locus-tag class description FD63_00005 PF11638 DnaA N-terminal domain FD63_00005 PF08299 Bacterial dnaA protein helix-turn-helix FD63_00005 PF00308 Bacterial dnaA protein FD63_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain FD63_00010 PF02767 DNA polymerase III beta subunit, central domain FD63_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain FD63_00015 PF02463 RecF/RecN/SMC N terminal domain FD63_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_00020 PF18053 DNA gyrase B subunit insert domain FD63_00020 PF00986 DNA gyrase B subunit, carboxyl terminus FD63_00020 PF00204 DNA gyrase B FD63_00020 PF01751 Toprim domain FD63_00025 PF02517 CPBP intramembrane metalloprotease FD63_00030 PF01435 Peptidase family M48 FD63_00040 PF03544 Gram-negative bacterial TonB protein C-terminal FD63_00045 PF01618 MotA/TolQ/ExbB proton channel family FD63_00050 PF02472 Biopolymer transport protein ExbD/TolR FD63_00055 PF02472 Biopolymer transport protein ExbD/TolR FD63_00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FD63_00075 PF13091 PLD-like domain FD63_00075 PF13396 Phospholipase_D-nuclease N-terminal FD63_00080 PF04055 Radical SAM superfamily FD63_00095 PF01810 LysE type translocator FD63_00100 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FD63_00105 PF00155 Aminotransferase class I and II FD63_00110 PF00593 TonB dependent receptor FD63_00110 PF07715 TonB-dependent Receptor Plug Domain FD63_00120 PF00158 Sigma-54 interaction domain FD63_00120 PF02954 Bacterial regulatory protein, Fis family FD63_00120 PF01590 GAF domain FD63_00125 PF00171 Aldehyde dehydrogenase family FD63_00130 PF00107 Zinc-binding dehydrogenase FD63_00130 PF08240 Alcohol dehydrogenase GroES-like domain FD63_00150 PF02735 Ku70/Ku80 beta-barrel domain FD63_00155 PF13298 DNA polymerase Ligase (LigD) FD63_00155 PF01068 ATP dependent DNA ligase domain FD63_00155 PF04679 ATP dependent DNA ligase C terminal region FD63_00160 PF01070 FMN-dependent dehydrogenase FD63_00180 PF12241 Trans-2-enoyl-CoA reductase catalytic region FD63_00180 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FD63_00180 PF07055 Enoyl reductase FAD binding domain FD63_00190 PF00294 pfkB family carbohydrate kinase FD63_00225 PF01804 Penicillin amidase FD63_00240 PF02677 Epoxyqueuosine reductase QueH FD63_00270 PF07715 TonB-dependent Receptor Plug Domain FD63_00270 PF00593 TonB dependent receptor FD63_00300 PF00135 Carboxylesterase family FD63_00315 PF03480 Bacterial extracellular solute-binding protein, family 7 FD63_00325 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FD63_00330 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain FD63_00330 PF04616 Glycosyl hydrolases family 43 FD63_00335 PF00356 Bacterial regulatory proteins, lacI family FD63_00340 PF04962 KduI/IolB family FD63_00365 PF00351 Biopterin-dependent aromatic amino acid hydroxylase FD63_00370 PF01037 Lrp/AsnC ligand binding domain FD63_00395 PF01734 Patatin-like phospholipase FD63_00410 PF01569 PAP2 superfamily FD63_00415 PF01569 PAP2 superfamily FD63_00425 PF03741 Integral membrane protein TerC family FD63_00430 PF17785 PUA-like domain FD63_00430 PF10672 S-adenosylmethionine-dependent methyltransferase FD63_00470 PF02595 Glycerate kinase family FD63_00475 PF10947 Protein of unknown function (DUF2628) FD63_00480 PF13520 Amino acid permease FD63_00485 PF00072 Response regulator receiver domain FD63_00485 PF00196 Bacterial regulatory proteins, luxR family FD63_00490 PF00512 His Kinase A (phospho-acceptor) domain FD63_00490 PF00989 PAS fold FD63_00490 PF08447 PAS fold FD63_00490 PF13426 PAS domain FD63_00490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_00490 PF13493 Domain of unknown function (DUF4118) FD63_00495 PF02308 MgtC family FD63_00510 PF02646 RmuC family FD63_00515 PF00255 Glutathione peroxidase FD63_00520 PF04333 MlaA lipoprotein FD63_00535 PF02470 MlaD protein FD63_00540 PF02405 Permease MlaE FD63_00545 PF00005 ABC transporter FD63_00550 PF17946 RecC C-terminal domain FD63_00555 PF13361 UvrD-like helicase C-terminal domain FD63_00555 PF00580 UvrD/REP helicase N-terminal domain FD63_00555 PF12705 PD-(D/E)XK nuclease superfamily FD63_00560 PF13538 UvrD-like helicase C-terminal domain FD63_00580 PF01230 HIT domain FD63_00585 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FD63_00590 PF09386 Antitoxin ParD FD63_00625 PF08845 Toxin SymE, type I toxin-antitoxin system FD63_00655 PF00083 Sugar (and other) transporter FD63_00660 PF01227 GTP cyclohydrolase I FD63_00685 PF01925 Sulfite exporter TauE/SafE FD63_00690 PF02810 SEC-C motif FD63_00700 PF01263 Aldose 1-epimerase FD63_00705 PF07690 Major Facilitator Superfamily FD63_00710 PF01126 Heme oxygenase FD63_00715 PF08446 PAS fold FD63_00715 PF00360 Phytochrome region FD63_00715 PF13426 PAS domain FD63_00715 PF01590 GAF domain FD63_00755 PF02142 MGS-like domain FD63_00760 PF00150 Cellulase (glycosyl hydrolase family 5) FD63_00765 PF00150 Cellulase (glycosyl hydrolase family 5) FD63_00770 PF00150 Cellulase (glycosyl hydrolase family 5) FD63_00775 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD63_00775 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FD63_00780 PF04898 Glutamate synthase central domain FD63_00780 PF01645 Conserved region in glutamate synthase FD63_00780 PF00310 Glutamine amidotransferases class-II FD63_00780 PF01493 GXGXG motif FD63_00830 PF09369 Domain of unknown function (DUF1998) FD63_00830 PF00271 Helicase conserved C-terminal domain FD63_00830 PF00270 DEAD/DEAH box helicase FD63_00835 PF01527 Transposase FD63_00840 PF13333 Integrase core domain FD63_00840 PF00665 Integrase core domain FD63_00840 PF13276 HTH-like domain FD63_00880 PF00083 Sugar (and other) transporter FD63_00925 PF13614 AAA domain FD63_00940 PF13091 PLD-like domain FD63_00945 PF03061 Thioesterase superfamily FD63_00955 PF12146 Serine aminopeptidase, S33 FD63_00965 PF01161 Phosphatidylethanolamine-binding protein FD63_00970 PF02673 Bacitracin resistance protein BacA FD63_00975 PF00120 Glutamine synthetase, catalytic domain FD63_00975 PF03951 Glutamine synthetase, beta-Grasp domain FD63_00980 PF00543 Nitrogen regulatory protein P-II FD63_00985 PF00909 Ammonium Transporter Family FD63_00995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_00995 PF00989 PAS fold FD63_00995 PF00512 His Kinase A (phospho-acceptor) domain FD63_01000 PF00158 Sigma-54 interaction domain FD63_01000 PF00072 Response regulator receiver domain FD63_01000 PF02954 Bacterial regulatory protein, Fis family FD63_01005 PF00080 Copper/zinc superoxide dismutase (SODC) FD63_01010 PF00080 Copper/zinc superoxide dismutase (SODC) FD63_01020 PF00108 Thiolase, N-terminal domain FD63_01020 PF02803 Thiolase, C-terminal domain FD63_01060 PF02556 Preprotein translocase subunit SecB FD63_01065 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FD63_01065 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FD63_01075 PF00588 SpoU rRNA Methylase family FD63_01085 PF00675 Insulinase (Peptidase family M16) FD63_01085 PF05193 Peptidase M16 inactive domain FD63_01095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FD63_01095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FD63_01100 PF13784 Fic/DOC family N-terminal FD63_01100 PF02661 Fic/DOC family FD63_01105 PF00561 alpha/beta hydrolase fold FD63_01115 PF03692 Putative zinc- or iron-chelating domain FD63_01120 PF00501 AMP-binding enzyme FD63_01130 PF00144 Beta-lactamase FD63_01135 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family FD63_01145 PF01820 D-ala D-ala ligase N-terminus FD63_01145 PF07478 D-ala D-ala ligase C-terminus FD63_01155 PF03109 ABC1 family FD63_01160 PF02683 Cytochrome C biogenesis protein transmembrane region FD63_01160 PF11412 Disulphide bond corrector protein DsbC FD63_01165 PF00849 RNA pseudouridylate synthase FD63_01175 PF00472 RF-1 domain FD63_01185 PF01432 Peptidase family M3 FD63_01210 PF01274 Malate synthase FD63_01215 PF00463 Isocitrate lyase family FD63_01220 PF00990 Diguanylate cyclase, GGDEF domain FD63_01220 PF17151 Periplasmic sensor domain FD63_01250 PF00916 Sulfate permease family FD63_01250 PF01740 STAS domain FD63_01285 PF12146 Serine aminopeptidase, S33 FD63_01290 PF16884 N-terminal domain of oxidoreductase FD63_01290 PF00107 Zinc-binding dehydrogenase FD63_01305 PF00849 RNA pseudouridylate synthase FD63_01315 PF00270 DEAD/DEAH box helicase FD63_01315 PF08482 ATP-dependent helicase C-terminal FD63_01315 PF00271 Helicase conserved C-terminal domain FD63_01315 PF04408 Helicase associated domain (HA2) FD63_01320 PF01026 TatD related DNase FD63_01335 PF01061 ABC-2 type transporter FD63_01340 PF00005 ABC transporter FD63_01345 PF00970 Oxidoreductase FAD-binding domain FD63_01345 PF00111 2Fe-2S iron-sulfur cluster binding domain FD63_01345 PF00175 Oxidoreductase NAD-binding domain FD63_01355 PF01381 Helix-turn-helix FD63_01360 PF00561 alpha/beta hydrolase fold FD63_01365 PF00005 ABC transporter FD63_01380 PF03350 Uncharacterized protein family, UPF0114 FD63_01385 PF00043 Glutathione S-transferase, C-terminal domain FD63_01385 PF02798 Glutathione S-transferase, N-terminal domain FD63_01390 PF00326 Prolyl oligopeptidase family FD63_01390 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region FD63_01405 PF13340 Putative transposase of IS4/5 family (DUF4096) FD63_01420 PF00490 Delta-aminolevulinic acid dehydratase FD63_01440 PF00175 Oxidoreductase NAD-binding domain FD63_01440 PF00258 Flavodoxin FD63_01440 PF00667 FAD binding domain FD63_01445 PF04052 TolB amino-terminal domain FD63_01445 PF07676 WD40-like Beta Propeller Repeat FD63_01450 PF01488 Shikimate / quinate 5-dehydrogenase FD63_01450 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FD63_01450 PF08501 Shikimate dehydrogenase substrate binding domain FD63_01460 PF13307 Helicase C-terminal domain FD63_01460 PF06733 DEAD_2 FD63_01475 PF00199 Catalase FD63_01475 PF06628 Catalase-related immune-responsive FD63_01490 PF00326 Prolyl oligopeptidase family FD63_01495 PF04993 TfoX N-terminal domain FD63_01520 PF00202 Aminotransferase class-III FD63_01545 PF01594 AI-2E family transporter FD63_01560 PF07995 Glucose / Sorbosone dehydrogenase FD63_01580 PF00589 Phage integrase family FD63_01580 PF13495 Phage integrase, N-terminal SAM-like domain FD63_01585 PF00920 Dehydratase family FD63_01595 PF03738 Glutathionylspermidine synthase preATP-grasp FD63_01605 PF07726 ATPase family associated with various cellular activities (AAA) FD63_01605 PF17863 AAA lid domain FD63_01640 PF07690 Major Facilitator Superfamily FD63_01650 PF00132 Bacterial transferase hexapeptide (six repeats) FD63_01665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FD63_01665 PF00529 HlyD membrane-fusion protein of T1SS FD63_01670 PF00873 AcrB/AcrD/AcrF family FD63_01675 PF02321 Outer membrane efflux protein FD63_01680 PF00563 EAL domain FD63_01680 PF00990 Diguanylate cyclase, GGDEF domain FD63_01680 PF03707 Bacterial signalling protein N terminal repeat FD63_01685 PF01134 Glucose inhibited division protein A FD63_01685 PF13932 GidA associated domain FD63_01695 PF00291 Pyridoxal-phosphate dependent enzyme FD63_01710 PF13649 Methyltransferase domain FD63_01720 PF12697 Alpha/beta hydrolase family FD63_01725 PF00155 Aminotransferase class I and II FD63_01730 PF06968 Biotin and Thiamin Synthesis associated domain FD63_01730 PF04055 Radical SAM superfamily FD63_01740 PF07549 SecD/SecF GG Motif FD63_01740 PF02355 Protein export membrane protein FD63_01745 PF01040 UbiA prenyltransferase family FD63_01775 PF01078 Magnesium chelatase, subunit ChlI FD63_01775 PF13335 Magnesium chelatase, subunit ChlI C-terminal FD63_01780 PF04380 Membrane fusogenic activity FD63_01785 PF00543 Nitrogen regulatory protein P-II FD63_01795 PF17284 Spermidine synthase tetramerisation domain FD63_01800 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FD63_01800 PF17944 Arginine decarboxylase C-terminal helical extension FD63_01800 PF17810 Arginine decarboxylase helical bundle domain FD63_01805 PF00501 AMP-binding enzyme FD63_01805 PF13193 AMP-binding enzyme C-terminal domain FD63_01805 PF00975 Thioesterase domain FD63_01805 PF00550 Phosphopantetheine attachment site FD63_01805 PF00668 Condensation domain FD63_01815 PF01757 Acyltransferase family FD63_01820 PF03466 LysR substrate binding domain FD63_01820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD63_01840 PF00106 short chain dehydrogenase FD63_01850 PF00750 tRNA synthetases class I (R) FD63_01850 PF05746 DALR anticodon binding domain FD63_01850 PF03485 Arginyl tRNA synthetase N terminal domain FD63_01855 PF04002 RadC-like JAB domain FD63_01860 PF04127 DNA / pantothenate metabolism flavoprotein FD63_01860 PF02441 Flavoprotein FD63_01865 PF00692 dUTPase FD63_01870 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FD63_01870 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FD63_01870 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FD63_01870 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FD63_01880 PF00156 Phosphoribosyl transferase domain FD63_01890 PF07690 Major Facilitator Superfamily FD63_01900 PF03702 Anhydro-N-acetylmuramic acid kinase FD63_01905 PF04225 Opacity-associated protein A LysM-like domain FD63_01905 PF01551 Peptidase family M23 FD63_01910 PF00579 tRNA synthetases class I (W and Y) FD63_01940 PF00107 Zinc-binding dehydrogenase FD63_01940 PF08240 Alcohol dehydrogenase GroES-like domain FD63_01945 PF04389 Peptidase family M28 FD63_01955 PF01551 Peptidase family M23 FD63_01960 PF13180 PDZ domain FD63_01960 PF03572 Peptidase family S41 FD63_01975 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FD63_02005 PF14850 DNA-binding domain of Proline dehydrogenase FD63_02005 PF01619 Proline dehydrogenase FD63_02005 PF00171 Aldehyde dehydrogenase family FD63_02005 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FD63_02020 PF00115 Cytochrome C and Quinol oxidase polypeptide I FD63_02030 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FD63_02035 PF00510 Cytochrome c oxidase subunit III FD63_02060 PF01040 UbiA prenyltransferase family FD63_02070 PF13593 SBF-like CPA transporter family (DUF4137) FD63_02075 PF10410 DnaB-helicase binding domain of primase FD63_02075 PF01807 CHC2 zinc finger FD63_02075 PF08278 DNA primase DnaG DnaB-binding FD63_02075 PF08275 DNA primase catalytic core, N-terminal domain FD63_02080 PF03631 Virulence factor BrkB FD63_02090 PF01165 Ribosomal protein S21 FD63_02095 PF00814 Glycoprotease family FD63_02100 PF02152 Dihydroneopterin aldolase FD63_02105 PF14403 Circularly permuted ATP-grasp type 2 FD63_02115 PF01915 Glycosyl hydrolase family 3 C-terminal domain FD63_02115 PF00933 Glycosyl hydrolase family 3 N terminal domain FD63_02115 PF14310 Fibronectin type III-like domain FD63_02125 PF07995 Glucose / Sorbosone dehydrogenase FD63_02145 PF13520 Amino acid permease FD63_02160 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FD63_02160 PF13378 Enolase C-terminal domain-like FD63_02170 PF00593 TonB dependent receptor FD63_02170 PF07715 TonB-dependent Receptor Plug Domain FD63_02175 PF01510 N-acetylmuramoyl-L-alanine amidase FD63_02225 PF07063 Domain of unknown function (DUF1338) FD63_02240 PF00873 AcrB/AcrD/AcrF family FD63_02245 PF00873 AcrB/AcrD/AcrF family FD63_02250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FD63_02260 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FD63_02260 PF14489 QueF-like protein FD63_02265 PF04972 BON domain FD63_02265 PF01476 LysM domain FD63_02280 PF01555 DNA methylase FD63_02305 PF03971 Monomeric isocitrate dehydrogenase FD63_02315 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) FD63_02325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FD63_02325 PF07498 Rho termination factor, N-terminal domain FD63_02325 PF07497 Rho termination factor, RNA-binding domain FD63_02330 PF00085 Thioredoxin FD63_02335 PF00270 DEAD/DEAH box helicase FD63_02335 PF12300 ATP-dependent RNA helicase RhlB FD63_02335 PF00271 Helicase conserved C-terminal domain FD63_02340 PF00005 ABC transporter FD63_02345 PF18075 FtsX extracellular domain FD63_02350 PF01339 CheB methylesterase FD63_02350 PF00072 Response regulator receiver domain FD63_02355 PF03167 Uracil DNA glycosylase superfamily FD63_02360 PF00140 Sigma-70 factor, region 1.2 FD63_02360 PF04542 Sigma-70 region 2 FD63_02360 PF04545 Sigma-70, region 4 FD63_02365 PF03458 UPF0126 domain FD63_02370 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD63_02380 PF00270 DEAD/DEAH box helicase FD63_02380 PF18074 Primosomal protein N C-terminal domain FD63_02380 PF00271 Helicase conserved C-terminal domain FD63_02380 PF17764 3′ DNA-binding domain (3′BD) FD63_02380 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FD63_02395 PF01554 MatE FD63_02400 PF01343 Peptidase family S49 FD63_02425 PF01300 Telomere recombination FD63_02430 PF13368 Topoisomerase C-terminal repeat FD63_02430 PF01751 Toprim domain FD63_02430 PF01131 DNA topoisomerase FD63_02435 PF06271 RDD family FD63_02445 PF04361 Protein of unknown function (DUF494) FD63_02450 PF02481 DNA recombination-mediator protein A FD63_02450 PF17782 DprA winged helix domain FD63_02455 PF01476 LysM domain FD63_02460 PF01327 Polypeptide deformylase FD63_02465 PF00551 Formyl transferase FD63_02465 PF02911 Formyl transferase, C-terminal domain FD63_02470 PF01189 16S rRNA methyltransferase RsmB/F FD63_02470 PF01029 NusB family FD63_02475 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FD63_02490 PF00535 Glycosyl transferase family 2 FD63_02510 PF00925 GTP cyclohydrolase II FD63_02515 PF00583 Acetyltransferase (GNAT) family FD63_02525 PF02580 D-Tyr-tRNA(Tyr) deacylase FD63_02530 PF04542 Sigma-70 region 2 FD63_02530 PF04545 Sigma-70, region 4 FD63_02530 PF00140 Sigma-70 factor, region 1.2 FD63_02530 PF03979 Sigma-70 factor, region 1.1 FD63_02530 PF04539 Sigma-70 region 3 FD63_02530 PF04546 Sigma-70, non-essential region FD63_02535 PF03377 TAL effector repeat FD63_02550 PF01527 Transposase FD63_02560 PF07690 Major Facilitator Superfamily FD63_02565 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FD63_02565 PF00356 Bacterial regulatory proteins, lacI family FD63_02575 PF00128 Alpha amylase, catalytic domain FD63_02575 PF11896 Domain of unknown function (DUF3416) FD63_02580 PF00128 Alpha amylase, catalytic domain FD63_02580 PF16657 Maltogenic Amylase, C-terminal domain FD63_02585 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FD63_02585 PF00128 Alpha amylase, catalytic domain FD63_02585 PF02806 Alpha amylase, C-terminal all-beta domain FD63_02595 PF01527 Transposase FD63_02605 PF13683 Integrase core domain FD63_02605 PF13276 HTH-like domain FD63_02610 PF01527 Transposase FD63_02620 PF03377 TAL effector repeat FD63_02640 PF12706 Beta-lactamase superfamily domain FD63_02645 PF00440 Bacterial regulatory proteins, tetR family FD63_02645 PF08359 YsiA-like protein, C-terminal region FD63_02650 PF01494 FAD binding domain FD63_02685 PF02203 Tar ligand binding domain homologue FD63_02685 PF00672 HAMP domain FD63_02685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_02700 PF05067 Manganese containing catalase FD63_02705 PF05974 Domain of unknown function (DUF892) FD63_02710 PF05974 Domain of unknown function (DUF892) FD63_02720 PF00990 Diguanylate cyclase, GGDEF domain FD63_02720 PF00563 EAL domain FD63_02720 PF03707 Bacterial signalling protein N terminal repeat FD63_02725 PF06745 KaiC FD63_02735 PF00440 Bacterial regulatory proteins, tetR family FD63_02740 PF00175 Oxidoreductase NAD-binding domain FD63_02740 PF00111 2Fe-2S iron-sulfur cluster binding domain FD63_02740 PF00970 Oxidoreductase FAD-binding domain FD63_02745 PF00487 Fatty acid desaturase FD63_02755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FD63_02755 PF00205 Thiamine pyrophosphate enzyme, central domain FD63_02755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FD63_02760 PF00512 His Kinase A (phospho-acceptor) domain FD63_02760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_02765 PF00158 Sigma-54 interaction domain FD63_02765 PF02954 Bacterial regulatory protein, Fis family FD63_02765 PF00072 Response regulator receiver domain FD63_02780 PF07690 Major Facilitator Superfamily FD63_02790 PF18766 SWI2/SNF2 ATPase FD63_02790 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FD63_02790 PF11867 Domain of unknown function (DUF3387) FD63_02810 PF12161 HsdM N-terminal domain FD63_02810 PF02384 N-6 DNA Methylase FD63_02825 PF14824 Sirohaem biosynthesis protein central FD63_02825 PF10414 Sirohaem synthase dimerisation region FD63_02825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FD63_02830 PF01339 CheB methylesterase FD63_02830 PF00072 Response regulator receiver domain FD63_02835 PF00005 ABC transporter FD63_02840 PF07690 Major Facilitator Superfamily FD63_02845 PF04324 BFD-like [2Fe-2S] binding domain FD63_02845 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FD63_02845 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FD63_02845 PF18267 Rubredoxin NAD+ reductase C-terminal domain FD63_02845 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD63_02850 PF00355 Rieske [2Fe-2S] domain FD63_02855 PF01568 Molydopterin dinucleotide binding domain FD63_02855 PF00384 Molybdopterin oxidoreductase FD63_02855 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FD63_02855 PF04324 BFD-like [2Fe-2S] binding domain FD63_02860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FD63_02870 PF00128 Alpha amylase, catalytic domain FD63_02870 