGS-like domain ISN35_15435 PF00117 Glutamine amidotransferase class-I ISN35_15435 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ISN35_15440 PF01113 Dihydrodipicolinate reductase, N-terminus ISN35_15440 PF05173 Dihydrodipicolinate reductase, C-terminus ISN35_15445 PF03473 MOSC domain ISN35_15445 PF03475 3-alpha domain ISN35_15450 PF00155 Aminotransferase class I and II ISN35_15460 PF00534 Glycosyl transferases group 1 ISN35_15460 PF13579 Glycosyl transferase 4-like domain ISN35_15465 PF13439 Glycosyltransferase Family 4 ISN35_15465 PF00534 Glycosyl transferases group 1 ISN35_15500 PF00535 Glycosyl transferase family 2 ISN35_15505 PF01943 Polysaccharide biosynthesis protein ISN35_15510 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISN35_15530 PF05523 WxcM-like, C-terminal ISN35_15535 PF01292 Prokaryotic cytochrome b561 ISN35_15545 PF00034 Cytochrome c ISN35_15555 PF08281 Sigma-70, region 4 ISN35_15555 PF04542 Sigma-70 region 2 ISN35_15565 PF00082 Subtilase family ISN35_15570 PF01578 Cytochrome C assembly protein ISN35_15580 PF03100 CcmE ISN35_15585 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ISN35_15585 PF01578 Cytochrome C assembly protein ISN35_15590 PF08534 Redoxin ISN35_15595 PF03918 Cytochrome C biogenesis protein ISN35_15610 PF00654 Voltage gated chloride channel ISN35_15615 PF00004 ATPase family associated with various cellular activities (AAA) ISN35_15615 PF16193 AAA C-terminal domain ISN35_15615 PF12002 MgsA AAA+ ATPase C terminal ISN35_15625 PF03548 Outer membrane lipoprotein carrier protein LolA ISN35_15635 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ISN35_15635 PF09397 Ftsk gamma domain ISN35_15635 PF01580 FtsK/SpoIIIE family ISN35_15635 PF17854 FtsK alpha domain ISN35_15640 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN35_15650 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ISN35_15655 PF01176 Translation initiation factor 1A / IF-1 ISN35_15660 PF00004 ATPase family associated with various cellular activities (AAA) ISN35_15660 PF07724 AAA domain (Cdc48 subfamily) ISN35_15660 PF17871 AAA lid domain ISN35_15660 PF02861 Clp amino terminal domain, pathogenicity island component ISN35_15660 PF10431 C-terminal, D2-small domain, of ClpB protein ISN35_15665 PF02617 ATP-dependent Clp protease adaptor protein ClpS ISN35_15675 PF00293 NUDIX domain ISN35_15685 PF04356 Protein of unknown function (DUF489) ISN35_15690 PF12729 Four helix bundle sensory module for signal transduction ISN35_15690 PF00672 HAMP domain ISN35_15690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_15700 PF00005 ABC transporter ISN35_15710 PF00990 Diguanylate cyclase, GGDEF domain ISN35_15710 PF03707 Bacterial signalling protein N terminal repeat ISN35_15710 PF00563 EAL domain ISN35_15715 PF07730 Histidine kinase ISN35_15715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_15720 PF00563 EAL domain ISN35_15720 PF00990 Diguanylate cyclase, GGDEF domain ISN35_15720 PF03707 Bacterial signalling protein N terminal repeat ISN35_15725 PF08448 PAS fold ISN35_15725 PF13188 PAS domain ISN35_15725 PF00072 Response regulator receiver domain ISN35_15725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_15725 PF00512 His Kinase A (phospho-acceptor) domain ISN35_15750 PF00072 Response regulator receiver domain ISN35_15750 PF01584 CheW-like domain ISN35_15760 PF00460 Flagella basal body rod protein ISN35_15760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISN35_15765 PF03963 Flagellar hook capping protein - N-terminal region ISN35_15765 PF13860 FlgD Ig-like domain ISN35_15765 PF13861 FlgD Tudor-like domain ISN35_15770 PF00460 Flagella basal body rod protein ISN35_15770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISN35_15770 PF07559 Flagellar basal body protein FlaE ISN35_15775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISN35_15775 PF00460 Flagella basal body rod protein ISN35_15780 PF00460 Flagella basal body rod protein ISN35_15780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISN35_15785 PF02107 Flagellar L-ring protein ISN35_15790 PF02119 Flagellar P-ring protein ISN35_15795 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ISN35_15795 PF10135 Rod binding protein ISN35_15800 PF00460 Flagella basal body rod protein ISN35_15800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISN35_15800 PF00460 Flagella basal body rod protein ISN35_15800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISN35_15805 PF00669 Bacterial flagellin N-terminal helical region ISN35_15810 PF00700 Bacterial flagellin C-terminal helical region ISN35_15810 PF00669 Bacterial flagellin N-terminal helical region ISN35_15815 PF07195 Flagellar hook-associated protein 2 C-terminus ISN35_15815 PF02465 Flagellar hook-associated protein 2 N-terminus ISN35_15815 PF07196 Flagellin hook IN motif ISN35_15820 PF02561 Flagellar protein FliS ISN35_15835 PF00072 Response regulator receiver domain