locus-tag class description NX08_000010 PF11638 DnaA N-terminal domain NX08_000010 PF08299 Bacterial dnaA protein helix-turn-helix NX08_000010 PF00308 Bacterial dnaA protein NX08_000015 PF02768 DNA polymerase III beta subunit, C-terminal domain NX08_000015 PF00712 DNA polymerase III beta subunit, N-terminal domain NX08_000015 PF02767 DNA polymerase III beta subunit, central domain NX08_000020 PF02463 RecF/RecN/SMC N terminal domain NX08_000025 PF00986 DNA gyrase B subunit, carboxyl terminus NX08_000025 PF18053 DNA gyrase B subunit insert domain NX08_000025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_000025 PF00204 DNA gyrase B NX08_000025 PF01751 Toprim domain NX08_000035 PF01435 Peptidase family M48 NX08_000045 PF03544 Gram-negative bacterial TonB protein C-terminal NX08_000050 PF01618 MotA/TolQ/ExbB proton channel family NX08_000055 PF02472 Biopolymer transport protein ExbD/TolR NX08_000060 PF02472 Biopolymer transport protein ExbD/TolR NX08_000065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NX08_000075 PF13396 Phospholipase_D-nuclease N-terminal NX08_000075 PF13091 PLD-like domain NX08_000080 PF04055 Radical SAM superfamily NX08_000090 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NX08_000105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NX08_000105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NX08_000110 PF03572 Peptidase family S41 NX08_000110 PF13180 PDZ domain NX08_000115 PF01551 Peptidase family M23 NX08_000125 PF04389 Peptidase family M28 NX08_000135 PF00150 Cellulase (glycosyl hydrolase family 5) NX08_000150 PF00150 Cellulase (glycosyl hydrolase family 5) NX08_000155 PF00150 Cellulase (glycosyl hydrolase family 5) NX08_000165 PF08240 Alcohol dehydrogenase GroES-like domain NX08_000165 PF00107 Zinc-binding dehydrogenase NX08_000180 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_000180 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NX08_000185 PF00310 Glutamine amidotransferases class-II NX08_000185 PF01645 Conserved region in glutamate synthase NX08_000185 PF04898 Glutamate synthase central domain NX08_000185 PF01493 GXGXG motif NX08_000205 PF01804 Penicillin amidase NX08_000265 PF09369 Domain of unknown function (DUF1998) NX08_000265 PF00270 DEAD/DEAH box helicase NX08_000265 PF00271 Helicase conserved C-terminal domain NX08_000270 PF03006 Haemolysin-III related NX08_000315 PF00293 NUDIX domain NX08_000320 PF07859 alpha/beta hydrolase fold NX08_000330 PF00085 Thioredoxin NX08_000340 PF00083 Sugar (and other) transporter NX08_000340 PF08946 Osmosensory transporter coiled coil NX08_000375 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NX08_000380 PF00155 Aminotransferase class I and II NX08_000385 PF07715 TonB-dependent Receptor Plug Domain NX08_000385 PF00593 TonB dependent receptor NX08_000405 PF02735 Ku70/Ku80 beta-barrel domain NX08_000410 PF01070 FMN-dependent dehydrogenase NX08_000440 PF12241 Trans-2-enoyl-CoA reductase catalytic region NX08_000440 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NX08_000440 PF07055 Enoyl reductase FAD binding domain NX08_000450 PF00294 pfkB family carbohydrate kinase NX08_000510 PF00128 Alpha amylase, catalytic domain NX08_000510 PF11896 Domain of unknown function (DUF3416) NX08_000515 PF00128 Alpha amylase, catalytic domain NX08_000515 PF16657 Maltogenic Amylase, C-terminal domain NX08_000520 PF00128 Alpha amylase, catalytic domain NX08_000520 PF02806 Alpha amylase, C-terminal all-beta domain NX08_000520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NX08_000530 PF00248 Aldo/keto reductase family NX08_000535 PF00135 Carboxylesterase family NX08_000540 PF07859 alpha/beta hydrolase fold NX08_000540 PF13472 GDSL-like Lipase/Acylhydrolase family NX08_000560 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NX08_000570 PF00356 Bacterial regulatory proteins, lacI family NX08_000575 PF04962 KduI/IolB family NX08_000590 PF00657 GDSL-like Lipase/Acylhydrolase NX08_000600 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NX08_000605 PF01037 Lrp/AsnC ligand binding domain NX08_000610 PF00593 TonB dependent receptor NX08_000610 PF07715 TonB-dependent Receptor Plug Domain NX08_000610 PF07660 Secretin and TonB N terminus short domain NX08_000625 PF01734 Patatin-like phospholipase NX08_000630 PF07687 Peptidase dimerisation domain NX08_000630 PF01546 Peptidase family M20/M25/M40 NX08_000640 PF00005 ABC transporter NX08_000655 PF00571 CBS domain NX08_000655 PF00005 ABC transporter NX08_000660 PF00528 Binding-protein-dependent transport system inner membrane component NX08_000670 PF03781 Sulfatase-modifying factor enzyme 1 NX08_000670 PF12867 DinB superfamily NX08_000710 PF10609 NUBPL iron-transfer P-loop NTPase NX08_000710 PF01883 Iron-sulfur cluster assembly protein NX08_000725 PF13091 PLD-like domain NX08_000730 PF03061 Thioesterase superfamily NX08_000775 PF02673 Bacitracin resistance protein BacA NX08_000780 PF03951 Glutamine synthetase, beta-Grasp domain NX08_000780 PF00120 Glutamine synthetase, catalytic domain NX08_000785 PF00543 Nitrogen regulatory protein P-II NX08_000790 PF00909 Ammonium Transporter Family NX08_000795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_000795 PF00989 PAS fold NX08_000795 PF00512 His Kinase A (phospho-acceptor) domain NX08_000800 PF00158 Sigma-54 interaction domain NX08_000800 PF00072 Response regulator receiver domain NX08_000800 PF02954 Bacterial regulatory protein, Fis family NX08_000805 PF00080 Copper/zinc superoxide dismutase (SODC) NX08_000820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NX08_000830 PF00108 Thiolase, N-terminal domain NX08_000830 PF02803 Thiolase, C-terminal domain