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FD63_02880 PF00128 Alpha amylase, catalytic domain FD63_02885 PF02446 4-alpha-glucanotransferase FD63_02890 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FD63_02890 PF11941 Domain of unknown function (DUF3459) FD63_02890 PF00128 Alpha amylase, catalytic domain FD63_02895 PF00128 Alpha amylase, catalytic domain FD63_02895 PF02806 Alpha amylase, C-terminal all-beta domain FD63_02895 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FD63_02900 PF08323 Starch synthase catalytic domain FD63_02900 PF00534 Glycosyl transferases group 1 FD63_02910 PF00072 Response regulator receiver domain FD63_02910 PF00486 Transcriptional regulatory protein, C terminal FD63_02915 PF00072 Response regulator receiver domain FD63_02915 PF13188 PAS domain FD63_02915 PF08448 PAS fold FD63_02915 PF00512 His Kinase A (phospho-acceptor) domain FD63_02915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_02925 PF13632 Glycosyl transferase family group 2 FD63_02935 PF04397 LytTr DNA-binding domain FD63_02935 PF00072 Response regulator receiver domain FD63_02940 PF03900 Porphobilinogen deaminase, C-terminal domain FD63_02940 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FD63_02955 PF01638 HxlR-like helix-turn-helix FD63_02970 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FD63_02970 PF00326 Prolyl oligopeptidase family FD63_02980 PF00155 Aminotransferase class I and II FD63_02985 PF00326 Prolyl oligopeptidase family FD63_02985 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FD63_02995 PF04304 Protein of unknown function (DUF454) FD63_03005 PF01678 Diaminopimelate epimerase FD63_03015 PF02899 Phage integrase, N-terminal SAM-like domain FD63_03015 PF00589 Phage integrase family FD63_03020 PF00227 Proteasome subunit FD63_03025 PF10431 C-terminal, D2-small domain, of ClpB protein FD63_03025 PF07724 AAA domain (Cdc48 subfamily) FD63_03025 PF00004 ATPase family associated with various cellular activities (AAA) FD63_03040 PF07715 TonB-dependent Receptor Plug Domain FD63_03040 PF00593 TonB dependent receptor FD63_03050 PF01209 ubiE/COQ5 methyltransferase family FD63_03055 PF11838 ERAP1-like C-terminal domain FD63_03055 PF01433 Peptidase family M1 domain FD63_03060 PF00364 Biotin-requiring enzyme FD63_03060 PF00561 alpha/beta hydrolase fold FD63_03080 PF00294 pfkB family carbohydrate kinase FD63_03090 PF04085 rod shape-determining protein MreC FD63_03100 PF03717 Penicillin-binding Protein dimerisation domain FD63_03100 PF00905 Penicillin binding protein transpeptidase domain FD63_03105 PF01098 Cell cycle protein FD63_03115 PF00295 Glycosyl hydrolases family 28 FD63_03125 PF13406 Transglycosylase SLT domain FD63_03130 PF03330 Lytic transglycolase FD63_03130 PF05036 Sporulation related domain FD63_03135 PF00768 D-alanyl-D-alanine carboxypeptidase FD63_03135 PF07943 Penicillin-binding protein 5, C-terminal domain FD63_03165 PF04359 Protein of unknown function (DUF493) FD63_03170 PF03099 Biotin/lipoate A/B protein ligase family FD63_03175 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FD63_03175 PF04055 Radical SAM superfamily FD63_03180 PF00595 PDZ domain FD63_03180 PF11818 C-terminal domain of tail specific protease (DUF3340) FD63_03180 PF03572 Peptidase family S41 FD63_03180 PF17804 Tail specific protease N-terminal domain FD63_03200 PF01467 Cytidylyltransferase-like FD63_03200 PF00293 NUDIX domain FD63_03235 PF06969 HemN C-terminal domain FD63_03235 PF04055 Radical SAM superfamily FD63_03240 PF01725 Ham1 family FD63_03245 PF01138 3' exoribonuclease family, domain 1 FD63_03245 PF03725 3' exoribonuclease family, domain 2 FD63_03250 PF08340 Domain of unknown function (DUF1732) FD63_03250 PF03755 YicC-like family, N-terminal region FD63_03255 PF00625 Guanylate kinase FD63_03260 PF01192 RNA polymerase Rpb6 FD63_03265 PF02824 TGS domain FD63_03265 PF04607 Region found in RelA / SpoT proteins FD63_03265 PF13291 ACT domain FD63_03275 PF01042 Endoribonuclease L-PSP FD63_03280 PF00270 DEAD/DEAH box helicase FD63_03280 PF00271 Helicase conserved C-terminal domain FD63_03280 PF17191 RecG wedge domain FD63_03285 PF01156 Inosine-uridine preferring nucleoside hydrolase FD63_03290 PF01197 Ribosomal protein L31 FD63_03295 PF00285 Citrate synthase, C-terminal domain FD63_03300 PF01527 Transposase FD63_03310 PF01207 Dihydrouridine synthase (Dus) FD63_03325 PF00294 pfkB family carbohydrate kinase FD63_03325 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FD63_03330 PF01773 Na+ dependent nucleoside transporter N-terminus FD63_03330 PF07662 Na+ dependent nucleoside transporter C-terminus FD63_03330 PF07670 Nucleoside recognition FD63_03335 PF00248 Aldo/keto reductase family FD63_03345 PF07715 TonB-dependent Receptor Plug Domain FD63_03345 PF00593 TonB dependent receptor FD63_03370 PF00005 ABC transporter FD63_03375 PF13472 GDSL-like Lipase/Acylhydrolase family FD63_03380 PF00486 Transcriptional regulatory protein, C terminal FD63_03380 PF00072 Response regulator receiver domain FD63_03385 PF00512 His Kinase A (phospho-acceptor) domain FD63_03385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_03385 PF08521 Two-component sensor kinase N-terminal FD63_03395 PF01219 Prokaryotic diacylglycerol kinase FD63_03400 PF03741 Integral membrane protein TerC family FD63_03405 PF04011 LemA family FD63_03420 PF01790 Prolipoprotein diacylglyceryl transferase FD63_03425 PF00303 Thymidylate synthase FD63_03430 PF00186 Dihydrofolate reductase FD63_03435 PF00149 Calcineurin-like phosphoesterase FD63_03440 PF04379 ApaG domain FD63_03445 PF00398 Ribosomal RNA adenine dimethylase FD63_03455 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FD63_03460 PF00639 PPIC-type PPIASE domain FD63_03460 PF09312 SurA N-terminal domain FD63_03465 PF04453 LPS transport system D FD63_03465 PF03968 OstA-like protein FD63_03470 PF00850 Histone deacetylase domain FD63_03475 PF01923 Cobalamin adenosyltransferase FD63_03485 PF01494 FAD binding domain FD63_03490 PF01494 FAD binding domain FD63_03505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FD63_03505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FD63_03510 PF01728 FtsJ-like methyltransferase FD63_03510 PF18125 RlmM ferredoxin-like domain FD63_03530 PF00892 EamA-like transporter family FD63_03535 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FD63_03535 PF00749 tRNA synthetases class I (E and Q), catalytic domain FD63_03555 PF01625 Peptide methionine sulfoxide reductase FD63_03560 PF00923 Transaldolase/Fructose-6-phosphate aldolase FD63_03565 PF14760 Rnk N-terminus FD63_03565 PF01272 Transcription elongation factor, GreA/GreB, C-term FD63_03575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD63_03575 PF03466 LysR substrate binding domain FD63_03580 PF13192 Thioredoxin domain FD63_03580 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD63_03585 PF00578 AhpC/TSA family FD63_03585 PF10417 C-terminal domain of 1-Cys peroxiredoxin FD63_03590 PF05175 Methyltransferase small domain FD63_03590 PF17827 PrmC N-terminal domain FD63_03600 PF00593 TonB dependent receptor FD63_03600 PF07715 TonB-dependent Receptor Plug Domain FD63_03605 PF07715 TonB-dependent Receptor Plug Domain FD63_03605 PF00593 TonB dependent receptor FD63_03610 PF12848 ABC transporter FD63_03610 PF00005 ABC transporter FD63_03620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD63_03620 PF03466 LysR substrate binding domain FD63_03635 PF04185 Phosphoesterase family FD63_03635 PF05506 Domain of unknown function (DUF756) FD63_03660 PF03462 PCRF domain FD63_03660 PF00472 RF-1 domain FD63_03665 PF01488 Shikimate / quinate 5-dehydrogenase FD63_03665 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FD63_03665 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FD63_03675 PF03550 Outer membrane lipoprotein LolB FD63_03680 PF08544 GHMP kinases C terminal FD63_03680 PF00288 GHMP kinases N terminal domain FD63_03690 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FD63_03690 PF14572 Phosphoribosyl synthetase-associated domain FD63_03695 PF01386 Ribosomal L25p family FD63_03695 PF14693 Ribosomal protein TL5, C-terminal domain FD63_03700 PF01195 Peptidyl-tRNA hydrolase FD63_03705 PF06071 Protein of unknown function (DUF933) FD63_03705 PF01926 50S ribosome-binding GTPase FD63_03725 PF03144 Elongation factor Tu domain 2 FD63_03725 PF03143 Elongation factor Tu C-terminal domain FD63_03725 PF00009 Elongation factor Tu GTP binding domain FD63_03735 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FD63_03740 PF00467 KOW motif FD63_03740 PF02357 Transcription termination factor nusG FD63_03745 PF03946 Ribosomal protein L11, N-terminal domain FD63_03745 PF00298 Ribosomal protein L11, RNA binding domain FD63_03750 PF00687 Ribosomal protein L1p/L10e family FD63_03755 PF00466 Ribosomal protein L10 FD63_03760 PF00542 Ribosomal protein L7/L12 C-terminal domain FD63_03760 PF16320 Ribosomal protein L7/L12 dimerisation domain FD63_03765 PF10385 RNA polymerase beta subunit external 1 domain FD63_03765 PF00562 RNA polymerase Rpb2, domain 6 FD63_03765 PF04560 RNA polymerase Rpb2, domain 7 FD63_03765 PF04563 RNA polymerase beta subunit FD63_03765 PF04565 RNA polymerase Rpb2, domain 3 FD63_03765 PF04561 RNA polymerase Rpb2, domain 2 FD63_03770 PF04983 RNA polymerase Rpb1, domain 3 FD63_03770 PF05000 RNA polymerase Rpb1, domain 4 FD63_03770 PF00623 RNA polymerase Rpb1, domain 2 FD63_03770 PF04997 RNA polymerase Rpb1, domain 1 FD63_03770 PF04998 RNA polymerase Rpb1, domain 5 FD63_03775 PF00164 Ribosomal protein S12/S23 FD63_03780 PF00177 Ribosomal protein S7p/S5e FD63_03785 PF00679 Elongation factor G C-terminus FD63_03785 PF03764 Elongation factor G, domain IV FD63_03785 PF14492 Elongation Factor G, domain II FD63_03785 PF00009 Elongation factor Tu GTP binding domain FD63_03785 PF03144 Elongation factor Tu domain 2 FD63_03790 PF00009 Elongation factor Tu GTP binding domain FD63_03790 PF03143 Elongation factor Tu C-terminal domain FD63_03790 PF03144 Elongation factor Tu domain 2 FD63_03795 PF00338 Ribosomal protein S10p/S20e FD63_03800 PF00297 Ribosomal protein L3 FD63_03805 PF00573 Ribosomal protein L4/L1 family FD63_03810 PF00276 Ribosomal protein L23 FD63_03815 PF03947 Ribosomal Proteins L2, C-terminal domain FD63_03815 PF00181 Ribosomal Proteins L2, RNA binding domain FD63_03820 PF00203 Ribosomal protein S19 FD63_03825 PF00237 Ribosomal protein L22p/L17e FD63_03830 PF00189 Ribosomal protein S3, C-terminal domain FD63_03830 PF07650 KH domain FD63_03835 PF00252 Ribosomal protein L16p/L10e FD63_03840 PF00831 Ribosomal L29 protein FD63_03845 PF00366 Ribosomal protein S17 FD63_03850 PF00238 Ribosomal protein L14p/L23e FD63_03855 PF00467 KOW motif FD63_03855 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FD63_03860 PF00281 Ribosomal protein L5 FD63_03860 PF00673 ribosomal L5P family C-terminus FD63_03865 PF00253 Ribosomal protein S14p/S29e FD63_03870 PF00410 Ribosomal protein S8 FD63_03875 PF00347 Ribosomal protein L6 FD63_03880 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FD63_03885 PF00333 Ribosomal protein S5, N-terminal domain FD63_03885 PF03719 Ribosomal protein S5, C-terminal domain FD63_03890 PF00327 Ribosomal protein L30p/L7e FD63_03895 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FD63_03900 PF00344 SecY translocase FD63_03905 PF00416 Ribosomal protein S13/S18 FD63_03910 PF00411 Ribosomal protein S11 FD63_03915 PF00163 Ribosomal protein S4/S9 N-terminal domain FD63_03915 PF01479 S4 domain FD63_03920 PF01000 RNA polymerase Rpb3/RpoA insert domain FD63_03920 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FD63_03920 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FD63_03925 PF01196 Ribosomal protein L17 FD63_03930 PF02600 Disulfide bond formation protein DsbB FD63_03940 PF01474 Class-II DAHP synthetase family FD63_03960 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FD63_03970 PF00056 lactate/malate dehydrogenase, NAD binding domain FD63_03970 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FD63_03985 PF16177 Acetyl-coenzyme A synthetase N-terminus FD63_03985 PF00501 AMP-binding enzyme FD63_03985 PF13193 AMP-binding enzyme C-terminal domain FD63_03990 PF00043 Glutathione S-transferase, C-terminal domain FD63_03990 PF02798 Glutathione S-transferase, N-terminal domain FD63_04010 PF03009 Glycerophosphoryl diester phosphodiesterase family FD63_04035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FD63_04035 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD63_04040 PF00107 Zinc-binding dehydrogenase FD63_04040 PF08240 Alcohol dehydrogenase GroES-like domain FD63_04045 PF00248 Aldo/keto reductase family FD63_04070 PF00223 Photosystem I psaA/psaB protein FD63_04070 PF00691 OmpA family FD63_04085 PF00849 RNA pseudouridylate synthase FD63_04090 PF00155 Aminotransferase class I and II FD63_04100 PF00528 Binding-protein-dependent transport system inner membrane component FD63_04105 PF00528 Binding-protein-dependent transport system inner membrane component FD63_04110 PF00005 ABC transporter FD63_04110 PF12857 TOBE-like domain FD63_04110 PF17850 CysA C-terminal regulatory domain FD63_04120 PF08240 Alcohol dehydrogenase GroES-like domain FD63_04120 PF00107 Zinc-binding dehydrogenase FD63_04125 PF10459 Peptidase S46 FD63_04130 PF00300 Histidine phosphatase superfamily (branch 1) FD63_04135 PF02875 Mur ligase family, glutamate ligase domain FD63_04135 PF08245 Mur ligase middle domain FD63_04150 PF00156 Phosphoribosyl transferase domain FD63_04155 PF04305 Protein of unknown function (DUF455) FD63_04170 PF00149 Calcineurin-like phosphoesterase FD63_04175 PF01569 PAP2 superfamily FD63_04180 PF13439 Glycosyltransferase Family 4 FD63_04180 PF00534 Glycosyl transferases group 1 FD63_04185 PF02541 Ppx/GppA phosphatase family FD63_04190 PF17941 Polyphosphate kinase C-terminal domain 1 FD63_04190 PF13090 Polyphosphate kinase C-terminal domain 2 FD63_04190 PF02503 Polyphosphate kinase middle domain FD63_04190 PF13089 Polyphosphate kinase N-terminal domain FD63_04195 PF00989 PAS fold FD63_04195 PF00512 His Kinase A (phospho-acceptor) domain FD63_04195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_04195 PF11808 Phosphate regulon sensor protein PhoR FD63_04200 PF00072 Response regulator receiver domain FD63_04200 PF00486 Transcriptional regulatory protein, C terminal FD63_04205 PF01435 Peptidase family M48 FD63_04205 PF13181 Tetratricopeptide repeat FD63_04210 PF00462 Glutaredoxin FD63_04220 PF00180 Isocitrate/isopropylmalate dehydrogenase FD63_04220 PF18324 Hypothetical protein TT1725 FD63_04260 PF05698 Bacterial trigger factor protein (TF) C-terminus FD63_04260 PF05697 Bacterial trigger factor protein (TF) FD63_04265 PF00574 Clp protease FD63_04270 PF07724 AAA domain (Cdc48 subfamily) FD63_04270 PF10431 C-terminal, D2-small domain, of ClpB protein FD63_04270 PF06689 ClpX C4-type zinc finger FD63_04275 PF00004 ATPase family associated with various cellular activities (AAA) FD63_04275 PF02190 ATP-dependent protease La (LON) substrate-binding domain FD63_04275 PF05362 Lon protease (S16) C-terminal proteolytic domain FD63_04280 PF00216 Bacterial DNA-binding protein FD63_04310 PF01476 LysM domain FD63_04310 PF05257 CHAP domain FD63_04315 PF16123 Hydroxyacylglutathione hydrolase C-terminus FD63_04315 PF00753 Metallo-beta-lactamase superfamily FD63_04325 PF00075 RNase H FD63_04330 PF00929 Exonuclease FD63_04355 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FD63_04365 PF12706 Beta-lactamase superfamily domain FD63_04370 PF06463 Molybdenum Cofactor Synthesis C FD63_04370 PF04055 Radical SAM superfamily FD63_04380 PF01967 MoaC family FD63_04385 PF02597 ThiS family FD63_04390 PF02391 MoaE protein FD63_04405 PF12170 DNA polymerase III tau subunit V interacting with alpha FD63_04405 PF12169 DNA polymerase III subunits gamma and tau domain III FD63_04405 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FD63_04410 PF02575 YbaB/EbfC DNA-binding family FD63_04415 PF13662 Toprim domain FD63_04415 PF02132 RecR protein FD63_04420 PF01230 HIT domain FD63_04430 PF11992 Domain of unknown function (DUF3488) FD63_04430 PF13559 Domain of unknown function (DUF4129) FD63_04430 PF01841 Transglutaminase-like superfamily FD63_04440 PF17863 AAA lid domain FD63_04440 PF07726 ATPase family associated with various cellular activities (AAA) FD63_04460 PF02545 Maf-like protein FD63_04465 PF02620 Large ribosomal RNA subunit accumulation protein YceD FD63_04470 PF01783 Ribosomal L32p protein family FD63_04475 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FD63_04475 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FD63_04480 PF00698 Acyl transferase domain FD63_04490 PF00550 Phosphopantetheine attachment site FD63_04495 PF00109 Beta-ketoacyl synthase, N-terminal domain FD63_04495 PF02801 Beta-ketoacyl synthase, C-terminal domain FD63_04500 PF00425 chorismate binding enzyme FD63_04500 PF04715 Anthranilate synthase component I, N terminal region FD63_04505 PF02618 YceG-like family FD63_04510 PF02223 Thymidylate kinase FD63_04515 PF09115 DNA polymerase III, delta subunit, C terminal FD63_04530 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system FD63_04535 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system FD63_04540 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FD63_04540 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FD63_04570 PF01336 OB-fold nucleic acid binding domain FD63_04570 PF14579 Helix-hairpin-helix motif FD63_04570 PF02811 PHP domain FD63_04570 PF07733 Bacterial DNA polymerase III alpha NTPase domain FD63_04570 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FD63_04585 PF00717 Peptidase S24-like FD63_04585 PF01726 LexA DNA binding domain FD63_04590 PF00285 Citrate synthase, C-terminal domain FD63_04600 PF00285 Citrate synthase, C-terminal domain FD63_04605 PF00694 Aconitase C-terminal domain FD63_04605 PF00330 Aconitase family (aconitate hydratase) FD63_04615 PF04303 PrpF protein FD63_04620 PF07715 TonB-dependent Receptor Plug Domain FD63_04620 PF00593 TonB dependent receptor FD63_04630 PF00207 Alpha-2-macroglobulin family FD63_04630 PF01835 MG2 domain FD63_04630 PF17962 Bacterial macroglobulin domain 6 FD63_04630 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FD63_04630 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FD63_04630 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FD63_04630 PF07703 Alpha-2-macroglobulin bait region domain FD63_04630 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FD63_04650 PF06832 Penicillin-Binding Protein C-terminus Family FD63_04650 PF00905 Penicillin binding protein transpeptidase domain FD63_04650 PF00912 Transglycosylase FD63_04660 PF08534 Redoxin FD63_04670 PF01556 DnaJ C terminal domain FD63_04670 PF00226 DnaJ domain FD63_04675 PF00072 Response regulator receiver domain FD63_04680 PF08240 Alcohol dehydrogenase GroES-like domain FD63_04680 PF00107 Zinc-binding dehydrogenase FD63_04685 PF12221 Bacterial membrane protein N terminal FD63_04685 PF01145 SPFH domain / Band 7 family FD63_04690 PF01145 SPFH domain / Band 7 family FD63_04700 PF00709 Adenylosuccinate synthetase FD63_04710 PF01433 Peptidase family M1 domain FD63_04725 PF02384 N-6 DNA Methylase FD63_04730 PF00665 Integrase core domain FD63_04730 PF13333 Integrase core domain FD63_04730 PF13276 HTH-like domain FD63_04735 PF01527 Transposase FD63_04750 PF13683 Integrase core domain FD63_04750 PF13276 HTH-like domain FD63_04755 PF01527 Transposase FD63_04790 PF17755 UvrA DNA-binding domain FD63_04815 PF00107 Zinc-binding dehydrogenase FD63_04815 PF08240 Alcohol dehydrogenase GroES-like domain FD63_04815 PF13823 Alcohol dehydrogenase GroES-associated FD63_04825 PF02585 GlcNAc-PI de-N-acetylase FD63_04830 PF13649 Methyltransferase domain FD63_04840 PF18011 C-terminal domain found in long catalases FD63_04840 PF06628 Catalase-related immune-responsive FD63_04840 PF00199 Catalase FD63_04850 PF02347 Glycine cleavage system P-protein FD63_04870 PF00005 ABC transporter FD63_04870 PF03412 Peptidase C39 family FD63_04870 PF00664 ABC transporter transmembrane region FD63_04875 PF07690 Major Facilitator Superfamily FD63_04895 PF00884 Sulfatase FD63_04895 PF08019 Phosphoethanolamine transferase EptA/EptB FD63_04905 PF00072 Response regulator receiver domain FD63_04905 PF00486 Transcriptional regulatory protein, C terminal FD63_04910 PF02702 Osmosensitive K+ channel His kinase sensor domain FD63_04910 PF13493 Domain of unknown function (DUF4118) FD63_04910 PF00512 His Kinase A (phospho-acceptor) domain FD63_04910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_04925 PF03776 Septum formation topological specificity factor MinE FD63_04930 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FD63_04935 PF05209 Septum formation inhibitor MinC, N-terminal domain FD63_04935 PF03775 Septum formation inhibitor MinC, C-terminal domain FD63_04945 PF07730 Histidine kinase FD63_04950 PF00196 Bacterial regulatory proteins, luxR family FD63_04950 PF00072 Response regulator receiver domain FD63_04965 PF00730 HhH-GPD superfamily base excision DNA repair protein FD63_04975 PF00535 Glycosyl transferase family 2 FD63_04980 PF00912 Transglycosylase FD63_04980 PF14814 Bifunctional transglycosylase second domain FD63_04980 PF00905 Penicillin binding protein transpeptidase domain FD63_04990 PF04851 Type III restriction enzyme, res subunit FD63_04990 PF13307 Helicase C-terminal domain FD63_04995 PF00814 Glycoprotease family FD63_05025 