ISN35_15835 PF00196 Bacterial regulatory proteins, luxR family ISN35_15840 PF00309 Sigma-54 factor, Activator interacting domain (AID) ISN35_15840 PF04963 Sigma-54 factor, core binding domain ISN35_15840 PF04552 Sigma-54, DNA binding domain ISN35_15845 PF00072 Response regulator receiver domain ISN35_15845 PF01339 CheB methylesterase ISN35_15855 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISN35_15865 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISN35_15865 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISN35_15905 PF00534 Glycosyl transferases group 1 ISN35_15905 PF00535 Glycosyl transferase family 2 ISN35_15910 PF02049 Flagellar hook-basal body complex protein FliE ISN35_15915 PF01514 Secretory protein of YscJ/FliF family ISN35_15915 PF08345 Flagellar M-ring protein C-terminal ISN35_15920 PF01706 FliG C-terminal domain ISN35_15920 PF14842 FliG N-terminal domain ISN35_15920 PF14841 FliG middle domain ISN35_15930 PF18269 T3SS EscN ATPase C-terminal domain ISN35_15930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISN35_15950 PF02154 Flagellar motor switch protein FliM ISN35_15950 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISN35_15955 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISN35_15960 PF04347 Flagellar biosynthesis protein, FliO ISN35_15965 PF00813 FliP family ISN35_15970 PF01313 Bacterial export proteins, family 3 ISN35_15975 PF01311 Bacterial export proteins, family 1 ISN35_15980 PF00990 Diguanylate cyclase, GGDEF domain ISN35_15985 PF00990 Diguanylate cyclase, GGDEF domain ISN35_15990 PF01312 FlhB HrpN YscU SpaS Family ISN35_15995 PF00771 FHIPEP family ISN35_16000 PF00448 SRP54-type protein, GTPase domain ISN35_16005 PF10609 NUBPL iron-transfer P-loop NTPase ISN35_16010 PF04542 Sigma-70 region 2 ISN35_16010 PF04539 Sigma-70 region 3 ISN35_16010 PF04545 Sigma-70, region 4 ISN35_16015 PF00072 Response regulator receiver domain ISN35_16020 PF04344 Chemotaxis phosphatase, CheZ ISN35_16025 PF00072 Response regulator receiver domain ISN35_16025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_16025 PF02895 Signal transducing histidine kinase, homodimeric domain ISN35_16025 PF01584 CheW-like domain ISN35_16025 PF01627 Hpt domain ISN35_16030 PF01618 MotA/TolQ/ExbB proton channel family ISN35_16035 PF13677 Membrane MotB of proton-channel complex MotA/MotB ISN35_16035 PF00691 OmpA family ISN35_16040 PF13614 AAA domain ISN35_16045 PF01584 CheW-like domain ISN35_16055 PF00072 Response regulator receiver domain ISN35_16060 PF01584 CheW-like domain ISN35_16060 PF09078 CheY binding ISN35_16060 PF02895 Signal transducing histidine kinase, homodimeric domain ISN35_16060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_16060 PF01627 Hpt domain ISN35_16070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_16070 PF00672 HAMP domain ISN35_16070 PF02203 Tar ligand binding domain homologue ISN35_16075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_16075 PF02203 Tar ligand binding domain homologue ISN35_16075 PF00672 HAMP domain ISN35_16080 PF00672 HAMP domain ISN35_16080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_16080 PF02203 Tar ligand binding domain homologue ISN35_16085 PF00672 HAMP domain ISN35_16085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_16085 PF02203 Tar ligand binding domain homologue ISN35_16095 PF02203 Tar ligand binding domain homologue ISN35_16095 PF00672 HAMP domain ISN35_16095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_16105 PF02203 Tar ligand binding domain homologue ISN35_16105 PF00672 HAMP domain ISN35_16105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_16110 PF00672 HAMP domain ISN35_16110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_16110 PF02203 Tar ligand binding domain homologue ISN35_16115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_16115 PF00672 HAMP domain ISN35_16115 PF02203 Tar ligand binding domain homologue ISN35_16125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_16125 PF02203 Tar ligand binding domain homologue ISN35_16125 PF00672 HAMP domain ISN35_16130 PF07317 Flagellar regulator YcgR ISN35_16130 PF07238 PilZ domain ISN35_16135 PF01584 CheW-like domain ISN35_16145 PF00672 HAMP domain ISN35_16145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_16145 PF02203 Tar ligand binding domain homologue ISN35_16155 PF02203 Tar ligand binding domain homologue ISN35_16155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_16155 PF00672 HAMP domain ISN35_16160 PF03705 CheR methyltransferase, all-alpha domain ISN35_16160 PF01739 CheR methyltransferase, SAM binding domain ISN35_16165 PF03975 CheD chemotactic sensory transduction ISN35_16170 PF00072 Response regulator receiver domain ISN35_16170 PF01339 CheB methylesterase ISN35_16175 PF00563 EAL domain ISN35_16175 PF03707 Bacterial signalling protein N terminal repeat ISN35_16175 PF00990 Diguanylate cyclase, GGDEF