NX08_000870 PF00581 Rhodanese-like domain NX08_000875 PF02556 Preprotein translocase subunit SecB NX08_000880 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NX08_000880 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NX08_000890 PF00205 Thiamine pyrophosphate enzyme, central domain NX08_000890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NX08_000890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NX08_000895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_000900 PF02954 Bacterial regulatory protein, Fis family NX08_000900 PF00072 Response regulator receiver domain NX08_000900 PF00158 Sigma-54 interaction domain NX08_000915 PF07690 Major Facilitator Superfamily NX08_000920 PF00588 SpoU rRNA Methylase family NX08_000935 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NX08_000935 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NX08_000940 PF02661 Fic/DOC family NX08_000940 PF13784 Fic/DOC family N-terminal NX08_000945 PF00561 alpha/beta hydrolase fold NX08_000950 PF03692 Putative zinc- or iron-chelating domain NX08_000955 PF00501 AMP-binding enzyme NX08_000960 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NX08_000980 PF07478 D-ala D-ala ligase C-terminus NX08_000980 PF01820 D-ala D-ala ligase N-terminus NX08_000990 PF03109 ABC1 family NX08_000995 PF01596 O-methyltransferase NX08_001000 PF00849 RNA pseudouridylate synthase NX08_001010 PF00472 RF-1 domain NX08_001020 PF01112 Asparaginase NX08_001025 PF01432 Peptidase family M3 NX08_001035 PF12706 Beta-lactamase superfamily domain NX08_001050 PF12833 Helix-turn-helix domain NX08_001055 PF00999 Sodium/hydrogen exchanger family NX08_001060 PF03466 LysR substrate binding domain NX08_001060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_001065 PF01274 Malate synthase NX08_001070 PF00463 Isocitrate lyase family NX08_001075 PF13426 PAS domain NX08_001075 PF00990 Diguanylate cyclase, GGDEF domain NX08_001075 PF00563 EAL domain NX08_001100 PF00364 Biotin-requiring enzyme NX08_001100 PF00289 Biotin carboxylase, N-terminal domain NX08_001100 PF02785 Biotin carboxylase C-terminal domain NX08_001100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NX08_001105 PF01039 Carboxyl transferase domain NX08_001110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NX08_001110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NX08_001110 PF02770 Acyl-CoA dehydrogenase, middle domain NX08_001165 PF07683 Cobalamin synthesis protein cobW C-terminal domain NX08_001165 PF02492 CobW/HypB/UreG, nucleotide-binding domain NX08_001185 PF03969 AFG1-like ATPase NX08_001195 PF01047 MarR family NX08_001200 PF02566 OsmC-like protein NX08_001220 PF00248 Aldo/keto reductase family NX08_001240 PF00849 RNA pseudouridylate synthase NX08_001250 PF04408 Helicase associated domain (HA2) NX08_001250 PF00271 Helicase conserved C-terminal domain NX08_001250 PF00270 DEAD/DEAH box helicase NX08_001250 PF08482 ATP-dependent helicase C-terminal NX08_001255 PF07308 Protein of unknown function (DUF1456) NX08_001260 PF00576 HIUase/Transthyretin family NX08_001270 PF09349 OHCU decarboxylase NX08_001270 PF01014 Uricase NX08_001285 PF00266 Aminotransferase class-V NX08_001290 PF01546 Peptidase family M20/M25/M40 NX08_001290 PF07687 Peptidase dimerisation domain NX08_001315 PF01425 Amidase NX08_001320 PF01156 Inosine-uridine preferring nucleoside hydrolase NX08_001330 PF00860 Permease family NX08_001335 PF00111 2Fe-2S iron-sulfur cluster binding domain NX08_001335 PF00175 Oxidoreductase NAD-binding domain NX08_001340 PF00355 Rieske [2Fe-2S] domain NX08_001345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_001345 PF03466 LysR substrate binding domain NX08_001350 PF01026 TatD related DNase NX08_001385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_001385 PF03466 LysR substrate binding domain NX08_001390 PF07690 Major Facilitator Superfamily NX08_001395 PF00106 short chain dehydrogenase NX08_001405 PF02146 Sir2 family NX08_001410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NX08_001415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NX08_001415 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NX08_001430 PF00551 Formyl transferase NX08_001435 PF00072 Response regulator receiver domain NX08_001435 PF00486 Transcriptional regulatory protein, C terminal NX08_001455 PF02677 Epoxyqueuosine reductase QueH NX08_001460 PF03466 LysR substrate binding domain NX08_001460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_001465 PF03358 NADPH-dependent FMN reductase NX08_001475 PF01717 Cobalamin-independent synthase, Catalytic domain NX08_001475 PF08267 Cobalamin-independent synthase, N-terminal domain NX08_001480 PF03812 2-keto-3-deoxygluconate permease NX08_001495 PF05368 NmrA-like family NX08_001500 PF01638 HxlR-like helix-turn-helix NX08_001530 PF13495 Phage integrase, N-terminal SAM-like domain NX08_001530 PF00589 Phage integrase family NX08_001535 PF00920 Dehydratase family NX08_001550 PF00132 Bacterial transferase hexapeptide (six repeats) NX08_001560 PF07690 Major Facilitator Superfamily NX08_001565 PF11871 Domain of unknown function (DUF3391) NX08_001565 PF01966 HD domain NX08_001585 PF00171 Aldehyde dehydrogenase family NX08_001595 PF01494 FAD binding domain NX08_001605 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NX08_001605 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NX08_001610 PF00230 Major intrinsic protein NX08_001615 PF01266 FAD dependent oxidoreductase NX08_001615 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NX08_001620 PF00455 DeoR C terminal sensor domain NX08_001620 PF08220 DeoR-like helix-turn-helix domain NX08_001625 PF00175 Oxidoreductase