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FD63_05025 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FD63_05030 PF00072 Response regulator receiver domain FD63_05035 PF00072 Response regulator receiver domain FD63_05040 PF01584 CheW-like domain FD63_05045 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FD63_05045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_05050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_05050 PF01627 Hpt domain FD63_05050 PF01584 CheW-like domain FD63_05050 PF00072 Response regulator receiver domain FD63_05055 PF01339 CheB methylesterase FD63_05055 PF00072 Response regulator receiver domain FD63_05070 PF01527 Transposase FD63_05075 PF13683 Integrase core domain FD63_05075 PF13276 HTH-like domain FD63_05080 PF01112 Asparaginase FD63_05085 PF03932 CutC family FD63_05105 PF01336 OB-fold nucleic acid binding domain FD63_05105 PF00152 tRNA synthetases class II (D, K and N) FD63_05105 PF02938 GAD domain FD63_05125 PF01709 Transcriptional regulator FD63_05130 PF02075 Crossover junction endodeoxyribonuclease RuvC FD63_05135 PF01330 RuvA N terminal domain FD63_05135 PF07499 RuvA, C-terminal domain FD63_05140 PF02705 K+ potassium transporter FD63_05145 PF17864 RuvB AAA lid domain FD63_05145 PF05496 Holliday junction DNA helicase RuvB P-loop domain FD63_05145 PF05491 RuvB C-terminal winged helix domain FD63_05150 PF03061 Thioesterase superfamily FD63_05155 PF01618 MotA/TolQ/ExbB proton channel family FD63_05160 PF02472 Biopolymer transport protein ExbD/TolR FD63_05170 PF04052 TolB amino-terminal domain FD63_05170 PF07676 WD40-like Beta Propeller Repeat FD63_05175 PF00691 OmpA family FD63_05185 PF04055 Radical SAM superfamily FD63_05190 PF06508 Queuosine biosynthesis protein QueC FD63_05215 PF09382 RQC domain FD63_05215 PF00271 Helicase conserved C-terminal domain FD63_05215 PF16124 RecQ zinc-binding FD63_05215 PF00270 DEAD/DEAH box helicase FD63_05215 PF00570 HRDC domain FD63_05225 PF00210 Ferritin-like domain FD63_05230 PF00270 DEAD/DEAH box helicase FD63_05230 PF04408 Helicase associated domain (HA2) FD63_05230 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FD63_05230 PF00271 Helicase conserved C-terminal domain FD63_05230 PF11898 Domain of unknown function (DUF3418) FD63_05235 PF00654 Voltage gated chloride channel FD63_05245 PF04055 Radical SAM superfamily FD63_05245 PF13186 Iron-sulfur cluster-binding domain FD63_05250 PF05402 Coenzyme PQQ synthesis protein D (PqqD) FD63_05255 PF03070 TENA/THI-4/PQQC family FD63_05260 PF12706 Beta-lactamase superfamily domain FD63_05270 PF02824 TGS domain FD63_05270 PF13291 ACT domain FD63_05270 PF04607 Region found in RelA / SpoT proteins FD63_05320 PF01370 NAD dependent epimerase/dehydratase family FD63_05320 PF02222 ATP-grasp domain FD63_05330 PF04376 Arginine-tRNA-protein transferase, N terminus FD63_05330 PF04377 Arginine-tRNA-protein transferase, C terminus FD63_05365 PF17760 UvrA interaction domain FD63_05365 PF17755 UvrA DNA-binding domain FD63_05365 PF00005 ABC transporter FD63_05370 PF00829 Ribosomal prokaryotic L21 protein FD63_05375 PF01016 Ribosomal L27 protein FD63_05380 PF01926 50S ribosome-binding GTPase FD63_05380 PF01018 GTP1/OBG FD63_05385 PF01649 Ribosomal protein S20 FD63_05390 PF03023 Lipid II flippase MurJ FD63_05405 PF01687 Riboflavin kinase FD63_05405 PF06574 FAD synthetase FD63_05410 PF08264 Anticodon-binding domain of tRNA FD63_05410 PF00133 tRNA synthetases class I (I, L, M and V) FD63_05410 PF06827 Zinc finger found in FPG and IleRS FD63_05415 PF01252 Signal peptidase (SPase) II FD63_05420 PF02401 LytB protein FD63_05435 PF06481 COX Aromatic Rich Motif FD63_05435 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FD63_05440 PF00115 Cytochrome C and Quinol oxidase polypeptide I FD63_05445 PF00510 Cytochrome c oxidase subunit III FD63_05450 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FD63_05460 PF00155 Aminotransferase class I and II FD63_05465 PF18073 Rubredoxin metal binding domain FD63_05470 PF05656 Protein of unknown function (DUF805) FD63_05495 PF00072 Response regulator receiver domain FD63_05495 PF00486 Transcriptional regulatory protein, C terminal FD63_05525 PF01313 Bacterial export proteins, family 3 FD63_05530 PF00813 FliP family FD63_05545 PF00771 FHIPEP family FD63_05550 PF01312 FlhB HrpN YscU SpaS Family FD63_05565 PF01514 Secretory protein of YscJ/FliF family FD63_05580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FD63_05580 PF02874 ATP synthase alpha/beta family, beta-barrel domain FD63_05580 PF18269 T3SS EscN ATPase C-terminal domain FD63_05595 PF12833 Helix-turn-helix domain FD63_05615 PF01464 Transglycosylase SLT domain FD63_05620 PF00920 Dehydratase family FD63_05630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD63_05630 PF03466 LysR substrate binding domain FD63_05640 PF00171 Aldehyde dehydrogenase family FD63_05645 PF13407 Periplasmic binding protein domain FD63_05650 PF00005 ABC transporter FD63_05655 PF02653 Branched-chain amino acid transport system / permease component FD63_05660 PF02653 Branched-chain amino acid transport system / permease component FD63_05670 PF14508 Glycosyl-hydrolase 97 N-terminal FD63_05670 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation FD63_05670 PF10566 Glycoside hydrolase 97 FD63_05675 PF13417 Glutathione S-transferase, N-terminal domain FD63_05675 PF00043 Glutathione S-transferase, C-terminal domain FD63_05685 PF00999 Sodium/hydrogen exchanger family FD63_05695 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FD63_05700 PF01263 Aldose 1-epimerase FD63_05710 PF00448 SRP54-type protein, GTPase domain FD63_05710 PF02978 Signal peptide binding domain FD63_05710 PF02881 SRP54-type protein, helical bundle domain FD63_05715 PF03060 Nitronate monooxygenase FD63_05725 PF00886 Ribosomal protein S16 FD63_05730 PF01782 RimM N-terminal domain FD63_05730 PF05239 PRC-barrel domain FD63_05735 PF01746 tRNA (Guanine-1)-methyltransferase FD63_05740 PF01245 Ribosomal protein L19 FD63_05745 PF01554 MatE FD63_05755 PF01479 S4 domain FD63_05760 PF00141 Peroxidase FD63_05775 PF05192 MutS domain III FD63_05775 PF05190 MutS family domain IV FD63_05775 PF00488 MutS domain V FD63_05775 PF01624 MutS domain I FD63_05775 PF05188 MutS domain II FD63_05785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD63_05790 PF03601 Conserved hypothetical protein 698 FD63_05795 PF01545 Cation efflux family FD63_05805 PF00378 Enoyl-CoA hydratase/isomerase FD63_05805 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FD63_05805 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FD63_05815 PF04542 Sigma-70 region 2 FD63_05815 PF08281 Sigma-70, region 4 FD63_05825 PF13180 PDZ domain FD63_05830 PF00009 Elongation factor Tu GTP binding domain FD63_05830 PF00679 Elongation factor G C-terminus FD63_05830 PF03144 Elongation factor Tu domain 2 FD63_05830 PF06421 GTP-binding protein LepA C-terminus FD63_05835 PF10502 Signal peptidase, peptidase S26 FD63_05845 PF00035 Double-stranded RNA binding motif FD63_05845 PF14622 Ribonuclease-III-like FD63_05850 PF01926 50S ribosome-binding GTPase FD63_05850 PF07650 KH domain FD63_05860 PF00486 Transcriptional regulatory protein, C terminal FD63_05860 PF00072 Response regulator receiver domain FD63_05880 PF00933 Glycosyl hydrolase family 3 N terminal domain FD63_05890 PF01048 Phosphorylase superfamily FD63_05895 PF00313 'Cold-shock' DNA-binding domain FD63_05900 PF01494 FAD binding domain FD63_05910 PF00271 Helicase conserved C-terminal domain FD63_05910 PF08494 DEAD/H associated FD63_05910 PF00270 DEAD/DEAH box helicase FD63_05915 PF04679 ATP dependent DNA ligase C terminal region FD63_05915 PF01068 ATP dependent DNA ligase domain FD63_05915 PF04675 DNA ligase N terminus FD63_05920 PF04675 DNA ligase N terminus FD63_05920 PF01068 ATP dependent DNA ligase domain FD63_05920 PF04679 ATP dependent DNA ligase C terminal region FD63_05940 PF00072 Response regulator receiver domain FD63_05940 PF00990 Diguanylate cyclase, GGDEF domain FD63_05955 PF00012 Hsp70 protein FD63_05965 PF00108 Thiolase, N-terminal domain FD63_05965 PF02803 Thiolase, C-terminal domain FD63_05970 PF03797 Autotransporter beta-domain FD63_05970 PF00082 Subtilase family FD63_05970 PF12951 Passenger-associated-transport-repeat FD63_05975 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FD63_05975 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FD63_05995 PF01642 Methylmalonyl-CoA mutase FD63_05995 PF02310 B12 binding domain FD63_06055 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FD63_06055 PF02929 Beta galactosidase small chain FD63_06055 PF16353 Domain of unknown function(DUF4981) FD63_06055 PF02837 Glycosyl hydrolases family 2, sugar binding domain FD63_06055 PF00703 Glycosyl hydrolases family 2 FD63_06060 PF00392 Bacterial regulatory proteins, gntR family FD63_06060 PF07729 FCD domain FD63_06065 PF13360 PQQ-like domain FD63_06065 PF01011 PQQ enzyme repeat FD63_06070 PF00072 Response regulator receiver domain FD63_06070 PF01627 Hpt domain FD63_06070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_06070 PF00512 His Kinase A (phospho-acceptor) domain FD63_06070 PF00672 HAMP domain FD63_06075 PF13472 GDSL-like Lipase/Acylhydrolase family FD63_06095 PF01863 Protein of unknown function DUF45 FD63_06110 PF01258 Prokaryotic dksA/traR C4-type zinc finger FD63_06140 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus FD63_06140 PF05175 Methyltransferase small domain FD63_06150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FD63_06155 PF03831 PhnA domain FD63_06155 PF08274 PhnA Zinc-Ribbon FD63_06160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FD63_06170 PF07690 Major Facilitator Superfamily FD63_06200 PF09924 Uncharacterised conserved protein (DUF2156) FD63_06200 PF03706 Lysylphosphatidylglycerol synthase TM region FD63_06210 PF01042 Endoribonuclease L-PSP FD63_06255 PF04545 Sigma-70, region 4 FD63_06255 PF04542 Sigma-70 region 2 FD63_06280 PF01588 Putative tRNA binding domain FD63_06280 PF09334 tRNA synthetases class I (M) FD63_06290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FD63_06300 PF00324 Amino acid permease FD63_06305 PF02574 Homocysteine S-methyltransferase FD63_06315 PF02592 Putative vitamin uptake transporter FD63_06330 PF00085 Thioredoxin FD63_06340 PF08264 Anticodon-binding domain of tRNA FD63_06340 PF13603 Leucyl-tRNA synthetase, Domain 2 FD63_06340 PF00133 tRNA synthetases class I (I, L, M and V) FD63_06355 PF01467 Cytidylyltransferase-like FD63_06370 PF02590 Predicted SPOUT methyltransferase FD63_06375 PF07715 TonB-dependent Receptor Plug Domain FD63_06375 PF00593 TonB dependent receptor FD63_06385 PF04402 Protein of unknown function (DUF541) FD63_06390 PF02545 Maf-like protein FD63_06395 PF10150 Ribonuclease E/G family FD63_06395 PF00575 S1 RNA binding domain FD63_06405 PF01523 Putative modulator of DNA gyrase FD63_06410 PF04751 Protein of unknown function (DUF615) FD63_06415 PF01523 Putative modulator of DNA gyrase FD63_06440 PF05638 Type VI secretion system effector, Hcp FD63_06465 PF10431 C-terminal, D2-small domain, of ClpB protein FD63_06465 PF17871 AAA lid domain FD63_06465 PF07724 AAA domain (Cdc48 subfamily) FD63_06465 PF00004 ATPase family associated with various cellular activities (AAA) FD63_06490 PF04717 Type VI secretion system, phage-baseplate injector FD63_06530 PF00069 Protein kinase domain FD63_06530 PF03793 PASTA domain FD63_06545 PF03466 LysR substrate binding domain FD63_06545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD63_06555 PF03150 Di-haem cytochrome c peroxidase FD63_06555 PF00034 Cytochrome c FD63_06560 PF00486 Transcriptional regulatory protein, C terminal FD63_06560 PF00072 Response regulator receiver domain FD63_06565 PF00348 Polyprenyl synthetase FD63_06570 PF02609 Exonuclease VII small subunit FD63_06575 PF09179 TilS substrate binding domain FD63_06575 PF11734 TilS substrate C-terminal domain FD63_06575 PF01171 PP-loop family FD63_06585 PF00245 Alkaline phosphatase FD63_06590 PF00375 Sodium:dicarboxylate symporter family FD63_06600 PF03061 Thioesterase superfamily FD63_06615 PF00877 NlpC/P60 family FD63_06620 PF00877 NlpC/P60 family FD63_06625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FD63_06630 PF04235 Protein of unknown function (DUF418) FD63_06635 PF01266 FAD dependent oxidoreductase FD63_06640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FD63_06640 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD63_06645 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA FD63_06650 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA FD63_06675 PF05598 Transposase domain (DUF772) FD63_06690 PF01431 Peptidase family M13 FD63_06690 PF05649 Peptidase family M13 FD63_06705 PF13181 Tetratricopeptide repeat FD63_06715 PF00593 TonB dependent receptor FD63_06715 PF07715 TonB-dependent Receptor Plug Domain FD63_06720 PF13683 Integrase core domain FD63_06720 PF13276 HTH-like domain FD63_06725 PF01527 Transposase FD63_06730 PF00593 TonB dependent receptor FD63_06730 PF07715 TonB-dependent Receptor Plug Domain FD63_06740 PF10609 NUBPL iron-transfer P-loop NTPase FD63_06745 PF00692 dUTPase FD63_06750 PF06271 RDD family FD63_06770 PF03449 Transcription elongation factor, N-terminal FD63_06770 PF01272 Transcription elongation factor, GreA/GreB, C-term FD63_06785 PF00293 NUDIX domain FD63_06790 PF05872 Bacterial protein of unknown function (DUF853) FD63_06795 PF06737 Transglycosylase-like domain FD63_06800 PF02666 Phosphatidylserine decarboxylase FD63_06805 PF02630 SCO1/SenC FD63_06810 PF05175 Methyltransferase small domain FD63_06815 PF01264 Chorismate synthase FD63_06820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FD63_06820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FD63_06825 PF01118 Semialdehyde dehydrogenase, NAD binding domain FD63_06825 PF02774 Semialdehyde dehydrogenase, dimerisation domain FD63_06835 PF01416 tRNA pseudouridine synthase FD63_06840 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FD63_06845 PF05816 Toxic anion resistance protein (TelA) FD63_06855 PF03466 LysR substrate binding domain FD63_06855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD63_06860 PF00291 Pyridoxal-phosphate dependent enzyme FD63_06870 PF00290 Tryptophan synthase alpha chain FD63_06875 PF01039 Carboxyl transferase domain FD63_06875 PF17848 Acetyl-coA carboxylase zinc finger domain FD63_06880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FD63_06880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FD63_06880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FD63_06880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FD63_06895 PF01965 DJ-1/PfpI family FD63_06905 PF00121 Triosephosphate isomerase FD63_06920 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FD63_06925 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FD63_06930 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FD63_06935 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FD63_06945 PF10531 SLBB domain FD63_06945 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FD63_06945 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FD63_06950 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FD63_06950 PF00384 Molybdopterin oxidoreductase FD63_06950 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FD63_06955 PF00146 NADH dehydrogenase FD63_06960 PF12838 4Fe-4S dicluster domain FD63_06965 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FD63_06970 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FD63_06975 PF00361 Proton-conducting membrane transporter FD63_06975 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FD63_06980 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FD63_06980 PF00361 Proton-conducting membrane transporter FD63_06985 PF00361 Proton-conducting membrane transporter FD63_06995 PF02576 RimP N-terminal domain FD63_06995 PF17384 RimP C-terminal SH3 domain FD63_07000 PF13184 NusA-like KH domain FD63_07000 PF00575 S1 RNA binding domain FD63_07000 PF08529 NusA N-terminal domain FD63_07005 PF00009 Elongation factor Tu GTP binding domain FD63_07005 PF08364 Bacterial translation initiation factor IF-2 associated region FD63_07005 PF11987 Translation-initiation factor 2 FD63_07005 PF04760 Translation initiation factor IF-2, N-terminal region FD63_07010 PF02033 Ribosome-binding factor A FD63_07015 PF01509 TruB family pseudouridylate synthase (N terminal domain) FD63_07015 PF16198 tRNA pseudouridylate synthase B C-terminal domain FD63_07015 PF09157 Pseudouridine synthase II TruB, C-terminal FD63_07020 PF00312 Ribosomal protein S15 FD63_07025 PF00575 S1 RNA binding domain FD63_07025 PF03725 3' exoribonuclease family, domain 2 FD63_07025 PF00013 KH domain FD63_07025 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FD63_07025 PF01138 3' exoribonuclease family, domain 1 FD63_07030 PF00563 EAL domain FD63_07030 PF00990 Diguanylate cyclase, GGDEF domain FD63_07030 PF03707 Bacterial signalling protein N terminal repeat FD63_07030 PF13188 PAS domain FD63_07055 PF00672 HAMP domain FD63_07055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_07055 PF02743 Cache domain FD63_07060 PF02203 Tar ligand binding domain homologue FD63_07060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_07060 PF00672 HAMP domain FD63_07065 PF01584 CheW-like domain FD63_07085 PF00570 HRDC domain FD63_07085 PF01612 3'-5' exonuclease FD63_07105 PF04362 Bacterial Fe(2+) trafficking FD63_07110 PF14815 NUDIX domain FD63_07110 PF00730 HhH-GPD superfamily base excision DNA repair protein FD63_07110 PF00633 Helix-hairpin-helix motif FD63_07110 PF10576 Iron-sulfur binding domain of endonuclease III FD63_07115 PF02881 SRP54-type protein, helical bundle domain FD63_07115 PF00448 SRP54-type protein, GTPase domain FD63_07125 PF05544 Proline racemase FD63_07130 PF01266 FAD dependent oxidoreductase FD63_07145 PF00701 Dihydrodipicolinate synthetase family FD63_07150 PF00171 Aldehyde dehydrogenase family FD63_07155 PF01321 Creatinase/Prolidase N-terminal domain FD63_07155 PF00557 Metallopeptidase family M24 FD63_07170 PF13520 Amino acid permease FD63_07195 PF00593 TonB dependent receptor FD63_07195 PF07715 TonB-dependent Receptor Plug Domain FD63_07200 PF07532 Bacterial Ig-like domain (group 4) FD63_07205 PF04616 Glycosyl hydrolases family 43 FD63_07215 PF07715 TonB-dependent Receptor Plug Domain FD63_07215 PF00593 TonB dependent receptor FD63_07225 PF07715 TonB-dependent Receptor Plug Domain FD63_07225 PF00593 TonB dependent receptor FD63_07230 PF02615 Malate/L-lactate dehydrogenase FD63_07235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_07235 PF00183 Hsp90 protein FD63_07245 PF01467 Cytidylyltransferase-like FD63_07255 PF00037 4Fe-4S binding domain FD63_07265 PF00753 Metallo-beta-lactamase superfamily FD63_07270 PF00759 Glycosyl hydrolase family 9 FD63_07270 PF02927 Cellulase N-terminal ig-like domain FD63_07285 PF00202 Aminotransferase class-III FD63_07295 PF02547 Queuosine biosynthesis protein FD63_07300 PF01702 Queuine tRNA-ribosyltransferase FD63_07305 PF02699 Preprotein translocase subunit FD63_07310 PF07549 SecD/SecF GG Motif FD63_07310 PF13721 SecD export protein N-terminal TM region FD63_07310 PF02355 Protein export membrane protein FD63_07315 PF07549 SecD/SecF GG Motif FD63_07315 PF02355 Protein export membrane protein FD63_07320 PF00459 Inositol monophosphatase family FD63_07325 PF00588 SpoU rRNA Methylase family FD63_07335 PF00360 Phytochrome region FD63_07335 PF00990 Diguanylate cyclase, GGDEF domain FD63_07335 PF01590 GAF domain FD63_07335 PF00563 EAL domain FD63_07340 PF04055 Radical SAM superfamily FD63_07345 PF09285 Elongation factor P, C-terminal FD63_07345 PF08207 Elongation factor P (EF-P) KOW-like domain FD63_07345 PF01132 Elongation factor P (EF-P) OB domain FD63_07350 PF06736 Protein of unknown function (DUF1211) FD63_07355 PF01979 Amidohydrolase family FD63_07365 PF13419 Haloacid dehalogenase-like hydrolase FD63_07375 PF01095 Pectinesterase FD63_07380 PF00295 Glycosyl hydrolases family 28 FD63_07390 PF01551 Peptidase family M23 FD63_07390 PF08460 Bacterial SH3 domain FD63_07395 PF01979 Amidohydrolase family FD63_07405 PF01258 Prokaryotic dksA/traR C4-type zinc finger FD63_07430 PF13360 PQQ-like domain FD63_07430 PF01011 PQQ enzyme repeat FD63_07450 PF00529 HlyD membrane-fusion protein of T1SS FD63_07455 PF00561 alpha/beta hydrolase fold FD63_07465 PF02657 Fe-S metabolism associated domain FD63_07470 PF09190 DALR domain FD63_07470 PF01406 tRNA synthetases class I (C) catalytic domain FD63_07480 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FD63_07480 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FD63_07485 PF00764 Arginosuccinate synthase FD63_07495 PF00696 Amino acid kinase family FD63_07495 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase FD63_07505 PF01118 Semialdehyde dehydrogenase, NAD binding domain FD63_07510 PF00206 Lyase FD63_07525 PF00696 Amino acid kinase family FD63_07525 PF01472 PUA domain FD63_07530 PF00171 Aldehyde dehydrogenase family FD63_07555 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FD63_07555 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FD63_07565 PF00083 Sugar (and other) transporter FD63_07570 PF01520 N-acetylmuramoyl-L-alanine amidase FD63_07570 PF11741 AMIN domain FD63_07580 PF00132 Bacterial transferase hexapeptide (six repeats) FD63_07590 PF12626 Polymerase A arginine-rich C-terminus FD63_07590 PF12627 Probable RNA and SrmB- binding site of polymerase A FD63_07590 