domain ISN35_16190 PF00330 Aconitase family (aconitate hydratase) ISN35_16190 PF06434 Aconitate hydratase 2 N-terminus ISN35_16190 PF11791 Aconitate B N-terminal domain ISN35_16205 PF00694 Aconitase C-terminal domain ISN35_16205 PF00330 Aconitase family (aconitate hydratase) ISN35_16215 PF00501 AMP-binding enzyme ISN35_16215 PF13193 AMP-binding enzyme C-terminal domain ISN35_16220 PF00378 Enoyl-CoA hydratase/isomerase ISN35_16225 PF00072 Response regulator receiver domain ISN35_16225 PF01627 Hpt domain ISN35_16225 PF00512 His Kinase A (phospho-acceptor) domain ISN35_16225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_16230 PF00072 Response regulator receiver domain ISN35_16235 PF01336 OB-fold nucleic acid binding domain ISN35_16235 PF00152 tRNA synthetases class II (D, K and N) ISN35_16255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN35_16255 PF03466 LysR substrate binding domain ISN35_16260 PF01081 KDPG and KHG aldolase ISN35_16265 PF13378 Enolase C-terminal domain-like ISN35_16265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISN35_16270 PF08450 SMP-30/Gluconolactonase/LRE-like region ISN35_16275 PF05035 2-keto-3-deoxy-galactonokinase ISN35_16280 PF00037 4Fe-4S binding domain ISN35_16280 PF11953 Domain of unknown function (DUF3470) ISN35_16295 PF00701 Dihydrodipicolinate synthetase family ISN35_16305 PF00578 AhpC/TSA family ISN35_16310 PF02562 PhoH-like protein ISN35_16310 PF13638 PIN domain ISN35_16325 PF03377 TAL effector repeat ISN35_16345 PF14706 Transposase DNA-binding ISN35_16345 PF02281 Transposase Tn5 dimerisation domain ISN35_16345 PF01609 Transposase DDE domain ISN35_16350 PF08543 Phosphomethylpyrimidine kinase ISN35_16350 PF02581 Thiamine monophosphate synthase ISN35_16370 PF03466 LysR substrate binding domain ISN35_16370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN35_16375 PF02678 Pirin ISN35_16375 PF17954 Quercetinase C-terminal cupin domain ISN35_16380 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISN35_16380 PF00128 Alpha amylase, catalytic domain ISN35_16400 PF02599 Global regulator protein family ISN35_16405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISN35_16405 PF01411 tRNA synthetases class II (A) ISN35_16405 PF02272 DHHA1 domain ISN35_16410 PF02631 RecX family ISN35_16415 PF00154 recA bacterial DNA recombination protein ISN35_16420 PF01726 LexA DNA binding domain ISN35_16420 PF00717 Peptidase S24-like ISN35_16425 PF03109 ABC1 family ISN35_16430 PF02464 Competence-damaged protein ISN35_16435 PF13167 GTP-binding GTPase N-terminal ISN35_16435 PF01926 50S ribosome-binding GTPase ISN35_16435 PF16360 GTP-binding GTPase Middle Region ISN35_16440 PF17209 Hfq protein ISN35_16450 PF00809 Pterin binding enzyme ISN35_16455 PF01434 Peptidase family M41 ISN35_16455 PF06480 FtsH Extracellular ISN35_16455 PF00004 ATPase family associated with various cellular activities (AAA) ISN35_16455 PF17862 AAA+ lid domain ISN35_16460 PF01728 FtsJ-like methyltransferase ISN35_16465 PF01985 CRS1 / YhbY (CRM) domain ISN35_16475 PF01551 Peptidase family M23 ISN35_16475 PF01476 LysM domain ISN35_16480 PF09335 SNARE associated Golgi protein ISN35_16490 PF01975 Survival protein SurE ISN35_16495 PF01713 Smr domain ISN35_16500 PF01142 tRNA pseudouridine synthase D (TruD) ISN35_16505 PF02542 YgbB family ISN35_16510 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ISN35_16515 PF04977 Septum formation initiator ISN35_16520 PF00113 Enolase, C-terminal TIM barrel domain ISN35_16520 PF03952 Enolase, N-terminal domain ISN35_16525 PF00793 DAHP synthetase I family ISN35_16530 PF00117 Glutamine amidotransferase class-I ISN35_16530 PF06418 CTP synthase N-terminus ISN35_16540 PF00204 DNA gyrase B ISN35_16540 PF00986 DNA gyrase B subunit, carboxyl terminus ISN35_16540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_16540 PF01751 Toprim domain ISN35_16550 PF01384 Phosphate transporter family ISN35_16560 PF00571 CBS domain ISN35_16560 PF01595 Cyclin M transmembrane N-terminal domain ISN35_16560 PF03471 Transporter associated domain ISN35_16575 PF00296 Luciferase-like monooxygenase ISN35_16585 PF00581 Rhodanese-like domain ISN35_16585 PF17773 UPF0176 acylphosphatase like domain ISN35_16595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISN35_16605 PF00990 Diguanylate cyclase, GGDEF domain ISN35_16605 PF00563 EAL domain ISN35_16605 PF03707 Bacterial signalling protein N terminal repeat ISN35_16610 PF01645 Conserved region in glutamate synthase ISN35_16615 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISN35_16615 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISN35_16615 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISN35_16625 PF00356 Bacterial regulatory proteins, lacI family ISN35_16630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISN35_16630 PF02896 PEP-utilising enzyme, TIM barrel domain ISN35_16630 PF00381 PTS HPr component phosphorylation