NAD-binding domain NX08_001625 PF00111 2Fe-2S iron-sulfur cluster binding domain NX08_001635 PF01144 Coenzyme A transferase NX08_001640 PF01144 Coenzyme A transferase NX08_001645 PF00108 Thiolase, N-terminal domain NX08_001645 PF02803 Thiolase, C-terminal domain NX08_001650 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NX08_001650 PF00775 Dioxygenase NX08_001660 PF10397 Adenylosuccinate lyase C-terminus NX08_001660 PF00206 Lyase NX08_001665 PF12146 Serine aminopeptidase, S33 NX08_001670 PF02627 Carboxymuconolactone decarboxylase family NX08_001675 PF09339 IclR helix-turn-helix domain NX08_001675 PF01614 Bacterial transcriptional regulator NX08_001685 PF07859 alpha/beta hydrolase fold NX08_001690 PF13932 GidA associated domain NX08_001690 PF01134 Glucose inhibited division protein A NX08_001700 PF00291 Pyridoxal-phosphate dependent enzyme NX08_001725 PF13649 Methyltransferase domain NX08_001735 PF12697 Alpha/beta hydrolase family NX08_001745 PF00155 Aminotransferase class I and II NX08_001750 PF06968 Biotin and Thiamin Synthesis associated domain NX08_001750 PF04055 Radical SAM superfamily NX08_001790 PF01040 UbiA prenyltransferase family NX08_001810 PF05819 NolX protein NX08_001850 PF01313 Bacterial export proteins, family 3 NX08_001855 PF00813 FliP family NX08_001870 PF00771 FHIPEP family NX08_001875 PF01312 FlhB HrpN YscU SpaS Family NX08_001890 PF01514 Secretory protein of YscJ/FliF family NX08_001905 PF18269 T3SS EscN ATPase C-terminal domain NX08_001905 PF02874 ATP synthase alpha/beta family, beta-barrel domain NX08_001905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NX08_001935 PF01464 Transglycosylase SLT domain NX08_001950 PF12794 Mechanosensitive ion channel inner membrane domain 1 NX08_001950 PF00924 Mechanosensitive ion channel NX08_001950 PF12795 Mechanosensitive ion channel porin domain NX08_001955 PF00884 Sulfatase NX08_001965 PF03109 ABC1 family NX08_001970 PF05661 Protein of unknown function (DUF808) NX08_001980 PF00072 Response regulator receiver domain NX08_001980 PF00990 Diguanylate cyclase, GGDEF domain NX08_001985 PF08323 Starch synthase catalytic domain NX08_001985 PF00534 Glycosyl transferases group 1 NX08_001990 PF00128 Alpha amylase, catalytic domain NX08_001990 PF02806 Alpha amylase, C-terminal all-beta domain NX08_001990 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NX08_001995 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NX08_001995 PF00128 Alpha amylase, catalytic domain NX08_001995 PF11941 Domain of unknown function (DUF3459) NX08_002000 PF02446 4-alpha-glucanotransferase NX08_002005 PF00128 Alpha amylase, catalytic domain NX08_002015 PF00128 Alpha amylase, catalytic domain NX08_002015 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NX08_002035 PF06903 VirK protein NX08_002065 PF02817 e3 binding domain NX08_002065 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NX08_002065 PF00364 Biotin-requiring enzyme NX08_002075 PF02780 Transketolase, C-terminal domain NX08_002075 PF02779 Transketolase, pyrimidine binding domain NX08_002080 PF00676 Dehydrogenase E1 component NX08_002095 PF03301 Tryptophan 2,3-dioxygenase NX08_002105 PF00854 POT family NX08_002115 PF01047 MarR family NX08_002120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NX08_002125 PF04209 homogentisate 1,2-dioxygenase NX08_002165 PF03334 Na+/H+ antiporter subunit NX08_002170 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NX08_002180 PF00361 Proton-conducting membrane transporter NX08_002185 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NX08_002190 PF00361 Proton-conducting membrane transporter NX08_002190 PF13244 Domain of unknown function (DUF4040) NX08_002190 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NX08_002190 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NX08_002255 PF01259 SAICAR synthetase NX08_002260 PF00226 DnaJ domain NX08_002260 PF05099 Tellurite resistance protein TerB NX08_002270 PF00834 Ribulose-phosphate 3 epimerase family NX08_002275 PF00583 Acetyltransferase (GNAT) family NX08_002280 PF00781 Diacylglycerol kinase catalytic domain NX08_002290 PF00425 chorismate binding enzyme NX08_002290 PF04715 Anthranilate synthase component I, N terminal region NX08_002305 PF00117 Glutamine amidotransferase class-I NX08_002315 PF00591 Glycosyl transferase family, a/b domain NX08_002315 PF02885 Glycosyl transferase family, helical bundle domain NX08_002320 PF00218 Indole-3-glycerol phosphate synthase NX08_002330 PF00325 Bacterial regulatory proteins, crp family NX08_002330 PF00027 Cyclic nucleotide-binding domain NX08_002335 PF02675 S-adenosylmethionine decarboxylase NX08_002340 PF00893 Small Multidrug Resistance protein NX08_002345 PF03232 Ubiquinone biosynthesis protein COQ7 NX08_002350 PF00572 Ribosomal protein L13 NX08_002355 PF00380 Ribosomal protein S9/S16 NX08_002370 PF00293 NUDIX domain NX08_002380 PF00210 Ferritin-like domain NX08_002385 PF00072 Response regulator receiver domain NX08_002385 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NX08_002385 PF01627 Hpt domain NX08_002385 PF00672 HAMP domain NX08_002385 PF00512 His Kinase A (phospho-acceptor) domain NX08_002385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_002390 PF00486 Transcriptional regulatory protein, C terminal NX08_002390 PF00072 Response regulator receiver domain NX08_002410 PF01521 Iron-sulphur cluster biosynthesis NX08_002420 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NX08_002420 PF09297 NADH pyrophosphatase zinc ribbon domain NX08_002420 PF00293 NUDIX domain NX08_002425 PF03186 CobD/Cbib protein NX08_002425 PF17113 Regulatory signalling modulator protein AmpE NX08_002445 PF07690 