FD63_00005 SM00382 ATPases associated with a variety of cellular activities FD63_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain FD63_00010 SM00480 DNA polymerase III beta subunit FD63_00020 SM00387 Histidine kinase-like ATPases FD63_00020 SM00433 TopoisomeraseII FD63_00035 SM00028 Tetratricopeptide repeats FD63_00075 SM00155 Phospholipase D. Active site motifs. FD63_00080 SM00729 Elongator protein 3, MiaB family, Radical SAM FD63_00085 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. FD63_00120 SM00382 ATPases associated with a variety of cellular activities FD63_00130 SM00829 Enoylreductase FD63_00150 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen FD63_00295 SM00267 diguanylate cyclase FD63_00335 SM00354 helix_turn _helix lactose operon repressor FD63_00370 SM00344 helix_turn_helix ASNC type FD63_00410 SM00014 Acid phosphatase homologues FD63_00415 SM00014 Acid phosphatase homologues FD63_00450 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. FD63_00485 SM00421 helix_turn_helix, Lux Regulon FD63_00485 SM00448 cheY-homologous receiver domain FD63_00490 SM00387 Histidine kinase-like ATPases FD63_00490 SM00388 His Kinase A (phosphoacceptor) domain FD63_00545 SM00382 ATPases associated with a variety of cellular activities FD63_00715 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_00715 SM00091 PAS domain FD63_00830 SM00487 DEAD-like helicases superfamily FD63_00830 SM00490 helicase superfamily c-terminal domain FD63_00930 SM00855 Phosphoglycerate mutase family FD63_00935 SM00867 YceI-like domain FD63_00940 SM00155 Phospholipase D. Active site motifs. FD63_00950 SM00563 Phosphate acyltransferases FD63_00960 SM00028 Tetratricopeptide repeats FD63_00975 SM01230 FD63_00975 FD63_00980 SM00938 Nitrogen regulatory protein P-II FD63_00995 SM00387 Histidine kinase-like ATPases FD63_00995 SM00388 His Kinase A (phosphoacceptor) domain FD63_01000 SM00382 ATPases associated with a variety of cellular activities FD63_01000 SM00448 cheY-homologous receiver domain FD63_01055 SM00450 Rhodanese Homology Domain FD63_01125 SM00028 Tetratricopeptide repeats FD63_01125 SM00862 Transcriptional regulatory protein, C terminal FD63_01180 SM00563 Phosphate acyltransferases FD63_01220 SM00100 Cyclic nucleotide-monophosphate binding domain FD63_01220 SM00267 diguanylate cyclase FD63_01225 SM00028 Tetratricopeptide repeats FD63_01290 SM00829 Enoylreductase FD63_01315 SM00487 DEAD-like helicases superfamily FD63_01315 SM00490 helicase superfamily c-terminal domain FD63_01315 SM00847 Helicase associated domain (HA2) Add an annotation FD63_01340 SM00382 ATPases associated with a variety of cellular activities FD63_01355 SM00530 Helix-turn-helix XRE-family like proteins FD63_01365 SM00382 ATPases associated with a variety of cellular activities FD63_01420 SM01004 Delta-aminolevulinic acid dehydratase FD63_01435 SM00477 DNA/RNA non-specific endonuclease FD63_01435 SM00892 DNA/RNA non-specific endonuclease FD63_01460 SM00491 FD63_01460 FD63_01475 SM01060 FD63_01475 FD63_01480 SM00248 ankyrin repeats FD63_01660 SM00090 RIO-like kinase FD63_01680 SM00052 Putative diguanylate phosphodiesterase FD63_01685 SM01228 FD63_01685 FD63_01730 SM00729 Elongator protein 3, MiaB family, Radical SAM FD63_01730 SM00876 Biotin and Thiamin Synthesis associated domain FD63_01775 SM00382 ATPases associated with a variety of cellular activities FD63_01785 SM00938 Nitrogen regulatory protein P-II FD63_01805 SM00823 Phosphopantetheine attachment site FD63_01805 SM00824 Thioesterase FD63_01840 SM00822 FD63_01840 FD63_01850 SM00836 DALR anticodon binding domain FD63_01850 SM01016 Arginyl tRNA synthetase N terminal dom FD63_01940 SM00829 Enoylreductase FD63_01960 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FD63_01960 SM00245 tail specific protease FD63_02075 SM00400 zinc finger FD63_02075 SM00493 FD63_02075 FD63_02075 SM00766 DNA primase DnaG DnaB-binding FD63_02100 SM00905 Dihydroneopterin aldolase FD63_02115 SM01217 FD63_02115 FD63_02160 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain FD63_02175 SM00644 FD63_02175 FD63_02225 SM01150 FD63_02225 FD63_02265 SM00257 Lysin motif FD63_02275 SM00530 Helix-turn-helix XRE-family like proteins FD63_02290 SM00487 DEAD-like helicases superfamily FD63_02290 SM00490 helicase superfamily c-terminal domain FD63_02325 SM00357 Cold shock protein domain FD63_02325 SM00382 ATPases associated with a variety of cellular activities FD63_02325 SM00959 Rho termination factor, N-terminal domain FD63_02335 SM00487 DEAD-like helicases superfamily FD63_02335 SM00490 helicase superfamily c-terminal domain FD63_02340 SM00382 ATPases associated with a variety of cellular activities FD63_02350 SM00448 cheY-homologous receiver domain FD63_02355 SM00986 Uracil DNA glycosylase superfamily FD63_02355 SM00987 UreE urease accessory protein, C-terminal domain FD63_02380 SM00487 DEAD-like helicases superfamily FD63_02380 SM00490 helicase superfamily c-terminal domain FD63_02430 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain FD63_02430 SM00437 Bacterial DNA topoisomerase I DNA-binding domain FD63_02430 SM00493 FD63_02430 FD63_02455 SM00257 Lysin motif FD63_02565 SM00354 helix_turn _helix lactose operon repressor FD63_02575 SM00642 Alpha-amylase domain FD63_02580 SM00642 Alpha-amylase domain FD63_02585 SM00642 Alpha-amylase domain FD63_02685 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_02685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_02685 SM01049 FD63_02685 FD63_02720 SM00267 diguanylate cyclase FD63_02720 SM00387 Histidine kinase-like ATPases FD63_02720 SM00388 His Kinase A (phosphoacceptor) domain FD63_02725 SM00382 ATPases associated with a variety of cellular activities FD63_02760 SM00387 Histidine kinase-like ATPases FD63_02760 SM00388 His Kinase A (phosphoacceptor) domain FD63_02765 SM00382 ATPases associated with a variety of cellular activities FD63_02765 SM00448 cheY-homologous receiver domain FD63_02790 SM00487 DEAD-like helicases superfamily FD63_02805 SM01040 BRO family, N-terminal domain FD63_02830 SM00448 cheY-homologous receiver domain