site ISN35_16630 PF00391 PEP-utilising enzyme, mobile domain ISN35_16630 PF05524 PEP-utilising enzyme, N-terminal ISN35_16635 PF00294 pfkB family carbohydrate kinase ISN35_16640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISN35_16650 PF00486 Transcriptional regulatory protein, C terminal ISN35_16650 PF00072 Response regulator receiver domain ISN35_16655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_16655 PF00512 His Kinase A (phospho-acceptor) domain ISN35_16675 PF02687 FtsX-like permease family ISN35_16675 PF12704 MacB-like periplasmic core domain ISN35_16675 PF00005 ABC transporter ISN35_16725 PF13276 HTH-like domain ISN35_16725 PF00665 Integrase core domain ISN35_16725 PF13333 Integrase core domain ISN35_16730 PF01527 Transposase ISN35_16745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN35_16745 PF03466 LysR substrate binding domain ISN35_16750 PF02403 Seryl-tRNA synthetase N-terminal domain ISN35_16750 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISN35_16755 PF03544 Gram-negative bacterial TonB protein C-terminal ISN35_16765 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISN35_16770 PF01842 ACT domain ISN35_16770 PF00800 Prephenate dehydratase ISN35_16770 PF01817 Chorismate mutase type II ISN35_16775 PF00266 Aminotransferase class-V ISN35_16780 PF00174 Oxidoreductase molybdopterin binding domain ISN35_16785 PF01794 Ferric reductase like transmembrane component ISN35_16820 PF00106 short chain dehydrogenase ISN35_16835 PF07969 Amidohydrolase family ISN35_16840 PF00221 Aromatic amino acid lyase ISN35_16850 PF17392 Urocanase C-terminal domain ISN35_16850 PF17391 Urocanase N-terminal domain ISN35_16850 PF01175 Urocanase Rossmann-like domain ISN35_16865 PF00440 Bacterial regulatory proteins, tetR family ISN35_16880 PF00521 DNA gyrase/topoisomerase IV, subunit A ISN35_16880 PF03989 DNA gyrase C-terminal domain, beta-propeller ISN35_16885 PF01008 Initiation factor 2 subunit family ISN35_16895 PF00152 tRNA synthetases class II (D, K and N) ISN35_16900 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ISN35_16900 PF01653 NAD-dependent DNA ligase adenylation domain ISN35_16900 PF00533 BRCA1 C Terminus (BRCT) domain ISN35_16900 PF12826 Helix-hairpin-helix motif ISN35_16900 PF03120 NAD-dependent DNA ligase OB-fold domain ISN35_16905 PF00155 Aminotransferase class I and II ISN35_16910 PF04354 ZipA, C-terminal FtsZ-binding domain ISN35_16915 PF02463 RecF/RecN/SMC N terminal domain ISN35_16920 PF01281 Ribosomal protein L9, N-terminal domain ISN35_16920 PF03948 Ribosomal protein L9, C-terminal domain ISN35_16925 PF01084 Ribosomal protein S18 ISN35_16930 PF01250 Ribosomal protein S6 ISN35_16940 PF01521 Iron-sulphur cluster biosynthesis ISN35_16945 PF00152 tRNA synthetases class II (D, K and N) ISN35_16945 PF01336 OB-fold nucleic acid binding domain ISN35_16965 PF00072 Response regulator receiver domain ISN35_16965 PF00196 Bacterial regulatory proteins, luxR family ISN35_17010 PF00484 Carbonic anhydrase ISN35_17015 PF06052 3-hydroxyanthranilic acid dioxygenase ISN35_17025 PF00266 Aminotransferase class-V ISN35_17030 PF01494 FAD binding domain ISN35_17035 PF08411 Exonuclease C-terminal ISN35_17035 PF00929 Exonuclease ISN35_17060 PF01513 ATP-NAD kinase ISN35_17070 PF03377 TAL effector repeat ISN35_17090 PF07963 Prokaryotic N-terminal methylation motif ISN35_17090 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor ISN35_17095 PF05567 Neisseria PilC beta-propeller domain ISN35_17115 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor ISN35_17115 PF07963 Prokaryotic N-terminal methylation motif ISN35_17120 PF07694 5TMR of 5TMR-LYT ISN35_17120 PF06580 Histidine kinase ISN35_17125 PF03641 Possible lysine decarboxylase ISN35_17125 PF11892 Domain of unknown function (DUF3412) ISN35_17125 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ISN35_17130 PF00593 TonB dependent receptor ISN35_17135 PF01914 MarC family integral membrane protein ISN35_17140 PF00106 short chain dehydrogenase ISN35_17145 PF00462 Glutaredoxin ISN35_17150 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISN35_17150 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISN35_17155 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ISN35_17155 PF02222 ATP-grasp domain ISN35_17160 PF00731 AIR carboxylase ISN35_17170 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ISN35_17170 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ISN35_17185 PF04386 Stringent starvation protein B ISN35_17190 PF02798 Glutathione S-transferase, N-terminal domain ISN35_17190 PF00043 Glutathione S-transferase, C-terminal domain ISN35_17195 PF02167 Cytochrome C1 family ISN35_17205 PF00032 Cytochrome b(C-terminal)/b6/petD ISN35_17205 PF00033 Cytochrome b/b6/petB ISN35_17210 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ISN35_17210 PF00355 Rieske [2Fe-2S] domain ISN35_17215 PF01464 Transglycosylase SLT domain ISN35_17220 