Major Facilitator Superfamily NX08_002455 PF07690 Major Facilitator Superfamily NX08_002460 PF12805 FUSC-like inner membrane protein yccS NX08_002465 PF02844 Phosphoribosylglycinamide synthetase, N domain NX08_002465 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NX08_002465 PF02843 Phosphoribosylglycinamide synthetase, C domain NX08_002475 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system NX08_002480 PF02142 MGS-like domain NX08_002480 PF01808 AICARFT/IMPCHase bienzyme NX08_002505 PF02954 Bacterial regulatory protein, Fis family NX08_002520 PF01381 Helix-turn-helix NX08_002555 PF02785 Biotin carboxylase C-terminal domain NX08_002555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NX08_002555 PF00289 Biotin carboxylase, N-terminal domain NX08_002565 PF00364 Biotin-requiring enzyme NX08_002570 PF01220 Dehydroquinase class II NX08_002575 PF11412 Disulphide bond corrector protein DsbC NX08_002575 PF02683 Cytochrome C biogenesis protein transmembrane region NX08_002580 PF03091 CutA1 divalent ion tolerance protein NX08_002590 PF04231 Endonuclease I NX08_002600 PF00166 Chaperonin 10 Kd subunit NX08_002605 PF00118 TCP-1/cpn60 chaperonin family NX08_002630 PF00793 DAHP synthetase I family NX08_002650 PF08450 SMP-30/Gluconolactonase/LRE-like region NX08_002660 PF08335 GlnD PII-uridylyltransferase NX08_002660 PF03710 Glutamate-ammonia ligase adenylyltransferase NX08_002700 PF00881 Nitroreductase family NX08_002705 PF04264 YceI-like domain NX08_002740 PF16957 Malonate decarboxylase, alpha subunit, transporter NX08_002745 PF06857 Malonate decarboxylase delta subunit (MdcD) NX08_002750 PF01039 Carboxyl transferase domain NX08_002760 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG NX08_002765 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase NX08_002770 PF00550 Phosphopantetheine attachment site NX08_002770 PF00109 Beta-ketoacyl synthase, N-terminal domain NX08_002770 PF16197 Ketoacyl-synthetase C-terminal extension NX08_002770 PF00698 Acyl transferase domain NX08_002770 PF08659 KR domain NX08_002770 PF02801 Beta-ketoacyl synthase, C-terminal domain NX08_002780 PF07729 FCD domain NX08_002780 PF00392 Bacterial regulatory proteins, gntR family NX08_002785 PF13419 Haloacid dehalogenase-like hydrolase NX08_002815 PF07745 Glycosyl hydrolase family 53 NX08_002825 PF17831 Pyruvate dehydrogenase E1 component middle domain NX08_002825 PF00456 Transketolase, thiamine diphosphate binding domain NX08_002835 PF14579 Helix-hairpin-helix motif NX08_002835 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NX08_002835 PF02811 PHP domain NX08_002835 PF07733 Bacterial DNA polymerase III alpha NTPase domain NX08_002835 PF00929 Exonuclease NX08_002900 PF00106 short chain dehydrogenase NX08_002905 PF13409 Glutathione S-transferase, N-terminal domain NX08_002945 PF07759 Protein of unknown function (DUF1615) NX08_002950 PF03707 Bacterial signalling protein N terminal repeat NX08_002950 PF00563 EAL domain NX08_002950 PF00990 Diguanylate cyclase, GGDEF domain NX08_002980 PF00892 EamA-like transporter family NX08_002985 PF00497 Bacterial extracellular solute-binding proteins, family 3 NX08_003000 PF03330 Lytic transglycolase NX08_003010 PF00324 Amino acid permease NX08_003020 PF01544 CorA-like Mg2+ transporter protein NX08_003040 PF01204 Trehalase NX08_003050 PF06827 Zinc finger found in FPG and IleRS NX08_003050 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NX08_003050 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NX08_003075 PF08448 PAS fold NX08_003075 PF08447 PAS fold NX08_003075 PF00563 EAL domain NX08_003075 PF00990 Diguanylate cyclase, GGDEF domain NX08_003085 PF00553 Cellulose binding domain NX08_003085 PF00150 Cellulase (glycosyl hydrolase family 5) NX08_003090 PF01740 STAS domain NX08_003090 PF00916 Sulfate permease family NX08_003115 PF13632 Glycosyl transferase family group 2 NX08_003125 PF06580 Histidine kinase NX08_003125 PF07694 5TMR of 5TMR-LYT NX08_003130 PF00072 Response regulator receiver domain NX08_003130 PF04397 LytTr DNA-binding domain NX08_003135 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NX08_003135 PF03900 Porphobilinogen deaminase, C-terminal domain NX08_003165 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NX08_003165 PF00326 Prolyl oligopeptidase family NX08_003175 PF00155 Aminotransferase class I and II NX08_003185 PF00326 Prolyl oligopeptidase family NX08_003185 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NX08_003190 PF04304 Protein of unknown function (DUF454) NX08_003200 PF01678 Diaminopimelate epimerase NX08_003210 PF02899 Phage integrase, N-terminal SAM-like domain NX08_003210 PF00589 Phage integrase family NX08_003220 PF00227 Proteasome subunit NX08_003225 PF00004 ATPase family associated with various cellular activities (AAA) NX08_003225 PF10431 C-terminal, D2-small domain, of ClpB protein NX08_003225 PF07724 AAA domain (Cdc48 subfamily) NX08_003235 PF13673 Acetyltransferase (GNAT) domain NX08_003240 PF13533 Biotin-lipoyl like NX08_003250 PF01209 ubiE/COQ5 methyltransferase family NX08_003260 PF00990 Diguanylate cyclase, GGDEF domain NX08_003260 PF00563 EAL domain NX08_003260 PF03707 Bacterial signalling protein N terminal repeat NX08_003265 PF11838 ERAP1-like C-terminal domain NX08_003265 PF01433 Peptidase family M1 domain NX08_003300 PF01925 Sulfite exporter TauE/SafE NX08_003305 PF00171 Aldehyde dehydrogenase family NX08_003310 PF00733 Asparagine synthase NX08_003310 PF13537 Glutamine amidotransferase domain NX08_003315 PF12804 MobA-like NTP transferase domain NX08_003315 PF00132 Bacterial transferase hexapeptide (six