locus-tag class description ISN38_00015 PF13861 FlgD Tudor-like domain ISN38_00015 PF13860 FlgD Ig-like domain ISN38_00015 PF03963 Flagellar hook capping protein - N-terminal region ISN38_00020 PF00460 Flagella basal body rod protein ISN38_00020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISN38_00030 PF00072 Response regulator receiver domain ISN38_00030 PF01584 CheW-like domain ISN38_00050 PF08448 PAS fold ISN38_00050 PF13188 PAS domain ISN38_00050 PF00072 Response regulator receiver domain ISN38_00050 PF00512 His Kinase A (phospho-acceptor) domain ISN38_00050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_00055 PF00563 EAL domain ISN38_00055 PF00990 Diguanylate cyclase, GGDEF domain ISN38_00055 PF03707 Bacterial signalling protein N terminal repeat ISN38_00060 PF07730 Histidine kinase ISN38_00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_00065 PF00563 EAL domain ISN38_00065 PF00990 Diguanylate cyclase, GGDEF domain ISN38_00065 PF03707 Bacterial signalling protein N terminal repeat ISN38_00075 PF00005 ABC transporter ISN38_00085 PF00672 HAMP domain ISN38_00085 PF12729 Four helix bundle sensory module for signal transduction ISN38_00085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_00090 PF04356 Protein of unknown function (DUF489) ISN38_00100 PF00293 NUDIX domain ISN38_00110 PF02617 ATP-dependent Clp protease adaptor protein ClpS ISN38_00115 PF07724 AAA domain (Cdc48 subfamily) ISN38_00115 PF00004 ATPase family associated with various cellular activities (AAA) ISN38_00115 PF17871 AAA lid domain ISN38_00115 PF10431 C-terminal, D2-small domain, of ClpB protein ISN38_00115 PF02861 Clp amino terminal domain, pathogenicity island component ISN38_00120 PF01176 Translation initiation factor 1A / IF-1 ISN38_00125 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ISN38_00135 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN38_00140 PF09397 Ftsk gamma domain ISN38_00140 PF17854 FtsK alpha domain ISN38_00140 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ISN38_00140 PF01580 FtsK/SpoIIIE family ISN38_00150 PF03548 Outer membrane lipoprotein carrier protein LolA ISN38_00160 PF16193 AAA C-terminal domain ISN38_00160 PF00004 ATPase family associated with various cellular activities (AAA) ISN38_00160 PF12002 MgsA AAA+ ATPase C terminal ISN38_00165 PF00654 Voltage gated chloride channel ISN38_00180 PF03918 Cytochrome C biogenesis protein ISN38_00185 PF08534 Redoxin ISN38_00190 PF01578 Cytochrome C assembly protein ISN38_00190 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ISN38_00195 PF03100 CcmE ISN38_00205 PF01578 Cytochrome C assembly protein ISN38_00210 PF00082 Subtilase family ISN38_00220 PF04542 Sigma-70 region 2 ISN38_00220 PF08281 Sigma-70, region 4 ISN38_00230 PF00034 Cytochrome c ISN38_00240 PF01292 Prokaryotic cytochrome b561 ISN38_00245 PF05523 WxcM-like, C-terminal ISN38_00265 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISN38_00270 PF01943 Polysaccharide biosynthesis protein ISN38_00275 PF00535 Glycosyl transferase family 2 ISN38_00310 PF00534 Glycosyl transferases group 1 ISN38_00310 PF13439 Glycosyltransferase Family 4 ISN38_00315 PF13579 Glycosyl transferase 4-like domain ISN38_00315 PF00534 Glycosyl transferases group 1 ISN38_00330 PF00155 Aminotransferase class I and II ISN38_00335 PF03473 MOSC domain ISN38_00335 PF03475 3-alpha domain ISN38_00340 PF05173 Dihydrodipicolinate reductase, C-terminus ISN38_00340 PF01113 Dihydrodipicolinate reductase, N-terminus ISN38_00345 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ISN38_00345 PF00117 Glutamine amidotransferase class-I ISN38_00355 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ISN38_00355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISN38_00355 PF02142 MGS-like domain ISN38_00360 PF03449 Transcription elongation factor, N-terminal ISN38_00360 PF01272 Transcription elongation factor, GreA/GreB, C-term ISN38_00370 PF17768 RecJ OB domain ISN38_00370 PF01368 DHH family ISN38_00370 PF02272 DHHA1 domain ISN38_00450 PF12705 PD-(D/E)XK nuclease superfamily ISN38_00450 PF00580 UvrD/REP helicase N-terminal domain ISN38_00450 PF13361 UvrD-like helicase C-terminal domain ISN38_00495 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain ISN38_00495 PF12706 Beta-lactamase superfamily domain ISN38_00500 PF12706 Beta-lactamase superfamily domain ISN38_00500 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain ISN38_00505 PF03621 MbtH-like protein ISN38_00510 PF00005 ABC transporter ISN38_00510 PF00664 ABC transporter transmembrane region ISN38_00515 PF00378 Enoyl-CoA hydratase/isomerase ISN38_00520 PF00155 Aminotransferase class I and II ISN38_00525 PF00378 Enoyl-CoA hydratase/isomerase ISN38_00535 PF02797 Chalcone and stilbene synthases, C-terminal domain ISN38_00535 PF00195 Chalcone and stilbene synthases, N-terminal domain ISN38_00540 PF00668 Condensation domain ISN38_00540 PF13193 AMP-binding enzyme C-terminal domain ISN38_00540 PF00550 Phosphopantetheine attachment site ISN38_00540 PF00501 AMP-binding enzyme ISN38_00540 PF00975 Thioesterase domain ISN38_00545 PF00550 Phosphopantetheine attachment site ISN38_00545 PF00975 Thioesterase domain ISN38_00545 PF00668 Condensation domain ISN38_00545 PF13193 AMP-binding enzyme C-terminal domain ISN38_00545 PF00501 AMP-binding enzyme ISN38_00550 PF00975 Thioesterase domain ISN38_00550 PF00501 AMP-binding enzyme ISN38_00550 PF13193 AMP-binding enzyme C-terminal domain ISN38_00550 PF00550 Phosphopantetheine attachment site ISN38_00550 PF00668 Condensation domain ISN38_00555 PF00550 Phosphopantetheine attachment site ISN38_00555 PF00668 Condensation domain ISN38_00555 PF13193 AMP-binding enzyme C-terminal domain ISN38_00555 PF00501 AMP-binding enzyme ISN38_00560 PF00668 Condensation domain ISN38_00560 PF13193 AMP-binding enzyme C-terminal domain ISN38_00560 PF00501 AMP-binding enzyme ISN38_00560 PF00550 Phosphopantetheine attachment site ISN38_00575 PF00155 Aminotransferase class I and II ISN38_00580 PF01070 FMN-dependent dehydrogenase ISN38_00585 PF00202 Aminotransferase class-III ISN38_00590 PF02638 Glycosyl hydrolase-like 10 ISN38_00620 PF00873 AcrB/AcrD/AcrF family ISN38_00655 PF09308 LuxQ, periplasmic ISN38_00655 PF00512 His Kinase A (phospho-acceptor) domain ISN38_00655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_00655 PF00072 Response regulator receiver domain ISN38_00660 PF16921 Tex protein YqgF-like domain ISN38_00660 PF09371 Tex-like protein N-terminal domain ISN38_00660 PF00575 S1 RNA binding domain ISN38_00660 PF17674 HHH domain ISN38_00665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_00665 PF00072 Response regulator receiver domain ISN38_00665 PF13426 PAS domain ISN38_00675 PF01266 FAD dependent oxidoreductase ISN38_00675 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ISN38_00695 PF00561 alpha/beta hydrolase fold ISN38_00705 PF01066 CDP-alcohol phosphatidyltransferase ISN38_00725 PF03618 Kinase/pyrophosphorylase ISN38_00730 PF02896 PEP-utilising enzyme, TIM barrel domain ISN38_00730 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ISN38_00730 PF00391 PEP-utilising enzyme, mobile domain ISN38_00735 PF00924 Mechanosensitive ion channel ISN38_00735 PF05552 Conserved TM helix ISN38_00740 PF00929 Exonuclease ISN38_00745 PF14437 MafB19-like deaminase ISN38_00750 PF02742 Iron dependent repressor, metal binding and dimerisation domain ISN38_00750 PF01325 Iron dependent repressor, N-terminal DNA binding domain ISN38_00755 PF01566 Natural resistance-associated macrophage protein ISN38_00760 PF00072 Response regulator receiver domain ISN38_00760 PF13188 PAS domain ISN38_00760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_00760 PF00512 His Kinase A (phospho-acceptor) domain ISN38_00760 PF08448 PAS fold ISN38_00765 PF06745 KaiC ISN38_00770 PF17137 Domain of unknown function (DUF5110) ISN38_00770 PF01055 Glycosyl hydrolases family 31 ISN38_00770 PF16338 Domain of unknown function (DUF4968) ISN38_00775 PF00958 GMP synthase C terminal domain ISN38_00775 PF00117 Glutamine amidotransferase class-I ISN38_00775 PF02540 NAD synthase ISN38_00780 PF00571 CBS domain ISN38_00780 PF00478 IMP dehydrogenase / GMP reductase domain ISN38_00785 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ISN38_00785 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ISN38_00805 PF02254 TrkA-N domain ISN38_00805 PF00999 Sodium/hydrogen exchanger family ISN38_00810 PF00899 ThiF family ISN38_00815 PF00994 Probable molybdopterin binding domain ISN38_00815 PF03454 MoeA C-terminal region (domain IV) ISN38_00815 PF03453 MoeA N-terminal region (domain I and II) ISN38_00820 PF12804 MobA-like NTP transferase domain ISN38_00825 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ISN38_00825 PF01926 50S ribosome-binding GTPase ISN38_00830 PF13360 PQQ-like domain ISN38_00830 PF01011 PQQ enzyme repeat ISN38_00840 PF13464 Domain of unknown function (DUF4115) ISN38_00850 PF04055 Radical SAM superfamily ISN38_00855 PF00334 Nucleoside diphosphate kinase ISN38_00865 PF00378 Enoyl-CoA hydratase/isomerase ISN38_00865 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISN38_00865 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISN38_00870 PF02803 Thiolase, C-terminal domain ISN38_00870 PF00108 Thiolase, N-terminal domain ISN38_00875 PF00483 Nucleotidyl transferase ISN38_00880 PF02719 Polysaccharide biosynthesis protein ISN38_00885 PF00953 Glycosyl transferase family 4 ISN38_00890 PF18073 Rubredoxin metal binding domain ISN38_00900 PF00216 Bacterial DNA-binding protein ISN38_00905 PF00575 S1 RNA binding domain ISN38_00910 PF02224 Cytidylate kinase ISN38_00915 PF00444 Ribosomal protein L36 ISN38_00925 PF04371 Porphyromonas-type peptidyl-arginine deiminase ISN38_00930 PF00795 Carbon-nitrogen hydrolase ISN38_00940 PF00873 AcrB/AcrD/AcrF family ISN38_00950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN38_00950 PF00529 HlyD membrane-fusion protein of T1SS ISN38_00955 PF00034 Cytochrome c ISN38_00960 PF00034 Cytochrome c ISN38_00970 PF01106 NifU-like domain ISN38_00975 PF01329 Pterin 4 alpha carbinolamine dehydratase ISN38_00985 PF02535 ZIP Zinc transporter ISN38_00995 PF01479 S4 domain ISN38_00995 PF00849 RNA pseudouridylate synthase ISN38_01000 PF00575 S1 RNA binding domain ISN38_01000 PF10150 Ribonuclease E/G family ISN38_01000 PF12111 Polyribonucleotide phosphorylase C terminal ISN38_01010 PF00196 Bacterial regulatory proteins, luxR family ISN38_01010 PF00072 Response regulator receiver domain ISN38_01025 PF00664 ABC transporter transmembrane region ISN38_01025 PF00005 ABC transporter ISN38_01065 PF00550 Phosphopantetheine attachment site ISN38_01070 PF02801 Beta-ketoacyl synthase, C-terminal domain ISN38_01070 PF00109 Beta-ketoacyl synthase, N-terminal domain ISN38_01075 PF00202 Aminotransferase class-III ISN38_01115 PF01066 CDP-alcohol phosphatidyltransferase ISN38_01120 PF08459 UvrC Helix-hairpin-helix N-terminal ISN38_01120 PF02151 UvrB/uvrC motif ISN38_01120 PF01541 GIY-YIG catalytic domain ISN38_01130 PF01451 Low molecular weight phosphotyrosine protein phosphatase ISN38_01135 PF02348 Cytidylyltransferase ISN38_01140 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ISN38_01145 PF00664 ABC transporter transmembrane region ISN38_01145 PF00005 ABC transporter ISN38_01155 PF01618 MotA/TolQ/ExbB proton channel family ISN38_01160 PF00753 Metallo-beta-lactamase superfamily ISN38_01160 PF03772 Competence protein ISN38_01170 PF00005 ABC transporter ISN38_01175 PF02687 FtsX-like permease family ISN38_01175 PF12704 MacB-like periplasmic core domain ISN38_01185 PF03937 Flavinator of succinate dehydrogenase ISN38_01190 PF13085 2Fe-2S iron-sulfur cluster binding domain ISN38_01195 PF00890 FAD binding domain ISN38_01195 PF02910 Fumarate reductase flavoprotein C-term ISN38_01200 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISN38_01205 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISN38_01215 PF01571 Aminomethyltransferase folate-binding domain ISN38_01220 PF00005 ABC transporter ISN38_01220 PF17912 MalK OB fold domain ISN38_01225 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ISN38_01225 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ISN38_01230 PF02685 Glucokinase ISN38_01235 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ISN38_01240 PF00920 Dehydratase family ISN38_01245 PF01081 KDPG and KHG aldolase ISN38_01255 PF00528 Binding-protein-dependent transport system inner membrane component ISN38_01260 PF00528 Binding-protein-dependent transport system inner membrane component ISN38_01280 PF00356 Bacterial regulatory proteins, lacI family ISN38_01290 PF03795 YCII-related domain ISN38_01295 PF02616 Segregation and condensation protein ScpA ISN38_01300 PF04079 Segregation and condensation complex subunit ScpB ISN38_01305 PF00849 RNA pseudouridylate synthase ISN38_01305 PF01479 S4 domain ISN38_01315 PF01527 Transposase ISN38_01320 PF13333 Integrase core domain ISN38_01320 PF00665 Integrase core domain ISN38_01320 PF13276 HTH-like domain ISN38_01340 PF00795 Carbon-nitrogen hydrolase ISN38_01345 PF00155 Aminotransferase class I and II ISN38_01350 PF00005 ABC transporter ISN38_01355 PF03379 CcmB protein ISN38_01360 PF01578 Cytochrome C assembly protein ISN38_01370 PF03100 CcmE ISN38_01375 PF01578 Cytochrome C assembly protein ISN38_01375 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ISN38_01380 PF08534 Redoxin ISN38_01385 PF03918 Cytochrome C biogenesis protein ISN38_01395 PF00561 alpha/beta hydrolase fold ISN38_01400 PF00664 ABC transporter transmembrane region ISN38_01400 PF00005 ABC transporter ISN38_01405 PF00005 ABC transporter ISN38_01405 PF00664 ABC transporter transmembrane region ISN38_01410 PF01654 Cytochrome bd terminal oxidase subunit I ISN38_01415 PF02322 Cytochrome bd terminal oxidase subunit II ISN38_01440 PF05088 Bacterial NAD-glutamate dehydrogenase ISN38_01450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN38_01450 PF00529 HlyD membrane-fusion protein of T1SS ISN38_01455 PF00873 AcrB/AcrD/AcrF family ISN38_01470 PF00271 Helicase conserved C-terminal domain ISN38_01470 PF04851 Type III restriction enzyme, res subunit ISN38_01470 PF02151 UvrB/uvrC motif ISN38_01470 PF12344 Ultra-violet resistance protein B ISN38_01470 PF17757 UvrB interaction domain ISN38_01475 PF07963 Prokaryotic N-terminal methylation motif ISN38_01475 PF00114 Pilin (bacterial filament) ISN38_01515 PF01555 DNA methylase ISN38_01525 PF03377 TAL effector repeat ISN38_01540 PF05598 Transposase domain (DUF772) ISN38_01540 PF01609 Transposase DDE domain ISN38_01545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISN38_01545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISN38_01545 PF02770 Acyl-CoA dehydrogenase, middle domain ISN38_01550 PF01209 ubiE/COQ5 methyltransferase family ISN38_01555 PF00809 Pterin binding enzyme ISN38_01555 PF02574 Homocysteine S-methyltransferase ISN38_01560 PF02574 Homocysteine S-methyltransferase ISN38_01560 PF00809 Pterin binding enzyme ISN38_01560 PF02965 Vitamin B12 dependent methionine synthase, activation domain ISN38_01560 PF02607 B12 binding domain ISN38_01560 PF02310 B12 binding domain ISN38_01570 PF01757 Acyltransferase family ISN38_01580 PF04102 SlyX ISN38_01585 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISN38_01585 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISN38_01585 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISN38_01590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISN38_01590 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISN38_01595 PF00255 Glutathione peroxidase ISN38_01605 PF00392 Bacterial regulatory proteins, gntR family ISN38_01610 PF00005 ABC transporter ISN38_01635 PF00206 Lyase ISN38_01635 PF10415 Fumarase C C-terminus ISN38_01645 PF00206 Lyase ISN38_01645 PF08328 Adenylosuccinate lyase C-terminal ISN38_01655 PF00223 Photosystem I psaA/psaB protein ISN38_01655 PF00691 OmpA family ISN38_01660 PF08007 Cupin superfamily protein ISN38_01670 PF02779 Transketolase, pyrimidine binding domain ISN38_01670 PF00676 Dehydrogenase E1 component ISN38_01670 PF16078 2-oxoglutarate dehydrogenase N-terminus ISN38_01670 PF16870 2-oxoglutarate dehydrogenase C-terminal ISN38_01675 PF02817 e3 binding domain ISN38_01675 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISN38_01675 PF00364 Biotin-requiring enzyme ISN38_01680 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN38_01680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISN38_01685 PF03641 Possible lysine decarboxylase ISN38_01690 PF03707 Bacterial signalling protein N terminal repeat ISN38_01690 PF00990 Diguanylate cyclase, GGDEF domain ISN38_01690 PF00563 EAL domain ISN38_01695 PF04542 Sigma-70 region 2 ISN38_01695 PF08281 Sigma-70, region 4 ISN38_01705 PF01205 Uncharacterized protein family UPF0029 ISN38_01710 PF00664 ABC transporter transmembrane region ISN38_01710 PF00005 ABC transporter ISN38_01720 PF02153 Prephenate dehydrogenase ISN38_01720 PF01817 Chorismate mutase type II ISN38_01725 PF08543 Phosphomethylpyrimidine kinase ISN38_01730 PF01556 DnaJ C terminal domain ISN38_01730 PF00684 DnaJ central domain ISN38_01730 PF00226 DnaJ domain ISN38_01735 PF00012 Hsp70 protein ISN38_01740 PF01025 GrpE ISN38_01745 PF01628 HrcA protein C terminal domain ISN38_01745 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ISN38_01750 PF02463 RecF/RecN/SMC N terminal domain ISN38_01755 PF01475 Ferric uptake regulator family ISN38_01760 PF04355 SmpA / OmlA family ISN38_01765 PF03658 RnfH family Ubiquitin ISN38_01770 PF03364 Polyketide cyclase / dehydrase and lipid transport ISN38_01775 PF01668 SmpB protein ISN38_01780 PF00082 Subtilase family ISN38_01800 PF02321 Outer membrane efflux protein ISN38_01805 PF00106 short chain dehydrogenase ISN38_01810 PF00873 AcrB/AcrD/AcrF family ISN38_01815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN38_01815 PF00529 HlyD membrane-fusion protein of T1SS ISN38_01830 PF03466 LysR substrate binding domain ISN38_01830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN38_01835 PF05736 OprF membrane domain ISN38_01835 PF00691 OmpA family ISN38_01840 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain ISN38_01840 PF06974 Protein of unknown function (DUF1298) ISN38_01845 PF03441 FAD binding domain of DNA photolyase ISN38_01845 PF00875 DNA photolyase ISN38_01850 PF03796 DnaB-like helicase C terminal domain ISN38_01850 PF00772 DnaB-like helicase N terminal domain ISN38_01855 PF03358 NADPH-dependent FMN reductase ISN38_01860 PF02770 Acyl-CoA dehydrogenase, middle domain ISN38_01860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISN38_01860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISN38_01875 PF01026 TatD related DNase ISN38_01880 PF00899 ThiF family ISN38_01895 PF00313 'Cold-shock' DNA-binding domain ISN38_01905 PF02253 Phospholipase A1 ISN38_01920 PF05683 Fumarase C-terminus ISN38_01920 PF05681 Fumarate hydratase (Fumerase) ISN38_01925 PF08281 Sigma-70, region 4 ISN38_01925 PF04542 Sigma-70 region 2 ISN38_01930 PF02627 Carboxymuconolactone decarboxylase family ISN38_01940 PF00005 ABC transporter ISN38_01950 PF00175 Oxidoreductase NAD-binding domain ISN38_01950 PF00970 Oxidoreductase FAD-binding domain ISN38_01955 PF00255 Glutathione peroxidase ISN38_01970 PF01047 MarR family ISN38_02000 PF00854 POT family ISN38_02010 PF14310 Fibronectin type III-like domain ISN38_02010 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISN38_02010 PF00933 Glycosyl hydrolase family 3 N terminal domain ISN38_02020 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISN38_02020 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISN38_02025 PF00545 ribonuclease ISN38_02035 PF12848 ABC transporter ISN38_02035 PF00005 ABC transporter ISN38_02035 PF16326 ABC transporter C-terminal domain ISN38_02040 PF00270 DEAD/DEAH box helicase ISN38_02040 PF03880 DbpA RNA binding domain ISN38_02040 PF00271 Helicase conserved C-terminal domain ISN38_02045 PF00156 Phosphoribosyl transferase domain ISN38_02050 PF00873 AcrB/AcrD/AcrF family ISN38_02055 PF00529 HlyD membrane-fusion protein of T1SS ISN38_02055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN38_02065 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ISN38_02070 PF07859 alpha/beta hydrolase fold ISN38_02075 PF02798 Glutathione S-transferase, N-terminal domain ISN38_02075 PF00043 Glutathione S-transferase, C-terminal domain ISN38_02080 PF00313 'Cold-shock' DNA-binding domain ISN38_02085 PF00849 RNA pseudouridylate synthase ISN38_02090 PF07152 YaeQ protein ISN38_02100 PF00563 EAL domain ISN38_02100 PF00990 Diguanylate cyclase, GGDEF domain ISN38_02100 PF00072 Response regulator receiver domain ISN38_02105 PF01435 Peptidase family M48 ISN38_02110 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISN38_02115 PF00106 short chain dehydrogenase ISN38_02120 PF07879 PHB/PHA accumulation regulator DNA-binding domain ISN38_02120 PF05233 PHB accumulation regulatory domain ISN38_02135 PF08676 MutL C terminal dimerisation domain ISN38_02135 PF01119 DNA mismatch repair protein, C-terminal domain ISN38_02140 PF11741 AMIN domain ISN38_02140 PF01520 N-acetylmuramoyl-L-alanine amidase ISN38_02145 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ISN38_02150 PF03853 YjeF-related protein N-terminus ISN38_02150 PF01256 Carbohydrate kinase ISN38_02155 PF08331 Domain of unknown function (DUF1730) ISN38_02160 PF02601 Exonuclease VII, large subunit ISN38_02160 PF13742 OB-fold nucleic acid binding domain ISN38_02200 PF12806 Acetyl-CoA dehydrogenase C-terminal like ISN38_02200 PF02770 Acyl-CoA dehydrogenase, middle domain ISN38_02200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISN38_02200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISN38_02210 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ISN38_02210 PF02779 Transketolase, pyrimidine binding domain ISN38_02210 PF02780 Transketolase, C-terminal domain ISN38_02220 PF03808 Glycosyl transferase WecB/TagA/CpsF family ISN38_02235 PF14667 Polysaccharide biosynthesis C-terminal domain ISN38_02245 PF13439 Glycosyltransferase Family 4 ISN38_02245 PF00534 Glycosyl transferases group 1 ISN38_02260 PF02397 Bacterial sugar transferase ISN38_02280 PF13411 MerR HTH family regulatory protein ISN38_02285 PF00216 Bacterial DNA-binding protein ISN38_02290 PF03484 tRNA synthetase B5 domain ISN38_02290 PF01588 Putative tRNA binding domain ISN38_02290 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ISN38_02290 PF03147 Ferredoxin-fold anticodon binding domain ISN38_02290 PF03483 B3/4 domain ISN38_02295 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ISN38_02295 PF01409 tRNA synthetases