PF01743 Poly A polymerase head domain FD63_07595 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FD63_07600 PF02548 Ketopantoate hydroxymethyltransferase FD63_07605 PF02569 Pantoate-beta-alanine ligase FD63_07610 PF02261 Aspartate decarboxylase FD63_07615 PF00342 Phosphoglucose isomerase FD63_07645 PF14310 Fibronectin type III-like domain FD63_07645 PF01915 Glycosyl hydrolase family 3 C-terminal domain FD63_07645 PF00933 Glycosyl hydrolase family 3 N terminal domain FD63_07650 PF00474 Sodium:solute symporter family FD63_07655 PF03707 Bacterial signalling protein N terminal repeat FD63_07655 PF00990 Diguanylate cyclase, GGDEF domain FD63_07655 PF00563 EAL domain FD63_07660 PF00072 Response regulator receiver domain FD63_07660 PF02954 Bacterial regulatory protein, Fis family FD63_07670 PF04551 GcpE protein FD63_07675 PF01569 PAP2 superfamily FD63_07695 PF01565 FAD binding domain FD63_07695 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FD63_07700 PF01180 Dihydroorotate dehydrogenase FD63_07715 PF00171 Aldehyde dehydrogenase family FD63_07735 PF00742 Homoserine dehydrogenase FD63_07735 PF03447 Homoserine dehydrogenase, NAD binding domain FD63_07735 PF01842 ACT domain FD63_07735 PF00696 Amino acid kinase family FD63_07735 PF13840 ACT domain FD63_07740 PF00288 GHMP kinases N terminal domain FD63_07740 PF08544 GHMP kinases C terminal FD63_07745 PF13406 Transglycosylase SLT domain FD63_07755 PF00291 Pyridoxal-phosphate dependent enzyme FD63_07755 PF14821 Threonine synthase N terminus FD63_07765 PF00027 Cyclic nucleotide-binding domain FD63_07765 PF13545 Crp-like helix-turn-helix domain FD63_07770 PF13393 Histidyl-tRNA synthetase FD63_07770 PF03129 Anticodon binding domain FD63_07780 PF08029 HisG, C-terminal domain FD63_07780 PF01634 ATP phosphoribosyltransferase FD63_07785 PF00815 Histidinol dehydrogenase FD63_07790 PF00155 Aminotransferase class I and II FD63_07795 PF00475 Imidazoleglycerol-phosphate dehydratase FD63_07800 PF00117 Glutamine amidotransferase class-I FD63_07805 PF00977 Histidine biosynthesis protein FD63_07810 PF00977 Histidine biosynthesis protein FD63_07815 PF01502 Phosphoribosyl-AMP cyclohydrolase FD63_07815 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FD63_07840 PF03079 ARD/ARD' family FD63_07845 PF00596 Class II Aldolase and Adducin N-terminal domain FD63_07850 PF13520 Amino acid permease FD63_07855 PF13520 Amino acid permease FD63_07870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FD63_07870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FD63_07875 PF02913 FAD linked oxidases, C-terminal domain FD63_07875 PF01565 FAD binding domain FD63_07895 PF01132 Elongation factor P (EF-P) OB domain FD63_07895 PF08207 Elongation factor P (EF-P) KOW-like domain FD63_07895 PF09285 Elongation factor P, C-terminal FD63_07900 PF00106 short chain dehydrogenase FD63_07905 PF00682 HMGL-like FD63_07915 PF00378 Enoyl-CoA hydratase/isomerase FD63_07925 PF02421 Ferrous iron transport protein B FD63_07925 PF07664 Ferrous iron transport protein B C terminus FD63_07925 PF07670 Nucleoside recognition FD63_07945 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FD63_07945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FD63_07945 PF02824 TGS domain FD63_07945 PF03129 Anticodon binding domain FD63_07950 PF00707 Translation initiation factor IF-3, C-terminal domain FD63_07950 PF05198 Translation initiation factor IF-3, N-terminal domain FD63_07955 PF01632 Ribosomal protein L35 FD63_07960 PF00453 Ribosomal protein L20 FD63_07965 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FD63_07965 PF01409 tRNA synthetases class II core domain (F) FD63_07970 PF03147 Ferredoxin-fold anticodon binding domain FD63_07970 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FD63_07970 PF03484 tRNA synthetase B5 domain FD63_07970 PF03483 B3/4 domain FD63_07970 PF01588 Putative tRNA binding domain FD63_07975 PF00216 Bacterial DNA-binding protein FD63_07980 PF13411 MerR HTH family regulatory protein FD63_08000 PF02397 Bacterial sugar transferase FD63_08015 PF00534 Glycosyl transferases group 1 FD63_08015 PF13439 Glycosyltransferase Family 4 FD63_08025 PF14667 Polysaccharide biosynthesis C-terminal domain FD63_08040 PF03808 Glycosyl transferase WecB/TagA/CpsF family FD63_08050 PF02779 Transketolase, pyrimidine binding domain FD63_08050 PF02780 Transketolase, C-terminal domain FD63_08050 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FD63_08060 PF02770 Acyl-CoA dehydrogenase, middle domain FD63_08060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FD63_08060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FD63_08060 PF12806 Acetyl-CoA dehydrogenase C-terminal like FD63_08065 PF13533 Biotin-lipoyl like FD63_08115 PF02601 Exonuclease VII, large subunit FD63_08115 PF13742 OB-fold nucleic acid binding domain FD63_08125 PF03853 YjeF-related protein N-terminus FD63_08125 PF01256 Carbohydrate kinase FD63_08130 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FD63_08135 PF01520 N-acetylmuramoyl-L-alanine amidase FD63_08135 PF11741 AMIN domain FD63_08140 PF08676 MutL C terminal dimerisation domain FD63_08140 PF01119 DNA mismatch repair protein, C-terminal domain FD63_08155 PF07879 PHB/PHA accumulation regulator DNA-binding domain FD63_08155 PF05233 PHB accumulation regulatory domain FD63_08160 PF00106 short chain dehydrogenase FD63_08165 PF00749 tRNA synthetases class I (E and Q), catalytic domain FD63_08170 PF01435 Peptidase family M48 FD63_08175 PF00990 Diguanylate cyclase, GGDEF domain FD63_08175 PF00072 Response regulator receiver domain FD63_08175 PF00563 EAL domain FD63_08185 PF07152 YaeQ protein FD63_08190 PF00849 RNA pseudouridylate synthase FD63_08195 PF00313 'Cold-shock' DNA-binding domain FD63_08200 PF00043 Glutathione S-transferase, C-terminal domain FD63_08200 PF02798 Glutathione S-transferase, N-terminal domain FD63_08210 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FD63_08220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FD63_08220 PF00529 HlyD membrane-fusion protein of T1SS FD63_08225 PF00873 AcrB/AcrD/AcrF family FD63_08230 PF00156 Phosphoribosyl transferase domain FD63_08235 PF00270 DEAD/DEAH box helicase FD63_08235 PF03880 DbpA RNA binding domain FD63_08235 PF00271 Helicase conserved C-terminal domain FD63_08250 PF00545 ribonuclease FD63_08255 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FD63_08255 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FD63_08275 PF00854 POT family FD63_08305 PF01047 MarR family FD63_08315 PF00255 Glutathione peroxidase FD63_08320 PF00175 Oxidoreductase NAD-binding domain FD63_08320 PF00970 Oxidoreductase FAD-binding domain FD63_08330 PF00005 ABC transporter FD63_08340 PF02627 Carboxymuconolactone decarboxylase family FD63_08345 PF04542 Sigma-70 region 2 FD63_08345 PF08281 Sigma-70, region 4 FD63_08350 PF05681 Fumarate hydratase (Fumerase) FD63_08350 PF05683 Fumarase C-terminus FD63_08365 PF02253 Phospholipase A1 FD63_08375 PF00313 'Cold-shock' DNA-binding domain FD63_08390 PF00899 ThiF family FD63_08395 PF01026 TatD related DNase FD63_08410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FD63_08410 PF02770 Acyl-CoA dehydrogenase, middle domain FD63_08410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FD63_08420 PF03358 NADPH-dependent FMN reductase FD63_08425 PF03796 DnaB-like helicase C terminal domain FD63_08425 PF00772 DnaB-like helicase N terminal domain FD63_08430 PF03441 FAD binding domain of DNA photolyase FD63_08430 PF00875 DNA photolyase FD63_08435 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain FD63_08435 PF06974 Protein of unknown function (DUF1298) FD63_08440 PF00691 OmpA family FD63_08440 PF05736 OprF membrane domain FD63_08445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD63_08445 PF03466 LysR substrate binding domain FD63_08460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FD63_08460 PF00529 HlyD membrane-fusion protein of T1SS FD63_08465 PF00873 AcrB/AcrD/AcrF family FD63_08470 PF00106 short chain dehydrogenase FD63_08475 PF02321 Outer membrane efflux protein FD63_08490 PF00082 Subtilase family FD63_08495 PF01668 SmpB protein FD63_08500 PF03364 Polyketide cyclase / dehydrase and lipid transport FD63_08505 PF03658 RnfH family Ubiquitin FD63_08510 PF04355 SmpA / OmlA family FD63_08515 PF01475 Ferric uptake regulator family FD63_08520 PF02463 RecF/RecN/SMC N terminal domain FD63_08525 PF01628 HrcA protein C terminal domain FD63_08525 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding FD63_08530 PF01025 GrpE FD63_08535 PF00012 Hsp70 protein FD63_08540 PF00226 DnaJ domain FD63_08540 PF01556 DnaJ C terminal domain FD63_08540 PF00684 DnaJ central domain FD63_08545 PF08543 Phosphomethylpyrimidine kinase FD63_08550 PF02153 Prephenate dehydrogenase FD63_08550 PF01817 Chorismate mutase type II FD63_08560 PF00664 ABC transporter transmembrane region FD63_08560 PF00005 ABC transporter FD63_08565 PF01205 Uncharacterized protein family UPF0029 FD63_08575 PF08281 Sigma-70, region 4 FD63_08575 PF04542 Sigma-70 region 2 FD63_08580 PF00990 Diguanylate cyclase, GGDEF domain FD63_08580 PF03707 Bacterial signalling protein N terminal repeat FD63_08580 PF00563 EAL domain FD63_08585 PF03641 Possible lysine decarboxylase FD63_08590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FD63_08590 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD63_08595 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FD63_08595 PF02817 e3 binding domain FD63_08595 PF00364 Biotin-requiring enzyme FD63_08600 PF02779 Transketolase, pyrimidine binding domain FD63_08600 PF16870 2-oxoglutarate dehydrogenase C-terminal FD63_08600 PF00676 Dehydrogenase E1 component FD63_08600 PF16078 2-oxoglutarate dehydrogenase N-terminus FD63_08610 PF08007 Cupin superfamily protein FD63_08625 PF00206 Lyase FD63_08625 PF08328 Adenylosuccinate lyase C-terminal FD63_08635 PF10415 Fumarase C C-terminus FD63_08635 PF00206 Lyase FD63_08660 PF00005 ABC transporter FD63_08665 PF00392 Bacterial regulatory proteins, gntR family FD63_08675 PF00255 Glutathione peroxidase FD63_08680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FD63_08680 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FD63_08685 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FD63_08685 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FD63_08685 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FD63_08690 PF04102 SlyX FD63_08700 PF01757 Acyltransferase family FD63_08710 PF02574 Homocysteine S-methyltransferase FD63_08710 PF00809 Pterin binding enzyme FD63_08710 PF02310 B12 binding domain FD63_08710 PF02607 B12 binding domain FD63_08710 PF02965 Vitamin B12 dependent methionine synthase, activation domain FD63_08715 PF02574 Homocysteine S-methyltransferase FD63_08715 PF00809 Pterin binding enzyme FD63_08720 PF01209 ubiE/COQ5 methyltransferase family FD63_08725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FD63_08725 PF02770 Acyl-CoA dehydrogenase, middle domain FD63_08725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FD63_08740 PF13276 HTH-like domain FD63_08740 PF00665 Integrase core domain FD63_08740 PF13333 Integrase core domain FD63_08755 PF03377 TAL effector repeat FD63_08760 PF01527 Transposase FD63_08765 PF00665 Integrase core domain FD63_08765 PF13276 HTH-like domain FD63_08765 PF13333 Integrase core domain FD63_08775 PF01527 Transposase FD63_08810 PF07963 Prokaryotic N-terminal methylation motif FD63_08810 PF00114 Pilin (bacterial filament) FD63_08815 PF17757 UvrB interaction domain FD63_08815 PF02151 UvrB/uvrC motif FD63_08815 PF04851 Type III restriction enzyme, res subunit FD63_08815 PF00271 Helicase conserved C-terminal domain FD63_08815 PF12344 Ultra-violet resistance protein B FD63_08830 PF00873 AcrB/AcrD/AcrF family FD63_08835 PF00529 HlyD membrane-fusion protein of T1SS FD63_08835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FD63_08845 PF05088 Bacterial NAD-glutamate dehydrogenase FD63_08850 PF00665 Integrase core domain FD63_08850 PF13276 HTH-like domain FD63_08850 PF13333 Integrase core domain FD63_08855 PF01527 Transposase FD63_08880 PF02322 Cytochrome bd terminal oxidase subunit II FD63_08885 PF01654 Cytochrome bd terminal oxidase subunit I FD63_08890 PF00005 ABC transporter FD63_08890 PF00664 ABC transporter transmembrane region FD63_08895 PF00005 ABC transporter FD63_08895 PF00664 ABC transporter transmembrane region FD63_08900 PF00561 alpha/beta hydrolase fold FD63_08910 PF03918 Cytochrome C biogenesis protein FD63_08915 PF08534 Redoxin FD63_08920 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FD63_08920 PF01578 Cytochrome C assembly protein FD63_08925 PF03100 CcmE FD63_08935 PF01578 Cytochrome C assembly protein FD63_08940 PF03379 CcmB protein FD63_08945 PF00005 ABC transporter FD63_08950 PF00155 Aminotransferase class I and II FD63_08955 PF00795 Carbon-nitrogen hydrolase FD63_08975 PF01479 S4 domain FD63_08975 PF00849 RNA pseudouridylate synthase FD63_08980 PF04079 Segregation and condensation complex subunit ScpB FD63_08985 PF02616 Segregation and condensation protein ScpA FD63_08990 PF03795 YCII-related domain FD63_09000 PF00356 Bacterial regulatory proteins, lacI family FD63_09020 PF00528 Binding-protein-dependent transport system inner membrane component FD63_09025 PF00528 Binding-protein-dependent transport system inner membrane component FD63_09035 PF01081 KDPG and KHG aldolase FD63_09040 PF00920 Dehydratase family FD63_09045 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FD63_09050 PF02685 Glucokinase FD63_09055 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FD63_09055 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FD63_09060 PF00005 ABC transporter FD63_09060 PF17912 MalK OB fold domain FD63_09065 PF01571 Aminomethyltransferase folate-binding domain FD63_09070 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FD63_09075 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FD63_09080 PF02910 Fumarate reductase flavoprotein C-term FD63_09080 PF00890 FAD binding domain FD63_09085 PF13237 4Fe-4S dicluster domain FD63_09085 PF13085 2Fe-2S iron-sulfur cluster binding domain FD63_09090 PF03937 Flavinator of succinate dehydrogenase FD63_09100 PF02687 FtsX-like permease family FD63_09100 PF12704 MacB-like periplasmic core domain FD63_09105 PF00005 ABC transporter FD63_09115 PF00753 Metallo-beta-lactamase superfamily FD63_09115 PF03772 Competence protein FD63_09120 PF01618 MotA/TolQ/ExbB proton channel family FD63_09130 PF00005 ABC transporter FD63_09130 PF00664 ABC transporter transmembrane region FD63_09135 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FD63_09140 PF02348 Cytidylyltransferase FD63_09145 PF01451 Low molecular weight phosphotyrosine protein phosphatase FD63_09155 PF01541 GIY-YIG catalytic domain FD63_09155 PF02151 UvrB/uvrC motif FD63_09155 PF08459 UvrC Helix-hairpin-helix N-terminal FD63_09160 PF01066 CDP-alcohol phosphatidyltransferase FD63_09210 PF02801 Beta-ketoacyl synthase, C-terminal domain FD63_09210 PF00109 Beta-ketoacyl synthase, N-terminal domain FD63_09215 PF00550 Phosphopantetheine attachment site FD63_09230 PF01527 Transposase FD63_09240 PF01527 Transposase FD63_09245 PF13683 Integrase core domain FD63_09245 PF13276 HTH-like domain FD63_09275 PF00664 ABC transporter transmembrane region FD63_09275 PF00005 ABC transporter FD63_09295 PF00072 Response regulator receiver domain FD63_09295 PF00196 Bacterial regulatory proteins, luxR family FD63_09305 PF10150 Ribonuclease E/G family FD63_09305 PF12111 Polyribonucleotide phosphorylase C terminal FD63_09305 PF00575 S1 RNA binding domain FD63_09310 PF01479 S4 domain FD63_09310 PF00849 RNA pseudouridylate synthase FD63_09320 PF02535 ZIP Zinc transporter FD63_09330 PF01329 Pterin 4 alpha carbinolamine dehydratase FD63_09335 PF01106 NifU-like domain FD63_09345 PF00034 Cytochrome c FD63_09350 PF00034 Cytochrome c FD63_09355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FD63_09355 PF00529 HlyD membrane-fusion protein of T1SS FD63_09360 PF00873 AcrB/AcrD/AcrF family FD63_09365 PF00873 AcrB/AcrD/AcrF family FD63_09375 PF00795 Carbon-nitrogen hydrolase FD63_09380 PF04371 Porphyromonas-type peptidyl-arginine deiminase FD63_09390 PF00444 Ribosomal protein L36 FD63_09395 PF02224 Cytidylate kinase FD63_09400 PF00575 S1 RNA binding domain FD63_09405 PF00216 Bacterial DNA-binding protein FD63_09415 PF18073 Rubredoxin metal binding domain FD63_09420 PF00953 Glycosyl transferase family 4 FD63_09425 PF02719 Polysaccharide biosynthesis protein FD63_09430 PF00483 Nucleotidyl transferase FD63_09435 PF00108 Thiolase, N-terminal domain FD63_09435 PF02803 Thiolase, C-terminal domain FD63_09440 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FD63_09440 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FD63_09440 PF00378 Enoyl-CoA hydratase/isomerase FD63_09450 PF00334 Nucleoside diphosphate kinase FD63_09455 PF04055 Radical SAM superfamily FD63_09465 PF13464 Domain of unknown function (DUF4115) FD63_09475 PF13360 PQQ-like domain FD63_09475 PF01011 PQQ enzyme repeat FD63_09480 PF01926 50S ribosome-binding GTPase FD63_09480 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FD63_09485 PF12804 MobA-like NTP transferase domain FD63_09490 PF00994 Probable molybdopterin binding domain FD63_09490 PF03453 MoeA N-terminal region (domain I and II) FD63_09490 PF03454 MoeA C-terminal region (domain IV) FD63_09495 PF00899 ThiF family FD63_09500 PF00999 Sodium/hydrogen exchanger family FD63_09500 PF02254 TrkA-N domain FD63_09515 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FD63_09515 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FD63_09520 PF00478 IMP dehydrogenase / GMP reductase domain FD63_09520 PF00571 CBS domain FD63_09525 PF02540 NAD synthase FD63_09525 PF00958 GMP synthase C terminal domain FD63_09525 PF00117 Glutamine amidotransferase class-I FD63_09530 PF16338 Domain of unknown function (DUF4968) FD63_09530 PF17137 Domain of unknown function (DUF5110) FD63_09530 PF01055 Glycosyl hydrolases family 31 FD63_09535 PF06745 KaiC FD63_09540 PF13188 PAS domain FD63_09540 PF00072 Response regulator receiver domain FD63_09540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_09540 PF08448 PAS fold FD63_09540 PF00512 His Kinase A (phospho-acceptor) domain FD63_09545 PF01566 Natural resistance-associated macrophage protein FD63_09550 PF02742 Iron dependent repressor, metal binding and dimerisation domain FD63_09550 PF01325 Iron dependent repressor, N-terminal DNA binding domain FD63_09555 PF14437 MafB19-like deaminase FD63_09560 PF00929 Exonuclease FD63_09565 PF00924 Mechanosensitive ion channel FD63_09565 PF05552 Conserved TM helix FD63_09570 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FD63_09570 PF00391 PEP-utilising enzyme, mobile domain FD63_09570 PF02896 PEP-utilising enzyme, TIM barrel domain FD63_09575 PF03618 Kinase/pyrophosphorylase FD63_09595 PF01066 CDP-alcohol phosphatidyltransferase FD63_09605 PF00561 alpha/beta hydrolase fold FD63_09625 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FD63_09625 PF01266 FAD dependent oxidoreductase FD63_09635 PF00072 Response regulator receiver domain FD63_09635 PF13426 PAS domain FD63_09635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_09640 PF16921 Tex protein YqgF-like domain FD63_09640 PF00575 S1 RNA binding domain FD63_09640 PF09371 Tex-like protein N-terminal domain FD63_09640 PF17674 HHH domain FD63_09645 PF09308 LuxQ, periplasmic FD63_09645 PF00512 His Kinase A (phospho-acceptor) domain FD63_09645 PF00072 Response regulator receiver domain FD63_09645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_09680 PF00873 AcrB/AcrD/AcrF family FD63_09715 PF01527 Transposase FD63_09720 PF13276 HTH-like domain FD63_09720 PF13333 Integrase core domain FD63_09720 PF00665 Integrase core domain FD63_09730 PF01070 FMN-dependent dehydrogenase FD63_09735 PF00155 Aminotransferase class I and II FD63_09755 PF00975 Thioesterase domain FD63_09755 PF00501 AMP-binding enzyme FD63_09755 PF13193 AMP-binding enzyme C-terminal domain FD63_09755 PF00668 Condensation domain FD63_09755 PF00550 Phosphopantetheine attachment site FD63_09760 PF00501 AMP-binding enzyme FD63_09760 PF13193 AMP-binding enzyme C-terminal domain FD63_09760 PF00668 Condensation domain FD63_09760 PF00975 Thioesterase domain FD63_09760 PF00550 Phosphopantetheine attachment site FD63_09785 PF00550 Phosphopantetheine attachment site FD63_09785 PF00668 Condensation domain FD63_09785 PF00975 Thioesterase domain FD63_09785 PF13193 AMP-binding enzyme C-terminal domain FD63_09785 PF00501 AMP-binding enzyme FD63_09790 PF00195 Chalcone and stilbene synthases, N-terminal domain FD63_09790 PF02797 Chalcone and stilbene synthases, C-terminal domain FD63_09800 PF00378 Enoyl-CoA hydratase/isomerase FD63_09805 PF00155 Aminotransferase class I and II FD63_09810 PF00378 Enoyl-CoA hydratase/isomerase FD63_09815 PF00005 ABC transporter FD63_09815 PF00664 ABC transporter transmembrane region FD63_09820 PF03621 MbtH-like protein FD63_09825 PF12706 Beta-lactamase superfamily domain FD63_09825 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain FD63_09830 PF12706 Beta-lactamase superfamily domain FD63_09830 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain FD63_09850 PF01527 Transposase FD63_09855 PF00665 Integrase core domain FD63_09855 PF13276 HTH-like domain FD63_09855 PF13333 Integrase core domain FD63_09865 PF13361 UvrD-like helicase C-terminal domain FD63_09865 PF12705 PD-(D/E)XK nuclease