PF13417 Glutathione S-transferase, N-terminal domain ISN35_17225 PF04055 Radical SAM superfamily ISN35_17225 PF01938 TRAM domain ISN35_17225 PF00919 Uncharacterized protein family UPF0004 ISN35_17230 PF02562 PhoH-like protein ISN35_17235 PF02130 Uncharacterized protein family UPF0054 ISN35_17245 PF00571 CBS domain ISN35_17245 PF03471 Transporter associated domain ISN35_17260 PF00171 Aldehyde dehydrogenase family ISN35_17265 PF00528 Binding-protein-dependent transport system inner membrane component ISN35_17270 PF00528 Binding-protein-dependent transport system inner membrane component ISN35_17275 PF00005 ABC transporter ISN35_17275 PF08402 TOBE domain ISN35_17280 PF02321 Outer membrane efflux protein ISN35_17285 PF07690 Major Facilitator Superfamily ISN35_17290 PF13533 Biotin-lipoyl like ISN35_17300 PF13416 Bacterial extracellular solute-binding protein ISN35_17305 PF00202 Aminotransferase class-III ISN35_17315 PF00120 Glutamine synthetase, catalytic domain ISN35_17320 PF07722 Peptidase C26 ISN35_17325 PF00120 Glutamine synthetase, catalytic domain ISN35_17330 PF01266 FAD dependent oxidoreductase ISN35_17335 PF00990 Diguanylate cyclase, GGDEF domain ISN35_17335 PF00072 Response regulator receiver domain ISN35_17340 PF07690 Major Facilitator Superfamily ISN35_17340 PF00083 Sugar (and other) transporter ISN35_17345 PF00818 Ice nucleation protein repeat ISN35_17355 PF00384 Molybdopterin oxidoreductase ISN35_17360 PF02634 FdhD/NarQ family ISN35_17365 PF07690 Major Facilitator Superfamily ISN35_17390 PF00171 Aldehyde dehydrogenase family ISN35_17395 PF07883 Cupin domain ISN35_17395 PF01381 Helix-turn-helix ISN35_17400 PF00202 Aminotransferase class-III ISN35_17405 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ISN35_17405 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ISN35_17410 PF00171 Aldehyde dehydrogenase family ISN35_17425 PF04286 Protein of unknown function (DUF445) ISN35_17430 PF00512 His Kinase A (phospho-acceptor) domain ISN35_17430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISN35_17430 PF00072 Response regulator receiver domain ISN35_17430 PF00672 HAMP domain ISN35_17430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_17430 PF01627 Hpt domain ISN35_17435 PF00072 Response regulator receiver domain ISN35_17440 PF02926 THUMP domain ISN35_17440 PF01170 Putative RNA methylase family UPF0020 ISN35_17440 PF10672 S-adenosylmethionine-dependent methyltransferase ISN35_17475 PF00581 Rhodanese-like domain ISN35_17480 PF00293 NUDIX domain ISN35_17485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISN35_17485 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISN35_17490 PF00378 Enoyl-CoA hydratase/isomerase ISN35_17500 PF10576 Iron-sulfur binding domain of endonuclease III ISN35_17500 PF00730 HhH-GPD superfamily base excision DNA repair protein ISN35_17500 PF00633 Helix-hairpin-helix motif ISN35_17505 PF01740 STAS domain ISN35_17505 PF00916 Sulfate permease family ISN35_17510 PF00484 Carbonic anhydrase ISN35_17520 PF07396 Phosphate-selective porin O and P ISN35_17525 PF12849 PBP superfamily domain ISN35_17530 PF12849 PBP superfamily domain ISN35_17535 PF00528 Binding-protein-dependent transport system inner membrane component ISN35_17540 PF00528 Binding-protein-dependent transport system inner membrane component ISN35_17545 PF00005 ABC transporter ISN35_17550 PF01895 PhoU domain ISN35_17560 PF05114 Protein of unknown function (DUF692) ISN35_17570 PF00929 Exonuclease ISN35_17590 PF00588 SpoU rRNA Methylase family ISN35_17590 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISN35_17600 PF00773 RNB domain ISN35_17600 PF08206 Ribonuclease B OB domain ISN35_17600 PF08461 Ribonuclease R winged-helix domain ISN35_17600 PF17876 Cold shock domain ISN35_17600 PF00575 S1 RNA binding domain ISN35_17610 PF06903 VirK protein ISN35_17635 PF07690 Major Facilitator Superfamily ISN35_17640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN35_17640 PF00529 HlyD membrane-fusion protein of T1SS ISN35_17645 PF02321 Outer membrane efflux protein ISN35_17660 PF00521 DNA gyrase/topoisomerase IV, subunit A ISN35_17660 PF03989 DNA gyrase C-terminal domain, beta-propeller ISN35_17665 PF00210 Ferritin-like domain ISN35_17670 PF01804 Penicillin amidase ISN35_17680 PF13537 Glutamine amidotransferase domain ISN35_17680 PF00733 Asparagine synthase ISN35_17690 PF01546 Peptidase family M20/M25/M40 ISN35_17690 PF07687 Peptidase dimerisation domain ISN35_17695 PF03960 ArsC family ISN35_17700 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ISN35_17700 PF14602 Hexapeptide repeat of succinyl-transferase ISN35_17700 PF00132 Bacterial transferase hexapeptide (six repeats) ISN35_17705 PF01909 Nucleotidyltransferase domain ISN35_17705 PF08335 GlnD PII-uridylyltransferase ISN35_17705 PF01966 HD domain ISN35_17710 PF00557 Metallopeptidase family M24 ISN35_17745 PF00318 Ribosomal protein S2 ISN35_17750 