FD63_02830 SM01012 FD63_02830 FD63_02855 SM00926 Molybdopterin oxidoreductase Fe4S4 domain FD63_02870 SM00642 Alpha-amylase domain FD63_02880 SM00642 Alpha-amylase domain FD63_02890 SM00642 Alpha-amylase domain FD63_02895 SM00642 Alpha-amylase domain FD63_02910 SM00448 cheY-homologous receiver domain FD63_02915 SM00387 Histidine kinase-like ATPases FD63_02915 SM00388 His Kinase A (phosphoacceptor) domain FD63_02935 SM00448 cheY-homologous receiver domain FD63_02935 SM00850 LytTr DNA-binding domain FD63_03025 SM00382 ATPases associated with a variety of cellular activities FD63_03025 SM01086 C-terminal, D2-small domain, of ClpB protein FD63_03055 SM01263 FD63_03055 FD63_03085 SM00268 Actin FD63_03115 SM00710 Parallel beta-helix repeats FD63_03135 SM00936 Penicillin-binding protein 5, C-terminal domain FD63_03145 SM01126 FD63_03145 FD63_03175 SM00729 Elongator protein 3, MiaB family, Radical SAM FD63_03180 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FD63_03180 SM00245 tail specific protease FD63_03210 SM01126 FD63_03210 FD63_03235 SM00729 Elongator protein 3, MiaB family, Radical SAM FD63_03255 SM00072 Guanylate kinase homologues. FD63_03260 SM01409 FD63_03260 FD63_03265 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FD63_03265 SM00954 Region found in RelA / SpoT proteins FD63_03280 SM00487 DEAD-like helicases superfamily FD63_03280 SM00490 helicase superfamily c-terminal domain FD63_03370 SM00382 ATPases associated with a variety of cellular activities FD63_03380 SM00448 cheY-homologous receiver domain FD63_03380 SM00862 Transcriptional regulatory protein, C terminal FD63_03385 SM00387 Histidine kinase-like ATPases FD63_03385 SM00388 His Kinase A (phosphoacceptor) domain FD63_03445 SM00650 Ribosomal RNA adenine dimethylases FD63_03610 SM00382 ATPases associated with a variety of cellular activities FD63_03655 SM00028 Tetratricopeptide repeats FD63_03660 SM00937 FD63_03660 FD63_03670 SM00028 Tetratricopeptide repeats FD63_03690 SM01400 FD63_03690 FD63_03740 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. FD63_03740 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. FD63_03745 SM00649 Ribosomal protein L11/L12 FD63_03770 SM00663 RNA polymerase I subunit A N-terminus FD63_03785 SM00838 Elongation factor G C-terminus FD63_03785 SM00889 Elongation factor G, domain IV FD63_03795 SM01403 FD63_03795 FD63_03815 SM01382 FD63_03815 FD63_03815 SM01383 FD63_03815 FD63_03830 SM00322 K homology RNA-binding domain FD63_03850 SM01374 FD63_03850 FD63_03855 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. FD63_03915 SM00363 S4 RNA-binding domain FD63_03915 SM01390 FD63_03915 FD63_03920 SM00662 RNA polymerases D FD63_03955 SM00838 Elongation factor G C-terminus FD63_04040 SM00829 Enoylreductase FD63_04085 SM00363 S4 RNA-binding domain FD63_04110 SM00382 ATPases associated with a variety of cellular activities FD63_04120 SM00829 Enoylreductase FD63_04130 SM00855 Phosphoglycerate mutase family FD63_04175 SM00014 Acid phosphatase homologues FD63_04195 SM00387 Histidine kinase-like ATPases FD63_04195 SM00388 His Kinase A (phosphoacceptor) domain FD63_04200 SM00448 cheY-homologous receiver domain FD63_04200 SM00862 Transcriptional regulatory protein, C terminal FD63_04220 SM01329 FD63_04220 FD63_04270 SM00382 ATPases associated with a variety of cellular activities FD63_04270 SM00994 ClpX C4-type zinc finger FD63_04270 SM01086 C-terminal, D2-small domain, of ClpB protein FD63_04275 SM00382 ATPases associated with a variety of cellular activities FD63_04275 SM00464 Found in ATP-dependent protease La (LON) FD63_04280 SM00411 bacterial (prokaryotic) histone like domain FD63_04310 SM00257 Lysin motif FD63_04315 SM00849 Metallo-beta-lactamase superfamily FD63_04330 SM00479 FD63_04330 FD63_04335 SM00331 Sigma factor PP2C-like phosphatases FD63_04335 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain FD63_04370 SM00729 Elongator protein 3, MiaB family, Radical SAM FD63_04405 SM00382 ATPases associated with a variety of cellular activities FD63_04415 SM00493 FD63_04415 FD63_04430 SM00460 Transglutaminase/protease-like homologues FD63_04440 SM00382 ATPases associated with a variety of cellular activities FD63_04480 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. FD63_04485 SM00822 FD63_04485 FD63_04495 SM00825 Beta-ketoacyl synthase FD63_04540 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain FD63_04540 SM01232 FD63_04540 FD63_04545 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FD63_04570 SM00481 DNA polymerase alpha chain like domain FD63_04630 SM01359 FD63_04630 FD63_04630 SM01360 FD63_04630 FD63_04670 SM00271 DnaJ molecular chaperone homology domain FD63_04675 SM00448 cheY-homologous receiver domain FD63_04680 SM00829 Enoylreductase FD63_04685 SM00244 prohibitin homologues FD63_04690 SM00244 prohibitin homologues FD63_04700 SM00788 Adenylosuccinate synthetase FD63_04840 SM01060 FD63_04840 FD63_04870 SM00382 ATPases associated with a variety of cellular activities FD63_04905 SM00448 cheY-homologous receiver domain FD63_04905 SM00862 Transcriptional regulatory protein, C terminal FD63_04910 SM00387 Histidine kinase-like ATPases FD63_04910 SM00388 His Kinase A (phosphoacceptor) domain FD63_04950 SM00421 helix_turn_helix, Lux Regulon FD63_04950 SM00448 cheY-homologous receiver domain FD63_04965 SM00478 endonuclease III FD63_04990 SM00491 FD63_04990 FD63_05030 SM00448 cheY-homologous receiver domain FD63_05035 SM00448 cheY-homologous receiver domain FD63_05040 SM00260 Two component signalling adaptor domain FD63_05045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_05050 SM00073 Histidine Phosphotransfer domain FD63_05050 SM00260 Two component signalling adaptor domain FD63_05050 SM00387 Histidine kinase-like ATPases FD63_05050 SM00448 cheY-homologous receiver domain FD63_05050 SM01231 FD63_05050 FD63_05060 SM00260 Two component signalling adaptor domain FD63_05095 SM00834 Putative regulatory protein FD63_05115 SM00458 Ricin-type beta-trefoil FD63_05135 SM00278 Helix-hairpin-helix DNA-binding motif class 1 FD63_05145 SM00382 ATPases associated with a