class II core domain (F) ISN38_02300 PF00453 Ribosomal protein L20 ISN38_02305 PF01632 Ribosomal protein L35 ISN38_02310 PF00707 Translation initiation factor IF-3, C-terminal domain ISN38_02310 PF05198 Translation initiation factor IF-3, N-terminal domain ISN38_02315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISN38_02315 PF03129 Anticodon binding domain ISN38_02315 PF02824 TGS domain ISN38_02315 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISN38_02330 PF02421 Ferrous iron transport protein B ISN38_02330 PF07670 Nucleoside recognition ISN38_02330 PF07664 Ferrous iron transport protein B C terminus ISN38_02340 PF00378 Enoyl-CoA hydratase/isomerase ISN38_02345 PF00682 HMGL-like ISN38_02350 PF00106 short chain dehydrogenase ISN38_02355 PF08207 Elongation factor P (EF-P) KOW-like domain ISN38_02355 PF01132 Elongation factor P (EF-P) OB domain ISN38_02355 PF09285 Elongation factor P, C-terminal ISN38_02375 PF01565 FAD binding domain ISN38_02375 PF02913 FAD linked oxidases, C-terminal domain ISN38_02380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISN38_02380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISN38_02395 PF13520 Amino acid permease ISN38_02400 PF13520 Amino acid permease ISN38_02405 PF00596 Class II Aldolase and Adducin N-terminal domain ISN38_02410 PF03079 ARD/ARD' family ISN38_02430 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ISN38_02430 PF01502 Phosphoribosyl-AMP cyclohydrolase ISN38_02435 PF00977 Histidine biosynthesis protein ISN38_02440 PF00977 Histidine biosynthesis protein ISN38_02445 PF00117 Glutamine amidotransferase class-I ISN38_02450 PF00475 Imidazoleglycerol-phosphate dehydratase ISN38_02455 PF00155 Aminotransferase class I and II ISN38_02460 PF00815 Histidinol dehydrogenase ISN38_02465 PF08029 HisG, C-terminal domain ISN38_02465 PF01634 ATP phosphoribosyltransferase ISN38_02475 PF13393 Histidyl-tRNA synthetase ISN38_02475 PF03129 Anticodon binding domain ISN38_02480 PF13545 Crp-like helix-turn-helix domain ISN38_02480 PF00027 Cyclic nucleotide-binding domain ISN38_02490 PF14821 Threonine synthase N terminus ISN38_02490 PF00291 Pyridoxal-phosphate dependent enzyme ISN38_02495 PF07519 Tannase and feruloyl esterase ISN38_02500 PF13406 Transglycosylase SLT domain ISN38_02505 PF08544 GHMP kinases C terminal ISN38_02505 PF00288 GHMP kinases N terminal domain ISN38_02510 PF13840 ACT domain ISN38_02510 PF03447 Homoserine dehydrogenase, NAD binding domain ISN38_02510 PF00696 Amino acid kinase family ISN38_02510 PF00742 Homoserine dehydrogenase ISN38_02510 PF01842 ACT domain ISN38_02525 PF00171 Aldehyde dehydrogenase family ISN38_02540 PF01180 Dihydroorotate dehydrogenase ISN38_02545 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ISN38_02545 PF01565 FAD binding domain ISN38_02570 PF01569 PAP2 superfamily ISN38_02575 PF04551 GcpE protein ISN38_02585 PF00072 Response regulator receiver domain ISN38_02585 PF02954 Bacterial regulatory protein, Fis family ISN38_02590 PF00563 EAL domain ISN38_02590 PF00990 Diguanylate cyclase, GGDEF domain ISN38_02590 PF03707 Bacterial signalling protein N terminal repeat ISN38_02595 PF00474 Sodium:solute symporter family ISN38_02600 PF14310 Fibronectin type III-like domain ISN38_02600 PF00933 Glycosyl hydrolase family 3 N terminal domain ISN38_02600 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISN38_02605 PF06715 Gp5 C-terminal repeat (3 copies) ISN38_02605 PF04717 Type VI secretion system, phage-baseplate injector ISN38_02685 PF00342 Phosphoglucose isomerase ISN38_02690 PF02261 Aspartate decarboxylase ISN38_02695 PF02569 Pantoate-beta-alanine ligase ISN38_02700 PF02548 Ketopantoate hydroxymethyltransferase ISN38_02705 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ISN38_02710 PF12626 Polymerase A arginine-rich C-terminus ISN38_02710 PF01743 Poly A polymerase head domain ISN38_02710 PF12627 Probable RNA and SrmB- binding site of polymerase A ISN38_02720 PF00132 Bacterial transferase hexapeptide (six repeats) ISN38_02725 PF02649 Type I GTP cyclohydrolase folE2 ISN38_02730 PF11741 AMIN domain ISN38_02730 PF01520 N-acetylmuramoyl-L-alanine amidase ISN38_02735 PF00083 Sugar (and other) transporter ISN38_02745 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISN38_02745 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISN38_02760 PF13276 HTH-like domain ISN38_02760 PF13683 Integrase core domain ISN38_02765 PF00171 Aldehyde dehydrogenase family ISN38_02770 PF01472 PUA domain ISN38_02770 PF00696 Amino acid kinase family ISN38_02785 PF00206 Lyase ISN38_02790 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISN38_02800 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase ISN38_02800 PF00696 Amino acid kinase family ISN38_02805 PF01546 Peptidase family M20/M25/M40 ISN38_02805 PF07687 Peptidase dimerisation domain ISN38_02810 PF00764 Arginosuccinate synthase ISN38_02815 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISN38_02815 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISN38_02825 PF01406 tRNA synthetases class I (C) catalytic domain ISN38_02825 PF09190 DALR domain ISN38_02830 PF02657 Fe-S metabolism associated domain ISN38_02840 PF00561 alpha/beta hydrolase fold ISN38_02845 PF00529 HlyD membrane-fusion protein of T1SS ISN38_02850 PF00005 ABC transporter ISN38_02850 PF03412 Peptidase C39 family ISN38_02850 PF00664 ABC transporter transmembrane region ISN38_02865 PF01011 PQQ enzyme repeat ISN38_02865 PF13360 PQQ-like domain ISN38_02890 PF01258 Prokaryotic dksA/traR C4-type zinc finger ISN38_02895 PF01809 Putative membrane protein insertion efficiency factor ISN38_02900 PF01979 Amidohydrolase family ISN38_02905 PF08460 Bacterial SH3 domain ISN38_02905 PF01551 Peptidase family M23 ISN38_02910 PF01095 Pectinesterase ISN38_02915 PF00295 Glycosyl hydrolases family 28 ISN38_02920 PF01095 Pectinesterase ISN38_02930 PF13419 Haloacid dehalogenase-like hydrolase ISN38_02940 PF01979 Amidohydrolase family ISN38_02945 PF06736 Protein of unknown function (DUF1211) ISN38_02950 PF01132 Elongation factor P (EF-P) OB domain ISN38_02950 PF08207 Elongation factor P (EF-P) KOW-like domain ISN38_02950 PF09285 Elongation factor P, C-terminal ISN38_02955 PF04055 Radical SAM superfamily ISN38_02960 PF01590 GAF domain ISN38_02960 PF00360 Phytochrome region ISN38_02960 PF00563 EAL domain ISN38_02960 PF00990 Diguanylate cyclase, GGDEF domain ISN38_02970 PF00588 SpoU rRNA Methylase family ISN38_02975 PF00459 Inositol monophosphatase family ISN38_02980 PF07549 SecD/SecF GG Motif ISN38_02980 PF02355 Protein export membrane protein ISN38_02985 PF13721 SecD export protein N-terminal TM region ISN38_02985 PF07549 SecD/SecF GG Motif ISN38_02985 PF02355 Protein export membrane protein ISN38_02990 PF02699 Preprotein translocase subunit ISN38_02995 PF01702 Queuine tRNA-ribosyltransferase ISN38_03000 PF02547 Queuosine biosynthesis protein ISN38_03010 PF00202 Aminotransferase class-III ISN38_03025 PF00759 Glycosyl hydrolase family 9 ISN38_03025 PF02927 Cellulase N-terminal ig-like domain ISN38_03030 PF00753 Metallo-beta-lactamase superfamily ISN38_03040 PF00037 4Fe-4S binding domain ISN38_03050 PF01467 Cytidylyltransferase-like ISN38_03060 PF00183 Hsp90 protein ISN38_03060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_03065 PF02615 Malate/L-lactate dehydrogenase ISN38_03070 PF07715 TonB-dependent Receptor Plug Domain ISN38_03070 PF00593 TonB dependent receptor ISN38_03080 PF00593 TonB dependent receptor ISN38_03080 PF07715 TonB-dependent Receptor Plug Domain ISN38_03090 PF04616 Glycosyl hydrolases family 43 ISN38_03095 PF07532 Bacterial Ig-like domain (group 4) ISN38_03100 PF07715 TonB-dependent Receptor Plug Domain ISN38_03100 PF00593 TonB dependent receptor ISN38_03125 PF13520 Amino acid permease ISN38_03140 PF00557 Metallopeptidase family M24 ISN38_03140 PF01321 Creatinase/Prolidase N-terminal domain ISN38_03145 PF00171 Aldehyde dehydrogenase family ISN38_03150 PF00701 Dihydrodipicolinate synthetase family ISN38_03155 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN38_03155 PF17806 Sarcosine oxidase A3 domain ISN38_03165 PF01266 FAD dependent oxidoreductase ISN38_03170 PF05544 Proline racemase ISN38_03180 PF02881 SRP54-type protein, helical bundle domain ISN38_03180 PF00448 SRP54-type protein, GTPase domain ISN38_03185 PF00730 HhH-GPD superfamily base excision DNA repair protein ISN38_03185 PF00633 Helix-hairpin-helix motif ISN38_03185 PF14815 NUDIX domain ISN38_03185 PF10576 Iron-sulfur binding domain of endonuclease III ISN38_03190 PF04362 Bacterial Fe(2+) trafficking ISN38_03210 PF00570 HRDC domain ISN38_03210 PF01612 3'-5' exonuclease ISN38_03230 PF01584 CheW-like domain ISN38_03235 PF02203 Tar ligand binding domain homologue ISN38_03235 PF00672 HAMP domain ISN38_03235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_03240 PF00672 HAMP domain ISN38_03240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_03240 PF02743 Cache domain ISN38_03260 PF00563 EAL domain ISN38_03260 PF13188 PAS domain ISN38_03260 PF03707 Bacterial signalling protein N terminal repeat ISN38_03260 PF00990 Diguanylate cyclase, GGDEF domain ISN38_03265 PF00013 KH domain ISN38_03265 PF00575 S1 RNA binding domain ISN38_03265 PF03725 3' exoribonuclease family, domain 2 ISN38_03265 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ISN38_03265 PF01138 3' exoribonuclease family, domain 1 ISN38_03270 PF00312 Ribosomal protein S15 ISN38_03275 PF09157 Pseudouridine synthase II TruB, C-terminal ISN38_03275 PF16198 tRNA pseudouridylate synthase B C-terminal domain ISN38_03275 PF01509 TruB family pseudouridylate synthase (N terminal domain) ISN38_03280 PF02033 Ribosome-binding factor A ISN38_03285 PF11987 Translation-initiation factor 2 ISN38_03285 PF04760 Translation initiation factor IF-2, N-terminal region ISN38_03285 PF08364 Bacterial translation initiation factor IF-2 associated region ISN38_03285 PF00009 Elongation factor Tu GTP binding domain ISN38_03290 PF00575 S1 RNA binding domain ISN38_03290 PF13184 NusA-like KH domain ISN38_03290 PF08529 NusA N-terminal domain ISN38_03295 PF02576 RimP N-terminal domain ISN38_03295 PF17384 RimP C-terminal SH3 domain ISN38_03305 PF00361 Proton-conducting membrane transporter ISN38_03310 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ISN38_03310 PF00361 Proton-conducting membrane transporter ISN38_03315 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ISN38_03315 PF00361 Proton-conducting membrane transporter ISN38_03320 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ISN38_03325 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ISN38_03330 PF12838 4Fe-4S dicluster domain ISN38_03335 PF00146 NADH dehydrogenase ISN38_03340 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ISN38_03340 PF00384 Molybdopterin oxidoreductase ISN38_03340 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ISN38_03345 PF10531 SLBB domain ISN38_03345 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ISN38_03345 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISN38_03355 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ISN38_03360 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ISN38_03365 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ISN38_03370 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ISN38_03385 PF00121 Triosephosphate isomerase ISN38_03400 PF01965 DJ-1/PfpI family ISN38_03410 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISN38_03410 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISN38_03410 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISN38_03410 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISN38_03415 PF17848 Acetyl-coA carboxylase zinc finger domain ISN38_03415 PF01039 Carboxyl transferase domain ISN38_03420 PF00290 Tryptophan synthase alpha chain ISN38_03430 PF00291 Pyridoxal-phosphate dependent enzyme ISN38_03435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN38_03435 PF03466 LysR substrate binding domain ISN38_03440 PF05816 Toxic anion resistance protein (TelA) ISN38_03445 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ISN38_03450 PF01416 tRNA pseudouridine synthase ISN38_03460 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISN38_03460 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISN38_03465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISN38_03465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISN38_03470 PF01264 Chorismate synthase ISN38_03475 PF05175 Methyltransferase small domain ISN38_03480 PF02630 SCO1/SenC ISN38_03485 PF02666 Phosphatidylserine decarboxylase ISN38_03490 PF06737 Transglycosylase-like domain ISN38_03495 PF05872 Bacterial protein of unknown function (DUF853) ISN38_03500 PF00293 NUDIX domain ISN38_03515 PF01272 Transcription elongation factor, GreA/GreB, C-term ISN38_03515 PF03449 Transcription elongation factor, N-terminal ISN38_03520 PF01738 Dienelactone hydrolase family ISN38_03535 PF06271 RDD family ISN38_03540 PF00692 dUTPase ISN38_03545 PF10609 NUBPL iron-transfer P-loop NTPase ISN38_03565 PF00593 TonB dependent receptor ISN38_03565 PF07715 TonB-dependent Receptor Plug Domain ISN38_03570 PF00593 TonB dependent receptor ISN38_03570 PF07715 TonB-dependent Receptor Plug Domain ISN38_03575 PF13181 Tetratricopeptide repeat ISN38_03590 PF01431 Peptidase family M13 ISN38_03590 PF05649 Peptidase family M13 ISN38_03625 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA ISN38_03630 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA ISN38_03635 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN38_03635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISN38_03640 PF01266 FAD dependent oxidoreductase ISN38_03645 PF04235 Protein of unknown function (DUF418) ISN38_03650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISN38_03655 PF00877 NlpC/P60 family ISN38_03660 PF00877 NlpC/P60 family ISN38_03675 PF03061 Thioesterase superfamily ISN38_03685 PF00375 Sodium:dicarboxylate symporter family ISN38_03690 PF00245 Alkaline phosphatase ISN38_03700 PF11734 TilS substrate C-terminal domain ISN38_03700 PF09179 TilS substrate binding domain ISN38_03700 PF01171 PP-loop family ISN38_03705 PF02609 Exonuclease VII small subunit ISN38_03710 PF00348 Polyprenyl synthetase ISN38_03715 PF00486 Transcriptional regulatory protein, C terminal ISN38_03715 PF00072 Response regulator receiver domain ISN38_03720 PF00034 Cytochrome c ISN38_03720 PF03150 Di-haem cytochrome c peroxidase ISN38_03725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_03725 PF00512 His Kinase A (phospho-acceptor) domain ISN38_03725 PF08448 PAS fold ISN38_03725 PF13188 PAS domain ISN38_03725 PF00072 Response regulator receiver domain ISN38_03730 PF03466 LysR substrate binding domain ISN38_03730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN38_03735 PF06812 ImpA, N-terminal, type VI secretion system ISN38_03745 PF00069 Protein kinase domain ISN38_03745 PF03793 PASTA domain ISN38_03760 PF06744 Type VI secretion protein IcmF C-terminal ISN38_03760 PF14331 ImcF-related N-terminal domain ISN38_03760 PF06761 Intracellular multiplication and human macrophage-killing ISN38_03770 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISN38_03785 PF04717 Type VI secretion system, phage-baseplate injector ISN38_03785 PF06715 Gp5 C-terminal repeat (3 copies) ISN38_03795 PF00004 ATPase family associated with various cellular activities (AAA) ISN38_03795 PF07724 AAA domain (Cdc48 subfamily) ISN38_03795 PF17871 AAA lid domain ISN38_03795 PF10431 C-terminal, D2-small domain, of ClpB protein ISN38_03805 PF05947 Type VI secretion system, TssF ISN38_03810 PF04965 Gene 25-like lysozyme ISN38_03815 PF07024 ImpE protein ISN38_03820 PF05638 Type VI secretion system effector, Hcp ISN38_03825 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISN38_03830 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISN38_03840 PF01523 Putative modulator of DNA gyrase ISN38_03845 PF04751 Protein of unknown function (DUF615) ISN38_03850 PF01523 Putative modulator of DNA gyrase ISN38_03860 PF10150 Ribonuclease E/G family ISN38_03860 PF00575 S1 RNA binding domain ISN38_03865 PF02545 Maf-like protein ISN38_03870 PF04402 Protein of unknown function (DUF541) ISN38_03880 PF07715 TonB-dependent Receptor Plug Domain ISN38_03880 PF00593 TonB dependent receptor ISN38_03885 PF02590 Predicted SPOUT methyltransferase ISN38_03900 PF01467 Cytidylyltransferase-like ISN38_03915 PF13603 Leucyl-tRNA synthetase, Domain 2 ISN38_03915 PF08264 Anticodon-binding domain of tRNA ISN38_03915 PF00133 tRNA synthetases class I (I, L, M and V) ISN38_03925 PF00085 Thioredoxin ISN38_03945 PF02592 Putative vitamin uptake transporter ISN38_03955 PF02574 Homocysteine S-methyltransferase ISN38_03960 PF00324 Amino acid permease ISN38_03970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISN38_03980 PF01588 Putative tRNA binding domain ISN38_03980 PF09334 tRNA synthetases class I (M) ISN38_03990 PF04060 Putative Fe-S cluster ISN38_04005 PF04542 Sigma-70 region 2 ISN38_04005 PF04545 Sigma-70, region 4 ISN38_04050 PF01042 Endoribonuclease L-PSP ISN38_04060 PF09924 Uncharacterised conserved protein (DUF2156) ISN38_04060 PF03706 Lysylphosphatidylglycerol synthase TM region ISN38_04090 PF07690 Major Facilitator Superfamily ISN38_04100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISN38_04105 PF08274 PhnA Zinc-Ribbon ISN38_04105 PF03831 PhnA domain ISN38_04110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISN38_04120 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus ISN38_04120 PF05175 Methyltransferase small domain ISN38_04150 PF01258 Prokaryotic dksA/traR C4-type zinc finger ISN38_04160 PF01863 Protein of unknown function DUF45 ISN38_04180 PF13472 GDSL-like Lipase/Acylhydrolase family ISN38_04185 PF00672 HAMP domain ISN38_04185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_04185 PF00512 His Kinase A (phospho-acceptor) domain ISN38_04185 PF01627 Hpt domain ISN38_04185 PF00072 Response regulator receiver domain ISN38_04190 PF01011 PQQ enzyme repeat ISN38_04190 PF13360 PQQ-like domain ISN38_04195 PF07729 FCD domain ISN38_04195 PF00392 Bacterial regulatory proteins, gntR family ISN38_04265 PF01642 Methylmalonyl-CoA mutase ISN38_04265 PF02310 B12 binding domain ISN38_04285 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ISN38_04285 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ISN38_04290 PF03797 Autotransporter beta-domain ISN38_04290 PF00082 Subtilase family ISN38_04290 PF12951 Passenger-associated-transport-repeat ISN38_04295 PF02803 Thiolase, C-terminal domain ISN38_04295 PF00108 Thiolase, N-terminal domain ISN38_04305 PF00012 Hsp70 protein ISN38_04320 PF00072 Response regulator receiver domain ISN38_04320 PF00990 Diguanylate cyclase, GGDEF domain ISN38_04335 PF04679 ATP dependent DNA ligase C terminal region ISN38_04335 PF01068 ATP dependent DNA ligase domain ISN38_04335 PF04675 DNA ligase N terminus ISN38_04340 PF04675 DNA ligase N terminus ISN38_04340 PF04679 ATP dependent DNA ligase C terminal region ISN38_04340 PF01068 ATP dependent DNA ligase domain ISN38_04345 PF00271 Helicase conserved C-terminal domain ISN38_04345 PF08494 DEAD/H associated ISN38_04345 PF00270 DEAD/DEAH box helicase ISN38_04355 PF01494 FAD binding domain ISN38_04360 PF00313 'Cold-shock' DNA-binding domain ISN38_04365 PF01048 Phosphorylase superfamily ISN38_04370 PF00156 Phosphoribosyl transferase domain ISN38_04375 PF00933 Glycosyl hydrolase family 3 N terminal domain ISN38_04385 PF01928 CYTH domain ISN38_04390 PF05958 tRNA (Uracil-5-)-methyltransferase ISN38_04395 PF00486 Transcriptional regulatory protein, C terminal ISN38_04395 PF00072 Response regulator receiver domain ISN38_04405 PF01926 50S ribosome-binding GTPase ISN38_04405 PF07650 KH domain ISN38_04410 PF00035 Double-stranded RNA binding motif ISN38_04410 PF14622 Ribonuclease-III-like ISN38_04420 PF10502 Signal peptidase, peptidase S26 ISN38_04425 PF03144 Elongation factor Tu domain 2 ISN38_04425 PF00009 Elongation factor Tu GTP binding domain ISN38_04425 PF06421 GTP-binding protein LepA C-terminus ISN38_04425 PF00679 Elongation factor G C-terminus ISN38_04430 PF13180 PDZ domain ISN38_04440 PF04542 Sigma-70 region 2 ISN38_04440 PF08281 Sigma-70, region 4 ISN38_04445 PF00378 Enoyl-CoA hydratase/isomerase ISN38_04445 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISN38_04445 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISN38_04455 PF01545 Cation efflux family ISN38_04460 PF03601 Conserved hypothetical protein 698 ISN38_04465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN38_04475 PF05188 MutS domain II ISN38_04475 PF05190 MutS family domain IV ISN38_04475 PF00488 MutS domain V ISN38_04475 PF01624 MutS domain I ISN38_04475 PF05192 MutS domain III ISN38_04490 PF00141 Peroxidase ISN38_04495 PF01479 S4 domain ISN38_04505 PF01554 MatE ISN38_04510 PF01245 Ribosomal protein L19 ISN38_04515 PF01746 tRNA (Guanine-1)-methyltransferase ISN38_04520 PF05239 PRC-barrel domain ISN38_04520 PF01782 RimM N-terminal domain ISN38_04525 PF00886 Ribosomal protein S16 ISN38_04535 PF03060 Nitronate monooxygenase ISN38_04540 PF02978 Signal peptide binding domain ISN38_04540 PF02881 SRP54-type protein, helical bundle domain ISN38_04540 PF00448 SRP54-type protein, GTPase domain ISN38_04550 PF01263 Aldose 1-epimerase ISN38_04555 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ISN38_04565 PF00999 Sodium/hydrogen exchanger family ISN38_04575 PF13417 Glutathione S-transferase, N-terminal domain ISN38_04575 PF00043 Glutathione S-transferase, C-terminal domain ISN38_04580 PF14508 Glycosyl-hydrolase 97 N-terminal ISN38_04580 PF10566 Glycoside hydrolase 97 ISN38_04580 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation ISN38_04590 PF02653 Branched-chain amino acid transport system / permease component ISN38_04595 PF02653 Branched-chain amino acid transport system / permease component ISN38_04600 PF00005 ABC transporter ISN38_04605 PF13407 Periplasmic binding protein domain ISN38_04610 PF00171 Aldehyde dehydrogenase family ISN38_04620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN38_04620 PF03466 LysR substrate binding domain ISN38_04630 PF00920 Dehydratase family ISN38_04635 PF01464 Transglycosylase SLT domain ISN38_04650 PF00263 Bacterial type II and III secretion system protein ISN38_04650 PF03958 Bacterial type II/III secretion system short domain ISN38_04655 PF12833 Helix-turn-helix domain ISN38_04670 PF18269 T3SS EscN ATPase C-terminal domain ISN38_04670 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISN38_04670 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISN38_04675 PF06635 Nodulation protein NolV ISN38_04685 