PF00889 Elongation factor TS ISN35_17755 PF00990 Diguanylate cyclase, GGDEF domain ISN35_17760 PF00696 Amino acid kinase family ISN35_17765 PF01765 Ribosome recycling factor ISN35_17770 PF01255 Putative undecaprenyl diphosphate synthase ISN35_17780 PF13288 DXP reductoisomerase C-terminal domain ISN35_17780 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ISN35_17780 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ISN35_17785 PF02163 Peptidase family M50 ISN35_17785 PF17820 PDZ domain ISN35_17790 PF01103 Surface antigen ISN35_17790 PF07244 Surface antigen variable number repeat ISN35_17795 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ISN35_17795 PF00132 Bacterial transferase hexapeptide (six repeats) ISN35_17800 PF07977 FabA-like domain ISN35_17805 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ISN35_17805 PF00132 Bacterial transferase hexapeptide (six repeats) ISN35_17810 PF02684 Lipid-A-disaccharide synthetase ISN35_17815 PF01351 Ribonuclease HII ISN35_17820 PF01336 OB-fold nucleic acid binding domain ISN35_17820 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ISN35_17820 PF14579 Helix-hairpin-helix motif ISN35_17820 PF07733 Bacterial DNA polymerase III alpha NTPase domain ISN35_17820 PF02811 PHP domain ISN35_17825 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ISN35_17835 PF03653 Uncharacterised protein family (UPF0093) ISN35_17900 PF03377 TAL effector repeat ISN35_17910 PF03377 TAL effector repeat ISN35_17925 PF00664 ABC transporter transmembrane region ISN35_17925 PF00005 ABC transporter ISN35_17940 PF00144 Beta-lactamase ISN35_17945 PF03737 Aldolase/RraA ISN35_17955 PF03812 2-keto-3-deoxygluconate permease ISN35_17965 PF00990 Diguanylate cyclase, GGDEF domain ISN35_17970 PF00849 RNA pseudouridylate synthase ISN35_17970 PF01479 S4 domain ISN35_17975 PF00270 DEAD/DEAH box helicase ISN35_17975 PF03880 DbpA RNA binding domain ISN35_17975 PF00271 Helicase conserved C-terminal domain ISN35_17995 PF01494 FAD binding domain ISN35_18030 PF00730 HhH-GPD superfamily base excision DNA repair protein ISN35_18030 PF12833 Helix-turn-helix domain ISN35_18030 PF02805 Metal binding domain of Ada ISN35_18030 PF06029 AlkA N-terminal domain ISN35_18035 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISN35_18035 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISN35_18045 PF00654 Voltage gated chloride channel ISN35_18050 PF08240 Alcohol dehydrogenase GroES-like domain ISN35_18050 PF00107 Zinc-binding dehydrogenase ISN35_18065 PF00593 TonB dependent receptor ISN35_18065 PF07715 TonB-dependent Receptor Plug Domain ISN35_18080 PF01799 [2Fe-2S] binding domain ISN35_18080 PF00111 2Fe-2S iron-sulfur cluster binding domain ISN35_18080 PF10518 TAT (twin-arginine translocation) pathway signal sequence ISN35_18085 PF00941 FAD binding domain in molybdopterin dehydrogenase ISN35_18085 PF03450 CO dehydrogenase flavoprotein C-terminal domain ISN35_18090 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ISN35_18090 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ISN35_18095 PF12804 MobA-like NTP transferase domain ISN35_18105 PF00561 alpha/beta hydrolase fold ISN35_18115 PF01483 Proprotein convertase P-domain ISN35_18115 PF00082 Subtilase family ISN35_18125 PF07690 Major Facilitator Superfamily ISN35_18130 PF01475 Ferric uptake regulator family ISN35_18135 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISN35_18170 PF00672 HAMP domain ISN35_18170 PF00512 His Kinase A (phospho-acceptor) domain ISN35_18170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_18180 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ISN35_18200 PF00271 Helicase conserved C-terminal domain ISN35_18200 PF03461 TRCF domain ISN35_18200 PF17757 UvrB interaction domain ISN35_18200 PF00270 DEAD/DEAH box helicase ISN35_18200 PF02559 CarD-like/TRCF domain ISN35_18210 PF01627 Hpt domain ISN35_18210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_18210 PF02895 Signal transducing histidine kinase, homodimeric domain ISN35_18210 PF01584 CheW-like domain ISN35_18215 PF02203 Tar ligand binding domain homologue ISN35_18215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_18215 PF00672 HAMP domain ISN35_18220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_18220 PF02203 Tar ligand binding domain homologue ISN35_18220 PF00672 HAMP domain ISN35_18225 PF12729 Four helix bundle sensory module for signal transduction ISN35_18225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_18225 PF00672 HAMP domain ISN35_18230 PF01584 CheW-like domain ISN35_18235 PF00563 EAL domain ISN35_18235 PF00990 Diguanylate cyclase, GGDEF domain ISN35_18235 PF03707 Bacterial signalling protein N terminal repeat ISN35_18240 PF01739 CheR methyltransferase, SAM binding domain ISN35_18240 PF03705 CheR methyltransferase, all-alpha domain ISN35_18245 PF01339 CheB methylesterase ISN35_18245 PF00072 Response regulator receiver domain