variety of cellular activities FD63_05180 SM00028 Tetratricopeptide repeats FD63_05215 SM00341 Helicase and RNase D C-terminal FD63_05215 SM00487 DEAD-like helicases superfamily FD63_05215 SM00490 helicase superfamily c-terminal domain FD63_05215 SM00956 FD63_05215 FD63_05230 SM00382 ATPases associated with a variety of cellular activities FD63_05230 SM00487 DEAD-like helicases superfamily FD63_05230 SM00490 helicase superfamily c-terminal domain FD63_05230 SM00847 Helicase associated domain (HA2) Add an annotation FD63_05270 SM00954 Region found in RelA / SpoT proteins FD63_05310 SM00244 prohibitin homologues FD63_05335 SM00054 EF-hand, calcium binding motif FD63_05405 SM00904 Riboflavin kinase FD63_05465 SM00382 ATPases associated with a variety of cellular activities FD63_05495 SM00862 Transcriptional regulatory protein, C terminal FD63_05580 SM00382 ATPases associated with a variety of cellular activities FD63_05595 SM00342 helix_turn_helix, arabinose operon control protein FD63_05650 SM00382 ATPases associated with a variety of cellular activities FD63_05695 SM00813 Alpha-L-arabinofuranosidase C-terminus FD63_05710 SM00382 ATPases associated with a variety of cellular activities FD63_05710 SM00962 SRP54-type protein, GTPase domain FD63_05710 SM00963 SRP54-type protein, helical bundle domain FD63_05755 SM00363 S4 RNA-binding domain FD63_05775 SM00533 DNA-binding domain of DNA mismatch repair MUTS family FD63_05775 SM00534 ATPase domain of DNA mismatch repair MUTS family FD63_05780 SM00812 Alpha-L-fucosidase FD63_05825 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FD63_05830 SM00838 Elongation factor G C-terminus FD63_05845 SM00358 Double-stranded RNA binding motif FD63_05845 SM00535 Ribonuclease III family FD63_05860 SM00448 cheY-homologous receiver domain FD63_05870 SM01118 FD63_05870 FD63_05895 SM00357 Cold shock protein domain FD63_05910 SM00487 DEAD-like helicases superfamily FD63_05910 SM00490 helicase superfamily c-terminal domain FD63_05940 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_05940 SM00267 diguanylate cyclase FD63_05970 SM00869 Autotransporter beta-domain FD63_05975 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FD63_05980 SM00944 Pro-kumamolisin, activation domain FD63_06055 SM01038 Beta galactosidase small chain FD63_06060 SM00345 helix_turn_helix gluconate operon transcriptional repressor FD63_06060 SM00895 FD63_06060 FD63_06065 SM00564 beta-propeller repeat FD63_06070 SM00387 Histidine kinase-like ATPases FD63_06070 SM00388 His Kinase A (phosphoacceptor) domain FD63_06090 SM00363 S4 RNA-binding domain FD63_06125 SM00052 Putative diguanylate phosphodiesterase FD63_06395 SM00316 Ribosomal protein S1-like RNA-binding domain FD63_06465 SM00382 ATPases associated with a variety of cellular activities FD63_06465 SM01086 C-terminal, D2-small domain, of ClpB protein FD63_06500 SM00240 Forkhead associated domain FD63_06525 SM00331 Sigma factor PP2C-like phosphatases FD63_06525 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain FD63_06560 SM00448 cheY-homologous receiver domain FD63_06560 SM00862 Transcriptional regulatory protein, C terminal FD63_06575 SM00977 TilS substrate C-terminal domain FD63_06585 SM00098 Alkaline phosphatase homologues FD63_06665 SM01160 FD63_06665 FD63_06705 SM00028 Tetratricopeptide repeats FD63_06795 SM00257 Lysin motif FD63_06825 SM00859 Semialdehyde dehydrogenase, NAD binding domain FD63_06900 SM00822 FD63_06900 FD63_06945 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FD63_06950 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FD63_07000 SM00316 Ribosomal protein S1-like RNA-binding domain FD63_07000 SM00322 K homology RNA-binding domain FD63_07020 SM01387 FD63_07020 FD63_07025 SM00316 Ribosomal protein S1-like RNA-binding domain FD63_07025 SM00322 K homology RNA-binding domain FD63_07030 SM00052 Putative diguanylate phosphodiesterase FD63_07030 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_07055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_07055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_07060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_07065 SM00260 Two component signalling adaptor domain FD63_07080 SM00528 Domain in histone-like proteins of HNS family FD63_07085 SM00474 3'-5' exonuclease FD63_07110 SM00478 endonuclease III FD63_07115 SM00382 ATPases associated with a variety of cellular activities FD63_07115 SM00962 SRP54-type protein, GTPase domain FD63_07115 SM00963 SRP54-type protein, helical bundle domain FD63_07120 SM00342 helix_turn_helix, arabinose operon control protein FD63_07145 SM01130 FD63_07145 FD63_07235 SM00387 Histidine kinase-like ATPases FD63_07265 SM00849 Metallo-beta-lactamase superfamily FD63_07290 SM00344 helix_turn_helix ASNC type FD63_07305 SM01323 FD63_07305 FD63_07335 SM00052 Putative diguanylate phosphodiesterase FD63_07335 SM00267 diguanylate cyclase FD63_07335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_07345 SM00841 Elongation factor P, C-terminal FD63_07345 SM01185 FD63_07345 FD63_07430 SM00564 beta-propeller repeat FD63_07470 SM00840 FD63_07470 FD63_07505 SM00859 Semialdehyde dehydrogenase, NAD binding domain FD63_07525 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase FD63_07570 SM00646 FD63_07570 FD63_07655 SM00052 Putative diguanylate phosphodiesterase FD63_07655 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_07655 SM00267 diguanylate cyclase FD63_07660 SM00448 cheY-homologous receiver domain FD63_07665 SM00387 Histidine kinase-like ATPases FD63_07675 SM00014 Acid phosphatase homologues FD63_07765 SM00100 Cyclic nucleotide-monophosphate binding domain FD63_07765 SM00419 helix_turn_helix, cAMP Regulatory protein FD63_07845 SM01007 Class II Aldolase and Adducin N-terminal domain FD63_07895 SM00841 Elongation factor P, C-terminal FD63_07895 SM01185 FD63_07895 FD63_07920 SM00899 FD63_07920 FD63_07945 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain FD63_07970 SM00873 B3/4 domain FD63_07970 SM00874 tRNA synthetase B5 domain FD63_07970 SM00896 Ferredoxin-fold anticodon binding domain FD63_07975 SM00411 