PF01514 Secretory protein of YscJ/FliF family ISN38_04700 PF01312 FlhB HrpN YscU SpaS Family ISN38_04705 PF00771 FHIPEP family ISN38_04720 PF00813 FliP family ISN38_04725 PF01313 Bacterial export proteins, family 3 ISN38_04755 PF00072 Response regulator receiver domain ISN38_04755 PF00486 Transcriptional regulatory protein, C terminal ISN38_04785 PF05656 Protein of unknown function (DUF805) ISN38_04790 PF18073 Rubredoxin metal binding domain ISN38_04795 PF00155 Aminotransferase class I and II ISN38_04805 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ISN38_04810 PF00510 Cytochrome c oxidase subunit III ISN38_04815 PF00115 Cytochrome C and Quinol oxidase polypeptide I ISN38_04820 PF06481 COX Aromatic Rich Motif ISN38_04820 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ISN38_04835 PF02401 LytB protein ISN38_04840 PF01252 Signal peptidase (SPase) II ISN38_04845 PF00133 tRNA synthetases class I (I, L, M and V) ISN38_04845 PF06827 Zinc finger found in FPG and IleRS ISN38_04845 PF08264 Anticodon-binding domain of tRNA ISN38_04850 PF06574 FAD synthetase ISN38_04850 PF01687 Riboflavin kinase ISN38_04870 PF03023 Lipid II flippase MurJ ISN38_04875 PF01649 Ribosomal protein S20 ISN38_04880 PF01926 50S ribosome-binding GTPase ISN38_04880 PF01018 GTP1/OBG ISN38_04890 PF01016 Ribosomal L27 protein ISN38_04895 PF00829 Ribosomal prokaryotic L21 protein ISN38_04900 PF00005 ABC transporter ISN38_04900 PF17760 UvrA interaction domain ISN38_04900 PF17755 UvrA DNA-binding domain ISN38_04915 PF00378 Enoyl-CoA hydratase/isomerase ISN38_04930 PF13202 EF hand ISN38_04930 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISN38_04935 PF04376 Arginine-tRNA-protein transferase, N terminus ISN38_04935 PF04377 Arginine-tRNA-protein transferase, C terminus ISN38_04945 PF02222 ATP-grasp domain ISN38_04945 PF01370 NAD dependent epimerase/dehydratase family ISN38_04950 PF00355 Rieske [2Fe-2S] domain ISN38_04950 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ISN38_04995 PF04607 Region found in RelA / SpoT proteins ISN38_04995 PF02824 TGS domain ISN38_04995 PF13291 ACT domain ISN38_05010 PF12706 Beta-lactamase superfamily domain ISN38_05015 PF03070 TENA/THI-4/PQQC family ISN38_05020 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ISN38_05025 PF13186 Iron-sulfur cluster-binding domain ISN38_05025 PF04055 Radical SAM superfamily ISN38_05035 PF00654 Voltage gated chloride channel ISN38_05040 PF00270 DEAD/DEAH box helicase ISN38_05040 PF04408 Helicase associated domain (HA2) ISN38_05040 PF00271 Helicase conserved C-terminal domain ISN38_05040 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ISN38_05040 PF11898 Domain of unknown function (DUF3418) ISN38_05045 PF00210 Ferritin-like domain ISN38_05050 PF00271 Helicase conserved C-terminal domain ISN38_05050 PF00570 HRDC domain ISN38_05050 PF16124 RecQ zinc-binding ISN38_05050 PF09382 RQC domain ISN38_05050 PF00270 DEAD/DEAH box helicase ISN38_05070 PF06508 Queuosine biosynthesis protein QueC ISN38_05075 PF04055 Radical SAM superfamily ISN38_05085 PF00691 OmpA family ISN38_05090 PF07676 WD40-like Beta Propeller Repeat ISN38_05090 PF04052 TolB amino-terminal domain ISN38_05100 PF02472 Biopolymer transport protein ExbD/TolR ISN38_05105 PF01618 MotA/TolQ/ExbB proton channel family ISN38_05110 PF03061 Thioesterase superfamily ISN38_05115 PF05496 Holliday junction DNA helicase RuvB P-loop domain ISN38_05115 PF05491 RuvB C-terminal winged helix domain ISN38_05115 PF17864 RuvB AAA lid domain ISN38_05120 PF02705 K+ potassium transporter ISN38_05125 PF01330 RuvA N terminal domain ISN38_05125 PF07499 RuvA, C-terminal domain ISN38_05130 PF02075 Crossover junction endodeoxyribonuclease RuvC ISN38_05135 PF01709 Transcriptional regulator ISN38_05155 PF01336 OB-fold nucleic acid binding domain ISN38_05155 PF00152 tRNA synthetases class II (D, K and N) ISN38_05155 PF02938 GAD domain ISN38_05175 PF03932 CutC family ISN38_05180 PF01112 Asparaginase ISN38_05200 PF01339 CheB methylesterase ISN38_05200 PF00072 Response regulator receiver domain ISN38_05205 PF01584 CheW-like domain ISN38_05205 PF02895 Signal transducing histidine kinase, homodimeric domain ISN38_05205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_05205 PF01627 Hpt domain ISN38_05205 PF00072 Response regulator receiver domain ISN38_05210 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ISN38_05210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_05215 PF01584 CheW-like domain ISN38_05220 PF00072 Response regulator receiver domain ISN38_05225 PF00072 Response regulator receiver domain ISN38_05230 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ISN38_05230 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ISN38_05245 PF00814 Glycoprotease family ISN38_05250 PF04851 Type III restriction enzyme, res subunit ISN38_05250 PF13307 Helicase C-terminal domain ISN38_05260 PF14814 Bifunctional transglycosylase second domain ISN38_05260 PF00905 Penicillin binding protein transpeptidase domain ISN38_05260 PF00912 Transglycosylase ISN38_05265 PF00535 Glycosyl transferase family 2 ISN38_05270 PF00730 HhH-GPD superfamily base excision DNA repair protein ISN38_05285 PF00072 Response regulator receiver domain ISN38_05285 PF00196 Bacterial regulatory proteins, luxR family ISN38_05290 PF07730 Histidine kinase ISN38_05300 PF03775 Septum formation inhibitor MinC, C-terminal domain ISN38_05300 PF05209 Septum formation inhibitor MinC, N-terminal domain ISN38_05305 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ISN38_05310 PF03776 Septum formation topological specificity factor MinE ISN38_05320 PF13493 Domain of unknown function (DUF4118) ISN38_05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_05320 PF02702 Osmosensitive K+ channel His kinase sensor domain ISN38_05320 PF00512 His Kinase A (phospho-acceptor) domain ISN38_05325 PF00072 Response regulator receiver domain ISN38_05325 PF00486 Transcriptional regulatory protein, C terminal ISN38_05335 PF08019 Phosphoethanolamine transferase EptA/EptB ISN38_05335 PF00884 Sulfatase ISN38_05355 PF07690 Major Facilitator Superfamily ISN38_05360 PF00664 ABC transporter transmembrane region ISN38_05360 PF00005 ABC transporter ISN38_05360 PF03412 Peptidase C39 family ISN38_05380 PF02347 Glycine cleavage system P-protein ISN38_05390 PF06628 Catalase-related immune-responsive ISN38_05390 PF18011 C-terminal domain found in long catalases ISN38_05390 PF00199 Catalase ISN38_05400 PF13649 Methyltransferase domain ISN38_05405 PF02585 GlcNAc-PI de-N-acetylase ISN38_05415 PF13823 Alcohol dehydrogenase GroES-associated ISN38_05415 PF08240 Alcohol dehydrogenase GroES-like domain ISN38_05415 PF00107 Zinc-binding dehydrogenase ISN38_05425 PF10091 Putative glucoamylase ISN38_05425 PF06165 Glycosyltransferase family 36 ISN38_05425 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ISN38_05435 PF17755 UvrA DNA-binding domain ISN38_05470 PF01433 Peptidase family M1 domain ISN38_05480 PF00709 Adenylosuccinate synthetase ISN38_05490 PF01145 SPFH domain / Band 7 family ISN38_05495 PF12221 Bacterial membrane protein N terminal ISN38_05495 PF01145 SPFH domain / Band 7 family ISN38_05500 PF00107 Zinc-binding dehydrogenase ISN38_05500 PF08240 Alcohol dehydrogenase GroES-like domain ISN38_05505 PF00072 Response regulator receiver domain ISN38_05510 PF00226 DnaJ domain ISN38_05510 PF01556 DnaJ C terminal domain ISN38_05520 PF08534 Redoxin ISN38_05550 PF00207 Alpha-2-macroglobulin family ISN38_05550 PF17962 Bacterial macroglobulin domain 6 ISN38_05550 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ISN38_05550 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ISN38_05550 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain ISN38_05550 PF07703 Alpha-2-macroglobulin bait region domain ISN38_05550 PF01835 MG2 domain ISN38_05550 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ISN38_05560 PF07715 TonB-dependent Receptor Plug Domain ISN38_05560 PF00593 TonB dependent receptor ISN38_05565 PF04303 PrpF protein ISN38_05575 PF00694 Aconitase C-terminal domain ISN38_05575 PF00330 Aconitase family (aconitate hydratase) ISN38_05580 PF00285 Citrate synthase, C-terminal domain ISN38_05590 PF00285 Citrate synthase, C-terminal domain ISN38_05595 PF01726 LexA DNA binding domain ISN38_05595 PF00717 Peptidase S24-like ISN38_05610 PF07733 Bacterial DNA polymerase III alpha NTPase domain ISN38_05610 PF01336 OB-fold nucleic acid binding domain ISN38_05610 PF14579 Helix-hairpin-helix motif ISN38_05610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ISN38_05610 PF02811 PHP domain ISN38_05640 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ISN38_05640 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ISN38_05645 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ISN38_05650 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system ISN38_05665 PF09115 DNA polymerase III, delta subunit, C terminal ISN38_05670 PF02223 Thymidylate kinase ISN38_05675 PF02618 YceG-like family ISN38_05680 PF00425 chorismate binding enzyme ISN38_05680 PF04715 Anthranilate synthase component I, N terminal region ISN38_05685 PF02801 Beta-ketoacyl synthase, C-terminal domain ISN38_05685 PF00109 Beta-ketoacyl synthase, N-terminal domain ISN38_05690 PF00550 Phosphopantetheine attachment site ISN38_05700 PF00698 Acyl transferase domain ISN38_05705 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISN38_05705 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISN38_05710 PF01783 Ribosomal L32p protein family ISN38_05715 PF02620 Large ribosomal RNA subunit accumulation protein YceD ISN38_05720 PF02545 Maf-like protein ISN38_05740 PF07726 ATPase family associated with various cellular activities (AAA) ISN38_05740 PF17863 AAA lid domain ISN38_05750 PF11992 Domain of unknown function (DUF3488) ISN38_05750 PF13559 Domain of unknown function (DUF4129) ISN38_05750 PF01841 Transglutaminase-like superfamily ISN38_05760 PF01230 HIT domain ISN38_05765 PF13662 Toprim domain ISN38_05765 PF02132 RecR protein ISN38_05770 PF02575 YbaB/EbfC DNA-binding family ISN38_05775 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ISN38_05775 PF12170 DNA polymerase III tau subunit V interacting with alpha ISN38_05775 PF12169 DNA polymerase III subunits gamma and tau domain III ISN38_05800 PF02391 MoaE protein ISN38_05805 PF02597 ThiS family ISN38_05810 PF01967 MoaC family ISN38_05820 PF04055 Radical SAM superfamily ISN38_05820 PF06463 Molybdenum Cofactor Synthesis C ISN38_05825 PF12706 Beta-lactamase superfamily domain ISN38_05835 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISN38_05860 PF00929 Exonuclease ISN38_05865 PF00075 RNase H ISN38_05875 PF00753 Metallo-beta-lactamase superfamily ISN38_05875 PF16123 Hydroxyacylglutathione hydrolase C-terminus ISN38_05880 PF01476 LysM domain ISN38_05880 PF05257 CHAP domain ISN38_05905 PF00216 Bacterial DNA-binding protein ISN38_05910 PF02190 ATP-dependent protease La (LON) substrate-binding domain ISN38_05910 PF00004 ATPase family associated with various cellular activities (AAA) ISN38_05910 PF05362 Lon protease (S16) C-terminal proteolytic domain ISN38_05915 PF07724 AAA domain (Cdc48 subfamily) ISN38_05915 PF06689 ClpX C4-type zinc finger ISN38_05915 PF10431 C-terminal, D2-small domain, of ClpB protein ISN38_05920 PF00574 Clp protease ISN38_05925 PF05697 Bacterial trigger factor protein (TF) ISN38_05925 PF05698 Bacterial trigger factor protein (TF) C-terminus ISN38_05965 PF00180 Isocitrate/isopropylmalate dehydrogenase ISN38_05965 PF18324 Hypothetical protein TT1725 ISN38_05975 PF00462 Glutaredoxin ISN38_05980 PF13181 Tetratricopeptide repeat ISN38_05980 PF01435 Peptidase family M48 ISN38_05985 PF00486 Transcriptional regulatory protein, C terminal ISN38_05985 PF00072 Response regulator receiver domain ISN38_05990 PF00989 PAS fold ISN38_05990 PF11808 Phosphate regulon sensor protein PhoR ISN38_05990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_05990 PF00512 His Kinase A (phospho-acceptor) domain ISN38_05995 PF17941 Polyphosphate kinase C-terminal domain 1 ISN38_05995 PF13089 Polyphosphate kinase N-terminal domain ISN38_05995 PF02503 Polyphosphate kinase middle domain ISN38_05995 PF13090 Polyphosphate kinase C-terminal domain 2 ISN38_06000 PF02541 Ppx/GppA phosphatase family ISN38_06005 PF00534 Glycosyl transferases group 1 ISN38_06005 PF13439 Glycosyltransferase Family 4 ISN38_06010 PF01569 PAP2 superfamily ISN38_06015 PF00149 Calcineurin-like phosphoesterase ISN38_06030 PF04305 Protein of unknown function (DUF455) ISN38_06035 PF00156 Phosphoribosyl transferase domain ISN38_06050 PF02875 Mur ligase family, glutamate ligase domain ISN38_06050 PF08245 Mur ligase middle domain ISN38_06055 PF00300 Histidine phosphatase superfamily (branch 1) ISN38_06060 PF10459 Peptidase S46 ISN38_06065 PF08240 Alcohol dehydrogenase GroES-like domain ISN38_06065 PF00107 Zinc-binding dehydrogenase ISN38_06075 PF17850 CysA C-terminal regulatory domain ISN38_06075 PF00005 ABC transporter ISN38_06075 PF12857 TOBE-like domain ISN38_06080 PF00528 Binding-protein-dependent transport system inner membrane component ISN38_06085 PF00528 Binding-protein-dependent transport system inner membrane component ISN38_06095 PF00155 Aminotransferase class I and II ISN38_06100 PF00849 RNA pseudouridylate synthase ISN38_06110 PF00223 Photosystem I psaA/psaB protein ISN38_06110 PF00691 OmpA family ISN38_06130 PF00248 Aldo/keto reductase family ISN38_06135 PF08240 Alcohol dehydrogenase GroES-like domain ISN38_06135 PF00107 Zinc-binding dehydrogenase ISN38_06140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISN38_06140 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN38_06165 PF03009 Glycerophosphoryl diester phosphodiesterase family ISN38_06185 PF00043 Glutathione S-transferase, C-terminal domain ISN38_06185 PF02798 Glutathione S-transferase, N-terminal domain ISN38_06200 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ISN38_06200 PF00056 lactate/malate dehydrogenase, NAD binding domain ISN38_06210 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISN38_06215 PF03144 Elongation factor Tu domain 2 ISN38_06215 PF00679 Elongation factor G C-terminus ISN38_06215 PF00009 Elongation factor Tu GTP binding domain ISN38_06230 PF01474 Class-II DAHP synthetase family ISN38_06240 PF02600 Disulfide bond formation protein DsbB ISN38_06245 PF01196 Ribosomal protein L17 ISN38_06250 PF01000 RNA polymerase Rpb3/RpoA insert domain ISN38_06250 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ISN38_06250 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ISN38_06255 PF01479 S4 domain ISN38_06255 PF00163 Ribosomal protein S4/S9 N-terminal domain ISN38_06260 PF00411 Ribosomal protein S11 ISN38_06265 PF00416 Ribosomal protein S13/S18 ISN38_06270 PF00344 SecY translocase ISN38_06275 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ISN38_06280 PF00327 Ribosomal protein L30p/L7e ISN38_06285 PF03719 Ribosomal protein S5, C-terminal domain ISN38_06285 PF00333 Ribosomal protein S5, N-terminal domain ISN38_06290 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ISN38_06295 PF00347 Ribosomal protein L6 ISN38_06300 PF00410 Ribosomal protein S8 ISN38_06305 PF00253 Ribosomal protein S14p/S29e ISN38_06310 PF00281 Ribosomal protein L5 ISN38_06310 PF00673 ribosomal L5P family C-terminus ISN38_06315 PF00467 KOW motif ISN38_06315 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ISN38_06320 PF00238 Ribosomal protein L14p/L23e ISN38_06325 PF00366 Ribosomal protein S17 ISN38_06330 PF00831 Ribosomal L29 protein ISN38_06335 PF00252 Ribosomal protein L16p/L10e ISN38_06340 PF00189 Ribosomal protein S3, C-terminal domain ISN38_06340 PF07650 KH domain ISN38_06345 PF00237 Ribosomal protein L22p/L17e ISN38_06350 PF00203 Ribosomal protein S19 ISN38_06355 PF03947 Ribosomal Proteins L2, C-terminal domain ISN38_06355 PF00181 Ribosomal Proteins L2, RNA binding domain ISN38_06360 PF00276 Ribosomal protein L23 ISN38_06365 PF00573 Ribosomal protein L4/L1 family ISN38_06370 PF00297 Ribosomal protein L3 ISN38_06375 PF00338 Ribosomal protein S10p/S20e ISN38_06380 PF00009 Elongation factor Tu GTP binding domain ISN38_06380 PF03144 Elongation factor Tu domain 2 ISN38_06380 PF03143 Elongation factor Tu C-terminal domain ISN38_06385 PF14492 Elongation Factor G, domain II ISN38_06385 PF00679 Elongation factor G C-terminus ISN38_06385 PF00009 Elongation factor Tu GTP binding domain ISN38_06385 PF03764 Elongation factor G, domain IV ISN38_06385 PF03144 Elongation factor Tu domain 2 ISN38_06390 PF00177 Ribosomal protein S7p/S5e ISN38_06395 PF00164 Ribosomal protein S12/S23 ISN38_06400 PF04983 RNA polymerase Rpb1, domain 3 ISN38_06400 PF04998 RNA polymerase Rpb1, domain 5 ISN38_06400 PF05000 RNA polymerase Rpb1, domain 4 ISN38_06400 PF00623 RNA polymerase Rpb1, domain 2 ISN38_06400 PF04997 RNA polymerase Rpb1, domain 1 ISN38_06405 PF04563 RNA polymerase beta subunit ISN38_06405 PF04560 RNA polymerase Rpb2, domain 7 ISN38_06405 PF10385 RNA polymerase beta subunit external 1 domain ISN38_06405 PF04565 RNA polymerase Rpb2, domain 3 ISN38_06405 PF04561 RNA polymerase Rpb2, domain 2 ISN38_06405 PF00562 RNA polymerase Rpb2, domain 6 ISN38_06410 PF00542 Ribosomal protein L7/L12 C-terminal domain ISN38_06410 PF16320 Ribosomal protein L7/L12 dimerisation domain ISN38_06415 PF00466 Ribosomal protein L10 ISN38_06420 PF00687 Ribosomal protein L1p/L10e family ISN38_06425 PF00298 Ribosomal protein L11, RNA binding domain ISN38_06425 PF03946 Ribosomal protein L11, N-terminal domain ISN38_06430 PF02357 Transcription termination factor nusG ISN38_06430 PF00467 KOW motif ISN38_06435 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ISN38_06445 PF03143 Elongation factor Tu C-terminal domain ISN38_06445 PF03144 Elongation factor Tu domain 2 ISN38_06445 PF00009 Elongation factor Tu GTP binding domain ISN38_06465 PF06071 Protein of unknown function (DUF933) ISN38_06465 PF01926 50S ribosome-binding GTPase ISN38_06470 PF01195 Peptidyl-tRNA hydrolase ISN38_06475 PF01386 Ribosomal L25p family ISN38_06475 PF14693 Ribosomal protein TL5, C-terminal domain ISN38_06480 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ISN38_06480 PF14572 Phosphoribosyl synthetase-associated domain ISN38_06490 PF08544 GHMP kinases C terminal ISN38_06490 PF00288 GHMP kinases N terminal domain ISN38_06495 PF03550 Outer membrane lipoprotein LolB ISN38_06505 PF01488 Shikimate / quinate 5-dehydrogenase ISN38_06505 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ISN38_06505 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ISN38_06510 PF00472 RF-1 domain ISN38_06510 PF03462 PCRF domain ISN38_06535 PF05506 Domain of unknown function (DUF756) ISN38_06535 PF04185 Phosphoesterase family ISN38_06550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN38_06550 PF03466 LysR substrate binding domain ISN38_06560 PF00005 ABC transporter ISN38_06560 PF12848 ABC transporter ISN38_06565 PF07715 TonB-dependent Receptor Plug Domain ISN38_06565 PF00593 TonB dependent receptor ISN38_06570 PF07715 TonB-dependent Receptor Plug Domain ISN38_06570 PF00593 TonB dependent receptor ISN38_06590 PF05175 Methyltransferase small domain ISN38_06590 PF17827 PrmC N-terminal domain ISN38_06595 PF00578 AhpC/TSA family ISN38_06595 PF10417 C-terminal domain of 1-Cys peroxiredoxin ISN38_06600 PF13192 Thioredoxin domain ISN38_06600 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN38_06605 PF03466 LysR substrate binding domain ISN38_06605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN38_06615 PF01272 Transcription elongation factor, GreA/GreB, C-term ISN38_06615 PF14760 Rnk N-terminus ISN38_06620 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISN38_06625 PF01625 Peptide methionine sulfoxide reductase ISN38_06650 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISN38_06650 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ISN38_06655 PF00892 EamA-like transporter family ISN38_06675 PF01728 FtsJ-like methyltransferase ISN38_06675 PF18125 RlmM ferredoxin-like domain ISN38_06680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISN38_06680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISN38_06695 PF01494 FAD binding domain ISN38_06700 PF01494 FAD binding domain ISN38_06710 PF01923 Cobalamin adenosyltransferase ISN38_06715 PF00850 Histone deacetylase domain ISN38_06720 PF04453 LPS transport system D ISN38_06720 PF03968 OstA-like protein ISN38_06725 PF00639 PPIC-type PPIASE domain ISN38_06725 PF09312 SurA N-terminal domain ISN38_06730 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ISN38_06735 PF00398 Ribosomal RNA adenine dimethylase ISN38_06740 PF04379 ApaG domain ISN38_06745 PF00149 Calcineurin-like phosphoesterase ISN38_06750 PF00186 Dihydrofolate reductase ISN38_06755 PF00303 Thymidylate synthase ISN38_06760 PF01790 Prolipoprotein diacylglyceryl transferase ISN38_06775 PF04011 LemA family ISN38_06780 PF03741 Integral membrane protein TerC family ISN38_06785 PF01219 Prokaryotic diacylglycerol kinase ISN38_06795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_06795 PF00512 His Kinase A (phospho-acceptor) domain ISN38_06795 PF08521 Two-component sensor kinase N-terminal ISN38_06800 PF00486 Transcriptional regulatory protein, C terminal ISN38_06800 PF00072 Response regulator receiver domain ISN38_06805 PF13472 GDSL-like Lipase/Acylhydrolase family ISN38_06810 PF00005 ABC transporter ISN38_06835 PF00593 TonB dependent receptor ISN38_06835 PF07715 TonB-dependent Receptor Plug Domain ISN38_06845 PF00248 Aldo/keto reductase family ISN38_06850 PF07662 Na+ dependent nucleoside transporter C-terminus ISN38_06850 PF07670 Nucleoside recognition ISN38_06850 PF01773 Na+ dependent nucleoside transporter N-terminus ISN38_06855 PF00294 pfkB family carbohydrate kinase ISN38_06855 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISN38_06870 PF01207 Dihydrouridine synthase (Dus) ISN38_06880 PF01527 Transposase ISN38_06885 PF00285 Citrate synthase, C-terminal domain ISN38_06890 PF01197 Ribosomal protein L31 ISN38_06895 PF01156 Inosine-uridine preferring nucleoside hydrolase ISN38_06900 PF17191 RecG wedge domain ISN38_06900 PF00270 DEAD/DEAH box helicase ISN38_06900 PF00271 Helicase conserved C-terminal domain ISN38_06905 PF01042 Endoribonuclease L-PSP ISN38_06920 PF02824 TGS domain ISN38_06920 PF04607 Region found in RelA / SpoT proteins ISN38_06920 PF13291 ACT domain ISN38_06925 PF01192 RNA polymerase Rpb6 ISN38_06930 PF00625 Guanylate kinase ISN38_06935 PF08340 Domain of unknown function (DUF1732) ISN38_06935 PF03755 YicC-like family, N-terminal region ISN38_06940 PF01138 3' exoribonuclease family, domain 1 ISN38_06940 PF03725 3' exoribonuclease