repeats) NX08_003325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NX08_003325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NX08_003355 PF00294 pfkB family carbohydrate kinase NX08_003365 PF04085 rod shape-determining protein MreC NX08_003375 PF00905 Penicillin binding protein transpeptidase domain NX08_003375 PF03717 Penicillin-binding Protein dimerisation domain NX08_003380 PF01098 Cell cycle protein NX08_003395 PF00041 Fibronectin type III domain NX08_003395 PF01341 Glycosyl hydrolases family 6 NX08_003395 PF00553 Cellulose binding domain NX08_003425 PF00295 Glycosyl hydrolases family 28 NX08_003430 PF13406 Transglycosylase SLT domain NX08_003435 PF03330 Lytic transglycolase NX08_003435 PF05036 Sporulation related domain NX08_003440 PF07943 Penicillin-binding protein 5, C-terminal domain NX08_003440 PF00768 D-alanyl-D-alanine carboxypeptidase NX08_003450 PF04359 Protein of unknown function (DUF493) NX08_003455 PF03099 Biotin/lipoate A/B protein ligase family NX08_003460 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NX08_003460 PF04055 Radical SAM superfamily NX08_003465 PF03572 Peptidase family S41 NX08_003465 PF00595 PDZ domain NX08_003465 PF11818 C-terminal domain of tail specific protease (DUF3340) NX08_003465 PF17804 Tail specific protease N-terminal domain NX08_003475 PF00293 NUDIX domain NX08_003475 PF01467 Cytidylyltransferase-like NX08_003510 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NX08_003510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NX08_003520 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NX08_003520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NX08_003525 PF04972 BON domain NX08_003530 PF08446 PAS fold NX08_003530 PF00360 Phytochrome region NX08_003530 PF00512 His Kinase A (phospho-acceptor) domain NX08_003530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_003530 PF01590 GAF domain NX08_003535 PF00072 Response regulator receiver domain NX08_003540 PF00512 His Kinase A (phospho-acceptor) domain NX08_003540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_003545 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NX08_003580 PF02837 Glycosyl hydrolases family 2, sugar binding domain NX08_003580 PF16355 Domain of unknown function (DUF4982) NX08_003580 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NX08_003580 PF00703 Glycosyl hydrolases family 2 NX08_003580 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 NX08_003600 PF07690 Major Facilitator Superfamily NX08_003605 PF00356 Bacterial regulatory proteins, lacI family NX08_003610 PF01380 SIS domain NX08_003615 PF01979 Amidohydrolase family NX08_003630 PF00535 Glycosyl transferase family 2 NX08_003635 PF01522 Polysaccharide deacetylase NX08_003635 PF14883 Hypothetical glycosyl hydrolase family 13 NX08_003650 PF12627 Probable RNA and SrmB- binding site of polymerase A NX08_003650 PF01743 Poly A polymerase head domain NX08_003650 PF01966 HD domain NX08_003655 PF01464 Transglycosylase SLT domain NX08_003655 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NX08_003660 PF07715 TonB-dependent Receptor Plug Domain NX08_003660 PF00593 TonB dependent receptor NX08_003705 PF10458 Valyl tRNA synthetase tRNA binding arm NX08_003705 PF00133 tRNA synthetases class I (I, L, M and V) NX08_003705 PF08264 Anticodon-binding domain of tRNA NX08_003720 PF02789 Cytosol aminopeptidase family, N-terminal domain NX08_003720 PF00883 Cytosol aminopeptidase family, catalytic domain NX08_003730 PF03739 Lipopolysaccharide export system permease LptF/LptG NX08_003740 PF02899 Phage integrase, N-terminal SAM-like domain NX08_003740 PF00589 Phage integrase family NX08_003745 PF13098 Thioredoxin-like domain NX08_003745 PF10411 Disulfide bond isomerase protein N-terminus NX08_003760 PF02769 AIR synthase related protein, C-terminal domain NX08_003760 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NX08_003760 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NX08_003770 PF05662 Coiled stalk of trimeric autotransporter adhesin NX08_003770 PF05658 Head domain of trimeric autotransporter adhesin NX08_003770 PF13018 Extended Signal Peptide of Type V secretion system NX08_003770 PF03895 YadA-like membrane anchor domain NX08_003775 PF00082 Subtilase family NX08_003785 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NX08_003785 PF00437 Type II/IV secretion system protein NX08_003795 PF00482 Type II secretion system (T2SS), protein F NX08_003800 PF08334 Type II secretion system (T2SS), protein G NX08_003805 PF12019 Type II transport protein GspH NX08_003810 PF07963 Prokaryotic N-terminal methylation motif NX08_003820 PF03934 Type II secretion system (T2SS), protein K NX08_003825 PF05137 Fimbrial assembly protein (PilN) NX08_003830 PF10741 Type II secretion system (T2SS), protein M subtype b NX08_003840 PF03958 Bacterial type II/III secretion system short domain NX08_003840 PF00263 Bacterial type II and III secretion system protein NX08_003850 PF07702 UTRA domain NX08_003850 PF00392 Bacterial regulatory proteins, gntR family NX08_003860 PF00593 TonB dependent receptor NX08_003860 PF07715 TonB-dependent Receptor Plug Domain NX08_003905 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NX08_003905 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NX08_003925 PF03960 ArsC family NX08_003935 PF01327 Polypeptide deformylase NX08_003940 PF00005 ABC transporter NX08_003940 PF12848 ABC transporter NX08_003965 PF00464 Serine hydroxymethyltransferase NX08_003970 PF03477 ATP cone domain NX08_003980 PF01872 RibD C-terminal domain NX08_003980 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NX08_003990 PF00677 Lumazine binding domain NX08_003995 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NX08_003995 