bacterial (prokaryotic) histone like domain FD63_07980 SM00422 helix_turn_helix, mercury resistance FD63_08050 SM00861 Transketolase, pyrimidine binding domain FD63_08055 SM00507 HNH nucleases FD63_08135 SM00646 FD63_08135 FD63_08140 SM00853 MutL C terminal dimerisation domain FD63_08140 SM01340 FD63_08140 FD63_08160 SM00822 FD63_08160 FD63_08175 SM00052 Putative diguanylate phosphodiesterase FD63_08175 SM00091 PAS domain FD63_08175 SM00267 diguanylate cyclase FD63_08185 SM01322 FD63_08185 FD63_08195 SM00357 Cold shock protein domain FD63_08235 SM00487 DEAD-like helicases superfamily FD63_08235 SM00490 helicase superfamily c-terminal domain FD63_08240 SM00382 ATPases associated with a variety of cellular activities FD63_08265 SM01217 FD63_08265 FD63_08270 SM00631 FD63_08270 FD63_08305 SM00347 helix_turn_helix multiple antibiotic resistance protein FD63_08330 SM00382 ATPases associated with a variety of cellular activities FD63_08375 SM00357 Cold shock protein domain FD63_08425 SM00382 ATPases associated with a variety of cellular activities FD63_08470 SM00822 FD63_08470 FD63_08540 SM00271 DnaJ molecular chaperone homology domain FD63_08560 SM00382 ATPases associated with a variety of cellular activities FD63_08580 SM00052 Putative diguanylate phosphodiesterase FD63_08580 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_08580 SM00267 diguanylate cyclase FD63_08600 SM00861 Transketolase, pyrimidine binding domain FD63_08610 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. FD63_08660 SM00382 ATPases associated with a variety of cellular activities FD63_08665 SM00345 helix_turn_helix gluconate operon transcriptional repressor FD63_08685 SM00984 UDP binding domain FD63_08710 SM01018 B12 binding domain FD63_08720 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FD63_08815 SM00487 DEAD-like helicases superfamily FD63_08815 SM00490 helicase superfamily c-terminal domain FD63_08890 SM00382 ATPases associated with a variety of cellular activities FD63_08895 SM00382 ATPases associated with a variety of cellular activities FD63_08945 SM00382 ATPases associated with a variety of cellular activities FD63_08975 SM00363 S4 RNA-binding domain FD63_09000 SM00354 helix_turn _helix lactose operon repressor FD63_09060 SM00382 ATPases associated with a variety of cellular activities FD63_09105 SM00382 ATPases associated with a variety of cellular activities FD63_09115 SM00849 Metallo-beta-lactamase superfamily FD63_09130 SM00382 ATPases associated with a variety of cellular activities FD63_09145 SM00226 Low molecular weight phosphatase family FD63_09155 SM00278 Helix-hairpin-helix DNA-binding motif class 1 FD63_09155 SM00465 GIY-YIG type nucleases (URI domain) FD63_09210 SM00825 Beta-ketoacyl synthase FD63_09265 SM00729 Elongator protein 3, MiaB family, Radical SAM FD63_09275 SM00382 ATPases associated with a variety of cellular activities FD63_09295 SM00421 helix_turn_helix, Lux Regulon FD63_09295 SM00448 cheY-homologous receiver domain FD63_09305 SM00316 Ribosomal protein S1-like RNA-binding domain FD63_09310 SM00363 S4 RNA-binding domain FD63_09400 SM00316 Ribosomal protein S1-like RNA-binding domain FD63_09405 SM00411 bacterial (prokaryotic) histone like domain FD63_09450 SM00562 FD63_09450 FD63_09460 SM00028 Tetratricopeptide repeats FD63_09475 SM00564 beta-propeller repeat FD63_09480 SM00382 ATPases associated with a variety of cellular activities FD63_09490 SM00852 Probable molybdopterin binding domain FD63_09495 SM00450 Rhodanese Homology Domain FD63_09520 SM00116 Domain in cystathionine beta-synthase and other proteins. FD63_09520 SM01240 FD63_09520 FD63_09530 SM00758 FD63_09530 FD63_09535 SM00382 ATPases associated with a variety of cellular activities FD63_09540 SM00387 Histidine kinase-like ATPases FD63_09540 SM00388 His Kinase A (phosphoacceptor) domain FD63_09540 SM00448 cheY-homologous receiver domain FD63_09550 SM00529 Helix-turn-helix diphteria tox regulatory element FD63_09560 SM00479 FD63_09560 FD63_09635 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FD63_09635 SM00091 PAS domain FD63_09635 SM00387 Histidine kinase-like ATPases FD63_09635 SM00388 His Kinase A (phosphoacceptor) domain FD63_09635 SM00448 cheY-homologous receiver domain FD63_09640 SM00316 Ribosomal protein S1-like RNA-binding domain FD63_09640 SM00732 Likely ribonuclease with RNase H fold. FD63_09645 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_09645 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FD63_09645 SM00091 PAS domain FD63_09645 SM00387 Histidine kinase-like ATPases FD63_09645 SM00388 His Kinase A (phosphoacceptor) domain FD63_09645 SM00448 cheY-homologous receiver domain FD63_09650 SM00448 cheY-homologous receiver domain FD63_09745 SM00342 helix_turn_helix, arabinose operon control protein FD63_09755 SM00823 Phosphopantetheine attachment site FD63_09785 SM00823 Phosphopantetheine attachment site FD63_09785 SM00824 Thioesterase FD63_09815 SM00382 ATPases associated with a variety of cellular activities FD63_09820 SM00923 MbtH-like protein FD63_09840 SM00155 Phospholipase D. Active site motifs. FD63_09910 SM00851 MGS-like domain FD63_09910 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FD63_09920 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain FD63_10110 SM00382 ATPases associated with a variety of cellular activities FD63_10130 SM00382 ATPases associated with a variety of cellular activities FD63_10130 SM00843 FD63_10130 FD63_10150 SM00316 Ribosomal protein S1-like RNA-binding domain FD63_10155 SM00382 ATPases associated with a variety of cellular activities FD63_10155 SM01086 C-terminal, D2-small domain, of ClpB protein FD63_10185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_10195 SM00382 ATPases associated with a variety of cellular activities FD63_10205 SM00052 Putative diguanylate phosphodiesterase FD63_10205 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FD63_10205 SM00091 PAS domain FD63_10205 SM00267 diguanylate cyclase FD63_10210 SM00091 PAS domain FD63_10210 SM00387 Histidine kinase-like ATPases FD63_10215 SM00052 Putative diguanylate