superfamily FD63_09865 PF00580 UvrD/REP helicase N-terminal domain FD63_09895 PF01368 DHH family FD63_09895 PF02272 DHHA1 domain FD63_09895 PF17768 RecJ OB domain FD63_09905 PF01272 Transcription elongation factor, GreA/GreB, C-term FD63_09905 PF03449 Transcription elongation factor, N-terminal FD63_09910 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FD63_09910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FD63_09910 PF02142 MGS-like domain FD63_09920 PF00117 Glutamine amidotransferase class-I FD63_09920 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FD63_09925 PF05173 Dihydrodipicolinate reductase, C-terminus FD63_09925 PF01113 Dihydrodipicolinate reductase, N-terminus FD63_09930 PF03473 MOSC domain FD63_09930 PF03475 3-alpha domain FD63_09935 PF00155 Aminotransferase class I and II FD63_09940 PF01527 Transposase FD63_09945 PF13276 HTH-like domain FD63_09945 PF00665 Integrase core domain FD63_09945 PF13333 Integrase core domain FD63_09955 PF00534 Glycosyl transferases group 1 FD63_09955 PF13579 Glycosyl transferase 4-like domain FD63_09960 PF00534 Glycosyl transferases group 1 FD63_09960 PF13439 Glycosyltransferase Family 4 FD63_09995 PF00535 Glycosyl transferase family 2 FD63_10000 PF01943 Polysaccharide biosynthesis protein FD63_10005 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FD63_10025 PF05523 WxcM-like, C-terminal FD63_10030 PF01292 Prokaryotic cytochrome b561 FD63_10040 PF00034 Cytochrome c FD63_10050 PF08281 Sigma-70, region 4 FD63_10050 PF04542 Sigma-70 region 2 FD63_10060 PF00082 Subtilase family FD63_10065 PF01578 Cytochrome C assembly protein FD63_10075 PF03100 CcmE FD63_10080 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FD63_10080 PF01578 Cytochrome C assembly protein FD63_10085 PF08534 Redoxin FD63_10090 PF03918 Cytochrome C biogenesis protein FD63_10105 PF00654 Voltage gated chloride channel FD63_10110 PF00004 ATPase family associated with various cellular activities (AAA) FD63_10110 PF16193 AAA C-terminal domain FD63_10110 PF12002 MgsA AAA+ ATPase C terminal FD63_10120 PF03548 Outer membrane lipoprotein carrier protein LolA FD63_10130 PF01580 FtsK/SpoIIIE family FD63_10130 PF09397 Ftsk gamma domain FD63_10130 PF17854 FtsK alpha domain FD63_10130 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FD63_10135 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD63_10145 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FD63_10150 PF01176 Translation initiation factor 1A / IF-1 FD63_10155 PF10431 C-terminal, D2-small domain, of ClpB protein FD63_10155 PF02861 Clp amino terminal domain, pathogenicity island component FD63_10155 PF17871 AAA lid domain FD63_10155 PF07724 AAA domain (Cdc48 subfamily) FD63_10155 PF00004 ATPase family associated with various cellular activities (AAA) FD63_10160 PF02617 ATP-dependent Clp protease adaptor protein ClpS FD63_10170 PF00293 NUDIX domain FD63_10180 PF04356 Protein of unknown function (DUF489) FD63_10185 PF12729 Four helix bundle sensory module for signal transduction FD63_10185 PF00672 HAMP domain FD63_10185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_10195 PF00005 ABC transporter FD63_10205 PF03707 Bacterial signalling protein N terminal repeat FD63_10205 PF00563 EAL domain FD63_10205 PF00990 Diguanylate cyclase, GGDEF domain FD63_10210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_10210 PF07730 Histidine kinase FD63_10215 PF00990 Diguanylate cyclase, GGDEF domain FD63_10215 PF03707 Bacterial signalling protein N terminal repeat FD63_10215 PF00563 EAL domain FD63_10220 PF00512 His Kinase A (phospho-acceptor) domain FD63_10220 PF13188 PAS domain FD63_10220 PF08448 PAS fold FD63_10220 PF00072 Response regulator receiver domain FD63_10220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_10240 PF00072 Response regulator receiver domain FD63_10240 PF01584 CheW-like domain FD63_10250 PF00460 Flagella basal body rod protein FD63_10250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FD63_10255 PF03963 Flagellar hook capping protein - N-terminal region FD63_10255 PF13860 FlgD Ig-like domain FD63_10255 PF13861 FlgD Tudor-like domain FD63_10260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FD63_10260 PF00460 Flagella basal body rod protein FD63_10260 PF07559 Flagellar basal body protein FlaE FD63_10265 PF00460 Flagella basal body rod protein FD63_10265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FD63_10270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FD63_10270 PF00460 Flagella basal body rod protein FD63_10275 PF02107 Flagellar L-ring protein FD63_10280 PF02119 Flagellar P-ring protein FD63_10285 PF10135 Rod binding protein FD63_10285 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FD63_10290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FD63_10290 PF00460 Flagella basal body rod protein FD63_10290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FD63_10290 PF00460 Flagella basal body rod protein FD63_10295 PF00669 Bacterial flagellin N-terminal helical region FD63_10300 PF00700 Bacterial flagellin C-terminal helical region FD63_10300 PF00669 Bacterial flagellin N-terminal helical region FD63_10305 PF02465 Flagellar hook-associated protein 2 N-terminus FD63_10305 PF07195 Flagellar hook-associated protein 2 C-terminus FD63_10305 PF07196 Flagellin hook IN motif FD63_10310 PF02561 Flagellar protein FliS FD63_10325 PF00072 Response regulator receiver domain FD63_10325 PF00196 Bacterial regulatory proteins, luxR family FD63_10330 PF04963 Sigma-54 factor, core binding domain FD63_10330 PF04552 Sigma-54, DNA binding domain FD63_10330 PF00309 Sigma-54 factor, Activator interacting domain (AID) FD63_10335 PF01339 CheB methylesterase FD63_10335 PF00072 Response regulator receiver domain FD63_10340 PF00158 Sigma-54 interaction domain FD63_10340 PF00072 Response regulator receiver domain FD63_10340 PF02954 Bacterial regulatory protein, Fis family FD63_10345 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FD63_10355 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FD63_10355 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FD63_10390 PF00534 Glycosyl transferases group 1 FD63_10390 PF00535 Glycosyl transferase family 2 FD63_10395 PF02049 Flagellar hook-basal body complex protein FliE FD63_10400 PF08345 Flagellar M-ring protein C-terminal FD63_10400 PF01514 Secretory protein of YscJ/FliF family FD63_10405 PF14842 FliG N-terminal domain FD63_10405 PF14841 FliG middle domain FD63_10405 PF01706 FliG C-terminal domain FD63_10415 PF18269 T3SS EscN ATPase C-terminal domain FD63_10415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FD63_10435 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FD63_10435 PF02154 Flagellar motor switch protein FliM FD63_10440 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FD63_10445 PF04347 Flagellar biosynthesis protein, FliO FD63_10450 PF00813 FliP family FD63_10455 PF01313 Bacterial export proteins, family 3 FD63_10460 PF01311 Bacterial export proteins, family 1 FD63_10465 PF13188 PAS domain FD63_10465 PF03707 Bacterial signalling protein N terminal repeat FD63_10465 PF00990 Diguanylate cyclase, GGDEF domain FD63_10465 PF00563 EAL domain FD63_10470 PF00990 Diguanylate cyclase, GGDEF domain FD63_10470 PF00072 Response regulator receiver domain FD63_10475 PF01312 FlhB HrpN YscU SpaS Family FD63_10480 PF00771 FHIPEP family FD63_10485 PF00448 SRP54-type protein, GTPase domain FD63_10490 PF10609 NUBPL iron-transfer P-loop NTPase FD63_10495 PF04539 Sigma-70 region 3 FD63_10495 PF04542 Sigma-70 region 2 FD63_10495 PF04545 Sigma-70, region 4 FD63_10500 PF00072 Response regulator receiver domain FD63_10505 PF04344 Chemotaxis phosphatase, CheZ FD63_10510 PF09078 CheY binding FD63_10510 PF02895 Signal transducing histidine kinase, homodimeric domain FD63_10510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_10510 PF01627 Hpt domain FD63_10510 PF01584 CheW-like domain FD63_10515 PF01618 MotA/TolQ/ExbB proton channel family FD63_10520 PF13677 Membrane MotB of proton-channel complex MotA/MotB FD63_10520 PF00691 OmpA family FD63_10525 PF13614 AAA domain FD63_10530 PF01584 CheW-like domain FD63_10540 PF00072 Response regulator receiver domain FD63_10545 PF01584 CheW-like domain FD63_10545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_10545 PF02895 Signal transducing histidine kinase, homodimeric domain FD63_10545 PF01627 Hpt domain FD63_10545 PF09078 CheY binding FD63_10555 PF00672 HAMP domain FD63_10555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_10555 PF02203 Tar ligand binding domain homologue FD63_10560 PF02203 Tar ligand binding domain homologue FD63_10560 PF00672 HAMP domain FD63_10560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_10565 PF00672 HAMP domain FD63_10565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_10565 PF02203 Tar ligand binding domain homologue FD63_10580 PF02203 Tar ligand binding domain homologue FD63_10580 PF00672 HAMP domain FD63_10580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_10590 PF00672 HAMP domain FD63_10590 PF02203 Tar ligand binding domain homologue FD63_10590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_10595 PF02203 Tar ligand binding domain homologue FD63_10595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_10595 PF00672 HAMP domain FD63_10600 PF00672 HAMP domain FD63_10600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_10600 PF02203 Tar ligand binding domain homologue FD63_10610 PF02203 Tar ligand binding domain homologue FD63_10610 PF00672 HAMP domain FD63_10610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_10615 PF07317 Flagellar regulator YcgR FD63_10615 PF07238 PilZ domain FD63_10620 PF01584 CheW-like domain FD63_10630 PF02203 Tar ligand binding domain homologue FD63_10630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_10630 PF00672 HAMP domain FD63_10640 PF00672 HAMP domain FD63_10640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_10640 PF02203 Tar ligand binding domain homologue FD63_10645 PF01739 CheR methyltransferase, SAM binding domain FD63_10645 PF03705 CheR methyltransferase, all-alpha domain FD63_10650 PF03975 CheD chemotactic sensory transduction FD63_10655 PF01339 CheB methylesterase FD63_10655 PF00072 Response regulator receiver domain FD63_10660 PF00563 EAL domain FD63_10660 PF00990 Diguanylate cyclase, GGDEF domain FD63_10660 PF03707 Bacterial signalling protein N terminal repeat FD63_10680 PF00330 Aconitase family (aconitate hydratase) FD63_10680 PF11791 Aconitate B N-terminal domain FD63_10680 PF06434 Aconitate hydratase 2 N-terminus FD63_10695 PF00694 Aconitase C-terminal domain FD63_10695 PF00330 Aconitase family (aconitate hydratase) FD63_10705 PF00501 AMP-binding enzyme FD63_10705 PF13193 AMP-binding enzyme C-terminal domain FD63_10715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_10715 PF00072 Response regulator receiver domain FD63_10715 PF00512 His Kinase A (phospho-acceptor) domain FD63_10715 PF01627 Hpt domain FD63_10720 PF00072 Response regulator receiver domain FD63_10725 PF01336 OB-fold nucleic acid binding domain FD63_10725 PF00152 tRNA synthetases class II (D, K and N) FD63_10730 PF00472 RF-1 domain FD63_10730 PF03462 PCRF domain FD63_10745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD63_10745 PF03466 LysR substrate binding domain FD63_10750 PF01081 KDPG and KHG aldolase FD63_10755 PF13378 Enolase C-terminal domain-like FD63_10755 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FD63_10760 PF08450 SMP-30/Gluconolactonase/LRE-like region FD63_10765 PF05035 2-keto-3-deoxy-galactonokinase FD63_10770 PF00037 4Fe-4S binding domain FD63_10770 PF11953 Domain of unknown function (DUF3470) FD63_10780 PF00701 Dihydrodipicolinate synthetase family FD63_10790 PF00578 AhpC/TSA family FD63_10795 PF02562 PhoH-like protein FD63_10795 PF13638 PIN domain FD63_10810 PF03377 TAL effector repeat FD63_10830 PF08543 Phosphomethylpyrimidine kinase FD63_10830 PF02581 Thiamine monophosphate synthase FD63_10855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD63_10855 PF03466 LysR substrate binding domain FD63_10860 PF17954 Quercetinase C-terminal cupin domain FD63_10860 PF02678 Pirin FD63_10865 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FD63_10865 PF00128 Alpha amylase, catalytic domain FD63_10885 PF02599 Global regulator protein family FD63_10890 PF02272 DHHA1 domain FD63_10890 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FD63_10890 PF01411 tRNA synthetases class II (A) FD63_10895 PF02631 RecX family FD63_10900 PF00154 recA bacterial DNA recombination protein FD63_10905 PF01726 LexA DNA binding domain FD63_10905 PF00717 Peptidase S24-like FD63_10910 PF03109 ABC1 family FD63_10915 PF02464 Competence-damaged protein FD63_10920 PF13167 GTP-binding GTPase N-terminal FD63_10920 PF16360 GTP-binding GTPase Middle Region FD63_10920 PF01926 50S ribosome-binding GTPase FD63_10925 PF17209 Hfq protein FD63_10935 PF00809 Pterin binding enzyme FD63_10940 PF01434 Peptidase family M41 FD63_10940 PF00004 ATPase family associated with various cellular activities (AAA) FD63_10940 PF17862 AAA+ lid domain FD63_10940 PF06480 FtsH Extracellular FD63_10945 PF01728 FtsJ-like methyltransferase FD63_10950 PF01985 CRS1 / YhbY (CRM) domain FD63_10960 PF01551 Peptidase family M23 FD63_10960 PF01476 LysM domain FD63_10965 PF09335 SNARE associated Golgi protein FD63_10975 PF01975 Survival protein SurE FD63_10980 PF01713 Smr domain FD63_10985 PF01142 tRNA pseudouridine synthase D (TruD) FD63_10990 PF02542 YgbB family FD63_10995 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FD63_11000 PF04977 Septum formation initiator FD63_11005 PF03952 Enolase, N-terminal domain FD63_11005 PF00113 Enolase, C-terminal TIM barrel domain FD63_11010 PF00793 DAHP synthetase I family FD63_11020 PF06418 CTP synthase N-terminus FD63_11020 PF00117 Glutamine amidotransferase class-I FD63_11030 PF00204 DNA gyrase B FD63_11030 PF00986 DNA gyrase B subunit, carboxyl terminus FD63_11030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_11030 PF01751 Toprim domain FD63_11045 PF01384 Phosphate transporter family FD63_11055 PF03471 Transporter associated domain FD63_11055 PF01595 Cyclin M transmembrane N-terminal domain FD63_11055 PF00571 CBS domain FD63_11070 PF00296 Luciferase-like monooxygenase FD63_11090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FD63_11100 PF00990 Diguanylate cyclase, GGDEF domain FD63_11100 PF03707 Bacterial signalling protein N terminal repeat FD63_11100 PF00563 EAL domain FD63_11110 PF01645 Conserved region in glutamate synthase FD63_11115 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FD63_11115 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FD63_11115 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FD63_11125 PF00356 Bacterial regulatory proteins, lacI family FD63_11130 PF00391 PEP-utilising enzyme, mobile domain FD63_11130 PF00381 PTS HPr component phosphorylation site FD63_11130 PF02896 PEP-utilising enzyme, TIM barrel domain FD63_11130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FD63_11130 PF05524 PEP-utilising enzyme, N-terminal FD63_11135 PF00294 pfkB family carbohydrate kinase FD63_11140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FD63_11150 PF00486 Transcriptional regulatory protein, C terminal FD63_11150 PF00072 Response regulator receiver domain FD63_11155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_11155 PF00512 His Kinase A (phospho-acceptor) domain FD63_11175 PF00005 ABC transporter FD63_11175 PF02687 FtsX-like permease family FD63_11175 PF12704 MacB-like periplasmic core domain FD63_11210 PF13276 HTH-like domain FD63_11210 PF00665 Integrase core domain FD63_11210 PF13333 Integrase core domain FD63_11225 PF01527 Transposase FD63_11250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD63_11250 PF03466 LysR substrate binding domain FD63_11255 PF02403 Seryl-tRNA synthetase N-terminal domain FD63_11255 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FD63_11260 PF03544 Gram-negative bacterial TonB protein C-terminal FD63_11270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FD63_11280 PF01842 ACT domain FD63_11280 PF00800 Prephenate dehydratase FD63_11280 PF01817 Chorismate mutase type II FD63_11285 PF00266 Aminotransferase class-V FD63_11290 PF00174 Oxidoreductase molybdopterin binding domain FD63_11295 PF01794 Ferric reductase like transmembrane component FD63_11330 PF00106 short chain dehydrogenase FD63_11345 PF07969 Amidohydrolase family FD63_11350 PF00221 Aromatic amino acid lyase FD63_11360 PF17391 Urocanase N-terminal domain FD63_11360 PF17392 Urocanase C-terminal domain FD63_11360 PF01175 Urocanase Rossmann-like domain FD63_11375 PF00440 Bacterial regulatory proteins, tetR family FD63_11390 PF00521 DNA gyrase/topoisomerase IV, subunit A FD63_11390 PF03989 DNA gyrase C-terminal domain, beta-propeller FD63_11395 PF01008 Initiation factor 2 subunit family FD63_11405 PF00152 tRNA synthetases class II (D, K and N) FD63_11410 PF12826 Helix-hairpin-helix motif FD63_11410 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FD63_11410 PF03120 NAD-dependent DNA ligase OB-fold domain FD63_11410 PF01653 NAD-dependent DNA ligase adenylation domain FD63_11410 PF00533 BRCA1 C Terminus (BRCT) domain FD63_11415 PF00155 Aminotransferase class I and II FD63_11420 PF04354 ZipA, C-terminal FtsZ-binding domain FD63_11425 PF02463 RecF/RecN/SMC N terminal domain FD63_11430 PF01281 Ribosomal protein L9, N-terminal domain FD63_11430 PF03948 Ribosomal protein L9, C-terminal domain FD63_11435 PF01084 Ribosomal protein S18 FD63_11440 PF01250 Ribosomal protein S6 FD63_11450 PF01521 Iron-sulphur cluster biosynthesis FD63_11455 PF01336 OB-fold nucleic acid binding domain FD63_11455 PF00152 tRNA synthetases class II (D, K and N) FD63_11475 PF00072 Response regulator receiver domain FD63_11475 PF00196 Bacterial regulatory proteins, luxR family FD63_11520 PF00484 Carbonic anhydrase FD63_11525 PF06052 3-hydroxyanthranilic acid dioxygenase FD63_11535 PF00266 Aminotransferase class-V FD63_11540 PF01494 FAD binding domain FD63_11545 PF00929 Exonuclease FD63_11545 PF08411 Exonuclease C-terminal FD63_11570 PF01513 ATP-NAD kinase FD63_11575 PF05598 Transposase domain (DUF772) FD63_11575 PF01609 Transposase DDE domain FD63_11580 PF03377 TAL effector repeat FD63_11585 PF01527 Transposase FD63_11590 PF00665 Integrase core domain FD63_11590 PF13333 Integrase core domain FD63_11590 PF13276 HTH-like domain FD63_11600 PF07963 Prokaryotic N-terminal methylation motif FD63_11600 PF00114 Pilin (bacterial filament) FD63_11605 PF05567 Neisseria PilC beta-propeller domain FD63_11630 PF07694 5TMR of 5TMR-LYT FD63_11630 PF06580 Histidine kinase FD63_11635 PF03641 Possible lysine decarboxylase FD63_11635 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FD63_11635 PF11892 Domain of unknown function (DUF3412) FD63_11640 PF00593 TonB dependent receptor FD63_11645 PF01914 MarC family integral membrane protein FD63_11650 PF00106 short chain dehydrogenase FD63_11655 PF00462 Glutaredoxin FD63_11660 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FD63_11660 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FD63_11665 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FD63_11665 PF02222 ATP-grasp domain FD63_11670 PF00731 AIR carboxylase FD63_11680 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FD63_11680 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FD63_11695 PF04386 Stringent starvation protein B FD63_11700 PF00043 Glutathione S-transferase, C-terminal domain FD63_11700 PF02798 Glutathione S-transferase, N-terminal domain FD63_11705 PF02167 Cytochrome C1 family FD63_11715 PF00033 Cytochrome b/b6/petB FD63_11715 PF00032 Cytochrome b(C-terminal)/b6/petD FD63_11720 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FD63_11720 PF00355 Rieske [2Fe-2S] domain FD63_11725 PF01464 Transglycosylase SLT domain FD63_11725 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FD63_11730 PF02798 Glutathione S-transferase, N-terminal domain FD63_11730 PF00043 Glutathione S-transferase, C-terminal domain FD63_11735 PF00919 Uncharacterized protein family UPF0004 FD63_11735 PF04055 Radical SAM superfamily FD63_11735 PF01938 TRAM domain FD63_11740 PF02562 PhoH-like protein FD63_11745 PF02130 Uncharacterized protein family UPF0054 FD63_11755 PF03471 Transporter associated domain FD63_11755 PF00571 CBS domain FD63_11765 PF01544 CorA-like Mg2+ transporter protein FD63_11770 PF00171 Aldehyde dehydrogenase family FD63_11780 PF00528 Binding-protein-dependent transport system inner membrane component FD63_11785 PF00528 Binding-protein-dependent transport system inner membrane component FD63_11790 PF08402 TOBE domain FD63_11790 PF00005 ABC transporter FD63_11795 PF02321 Outer membrane efflux protein FD63_11800 PF07690 Major Facilitator Superfamily FD63_11805 PF13533 Biotin-lipoyl like FD63_11815 PF13416 Bacterial extracellular solute-binding protein FD63_11820 PF00202 Aminotransferase class-III FD63_11825 PF00120 Glutamine synthetase, catalytic domain FD63_11830 PF07722 Peptidase C26 FD63_11835 PF00120 Glutamine synthetase, catalytic domain FD63_11840 PF01266 FAD dependent oxidoreductase FD63_11845 PF00990 Diguanylate cyclase, GGDEF domain FD63_11845 PF00072 Response regulator receiver domain FD63_11850 PF00083 Sugar (and other) transporter FD63_11850 PF07690 Major Facilitator Superfamily FD63_11855 PF00818 Ice nucleation protein repeat FD63_11865 PF00384 Molybdopterin