family, domain 2 ISN38_06945 PF01725 Ham1 family ISN38_06950 PF06969 HemN C-terminal domain ISN38_06950 PF04055 Radical SAM superfamily ISN38_06985 PF00293 NUDIX domain ISN38_06985 PF01467 Cytidylyltransferase-like ISN38_06995 PF03466 LysR substrate binding domain ISN38_06995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN38_07005 PF17804 Tail specific protease N-terminal domain ISN38_07005 PF03572 Peptidase family S41 ISN38_07005 PF00595 PDZ domain ISN38_07005 PF11818 C-terminal domain of tail specific protease (DUF3340) ISN38_07010 PF04055 Radical SAM superfamily ISN38_07010 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ISN38_07015 PF03099 Biotin/lipoate A/B protein ligase family ISN38_07020 PF04359 Protein of unknown function (DUF493) ISN38_07045 PF07943 Penicillin-binding protein 5, C-terminal domain ISN38_07045 PF00768 D-alanyl-D-alanine carboxypeptidase ISN38_07050 PF03330 Lytic transglycolase ISN38_07050 PF05036 Sporulation related domain ISN38_07055 PF13406 Transglycosylase SLT domain ISN38_07065 PF00295 Glycosyl hydrolases family 28 ISN38_07070 PF01083 Cutinase ISN38_07075 PF01098 Cell cycle protein ISN38_07080 PF03717 Penicillin-binding Protein dimerisation domain ISN38_07080 PF00905 Penicillin binding protein transpeptidase domain ISN38_07090 PF04085 rod shape-determining protein MreC ISN38_07100 PF00294 pfkB family carbohydrate kinase ISN38_07105 PF02954 Bacterial regulatory protein, Fis family ISN38_07105 PF01590 GAF domain ISN38_07105 PF00158 Sigma-54 interaction domain ISN38_07120 PF00364 Biotin-requiring enzyme ISN38_07120 PF00561 alpha/beta hydrolase fold ISN38_07125 PF01433 Peptidase family M1 domain ISN38_07125 PF11838 ERAP1-like C-terminal domain ISN38_07130 PF01209 ubiE/COQ5 methyltransferase family ISN38_07140 PF07715 TonB-dependent Receptor Plug Domain ISN38_07140 PF00593 TonB dependent receptor ISN38_07155 PF00004 ATPase family associated with various cellular activities (AAA) ISN38_07155 PF07724 AAA domain (Cdc48 subfamily) ISN38_07155 PF10431 C-terminal, D2-small domain, of ClpB protein ISN38_07160 PF00227 Proteasome subunit ISN38_07165 PF00589 Phage integrase family ISN38_07165 PF02899 Phage integrase, N-terminal SAM-like domain ISN38_07175 PF01678 Diaminopimelate epimerase ISN38_07185 PF04304 Protein of unknown function (DUF454) ISN38_07190 PF00326 Prolyl oligopeptidase family ISN38_07190 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ISN38_07195 PF00155 Aminotransferase class I and II ISN38_07200 PF01527 Transposase ISN38_07205 PF13276 HTH-like domain ISN38_07205 PF00665 Integrase core domain ISN38_07205 PF13333 Integrase core domain ISN38_07210 PF00326 Prolyl oligopeptidase family ISN38_07210 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ISN38_07225 PF01638 HxlR-like helix-turn-helix ISN38_07240 PF03900 Porphobilinogen deaminase, C-terminal domain ISN38_07240 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ISN38_07245 PF00072 Response regulator receiver domain ISN38_07245 PF04397 LytTr DNA-binding domain ISN38_07255 PF13632 Glycosyl transferase family group 2 ISN38_07260 PF13188 PAS domain ISN38_07260 PF00512 His Kinase A (phospho-acceptor) domain ISN38_07260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_07260 PF00072 Response regulator receiver domain ISN38_07260 PF08448 PAS fold ISN38_07265 PF00072 Response regulator receiver domain ISN38_07265 PF00486 Transcriptional regulatory protein, C terminal ISN38_07275 PF00534 Glycosyl transferases group 1 ISN38_07275 PF08323 Starch synthase catalytic domain ISN38_07280 PF02806 Alpha amylase, C-terminal all-beta domain ISN38_07280 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISN38_07280 PF00128 Alpha amylase, catalytic domain ISN38_07285 PF00128 Alpha amylase, catalytic domain ISN38_07285 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISN38_07285 PF11941 Domain of unknown function (DUF3459) ISN38_07290 PF02446 4-alpha-glucanotransferase ISN38_07295 PF00128 Alpha amylase, catalytic domain ISN38_07305 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISN38_07305 PF00128 Alpha amylase, catalytic domain ISN38_07310 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISN38_07315 PF00384 Molybdopterin oxidoreductase ISN38_07315 PF01568 Molydopterin dinucleotide binding domain ISN38_07315 PF04324 BFD-like [2Fe-2S] binding domain ISN38_07315 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISN38_07320 PF00355 Rieske [2Fe-2S] domain ISN38_07325 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN38_07325 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISN38_07325 PF18267 Rubredoxin NAD+ reductase C-terminal domain ISN38_07325 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISN38_07325 PF04324 BFD-like [2Fe-2S] binding domain ISN38_07330 PF07690 Major Facilitator Superfamily ISN38_07335 PF00005 ABC transporter ISN38_07340 PF01339 CheB methylesterase ISN38_07340 PF00072 Response regulator receiver domain ISN38_07345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISN38_07345 PF10414 Sirohaem synthase dimerisation region ISN38_07345 PF14824 Sirohaem biosynthesis protein central ISN38_07360 PF12161 HsdM N-terminal domain ISN38_07360 PF02384 N-6 DNA Methylase ISN38_07370 PF01420 Type I restriction modification DNA specificity domain ISN38_07375 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ISN38_07375 PF11867 Domain of unknown function (DUF3387) ISN38_07375 PF18766 SWI2/SNF2 ATPase ISN38_07385 PF07690 Major Facilitator Superfamily ISN38_07400 PF00158 Sigma-54 interaction domain ISN38_07400 PF02954 Bacterial regulatory protein, Fis family ISN38_07400 PF00072 Response regulator receiver domain ISN38_07405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_07405 PF00512 His Kinase A (phospho-acceptor) domain ISN38_07410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISN38_07410 PF00205 Thiamine pyrophosphate enzyme, central domain ISN38_07410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISN38_07420 PF00487 Fatty acid desaturase ISN38_07425 PF00111 2Fe-2S iron-sulfur cluster binding domain ISN38_07425 PF00175 Oxidoreductase NAD-binding domain ISN38_07425 PF00970 Oxidoreductase FAD-binding domain ISN38_07430 PF00440 Bacterial regulatory proteins, tetR family ISN38_07440 PF06745 KaiC ISN38_07445 PF00563 EAL domain ISN38_07445 PF00990 Diguanylate cyclase, GGDEF domain ISN38_07445 PF03707 Bacterial signalling protein N terminal repeat ISN38_07455 PF05974 Domain of unknown function (DUF892) ISN38_07460 PF05974 Domain of unknown function (DUF892) ISN38_07465 PF05067 Manganese containing catalase ISN38_07480 PF00672 HAMP domain ISN38_07480 PF02203 Tar ligand binding domain homologue ISN38_07480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_07515 PF01494 FAD binding domain ISN38_07520 PF00440 Bacterial regulatory proteins, tetR family ISN38_07520 PF08359 YsiA-like protein, C-terminal region ISN38_07525 PF12706 Beta-lactamase superfamily domain ISN38_07545 PF03377 TAL effector repeat ISN38_07565 PF00128 Alpha amylase, catalytic domain ISN38_07565 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISN38_07565 PF02806 Alpha amylase, C-terminal all-beta domain ISN38_07570 PF16657 Maltogenic Amylase, C-terminal domain ISN38_07570 PF00128 Alpha amylase, catalytic domain ISN38_07575 PF00128 Alpha amylase, catalytic domain ISN38_07575 PF11896 Domain of unknown function (DUF3416) ISN38_07585 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISN38_07585 PF00356 Bacterial regulatory proteins, lacI family ISN38_07590 PF07690 Major Facilitator Superfamily ISN38_07610 PF03377 TAL effector repeat ISN38_07615 PF04542 Sigma-70 region 2 ISN38_07615 PF03979 Sigma-70 factor, region 1.1 ISN38_07615 PF04546 Sigma-70, non-essential region ISN38_07615 PF00140 Sigma-70 factor, region 1.2 ISN38_07615 PF04539 Sigma-70 region 3 ISN38_07615 PF04545 Sigma-70, region 4 ISN38_07620 PF02580 D-Tyr-tRNA(Tyr) deacylase ISN38_07630 PF00583 Acetyltransferase (GNAT) family ISN38_07635 PF00925 GTP cyclohydrolase II ISN38_07655 PF00535 Glycosyl transferase family 2 ISN38_07670 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ISN38_07675 PF01029 NusB family ISN38_07675 PF01189 16S rRNA methyltransferase RsmB/F ISN38_07680 PF00551 Formyl transferase ISN38_07680 PF02911 Formyl transferase, C-terminal domain ISN38_07685 PF01327 Polypeptide deformylase ISN38_07690 PF01476 LysM domain ISN38_07695 PF17782 DprA winged helix domain ISN38_07695 PF02481 DNA recombination-mediator protein A ISN38_07700 PF04361 Protein of unknown function (DUF494) ISN38_07710 PF06271 RDD family ISN38_07715 PF01751 Toprim domain ISN38_07715 PF01131 DNA topoisomerase ISN38_07715 PF13368 Topoisomerase C-terminal repeat ISN38_07720 PF01300 Telomere recombination ISN38_07750 PF01343 Peptidase family S49 ISN38_07755 PF01554 MatE ISN38_07765 PF00270 DEAD/DEAH box helicase ISN38_07765 PF00271 Helicase conserved C-terminal domain ISN38_07765 PF17764 3′ DNA-binding domain (3′BD) ISN38_07765 PF18074 Primosomal protein N C-terminal domain ISN38_07765 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ISN38_07775 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN38_07780 PF03458 UPF0126 domain ISN38_07785 PF04545 Sigma-70, region 4 ISN38_07785 PF04542 Sigma-70 region 2 ISN38_07785 PF00140 Sigma-70 factor, region 1.2 ISN38_07790 PF03167 Uracil DNA glycosylase superfamily ISN38_07795 PF01339 CheB methylesterase ISN38_07795 PF00072 Response regulator receiver domain ISN38_07800 PF18075 FtsX extracellular domain ISN38_07805 PF00005 ABC transporter ISN38_07810 PF00270 DEAD/DEAH box helicase ISN38_07810 PF12300 ATP-dependent RNA helicase RhlB ISN38_07810 PF00271 Helicase conserved C-terminal domain ISN38_07815 PF00085 Thioredoxin ISN38_07820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISN38_07820 PF07497 Rho termination factor, RNA-binding domain ISN38_07820 PF07498 Rho termination factor, N-terminal domain ISN38_07835 PF02384 N-6 DNA Methylase ISN38_07850 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ISN38_07855 PF00593 TonB dependent receptor ISN38_07855 PF07715 TonB-dependent Receptor Plug Domain ISN38_07865 PF03971 Monomeric isocitrate dehydrogenase ISN38_07875 PF09704 CRISPR-associated protein (Cas_Cas5) ISN38_07895 PF01867 CRISPR associated protein Cas1 ISN38_07900 PF09827 CRISPR associated protein Cas2 ISN38_07910 PF04972 BON domain ISN38_07910 PF01476 LysM domain ISN38_07915 PF14489 QueF-like protein ISN38_07915 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ISN38_07925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN38_07930 PF00873 AcrB/AcrD/AcrF family ISN38_07935 PF00873 AcrB/AcrD/AcrF family ISN38_07945 PF07063 Domain of unknown function (DUF1338) ISN38_07995 PF01510 N-acetylmuramoyl-L-alanine amidase ISN38_08000 PF00593 TonB dependent receptor ISN38_08000 PF07715 TonB-dependent Receptor Plug Domain ISN38_08010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISN38_08010 PF13378 Enolase C-terminal domain-like ISN38_08020 PF13520 Amino acid permease ISN38_08040 PF07995 Glucose / Sorbosone dehydrogenase ISN38_08045 PF00933 Glycosyl hydrolase family 3 N terminal domain ISN38_08045 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISN38_08045 PF14310 Fibronectin type III-like domain ISN38_08055 PF14403 Circularly permuted ATP-grasp type 2 ISN38_08060 PF02152 Dihydroneopterin aldolase ISN38_08070 PF01165 Ribosomal protein S21 ISN38_08080 PF03631 Virulence factor BrkB ISN38_08085 PF10410 DnaB-helicase binding domain of primase ISN38_08085 PF08278 DNA primase DnaG DnaB-binding ISN38_08085 PF01807 CHC2 zinc finger ISN38_08085 PF08275 DNA primase catalytic core, N-terminal domain ISN38_08090 PF13593 SBF-like CPA transporter family (DUF4137) ISN38_08100 PF01040 UbiA prenyltransferase family ISN38_08125 PF00510 Cytochrome c oxidase subunit III ISN38_08130 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ISN38_08135 PF00115 Cytochrome C and Quinol oxidase polypeptide I ISN38_08140 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ISN38_08140 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ISN38_08150 PF00171 Aldehyde dehydrogenase family ISN38_08150 PF14850 DNA-binding domain of Proline dehydrogenase ISN38_08150 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ISN38_08150 PF01619 Proline dehydrogenase ISN38_08165 PF13520 Amino acid permease ISN38_08180 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ISN38_08195 PF03572 Peptidase family S41 ISN38_08195 PF13180 PDZ domain ISN38_08200 PF01551 Peptidase family M23 ISN38_08210 PF04389 Peptidase family M28 ISN38_08215 PF08240 Alcohol dehydrogenase GroES-like domain ISN38_08215 PF00107 Zinc-binding dehydrogenase ISN38_08245 PF00579 tRNA synthetases class I (W and Y) ISN38_08250 PF01551 Peptidase family M23 ISN38_08250 PF04225 Opacity-associated protein A LysM-like domain ISN38_08255 PF03702 Anhydro-N-acetylmuramic acid kinase ISN38_08265 PF07690 Major Facilitator Superfamily ISN38_08275 PF00156 Phosphoribosyl transferase domain ISN38_08285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISN38_08285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISN38_08285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISN38_08285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISN38_08290 PF00692 dUTPase ISN38_08295 PF02441 Flavoprotein ISN38_08295 PF04127 DNA / pantothenate metabolism flavoprotein ISN38_08300 PF04002 RadC-like JAB domain ISN38_08305 PF03485 Arginyl tRNA synthetase N terminal domain ISN38_08305 PF05746 DALR anticodon binding domain ISN38_08305 PF00750 tRNA synthetases class I (R) ISN38_08315 PF00106 short chain dehydrogenase ISN38_08335 PF03466 LysR substrate binding domain ISN38_08335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN38_08340 PF01757 Acyltransferase family ISN38_08345 PF03033 Glycosyltransferase family 28 N-terminal domain ISN38_08345 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase ISN38_08355 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISN38_08355 PF17944 Arginine decarboxylase C-terminal helical extension ISN38_08355 PF17810 Arginine decarboxylase helical bundle domain ISN38_08360 PF17284 Spermidine synthase tetramerisation domain ISN38_08375 PF00543 Nitrogen regulatory protein P-II ISN38_08380 PF04380 Membrane fusogenic activity ISN38_08385 PF13335 Magnesium chelatase, subunit ChlI C-terminal ISN38_08385 PF01078 Magnesium chelatase, subunit ChlI ISN38_08410 PF01040 UbiA prenyltransferase family ISN38_08415 PF02355 Protein export membrane protein ISN38_08415 PF07549 SecD/SecF GG Motif ISN38_08425 PF06968 Biotin and Thiamin Synthesis associated domain ISN38_08425 PF04055 Radical SAM superfamily ISN38_08430 PF00155 Aminotransferase class I and II ISN38_08435 PF12697 Alpha/beta hydrolase family ISN38_08445 PF13649 Methyltransferase domain ISN38_08465 PF00291 Pyridoxal-phosphate dependent enzyme ISN38_08475 PF01134 Glucose inhibited division protein A ISN38_08475 PF13932 GidA associated domain ISN38_08480 PF00563 EAL domain ISN38_08480 PF00990 Diguanylate cyclase, GGDEF domain ISN38_08480 PF03707 Bacterial signalling protein N terminal repeat ISN38_08485 PF02321 Outer membrane efflux protein ISN38_08490 PF00873 AcrB/AcrD/AcrF family ISN38_08495 PF00529 HlyD membrane-fusion protein of T1SS ISN38_08495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN38_08510 PF00132 Bacterial transferase hexapeptide (six repeats) ISN38_08520 PF07690 Major Facilitator Superfamily ISN38_08555 PF17863 AAA lid domain ISN38_08555 PF07726 ATPase family associated with various cellular activities (AAA) ISN38_08565 PF03738 Glutathionylspermidine synthase preATP-grasp ISN38_08575 PF00920 Dehydratase family ISN38_08605 PF07995 Glucose / Sorbosone dehydrogenase ISN38_08615 PF01594 AI-2E family transporter ISN38_08635 PF00202 Aminotransferase class-III ISN38_08665 PF04993 TfoX N-terminal domain ISN38_08670 PF00326 Prolyl oligopeptidase family ISN38_08685 PF00199 Catalase ISN38_08685 PF06628 Catalase-related immune-responsive ISN38_08700 PF06733 DEAD_2 ISN38_08700 PF13307 Helicase C-terminal domain ISN38_08710 PF01488 Shikimate / quinate 5-dehydrogenase ISN38_08710 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ISN38_08710 PF08501 Shikimate dehydrogenase substrate binding domain ISN38_08715 PF07676 WD40-like Beta Propeller Repeat ISN38_08715 PF04052 TolB amino-terminal domain ISN38_08720 PF00175 Oxidoreductase NAD-binding domain ISN38_08720 PF00258 Flavodoxin ISN38_08720 PF00667 FAD binding domain ISN38_08740 PF00490 Delta-aminolevulinic acid dehydratase ISN38_08775 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ISN38_08775 PF00326 Prolyl oligopeptidase family ISN38_08780 PF00043 Glutathione S-transferase, C-terminal domain ISN38_08780 PF02798 Glutathione S-transferase, N-terminal domain ISN38_08785 PF03350 Uncharacterized protein family, UPF0114 ISN38_08800 PF00005 ABC transporter ISN38_08805 PF00561 alpha/beta hydrolase fold ISN38_08810 PF01381 Helix-turn-helix ISN38_08820 PF00175 Oxidoreductase NAD-binding domain ISN38_08820 PF00111 2Fe-2S iron-sulfur cluster binding domain ISN38_08820 PF00970 Oxidoreductase FAD-binding domain ISN38_08825 PF00005 ABC transporter ISN38_08830 PF01061 ABC-2 type transporter ISN38_08845 PF01026 TatD related DNase ISN38_08865 PF00849 RNA pseudouridylate synthase ISN38_08875 PF00248 Aldo/keto reductase family ISN38_08880 PF16884 N-terminal domain of oxidoreductase ISN38_08880 PF00107 Zinc-binding dehydrogenase ISN38_08885 PF12146 Serine aminopeptidase, S33 ISN38_08920 PF01740 STAS domain ISN38_08920 PF00916 Sulfate permease family ISN38_08950 PF00990 Diguanylate cyclase, GGDEF domain ISN38_08955 PF00463 Isocitrate lyase family ISN38_08960 PF01274 Malate synthase ISN38_08965 PF03466 LysR substrate binding domain ISN38_08965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN38_08985 PF01432 Peptidase family M3 ISN38_08995 PF00472 RF-1 domain ISN38_09005 PF00849 RNA pseudouridylate synthase ISN38_09010 PF11412 Disulphide bond corrector protein DsbC ISN38_09010 PF02683 Cytochrome C biogenesis protein transmembrane region ISN38_09015 PF03109 ABC1 family ISN38_09025 PF01820 D-ala D-ala ligase N-terminus ISN38_09025 PF07478 D-ala D-ala ligase C-terminus ISN38_09035 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ISN38_09040 PF00144 Beta-lactamase ISN38_09050 PF00501 AMP-binding enzyme ISN38_09055 PF03692 Putative zinc- or iron-chelating domain ISN38_09065 PF00561 alpha/beta hydrolase fold ISN38_09070 PF02661 Fic/DOC family ISN38_09070 PF13784 Fic/DOC family N-terminal ISN38_09075 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISN38_09075 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISN38_09085 PF00675 Insulinase (Peptidase family M16) ISN38_09085 PF05193 Peptidase M16 inactive domain ISN38_09095 PF00588 SpoU rRNA Methylase family ISN38_09105 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ISN38_09105 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ISN38_09110 PF02556 Preprotein translocase subunit SecB ISN38_09150 PF00108 Thiolase, N-terminal domain ISN38_09150 PF02803 Thiolase, C-terminal domain ISN38_09160 PF00080 Copper/zinc superoxide dismutase (SODC) ISN38_09165 PF00080 Copper/zinc superoxide dismutase (SODC) ISN38_09170 PF02954 Bacterial regulatory protein, Fis family ISN38_09170 PF00072 Response regulator receiver domain ISN38_09170 PF00158 Sigma-54 interaction domain ISN38_09175 PF00512 His Kinase A (phospho-acceptor) domain ISN38_09175 PF00989 PAS fold ISN38_09175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_09180 PF00909 Ammonium Transporter Family ISN38_09185 PF00543 Nitrogen regulatory protein P-II ISN38_09190 PF00120 Glutamine synthetase, catalytic domain ISN38_09190 PF03951 Glutamine synthetase, beta-Grasp domain ISN38_09195 PF02673 Bacitracin resistance protein BacA ISN38_09200 PF01161 Phosphatidylethanolamine-binding protein ISN38_09215 PF12146 Serine aminopeptidase, S33 ISN38_09225 PF03061 Thioesterase superfamily ISN38_09230 PF13091 PLD-like domain ISN38_09245 PF13614 AAA domain ISN38_09290 PF00083 Sugar (and other) transporter ISN38_09320 PF01381 Helix-turn-helix ISN38_09325 PF00270 DEAD/DEAH box helicase ISN38_09325 PF00271 Helicase conserved C-terminal domain ISN38_09325 PF09369 Domain of unknown function (DUF1998) ISN38_09370 PF00310 Glutamine amidotransferases class-II ISN38_09370 PF01493 GXGXG motif ISN38_09370 PF04898 Glutamate synthase central domain ISN38_09370 PF01645 Conserved region in glutamate synthase ISN38_09375 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN38_09375 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISN38_09380 PF00150 Cellulase (glycosyl hydrolase family 5) ISN38_09385 PF00150 Cellulase (glycosyl hydrolase family 5) ISN38_09390 PF00150 Cellulase (glycosyl hydrolase family 5) ISN38_09395 PF02142 MGS-like domain ISN38_09435 PF00360 Phytochrome region ISN38_09435 PF13426 PAS domain ISN38_09435 PF01590 GAF domain ISN38_09435 PF08446 PAS fold ISN38_09440 PF01126 Heme oxygenase ISN38_09445 PF07690 Major Facilitator Superfamily ISN38_09450 PF13406 Transglycosylase SLT domain ISN38_09460 PF02810 SEC-C motif ISN38_09465 PF01925 Sulfite exporter TauE/SafE ISN38_09490 PF01227 GTP cyclohydrolase I ISN38_09495 PF00083 Sugar (and other) transporter ISN38_09530 PF08845 Toxin SymE, type I toxin-antitoxin system ISN38_09555 PF09386 Antitoxin ParD ISN38_09560 PF05016 ParE toxin of type II toxin-antitoxin system, parDE ISN38_09565 PF01230 HIT domain ISN38_09585 PF13538 UvrD-like helicase C-terminal domain ISN38_09590 PF12705 PD-(D/E)XK nuclease superfamily ISN38_09590 PF13361 UvrD-like helicase C-terminal domain ISN38_09590 PF00580 UvrD/REP helicase N-terminal domain ISN38_09595 PF17946 RecC C-terminal domain ISN38_09600 PF00005 ABC transporter ISN38_09605 PF02405 Permease MlaE ISN38_09610 PF02470 MlaD protein ISN38_09625 PF04333 MlaA lipoprotein ISN38_09630 PF00255 Glutathione peroxidase ISN38_09635 PF02646 RmuC family ISN38_09650 PF02308 MgtC family ISN38_09655 PF00512 His Kinase A (phospho-acceptor) domain ISN38_09655 PF13493 Domain of unknown function (DUF4118) ISN38_09655 PF00989 PAS fold ISN38_09655 PF08447 PAS fold ISN38_09655 PF13426 PAS domain ISN38_09655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_09660 PF00072 Response regulator receiver domain ISN38_09660 PF00196 Bacterial regulatory proteins, luxR family ISN38_09665 PF13520 Amino acid permease ISN38_09670 PF10947 Protein of unknown function (DUF2628) ISN38_09685 PF04820 Tryptophan halogenase ISN38_09710 PF10672 S-adenosylmethionine-dependent methyltransferase ISN38_09710 PF17785 PUA-like domain ISN38_09715 PF03741 Integral membrane