ISN35_18255 PF13276 HTH-like domain ISN35_18255 PF00665 Integrase core domain ISN35_18255 PF13333 Integrase core domain ISN35_18260 PF02311 AraC-like ligand binding domain ISN35_18260 PF12833 Helix-turn-helix domain ISN35_18270 PF07944 Beta-L-arabinofuranosidase, GH127 ISN35_18280 PF00300 Histidine phosphatase superfamily (branch 1) ISN35_18290 PF04493 Endonuclease V ISN35_18305 PF02554 Carbon starvation protein CstA ISN35_18305 PF13722 5TM C-terminal transporter carbon starvation CstA ISN35_18310 PF04328 Selenoprotein, putative ISN35_18315 PF13419 Haloacid dehalogenase-like hydrolase ISN35_18340 PF07676 WD40-like Beta Propeller Repeat ISN35_18340 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ISN35_18340 PF00326 Prolyl oligopeptidase family ISN35_18345 PF03169 OPT oligopeptide transporter protein ISN35_18350 PF00854 POT family ISN35_18370 PF00436 Single-strand binding protein family ISN35_18375 PF00348 Polyprenyl synthetase ISN35_18385 PF08245 Mur ligase middle domain ISN35_18400 PF00696 Amino acid kinase family ISN35_18400 PF01842 ACT domain ISN35_18405 PF02567 Phenazine biosynthesis-like protein ISN35_18415 PF02566 OsmC-like protein ISN35_18430 PF01476 LysM domain ISN35_18430 PF08525 Opacity-associated protein A N-terminal motif ISN35_18430 PF01551 Peptidase family M23 ISN35_18445 PF01965 DJ-1/PfpI family ISN35_18460 PF01458 Uncharacterized protein family (UPF0051) ISN35_18465 PF00005 ABC transporter ISN35_18470 PF01458 Uncharacterized protein family (UPF0051) ISN35_18475 PF00266 Aminotransferase class-V ISN35_18485 PF00355 Rieske [2Fe-2S] domain ISN35_18490 PF00593 TonB dependent receptor ISN35_18490 PF07715 TonB-dependent Receptor Plug Domain ISN35_18495 PF13640 2OG-Fe(II) oxygenase superfamily ISN35_18495 PF18331 PKHD-type hydroxylase C-terminal domain ISN35_18515 PF02424 ApbE family ISN35_18520 PF00258 Flavodoxin ISN35_18520 PF00175 Oxidoreductase NAD-binding domain ISN35_18520 PF00667 FAD binding domain ISN35_18530 PF00072 Response regulator receiver domain ISN35_18530 PF00486 Transcriptional regulatory protein, C terminal ISN35_18555 PF01636 Phosphotransferase enzyme family ISN35_18560 PF00483 Nucleotidyl transferase ISN35_18565 PF00308 Bacterial dnaA protein ISN35_18570 PF01594 AI-2E family transporter ISN35_18580 PF00586 AIR synthase related protein, N-terminal domain ISN35_18580 PF02769 AIR synthase related protein, C-terminal domain ISN35_18595 PF00551 Formyl transferase ISN35_18625 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISN35_18635 PF01380 SIS domain ISN35_18635 PF00571 CBS domain ISN35_18655 PF00005 ABC transporter ISN35_18660 PF00309 Sigma-54 factor, Activator interacting domain (AID) ISN35_18660 PF04963 Sigma-54 factor, core binding domain ISN35_18660 PF04552 Sigma-54, DNA binding domain ISN35_18665 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ISN35_18670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISN35_18675 PF07475 HPr Serine kinase C-terminal domain ISN35_18675 PF02603 HPr Serine kinase N terminus ISN35_18680 PF03668 P-loop ATPase protein family ISN35_18690 PF00381 PTS HPr component phosphorylation site ISN35_18695 PF05524 PEP-utilising enzyme, N-terminal ISN35_18695 PF02896 PEP-utilising enzyme, TIM barrel domain ISN35_18695 PF00391 PEP-utilising enzyme, mobile domain ISN35_18700 PF00571 CBS domain ISN35_18700 PF01769 Divalent cation transporter ISN35_18700 PF03448 MgtE intracellular N domain ISN35_18715 PF03600 Citrate transporter ISN35_18720 PF00324 Amino acid permease ISN35_18730 PF02203 Tar ligand binding domain homologue ISN35_18730 PF00672 HAMP domain ISN35_18730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN35_18750 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISN35_18750 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISN35_18755 PF03652 Holliday junction resolvase ISN35_18760 PF02622 Uncharacterized ACR, COG1678 ISN35_18770 PF13302 Acetyltransferase (GNAT) domain ISN35_18770 PF13673 Acetyltransferase (GNAT) domain ISN35_18770 PF03352 Methyladenine glycosylase ISN35_18770 PF00117 Glutamine amidotransferase class-I ISN35_18770 PF00958 GMP synthase C terminal domain ISN35_18775 PF00437 Type II/IV secretion system protein ISN35_18780 PF00437 Type II/IV secretion system protein ISN35_18785 PF01168 Alanine racemase, N-terminal domain ISN35_18795 PF14748 Pyrroline-5-carboxylate reductase dimerisation ISN35_18795 PF03807 NADP oxidoreductase coenzyme F420-dependent ISN35_18805 PF09278 MerR, DNA binding ISN35_18805 PF00376 MerR family regulatory protein ISN35_18810 PF07690 Major Facilitator Superfamily ISN35_18820 PF00583 Acetyltransferase (GNAT) family ISN35_18825 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ISN35_18825 PF01243 Pyridoxamine 5'-phosphate oxidase ISN35_18830 PF01202 Shikimate kinase ISN35_18835 PF01761 3-dehydroquinate synthase ISN35_18840 PF02321 Outer membrane efflux protein ISN35_18845 PF00873 