oxidoreductase FD63_11870 PF02634 FdhD/NarQ family FD63_11875 PF07690 Major Facilitator Superfamily FD63_11895 PF00171 Aldehyde dehydrogenase family FD63_11900 PF07883 Cupin domain FD63_11900 PF01381 Helix-turn-helix FD63_11905 PF00202 Aminotransferase class-III FD63_11910 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FD63_11910 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FD63_11915 PF00171 Aldehyde dehydrogenase family FD63_11930 PF04286 Protein of unknown function (DUF445) FD63_11935 PF00672 HAMP domain FD63_11935 PF01627 Hpt domain FD63_11935 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FD63_11935 PF00072 Response regulator receiver domain FD63_11935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_11935 PF00512 His Kinase A (phospho-acceptor) domain FD63_11940 PF00072 Response regulator receiver domain FD63_11945 PF01170 Putative RNA methylase family UPF0020 FD63_11945 PF02926 THUMP domain FD63_11945 PF10672 S-adenosylmethionine-dependent methyltransferase FD63_11980 PF00581 Rhodanese-like domain FD63_11985 PF00293 NUDIX domain FD63_11990 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FD63_11990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FD63_11995 PF00378 Enoyl-CoA hydratase/isomerase FD63_12005 PF10576 Iron-sulfur binding domain of endonuclease III FD63_12005 PF00633 Helix-hairpin-helix motif FD63_12005 PF00730 HhH-GPD superfamily base excision DNA repair protein FD63_12015 PF00484 Carbonic anhydrase FD63_12025 PF07396 Phosphate-selective porin O and P FD63_12030 PF12849 PBP superfamily domain FD63_12035 PF12849 PBP superfamily domain FD63_12040 PF00528 Binding-protein-dependent transport system inner membrane component FD63_12045 PF00528 Binding-protein-dependent transport system inner membrane component FD63_12050 PF00005 ABC transporter FD63_12055 PF01895 PhoU domain FD63_12065 PF05114 Protein of unknown function (DUF692) FD63_12075 PF00929 Exonuclease FD63_12095 PF08032 RNA 2'-O ribose methyltransferase substrate binding FD63_12095 PF00588 SpoU rRNA Methylase family FD63_12105 PF08206 Ribonuclease B OB domain FD63_12105 PF00575 S1 RNA binding domain FD63_12105 PF08461 Ribonuclease R winged-helix domain FD63_12105 PF00773 RNB domain FD63_12105 PF17876 Cold shock domain FD63_12115 PF06903 VirK protein FD63_12140 PF07690 Major Facilitator Superfamily FD63_12145 PF00529 HlyD membrane-fusion protein of T1SS FD63_12145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FD63_12150 PF02321 Outer membrane efflux protein FD63_12165 PF03989 DNA gyrase C-terminal domain, beta-propeller FD63_12165 PF00521 DNA gyrase/topoisomerase IV, subunit A FD63_12170 PF00210 Ferritin-like domain FD63_12175 PF01804 Penicillin amidase FD63_12185 PF00733 Asparagine synthase FD63_12185 PF13537 Glutamine amidotransferase domain FD63_12195 PF07687 Peptidase dimerisation domain FD63_12195 PF01546 Peptidase family M20/M25/M40 FD63_12200 PF03960 ArsC family FD63_12205 PF00132 Bacterial transferase hexapeptide (six repeats) FD63_12205 PF14602 Hexapeptide repeat of succinyl-transferase FD63_12205 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FD63_12210 PF01909 Nucleotidyltransferase domain FD63_12210 PF08335 GlnD PII-uridylyltransferase FD63_12210 PF01966 HD domain FD63_12215 PF00557 Metallopeptidase family M24 FD63_12250 PF00318 Ribosomal protein S2 FD63_12255 PF00889 Elongation factor TS FD63_12260 PF00990 Diguanylate cyclase, GGDEF domain FD63_12265 PF00696 Amino acid kinase family FD63_12270 PF01765 Ribosome recycling factor FD63_12275 PF01255 Putative undecaprenyl diphosphate synthase FD63_12285 PF13288 DXP reductoisomerase C-terminal domain FD63_12285 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FD63_12285 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FD63_12290 PF17820 PDZ domain FD63_12290 PF02163 Peptidase family M50 FD63_12295 PF01103 Surface antigen FD63_12295 PF07244 Surface antigen variable number repeat FD63_12300 PF00132 Bacterial transferase hexapeptide (six repeats) FD63_12300 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FD63_12305 PF07977 FabA-like domain FD63_12310 PF00132 Bacterial transferase hexapeptide (six repeats) FD63_12310 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FD63_12315 PF02684 Lipid-A-disaccharide synthetase FD63_12320 PF01351 Ribonuclease HII FD63_12325 PF02811 PHP domain FD63_12325 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FD63_12325 PF14579 Helix-hairpin-helix motif FD63_12325 PF07733 Bacterial DNA polymerase III alpha NTPase domain FD63_12325 PF01336 OB-fold nucleic acid binding domain FD63_12330 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FD63_12410 PF03377 TAL effector repeat FD63_12415 PF13333 Integrase core domain FD63_12415 PF00665 Integrase core domain FD63_12415 PF13276 HTH-like domain FD63_12420 PF01527 Transposase FD63_12425 PF03377 TAL effector repeat FD63_12430 PF00664 ABC transporter transmembrane region FD63_12430 PF00005 ABC transporter FD63_12445 PF00144 Beta-lactamase FD63_12450 PF03737 Aldolase/RraA FD63_12460 PF03812 2-keto-3-deoxygluconate permease FD63_12470 PF00990 Diguanylate cyclase, GGDEF domain FD63_12470 PF00072 Response regulator receiver domain FD63_12475 PF01479 S4 domain FD63_12475 PF00849 RNA pseudouridylate synthase FD63_12480 PF00270 DEAD/DEAH box helicase FD63_12480 PF00271 Helicase conserved C-terminal domain FD63_12480 PF03880 DbpA RNA binding domain FD63_12500 PF01494 FAD binding domain FD63_12525 PF06029 AlkA N-terminal domain FD63_12525 PF12833 Helix-turn-helix domain FD63_12525 PF02805 Metal binding domain of Ada FD63_12525 PF00730 HhH-GPD superfamily base excision DNA repair protein FD63_12530 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FD63_12530 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FD63_12540 PF00654 Voltage gated chloride channel FD63_12545 PF00107 Zinc-binding dehydrogenase FD63_12545 PF08240 Alcohol dehydrogenase GroES-like domain FD63_12560 PF07715 TonB-dependent Receptor Plug Domain FD63_12560 PF00593 TonB dependent receptor FD63_12580 PF10518 TAT (twin-arginine translocation) pathway signal sequence FD63_12580 PF01799 [2Fe-2S] binding domain FD63_12580 PF00111 2Fe-2S iron-sulfur cluster binding domain FD63_12585 PF00941 FAD binding domain in molybdopterin dehydrogenase FD63_12585 PF03450 CO dehydrogenase flavoprotein C-terminal domain FD63_12590 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FD63_12590 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FD63_12595 PF12804 MobA-like NTP transferase domain FD63_12605 PF00561 alpha/beta hydrolase fold FD63_12615 PF01483 Proprotein convertase P-domain FD63_12615 PF00082 Subtilase family FD63_12630 PF07690 Major Facilitator Superfamily FD63_12635 PF01475 Ferric uptake regulator family FD63_12640 PF00749 tRNA synthetases class I (E and Q), catalytic domain FD63_12670 PF00672 HAMP domain FD63_12670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_12670 PF00512 His Kinase A (phospho-acceptor) domain FD63_12680 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FD63_12700 PF17757 UvrB interaction domain FD63_12700 PF00271 Helicase conserved C-terminal domain FD63_12700 PF00270 DEAD/DEAH box helicase FD63_12700 PF02559 CarD-like/TRCF domain FD63_12700 PF03461 TRCF domain FD63_12710 PF02895 Signal transducing histidine kinase, homodimeric domain FD63_12710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_12710 PF01627 Hpt domain FD63_12710 PF01584 CheW-like domain FD63_12720 PF00672 HAMP domain FD63_12720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_12720 PF02203 Tar ligand binding domain homologue FD63_12725 PF00672 HAMP domain FD63_12725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_12725 PF12729 Four helix bundle sensory module for signal transduction FD63_12730 PF01584 CheW-like domain FD63_12735 PF03707 Bacterial signalling protein N terminal repeat FD63_12735 PF00563 EAL domain FD63_12735 PF00990 Diguanylate cyclase, GGDEF domain FD63_12740 PF03705 CheR methyltransferase, all-alpha domain FD63_12740 PF01739 CheR methyltransferase, SAM binding domain FD63_12745 PF00072 Response regulator receiver domain FD63_12745 PF01339 CheB methylesterase FD63_12760 PF02311 AraC-like ligand binding domain FD63_12760 PF12833 Helix-turn-helix domain FD63_12770 PF07944 Beta-L-arabinofuranosidase, GH127 FD63_12780 PF00300 Histidine phosphatase superfamily (branch 1) FD63_12785 PF04493 Endonuclease V FD63_12795 PF02678 Pirin FD63_12795 PF05726 Pirin C-terminal cupin domain FD63_12800 PF02554 Carbon starvation protein CstA FD63_12800 PF13722 5TM C-terminal transporter carbon starvation CstA FD63_12805 PF04328 Selenoprotein, putative FD63_12815 PF13419 Haloacid dehalogenase-like hydrolase FD63_12835 PF00326 Prolyl oligopeptidase family FD63_12835 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region FD63_12835 PF07676 WD40-like Beta Propeller Repeat FD63_12840 PF03169 OPT oligopeptide transporter protein FD63_12845 PF00854 POT family FD63_12865 PF00436 Single-strand binding protein family FD63_12870 PF00348 Polyprenyl synthetase FD63_12880 PF08245 Mur ligase middle domain FD63_12895 PF01842 ACT domain FD63_12895 PF00696 Amino acid kinase family FD63_12900 PF02567 Phenazine biosynthesis-like protein FD63_12910 PF02566 OsmC-like protein FD63_12925 PF01551 Peptidase family M23 FD63_12925 PF01476 LysM domain FD63_12925 PF08525 Opacity-associated protein A N-terminal motif FD63_12940 PF01965 DJ-1/PfpI family FD63_12955 PF01458 Uncharacterized protein family (UPF0051) FD63_12960 PF00005 ABC transporter FD63_12965 PF01458 Uncharacterized protein family (UPF0051) FD63_12970 PF00266 Aminotransferase class-V FD63_12980 PF00355 Rieske [2Fe-2S] domain FD63_12985 PF07715 TonB-dependent Receptor Plug Domain FD63_12985 PF00593 TonB dependent receptor FD63_12990 PF13640 2OG-Fe(II) oxygenase superfamily FD63_12990 PF18331 PKHD-type hydroxylase C-terminal domain FD63_13010 PF02424 ApbE family FD63_13015 PF00258 Flavodoxin FD63_13015 PF00175 Oxidoreductase NAD-binding domain FD63_13015 PF00667 FAD binding domain FD63_13025 PF00486 Transcriptional regulatory protein, C terminal FD63_13025 PF00072 Response regulator receiver domain FD63_13050 PF01636 Phosphotransferase enzyme family FD63_13055 PF00483 Nucleotidyl transferase FD63_13060 PF00308 Bacterial dnaA protein FD63_13065 PF01594 AI-2E family transporter FD63_13075 PF02769 AIR synthase related protein, C-terminal domain FD63_13075 PF00586 AIR synthase related protein, N-terminal domain FD63_13090 PF00551 Formyl transferase FD63_13115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FD63_13125 PF01380 SIS domain FD63_13125 PF00571 CBS domain FD63_13145 PF00005 ABC transporter FD63_13150 PF00309 Sigma-54 factor, Activator interacting domain (AID) FD63_13150 PF04963 Sigma-54 factor, core binding domain FD63_13150 PF04552 Sigma-54, DNA binding domain FD63_13155 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FD63_13160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FD63_13165 PF07475 HPr Serine kinase C-terminal domain FD63_13165 PF02603 HPr Serine kinase N terminus FD63_13170 PF03668 P-loop ATPase protein family FD63_13180 PF00381 PTS HPr component phosphorylation site FD63_13185 PF00391 PEP-utilising enzyme, mobile domain FD63_13185 PF02896 PEP-utilising enzyme, TIM barrel domain FD63_13185 PF05524 PEP-utilising enzyme, N-terminal FD63_13190 PF00571 CBS domain FD63_13190 PF01769 Divalent cation transporter FD63_13190 PF03448 MgtE intracellular N domain FD63_13205 PF03600 Citrate transporter FD63_13210 PF00324 Amino acid permease FD63_13220 PF00672 HAMP domain FD63_13220 PF02203 Tar ligand binding domain homologue FD63_13220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_13240 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FD63_13240 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FD63_13245 PF03652 Holliday junction resolvase FD63_13250 PF02622 Uncharacterized ACR, COG1678 FD63_13260 PF00958 GMP synthase C terminal domain FD63_13260 PF00117 Glutamine amidotransferase class-I FD63_13260 PF03352 Methyladenine glycosylase FD63_13260 PF13302 Acetyltransferase (GNAT) domain FD63_13260 PF13673 Acetyltransferase (GNAT) domain FD63_13265 PF00437 Type II/IV secretion system protein FD63_13270 PF00437 Type II/IV secretion system protein FD63_13275 PF01168 Alanine racemase, N-terminal domain FD63_13285 PF03807 NADP oxidoreductase coenzyme F420-dependent FD63_13285 PF14748 Pyrroline-5-carboxylate reductase dimerisation FD63_13295 PF00376 MerR family regulatory protein FD63_13295 PF09278 MerR, DNA binding FD63_13310 PF00583 Acetyltransferase (GNAT) family FD63_13315 PF01243 Pyridoxamine 5'-phosphate oxidase FD63_13315 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FD63_13320 PF01202 Shikimate kinase FD63_13325 PF01761 3-dehydroquinate synthase FD63_13330 PF02321 Outer membrane efflux protein FD63_13335 PF00873 AcrB/AcrD/AcrF family FD63_13340 PF13533 Biotin-lipoyl like FD63_13350 PF01208 Uroporphyrinogen decarboxylase (URO-D) FD63_13355 PF07690 Major Facilitator Superfamily FD63_13365 PF00512 His Kinase A (phospho-acceptor) domain FD63_13365 PF00072 Response regulator receiver domain FD63_13365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_13365 PF00672 HAMP domain FD63_13365 PF01627 Hpt domain FD63_13365 PF17149 Periplasmic sensor domain found in signal transduction proteins FD63_13375 PF01292 Prokaryotic cytochrome b561 FD63_13390 PF03313 Serine dehydratase alpha chain FD63_13390 PF03315 Serine dehydratase beta chain FD63_13395 PF00990 Diguanylate cyclase, GGDEF domain FD63_13405 PF00742 Homoserine dehydrogenase FD63_13405 PF00696 Amino acid kinase family FD63_13405 PF03447 Homoserine dehydrogenase, NAD binding domain FD63_13410 PF01053 Cys/Met metabolism PLP-dependent enzyme FD63_13415 PF00561 alpha/beta hydrolase fold FD63_13425 PF16658 Class II release factor RF3, C-terminal domain FD63_13425 PF00009 Elongation factor Tu GTP binding domain FD63_13430 PF03006 Haemolysin-III related FD63_13435 PF05170 AsmA family FD63_13440 PF00571 CBS domain FD63_13445 PF00535 Glycosyl transferase family 2 FD63_13450 PF00912 Transglycosylase FD63_13455 PF01430 Hsp33 protein FD63_13465 PF00593 TonB dependent receptor FD63_13465 PF07715 TonB-dependent Receptor Plug Domain FD63_13470 PF01527 Transposase FD63_13475 PF13276 HTH-like domain FD63_13475 PF13333 Integrase core domain FD63_13475 PF00665 Integrase core domain FD63_13485 PF00440 Bacterial regulatory proteins, tetR family FD63_13495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FD63_13495 PF02770 Acyl-CoA dehydrogenase, middle domain FD63_13495 PF09317 Domain of unknown function (DUF1974) FD63_13495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FD63_13500 PF01070 FMN-dependent dehydrogenase FD63_13515 PF00348 Polyprenyl synthetase FD63_13520 PF00067 Cytochrome P450 FD63_13535 PF00067 Cytochrome P450 FD63_13540 PF00067 Cytochrome P450 FD63_13545 PF00067 Cytochrome P450 FD63_13560 PF05199 GMC oxidoreductase FD63_13560 PF00732 GMC oxidoreductase FD63_13590 PF01597 Glycine cleavage H-protein FD63_13595 PF08669 Glycine cleavage T-protein C-terminal barrel domain FD63_13595 PF01571 Aminomethyltransferase folate-binding domain FD63_13605 PF16200 C-terminal region of band_7 FD63_13605 PF01145 SPFH domain / Band 7 family FD63_13615 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FD63_13620 PF03819 MazG nucleotide pyrophosphohydrolase domain FD63_13625 PF00459 Inositol monophosphatase family FD63_13630 PF00293 NUDIX domain FD63_13635 PF00202 Aminotransferase class-III FD63_13640 PF04452 RNA methyltransferase FD63_13650 PF02685 Glucokinase FD63_13665 PF01476 LysM domain FD63_13665 PF00704 Glycosyl hydrolases family 18 FD63_13670 PF07691 PA14 domain FD63_13670 PF02838 Glycosyl hydrolase family 20, domain 2 FD63_13670 PF00728 Glycosyl hydrolase family 20, catalytic domain FD63_13680 PF00933 Glycosyl hydrolase family 3 N terminal domain FD63_13680 PF14310 Fibronectin type III-like domain FD63_13680 PF07691 PA14 domain FD63_13680 PF01915 Glycosyl hydrolase family 3 C-terminal domain FD63_13700 PF07971 Glycosyl hydrolase family 92 FD63_13700 PF17678 Glycosyl hydrolase family 92 N-terminal domain FD63_13705 PF01301 Glycosyl hydrolases family 35 FD63_13735 PF13683 Integrase core domain FD63_13735 PF13276 HTH-like domain FD63_13740 PF01527 Transposase FD63_13775 PF04717 Type VI secretion system, phage-baseplate injector FD63_13775 PF16671 Actin cross-linking domain FD63_13785 PF00004 ATPase family associated with various cellular activities (AAA) FD63_13785 PF07724 AAA domain (Cdc48 subfamily) FD63_13785 PF17871 AAA lid domain FD63_13785 PF10431 C-terminal, D2-small domain, of ClpB protein FD63_13855 PF01527 Transposase FD63_13860 PF13683 Integrase core domain FD63_13860 PF13276 HTH-like domain FD63_13945 PF00691 OmpA family FD63_13945 PF04972 BON domain FD63_14010 PF04717 Type VI secretion system, phage-baseplate injector FD63_14020 PF03377 TAL effector repeat FD63_14025 PF03377 TAL effector repeat FD63_14085 PF00994 Probable molybdopterin binding domain FD63_14095 PF03976 Polyphosphate kinase 2 (PPK2) FD63_14105 PF00708 Acylphosphatase FD63_14115 PF03631 Virulence factor BrkB FD63_14120 PF03358 NADPH-dependent FMN reductase FD63_14135 PF04073 Aminoacyl-tRNA editing domain FD63_14145 PF00082 Subtilase family FD63_14145 PF04151 Bacterial pre-peptidase C-terminal domain FD63_14150 PF01063 Amino-transferase class IV FD63_14165 PF02233 NAD(P) transhydrogenase beta subunit FD63_14170 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FD63_14190 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FD63_14190 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FD63_14210 PF01367 5'-3' exonuclease, C-terminal SAM fold FD63_14210 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FD63_14210 PF00476 DNA polymerase family A FD63_14210 PF01612 3'-5' exonuclease FD63_14215 PF00293 NUDIX domain FD63_14230 PF00561 alpha/beta hydrolase fold FD63_14245 PF01527 Transposase FD63_14250 PF13276 HTH-like domain FD63_14250 PF13683 Integrase core domain FD63_14255 PF01527 Transposase FD63_14260 PF00665 Integrase core domain FD63_14260 PF13333 Integrase core domain FD63_14260 PF13276 HTH-like domain FD63_14275 PF07715 TonB-dependent Receptor Plug Domain FD63_14275 PF00593 TonB dependent receptor FD63_14290 PF02254 TrkA-N domain FD63_14290 PF00999 Sodium/hydrogen exchanger family FD63_14305 PF07715 TonB-dependent Receptor Plug Domain FD63_14305 PF00593 TonB dependent receptor FD63_14305 PF07660 Secretin and TonB N terminus short domain FD63_14315 PF04183 IucA / IucC family FD63_14315 PF06276 Ferric iron reductase FhuF-like transporter FD63_14320 PF07690 Major Facilitator Superfamily FD63_14325 PF06276 Ferric iron reductase FhuF-like transporter FD63_14325 PF04183 IucA / IucC family FD63_14330 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FD63_14330 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FD63_14340 PF07769 psiF repeat FD63_14345 PF01053 Cys/Met metabolism PLP-dependent enzyme FD63_14360 PF17871 AAA lid domain FD63_14360 PF00004 ATPase family associated with various cellular activities (AAA) FD63_14360 PF07724 AAA domain (Cdc48 subfamily) FD63_14360 PF02861 Clp amino terminal domain, pathogenicity island component FD63_14360 PF10431 C-terminal, D2-small domain, of ClpB protein FD63_14400 PF07715 TonB-dependent Receptor Plug Domain FD63_14400 PF00593 TonB dependent receptor FD63_14410 PF02358 Trehalose-phosphatase FD63_14415 PF00723 Glycosyl hydrolases family 15 FD63_14420 PF00982 Glycosyltransferase family 20 FD63_14425 PF01011 PQQ enzyme repeat FD63_14445 PF00672 HAMP domain FD63_14445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_14445 PF02203 Tar ligand binding domain homologue FD63_14460 PF00849 RNA pseudouridylate synthase FD63_14465 PF13525 Outer membrane lipoprotein FD63_14475 PF00005 ABC transporter FD63_14480 PF00528 Binding-protein-dependent transport system inner membrane component FD63_14490 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FD63_14495 PF03781 Sulfatase-modifying factor enzyme 1 FD63_14495 PF12867 DinB superfamily FD63_14505 PF02540 NAD synthase FD63_14505 PF00795 Carbon-nitrogen hydrolase FD63_14520 PF00549 CoA-ligase FD63_14520 PF02629 CoA binding domain FD63_14525 PF00549 CoA-ligase FD63_14525 PF08442 ATP-grasp domain FD63_14530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_14530 PF00512 His Kinase A (phospho-acceptor) domain FD63_14535 PF00158 Sigma-54 interaction domain FD63_14535 PF00072 Response regulator receiver domain FD63_14535 PF02954 Bacterial regulatory protein, Fis family FD63_14545 PF02661 Fic/DOC family FD63_14550 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FD63_14550 PF00437 Type II/IV secretion system protein FD63_14555 PF00482 Type II secretion system (T2SS), protein F FD63_14560 PF01478 Type IV leader peptidase family FD63_14560 PF06750 Bacterial Peptidase A24 N-terminal domain FD63_14565 PF01121 Dephospho-CoA kinase FD63_14570 PF11808 Phosphate regulon sensor protein PhoR FD63_14570 PF00989 PAS fold FD63_14570 PF00512 His Kinase A (phospho-acceptor) domain FD63_14570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_14575 PF00072 Response regulator receiver domain FD63_14575 PF00486 Transcriptional regulatory protein, C terminal FD63_14585 PF18030 RimK PreATP-grasp domain FD63_14585 PF08443 RimK-like ATP-grasp domain FD63_14590 PF00593 TonB dependent receptor FD63_14590 