phosphodiesterase FD63_10215 SM00267 diguanylate cyclase FD63_10215 SM00448 cheY-homologous receiver domain FD63_10220 SM00387 Histidine kinase-like ATPases FD63_10235 SM00858 FD63_10235 FD63_10240 SM00260 Two component signalling adaptor domain FD63_10240 SM00448 cheY-homologous receiver domain FD63_10285 SM00047 Lysozyme subfamily 2 FD63_10325 SM00421 helix_turn_helix, Lux Regulon FD63_10325 SM00448 cheY-homologous receiver domain FD63_10335 SM00448 cheY-homologous receiver domain FD63_10340 SM00382 ATPases associated with a variety of cellular activities FD63_10360 SM00822 FD63_10360 FD63_10365 SM00822 FD63_10365 FD63_10385 SM01126 FD63_10385 FD63_10415 SM00382 ATPases associated with a variety of cellular activities FD63_10465 SM00267 diguanylate cyclase FD63_10470 SM00267 diguanylate cyclase FD63_10485 SM00382 ATPases associated with a variety of cellular activities FD63_10485 SM00962 SRP54-type protein, GTPase domain FD63_10500 SM00448 cheY-homologous receiver domain FD63_10510 SM00073 Histidine Phosphotransfer domain FD63_10510 SM00260 Two component signalling adaptor domain FD63_10510 SM00387 Histidine kinase-like ATPases FD63_10510 SM01231 FD63_10510 FD63_10530 SM00260 Two component signalling adaptor domain FD63_10540 SM00448 cheY-homologous receiver domain FD63_10545 SM00073 Histidine Phosphotransfer domain FD63_10545 SM00260 Two component signalling adaptor domain FD63_10545 SM00387 Histidine kinase-like ATPases FD63_10545 SM01231 FD63_10545 FD63_10555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_10555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_10560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_10560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_10565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_10565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_10580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_10590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_10590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_10595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_10595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_10600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_10600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_10610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_10620 SM00260 Two component signalling adaptor domain FD63_10630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_10630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_10640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_10640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_10645 SM00138 Methyltransferase, chemotaxis proteins FD63_10655 SM00448 cheY-homologous receiver domain FD63_10660 SM00052 Putative diguanylate phosphodiesterase FD63_10660 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_10660 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FD63_10660 SM00091 PAS domain FD63_10660 SM00267 diguanylate cyclase FD63_10690 SM00966 SpoVT / AbrB like domain FD63_10715 SM00073 Histidine Phosphotransfer domain FD63_10715 SM00387 Histidine kinase-like ATPases FD63_10715 SM00388 His Kinase A (phosphoacceptor) domain FD63_10715 SM00448 cheY-homologous receiver domain FD63_10720 SM00448 cheY-homologous receiver domain FD63_10720 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FD63_10730 SM00937 FD63_10730 FD63_10755 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain FD63_10780 SM01130 FD63_10780 FD63_10795 SM00670 Large family of predicted nucleotide-binding domains FD63_10865 SM00642 Alpha-amylase domain FD63_10890 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain FD63_10900 SM00382 ATPases associated with a variety of cellular activities FD63_10940 SM00382 ATPases associated with a variety of cellular activities FD63_10950 SM01103 FD63_10950 FD63_10960 SM00257 Lysin motif FD63_10980 SM00463 Small MutS-related domain FD63_11005 SM01192 FD63_11005 FD63_11005 SM01193 FD63_11005 FD63_11030 SM00387 Histidine kinase-like ATPases FD63_11030 SM00433 TopoisomeraseII FD63_11055 SM01091 Transporter associated domain FD63_11080 SM00450 Rhodanese Homology Domain FD63_11100 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_11100 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FD63_11100 SM00091 PAS domain FD63_11100 SM00267 diguanylate cyclase FD63_11115 SM00984 UDP binding domain FD63_11125 SM00354 helix_turn _helix lactose operon repressor FD63_11150 SM00448 cheY-homologous receiver domain FD63_11150 SM00862 Transcriptional regulatory protein, C terminal FD63_11155 SM00387 Histidine kinase-like ATPases FD63_11155 SM00388 His Kinase A (phosphoacceptor) domain FD63_11160 SM01321 FD63_11160 FD63_11175 SM00382 ATPases associated with a variety of cellular activities FD63_11280 SM00830 Chorismate mutase type II FD63_11300 SM00240 Forkhead associated domain FD63_11330 SM00822 FD63_11330 FD63_11335 SM00345 helix_turn_helix gluconate operon transcriptional repressor FD63_11335 SM00866 FD63_11335 FD63_11390 SM00434 DNA Topoisomerase IV FD63_11410 SM00278 Helix-hairpin-helix DNA-binding motif class 1 FD63_11410 SM00292 breast cancer carboxy-terminal domain FD63_11410 SM00532 Ligase N family FD63_11420 SM00771 ZipA, C-terminal domain (FtsZ-binding) FD63_11425 SM00968 SMC proteins Flexible Hinge Domain FD63_11475 SM00421 helix_turn_helix, Lux Regulon FD63_11475 SM00448 cheY-homologous receiver domain FD63_11520 SM00947 Carbonic anhydrase FD63_11545 SM00479 FD63_11545 FD63_11670 SM01001 AIR carboxylase FD63_11735 SM00729 Elongator protein 3, MiaB family, Radical SAM FD63_11755 SM00116 Domain in cystathionine beta-synthase and other proteins. FD63_11755 SM01091 Transporter associated domain FD63_11790 SM00382 ATPases associated with a variety of cellular activities FD63_11825 SM01230 FD63_11825 FD63_11835 SM01230 FD63_11835 FD63_11845 SM00267 diguanylate cyclase FD63_11845 SM00448 cheY-homologous receiver domain FD63_11900 SM00530 Helix-turn-helix XRE-family like proteins FD63_11910 SM01002 Alanine dehydrogenase/PNT, C-terminal domain FD63_11910 SM01003 Alanine dehydrogenase/PNT, N-terminal