protein TerC family ISN38_09725 PF01569 PAP2 superfamily ISN38_09730 PF01569 PAP2 superfamily ISN38_09745 PF01734 Patatin-like phospholipase ISN38_09765 PF01037 Lrp/AsnC ligand binding domain ISN38_09770 PF00351 Biopterin-dependent aromatic amino acid hydroxylase ISN38_09790 PF04962 KduI/IolB family ISN38_09795 PF00356 Bacterial regulatory proteins, lacI family ISN38_09800 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ISN38_09800 PF04616 Glycosyl hydrolases family 43 ISN38_09805 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ISN38_09815 PF03480 Bacterial extracellular solute-binding protein, family 7 ISN38_09830 PF00135 Carboxylesterase family ISN38_09860 PF07715 TonB-dependent Receptor Plug Domain ISN38_09860 PF00593 TonB dependent receptor ISN38_09880 PF02677 Epoxyqueuosine reductase QueH ISN38_09905 PF01804 Penicillin amidase ISN38_09955 PF00294 pfkB family carbohydrate kinase ISN38_09965 PF12241 Trans-2-enoyl-CoA reductase catalytic region ISN38_09965 PF07055 Enoyl reductase FAD binding domain ISN38_09965 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ISN38_09990 PF01070 FMN-dependent dehydrogenase ISN38_09995 PF13298 DNA polymerase Ligase (LigD) ISN38_09995 PF04679 ATP dependent DNA ligase C terminal region ISN38_09995 PF01068 ATP dependent DNA ligase domain ISN38_10000 PF02735 Ku70/Ku80 beta-barrel domain ISN38_10020 PF08240 Alcohol dehydrogenase GroES-like domain ISN38_10020 PF00107 Zinc-binding dehydrogenase ISN38_10025 PF00171 Aldehyde dehydrogenase family ISN38_10030 PF00158 Sigma-54 interaction domain ISN38_10030 PF01590 GAF domain ISN38_10030 PF02954 Bacterial regulatory protein, Fis family ISN38_10040 PF07715 TonB-dependent Receptor Plug Domain ISN38_10040 PF00593 TonB dependent receptor ISN38_10045 PF00155 Aminotransferase class I and II ISN38_10050 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ISN38_10055 PF01810 LysE type translocator ISN38_10065 PF04055 Radical SAM superfamily ISN38_10070 PF13396 Phospholipase_D-nuclease N-terminal ISN38_10070 PF13091 PLD-like domain ISN38_10080 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ISN38_10085 PF02472 Biopolymer transport protein ExbD/TolR ISN38_10090 PF02472 Biopolymer transport protein ExbD/TolR ISN38_10095 PF01618 MotA/TolQ/ExbB proton channel family ISN38_10100 PF03544 Gram-negative bacterial TonB protein C-terminal ISN38_10110 PF01435 Peptidase family M48 ISN38_10115 PF02517 CPBP intramembrane metalloprotease ISN38_10120 PF00204 DNA gyrase B ISN38_10120 PF00986 DNA gyrase B subunit, carboxyl terminus ISN38_10120 PF18053 DNA gyrase B subunit insert domain ISN38_10120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_10120 PF01751 Toprim domain ISN38_10125 PF02463 RecF/RecN/SMC N terminal domain ISN38_10130 PF02768 DNA polymerase III beta subunit, C-terminal domain ISN38_10130 PF02767 DNA polymerase III beta subunit, central domain ISN38_10130 PF00712 DNA polymerase III beta subunit, N-terminal domain ISN38_10135 PF11638 DnaA N-terminal domain ISN38_10135 PF08299 Bacterial dnaA protein helix-turn-helix ISN38_10135 PF00308 Bacterial dnaA protein ISN38_10140 PF00468 Ribosomal protein L34 ISN38_10145 PF00825 Ribonuclease P ISN38_10150 PF14849 YidC periplasmic domain ISN38_10150 PF02096 60Kd inner membrane protein ISN38_10155 PF01926 50S ribosome-binding GTPase ISN38_10155 PF10396 GTP-binding protein TrmE N-terminus ISN38_10155 PF12631 MnmE helical domain ISN38_10165 PF00005 ABC transporter ISN38_10180 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ISN38_10180 PF06827 Zinc finger found in FPG and IleRS ISN38_10180 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ISN38_10205 PF04349 Periplasmic glucan biosynthesis protein, MdoG ISN38_10215 PF00265 Thymidine kinase ISN38_10220 PF13361 UvrD-like helicase C-terminal domain ISN38_10220 PF00580 UvrD/REP helicase N-terminal domain ISN38_10225 PF05746 DALR anticodon binding domain ISN38_10225 PF02092 Glycyl-tRNA synthetase beta subunit ISN38_10235 PF02091 Glycyl-tRNA synthetase alpha subunit ISN38_10240 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISN38_10240 PF00437 Type II/IV secretion system protein ISN38_10245 PF00117 Glutamine amidotransferase class-I ISN38_10245 PF00958 GMP synthase C terminal domain ISN38_10255 PF00902 Sec-independent protein translocase protein (TatC) ISN38_10260 PF02416 mttA/Hcf106 family ISN38_10265 PF02416 mttA/Hcf106 family ISN38_10275 PF00762 Ferrochelatase ISN38_10280 PF12697 Alpha/beta hydrolase family ISN38_10290 PF04381 Putative exonuclease, RdgC ISN38_10295 PF01171 PP-loop family ISN38_10305 PF00356 Bacterial regulatory proteins, lacI family ISN38_10310 PF07488 Glycosyl hydrolase family 67 middle domain ISN38_10310 PF03648 Glycosyl hydrolase family 67 N-terminus ISN38_10310 PF07477 Glycosyl hydrolase family 67 C-terminus ISN38_10320 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISN38_10320 PF13378 Enolase C-terminal domain-like ISN38_10325 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ISN38_10325 PF04616 Glycosyl hydrolases family 43 ISN38_10330 PF14310 Fibronectin type III-like domain ISN38_10330 PF00933 Glycosyl hydrolase family 3 N terminal domain ISN38_10330 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISN38_10330 PF07691 PA14 domain ISN38_10335 PF08125 Mannitol dehydrogenase C-terminal domain ISN38_10335 PF01232 Mannitol dehydrogenase Rossmann domain ISN38_10355 PF08450 SMP-30/Gluconolactonase/LRE-like region ISN38_10365 PF00331 Glycosyl hydrolase family 10 ISN38_10370 PF02614 Glucuronate isomerase ISN38_10375 PF00331 Glycosyl hydrolase family 10 ISN38_10375 PF03422 Carbohydrate binding module (family 6) ISN38_10375 PF00553 Cellulose binding domain ISN38_10395 PF04616 Glycosyl hydrolases family 43 ISN38_10415 PF01553 Acyltransferase ISN38_10425 PF00356 Bacterial regulatory proteins, lacI family ISN38_10445 PF04820 Tryptophan halogenase ISN38_10450 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ISN38_10460 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISN38_10460 PF08479 POTRA domain, ShlB-type ISN38_10460 PF17287 POTRA domain ISN38_10510 PF04337 Protein of unknown function, DUF480 ISN38_10540 PF07244 Surface antigen variable number repeat ISN38_10540 PF01103 Surface antigen ISN38_10540 PF17243 POTRA domain TamA domain 1 ISN38_10545 PF04357 TamB, inner membrane protein subunit of TAM complex ISN38_10555 PF00982 Glycosyltransferase family 20 ISN38_10570 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ISN38_10570 PF06165 Glycosyltransferase family 36 ISN38_10580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_10580 PF00512 His Kinase A (phospho-acceptor) domain ISN38_10585 PF02659 Putative manganese efflux pump ISN38_10590 PF00072 Response regulator receiver domain ISN38_10590 PF00196 Bacterial regulatory proteins, luxR family ISN38_10595 PF16177 Acetyl-coenzyme A synthetase N-terminus ISN38_10595 PF00501 AMP-binding enzyme ISN38_10595 PF13193 AMP-binding enzyme C-terminal domain ISN38_10605 PF07690 Major Facilitator Superfamily ISN38_10610 PF00171 Aldehyde dehydrogenase family ISN38_10625 PF04226 Transglycosylase associated protein ISN38_10630 PF01648 4'-phosphopantetheinyl transferase superfamily ISN38_10645 PF02527 rRNA small subunit methyltransferase G ISN38_10650 PF13614 AAA domain ISN38_10655 PF02195 ParB-like nuclease domain ISN38_10655 PF17762 HTH domain found in ParB protein ISN38_10660 PF01370 NAD dependent epimerase/dehydratase family ISN38_10665 PF00535 Glycosyl transferase family 2 ISN38_10685 PF00873 AcrB/AcrD/AcrF family ISN38_10695 PF00830 Ribosomal L28 family ISN38_10700 PF00471 Ribosomal protein L33 ISN38_10705 PF13091 PLD-like domain ISN38_10705 PF13396 Phospholipase_D-nuclease N-terminal ISN38_10715 PF13361 UvrD-like helicase C-terminal domain ISN38_10715 PF00580 UvrD/REP helicase N-terminal domain ISN38_10730 PF14602 Hexapeptide repeat of succinyl-transferase ISN38_10730 PF12464 Maltose acetyltransferase ISN38_10735 PF00582 Universal stress protein family ISN38_10750 PF01367 5'-3' exonuclease, C-terminal SAM fold ISN38_10750 PF01612 3'-5' exonuclease ISN38_10750 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISN38_10750 PF00476 DNA polymerase family A ISN38_10755 PF04239 Protein of unknown function (DUF421) ISN38_10765 PF01218 Coproporphyrinogen III oxidase ISN38_10770 PF00296 Luciferase-like monooxygenase ISN38_10785 PF01654 Cytochrome bd terminal oxidase subunit I ISN38_10790 PF02322 Cytochrome bd terminal oxidase subunit II ISN38_10810 PF04820 Tryptophan halogenase ISN38_10815 PF00550 Phosphopantetheine attachment site ISN38_10830 PF07977 FabA-like domain ISN38_10855 PF00106 short chain dehydrogenase ISN38_10860 PF01494 FAD binding domain ISN38_10865 PF00535 Glycosyl transferase family 2 ISN38_10875 PF00109 Beta-ketoacyl synthase, N-terminal domain ISN38_10875 PF02801 Beta-ketoacyl synthase, C-terminal domain ISN38_10880 PF05166 YcgL domain ISN38_10890 PF00082 Subtilase family ISN38_10890 PF04151 Bacterial pre-peptidase C-terminal domain ISN38_10895 PF05662 Coiled stalk of trimeric autotransporter adhesin ISN38_10895 PF03895 YadA-like membrane anchor domain ISN38_10895 PF13018 Extended Signal Peptide of Type V secretion system ISN38_10895 PF05658 Head domain of trimeric autotransporter adhesin ISN38_10900 PF13188 PAS domain ISN38_10900 PF00072 Response regulator receiver domain ISN38_10900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_10900 PF08448 PAS fold ISN38_10900 PF00512 His Kinase A (phospho-acceptor) domain ISN38_10905 PF00486 Transcriptional regulatory protein, C terminal ISN38_10905 PF00072 Response regulator receiver domain ISN38_10910 PF00723 Glycosyl hydrolases family 15 ISN38_10915 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ISN38_10915 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ISN38_10920 PF00583 Acetyltransferase (GNAT) family ISN38_10920 PF13380 CoA binding domain ISN38_10920 PF13607 Succinyl-CoA ligase like flavodoxin domain ISN38_10945 PF00289 Biotin carboxylase, N-terminal domain ISN38_10945 PF00364 Biotin-requiring enzyme ISN38_10945 PF02785 Biotin carboxylase C-terminal domain ISN38_10945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISN38_10950 PF01039 Carboxyl transferase domain ISN38_10955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISN38_10955 PF02770 Acyl-CoA dehydrogenase, middle domain ISN38_10955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISN38_10970 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ISN38_10980 PF07683 Cobalamin synthesis protein cobW C-terminal domain ISN38_10980 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISN38_11000 PF03969 AFG1-like ATPase ISN38_11005 PF01047 MarR family ISN38_11010 PF02566 OsmC-like protein ISN38_11025 PF00317 Ribonucleotide reductase, all-alpha domain ISN38_11025 PF02867 Ribonucleotide reductase, barrel domain ISN38_11025 PF03477 ATP cone domain ISN38_11030 PF00268 Ribonucleotide reductase, small chain ISN38_11050 PF03466 LysR substrate binding domain ISN38_11050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN38_11055 PF07690 Major Facilitator Superfamily ISN38_11060 PF00082 Subtilase family ISN38_11060 PF04151 Bacterial pre-peptidase C-terminal domain ISN38_11070 PF08448 PAS fold ISN38_11070 PF00512 His Kinase A (phospho-acceptor) domain ISN38_11070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_11070 PF00072 Response regulator receiver domain ISN38_11070 PF13188 PAS domain ISN38_11075 PF00072 Response regulator receiver domain ISN38_11075 PF00486 Transcriptional regulatory protein, C terminal ISN38_11080 PF02146 Sir2 family ISN38_11085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISN38_11090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISN38_11090 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ISN38_11100 PF00551 Formyl transferase ISN38_11110 PF08267 Cobalamin-independent synthase, N-terminal domain ISN38_11110 PF01717 Cobalamin-independent synthase, Catalytic domain ISN38_11115 PF01207 Dihydrouridine synthase (Dus) ISN38_11125 PF00486 Transcriptional regulatory protein, C terminal ISN38_11125 PF00072 Response regulator receiver domain ISN38_11130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_11150 PF00665 Integrase core domain ISN38_11150 PF13276 HTH-like domain ISN38_11150 PF13333 Integrase core domain ISN38_11155 PF01527 Transposase ISN38_11160 PF06167 Glucose-regulated metallo-peptidase M90 ISN38_11170 PF03099 Biotin/lipoate A/B protein ligase family ISN38_11170 PF02237 Biotin protein ligase C terminal domain ISN38_11175 PF03309 Type III pantothenate kinase ISN38_11210 PF00579 tRNA synthetases class I (W and Y) ISN38_11215 PF00753 Metallo-beta-lactamase superfamily ISN38_11230 PF00892 EamA-like transporter family ISN38_11245 PF12704 MacB-like periplasmic core domain ISN38_11245 PF02687 FtsX-like permease family ISN38_11250 PF00005 ABC transporter ISN38_11255 PF01527 Transposase ISN38_11260 PF13276 HTH-like domain ISN38_11260 PF13333 Integrase core domain ISN38_11260 PF00665 Integrase core domain ISN38_11275 PF00199 Catalase ISN38_11280 PF00883 Cytosol aminopeptidase family, catalytic domain ISN38_11280 PF02789 Cytosol aminopeptidase family, N-terminal domain ISN38_11285 PF13419 Haloacid dehalogenase-like hydrolase ISN38_11290 PF01594 AI-2E family transporter ISN38_11310 PF00595 PDZ domain ISN38_11310 PF13180 PDZ domain ISN38_11350 PF00593 TonB dependent receptor ISN38_11350 PF07715 TonB-dependent Receptor Plug Domain ISN38_11365 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ISN38_11365 PF00326 Prolyl oligopeptidase family ISN38_11380 PF07715 TonB-dependent Receptor Plug Domain ISN38_11380 PF07660 Secretin and TonB N terminus short domain ISN38_11380 PF00593 TonB dependent receptor ISN38_11385 PF07715 TonB-dependent Receptor Plug Domain ISN38_11385 PF00593 TonB dependent receptor ISN38_11405 PF07308 Protein of unknown function (DUF1456) ISN38_11410 PF00455 DeoR C terminal sensor domain ISN38_11410 PF08220 DeoR-like helix-turn-helix domain ISN38_11415 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ISN38_11415 PF01266 FAD dependent oxidoreductase ISN38_11420 PF00230 Major intrinsic protein ISN38_11425 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISN38_11425 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISN38_11435 PF13419 Haloacid dehalogenase-like hydrolase ISN38_11440 PF00248 Aldo/keto reductase family ISN38_11455 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISN38_11460 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISN38_11460 PF13378 Enolase C-terminal domain-like ISN38_11465 PF05336 L-rhamnose mutarotase ISN38_11470 PF07690 Major Facilitator Superfamily ISN38_11475 PF01614 Bacterial transcriptional regulator ISN38_11475 PF09339 IclR helix-turn-helix domain ISN38_11480 PF16957 Malonate decarboxylase, alpha subunit, transporter ISN38_11485 PF06857 Malonate decarboxylase delta subunit (MdcD) ISN38_11490 PF01039 Carboxyl transferase domain ISN38_11500 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG ISN38_11505 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ISN38_11520 PF07729 FCD domain ISN38_11520 PF00392 Bacterial regulatory proteins, gntR family ISN38_11530 PF02678 Pirin ISN38_11530 PF05726 Pirin C-terminal cupin domain ISN38_11535 PF08281 Sigma-70, region 4 ISN38_11535 PF12680 SnoaL-like domain ISN38_11535 PF04542 Sigma-70 region 2 ISN38_11550 PF00328 Histidine phosphatase superfamily (branch 2) ISN38_11555 PF00698 Acyl transferase domain ISN38_11555 PF08240 Alcohol dehydrogenase GroES-like domain ISN38_11555 PF00107 Zinc-binding dehydrogenase ISN38_11555 PF14765 Polyketide synthase dehydratase ISN38_11555 PF02801 Beta-ketoacyl synthase, C-terminal domain ISN38_11555 PF00109 Beta-ketoacyl synthase, N-terminal domain ISN38_11555 PF08659 KR domain ISN38_11555 PF16197 Ketoacyl-synthetase C-terminal extension ISN38_11555 PF00550 Phosphopantetheine attachment site ISN38_11560 PF00924 Mechanosensitive ion channel ISN38_11560 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISN38_11560 PF12795 Mechanosensitive ion channel porin domain ISN38_11580 PF02734 DAK2 domain ISN38_11580 PF02733 Dak1 domain ISN38_11585 PF05661 Protein of unknown function (DUF808) ISN38_11590 PF00990 Diguanylate cyclase, GGDEF domain ISN38_11595 PF00294 pfkB family carbohydrate kinase ISN38_11610 PF00270 DEAD/DEAH box helicase ISN38_11610 PF00271 Helicase conserved C-terminal domain ISN38_11635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISN38_11635 PF02817 e3 binding domain ISN38_11635 PF00364 Biotin-requiring enzyme ISN38_11645 PF02780 Transketolase, C-terminal domain ISN38_11645 PF02779 Transketolase, pyrimidine binding domain ISN38_11650 PF00676 Dehydrogenase E1 component ISN38_11665 PF03301 Tryptophan 2,3-dioxygenase ISN38_11670 PF00854 POT family ISN38_11685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISN38_11690 PF04209 homogentisate 1,2-dioxygenase ISN38_11705 PF01699 Sodium/calcium exchanger protein ISN38_11710 PF03334 Na+/H+ antiporter subunit ISN38_11715 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ISN38_11720 PF01899 Na+/H+ ion antiporter subunit ISN38_11725 PF00361 Proton-conducting membrane transporter ISN38_11730 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ISN38_11735 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ISN38_11735 PF13244 Domain of unknown function (DUF4040) ISN38_11735 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ISN38_11735 PF00361 Proton-conducting membrane transporter ISN38_11740 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ISN38_11750 PF01259 SAICAR synthetase ISN38_11755 PF05099 Tellurite resistance protein TerB ISN38_11755 PF00226 DnaJ domain ISN38_11760 PF00834 Ribulose-phosphate 3 epimerase family ISN38_11765 PF00583 Acetyltransferase (GNAT) family ISN38_11770 PF00781 Diacylglycerol kinase catalytic domain ISN38_11775 PF00425 chorismate binding enzyme ISN38_11775 PF04715 Anthranilate synthase component I, N terminal region ISN38_11780 PF01212 Beta-eliminating lyase ISN38_11785 PF00117 Glutamine amidotransferase class-I ISN38_11790 PF02885 Glycosyl transferase family, helical bundle domain ISN38_11790 PF00591 Glycosyl transferase family, a/b domain ISN38_11795 PF00218 Indole-3-glycerol phosphate synthase ISN38_11805 PF01925 Sulfite exporter TauE/SafE ISN38_11810 PF00027 Cyclic nucleotide-binding domain ISN38_11810 PF00325 Bacterial regulatory proteins, crp family ISN38_11815 PF02675 S-adenosylmethionine decarboxylase ISN38_11820 PF00893 Small Multidrug Resistance protein ISN38_11830 PF03232 Ubiquinone biosynthesis protein COQ7 ISN38_11835 PF00572 Ribosomal protein L13 ISN38_11840 PF00380 Ribosomal protein S9/S16 ISN38_11855 PF00293 NUDIX domain ISN38_11860 PF04324 BFD-like [2Fe-2S] binding domain ISN38_11865 PF00210 Ferritin-like domain ISN38_11870 PF00672 HAMP domain ISN38_11870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISN38_11870 PF00072 Response regulator receiver domain ISN38_11870 PF01627 Hpt domain ISN38_11870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_11870 PF00512 His Kinase A (phospho-acceptor) domain ISN38_11875 PF00072 Response regulator receiver domain ISN38_11875 PF00563 EAL domain ISN38_11875 PF00990 Diguanylate cyclase, GGDEF domain ISN38_11895 PF01521 Iron-sulphur cluster biosynthesis ISN38_11900 PF00293 NUDIX domain ISN38_11900 PF09297 NADH pyrophosphatase zinc ribbon domain ISN38_11900 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ISN38_11935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN38_11935 PF03466 LysR substrate binding domain ISN38_11940 PF07690 Major Facilitator Superfamily ISN38_11945 PF12805 FUSC-like inner membrane protein yccS ISN38_11950 PF02843 Phosphoribosylglycinamide synthetase, C domain ISN38_11950 PF02844 Phosphoribosylglycinamide synthetase, N domain ISN38_11950 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ISN38_11955 PF02142 MGS-like domain ISN38_11955 PF01808 AICARFT/IMPCHase bienzyme ISN38_11960 PF01066 CDP-alcohol phosphatidyltransferase ISN38_11965 PF12146 Serine aminopeptidase, S33 ISN38_11965 PF12147 Putative methyltransferase ISN38_11990 PF02954 Bacterial regulatory protein, Fis family ISN38_12000 PF01381 Helix-turn-helix ISN38_12025 PF00289 Biotin carboxylase, N-terminal domain ISN38_12025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISN38_12025 PF02785 Biotin carboxylase C-terminal domain ISN38_12030 PF00364 Biotin-requiring enzyme ISN38_12035 PF01220 Dehydroquinase class II ISN38_12045 PF00578 AhpC/TSA family ISN38_12050 PF02683 Cytochrome C biogenesis protein transmembrane region ISN38_12050 PF11412 Disulphide bond corrector protein DsbC ISN38_12055 PF03091 CutA1 divalent ion tolerance protein ISN38_12065 PF00166 Chaperonin 10 Kd subunit ISN38_12070 PF00118 TCP-1/cpn60 chaperonin family ISN38_12075 PF00793 DAHP synthetase I family ISN38_12080 PF01541 GIY-YIG catalytic domain ISN38_12085 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ISN38_12085 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ISN38_12095 PF08335 GlnD PII-uridylyltransferase ISN38_12095 PF03710 Glutamate-ammonia ligase adenylyltransferase ISN38_12110 PF03009 Glycerophosphoryl diester phosphodiesterase family ISN38_12135 PF00881 Nitroreductase family ISN38_12140 PF04264 YceI-like domain ISN38_12155 PF02743 Cache domain ISN38_12155 PF00672 HAMP domain ISN38_12155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_12160 PF00456 Transketolase, thiamine diphosphate binding domain ISN38_12160 PF17831 Pyruvate dehydrogenase E1 component middle domain ISN38_12175 PF01936 NYN domain ISN38_12175 PF09722 Protein of unknown function (DUF2384) ISN38_12180 PF03852 DNA mismatch endonuclease Vsr ISN38_12195 PF00145 C-5 cytosine-specific DNA methylase ISN38_12250 PF17189 Glycosyl hydrolase family 30 beta sandwich domain ISN38_12255 PF02449 Beta-galactosidase ISN38_12255 PF08533 Beta-galactosidase C-terminal domain ISN38_12255 PF08532 Beta-galactosidase trimerisation domain ISN38_12260 PF07759 Protein of unknown function (DUF1615) ISN38_12275 PF00892 EamA-like transporter family ISN38_12280 PF00324 Amino acid permease ISN38_12285 PF01544 CorA-like Mg2+ transporter protein ISN38_12295 PF12833 Helix-turn-helix domain ISN38_12295 PF06719 AraC-type transcriptional regulator N-terminus ISN38_12310 PF01464 Transglycosylase SLT domain ISN38_12315 PF01204 Trehalase ISN38_12325 PF00553 Cellulose binding domain ISN38_12325 PF00150 Cellulase (glycosyl hydrolase family 5) ISN38_12335 PF13520 Amino acid permease ISN38_12360 PF06580 Histidine kinase ISN38_12360 PF07694 5TMR of 5TMR-LYT ISN38_12365 PF04397 LytTr DNA-binding