AcrB/AcrD/AcrF family ISN35_18850 PF13533 Biotin-lipoyl like ISN35_18860 PF01208 Uroporphyrinogen decarboxylase (URO-D) ISN35_18865 PF07690 Major Facilitator Superfamily ISN35_18870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_18870 PF01627 Hpt domain ISN35_18870 PF17149 Periplasmic sensor domain found in signal transduction proteins ISN35_18870 PF00672 HAMP domain ISN35_18870 PF00512 His Kinase A (phospho-acceptor) domain ISN35_18870 PF00072 Response regulator receiver domain ISN35_18875 PF00072 Response regulator receiver domain ISN35_18875 PF17149 Periplasmic sensor domain found in signal transduction proteins ISN35_18875 PF00512 His Kinase A (phospho-acceptor) domain ISN35_18875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN35_18875 PF00672 HAMP domain ISN35_18875 PF01627 Hpt domain ISN35_18885 PF01292 Prokaryotic cytochrome b561 ISN35_18900 PF03313 Serine dehydratase alpha chain ISN35_18900 PF03315 Serine dehydratase beta chain ISN35_18905 PF00990 Diguanylate cyclase, GGDEF domain ISN35_18915 PF03447 Homoserine dehydrogenase, NAD binding domain ISN35_18915 PF00742 Homoserine dehydrogenase ISN35_18915 PF00696 Amino acid kinase family ISN35_18920 PF01053 Cys/Met metabolism PLP-dependent enzyme ISN35_18925 PF00561 alpha/beta hydrolase fold ISN35_18935 PF00009 Elongation factor Tu GTP binding domain ISN35_18935 PF16658 Class II release factor RF3, C-terminal domain ISN35_18940 PF03006 Haemolysin-III related ISN35_18945 PF05170 AsmA family ISN35_18950 PF00571 CBS domain ISN35_18955 PF00535 Glycosyl transferase family 2 ISN35_18960 PF00912 Transglycosylase ISN35_18965 PF01430 Hsp33 protein ISN35_18975 PF07715 TonB-dependent Receptor Plug Domain ISN35_18975 PF00593 TonB dependent receptor ISN35_18985 PF00440 Bacterial regulatory proteins, tetR family ISN35_18995 PF09317 Domain of unknown function (DUF1974) ISN35_18995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISN35_18995 PF02770 Acyl-CoA dehydrogenase, middle domain ISN35_18995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISN35_19000 PF01070 FMN-dependent dehydrogenase ISN35_19015 PF00348 Polyprenyl synthetase ISN35_19020 PF00067 Cytochrome P450 ISN35_19035 PF00067 Cytochrome P450 ISN35_19040 PF00067 Cytochrome P450 ISN35_19045 PF00067 Cytochrome P450 ISN35_19060 PF05199 GMC oxidoreductase ISN35_19060 PF00732 GMC oxidoreductase ISN35_19090 PF01597 Glycine cleavage H-protein ISN35_19095 PF08669 Glycine cleavage T-protein C-terminal barrel domain ISN35_19095 PF01571 Aminomethyltransferase folate-binding domain ISN35_19110 PF01145 SPFH domain / Band 7 family ISN35_19110 PF16200 C-terminal region of band_7 ISN35_19120 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ISN35_19125 PF03819 MazG nucleotide pyrophosphohydrolase domain ISN35_19130 PF00459 Inositol monophosphatase family ISN35_19135 PF00293 NUDIX domain ISN35_19140 PF00202 Aminotransferase class-III ISN35_19145 PF04452 RNA methyltransferase ISN35_19155 PF02685 Glucokinase ISN35_19170 PF00704 Glycosyl hydrolases family 18 ISN35_19170 PF01476 LysM domain ISN35_19175 PF02838 Glycosyl hydrolase family 20, domain 2 ISN35_19175 PF00728 Glycosyl hydrolase family 20, catalytic domain ISN35_19175 PF07691 PA14 domain ISN35_19185 PF07691 PA14 domain ISN35_19185 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISN35_19185 PF00933 Glycosyl hydrolase family 3 N terminal domain ISN35_19185 PF14310 Fibronectin type III-like domain ISN35_19205 PF17678 Glycosyl hydrolase family 92 N-terminal domain ISN35_19205 PF07971 Glycosyl hydrolase family 92 ISN35_19215 PF01301 Glycosyl hydrolases family 35 ISN35_19290 PF04717 Type VI secretion system, phage-baseplate injector ISN35_19300 PF10431 C-terminal, D2-small domain, of ClpB protein ISN35_19300 PF07724 AAA domain (Cdc48 subfamily) ISN35_19300 PF00004 ATPase family associated with various cellular activities (AAA) ISN35_19300 PF17871 AAA lid domain ISN35_19310 PF05947 Type VI secretion system, TssF ISN35_19325 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISN35_19330 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISN35_19360 PF01476 LysM domain ISN35_19360 PF00877 NlpC/P60 family ISN35_19360 PF08239 Bacterial SH3 domain ISN35_19375 PF00182 Chitinase class I ISN35_19450 PF05360 yiaA/B two helix domain ISN35_19460 PF00691 OmpA family ISN35_19460 PF04972 BON domain ISN35_19470 PF06761 Intracellular multiplication and human macrophage-killing ISN35_19470 PF14331 ImcF-related N-terminal domain ISN35_19470 PF06744 Type VI secretion protein IcmF C-terminal ISN35_19515 PF14220 Domain of unknown function (DUF4329) ISN35_19515 PF03527 RHS protein ISN35_19515 PF05593 RHS Repeat ISN35_19525 PF04717 Type VI secretion system, phage-baseplate injector ISN35_19530 PF03377 TAL effector repeat ISN35_19540 PF03377 TAL effector repeat ISN35_19600 PF00994 Probable molybdopterin binding domain ISN35_19610 PF03976 Polyphosphate kinase 2 (PPK2)