domain FD63_11935 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FD63_11935 SM00091 PAS domain FD63_11935 SM00387 Histidine kinase-like ATPases FD63_11935 SM00388 His Kinase A (phosphoacceptor) domain FD63_11935 SM00448 cheY-homologous receiver domain FD63_11935 SM01079 FD63_11935 FD63_11940 SM00448 cheY-homologous receiver domain FD63_11940 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FD63_11945 SM00981 FD63_11945 FD63_11970 SM00644 FD63_11970 FD63_11980 SM00450 Rhodanese Homology Domain FD63_12005 SM00478 endonuclease III FD63_12005 SM00525 FD63_12005 FD63_12015 SM00947 Carbonic anhydrase FD63_12050 SM00382 ATPases associated with a variety of cellular activities FD63_12075 SM00479 FD63_12075 FD63_12095 SM00967 RNA 2'-O ribose methyltransferase substrate binding FD63_12105 SM00316 Ribosomal protein S1-like RNA-binding domain FD63_12105 SM00357 Cold shock protein domain FD63_12105 SM00955 FD63_12105 FD63_12130 SM00530 Helix-turn-helix XRE-family like proteins FD63_12155 SM00347 helix_turn_helix multiple antibiotic resistance protein FD63_12165 SM00434 DNA Topoisomerase IV FD63_12180 SM00710 Parallel beta-helix repeats FD63_12180 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses FD63_12185 SM01172 FD63_12185 FD63_12210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FD63_12220 SM00972 Spore Coat Protein U domain FD63_12235 SM00972 Spore Coat Protein U domain FD63_12260 SM00267 diguanylate cyclase FD63_12290 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FD63_12325 SM00481 DNA polymerase alpha chain like domain FD63_12430 SM00382 ATPases associated with a variety of cellular activities FD63_12470 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_12470 SM00267 diguanylate cyclase FD63_12475 SM00363 S4 RNA-binding domain FD63_12480 SM00487 DEAD-like helicases superfamily FD63_12480 SM00490 helicase superfamily c-terminal domain FD63_12525 SM00342 helix_turn_helix, arabinose operon control protein FD63_12525 SM00478 endonuclease III FD63_12525 SM01009 AlkA N-terminal domain FD63_12545 SM00829 Enoylreductase FD63_12585 SM01092 CO dehydrogenase flavoprotein C-terminal domain FD63_12590 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FD63_12665 SM00645 Papain family cysteine protease FD63_12670 SM00387 Histidine kinase-like ATPases FD63_12700 SM00487 DEAD-like helicases superfamily FD63_12700 SM00490 helicase superfamily c-terminal domain FD63_12700 SM00982 FD63_12700 FD63_12700 SM01058 CarD-like/TRCF domain FD63_12710 SM00073 Histidine Phosphotransfer domain FD63_12710 SM00260 Two component signalling adaptor domain FD63_12710 SM00387 Histidine kinase-like ATPases FD63_12710 SM01231 FD63_12710 FD63_12720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_12720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_12725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_12725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_12730 SM00260 Two component signalling adaptor domain FD63_12735 SM00052 Putative diguanylate phosphodiesterase FD63_12735 SM00448 cheY-homologous receiver domain FD63_12740 SM00138 Methyltransferase, chemotaxis proteins FD63_12745 SM00448 cheY-homologous receiver domain FD63_12760 SM00342 helix_turn_helix, arabinose operon control protein FD63_12780 SM00855 Phosphoglycerate mutase family FD63_12820 SM00248 ankyrin repeats FD63_12855 SM00530 Helix-turn-helix XRE-family like proteins FD63_12915 SM00411 bacterial (prokaryotic) histone like domain FD63_12945 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain FD63_12960 SM00382 ATPases associated with a variety of cellular activities FD63_12990 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. FD63_13025 SM00448 cheY-homologous receiver domain FD63_13025 SM00862 Transcriptional regulatory protein, C terminal FD63_13125 SM00116 Domain in cystathionine beta-synthase and other proteins. FD63_13145 SM00382 ATPases associated with a variety of cellular activities FD63_13190 SM00924 MgtE intracellular N domain FD63_13220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_13220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_13245 SM00732 Likely ribonuclease with RNase H fold. FD63_13270 SM00382 ATPases associated with a variety of cellular activities FD63_13295 SM00422 helix_turn_helix, mercury resistance FD63_13365 SM00387 Histidine kinase-like ATPases FD63_13365 SM00388 His Kinase A (phosphoacceptor) domain FD63_13365 SM00448 cheY-homologous receiver domain FD63_13370 SM00867 YceI-like domain FD63_13380 SM00867 YceI-like domain FD63_13395 SM00267 diguanylate cyclase FD63_13440 SM00116 Domain in cystathionine beta-synthase and other proteins. FD63_13525 SM00822 FD63_13525 FD63_13605 SM00244 prohibitin homologues FD63_13660 SM00812 Alpha-L-fucosidase FD63_13665 SM00636 FD63_13665 FD63_13680 SM00758 FD63_13680 FD63_13680 SM01217 FD63_13680 FD63_13695 SM01149 FD63_13695 FD63_13785 SM00382 ATPases associated with a variety of cellular activities FD63_13785 SM01086 C-terminal, D2-small domain, of ClpB protein FD63_14070 SM01126 FD63_14070 FD63_14085 SM00852 Probable molybdopterin binding domain FD63_14090 SM00530 Helix-turn-helix XRE-family like proteins FD63_14190 SM01002 Alanine dehydrogenase/PNT, C-terminal domain FD63_14190 SM01003 Alanine dehydrogenase/PNT, N-terminal domain FD63_14210 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs FD63_14210 SM00475 5'-3' exonuclease FD63_14225 SM00460 Transglutaminase/protease-like homologues FD63_14360 SM00382 ATPases associated with a variety of cellular activities FD63_14360 SM01086 C-terminal, D2-small domain, of ClpB protein FD63_14425 SM00564 beta-propeller repeat FD63_14475 SM00382 ATPases associated with a variety of cellular activities FD63_14520 SM00881 CoA binding domain FD63_14530 SM00387 Histidine kinase-like ATPases FD63_14530 SM00388 His Kinase A (phosphoacceptor) domain FD63_14535 SM00382 ATPases associated with a variety of cellular activities FD63_14535 SM00448 cheY-homologous receiver domain FD63_14570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_14570 SM00387 Histidine kinase-like ATPases