domain ISN38_12365 PF00072 Response regulator receiver domain ISN38_12380 PF00593 TonB dependent receptor ISN38_12380 PF07715 TonB-dependent Receptor Plug Domain ISN38_12390 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISN38_12400 PF00892 EamA-like transporter family ISN38_12410 PF13649 Methyltransferase domain ISN38_12415 PF00535 Glycosyl transferase family 2 ISN38_12420 PF08889 WbqC-like protein family ISN38_12440 PF00563 EAL domain ISN38_12440 PF00990 Diguanylate cyclase, GGDEF domain ISN38_12440 PF08447 PAS fold ISN38_12440 PF08448 PAS fold ISN38_12445 PF00355 Rieske [2Fe-2S] domain ISN38_12450 PF17151 Periplasmic sensor domain ISN38_12450 PF00990 Diguanylate cyclase, GGDEF domain ISN38_12470 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ISN38_12475 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISN38_12475 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISN38_12485 PF00248 Aldo/keto reductase family ISN38_12500 PF03358 NADPH-dependent FMN reductase ISN38_12505 PF03466 LysR substrate binding domain ISN38_12505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN38_12510 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISN38_12520 PF03167 Uracil DNA glycosylase superfamily ISN38_12525 PF02469 Fasciclin domain ISN38_12530 PF05711 Macrocin-O-methyltransferase (TylF) ISN38_12535 PF00999 Sodium/hydrogen exchanger family ISN38_12540 PF00005 ABC transporter ISN38_12545 PF01061 ABC-2 type transporter ISN38_12590 PF00691 OmpA family ISN38_12590 PF13677 Membrane MotB of proton-channel complex MotA/MotB ISN38_12595 PF01618 MotA/TolQ/ExbB proton channel family ISN38_12600 PF01641 SelR domain ISN38_12615 PF01037 Lrp/AsnC ligand binding domain ISN38_12620 PF01266 FAD dependent oxidoreductase ISN38_12625 PF00842 Alanine racemase, C-terminal domain ISN38_12625 PF01168 Alanine racemase, N-terminal domain ISN38_12645 PF01627 Hpt domain ISN38_12645 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISN38_12645 PF00989 PAS fold ISN38_12645 PF00512 His Kinase A (phospho-acceptor) domain ISN38_12645 PF00072 Response regulator receiver domain ISN38_12645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_12655 PF07995 Glucose / Sorbosone dehydrogenase ISN38_12665 PF08468 Methyltransferase small domain N-terminal ISN38_12665 PF05175 Methyltransferase small domain ISN38_12670 PF01479 S4 domain ISN38_12670 PF00849 RNA pseudouridylate synthase ISN38_12680 PF04461 Protein of unknown function (DUF520) ISN38_12685 PF00892 EamA-like transporter family ISN38_12690 PF00005 ABC transporter ISN38_12690 PF09383 NIL domain ISN38_12695 PF00528 Binding-protein-dependent transport system inner membrane component ISN38_12700 PF03180 NLPA lipoprotein ISN38_12725 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISN38_12725 PF00364 Biotin-requiring enzyme ISN38_12725 PF02817 e3 binding domain ISN38_12730 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN38_12730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISN38_12745 PF00119 ATP synthase A chain ISN38_12750 PF00137 ATP synthase subunit C ISN38_12755 PF00430 ATP synthase B/B' CF(0) ISN38_12760 PF00213 ATP synthase delta (OSCP) subunit ISN38_12765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISN38_12765 PF00306 ATP synthase alpha/beta chain, C terminal domain ISN38_12765 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISN38_12770 PF00231 ATP synthase ISN38_12775 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISN38_12775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISN38_12780 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ISN38_12780 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ISN38_12795 PF12804 MobA-like NTP transferase domain ISN38_12795 PF00132 Bacterial transferase hexapeptide (six repeats) ISN38_12795 PF14602 Hexapeptide repeat of succinyl-transferase ISN38_12805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_12805 PF00512 His Kinase A (phospho-acceptor) domain ISN38_12805 PF00989 PAS fold ISN38_12810 PF02954 Bacterial regulatory protein, Fis family ISN38_12810 PF00072 Response regulator receiver domain ISN38_12810 PF00158 Sigma-54 interaction domain ISN38_12820 PF02687 FtsX-like permease family ISN38_12820 PF12704 MacB-like periplasmic core domain ISN38_12820 PF00005 ABC transporter ISN38_12825 PF12704 MacB-like periplasmic core domain ISN38_12825 PF02687 FtsX-like permease family ISN38_12825 PF00005 ABC transporter ISN38_12830 PF02687 FtsX-like permease family ISN38_12830 PF12704 MacB-like periplasmic core domain ISN38_12830 PF00005 ABC transporter ISN38_12835 PF02687 FtsX-like permease family ISN38_12835 PF00005 ABC transporter ISN38_12835 PF12704 MacB-like periplasmic core domain ISN38_12840 PF00005 ABC transporter ISN38_12845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN38_12850 PF01380 SIS domain ISN38_12860 PF05275 Copper resistance protein B precursor (CopB) ISN38_12865 PF00394 Multicopper oxidase ISN38_12865 PF07731 Multicopper oxidase ISN38_12865 PF07732 Multicopper oxidase ISN38_12875 PF09278 MerR, DNA binding ISN38_12875 PF00376 MerR family regulatory protein ISN38_12880 PF00403 Heavy-metal-associated domain ISN38_12895 PF01432 Peptidase family M3 ISN38_12905 PF00109 Beta-ketoacyl synthase, N-terminal domain ISN38_12905 PF02801 Beta-ketoacyl synthase, C-terminal domain ISN38_12910 PF07977 FabA-like domain ISN38_12915 PF11798 IMS family HHH motif ISN38_12915 PF00817 impB/mucB/samB family ISN38_12915 PF11799 impB/mucB/samB family C-terminal domain ISN38_12920 PF13419 Haloacid dehalogenase-like hydrolase ISN38_12925 PF07715 TonB-dependent Receptor Plug Domain ISN38_12925 PF00593 TonB dependent receptor ISN38_12935 PF13185 GAF domain ISN38_12950 PF01242 6-pyruvoyl tetrahydropterin synthase ISN38_12955 PF00270 DEAD/DEAH box helicase ISN38_12955 PF00271 Helicase conserved C-terminal domain ISN38_12965 PF02798 Glutathione S-transferase, N-terminal domain ISN38_12965 PF14497 Glutathione S-transferase, C-terminal domain ISN38_12970 PF00437 Type II/IV secretion system protein ISN38_12990 PF00571 CBS domain ISN38_12990 PF00291 Pyridoxal-phosphate dependent enzyme ISN38_12995 PF01053 Cys/Met metabolism PLP-dependent enzyme ISN38_13005 PF00005 ABC transporter ISN38_13010 PF00398 Ribosomal RNA adenine dimethylase ISN38_13015 PF00535 Glycosyl transferase family 2 ISN38_13020 PF00535 Glycosyl transferase family 2 ISN38_13060 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISN38_13060 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN38_13080 PF01370 NAD dependent epimerase/dehydratase family ISN38_13085 PF00106 short chain dehydrogenase ISN38_13090 PF04030 D-arabinono-1,4-lactone oxidase ISN38_13090 PF01565 FAD binding domain ISN38_13095 PF01040 UbiA prenyltransferase family ISN38_13105 PF00766 Electron transfer flavoprotein FAD-binding domain ISN38_13105 PF01012 Electron transfer flavoprotein domain ISN38_13110 PF01012 Electron transfer flavoprotein domain ISN38_13115 PF16363 GDP-mannose 4,6 dehydratase ISN38_13120 PF00483 Nucleotidyl transferase ISN38_13125 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ISN38_13130 PF04321 RmlD substrate binding domain ISN38_13135 PF00483 Nucleotidyl transferase ISN38_13135 PF01050 Mannose-6-phosphate isomerase ISN38_13140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISN38_13140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISN38_13140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISN38_13140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISN38_13145 PF01144 Coenzyme A transferase ISN38_13150 PF01144 Coenzyme A transferase ISN38_13155 PF14307 Glycosyltransferase WbsX ISN38_13155 PF05045 Rhamnan synthesis protein F ISN38_13175 PF02470 MlaD protein ISN38_13175 PF03886 ABC-type transport auxiliary lipoprotein component ISN38_13180 PF00005 ABC transporter ISN38_13185 PF02405 Permease MlaE ISN38_13195 PF00816 H-NS histone family ISN38_13200 PF03129 Anticodon binding domain ISN38_13200 PF04073 Aminoacyl-tRNA editing domain ISN38_13200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISN38_13210 PF01066 CDP-alcohol phosphatidyltransferase ISN38_13230 PF08264 Anticodon-binding domain of tRNA ISN38_13230 PF10458 Valyl tRNA synthetase tRNA binding arm ISN38_13230 PF00133 tRNA synthetases class I (I, L, M and V) ISN38_13245 PF04364 DNA polymerase III chi subunit, HolC ISN38_13250 PF02789 Cytosol aminopeptidase family, N-terminal domain ISN38_13250 PF00883 Cytosol aminopeptidase family, catalytic domain ISN38_13275 PF02899 Phage integrase, N-terminal SAM-like domain ISN38_13275 PF00589 Phage integrase family ISN38_13280 PF13098 Thioredoxin-like domain ISN38_13280 PF10411 Disulfide bond isomerase protein N-terminus ISN38_13285 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ISN38_13285 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ISN38_13285 PF02769 AIR synthase related protein, C-terminal domain ISN38_13290 PF02203 Tar ligand binding domain homologue ISN38_13290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_13290 PF00672 HAMP domain ISN38_13300 PF03895 YadA-like membrane anchor domain ISN38_13300 PF05658 Head domain of trimeric autotransporter adhesin ISN38_13300 PF05662 Coiled stalk of trimeric autotransporter adhesin ISN38_13300 PF13018 Extended Signal Peptide of Type V secretion system ISN38_13305 PF00082 Subtilase family ISN38_13305 PF04151 Bacterial pre-peptidase C-terminal domain ISN38_13310 PF00437 Type II/IV secretion system protein ISN38_13310 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISN38_13315 PF00482 Type II secretion system (T2SS), protein F ISN38_13320 PF08334 Type II secretion system (T2SS), protein G ISN38_13325 PF12019 Type II transport protein GspH ISN38_13330 PF07963 Prokaryotic N-terminal methylation motif ISN38_13340 PF03934 Type II secretion system (T2SS), protein K ISN38_13345 PF05137 Fimbrial assembly protein (PilN) ISN38_13350 PF10741 Type II secretion system (T2SS), protein M subtype b ISN38_13360 PF00263 Bacterial type II and III secretion system protein ISN38_13360 PF03958 Bacterial type II/III secretion system short domain ISN38_13370 PF00392 Bacterial regulatory proteins, gntR family ISN38_13370 PF07702 UTRA domain ISN38_13380 PF00593 TonB dependent receptor ISN38_13380 PF07715 TonB-dependent Receptor Plug Domain ISN38_13415 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ISN38_13415 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ISN38_13425 PF02350 UDP-N-acetylglucosamine 2-epimerase ISN38_13435 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISN38_13435 PF13632 Glycosyl transferase family group 2 ISN38_13465 PF01327 Polypeptide deformylase ISN38_13470 PF12848 ABC transporter ISN38_13470 PF00005 ABC transporter ISN38_13475 PF07690 Major Facilitator Superfamily ISN38_13500 PF00464 Serine hydroxymethyltransferase ISN38_13505 PF03477 ATP cone domain ISN38_13515 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISN38_13515 PF01872 RibD C-terminal domain ISN38_13520 PF00677 Lumazine binding domain ISN38_13525 PF00925 GTP cyclohydrolase II ISN38_13525 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ISN38_13530 PF00885 6,7-dimethyl-8-ribityllumazine synthase ISN38_13535 PF01029 NusB family ISN38_13540 PF02769 AIR synthase related protein, C-terminal domain ISN38_13540 PF00586 AIR synthase related protein, N-terminal domain ISN38_13565 PF03814 Potassium-transporting ATPase A subunit ISN38_13575 PF02669 K+-transporting ATPase, c chain ISN38_13580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_13580 PF00512 His Kinase A (phospho-acceptor) domain ISN38_13580 PF02702 Osmosensitive K+ channel His kinase sensor domain ISN38_13580 PF13492 GAF domain ISN38_13580 PF13493 Domain of unknown function (DUF4118) ISN38_13585 PF00072 Response regulator receiver domain ISN38_13585 PF00486 Transcriptional regulatory protein, C terminal ISN38_13590 PF01565 FAD binding domain ISN38_13590 PF02913 FAD linked oxidases, C-terminal domain ISN38_13600 PF02021 Uncharacterised protein family UPF0102 ISN38_13610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISN38_13635 PF02381 MraZ protein, putative antitoxin-like ISN38_13640 PF01795 MraW methylase family ISN38_13645 PF04999 Cell division protein FtsL ISN38_13650 PF03717 Penicillin-binding Protein dimerisation domain ISN38_13650 PF00905 Penicillin binding protein transpeptidase domain ISN38_13655 PF08245 Mur ligase middle domain ISN38_13655 PF01225 Mur ligase family, catalytic domain ISN38_13655 PF02875 Mur ligase family, glutamate ligase domain ISN38_13660 PF02875 Mur ligase family, glutamate ligase domain ISN38_13660 PF01225 Mur ligase family, catalytic domain ISN38_13660 PF08245 Mur ligase middle domain ISN38_13665 PF00953 Glycosyl transferase family 4 ISN38_13670 PF01098 Cell cycle protein ISN38_13675 PF04101 Glycosyltransferase family 28 C-terminal domain ISN38_13675 PF03033 Glycosyltransferase family 28 N-terminal domain ISN38_13680 PF01225 Mur ligase family, catalytic domain ISN38_13680 PF02875 Mur ligase family, glutamate ligase domain ISN38_13680 PF08245 Mur ligase middle domain ISN38_13685 PF07478 D-ala D-ala ligase C-terminus ISN38_13685 PF01820 D-ala D-ala ligase N-terminus ISN38_13690 PF03799 Cell division protein FtsQ ISN38_13690 PF08478 POTRA domain, FtsQ-type ISN38_13695 PF02491 SHS2 domain inserted in FTSA ISN38_13700 PF00091 Tubulin/FtsZ family, GTPase domain ISN38_13700 PF12327 FtsZ family, C-terminal domain ISN38_13705 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ISN38_13715 PF01551 Peptidase family M23 ISN38_13715 PF08525 Opacity-associated protein A N-terminal motif ISN38_13715 PF01476 LysM domain ISN38_13720 PF01043 SecA preprotein cross-linking domain ISN38_13720 PF07516 SecA Wing and Scaffold domain ISN38_13720 PF07517 SecA DEAD-like domain ISN38_13720 PF02810 SEC-C motif ISN38_13730 PF00293 NUDIX domain ISN38_13740 PF02219 Methylenetetrahydrofolate reductase ISN38_13765 PF13649 Methyltransferase domain ISN38_13770 PF05221 S-adenosyl-L-homocysteine hydrolase ISN38_13770 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ISN38_13775 PF00311 Phosphoenolpyruvate carboxylase ISN38_13800 PF00328 Histidine phosphatase superfamily (branch 2) ISN38_13805 PF02773 S-adenosylmethionine synthetase, C-terminal domain ISN38_13805 PF00438 S-adenosylmethionine synthetase, N-terminal domain ISN38_13805 PF02772 S-adenosylmethionine synthetase, central domain ISN38_13820 PF01370 NAD dependent epimerase/dehydratase family ISN38_13820 PF08338 Domain of unknown function (DUF1731) ISN38_13830 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ISN38_13830 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISN38_13835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISN38_13835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISN38_13840 PF04972 BON domain ISN38_13850 PF00989 PAS fold ISN38_13850 PF00512 His Kinase A (phospho-acceptor) domain ISN38_13850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_13855 PF00072 Response regulator receiver domain ISN38_13860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_13860 PF00512 His Kinase A (phospho-acceptor) domain ISN38_13870 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ISN38_13900 PF00703 Glycosyl hydrolases family 2 ISN38_13900 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ISN38_13900 PF02837 Glycosyl hydrolases family 2, sugar binding domain ISN38_13900 PF16355 Domain of unknown function (DUF4982) ISN38_13900 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 ISN38_13915 PF00392 Bacterial regulatory proteins, gntR family ISN38_13915 PF07702 UTRA domain ISN38_13920 PF07690 Major Facilitator Superfamily ISN38_13925 PF00356 Bacterial regulatory proteins, lacI family ISN38_13930 PF01380 SIS domain ISN38_13935 PF01979 Amidohydrolase family ISN38_13940 PF01743 Poly A polymerase head domain ISN38_13940 PF12627 Probable RNA and SrmB- binding site of polymerase A ISN38_13940 PF01966 HD domain ISN38_13945 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ISN38_13945 PF01464 Transglycosylase SLT domain ISN38_13950 PF07715 TonB-dependent Receptor Plug Domain ISN38_13950 PF00593 TonB dependent receptor ISN38_13965 PF01323 DSBA-like thioredoxin domain ISN38_13970 PF01323 DSBA-like thioredoxin domain ISN38_13975 PF00034 Cytochrome c ISN38_13980 PF01926 50S ribosome-binding GTPase ISN38_14000 PF04107 Glutamate-cysteine ligase family 2(GCS2) ISN38_14020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_14020 PF16527 Two-component sensor protein CpxA, periplasmic domain ISN38_14020 PF00512 His Kinase A (phospho-acceptor) domain ISN38_14020 PF00672 HAMP domain ISN38_14025 PF00072 Response regulator receiver domain ISN38_14025 PF00486 Transcriptional regulatory protein, C terminal ISN38_14030 PF02583 Metal-sensitive transcriptional repressor ISN38_14035 PF08240 Alcohol dehydrogenase GroES-like domain ISN38_14035 PF00107 Zinc-binding dehydrogenase ISN38_14040 PF04828 Glutathione-dependent formaldehyde-activating enzyme ISN38_14045 PF00756 Putative esterase ISN38_14055 PF02567 Phenazine biosynthesis-like protein ISN38_14080 PF01979 Amidohydrolase family ISN38_14080 PF00449 Urease alpha-subunit, N-terminal domain ISN38_14085 PF01979 Amidohydrolase family ISN38_14105 PF00462 Glutaredoxin ISN38_14110 PF01522 Polysaccharide deacetylase ISN38_14130 PF00155 Aminotransferase class I and II ISN38_14135 PF03193 RsgA GTPase ISN38_14150 PF00128 Alpha amylase, catalytic domain ISN38_14165 PF00356 Bacterial regulatory proteins, lacI family ISN38_14170 PF00106 short chain dehydrogenase ISN38_14175 PF03600 Citrate transporter ISN38_14185 PF00072 Response regulator receiver domain ISN38_14185 PF00486 Transcriptional regulatory protein, C terminal ISN38_14190 PF00512 His Kinase A (phospho-acceptor) domain ISN38_14190 PF08521 Two-component sensor kinase N-terminal ISN38_14190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_14200 PF00196 Bacterial regulatory proteins, luxR family ISN38_14200 PF00072 Response regulator receiver domain ISN38_14210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_14210 PF00512 His Kinase A (phospho-acceptor) domain ISN38_14220 PF00375 Sodium:dicarboxylate symporter family ISN38_14225 PF01515 Phosphate acetyl/butaryl transferase ISN38_14225 PF00390 Malic enzyme, N-terminal domain ISN38_14225 PF03949 Malic enzyme, NAD binding domain ISN38_14240 PF00529 HlyD membrane-fusion protein of T1SS ISN38_14300 PF03279 Bacterial lipid A biosynthesis acyltransferase ISN38_14305 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ISN38_14310 PF02321 Outer membrane efflux protein ISN38_14325 PF00990 Diguanylate cyclase, GGDEF domain ISN38_14330 PF00180 Isocitrate/isopropylmalate dehydrogenase ISN38_14335 PF00694 Aconitase C-terminal domain ISN38_14345 PF00330 Aconitase family (aconitate hydratase) ISN38_14355 PF00682 HMGL-like ISN38_14355 PF08502 LeuA allosteric (dimerisation) domain ISN38_14360 PF00291 Pyridoxal-phosphate dependent enzyme ISN38_14370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISN38_14370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISN38_14370 PF00205 Thiamine pyrophosphate enzyme, central domain ISN38_14375 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ISN38_14375 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ISN38_14380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_14380 PF00672 HAMP domain ISN38_14385 PF13667 ThiC-associated domain ISN38_14385 PF01964 Radical SAM ThiC family ISN38_14400 PF00719 Inorganic pyrophosphatase ISN38_14410 PF03030 Inorganic H+ pyrophosphatase ISN38_14420 PF00365 Phosphofructokinase ISN38_14430 PF08245 Mur ligase middle domain ISN38_14430 PF01225 Mur ligase family, catalytic domain ISN38_14430 PF02875 Mur ligase family, glutamate ligase domain ISN38_14440 PF01569 PAP2 superfamily ISN38_14455 PF00480 ROK family ISN38_14465 PF00202 Aminotransferase class-III ISN38_14475 PF00034 Cytochrome c ISN38_14475 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ISN38_14495 PF00196 Bacterial regulatory proteins, luxR family ISN38_14495 PF00072 Response regulator receiver domain ISN38_14505 PF00202 Aminotransferase class-III ISN38_14515 PF02581 Thiamine monophosphate synthase ISN38_14520 PF00301 Rubredoxin ISN38_14525 PF13369 Transglutaminase-like superfamily ISN38_14535 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISN38_14545 PF01812 5-formyltetrahydrofolate cyclo-ligase family ISN38_14555 PF05164 Cell division protein ZapA ISN38_14565 PF00563 EAL domain ISN38_14565 PF03707 Bacterial signalling protein N terminal repeat ISN38_14565 PF00990 Diguanylate cyclase, GGDEF domain ISN38_14570 PF03695 Uncharacterised protein family (UPF0149) ISN38_14575 PF00557 Metallopeptidase family M24 ISN38_14575 PF05195 Aminopeptidase P, N-terminal domain ISN38_14580 PF00557 Metallopeptidase family M24 ISN38_14595 PF17092 Penicillin-binding protein OB-like domain ISN38_14595 PF00912 Transglycosylase ISN38_14595 PF00905 Penicillin binding protein transpeptidase domain ISN38_14600 PF11104 Type IV pilus assembly protein PilM; ISN38_14610 PF04350 Pilus assembly protein, PilO ISN38_14615 PF04351 Pilus assembly protein, PilP ISN38_14620 PF07660 Secretin and TonB N terminus short domain ISN38_14620 PF03958 Bacterial type II/III secretion system short domain ISN38_14620 PF00263 Bacterial type II and III secretion system protein ISN38_14620 PF11741 AMIN domain ISN38_14625 PF07726 ATPase family associated with various cellular activities (AAA) ISN38_14625 PF17863 AAA lid domain ISN38_14630 PF01882 Protein of unknown function DUF58 ISN38_14640 PF13519 von Willebrand factor type A domain ISN38_14655 PF00375 Sodium:dicarboxylate symporter family ISN38_14660 PF00456 Transketolase, thiamine diphosphate binding domain ISN38_14660 PF02780 Transketolase, C-terminal domain ISN38_14660 PF02779 Transketolase, pyrimidine binding domain ISN38_14685 PF04225 Opacity-associated protein A LysM-like domain ISN38_14685 PF01551 Peptidase family M23 ISN38_14690 PF03734 L,D-transpeptidase catalytic domain ISN38_14690 PF01476 LysM domain ISN38_14715 PF03459 TOBE domain ISN38_14715 PF00005 ABC transporter ISN38_14720 PF00528 Binding-protein-dependent transport system inner membrane component ISN38_14730 PF00753 Metallo-beta-lactamase superfamily ISN38_14735 PF01022 Bacterial regulatory protein, arsR family ISN38_14750 PF03922 OmpW family ISN38_14755 PF03922 OmpW family ISN38_14760 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISN38_14760 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISN38_14780 PF00672 HAMP domain ISN38_14780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_14795 PF00162 Phosphoglycerate kinase