PF07660 Secretin and TonB N terminus short domain FD63_14590 PF07715 TonB-dependent Receptor Plug Domain FD63_14595 PF04185 Phosphoesterase family FD63_14595 PF05506 Domain of unknown function (DUF756) FD63_14620 PF01053 Cys/Met metabolism PLP-dependent enzyme FD63_14645 PF02597 ThiS family FD63_14645 PF05690 Thiazole biosynthesis protein ThiG FD63_14650 PF05690 Thiazole biosynthesis protein ThiG FD63_14655 PF02390 Putative methyltransferase FD63_14660 PF03600 Citrate transporter FD63_14660 PF02080 TrkA-C domain FD63_14675 PF01557 Fumarylacetoacetate (FAA) hydrolase family FD63_14680 PF01741 Large-conductance mechanosensitive channel, MscL FD63_14690 PF00356 Bacterial regulatory proteins, lacI family FD63_14705 PF00588 SpoU rRNA Methylase family FD63_14705 PF08032 RNA 2'-O ribose methyltransferase substrate binding FD63_14715 PF01235 Sodium:alanine symporter family FD63_14735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_14735 PF02203 Tar ligand binding domain homologue FD63_14735 PF00672 HAMP domain FD63_14740 PF00009 Elongation factor Tu GTP binding domain FD63_14745 PF01507 Phosphoadenosine phosphosulfate reductase family FD63_14750 PF00258 Flavodoxin FD63_14750 PF00667 FAD binding domain FD63_14750 PF00175 Oxidoreductase NAD-binding domain FD63_14755 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FD63_14755 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FD63_14760 PF01507 Phosphoadenosine phosphosulfate reductase family FD63_14790 PF03960 ArsC family FD63_14795 PF00072 Response regulator receiver domain FD63_14795 PF00672 HAMP domain FD63_14795 PF01627 Hpt domain FD63_14795 PF00512 His Kinase A (phospho-acceptor) domain FD63_14795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_14805 PF03466 LysR substrate binding domain FD63_14805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD63_14810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FD63_14810 PF14824 Sirohaem biosynthesis protein central FD63_14810 PF10414 Sirohaem synthase dimerisation region FD63_14815 PF00291 Pyridoxal-phosphate dependent enzyme FD63_14825 PF00266 Aminotransferase class-V FD63_14830 PF07687 Peptidase dimerisation domain FD63_14830 PF01546 Peptidase family M20/M25/M40 FD63_14850 PF01156 Inosine-uridine preferring nucleoside hydrolase FD63_14870 PF00274 Fructose-bisphosphate aldolase class-I FD63_14875 PF02887 Pyruvate kinase, alpha/beta domain FD63_14875 PF00224 Pyruvate kinase, barrel domain FD63_14885 PF00162 Phosphoglycerate kinase FD63_14900 PF00672 HAMP domain FD63_14900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_14920 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FD63_14920 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FD63_14925 PF03922 OmpW family FD63_14930 PF03922 OmpW family FD63_14945 PF01022 Bacterial regulatory protein, arsR family FD63_14950 PF00753 Metallo-beta-lactamase superfamily FD63_14960 PF00528 Binding-protein-dependent transport system inner membrane component FD63_14965 PF03459 TOBE domain FD63_14965 PF00005 ABC transporter FD63_14990 PF01476 LysM domain FD63_14990 PF03734 L,D-transpeptidase catalytic domain FD63_14995 PF04225 Opacity-associated protein A LysM-like domain FD63_14995 PF01551 Peptidase family M23 FD63_15020 PF02779 Transketolase, pyrimidine binding domain FD63_15020 PF02780 Transketolase, C-terminal domain FD63_15020 PF00456 Transketolase, thiamine diphosphate binding domain FD63_15025 PF00375 Sodium:dicarboxylate symporter family FD63_15040 PF13519 von Willebrand factor type A domain FD63_15050 PF01882 Protein of unknown function DUF58 FD63_15055 PF07726 ATPase family associated with various cellular activities (AAA) FD63_15055 PF17863 AAA lid domain FD63_15060 PF03958 Bacterial type II/III secretion system short domain FD63_15060 PF00263 Bacterial type II and III secretion system protein FD63_15060 PF07660 Secretin and TonB N terminus short domain FD63_15060 PF11741 AMIN domain FD63_15100 PF00557 Metallopeptidase family M24 FD63_15105 PF00557 Metallopeptidase family M24 FD63_15105 PF05195 Aminopeptidase P, N-terminal domain FD63_15110 PF03695 Uncharacterised protein family (UPF0149) FD63_15115 PF03707 Bacterial signalling protein N terminal repeat FD63_15115 PF00990 Diguanylate cyclase, GGDEF domain FD63_15115 PF00563 EAL domain FD63_15125 PF05164 Cell division protein ZapA FD63_15130 PF01812 5-formyltetrahydrofolate cyclo-ligase family FD63_15140 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FD63_15150 PF13369 Transglutaminase-like superfamily FD63_15155 PF00301 Rubredoxin FD63_15160 PF02581 Thiamine monophosphate synthase FD63_15185 PF00202 Aminotransferase class-III FD63_15195 PF00196 Bacterial regulatory proteins, luxR family FD63_15195 PF00072 Response regulator receiver domain FD63_15200 PF00127 Copper binding proteins, plastocyanin/azurin family FD63_15210 PF00034 Cytochrome c FD63_15210 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FD63_15220 PF00202 Aminotransferase class-III FD63_15230 PF00480 ROK family FD63_15245 PF01569 PAP2 superfamily FD63_15255 PF08245 Mur ligase middle domain FD63_15255 PF02875 Mur ligase family, glutamate ligase domain FD63_15255 PF01225 Mur ligase family, catalytic domain FD63_15265 PF00365 Phosphofructokinase FD63_15285 PF03030 Inorganic H+ pyrophosphatase FD63_15295 PF00719 Inorganic pyrophosphatase FD63_15310 PF01964 Radical SAM ThiC family FD63_15310 PF13667 ThiC-associated domain FD63_15315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_15315 PF00672 HAMP domain FD63_15320 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FD63_15320 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FD63_15325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FD63_15325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FD63_15325 PF00205 Thiamine pyrophosphate enzyme, central domain FD63_15335 PF00291 Pyridoxal-phosphate dependent enzyme FD63_15340 PF00682 HMGL-like FD63_15340 PF08502 LeuA allosteric (dimerisation) domain FD63_15350 PF00330 Aconitase family (aconitate hydratase) FD63_15360 PF00694 Aconitase C-terminal domain FD63_15365 PF00180 Isocitrate/isopropylmalate dehydrogenase FD63_15370 PF00990 Diguanylate cyclase, GGDEF domain FD63_15385 PF02321 Outer membrane efflux protein FD63_15390 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FD63_15395 PF03279 Bacterial lipid A biosynthesis acyltransferase FD63_15420 PF00664 ABC transporter transmembrane region FD63_15420 PF03412 Peptidase C39 family FD63_15420 PF00005 ABC transporter FD63_15425 PF00529 HlyD membrane-fusion protein of T1SS FD63_15440 PF00390 Malic enzyme, N-terminal domain FD63_15440 PF03949 Malic enzyme, NAD binding domain FD63_15440 PF01515 Phosphate acetyl/butaryl transferase FD63_15445 PF00375 Sodium:dicarboxylate symporter family FD63_15455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_15455 PF00512 His Kinase A (phospho-acceptor) domain FD63_15465 PF00072 Response regulator receiver domain FD63_15465 PF00196 Bacterial regulatory proteins, luxR family FD63_15475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_15475 PF08521 Two-component sensor kinase N-terminal FD63_15475 PF00512 His Kinase A (phospho-acceptor) domain FD63_15480 PF00072 Response regulator receiver domain FD63_15480 PF00486 Transcriptional regulatory protein, C terminal FD63_15490 PF03600 Citrate transporter FD63_15495 PF00106 short chain dehydrogenase FD63_15500 PF00356 Bacterial regulatory proteins, lacI family FD63_15515 PF00128 Alpha amylase, catalytic domain FD63_15535 PF03193 RsgA GTPase FD63_15540 PF00155 Aminotransferase class I and II FD63_15560 PF01522 Polysaccharide deacetylase FD63_15565 PF00462 Glutaredoxin FD63_15585 PF01979 Amidohydrolase family FD63_15590 PF01979 Amidohydrolase family FD63_15590 PF00449 Urease alpha-subunit, N-terminal domain FD63_15620 PF02567 Phenazine biosynthesis-like protein FD63_15630 PF00756 Putative esterase FD63_15635 PF04828 Glutathione-dependent formaldehyde-activating enzyme FD63_15640 PF00107 Zinc-binding dehydrogenase FD63_15640 PF08240 Alcohol dehydrogenase GroES-like domain FD63_15645 PF02583 Metal-sensitive transcriptional repressor FD63_15650 PF00486 Transcriptional regulatory protein, C terminal FD63_15650 PF00072 Response regulator receiver domain FD63_15655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_15655 PF16527 Two-component sensor protein CpxA, periplasmic domain FD63_15655 PF00512 His Kinase A (phospho-acceptor) domain FD63_15655 PF00672 HAMP domain FD63_15670 PF04107 Glutamate-cysteine ligase family 2(GCS2) FD63_15690 PF01926 50S ribosome-binding GTPase FD63_15695 PF00034 Cytochrome c FD63_15700 PF01323 DSBA-like thioredoxin domain FD63_15705 PF01323 DSBA-like thioredoxin domain FD63_15715 PF07715 TonB-dependent Receptor Plug Domain FD63_15715 PF00593 TonB dependent receptor FD63_15720 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FD63_15720 PF01464 Transglycosylase SLT domain FD63_15725 PF01743 Poly A polymerase head domain FD63_15725 PF12627 Probable RNA and SrmB- binding site of polymerase A FD63_15725 PF01966 HD domain FD63_15735 PF01979 Amidohydrolase family FD63_15740 PF01380 SIS domain FD63_15745 PF00356 Bacterial regulatory proteins, lacI family FD63_15750 PF07690 Major Facilitator Superfamily FD63_15755 PF00392 Bacterial regulatory proteins, gntR family FD63_15755 PF07702 UTRA domain FD63_15770 PF02837 Glycosyl hydrolases family 2, sugar binding domain FD63_15770 PF16355 Domain of unknown function (DUF4982) FD63_15770 PF00703 Glycosyl hydrolases family 2 FD63_15770 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 FD63_15770 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FD63_15805 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FD63_15815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_15815 PF00512 His Kinase A (phospho-acceptor) domain FD63_15820 PF00072 Response regulator receiver domain FD63_15825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_15825 PF00989 PAS fold FD63_15825 PF00512 His Kinase A (phospho-acceptor) domain FD63_15835 PF04972 BON domain FD63_15840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FD63_15840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FD63_15845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FD63_15845 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FD63_15855 PF01370 NAD dependent epimerase/dehydratase family FD63_15855 PF08338 Domain of unknown function (DUF1731) FD63_15875 PF02773 S-adenosylmethionine synthetase, C-terminal domain FD63_15875 PF02772 S-adenosylmethionine synthetase, central domain FD63_15875 PF00438 S-adenosylmethionine synthetase, N-terminal domain FD63_15880 PF00328 Histidine phosphatase superfamily (branch 2) FD63_15905 PF00311 Phosphoenolpyruvate carboxylase FD63_15910 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FD63_15910 PF05221 S-adenosyl-L-homocysteine hydrolase FD63_15915 PF13649 Methyltransferase domain FD63_15940 PF02219 Methylenetetrahydrofolate reductase FD63_15950 PF00293 NUDIX domain FD63_15960 PF02810 SEC-C motif FD63_15960 PF07517 SecA DEAD-like domain FD63_15960 PF01043 SecA preprotein cross-linking domain FD63_15960 PF07516 SecA Wing and Scaffold domain FD63_15965 PF01476 LysM domain FD63_15965 PF08525 Opacity-associated protein A N-terminal motif FD63_15965 PF01551 Peptidase family M23 FD63_15975 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FD63_15980 PF00091 Tubulin/FtsZ family, GTPase domain FD63_15980 PF12327 FtsZ family, C-terminal domain FD63_15985 PF02491 SHS2 domain inserted in FTSA FD63_15990 PF03799 Cell division protein FtsQ FD63_15990 PF08478 POTRA domain, FtsQ-type FD63_15995 PF01820 D-ala D-ala ligase N-terminus FD63_15995 PF07478 D-ala D-ala ligase C-terminus FD63_16000 PF08245 Mur ligase middle domain FD63_16000 PF01225 Mur ligase family, catalytic domain FD63_16000 PF02875 Mur ligase family, glutamate ligase domain FD63_16005 PF04101 Glycosyltransferase family 28 C-terminal domain FD63_16005 PF03033 Glycosyltransferase family 28 N-terminal domain FD63_16010 PF01098 Cell cycle protein FD63_16015 PF00953 Glycosyl transferase family 4 FD63_16020 PF08245 Mur ligase middle domain FD63_16020 PF02875 Mur ligase family, glutamate ligase domain FD63_16020 PF01225 Mur ligase family, catalytic domain FD63_16025 PF01225 Mur ligase family, catalytic domain FD63_16025 PF08245 Mur ligase middle domain FD63_16025 PF02875 Mur ligase family, glutamate ligase domain FD63_16030 PF03717 Penicillin-binding Protein dimerisation domain FD63_16030 PF00905 Penicillin binding protein transpeptidase domain FD63_16035 PF04999 Cell division protein FtsL FD63_16040 PF01795 MraW methylase family FD63_16045 PF02381 MraZ protein, putative antitoxin-like FD63_16060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FD63_16070 PF02021 Uncharacterised protein family UPF0102 FD63_16075 PF04307 LexA-binding, inner membrane-associated putative hydrolase FD63_16080 PF02913 FAD linked oxidases, C-terminal domain FD63_16080 PF01565 FAD binding domain FD63_16085 PF00486 Transcriptional regulatory protein, C terminal FD63_16085 PF00072 Response regulator receiver domain FD63_16090 PF13493 Domain of unknown function (DUF4118) FD63_16090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_16090 PF13492 GAF domain FD63_16090 PF02702 Osmosensitive K+ channel His kinase sensor domain FD63_16090 PF00512 His Kinase A (phospho-acceptor) domain FD63_16095 PF02669 K+-transporting ATPase, c chain FD63_16105 PF03814 Potassium-transporting ATPase A subunit FD63_16130 PF02769 AIR synthase related protein, C-terminal domain FD63_16130 PF00586 AIR synthase related protein, N-terminal domain FD63_16135 PF01029 NusB family FD63_16140 PF00885 6,7-dimethyl-8-ribityllumazine synthase FD63_16150 PF00677 Lumazine binding domain FD63_16155 PF01872 RibD C-terminal domain FD63_16155 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FD63_16165 PF03477 ATP cone domain FD63_16170 PF00464 Serine hydroxymethyltransferase FD63_16195 PF07690 Major Facilitator Superfamily FD63_16200 PF12848 ABC transporter FD63_16200 PF00005 ABC transporter FD63_16205 PF01327 Polypeptide deformylase FD63_16225 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FD63_16225 PF13632 Glycosyl transferase family group 2 FD63_16235 PF02350 UDP-N-acetylglucosamine 2-epimerase FD63_16240 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) FD63_16245 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FD63_16245 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FD63_16280 PF07715 TonB-dependent Receptor Plug Domain FD63_16280 PF00593 TonB dependent receptor FD63_16290 PF00392 Bacterial regulatory proteins, gntR family FD63_16290 PF07702 UTRA domain FD63_16300 PF03958 Bacterial type II/III secretion system short domain FD63_16300 PF00263 Bacterial type II and III secretion system protein FD63_16310 PF10741 Type II secretion system (T2SS), protein M subtype b FD63_16315 PF05137 Fimbrial assembly protein (PilN) FD63_16320 PF03934 Type II secretion system (T2SS), protein K FD63_16330 PF07963 Prokaryotic N-terminal methylation motif FD63_16335 PF12019 Type II transport protein GspH FD63_16340 PF08334 Type II secretion system (T2SS), protein G FD63_16345 PF00482 Type II secretion system (T2SS), protein F FD63_16350 PF00437 Type II/IV secretion system protein FD63_16350 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FD63_16355 PF04151 Bacterial pre-peptidase C-terminal domain FD63_16355 PF00082 Subtilase family FD63_16375 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FD63_16375 PF02769 AIR synthase related protein, C-terminal domain FD63_16375 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FD63_16380 PF13098 Thioredoxin-like domain FD63_16380 PF10411 Disulfide bond isomerase protein N-terminus FD63_16385 PF02899 Phage integrase, N-terminal SAM-like domain FD63_16385 PF00589 Phage integrase family FD63_16410 PF00883 Cytosol aminopeptidase family, catalytic domain FD63_16410 PF02789 Cytosol aminopeptidase family, N-terminal domain FD63_16415 PF04364 DNA polymerase III chi subunit, HolC FD63_16430 PF00133 tRNA synthetases class I (I, L, M and V) FD63_16430 PF10458 Valyl tRNA synthetase tRNA binding arm FD63_16430 PF08264 Anticodon-binding domain of tRNA FD63_16450 PF01066 CDP-alcohol phosphatidyltransferase FD63_16460 PF03129 Anticodon binding domain FD63_16460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FD63_16460 PF04073 Aminoacyl-tRNA editing domain FD63_16465 PF00816 H-NS histone family FD63_16475 PF02405 Permease MlaE FD63_16480 PF00005 ABC transporter FD63_16485 PF03886 ABC-type transport auxiliary lipoprotein component FD63_16485 PF02470 MlaD protein FD63_16505 PF14307 Glycosyltransferase WbsX FD63_16505 PF05045 Rhamnan synthesis protein F FD63_16510 PF01144 Coenzyme A transferase FD63_16515 PF01144 Coenzyme A transferase FD63_16520 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FD63_16520 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FD63_16520 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FD63_16520 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FD63_16525 PF01050 Mannose-6-phosphate isomerase FD63_16525 PF00483 Nucleotidyl transferase FD63_16530 PF04321 RmlD substrate binding domain FD63_16535 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FD63_16540 PF00483 Nucleotidyl transferase FD63_16545 PF16363 GDP-mannose 4,6 dehydratase FD63_16550 PF01012 Electron transfer flavoprotein domain FD63_16555 PF01012 Electron transfer flavoprotein domain FD63_16555 PF00766 Electron transfer flavoprotein FAD-binding domain FD63_16565 PF01040 UbiA prenyltransferase family FD63_16570 PF01565 FAD binding domain FD63_16570 PF04030 D-arabinono-1,4-lactone oxidase FD63_16575 PF00106 short chain dehydrogenase FD63_16580 PF01370 NAD dependent epimerase/dehydratase family FD63_16600 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FD63_16600 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD63_16620 PF00535 Glycosyl transferase family 2 FD63_16645 PF00535 Glycosyl transferase family 2 FD63_16650 PF00535 Glycosyl transferase family 2 FD63_16655 PF00398 Ribosomal RNA adenine dimethylase FD63_16660 PF00005 ABC transporter FD63_16670 PF01053 Cys/Met metabolism PLP-dependent enzyme FD63_16675 PF00571 CBS domain FD63_16675 PF00291 Pyridoxal-phosphate dependent enzyme FD63_16695 PF00437 Type II/IV secretion system protein FD63_16700 PF14497 Glutathione S-transferase, C-terminal domain FD63_16700 PF02798 Glutathione S-transferase, N-terminal domain FD63_16710 PF00271 Helicase conserved C-terminal domain FD63_16710 PF00270 DEAD/DEAH box helicase FD63_16715 PF01242 6-pyruvoyl tetrahydropterin synthase FD63_16730 PF13185 GAF domain FD63_16740 PF07715 TonB-dependent Receptor Plug Domain FD63_16740 PF00593 TonB dependent receptor FD63_16745 PF13419 Haloacid dehalogenase-like hydrolase FD63_16750 PF00817 impB/mucB/samB family FD63_16750 PF11799 impB/mucB/samB family C-terminal domain FD63_16750 PF11798 IMS family HHH motif FD63_16755 PF07977 FabA-like domain FD63_16760 PF00109 Beta-ketoacyl synthase, N-terminal domain FD63_16760 PF02801 Beta-ketoacyl synthase, C-terminal domain FD63_16775 PF01432 Peptidase family M3 FD63_16790 PF00403 Heavy-metal-associated domain FD63_16795 PF00376 MerR family regulatory protein FD63_16795 PF09278 MerR, DNA binding FD63_16805 PF00394 Multicopper oxidase FD63_16805 PF07731 Multicopper oxidase FD63_16805 PF07732 Multicopper oxidase FD63_16810 PF05275 Copper resistance protein B precursor (CopB) FD63_16820 PF01380 SIS domain FD63_16825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FD63_16830 PF00005 ABC transporter FD63_16835 PF12704 MacB-like periplasmic core domain FD63_16835 PF02687 FtsX-like permease family FD63_16835 PF00005 ABC transporter FD63_16840 PF00005 ABC transporter FD63_16840 PF02687 FtsX-like permease family FD63_16840 PF12704 MacB-like periplasmic core domain FD63_16845 PF12704 MacB-like periplasmic core domain FD63_16845 PF00005 ABC transporter FD63_16845 PF02687 FtsX-like permease family FD63_16850 PF12704 MacB-like periplasmic core domain FD63_16850 PF02687 FtsX-like permease family FD63_16850 PF00005 ABC transporter FD63_16860 PF00072 Response regulator receiver domain FD63_16860 PF00158 Sigma-54 interaction domain FD63_16860 PF02954 Bacterial regulatory protein, Fis family FD63_16865 PF00989 PAS fold FD63_16865 PF00512 His Kinase A (phospho-acceptor) domain FD63_16865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_16875 PF12804 MobA-like NTP transferase domain FD63_16875 PF14602 Hexapeptide repeat of succinyl-transferase FD63_16875 PF00132 Bacterial transferase hexapeptide (six repeats) FD63_16890 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FD63_16890 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FD63_16895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FD63_16895 PF02874 ATP synthase alpha/beta family, beta-barrel domain FD63_16900 PF00231 ATP synthase FD63_16905 PF00306 ATP synthase alpha/beta chain, C terminal domain FD63_16905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FD63_16905 PF02874 ATP synthase alpha/beta family, beta-barrel domain FD63_16910 PF00213 ATP synthase delta (OSCP) subunit FD63_16915 PF00430 ATP synthase B/B' CF(0) FD63_16920 PF00137 ATP synthase subunit C FD63_16925 PF00119 ATP synthase A chain FD63_16940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FD63_16940 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD63_16945 