FD63_14570 SM00388 His Kinase A (phosphoacceptor) domain FD63_14575 SM00448 cheY-homologous receiver domain FD63_14575 SM00862 Transcriptional regulatory protein, C terminal FD63_14640 SM00869 Autotransporter beta-domain FD63_14690 SM00354 helix_turn _helix lactose operon repressor FD63_14705 SM00967 RNA 2'-O ribose methyltransferase substrate binding FD63_14720 SM00645 Papain family cysteine protease FD63_14735 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_14735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_14795 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_14795 SM00387 Histidine kinase-like ATPases FD63_14920 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FD63_14940 SM00450 Rhodanese Homology Domain FD63_14945 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FD63_14950 SM00849 Metallo-beta-lactamase superfamily FD63_14965 SM00382 ATPases associated with a variety of cellular activities FD63_14970 SM00903 Flavin reductase like domain FD63_15020 SM00861 Transketolase, pyrimidine binding domain FD63_15035 SM00028 Tetratricopeptide repeats FD63_15035 SM00327 von Willebrand factor (vWF) type A domain FD63_15040 SM00327 von Willebrand factor (vWF) type A domain FD63_15055 SM00382 ATPases associated with a variety of cellular activities FD63_15060 SM00965 Secretin and TonB N terminus short domain FD63_15080 SM00842 Cell division protein FtsA FD63_15105 SM01011 Aminopeptidase P, N-terminal domain FD63_15115 SM00052 Putative diguanylate phosphodiesterase FD63_15115 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FD63_15115 SM00091 PAS domain FD63_15115 SM00267 diguanylate cyclase FD63_15195 SM00421 helix_turn_helix, Lux Regulon FD63_15250 SM00464 Found in ATP-dependent protease La (LON) FD63_15315 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_15340 SM00917 LeuA allosteric (dimerisation) domain FD63_15365 SM01329 FD63_15365 FD63_15370 SM00267 diguanylate cyclase FD63_15415 SM00530 Helix-turn-helix XRE-family like proteins FD63_15420 SM00382 ATPases associated with a variety of cellular activities FD63_15435 SM00530 Helix-turn-helix XRE-family like proteins FD63_15440 SM00919 Malic enzyme, NAD binding domain FD63_15440 SM01274 FD63_15440 FD63_15455 SM00387 Histidine kinase-like ATPases FD63_15455 SM00388 His Kinase A (phosphoacceptor) domain FD63_15455 SM00448 cheY-homologous receiver domain FD63_15465 SM00421 helix_turn_helix, Lux Regulon FD63_15465 SM00448 cheY-homologous receiver domain FD63_15475 SM00387 Histidine kinase-like ATPases FD63_15475 SM00388 His Kinase A (phosphoacceptor) domain FD63_15480 SM00448 cheY-homologous receiver domain FD63_15480 SM00862 Transcriptional regulatory protein, C terminal FD63_15495 SM00822 FD63_15495 FD63_15500 SM00354 helix_turn _helix lactose operon repressor FD63_15515 SM00642 Alpha-amylase domain FD63_15530 SM01154 FD63_15530 FD63_15565 SM00450 Rhodanese Homology Domain FD63_15640 SM00829 Enoylreductase FD63_15650 SM00448 cheY-homologous receiver domain FD63_15650 SM00862 Transcriptional regulatory protein, C terminal FD63_15655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_15655 SM00387 Histidine kinase-like ATPases FD63_15655 SM00388 His Kinase A (phosphoacceptor) domain FD63_15745 SM00354 helix_turn _helix lactose operon repressor FD63_15755 SM00345 helix_turn_helix gluconate operon transcriptional repressor FD63_15755 SM00866 FD63_15755 FD63_15815 SM00387 Histidine kinase-like ATPases FD63_15815 SM00388 His Kinase A (phosphoacceptor) domain FD63_15815 SM00448 cheY-homologous receiver domain FD63_15820 SM00448 cheY-homologous receiver domain FD63_15825 SM00387 Histidine kinase-like ATPases FD63_15825 SM00388 His Kinase A (phosphoacceptor) domain FD63_15835 SM00749 bacterial OsmY and nodulation domain FD63_15845 SM01350 FD63_15845 FD63_15870 SM00563 Phosphate acyltransferases FD63_15910 SM00996 S-adenosyl-L-homocysteine hydrolase FD63_15910 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FD63_15960 SM00957 SecA DEAD-like domain FD63_15960 SM00958 SecA preprotein cross-linking domain FD63_15980 SM00864 Tubulin/FtsZ family, GTPase domain FD63_15980 SM00865 Tubulin/FtsZ family, C-terminal domain FD63_15985 SM00842 Cell division protein FtsA FD63_16085 SM00448 cheY-homologous receiver domain FD63_16085 SM00862 Transcriptional regulatory protein, C terminal FD63_16090 SM00387 Histidine kinase-like ATPases FD63_16090 SM00388 His Kinase A (phosphoacceptor) domain FD63_16125 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain FD63_16190 SM00530 Helix-turn-helix XRE-family like proteins FD63_16200 SM00382 ATPases associated with a variety of cellular activities FD63_16290 SM00345 helix_turn_helix gluconate operon transcriptional repressor FD63_16290 SM00866 FD63_16290 FD63_16350 SM00382 ATPases associated with a variety of cellular activities FD63_16375 SM01211 FD63_16375 FD63_16465 SM00528 Domain in histone-like proteins of HNS family FD63_16480 SM00382 ATPases associated with a variety of cellular activities FD63_16510 SM00882 Coenzyme A transferase FD63_16515 SM00882 Coenzyme A transferase FD63_16550 SM00893 Electron transfer flavoprotein domain FD63_16555 SM00893 Electron transfer flavoprotein domain FD63_16660 SM00382 ATPases associated with a variety of cellular activities FD63_16675 SM00116 Domain in cystathionine beta-synthase and other proteins. FD63_16710 SM00487 DEAD-like helicases superfamily FD63_16710 SM00490 helicase superfamily c-terminal domain FD63_16760 SM00825 Beta-ketoacyl synthase FD63_16795 SM00422 helix_turn_helix, mercury resistance FD63_16830 SM00382 ATPases associated with a variety of cellular activities FD63_16860 SM00382 ATPases associated with a variety of cellular activities FD63_16860 SM00448 cheY-homologous receiver domain FD63_16865 SM00387 Histidine kinase-like ATPases FD63_16885 SM00830 Chorismate mutase type II FD63_16895 SM00382 ATPases associated with a variety of cellular activities FD63_16955 SM00986 Uracil DNA glycosylase superfamily FD63_16955 SM00987 UreE urease accessory protein, C-terminal domain FD63_16980 SM00382 ATPases associated with a