ISN38_14800 PF13419 Haloacid dehalogenase-like hydrolase ISN38_14805 PF02887 Pyruvate kinase, alpha/beta domain ISN38_14805 PF00224 Pyruvate kinase, barrel domain ISN38_14810 PF00274 Fructose-bisphosphate aldolase class-I ISN38_14815 PF01661 Macro domain ISN38_14830 PF01156 Inosine-uridine preferring nucleoside hydrolase ISN38_14850 PF01546 Peptidase family M20/M25/M40 ISN38_14850 PF07687 Peptidase dimerisation domain ISN38_14855 PF00266 Aminotransferase class-V ISN38_14865 PF00291 Pyridoxal-phosphate dependent enzyme ISN38_14870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISN38_14870 PF14824 Sirohaem biosynthesis protein central ISN38_14870 PF10414 Sirohaem synthase dimerisation region ISN38_14875 PF03466 LysR substrate binding domain ISN38_14875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN38_14885 PF00072 Response regulator receiver domain ISN38_14885 PF00672 HAMP domain ISN38_14885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_14885 PF00512 His Kinase A (phospho-acceptor) domain ISN38_14885 PF01627 Hpt domain ISN38_14890 PF03960 ArsC family ISN38_14920 PF01507 Phosphoadenosine phosphosulfate reductase family ISN38_14925 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISN38_14925 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISN38_14930 PF00175 Oxidoreductase NAD-binding domain ISN38_14930 PF00667 FAD binding domain ISN38_14930 PF00258 Flavodoxin ISN38_14935 PF01507 Phosphoadenosine phosphosulfate reductase family ISN38_14940 PF00009 Elongation factor Tu GTP binding domain ISN38_14945 PF00672 HAMP domain ISN38_14945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_14945 PF02203 Tar ligand binding domain homologue ISN38_14965 PF01235 Sodium:alanine symporter family ISN38_14980 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISN38_14980 PF00588 SpoU rRNA Methylase family ISN38_15000 PF00356 Bacterial regulatory proteins, lacI family ISN38_15010 PF01741 Large-conductance mechanosensitive channel, MscL ISN38_15015 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISN38_15030 PF02080 TrkA-C domain ISN38_15030 PF03600 Citrate transporter ISN38_15035 PF02390 Putative methyltransferase ISN38_15040 PF05690 Thiazole biosynthesis protein ThiG ISN38_15045 PF02597 ThiS family ISN38_15045 PF05690 Thiazole biosynthesis protein ThiG ISN38_15065 PF00120 Glutamine synthetase, catalytic domain ISN38_15070 PF04204 Homoserine O-succinyltransferase ISN38_15075 PF01810 LysE type translocator ISN38_15080 PF07722 Peptidase C26 ISN38_15090 PF01053 Cys/Met metabolism PLP-dependent enzyme ISN38_15095 PF00266 Aminotransferase class-V ISN38_15120 PF05506 Domain of unknown function (DUF756) ISN38_15120 PF04185 Phosphoesterase family ISN38_15125 PF00593 TonB dependent receptor ISN38_15125 PF07660 Secretin and TonB N terminus short domain ISN38_15125 PF07715 TonB-dependent Receptor Plug Domain ISN38_15130 PF18030 RimK PreATP-grasp domain ISN38_15130 PF08443 RimK-like ATP-grasp domain ISN38_15140 PF00486 Transcriptional regulatory protein, C terminal ISN38_15140 PF00072 Response regulator receiver domain ISN38_15145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_15145 PF11808 Phosphate regulon sensor protein PhoR ISN38_15145 PF00989 PAS fold ISN38_15145 PF00512 His Kinase A (phospho-acceptor) domain ISN38_15150 PF01121 Dephospho-CoA kinase ISN38_15155 PF01478 Type IV leader peptidase family ISN38_15155 PF06750 Bacterial Peptidase A24 N-terminal domain ISN38_15160 PF00482 Type II secretion system (T2SS), protein F ISN38_15165 PF07963 Prokaryotic N-terminal methylation motif ISN38_15165 PF00114 Pilin (bacterial filament) ISN38_15170 PF00114 Pilin (bacterial filament) ISN38_15170 PF07963 Prokaryotic N-terminal methylation motif ISN38_15175 PF00437 Type II/IV secretion system protein ISN38_15175 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISN38_15190 PF02954 Bacterial regulatory protein, Fis family ISN38_15190 PF00072 Response regulator receiver domain ISN38_15190 PF00158 Sigma-54 interaction domain ISN38_15195 PF00512 His Kinase A (phospho-acceptor) domain ISN38_15195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_15200 PF00549 CoA-ligase ISN38_15200 PF08442 ATP-grasp domain ISN38_15205 PF02629 CoA binding domain ISN38_15205 PF00549 CoA-ligase ISN38_15225 PF00795 Carbon-nitrogen hydrolase ISN38_15225 PF02540 NAD synthase ISN38_15235 PF12867 DinB superfamily ISN38_15235 PF03781 Sulfatase-modifying factor enzyme 1 ISN38_15240 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ISN38_15255 PF00528 Binding-protein-dependent transport system inner membrane component ISN38_15260 PF00005 ABC transporter ISN38_15270 PF13525 Outer membrane lipoprotein ISN38_15275 PF00849 RNA pseudouridylate synthase ISN38_15280 PF02578 Multi-copper polyphenol oxidoreductase laccase ISN38_15295 PF01011 PQQ enzyme repeat ISN38_15305 PF00982 Glycosyltransferase family 20 ISN38_15310 PF00723 Glycosyl hydrolases family 15 ISN38_15315 PF02358 Trehalose-phosphatase ISN38_15325 PF07715 TonB-dependent Receptor Plug Domain ISN38_15325 PF00593 TonB dependent receptor ISN38_15360 PF02861 Clp amino terminal domain, pathogenicity island component ISN38_15360 PF17871 AAA lid domain ISN38_15360 PF07724 AAA domain (Cdc48 subfamily) ISN38_15360 PF10431 C-terminal, D2-small domain, of ClpB protein ISN38_15360 PF00004 ATPase family associated with various cellular activities (AAA) ISN38_15375 PF01053 Cys/Met metabolism PLP-dependent enzyme ISN38_15380 PF07769 psiF repeat ISN38_15385 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISN38_15385 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ISN38_15390 PF06276 Ferric iron reductase FhuF-like transporter ISN38_15390 PF04183 IucA / IucC family ISN38_15395 PF07690 Major Facilitator Superfamily ISN38_15400 PF04183 IucA / IucC family ISN38_15400 PF06276 Ferric iron reductase FhuF-like transporter ISN38_15410 PF00593 TonB dependent receptor ISN38_15410 PF07660 Secretin and TonB N terminus short domain ISN38_15410 PF07715 TonB-dependent Receptor Plug Domain ISN38_15420 PF00999 Sodium/hydrogen exchanger family ISN38_15420 PF02254 TrkA-N domain ISN38_15435 PF00593 TonB dependent receptor ISN38_15435 PF07715 TonB-dependent Receptor Plug Domain ISN38_15445 PF02534 Type IV secretory system Conjugative DNA transfer ISN38_15455 PF00561 alpha/beta hydrolase fold ISN38_15470 PF00293 NUDIX domain ISN38_15475 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISN38_15475 PF01612 3'-5' exonuclease ISN38_15475 PF01367 5'-3' exonuclease, C-terminal SAM fold ISN38_15475 PF00476 DNA polymerase family A ISN38_15495 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ISN38_15495 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ISN38_15515 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ISN38_15520 PF02233 NAD(P) transhydrogenase beta subunit ISN38_15535 PF01063 Amino-transferase class IV ISN38_15540 PF04151 Bacterial pre-peptidase C-terminal domain ISN38_15540 PF00082 Subtilase family ISN38_15550 PF04073 Aminoacyl-tRNA editing domain ISN38_15565 PF03358 NADPH-dependent FMN reductase ISN38_15570 PF03631 Virulence factor BrkB ISN38_15575 PF08534 Redoxin ISN38_15580 PF00708 Acylphosphatase ISN38_15585 PF03976 Polyphosphate kinase 2 (PPK2) ISN38_15595 PF00994 Probable molybdopterin binding domain ISN38_15660 PF03377 TAL effector repeat ISN38_15670 PF03377 TAL effector repeat ISN38_15675 PF04717 Type VI secretion system, phage-baseplate injector ISN38_15685 PF05593 RHS Repeat ISN38_15685 PF14220 Domain of unknown function (DUF4329) ISN38_15685 PF03527 RHS protein ISN38_15695 PF05593 RHS Repeat ISN38_15695 PF03527 RHS protein ISN38_15695 PF15606 Bacterial toxin 34 ISN38_15720 PF06744 Type VI secretion protein IcmF C-terminal ISN38_15720 PF06761 Intracellular multiplication and human macrophage-killing ISN38_15720 PF14331 ImcF-related N-terminal domain ISN38_15730 PF00691 OmpA family ISN38_15730 PF04972 BON domain ISN38_15740 PF05360 yiaA/B two helix domain ISN38_15745 PF04717 Type VI secretion system, phage-baseplate injector ISN38_15745 PF06715 Gp5 C-terminal repeat (3 copies) ISN38_15830 PF00182 Chitinase class I ISN38_15875 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISN38_15880 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISN38_15895 PF05947 Type VI secretion system, TssF ISN38_15905 PF10431 C-terminal, D2-small domain, of ClpB protein ISN38_15905 PF17871 AAA lid domain ISN38_15905 PF07724 AAA domain (Cdc48 subfamily) ISN38_15905 PF00004 ATPase family associated with various cellular activities (AAA) ISN38_15915 PF04717 Type VI secretion system, phage-baseplate injector ISN38_15990 PF01301 Glycosyl hydrolases family 35 ISN38_16000 PF17678 Glycosyl hydrolase family 92 N-terminal domain ISN38_16000 PF07971 Glycosyl hydrolase family 92 ISN38_16020 PF00933 Glycosyl hydrolase family 3 N terminal domain ISN38_16020 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISN38_16020 PF07691 PA14 domain ISN38_16020 PF14310 Fibronectin type III-like domain ISN38_16030 PF00728 Glycosyl hydrolase family 20, catalytic domain ISN38_16030 PF02838 Glycosyl hydrolase family 20, domain 2 ISN38_16030 PF07691 PA14 domain ISN38_16035 PF01476 LysM domain ISN38_16035 PF00704 Glycosyl hydrolases family 18 ISN38_16050 PF02685 Glucokinase ISN38_16060 PF04452 RNA methyltransferase ISN38_16065 PF00202 Aminotransferase class-III ISN38_16070 PF00293 NUDIX domain ISN38_16075 PF00459 Inositol monophosphatase family ISN38_16080 PF03819 MazG nucleotide pyrophosphohydrolase domain ISN38_16085 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ISN38_16095 PF16200 C-terminal region of band_7 ISN38_16095 PF01145 SPFH domain / Band 7 family ISN38_16105 PF01571 Aminomethyltransferase folate-binding domain ISN38_16105 PF08669 Glycine cleavage T-protein C-terminal barrel domain ISN38_16110 PF01597 Glycine cleavage H-protein ISN38_16140 PF00732 GMC oxidoreductase ISN38_16140 PF05199 GMC oxidoreductase ISN38_16160 PF00067 Cytochrome P450 ISN38_16165 PF00067 Cytochrome P450 ISN38_16170 PF00067 Cytochrome P450 ISN38_16185 PF00067 Cytochrome P450 ISN38_16190 PF00348 Polyprenyl synthetase ISN38_16205 PF01070 FMN-dependent dehydrogenase ISN38_16210 PF09317 Domain of unknown function (DUF1974) ISN38_16210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISN38_16210 PF02770 Acyl-CoA dehydrogenase, middle domain ISN38_16210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISN38_16220 PF00440 Bacterial regulatory proteins, tetR family ISN38_16240 PF07715 TonB-dependent Receptor Plug Domain ISN38_16240 PF00593 TonB dependent receptor ISN38_16250 PF01430 Hsp33 protein ISN38_16255 PF00912 Transglycosylase ISN38_16260 PF00535 Glycosyl transferase family 2 ISN38_16265 PF00571 CBS domain ISN38_16270 PF05170 AsmA family ISN38_16275 PF03006 Haemolysin-III related ISN38_16280 PF16658 Class II release factor RF3, C-terminal domain ISN38_16280 PF00009 Elongation factor Tu GTP binding domain ISN38_16290 PF00561 alpha/beta hydrolase fold ISN38_16295 PF01053 Cys/Met metabolism PLP-dependent enzyme ISN38_16300 PF00696 Amino acid kinase family ISN38_16300 PF00742 Homoserine dehydrogenase ISN38_16300 PF03447 Homoserine dehydrogenase, NAD binding domain ISN38_16305 PF08386 TAP-like protein ISN38_16305 PF00561 alpha/beta hydrolase fold ISN38_16310 PF00990 Diguanylate cyclase, GGDEF domain ISN38_16315 PF03313 Serine dehydratase alpha chain ISN38_16315 PF03315 Serine dehydratase beta chain ISN38_16330 PF01292 Prokaryotic cytochrome b561 ISN38_16340 PF17149 Periplasmic sensor domain found in signal transduction proteins ISN38_16340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_16340 PF00512 His Kinase A (phospho-acceptor) domain ISN38_16340 PF01627 Hpt domain ISN38_16340 PF00072 Response regulator receiver domain ISN38_16340 PF00672 HAMP domain ISN38_16345 PF00672 HAMP domain ISN38_16345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_16345 PF00512 His Kinase A (phospho-acceptor) domain ISN38_16345 PF01627 Hpt domain ISN38_16345 PF00072 Response regulator receiver domain ISN38_16345 PF17149 Periplasmic sensor domain found in signal transduction proteins ISN38_16350 PF07690 Major Facilitator Superfamily ISN38_16355 PF01208 Uroporphyrinogen decarboxylase (URO-D) ISN38_16365 PF13533 Biotin-lipoyl like ISN38_16370 PF00873 AcrB/AcrD/AcrF family ISN38_16375 PF02321 Outer membrane efflux protein ISN38_16380 PF01761 3-dehydroquinate synthase ISN38_16385 PF01202 Shikimate kinase ISN38_16390 PF01243 Pyridoxamine 5'-phosphate oxidase ISN38_16390 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ISN38_16395 PF00583 Acetyltransferase (GNAT) family ISN38_16405 PF07690 Major Facilitator Superfamily ISN38_16410 PF09278 MerR, DNA binding ISN38_16410 PF00376 MerR family regulatory protein ISN38_16420 PF03807 NADP oxidoreductase coenzyme F420-dependent ISN38_16420 PF14748 Pyrroline-5-carboxylate reductase dimerisation ISN38_16430 PF01168 Alanine racemase, N-terminal domain ISN38_16435 PF00437 Type II/IV secretion system protein ISN38_16440 PF00437 Type II/IV secretion system protein ISN38_16445 PF13673 Acetyltransferase (GNAT) domain ISN38_16445 PF13302 Acetyltransferase (GNAT) domain ISN38_16445 PF03352 Methyladenine glycosylase ISN38_16445 PF00958 GMP synthase C terminal domain ISN38_16445 PF00117 Glutamine amidotransferase class-I ISN38_16455 PF02622 Uncharacterized ACR, COG1678 ISN38_16460 PF03652 Holliday junction resolvase ISN38_16465 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISN38_16465 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISN38_16485 PF00672 HAMP domain ISN38_16485 PF02203 Tar ligand binding domain homologue ISN38_16485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_16495 PF00324 Amino acid permease ISN38_16500 PF03600 Citrate transporter ISN38_16515 PF00571 CBS domain ISN38_16515 PF01769 Divalent cation transporter ISN38_16515 PF03448 MgtE intracellular N domain ISN38_16520 PF00391 PEP-utilising enzyme, mobile domain ISN38_16520 PF05524 PEP-utilising enzyme, N-terminal ISN38_16520 PF02896 PEP-utilising enzyme, TIM barrel domain ISN38_16525 PF00381 PTS HPr component phosphorylation site ISN38_16535 PF03668 P-loop ATPase protein family ISN38_16540 PF02603 HPr Serine kinase N terminus ISN38_16540 PF07475 HPr Serine kinase C-terminal domain ISN38_16545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISN38_16550 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ISN38_16555 PF04552 Sigma-54, DNA binding domain ISN38_16555 PF04963 Sigma-54 factor, core binding domain ISN38_16555 PF00309 Sigma-54 factor, Activator interacting domain (AID) ISN38_16560 PF00005 ABC transporter ISN38_16580 PF01380 SIS domain ISN38_16580 PF00571 CBS domain ISN38_16590 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISN38_16620 PF00551 Formyl transferase ISN38_16635 PF02769 AIR synthase related protein, C-terminal domain ISN38_16635 PF00586 AIR synthase related protein, N-terminal domain ISN38_16645 PF01594 AI-2E family transporter ISN38_16650 PF00308 Bacterial dnaA protein ISN38_16655 PF00483 Nucleotidyl transferase ISN38_16660 PF01636 Phosphotransferase enzyme family ISN38_16685 PF00072 Response regulator receiver domain ISN38_16685 PF00486 Transcriptional regulatory protein, C terminal ISN38_16695 PF00175 Oxidoreductase NAD-binding domain ISN38_16695 PF00258 Flavodoxin ISN38_16695 PF00667 FAD binding domain ISN38_16700 PF02424 ApbE family ISN38_16720 PF18331 PKHD-type hydroxylase C-terminal domain ISN38_16720 PF13640 2OG-Fe(II) oxygenase superfamily ISN38_16725 PF07715 TonB-dependent Receptor Plug Domain ISN38_16725 PF00593 TonB dependent receptor ISN38_16730 PF00355 Rieske [2Fe-2S] domain ISN38_16740 PF00266 Aminotransferase class-V ISN38_16745 PF01458 Uncharacterized protein family (UPF0051) ISN38_16750 PF00005 ABC transporter ISN38_16755 PF01458 Uncharacterized protein family (UPF0051) ISN38_16770 PF01965 DJ-1/PfpI family ISN38_16785 PF01476 LysM domain ISN38_16785 PF08525 Opacity-associated protein A N-terminal motif ISN38_16785 PF01551 Peptidase family M23 ISN38_16800 PF02566 OsmC-like protein ISN38_16810 PF02567 Phenazine biosynthesis-like protein ISN38_16815 PF00696 Amino acid kinase family ISN38_16815 PF01842 ACT domain ISN38_16830 PF08245 Mur ligase middle domain ISN38_16840 PF00348 Polyprenyl synthetase ISN38_16845 PF00436 Single-strand binding protein family ISN38_16865 PF00854 POT family ISN38_16870 PF03169 OPT oligopeptide transporter protein ISN38_16875 PF00326 Prolyl oligopeptidase family ISN38_16875 PF07676 WD40-like Beta Propeller Repeat ISN38_16875 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ISN38_16895 PF13419 Haloacid dehalogenase-like hydrolase ISN38_16900 PF04328 Selenoprotein, putative ISN38_16905 PF02554 Carbon starvation protein CstA ISN38_16905 PF13722 5TM C-terminal transporter carbon starvation CstA ISN38_16920 PF04493 Endonuclease V ISN38_16925 PF00300 Histidine phosphatase superfamily (branch 1) ISN38_16935 PF07944 Beta-L-arabinofuranosidase, GH127 ISN38_16945 PF02311 AraC-like ligand binding domain ISN38_16945 PF12833 Helix-turn-helix domain ISN38_16950 PF13276 HTH-like domain ISN38_16950 PF00665 Integrase core domain ISN38_16950 PF13333 Integrase core domain ISN38_16960 PF00072 Response regulator receiver domain ISN38_16960 PF01339 CheB methylesterase ISN38_16965 PF03705 CheR methyltransferase, all-alpha domain ISN38_16965 PF01739 CheR methyltransferase, SAM binding domain ISN38_16970 PF00563 EAL domain ISN38_16970 PF00990 Diguanylate cyclase, GGDEF domain ISN38_16970 PF03707 Bacterial signalling protein N terminal repeat ISN38_16975 PF01584 CheW-like domain ISN38_16980 PF12729 Four helix bundle sensory module for signal transduction ISN38_16980 PF00672 HAMP domain ISN38_16980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_16985 PF02203 Tar ligand binding domain homologue ISN38_16985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_16985 PF00672 HAMP domain ISN38_16990 PF00672 HAMP domain ISN38_16990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_16990 PF02203 Tar ligand binding domain homologue ISN38_16995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_16995 PF02895 Signal transducing histidine kinase, homodimeric domain ISN38_16995 PF01584 CheW-like domain ISN38_16995 PF01627 Hpt domain ISN38_17005 PF03461 TRCF domain ISN38_17005 PF02559 CarD-like/TRCF domain ISN38_17005 PF00270 DEAD/DEAH box helicase ISN38_17005 PF00271 Helicase conserved C-terminal domain ISN38_17005 PF17757 UvrB interaction domain ISN38_17025 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ISN38_17035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_17035 PF00512 His Kinase A (phospho-acceptor) domain ISN38_17035 PF00672 HAMP domain ISN38_17065 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISN38_17070 PF01475 Ferric uptake regulator family ISN38_17075 PF07690 Major Facilitator Superfamily ISN38_17085 PF00082 Subtilase family ISN38_17085 PF01483 Proprotein convertase P-domain ISN38_17095 PF00561 alpha/beta hydrolase fold ISN38_17105 PF12804 MobA-like NTP transferase domain ISN38_17110 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ISN38_17110 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ISN38_17115 PF03450 CO dehydrogenase flavoprotein C-terminal domain ISN38_17115 PF00941 FAD binding domain in molybdopterin dehydrogenase ISN38_17120 PF10518 TAT (twin-arginine translocation) pathway signal sequence ISN38_17120 PF01799 [2Fe-2S] binding domain ISN38_17120 PF00111 2Fe-2S iron-sulfur cluster binding domain ISN38_17140 PF00593 TonB dependent receptor ISN38_17140 PF07715 TonB-dependent Receptor Plug Domain ISN38_17155 PF08240 Alcohol dehydrogenase GroES-like domain ISN38_17155 PF00107 Zinc-binding dehydrogenase ISN38_17160 PF00654 Voltage gated chloride channel ISN38_17170 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISN38_17170 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISN38_17175 PF02805 Metal binding domain of Ada ISN38_17175 PF00730 HhH-GPD superfamily base excision DNA repair protein ISN38_17175 PF06029 AlkA N-terminal domain ISN38_17175 PF12833 Helix-turn-helix domain ISN38_17210 PF01494 FAD binding domain ISN38_17230 PF00271 Helicase conserved C-terminal domain ISN38_17230 PF03880 DbpA RNA binding domain ISN38_17230 PF00270 DEAD/DEAH box helicase ISN38_17235 PF01479 S4 domain ISN38_17235 PF00849 RNA pseudouridylate synthase ISN38_17240 PF00990 Diguanylate cyclase, GGDEF domain ISN38_17250 PF03812 2-keto-3-deoxygluconate permease ISN38_17260 PF03737 Aldolase/RraA ISN38_17265 PF00144 Beta-lactamase ISN38_17280 PF00664 ABC transporter transmembrane region ISN38_17280 PF00005 ABC transporter ISN38_17295 PF03377 TAL effector repeat ISN38_17305 PF03377 TAL effector repeat ISN38_17385 PF03653 Uncharacterised protein family (UPF0093) ISN38_17395 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ISN38_17400 PF14579 Helix-hairpin-helix motif ISN38_17400 PF02811 PHP domain ISN38_17400 PF01336 OB-fold nucleic acid binding domain ISN38_17400 PF07733 Bacterial DNA polymerase III alpha NTPase domain ISN38_17400 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ISN38_17405 PF01351 Ribonuclease HII ISN38_17410 PF02684 Lipid-A-disaccharide synthetase ISN38_17415 PF00132 Bacterial transferase hexapeptide (six repeats) ISN38_17415 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ISN38_17420 PF07977 FabA-like domain ISN38_17425 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ISN38_17425 PF00132 Bacterial transferase hexapeptide (six repeats) ISN38_17430 PF01103 Surface antigen ISN38_17430 PF07244 Surface antigen variable number repeat ISN38_17435 PF02163 Peptidase family M50 ISN38_17435 PF17820 PDZ domain ISN38_17440 PF13288 DXP reductoisomerase C-terminal domain ISN38_17440 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ISN38_17440 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ISN38_17450 PF01255 Putative undecaprenyl diphosphate synthase ISN38_17455 PF01765 Ribosome recycling factor ISN38_17460 PF00696 Amino acid kinase family ISN38_17465 PF00990 Diguanylate cyclase, GGDEF domain ISN38_17470 PF00889 Elongation factor TS ISN38_17475 PF00318 Ribosomal protein S2 ISN38_17510 PF00557 Metallopeptidase family M24 ISN38_17515 PF08335 GlnD PII-uridylyltransferase ISN38_17515 PF01966 HD domain ISN38_17515 PF01909 Nucleotidyltransferase domain ISN38_17520 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ISN38_17520 PF14602 Hexapeptide repeat of succinyl-transferase ISN38_17520 PF00132 Bacterial transferase hexapeptide (six repeats) ISN38_17525 PF03960 ArsC family ISN38_17535 PF07687 Peptidase dimerisation domain ISN38_17535 PF01546 