PF00925 GTP cyclohydrolase II NX08_004000 PF00885 6,7-dimethyl-8-ribityllumazine synthase NX08_004005 PF01029 NusB family NX08_004010 PF02769 AIR synthase related protein, C-terminal domain NX08_004010 PF00586 AIR synthase related protein, N-terminal domain NX08_004050 PF03814 Potassium-transporting ATPase A subunit NX08_004060 PF02669 K+-transporting ATPase, c chain NX08_004065 PF02702 Osmosensitive K+ channel His kinase sensor domain NX08_004065 PF00512 His Kinase A (phospho-acceptor) domain NX08_004065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_004065 PF13492 GAF domain NX08_004065 PF13493 Domain of unknown function (DUF4118) NX08_004070 PF00072 Response regulator receiver domain NX08_004070 PF00486 Transcriptional regulatory protein, C terminal NX08_004075 PF02913 FAD linked oxidases, C-terminal domain NX08_004075 PF01565 FAD binding domain NX08_004080 PF04307 LexA-binding, inner membrane-associated putative hydrolase NX08_004085 PF02021 Uncharacterised protein family UPF0102 NX08_004095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NX08_004125 PF02381 MraZ protein, putative antitoxin-like NX08_004130 PF01795 MraW methylase family NX08_004135 PF04999 Cell division protein FtsL NX08_004140 PF03717 Penicillin-binding Protein dimerisation domain NX08_004140 PF00905 Penicillin binding protein transpeptidase domain NX08_004145 PF01225 Mur ligase family, catalytic domain NX08_004145 PF02875 Mur ligase family, glutamate ligase domain NX08_004145 PF08245 Mur ligase middle domain NX08_004150 PF08245 Mur ligase middle domain NX08_004150 PF01225 Mur ligase family, catalytic domain NX08_004150 PF02875 Mur ligase family, glutamate ligase domain NX08_004155 PF00953 Glycosyl transferase family 4 NX08_004160 PF01098 Cell cycle protein NX08_004165 PF03033 Glycosyltransferase family 28 N-terminal domain NX08_004165 PF04101 Glycosyltransferase family 28 C-terminal domain NX08_004170 PF01225 Mur ligase family, catalytic domain NX08_004170 PF08245 Mur ligase middle domain NX08_004170 PF02875 Mur ligase family, glutamate ligase domain NX08_004175 PF01820 D-ala D-ala ligase N-terminus NX08_004175 PF07478 D-ala D-ala ligase C-terminus NX08_004180 PF08478 POTRA domain, FtsQ-type NX08_004180 PF03799 Cell division protein FtsQ NX08_004185 PF02491 SHS2 domain inserted in FTSA NX08_004190 PF00091 Tubulin/FtsZ family, GTPase domain NX08_004190 PF12327 FtsZ family, C-terminal domain NX08_004195 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NX08_004205 PF01551 Peptidase family M23 NX08_004205 PF08525 Opacity-associated protein A N-terminal motif NX08_004205 PF01476 LysM domain NX08_004210 PF07517 SecA DEAD-like domain NX08_004210 PF02810 SEC-C motif NX08_004210 PF01043 SecA preprotein cross-linking domain NX08_004210 PF07516 SecA Wing and Scaffold domain NX08_004215 PF00293 NUDIX domain NX08_004230 PF02219 Methylenetetrahydrofolate reductase NX08_004240 PF00698 Acyl transferase domain NX08_004240 PF08659 KR domain NX08_004240 PF08240 Alcohol dehydrogenase GroES-like domain NX08_004240 PF14765 Polyketide synthase dehydratase NX08_004240 PF00107 Zinc-binding dehydrogenase NX08_004240 PF00550 Phosphopantetheine attachment site NX08_004240 PF00109 Beta-ketoacyl synthase, N-terminal domain NX08_004240 PF02801 Beta-ketoacyl synthase, C-terminal domain NX08_004240 PF16197 Ketoacyl-synthetase C-terminal extension NX08_004245 PF00082 Subtilase family NX08_004245 PF09286 Pro-kumamolisin, activation domain NX08_004265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NX08_004300 PF05221 S-adenosyl-L-homocysteine hydrolase NX08_004300 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NX08_004310 PF00311 Phosphoenolpyruvate carboxylase NX08_004335 PF00328 Histidine phosphatase superfamily (branch 2) NX08_004340 PF02773 S-adenosylmethionine synthetase, C-terminal domain NX08_004340 PF02772 S-adenosylmethionine synthetase, central domain NX08_004340 PF00438 S-adenosylmethionine synthetase, N-terminal domain NX08_004350 PF13649 Methyltransferase domain NX08_004355 PF01207 Dihydrouridine synthase (Dus) NX08_004365 PF00294 pfkB family carbohydrate kinase NX08_004365 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NX08_004370 PF07670 Nucleoside recognition NX08_004370 PF07662 Na+ dependent nucleoside transporter C-terminus NX08_004370 PF01773 Na+ dependent nucleoside transporter N-terminus NX08_004375 PF00248 Aldo/keto reductase family NX08_004390 PF07715 TonB-dependent Receptor Plug Domain NX08_004390 PF00593 TonB dependent receptor NX08_004410 PF00528 Binding-protein-dependent transport system inner membrane component NX08_004415 PF00005 ABC transporter NX08_004425 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NX08_004435 PF00005 ABC transporter NX08_004440 PF13472 GDSL-like Lipase/Acylhydrolase family NX08_004445 PF00486 Transcriptional regulatory protein, C terminal NX08_004445 PF00072 Response regulator receiver domain NX08_004465 PF01219 Prokaryotic diacylglycerol kinase NX08_004485 PF01790 Prolipoprotein diacylglyceryl transferase NX08_004490 PF00303 Thymidylate synthase NX08_004495 PF00186 Dihydrofolate reductase NX08_004500 PF00149 Calcineurin-like phosphoesterase NX08_004505 PF04379 ApaG domain NX08_004510 PF00398 Ribosomal RNA adenine dimethylase NX08_004520 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NX08_004525 PF00639 PPIC-type PPIASE domain NX08_004525 PF09312 SurA N-terminal domain NX08_004530 PF04453 LPS transport system D NX08_004530 PF03968 OstA-like protein NX08_004535 PF00850 Histone deacetylase domain NX08_004540 PF01923 Cobalamin adenosyltransferase NX08_004555 PF01494 FAD binding domain