variety of cellular activities FD63_16980 SM00930 FD63_16980 FD63_17025 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FD63_17025 SM00091 PAS domain FD63_17025 SM00387 Histidine kinase-like ATPases FD63_17025 SM00388 His Kinase A (phosphoacceptor) domain FD63_17025 SM00448 cheY-homologous receiver domain FD63_17050 SM01005 Alanine racemase, C-terminal domain FD63_17060 SM00344 helix_turn_helix ASNC type FD63_17110 SM00060 Fibronectin type 3 domain FD63_17110 SM00944 Pro-kumamolisin, activation domain FD63_17130 SM00382 ATPases associated with a variety of cellular activities FD63_17145 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. FD63_17150 SM00986 Uracil DNA glycosylase superfamily FD63_17150 SM00987 UreE urease accessory protein, C-terminal domain FD63_17155 SM00729 Elongator protein 3, MiaB family, Radical SAM FD63_17200 SM00822 FD63_17200 FD63_17205 SM00849 Metallo-beta-lactamase superfamily FD63_17220 SM00267 diguanylate cyclase FD63_17230 SM00052 Putative diguanylate phosphodiesterase FD63_17230 SM00091 PAS domain FD63_17230 SM00267 diguanylate cyclase FD63_17300 SM00448 cheY-homologous receiver domain FD63_17300 SM00850 LytTr DNA-binding domain FD63_17340 SM00637 FD63_17340 FD63_17380 SM00342 helix_turn_helix, arabinose operon control protein FD63_17500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_17500 SM00331 Sigma factor PP2C-like phosphatases FD63_17515 SM00867 YceI-like domain FD63_17530 SM00944 Pro-kumamolisin, activation domain FD63_17610 SM00487 DEAD-like helicases superfamily FD63_17610 SM00490 helicase superfamily c-terminal domain FD63_17620 SM00883 Chaperonin 10 Kd subunit FD63_17660 SM00878 Biotin carboxylase C-terminal domain FD63_17690 SM00530 Helix-turn-helix XRE-family like proteins FD63_17715 SM00563 Phosphate acyltransferases FD63_17745 SM00798 AICARFT/IMPCHase bienzyme FD63_17745 SM00851 MGS-like domain FD63_17750 SM01209 FD63_17750 FD63_17750 SM01210 FD63_17750 FD63_17780 SM00563 Phosphate acyltransferases FD63_17835 SM00052 Putative diguanylate phosphodiesterase FD63_17835 SM00267 diguanylate cyclase FD63_17835 SM00448 cheY-homologous receiver domain FD63_17840 SM00387 Histidine kinase-like ATPases FD63_17840 SM00388 His Kinase A (phosphoacceptor) domain FD63_17840 SM00448 cheY-homologous receiver domain FD63_17900 SM00100 Cyclic nucleotide-monophosphate binding domain FD63_17900 SM00419 helix_turn_helix, cAMP Regulatory protein FD63_17950 SM00046 Diacylglycerol kinase catalytic domain (presumed) FD63_17965 SM00271 DnaJ molecular chaperone homology domain FD63_18040 SM00347 helix_turn_helix multiple antibiotic resistance protein FD63_18075 SM00861 Transketolase, pyrimidine binding domain FD63_18080 SM00326 Src homology 3 domains FD63_18105 SM01126 FD63_18105 FD63_18115 SM00487 DEAD-like helicases superfamily FD63_18115 SM00490 helicase superfamily c-terminal domain FD63_18135 SM00267 diguanylate cyclase FD63_18145 SM01120 FD63_18145 FD63_18165 SM00829 Enoylreductase FD63_18175 SM00965 Secretin and TonB N terminus short domain FD63_18200 SM00345 helix_turn_helix gluconate operon transcriptional repressor FD63_18200 SM00895 FD63_18200 FD63_18210 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. FD63_18245 SM00346 helix_turn_helix isocitrate lyase regulation FD63_18260 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain FD63_18315 SM00420 helix_turn_helix, Deoxyribose operon repressor FD63_18315 SM01134 FD63_18315 FD63_18360 SM00563 Phosphate acyltransferases FD63_18425 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FD63_18465 SM01060 FD63_18465 FD63_18490 SM00382 ATPases associated with a variety of cellular activities FD63_18525 SM00849 Metallo-beta-lactamase superfamily FD63_18595 SM00387 Histidine kinase-like ATPases FD63_18600 SM00448 cheY-homologous receiver domain FD63_18600 SM00862 Transcriptional regulatory protein, C terminal FD63_18660 SM00448 cheY-homologous receiver domain FD63_18660 SM00862 Transcriptional regulatory protein, C terminal FD63_18665 SM00387 Histidine kinase-like ATPases FD63_18740 SM00347 helix_turn_helix multiple antibiotic resistance protein FD63_18765 SM00833 Cobalamin synthesis protein cobW C-terminal domain FD63_18805 SM00878 Biotin carboxylase C-terminal domain FD63_18820 SM00881 CoA binding domain FD63_18840 SM00448 cheY-homologous receiver domain FD63_18840 SM00862 Transcriptional regulatory protein, C terminal FD63_18845 SM00387 Histidine kinase-like ATPases FD63_18845 SM00388 His Kinase A (phosphoacceptor) domain FD63_18860 SM00248 ankyrin repeats FD63_18870 SM00825 Beta-ketoacyl synthase FD63_18890 SM00822 FD63_18890 FD63_18920 SM00563 Phosphate acyltransferases FD63_18995 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs FD63_18995 SM00474 3'-5' exonuclease FD63_18995 SM00475 5'-3' exonuclease FD63_18995 SM00482 DNA polymerase A domain FD63_19015 SM01266 FD63_19015 FD63_19040 SM00155 Phospholipase D. Active site motifs. FD63_19070 SM01259 FD63_19070 FD63_19085 SM00470 ParB-like nuclease domain FD63_19165 SM00421 helix_turn_helix, Lux Regulon FD63_19165 SM00448 cheY-homologous receiver domain FD63_19180 SM00091 PAS domain FD63_19180 SM00387 Histidine kinase-like ATPases FD63_19180 SM00388 His Kinase A (phosphoacceptor) domain FD63_19180 SM00448 cheY-homologous receiver domain FD63_19305 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family FD63_19320 SM00354 helix_turn _helix lactose operon repressor FD63_19330 SM00563 Phosphate acyltransferases FD63_19370 SM00633 Glycosyl hydrolase family 10 FD63_19380 SM00633 Glycosyl hydrolase family 10 FD63_19440 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain FD63_19455 SM00354 helix_turn _helix lactose operon repressor FD63_19525 SM00382 ATPases associated with a variety of cellular activities FD63_19540 SM00836 DALR anticodon binding domain FD63_19560 SM00671 Sel1-like repeats. FD63_19575 SM00220 Serine/Threonine protein kinases, catalytic domain FD63_19590 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain FD63_19590 SM01232 FD63_19590 FD63_19605 SM00382 ATPases associated with a variety of cellular activities