PF02817 e3 binding domain FD63_16945 PF00364 Biotin-requiring enzyme FD63_16945 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FD63_16970 PF03180 NLPA lipoprotein FD63_16975 PF00528 Binding-protein-dependent transport system inner membrane component FD63_16980 PF09383 NIL domain FD63_16980 PF00005 ABC transporter FD63_16985 PF00892 EamA-like transporter family FD63_16990 PF04461 Protein of unknown function (DUF520) FD63_17000 PF00849 RNA pseudouridylate synthase FD63_17000 PF01479 S4 domain FD63_17005 PF05175 Methyltransferase small domain FD63_17005 PF08468 Methyltransferase small domain N-terminal FD63_17015 PF07995 Glucose / Sorbosone dehydrogenase FD63_17025 PF00072 Response regulator receiver domain FD63_17025 PF00512 His Kinase A (phospho-acceptor) domain FD63_17025 PF01627 Hpt domain FD63_17025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_17025 PF00497 Bacterial extracellular solute-binding proteins, family 3 FD63_17025 PF00989 PAS fold FD63_17050 PF00842 Alanine racemase, C-terminal domain FD63_17050 PF01168 Alanine racemase, N-terminal domain FD63_17055 PF01266 FAD dependent oxidoreductase FD63_17060 PF01037 Lrp/AsnC ligand binding domain FD63_17075 PF01641 SelR domain FD63_17080 PF01618 MotA/TolQ/ExbB proton channel family FD63_17085 PF13677 Membrane MotB of proton-channel complex MotA/MotB FD63_17085 PF00691 OmpA family FD63_17125 PF01061 ABC-2 type transporter FD63_17130 PF00005 ABC transporter FD63_17135 PF00999 Sodium/hydrogen exchanger family FD63_17140 PF05711 Macrocin-O-methyltransferase (TylF) FD63_17145 PF02469 Fasciclin domain FD63_17150 PF03167 Uracil DNA glycosylase superfamily FD63_17160 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FD63_17165 PF03466 LysR substrate binding domain FD63_17165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD63_17170 PF03358 NADPH-dependent FMN reductase FD63_17185 PF00248 Aldo/keto reductase family FD63_17195 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FD63_17195 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FD63_17200 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family FD63_17220 PF17151 Periplasmic sensor domain FD63_17220 PF00990 Diguanylate cyclase, GGDEF domain FD63_17230 PF08448 PAS fold FD63_17230 PF08447 PAS fold FD63_17230 PF00990 Diguanylate cyclase, GGDEF domain FD63_17230 PF00563 EAL domain FD63_17250 PF08889 WbqC-like protein family FD63_17255 PF00535 Glycosyl transferase family 2 FD63_17260 PF13649 Methyltransferase domain FD63_17270 PF00892 EamA-like transporter family FD63_17280 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FD63_17290 PF00593 TonB dependent receptor FD63_17290 PF07715 TonB-dependent Receptor Plug Domain FD63_17300 PF04397 LytTr DNA-binding domain FD63_17300 PF00072 Response regulator receiver domain FD63_17330 PF13520 Amino acid permease FD63_17340 PF00553 Cellulose binding domain FD63_17340 PF00150 Cellulase (glycosyl hydrolase family 5) FD63_17355 PF01204 Trehalase FD63_17360 PF01464 Transglycosylase SLT domain FD63_17380 PF12833 Helix-turn-helix domain FD63_17380 PF06719 AraC-type transcriptional regulator N-terminus FD63_17395 PF01544 CorA-like Mg2+ transporter protein FD63_17400 PF00324 Amino acid permease FD63_17405 PF00892 EamA-like transporter family FD63_17420 PF07759 Protein of unknown function (DUF1615) FD63_17425 PF08533 Beta-galactosidase C-terminal domain FD63_17425 PF08532 Beta-galactosidase trimerisation domain FD63_17425 PF02449 Beta-galactosidase FD63_17430 PF17189 Glycosyl hydrolase family 30 beta sandwich domain FD63_17495 PF00456 Transketolase, thiamine diphosphate binding domain FD63_17495 PF17831 Pyruvate dehydrogenase E1 component middle domain FD63_17500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD63_17500 PF02743 Cache domain FD63_17500 PF00672 HAMP domain FD63_17515 PF04264 YceI-like domain FD63_17520 PF00881 Nitroreductase family FD63_17540 PF03009 Glycerophosphoryl diester phosphodiesterase family FD63_17565 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FD63_17565 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FD63_17570 PF01541 GIY-YIG catalytic domain FD63_17575 PF00793 DAHP synthetase I family FD63_17585 PF07715 TonB-dependent Receptor Plug Domain FD63_17585 PF00593 TonB dependent receptor FD63_17605 PF13749 Putative ATP-dependent DNA helicase recG C-terminal FD63_17605 PF00270 DEAD/DEAH box helicase FD63_17605 PF17191 RecG wedge domain FD63_17610 PF00271 Helicase conserved C-terminal domain FD63_17610 PF00176 SNF2 family N-terminal domain FD63_17615 PF00118 TCP-1/cpn60 chaperonin family FD63_17620 PF00166 Chaperonin 10 Kd subunit FD63_17625 PF03091 CutA1 divalent ion tolerance protein FD63_17630 PF11412 Disulphide bond corrector protein DsbC FD63_17630 PF02683 Cytochrome C biogenesis protein transmembrane region FD63_17635 PF00578 AhpC/TSA family FD63_17650 PF01220 Dehydroquinase class II FD63_17655 PF00364 Biotin-requiring enzyme FD63_17660 PF00289 Biotin carboxylase, N-terminal domain FD63_17660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FD63_17660 PF02785 Biotin carboxylase C-terminal domain FD63_17690 PF01381 Helix-turn-helix FD63_17700 PF02954 Bacterial regulatory protein, Fis family FD63_17730 PF12147 Putative methyltransferase FD63_17730 PF12146 Serine aminopeptidase, S33 FD63_17745 PF02142 MGS-like domain FD63_17745 PF01808 AICARFT/IMPCHase bienzyme FD63_17750 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FD63_17750 PF02843 Phosphoribosylglycinamide synthetase, C domain FD63_17750 PF02844 Phosphoribosylglycinamide synthetase, N domain FD63_17765 PF12805 FUSC-like inner membrane protein yccS FD63_17810 PF00293 NUDIX domain FD63_17810 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FD63_17810 PF09297 NADH pyrophosphatase zinc ribbon domain FD63_17815 PF01521 Iron-sulphur cluster biosynthesis FD63_17835 PF00990 Diguanylate cyclase, GGDEF domain FD63_17835 PF00072 Response regulator receiver domain FD63_17835 PF00563 EAL domain FD63_17840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FD63_17840 PF01627 Hpt domain FD63_17840 PF00512 His Kinase A (phospho-acceptor) domain FD63_17840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_17840 PF00672 HAMP domain FD63_17840 PF00072 Response regulator receiver domain FD63_17845 PF00210 Ferritin-like domain FD63_17850 PF04324 BFD-like [2Fe-2S] binding domain FD63_17855 PF00293 NUDIX domain FD63_17870 PF00380 Ribosomal protein S9/S16 FD63_17875 PF00572 Ribosomal protein L13 FD63_17880 PF03232 Ubiquinone biosynthesis protein COQ7 FD63_17890 PF00893 Small Multidrug Resistance protein FD63_17895 PF02675 S-adenosylmethionine decarboxylase FD63_17900 PF00027 Cyclic nucleotide-binding domain FD63_17900 PF00325 Bacterial regulatory proteins, crp family FD63_17905 PF01925 Sulfite exporter TauE/SafE FD63_17920 PF00218 Indole-3-glycerol phosphate synthase FD63_17925 PF00591 Glycosyl transferase family, a/b domain FD63_17925 PF02885 Glycosyl transferase family, helical bundle domain FD63_17935 PF00117 Glutamine amidotransferase class-I FD63_17945 PF00425 chorismate binding enzyme FD63_17945 PF04715 Anthranilate synthase component I, N terminal region FD63_17950 PF00781 Diacylglycerol kinase catalytic domain FD63_17955 PF00583 Acetyltransferase (GNAT) family FD63_17960 PF00834 Ribulose-phosphate 3 epimerase family FD63_17965 PF05099 Tellurite resistance protein TerB FD63_17965 PF00226 DnaJ domain FD63_17970 PF01259 SAICAR synthetase FD63_17980 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family FD63_17985 PF13244 Domain of unknown function (DUF4040) FD63_17985 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FD63_17985 PF00361 Proton-conducting membrane transporter FD63_17985 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FD63_17990 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FD63_17995 PF00361 Proton-conducting membrane transporter FD63_18000 PF01899 Na+/H+ ion antiporter subunit FD63_18005 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FD63_18010 PF03334 Na+/H+ antiporter subunit FD63_18015 PF01699 Sodium/calcium exchanger protein FD63_18030 PF04209 homogentisate 1,2-dioxygenase FD63_18035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FD63_18050 PF00854 POT family FD63_18055 PF03301 Tryptophan 2,3-dioxygenase FD63_18070 PF00676 Dehydrogenase E1 component FD63_18075 PF02779 Transketolase, pyrimidine binding domain FD63_18075 PF02780 Transketolase, C-terminal domain FD63_18085 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FD63_18085 PF02817 e3 binding domain FD63_18085 PF00364 Biotin-requiring enzyme FD63_18115 PF00271 Helicase conserved C-terminal domain FD63_18115 PF00270 DEAD/DEAH box helicase FD63_18130 PF00294 pfkB family carbohydrate kinase FD63_18135 PF00990 Diguanylate cyclase, GGDEF domain FD63_18140 PF05661 Protein of unknown function (DUF808) FD63_18145 PF02733 Dak1 domain FD63_18145 PF02734 DAK2 domain FD63_18160 PF12794 Mechanosensitive ion channel inner membrane domain 1 FD63_18160 PF00924 Mechanosensitive ion channel FD63_18160 PF12795 Mechanosensitive ion channel porin domain FD63_18165 PF16197 Ketoacyl-synthetase C-terminal extension FD63_18165 PF00107 Zinc-binding dehydrogenase FD63_18165 PF00109 Beta-ketoacyl synthase, N-terminal domain FD63_18165 PF02801 Beta-ketoacyl synthase, C-terminal domain FD63_18165 PF00698 Acyl transferase domain FD63_18165 PF08240 Alcohol dehydrogenase GroES-like domain FD63_18165 PF08659 KR domain FD63_18165 PF00550 Phosphopantetheine attachment site FD63_18165 PF14765 Polyketide synthase dehydratase FD63_18170 PF00328 Histidine phosphatase superfamily (branch 2) FD63_18185 PF08281 Sigma-70, region 4 FD63_18185 PF12680 SnoaL-like domain FD63_18185 PF04542 Sigma-70 region 2 FD63_18200 PF07729 FCD domain FD63_18200 PF00392 Bacterial regulatory proteins, gntR family FD63_18215 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FD63_18220 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG FD63_18230 PF01039 Carboxyl transferase domain FD63_18235 PF06857 Malonate decarboxylase delta subunit (MdcD) FD63_18240 PF16957 Malonate decarboxylase, alpha subunit, transporter FD63_18245 PF01614 Bacterial transcriptional regulator FD63_18245 PF09339 IclR helix-turn-helix domain FD63_18250 PF07690 Major Facilitator Superfamily FD63_18255 PF05336 L-rhamnose mutarotase FD63_18260 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FD63_18260 PF13378 Enolase C-terminal domain-like FD63_18265 PF01557 Fumarylacetoacetate (FAA) hydrolase family FD63_18280 PF00248 Aldo/keto reductase family FD63_18285 PF13419 Haloacid dehalogenase-like hydrolase FD63_18300 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FD63_18300 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FD63_18305 PF00230 Major intrinsic protein FD63_18310 PF01266 FAD dependent oxidoreductase FD63_18310 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FD63_18315 PF08220 DeoR-like helix-turn-helix domain FD63_18315 PF00455 DeoR C terminal sensor domain FD63_18320 PF07308 Protein of unknown function (DUF1456) FD63_18365 PF00326 Prolyl oligopeptidase family FD63_18365 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region FD63_18380 PF00593 TonB dependent receptor FD63_18380 PF07715 TonB-dependent Receptor Plug Domain FD63_18425 PF13180 PDZ domain FD63_18425 PF00595 PDZ domain FD63_18445 PF01594 AI-2E family transporter FD63_18450 PF13419 Haloacid dehalogenase-like hydrolase FD63_18455 PF02789 Cytosol aminopeptidase family, N-terminal domain FD63_18455 PF00883 Cytosol aminopeptidase family, catalytic domain FD63_18465 PF00199 Catalase FD63_18480 PF13276 HTH-like domain FD63_18480 PF00665 Integrase core domain FD63_18480 PF13333 Integrase core domain FD63_18485 PF01527 Transposase FD63_18490 PF00005 ABC transporter FD63_18495 PF02687 FtsX-like permease family FD63_18495 PF12704 MacB-like periplasmic core domain FD63_18510 PF00892 EamA-like transporter family FD63_18515 PF00892 EamA-like transporter family FD63_18525 PF00753 Metallo-beta-lactamase superfamily FD63_18530 PF00579 tRNA synthetases class I (W and Y) FD63_18565 PF03309 Type III pantothenate kinase FD63_18570 PF03099 Biotin/lipoate A/B protein ligase family FD63_18570 PF02237 Biotin protein ligase C terminal domain FD63_18580 PF06167 Glucose-regulated metallo-peptidase M90 FD63_18595 PF00512 His Kinase A (phospho-acceptor) domain FD63_18595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_18595 PF00672 HAMP domain FD63_18600 PF00486 Transcriptional regulatory protein, C terminal FD63_18600 PF00072 Response regulator receiver domain FD63_18610 PF01207 Dihydrouridine synthase (Dus) FD63_18620 PF08267 Cobalamin-independent synthase, N-terminal domain FD63_18620 PF01717 Cobalamin-independent synthase, Catalytic domain FD63_18635 PF00551 Formyl transferase FD63_18645 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FD63_18645 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FD63_18650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FD63_18655 PF02146 Sir2 family FD63_18660 PF00486 Transcriptional regulatory protein, C terminal FD63_18660 PF00072 Response regulator receiver domain FD63_18665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_18665 PF08448 PAS fold FD63_18665 PF00512 His Kinase A (phospho-acceptor) domain FD63_18665 PF13188 PAS domain FD63_18665 PF00072 Response regulator receiver domain FD63_18675 PF04151 Bacterial pre-peptidase C-terminal domain FD63_18675 PF00082 Subtilase family FD63_18680 PF07690 Major Facilitator Superfamily FD63_18685 PF03466 LysR substrate binding domain FD63_18685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD63_18695 PF13276 HTH-like domain FD63_18695 PF13683 Integrase core domain FD63_18700 PF01527 Transposase FD63_18720 PF00268 Ribonucleotide reductase, small chain FD63_18725 PF03477 ATP cone domain FD63_18725 PF02867 Ribonucleotide reductase, barrel domain FD63_18725 PF00317 Ribonucleotide reductase, all-alpha domain FD63_18735 PF02566 OsmC-like protein FD63_18740 PF01047 MarR family FD63_18745 PF03969 AFG1-like ATPase FD63_18765 PF02492 CobW/HypB/UreG, nucleotide-binding domain FD63_18765 PF07683 Cobalamin synthesis protein cobW C-terminal domain FD63_18775 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FD63_18780 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FD63_18790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FD63_18790 PF02770 Acyl-CoA dehydrogenase, middle domain FD63_18790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FD63_18795 PF01039 Carboxyl transferase domain FD63_18805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FD63_18805 PF00364 Biotin-requiring enzyme FD63_18805 PF00289 Biotin carboxylase, N-terminal domain FD63_18805 PF02785 Biotin carboxylase C-terminal domain FD63_18820 PF13380 CoA binding domain FD63_18820 PF00583 Acetyltransferase (GNAT) family FD63_18820 PF13607 Succinyl-CoA ligase like flavodoxin domain FD63_18825 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FD63_18825 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FD63_18830 PF00723 Glycosyl hydrolases family 15 FD63_18840 PF00072 Response regulator receiver domain FD63_18840 PF00486 Transcriptional regulatory protein, C terminal FD63_18845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_18845 PF00512 His Kinase A (phospho-acceptor) domain FD63_18845 PF08448 PAS fold FD63_18845 PF13188 PAS domain FD63_18845 PF00072 Response regulator receiver domain FD63_18855 PF04151 Bacterial pre-peptidase C-terminal domain FD63_18855 PF00082 Subtilase family FD63_18865 PF05166 YcgL domain FD63_18870 PF00109 Beta-ketoacyl synthase, N-terminal domain FD63_18870 PF02801 Beta-ketoacyl synthase, C-terminal domain FD63_18880 PF00535 Glycosyl transferase family 2 FD63_18885 PF01494 FAD binding domain FD63_18915 PF07977 FabA-like domain FD63_18930 PF00550 Phosphopantetheine attachment site FD63_18935 PF04820 Tryptophan halogenase FD63_18955 PF02322 Cytochrome bd terminal oxidase subunit II FD63_18960 PF01654 Cytochrome bd terminal oxidase subunit I FD63_18975 PF00296 Luciferase-like monooxygenase FD63_18980 PF01218 Coproporphyrinogen III oxidase FD63_18990 PF04239 Protein of unknown function (DUF421) FD63_18995 PF00476 DNA polymerase family A FD63_18995 PF01612 3'-5' exonuclease FD63_18995 PF01367 5'-3' exonuclease, C-terminal SAM fold FD63_18995 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FD63_19010 PF00582 Universal stress protein family FD63_19015 PF14602 Hexapeptide repeat of succinyl-transferase FD63_19015 PF12464 Maltose acetyltransferase FD63_19030 PF00580 UvrD/REP helicase N-terminal domain FD63_19030 PF13361 UvrD-like helicase C-terminal domain FD63_19040 PF13396 Phospholipase_D-nuclease N-terminal FD63_19040 PF13091 PLD-like domain FD63_19045 PF00471 Ribosomal protein L33 FD63_19050 PF00830 Ribosomal L28 family FD63_19075 PF00535 Glycosyl transferase family 2 FD63_19080 PF01370 NAD dependent epimerase/dehydratase family FD63_19085 PF02195 ParB-like nuclease domain FD63_19085 PF17762 HTH domain found in ParB protein FD63_19090 PF13614 AAA domain FD63_19095 PF02527 rRNA small subunit methyltransferase G FD63_19115 PF01648 4'-phosphopantetheinyl transferase superfamily FD63_19120 PF04226 Transglycosylase associated protein FD63_19140 PF00171 Aldehyde dehydrogenase family FD63_19150 PF07690 Major Facilitator Superfamily FD63_19160 PF13193 AMP-binding enzyme C-terminal domain FD63_19160 PF16177 Acetyl-coenzyme A synthetase N-terminus FD63_19160 PF00501 AMP-binding enzyme FD63_19165 PF00072 Response regulator receiver domain FD63_19165 PF00196 Bacterial regulatory proteins, luxR family FD63_19170 PF02659 Putative manganese efflux pump FD63_19180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD63_19180 PF00512 His Kinase A (phospho-acceptor) domain FD63_19195 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FD63_19195 PF06165 Glycosyltransferase family 36 FD63_19210 PF00982 Glycosyltransferase family 20 FD63_19225 PF04357 TamB, inner membrane protein subunit of TAM complex FD63_19230 PF01103 Surface antigen FD63_19230 PF07244 Surface antigen variable number repeat FD63_19230 PF17243 POTRA domain TamA domain 1 FD63_19250 PF04337 Protein of unknown function, DUF480 FD63_19265 PF13276 HTH-like domain FD63_19265 PF13683 Integrase core domain FD63_19270 PF01527 Transposase FD63_19275 PF01527 Transposase FD63_19280 PF13276 HTH-like domain FD63_19280 PF13683 Integrase core domain FD63_19285 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain FD63_19285 PF05860 haemagglutination activity domain FD63_19285 PF13332 Hemagglutinin repeat FD63_19285 PF05594 Haemagluttinin repeat FD63_19285 PF13018 Extended Signal Peptide of Type V secretion system FD63_19295 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FD63_19295 PF17287 POTRA domain FD63_19295 PF08479 POTRA domain, ShlB-type FD63_19305 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FD63_19310 PF04820 Tryptophan halogenase FD63_19320 PF00356 Bacterial regulatory proteins, lacI family FD63_19330 PF01553 Acyltransferase FD63_19355 PF04616 Glycosyl hydrolases family 43 FD63_19370 PF00331 Glycosyl hydrolase family 10 FD63_19370 PF00553 Cellulose binding domain FD63_19370 PF03422 Carbohydrate binding module (family 6) FD63_19380 PF00331 Glycosyl hydrolase family 10 FD63_19390 PF08450 SMP-30/Gluconolactonase/LRE-like region FD63_19400 PF01527 Transposase FD63_19405 PF13683 Integrase core domain FD63_19405 PF13276 HTH-like domain FD63_19410 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FD63_19425 PF01232 Mannitol dehydrogenase Rossmann domain FD63_19425 PF08125 Mannitol dehydrogenase C-terminal domain FD63_19440 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FD63_19440 PF13378 Enolase C-terminal domain-like FD63_19450 PF07488 Glycosyl hydrolase family 67 middle domain FD63_19450 PF07477 Glycosyl hydrolase family 67 C-terminus FD63_19450 PF03648 Glycosyl hydrolase family 67 N-terminus FD63_19455 PF00356 Bacterial regulatory proteins, lacI family FD63_19465 PF01171 PP-loop family FD63_19470 PF04381 Putative exonuclease, RdgC FD63_19485 PF12697 Alpha/beta hydrolase family FD63_19490 PF00762 Ferrochelatase FD63_19500 PF02416 mttA/Hcf106 family FD63_19505 PF02416 mttA/Hcf106 family FD63_19510 PF00902 Sec-independent protein translocase protein (TatC) FD63_19520 PF00117 Glutamine amidotransferase class-I FD63_19520 PF00958 GMP synthase C terminal domain FD63_19525 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FD63_19525 PF00437 Type II/IV secretion system protein FD63_19530 PF02091 Glycyl-tRNA synthetase alpha subunit FD63_19540 PF05746 DALR anticodon binding domain FD63_19540 PF02092 Glycyl-tRNA synthetase beta subunit FD63_19545 PF13361 UvrD-like helicase C-terminal domain FD63_19545 PF00580 UvrD/REP helicase N-terminal domain FD63_19550 PF00265 Thymidine kinase FD63_19565 PF04349 Periplasmic glucan biosynthesis protein, MdoG FD63_19575 PF00069 Protein kinase domain FD63_19590 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FD63_19590 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FD63_19590 PF06827 Zinc finger found in FPG and IleRS FD63_19605 PF00005 ABC transporter FD63_19615 PF12631 MnmE helical domain FD63_19615 PF01926 50S ribosome-binding GTPase FD63_19615 PF10396 GTP-binding protein TrmE N-terminus FD63_19620 PF14849 YidC periplasmic domain FD63_19620 PF02096 60Kd inner membrane protein FD63_19625 PF00825 Ribonuclease P FD63_19630 PF00468 Ribosomal protein L34