NX08_004560 PF01494 FAD binding domain NX08_004585 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit NX08_004585 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NX08_004590 PF03466 LysR substrate binding domain NX08_004590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_004600 PF00501 AMP-binding enzyme NX08_004600 PF13193 AMP-binding enzyme C-terminal domain NX08_004610 PF00378 Enoyl-CoA hydratase/isomerase NX08_004630 PF08450 SMP-30/Gluconolactonase/LRE-like region NX08_004635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NX08_004635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NX08_004640 PF01728 FtsJ-like methyltransferase NX08_004640 PF18125 RlmM ferredoxin-like domain NX08_004655 PF00892 EamA-like transporter family NX08_004665 PF00749 tRNA synthetases class I (E and Q), catalytic domain NX08_004665 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NX08_004680 PF00072 Response regulator receiver domain NX08_004680 PF00990 Diguanylate cyclase, GGDEF domain NX08_004685 PF00672 HAMP domain NX08_004685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_004685 PF00512 His Kinase A (phospho-acceptor) domain NX08_004685 PF01627 Hpt domain NX08_004685 PF00072 Response regulator receiver domain NX08_004685 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NX08_004690 PF00072 Response regulator receiver domain NX08_004690 PF00196 Bacterial regulatory proteins, luxR family NX08_004700 PF01625 Peptide methionine sulfoxide reductase NX08_004710 PF00923 Transaldolase/Fructose-6-phosphate aldolase NX08_004715 PF14760 Rnk N-terminus NX08_004715 PF01272 Transcription elongation factor, GreA/GreB, C-term NX08_004720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_004720 PF03466 LysR substrate binding domain NX08_004725 PF13192 Thioredoxin domain NX08_004725 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_004730 PF10417 C-terminal domain of 1-Cys peroxiredoxin NX08_004730 PF00578 AhpC/TSA family NX08_004735 PF17827 PrmC N-terminal domain NX08_004735 PF05175 Methyltransferase small domain NX08_004765 PF00561 alpha/beta hydrolase fold NX08_004775 PF00293 NUDIX domain NX08_004780 PF00476 DNA polymerase family A NX08_004780 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NX08_004780 PF01612 3'-5' exonuclease NX08_004780 PF01367 5'-3' exonuclease, C-terminal SAM fold NX08_004800 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NX08_004800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NX08_004825 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NX08_004845 PF01063 Amino-transferase class IV NX08_004850 PF00082 Subtilase family NX08_004850 PF04151 Bacterial pre-peptidase C-terminal domain NX08_004855 PF04151 Bacterial pre-peptidase C-terminal domain NX08_004855 PF00082 Subtilase family NX08_004860 PF04151 Bacterial pre-peptidase C-terminal domain NX08_004860 PF00082 Subtilase family NX08_004865 PF04073 Aminoacyl-tRNA editing domain NX08_004885 PF03358 NADPH-dependent FMN reductase NX08_004890 PF03631 Virulence factor BrkB NX08_004895 PF08534 Redoxin NX08_004900 PF00708 Acylphosphatase NX08_004910 PF03976 Polyphosphate kinase 2 (PPK2) NX08_004915 PF00994 Probable molybdopterin binding domain NX08_004925 PF03462 PCRF domain NX08_004925 PF00472 RF-1 domain NX08_004930 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NX08_004930 PF01488 Shikimate / quinate 5-dehydrogenase NX08_004930 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NX08_004940 PF03550 Outer membrane lipoprotein LolB NX08_004945 PF00288 GHMP kinases N terminal domain NX08_004945 PF08544 GHMP kinases C terminal NX08_004955 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NX08_004955 PF14572 Phosphoribosyl synthetase-associated domain NX08_004960 PF01386 Ribosomal L25p family NX08_004960 PF14693 Ribosomal protein TL5, C-terminal domain NX08_004965 PF01195 Peptidyl-tRNA hydrolase NX08_004970 PF01926 50S ribosome-binding GTPase NX08_004970 PF06071 Protein of unknown function (DUF933) NX08_004990 PF00009 Elongation factor Tu GTP binding domain NX08_004990 PF03144 Elongation factor Tu domain 2 NX08_004990 PF03143 Elongation factor Tu C-terminal domain NX08_005000 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NX08_005005 PF00467 KOW motif NX08_005005 PF02357 Transcription termination factor nusG NX08_005010 PF00298 Ribosomal protein L11, RNA binding domain NX08_005010 PF03946 Ribosomal protein L11, N-terminal domain NX08_005015 PF00687 Ribosomal protein L1p/L10e family NX08_005020 PF00466 Ribosomal protein L10 NX08_005025 PF16320 Ribosomal protein L7/L12 dimerisation domain NX08_005025 PF00542 Ribosomal protein L7/L12 C-terminal domain NX08_005030 PF04561 RNA polymerase Rpb2, domain 2 NX08_005030 PF10385 RNA polymerase beta subunit external 1 domain NX08_005030 PF04560 RNA polymerase Rpb2, domain 7 NX08_005030 PF04563 RNA polymerase beta subunit NX08_005030 PF04565 RNA polymerase Rpb2, domain 3 NX08_005030 PF00562 RNA polymerase Rpb2, domain 6 NX08_005035 PF00623 RNA polymerase Rpb1, domain 2 NX08_005035 PF04997 RNA polymerase Rpb1, domain 1 NX08_005035 PF04983 RNA polymerase Rpb1, domain 3 NX08_005035 PF05000 RNA polymerase Rpb1, domain 4 NX08_005035 PF04998 RNA polymerase Rpb1, domain 5 NX08_005040 PF00164 Ribosomal protein S12/S23 NX08_005045 PF00177 Ribosomal protein S7p/S5e NX08_005050 PF03144 Elongation factor Tu domain 2 NX08_005050 PF14492 Elongation Factor G, domain II NX08_005050 PF00679 Elongation factor G C-terminus NX08_005050 PF03764 Elongation factor G, domain IV NX08_005050 PF00009 Elongation factor Tu GTP binding domain NX08_005055 PF03143 Elongation factor Tu C-terminal domain NX08_005055 PF03144 Elongation