Peptidase family M20/M25/M40 ISN38_17545 PF00733 Asparagine synthase ISN38_17545 PF13537 Glutamine amidotransferase domain ISN38_17555 PF01804 Penicillin amidase ISN38_17560 PF00210 Ferritin-like domain ISN38_17565 PF03989 DNA gyrase C-terminal domain, beta-propeller ISN38_17565 PF00521 DNA gyrase/topoisomerase IV, subunit A ISN38_17580 PF02321 Outer membrane efflux protein ISN38_17585 PF00529 HlyD membrane-fusion protein of T1SS ISN38_17585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN38_17590 PF07690 Major Facilitator Superfamily ISN38_17615 PF06903 VirK protein ISN38_17625 PF00575 S1 RNA binding domain ISN38_17625 PF17876 Cold shock domain ISN38_17625 PF00773 RNB domain ISN38_17625 PF08461 Ribonuclease R winged-helix domain ISN38_17625 PF08206 Ribonuclease B OB domain ISN38_17635 PF00588 SpoU rRNA Methylase family ISN38_17635 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISN38_17655 PF00929 Exonuclease ISN38_17670 PF05114 Protein of unknown function (DUF692) ISN38_17680 PF01895 PhoU domain ISN38_17685 PF00005 ABC transporter ISN38_17690 PF00528 Binding-protein-dependent transport system inner membrane component ISN38_17695 PF00528 Binding-protein-dependent transport system inner membrane component ISN38_17700 PF12849 PBP superfamily domain ISN38_17705 PF12849 PBP superfamily domain ISN38_17710 PF07396 Phosphate-selective porin O and P ISN38_17720 PF00484 Carbonic anhydrase ISN38_17725 PF01740 STAS domain ISN38_17725 PF00916 Sulfate permease family ISN38_17730 PF10576 Iron-sulfur binding domain of endonuclease III ISN38_17730 PF00633 Helix-hairpin-helix motif ISN38_17730 PF00730 HhH-GPD superfamily base excision DNA repair protein ISN38_17740 PF00378 Enoyl-CoA hydratase/isomerase ISN38_17745 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISN38_17745 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISN38_17750 PF00293 NUDIX domain ISN38_17755 PF00581 Rhodanese-like domain ISN38_17790 PF02926 THUMP domain ISN38_17790 PF01170 Putative RNA methylase family UPF0020 ISN38_17790 PF10672 S-adenosylmethionine-dependent methyltransferase ISN38_17795 PF00072 Response regulator receiver domain ISN38_17800 PF01627 Hpt domain ISN38_17800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_17800 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISN38_17800 PF00072 Response regulator receiver domain ISN38_17800 PF00672 HAMP domain ISN38_17800 PF00512 His Kinase A (phospho-acceptor) domain ISN38_17805 PF04286 Protein of unknown function (DUF445) ISN38_17820 PF00171 Aldehyde dehydrogenase family ISN38_17825 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ISN38_17825 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ISN38_17830 PF00202 Aminotransferase class-III ISN38_17835 PF07883 Cupin domain ISN38_17835 PF01381 Helix-turn-helix ISN38_17840 PF00171 Aldehyde dehydrogenase family ISN38_17860 PF07690 Major Facilitator Superfamily ISN38_17865 PF02634 FdhD/NarQ family ISN38_17870 PF00384 Molybdopterin oxidoreductase ISN38_17880 PF00818 Ice nucleation protein repeat ISN38_17885 PF00083 Sugar (and other) transporter ISN38_17885 PF07690 Major Facilitator Superfamily ISN38_17890 PF00072 Response regulator receiver domain ISN38_17890 PF00990 Diguanylate cyclase, GGDEF domain ISN38_17895 PF01266 FAD dependent oxidoreductase ISN38_17900 PF00120 Glutamine synthetase, catalytic domain ISN38_17905 PF07722 Peptidase C26 ISN38_17910 PF00120 Glutamine synthetase, catalytic domain ISN38_17920 PF00202 Aminotransferase class-III ISN38_17925 PF13416 Bacterial extracellular solute-binding protein ISN38_17935 PF13533 Biotin-lipoyl like ISN38_17940 PF07690 Major Facilitator Superfamily ISN38_17945 PF02321 Outer membrane efflux protein ISN38_17950 PF00005 ABC transporter ISN38_17950 PF08402 TOBE domain ISN38_17955 PF00528 Binding-protein-dependent transport system inner membrane component ISN38_17960 PF00528 Binding-protein-dependent transport system inner membrane component ISN38_17965 PF00171 Aldehyde dehydrogenase family ISN38_17980 PF00571 CBS domain ISN38_17980 PF03471 Transporter associated domain ISN38_17990 PF02130 Uncharacterized protein family UPF0054 ISN38_17995 PF02562 PhoH-like protein ISN38_18000 PF01938 TRAM domain ISN38_18000 PF04055 Radical SAM superfamily ISN38_18000 PF00919 Uncharacterized protein family UPF0004 ISN38_18005 PF00043 Glutathione S-transferase, C-terminal domain ISN38_18005 PF02798 Glutathione S-transferase, N-terminal domain ISN38_18010 PF01464 Transglycosylase SLT domain ISN38_18015 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ISN38_18015 PF00355 Rieske [2Fe-2S] domain ISN38_18020 PF00032 Cytochrome b(C-terminal)/b6/petD ISN38_18020 PF00033 Cytochrome b/b6/petB ISN38_18030 PF02167 Cytochrome C1 family ISN38_18035 PF00043 Glutathione S-transferase, C-terminal domain ISN38_18035 PF02798 Glutathione S-transferase, N-terminal domain ISN38_18040 PF04386 Stringent starvation protein B ISN38_18055 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ISN38_18055 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ISN38_18065 PF00731 AIR carboxylase ISN38_18070 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ISN38_18070 PF02222 ATP-grasp domain ISN38_18075 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISN38_18075 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISN38_18080 PF00462 Glutaredoxin ISN38_18085 PF00106 short chain dehydrogenase ISN38_18090 PF01914 MarC family integral membrane protein ISN38_18095 PF00593 TonB dependent receptor ISN38_18100 PF11892 Domain of unknown function (DUF3412) ISN38_18100 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ISN38_18100 PF03641 Possible lysine decarboxylase ISN38_18105 PF06580 Histidine kinase ISN38_18105 PF07694 5TMR of 5TMR-LYT ISN38_18110 PF07963 Prokaryotic N-terminal methylation motif ISN38_18110 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor ISN38_18130 PF05567 Neisseria PilC beta-propeller domain ISN38_18135 PF07963 Prokaryotic N-terminal methylation motif ISN38_18135 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor ISN38_18160 PF01527 Transposase ISN38_18165 PF13333 Integrase core domain ISN38_18165 PF00665 Integrase core domain ISN38_18165 PF13276 HTH-like domain ISN38_18180 PF01513 ATP-NAD kinase ISN38_18205 PF08411 Exonuclease C-terminal ISN38_18205 PF00929 Exonuclease ISN38_18210 PF01494 FAD binding domain ISN38_18215 PF00266 Aminotransferase class-V ISN38_18225 PF06052 3-hydroxyanthranilic acid dioxygenase ISN38_18230 PF00484 Carbonic anhydrase ISN38_18275 PF00072 Response regulator receiver domain ISN38_18275 PF00196 Bacterial regulatory proteins, luxR family ISN38_18295 PF00152 tRNA synthetases class II (D, K and N) ISN38_18295 PF01336 OB-fold nucleic acid binding domain ISN38_18300 PF01521 Iron-sulphur cluster biosynthesis ISN38_18310 PF01250 Ribosomal protein S6 ISN38_18315 PF01084 Ribosomal protein S18 ISN38_18320 PF03948 Ribosomal protein L9, C-terminal domain ISN38_18320 PF01281 Ribosomal protein L9, N-terminal domain ISN38_18325 PF02463 RecF/RecN/SMC N terminal domain ISN38_18330 PF04354 ZipA, C-terminal FtsZ-binding domain ISN38_18335 PF00155 Aminotransferase class I and II ISN38_18340 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ISN38_18340 PF03120 NAD-dependent DNA ligase OB-fold domain ISN38_18340 PF00533 BRCA1 C Terminus (BRCT) domain ISN38_18340 PF01653 NAD-dependent DNA ligase adenylation domain ISN38_18340 PF12826 Helix-hairpin-helix motif ISN38_18345 PF00152 tRNA synthetases class II (D, K and N) ISN38_18355 PF01008 Initiation factor 2 subunit family ISN38_18360 PF03989 DNA gyrase C-terminal domain, beta-propeller ISN38_18360 PF00521 DNA gyrase/topoisomerase IV, subunit A ISN38_18380 PF00440 Bacterial regulatory proteins, tetR family ISN38_18395 PF17391 Urocanase N-terminal domain ISN38_18395 PF17392 Urocanase C-terminal domain ISN38_18395 PF01175 Urocanase Rossmann-like domain ISN38_18405 PF00221 Aromatic amino acid lyase ISN38_18410 PF07969 Amidohydrolase family ISN38_18425 PF00106 short chain dehydrogenase ISN38_18460 PF01794 Ferric reductase like transmembrane component ISN38_18465 PF00174 Oxidoreductase molybdopterin binding domain ISN38_18470 PF00266 Aminotransferase class-V ISN38_18475 PF01817 Chorismate mutase type II ISN38_18475 PF00800 Prephenate dehydratase ISN38_18475 PF01842 ACT domain ISN38_18480 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISN38_18490 PF03544 Gram-negative bacterial TonB protein C-terminal ISN38_18495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISN38_18495 PF02403 Seryl-tRNA synthetase N-terminal domain ISN38_18500 PF03466 LysR substrate binding domain ISN38_18500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN38_18535 PF13676 TIR domain ISN38_18545 PF01527 Transposase ISN38_18550 PF00665 Integrase core domain ISN38_18550 PF13333 Integrase core domain ISN38_18550 PF13276 HTH-like domain ISN38_18580 PF01527 Transposase ISN38_18635 PF12704 MacB-like periplasmic core domain ISN38_18635 PF00005 ABC transporter ISN38_18635 PF02687 FtsX-like permease family ISN38_18655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_18655 PF00512 His Kinase A (phospho-acceptor) domain ISN38_18660 PF00486 Transcriptional regulatory protein, C terminal ISN38_18660 PF00072 Response regulator receiver domain ISN38_18670 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISN38_18675 PF00294 pfkB family carbohydrate kinase ISN38_18680 PF05524 PEP-utilising enzyme, N-terminal ISN38_18680 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISN38_18680 PF02896 PEP-utilising enzyme, TIM barrel domain ISN38_18680 PF00381 PTS HPr component phosphorylation site ISN38_18680 PF00391 PEP-utilising enzyme, mobile domain ISN38_18685 PF00356 Bacterial regulatory proteins, lacI family ISN38_18695 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISN38_18695 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISN38_18695 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISN38_18700 PF01645 Conserved region in glutamate synthase ISN38_18705 PF03707 Bacterial signalling protein N terminal repeat ISN38_18705 PF00990 Diguanylate cyclase, GGDEF domain ISN38_18705 PF00563 EAL domain ISN38_18715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISN38_18725 PF17773 UPF0176 acylphosphatase like domain ISN38_18725 PF00581 Rhodanese-like domain ISN38_18735 PF00296 Luciferase-like monooxygenase ISN38_18750 PF01595 Cyclin M transmembrane N-terminal domain ISN38_18750 PF00571 CBS domain ISN38_18750 PF03471 Transporter associated domain ISN38_18760 PF01384 Phosphate transporter family ISN38_18770 PF01751 Toprim domain ISN38_18770 PF00204 DNA gyrase B ISN38_18770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_18770 PF00986 DNA gyrase B subunit, carboxyl terminus ISN38_18780 PF00117 Glutamine amidotransferase class-I ISN38_18780 PF06418 CTP synthase N-terminus ISN38_18785 PF00793 DAHP synthetase I family ISN38_18790 PF00113 Enolase, C-terminal TIM barrel domain ISN38_18790 PF03952 Enolase, N-terminal domain ISN38_18795 PF04977 Septum formation initiator ISN38_18800 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ISN38_18805 PF02542 YgbB family ISN38_18810 PF01142 tRNA pseudouridine synthase D (TruD) ISN38_18815 PF01713 Smr domain ISN38_18820 PF01975 Survival protein SurE ISN38_18830 PF09335 SNARE associated Golgi protein ISN38_18835 PF01551 Peptidase family M23 ISN38_18835 PF01476 LysM domain ISN38_18845 PF01985 CRS1 / YhbY (CRM) domain ISN38_18850 PF01728 FtsJ-like methyltransferase ISN38_18855 PF00004 ATPase family associated with various cellular activities (AAA) ISN38_18855 PF01434 Peptidase family M41 ISN38_18855 PF17862 AAA+ lid domain ISN38_18855 PF06480 FtsH Extracellular ISN38_18860 PF00809 Pterin binding enzyme ISN38_18870 PF17209 Hfq protein ISN38_18875 PF13167 GTP-binding GTPase N-terminal ISN38_18875 PF16360 GTP-binding GTPase Middle Region ISN38_18875 PF01926 50S ribosome-binding GTPase ISN38_18880 PF02464 Competence-damaged protein ISN38_18885 PF03109 ABC1 family ISN38_18890 PF00717 Peptidase S24-like ISN38_18890 PF01726 LexA DNA binding domain ISN38_18895 PF00154 recA bacterial DNA recombination protein ISN38_18900 PF02631 RecX family ISN38_18905 PF02272 DHHA1 domain ISN38_18905 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISN38_18905 PF01411 tRNA synthetases class II (A) ISN38_18910 PF02599 Global regulator protein family ISN38_18930 PF00128 Alpha amylase, catalytic domain ISN38_18930 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISN38_18935 PF02678 Pirin ISN38_18935 PF17954 Quercetinase C-terminal cupin domain ISN38_18940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN38_18940 PF03466 LysR substrate binding domain ISN38_18960 PF08543 Phosphomethylpyrimidine kinase ISN38_18960 PF02581 Thiamine monophosphate synthase ISN38_18965 PF14706 Transposase DNA-binding ISN38_18965 PF01609 Transposase DDE domain ISN38_18965 PF02281 Transposase Tn5 dimerisation domain ISN38_18985 PF03377 TAL effector repeat ISN38_19000 PF02562 PhoH-like protein ISN38_19000 PF13638 PIN domain ISN38_19005 PF00578 AhpC/TSA family ISN38_19015 PF00701 Dihydrodipicolinate synthetase family ISN38_19025 PF11953 Domain of unknown function (DUF3470) ISN38_19025 PF00037 4Fe-4S binding domain ISN38_19030 PF05035 2-keto-3-deoxy-galactonokinase ISN38_19035 PF08450 SMP-30/Gluconolactonase/LRE-like region ISN38_19040 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISN38_19040 PF13378 Enolase C-terminal domain-like ISN38_19045 PF01081 KDPG and KHG aldolase ISN38_19050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN38_19050 PF03466 LysR substrate binding domain ISN38_19070 PF00152 tRNA synthetases class II (D, K and N) ISN38_19070 PF01336 OB-fold nucleic acid binding domain ISN38_19075 PF00072 Response regulator receiver domain ISN38_19080 PF00512 His Kinase A (phospho-acceptor) domain ISN38_19080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_19080 PF00072 Response regulator receiver domain ISN38_19080 PF01627 Hpt domain ISN38_19085 PF00378 Enoyl-CoA hydratase/isomerase ISN38_19090 PF00501 AMP-binding enzyme ISN38_19090 PF13193 AMP-binding enzyme C-terminal domain ISN38_19100 PF00694 Aconitase C-terminal domain ISN38_19100 PF00330 Aconitase family (aconitate hydratase) ISN38_19115 PF00330 Aconitase family (aconitate hydratase) ISN38_19115 PF06434 Aconitate hydratase 2 N-terminus ISN38_19115 PF11791 Aconitate B N-terminal domain ISN38_19130 PF03707 Bacterial signalling protein N terminal repeat ISN38_19130 PF00990 Diguanylate cyclase, GGDEF domain ISN38_19130 PF00563 EAL domain ISN38_19135 PF00072 Response regulator receiver domain ISN38_19135 PF01339 CheB methylesterase ISN38_19140 PF03975 CheD chemotactic sensory transduction ISN38_19145 PF03705 CheR methyltransferase, all-alpha domain ISN38_19145 PF01739 CheR methyltransferase, SAM binding domain ISN38_19150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_19150 PF02203 Tar ligand binding domain homologue ISN38_19150 PF00672 HAMP domain ISN38_19160 PF00672 HAMP domain ISN38_19160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_19160 PF02203 Tar ligand binding domain homologue ISN38_19170 PF01584 CheW-like domain ISN38_19175 PF07238 PilZ domain ISN38_19175 PF07317 Flagellar regulator YcgR ISN38_19180 PF00672 HAMP domain ISN38_19180 PF02203 Tar ligand binding domain homologue ISN38_19180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_19190 PF00672 HAMP domain ISN38_19190 PF02203 Tar ligand binding domain homologue ISN38_19190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_19195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_19195 PF00672 HAMP domain ISN38_19195 PF02203 Tar ligand binding domain homologue ISN38_19200 PF00672 HAMP domain ISN38_19200 PF02203 Tar ligand binding domain homologue ISN38_19200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_19210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_19210 PF00672 HAMP domain ISN38_19210 PF02203 Tar ligand binding domain homologue ISN38_19220 PF00672 HAMP domain ISN38_19220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_19220 PF02203 Tar ligand binding domain homologue ISN38_19225 PF00672 HAMP domain ISN38_19225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_19225 PF02203 Tar ligand binding domain homologue ISN38_19230 PF02203 Tar ligand binding domain homologue ISN38_19230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_19230 PF00672 HAMP domain ISN38_19235 PF00672 HAMP domain ISN38_19235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN38_19235 PF02203 Tar ligand binding domain homologue ISN38_19240 PF01584 CheW-like domain ISN38_19240 PF09078 CheY binding ISN38_19240 PF02895 Signal transducing histidine kinase, homodimeric domain ISN38_19240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_19240 PF01627 Hpt domain ISN38_19245 PF00072 Response regulator receiver domain ISN38_19255 PF01584 CheW-like domain ISN38_19260 PF13614 AAA domain ISN38_19265 PF13677 Membrane MotB of proton-channel complex MotA/MotB ISN38_19265 PF00691 OmpA family ISN38_19270 PF01618 MotA/TolQ/ExbB proton channel family ISN38_19275 PF00072 Response regulator receiver domain ISN38_19275 PF01627 Hpt domain ISN38_19275 PF01584 CheW-like domain ISN38_19275 PF02895 Signal transducing histidine kinase, homodimeric domain ISN38_19275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN38_19280 PF04344 Chemotaxis phosphatase, CheZ ISN38_19285 PF00072 Response regulator receiver domain ISN38_19290 PF04545 Sigma-70, region 4 ISN38_19290 PF04539 Sigma-70 region 3 ISN38_19290 PF04542 Sigma-70 region 2 ISN38_19295 PF10609 NUBPL iron-transfer P-loop NTPase ISN38_19300 PF00448 SRP54-type protein, GTPase domain ISN38_19305 PF00771 FHIPEP family ISN38_19310 PF01312 FlhB HrpN YscU SpaS Family ISN38_19315 PF00990 Diguanylate cyclase, GGDEF domain ISN38_19320 PF00990 Diguanylate cyclase, GGDEF domain ISN38_19325 PF01311 Bacterial export proteins, family 1 ISN38_19330 PF01313 Bacterial export proteins, family 3 ISN38_19335 PF00813 FliP family ISN38_19340 PF04347 Flagellar biosynthesis protein, FliO ISN38_19345 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISN38_19350 PF02154 Flagellar motor switch protein FliM ISN38_19350 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISN38_19370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISN38_19370 PF18269 T3SS EscN ATPase C-terminal domain ISN38_19380 PF01706 FliG C-terminal domain ISN38_19380 PF14841 FliG middle domain ISN38_19380 PF14842 FliG N-terminal domain ISN38_19385 PF08345 Flagellar M-ring protein C-terminal ISN38_19385 PF01514 Secretory protein of YscJ/FliF family ISN38_19390 PF02049 Flagellar hook-basal body complex protein FliE ISN38_19395 PF00535 Glycosyl transferase family 2 ISN38_19395 PF00534 Glycosyl transferases group 1 ISN38_19435 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISN38_19435 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISN38_19445 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISN38_19450 PF00158 Sigma-54 interaction domain ISN38_19450 PF06490 Flagellar regulatory protein FleQ ISN38_19450 PF02954 Bacterial regulatory protein, Fis family ISN38_19455 PF00072 Response regulator receiver domain ISN38_19455 PF01339 CheB methylesterase ISN38_19460 PF00309 Sigma-54 factor, Activator interacting domain (AID) ISN38_19460 PF04963 Sigma-54 factor, core binding domain ISN38_19460 PF04552 Sigma-54, DNA binding domain ISN38_19465 PF00072 Response regulator receiver domain ISN38_19465 PF00196 Bacterial regulatory proteins, luxR family ISN38_19480 PF02561 Flagellar protein FliS ISN38_19485 PF07195 Flagellar hook-associated protein 2 C-terminus ISN38_19485 PF07196 Flagellin hook IN motif ISN38_19485 PF02465 Flagellar hook-associated protein 2 N-terminus ISN38_19490 PF00669 Bacterial flagellin N-terminal helical region ISN38_19490 PF00700 Bacterial flagellin C-terminal helical region ISN38_19495 PF00669 Bacterial flagellin N-terminal helical region ISN38_19500 PF00460 Flagella basal body rod protein ISN38_19500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISN38_19500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISN38_19500 PF00460 Flagella basal body rod protein ISN38_19505 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ISN38_19505 PF10135 Rod binding protein ISN38_19510 PF02119 Flagellar P-ring protein ISN38_19515 PF02107 Flagellar L-ring protein ISN38_19520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISN38_19520 PF00460 Flagella basal body rod protein ISN38_19530 PF03432 Relaxase/Mobilisation nuclease domain ISN38_19530 PF18821 Large polyvalent protein-associated domain 7 ISN38_19545 PF17273 Family of unknown function (DUF5338) ISN38_19550 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ISN38_19555 PF11657 Transcriptional activator TraM ISN38_19580 PF02195 ParB-like nuclease domain ISN38_19580 PF06613 KorB C-terminal beta-barrel domain ISN38_19580 PF08535 KorB domain ISN38_19585 PF13614 AAA domain ISN38_19590 PF16509 TrfB plasmid transcriptional repressor ISN38_19600 PF17394 Uncharacterized KleE stable inheritance protein ISN38_19620 PF03230 Antirestriction protein ISN38_19630 PF07042 TrfA protein ISN38_19635 PF00436 Single-strand binding protein family ISN38_19640 PF16509 TrfB plasmid transcriptional repressor ISN38_19645 PF00437 Type II/IV secretion system protein ISN38_19650 PF04956 TrbC/VIRB2 family ISN38_19655 PF05101 Type IV secretory pathway, VirB3-like protein ISN38_19660 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ISN38_19670 PF03524 Conjugal transfer protein ISN38_19680 PF03743 Bacterial conjugation TrbI-like protein ISN38_19775 PF01751 Toprim domain ISN38_19775 PF01131 DNA topoisomerase ISN38_19780 PF10502 Signal peptidase, peptidase S26 ISN38_19805 PF03743 Bacterial conjugation TrbI-like protein ISN38_19815 PF13091 PLD-like domain ISN38_19820 PF01936 NYN domain ISN38_19820 PF09722 Protein of unknown function (DUF2384) ISN38_19830 PF18340 DNA relaxase TraI 2B/2B-like domain ISN38_19830 PF18272 single-stranded DNA binding TraI N-terminal subdomain ISN38_19830 PF07057 DNA helicase TraI ISN38_19830 PF08751 TrwC relaxase ISN38_19875 PF02661 Fic/DOC family ISN38_19875 PF17841 BID domain of Bartonella effector protein (Bep) ISN38_19880 PF18495 Antitoxin VbhA ISN38_19890 PF00436 Single-strand binding protein family ISN38_19895 PF10892 Protein of unknown function (DUF2688) ISN38_19900 PF06067 Domain of unknown function (DUF932) ISN38_19935 PF11740 Plasmid replication region DNA-binding N-term ISN38_19980 PF00239 Resolvase, N terminal domain ISN38_19980 PF02796 Helix-turn-helix domain of resolvase