factor Tu domain 2 NX08_005055 PF00009 Elongation factor Tu GTP binding domain NX08_005070 PF00338 Ribosomal protein S10p/S20e NX08_005075 PF00297 Ribosomal protein L3 NX08_005080 PF00573 Ribosomal protein L4/L1 family NX08_005085 PF00276 Ribosomal protein L23 NX08_005090 PF03947 Ribosomal Proteins L2, C-terminal domain NX08_005090 PF00181 Ribosomal Proteins L2, RNA binding domain NX08_005095 PF00203 Ribosomal protein S19 NX08_005100 PF00237 Ribosomal protein L22p/L17e NX08_005105 PF00189 Ribosomal protein S3, C-terminal domain NX08_005105 PF07650 KH domain NX08_005110 PF00252 Ribosomal protein L16p/L10e NX08_005115 PF00831 Ribosomal L29 protein NX08_005120 PF00366 Ribosomal protein S17 NX08_005125 PF00238 Ribosomal protein L14p/L23e NX08_005130 PF00467 KOW motif NX08_005130 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NX08_005135 PF00673 ribosomal L5P family C-terminus NX08_005135 PF00281 Ribosomal protein L5 NX08_005140 PF00253 Ribosomal protein S14p/S29e NX08_005145 PF00410 Ribosomal protein S8 NX08_005150 PF00347 Ribosomal protein L6 NX08_005155 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NX08_005160 PF03719 Ribosomal protein S5, C-terminal domain NX08_005160 PF00333 Ribosomal protein S5, N-terminal domain NX08_005165 PF00327 Ribosomal protein L30p/L7e NX08_005170 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NX08_005175 PF00344 SecY translocase NX08_005180 PF00416 Ribosomal protein S13/S18 NX08_005185 PF00411 Ribosomal protein S11 NX08_005190 PF00163 Ribosomal protein S4/S9 N-terminal domain NX08_005190 PF01479 S4 domain NX08_005195 PF01000 RNA polymerase Rpb3/RpoA insert domain NX08_005195 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NX08_005195 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NX08_005200 PF01196 Ribosomal protein L17 NX08_005205 PF02600 Disulfide bond formation protein DsbB NX08_005220 PF01474 Class-II DAHP synthetase family NX08_005235 PF01425 Amidase NX08_005250 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NX08_005255 PF00056 lactate/malate dehydrogenase, NAD binding domain NX08_005255 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NX08_005260 PF00043 Glutathione S-transferase, C-terminal domain NX08_005260 PF02798 Glutathione S-transferase, N-terminal domain NX08_005280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NX08_005280 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_005285 PF08240 Alcohol dehydrogenase GroES-like domain NX08_005285 PF00107 Zinc-binding dehydrogenase NX08_005290 PF00691 OmpA family NX08_005290 PF00223 Photosystem I psaA/psaB protein NX08_005300 PF00849 RNA pseudouridylate synthase NX08_005310 PF00155 Aminotransferase class I and II NX08_005320 PF00528 Binding-protein-dependent transport system inner membrane component NX08_005325 PF00528 Binding-protein-dependent transport system inner membrane component NX08_005330 PF17850 CysA C-terminal regulatory domain NX08_005330 PF00005 ABC transporter NX08_005330 PF12857 TOBE-like domain NX08_005340 PF00107 Zinc-binding dehydrogenase NX08_005340 PF08240 Alcohol dehydrogenase GroES-like domain NX08_005350 PF05506 Domain of unknown function (DUF756) NX08_005350 PF04185 Phosphoesterase family NX08_005360 PF00300 Histidine phosphatase superfamily (branch 1) NX08_005370 PF02875 Mur ligase family, glutamate ligase domain NX08_005370 PF08245 Mur ligase middle domain NX08_005385 PF00156 Phosphoribosyl transferase domain NX08_005390 PF04305 Protein of unknown function (DUF455) NX08_005405 PF00149 Calcineurin-like phosphoesterase NX08_005410 PF01569 PAP2 superfamily NX08_005415 PF00534 Glycosyl transferases group 1 NX08_005415 PF13439 Glycosyltransferase Family 4 NX08_005420 PF02541 Ppx/GppA phosphatase family NX08_005425 PF13089 Polyphosphate kinase N-terminal domain NX08_005425 PF17941 Polyphosphate kinase C-terminal domain 1 NX08_005425 PF13090 Polyphosphate kinase C-terminal domain 2 NX08_005425 PF02503 Polyphosphate kinase middle domain NX08_005430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_005430 PF00512 His Kinase A (phospho-acceptor) domain NX08_005430 PF00989 PAS fold NX08_005430 PF11808 Phosphate regulon sensor protein PhoR NX08_005435 PF00072 Response regulator receiver domain NX08_005435 PF00486 Transcriptional regulatory protein, C terminal NX08_005440 PF13181 Tetratricopeptide repeat NX08_005440 PF01435 Peptidase family M48 NX08_005445 PF00462 Glutaredoxin NX08_005460 PF18324 Hypothetical protein TT1725 NX08_005460 PF00180 Isocitrate/isopropylmalate dehydrogenase NX08_005495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_005495 PF00512 His Kinase A (phospho-acceptor) domain NX08_005505 PF05697 Bacterial trigger factor protein (TF) NX08_005505 PF05698 Bacterial trigger factor protein (TF) C-terminus NX08_005510 PF00574 Clp protease NX08_005515 PF06689 ClpX C4-type zinc finger NX08_005515 PF10431 C-terminal, D2-small domain, of ClpB protein NX08_005515 PF07724 AAA domain (Cdc48 subfamily) NX08_005520 PF02190 ATP-dependent protease La (LON) substrate-binding domain NX08_005520 PF05362 Lon protease (S16) C-terminal proteolytic domain NX08_005520 PF00004 ATPase family associated with various cellular activities (AAA) NX08_005525 PF00216 Bacterial DNA-binding protein NX08_005550 PF05257 CHAP domain NX08_005550 PF01476 LysM domain NX08_005555 PF16123 Hydroxyacylglutathione hydrolase C-terminus NX08_005555 PF00753 Metallo-beta-lactamase superfamily NX08_005565 PF00075 RNase H NX08_005570 PF00929 Exonuclease NX08_005595 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NX08_005605 PF12706 Beta-lactamase superfamily domain NX08_005605 PF00753 Metallo-beta-lactamase superfamily NX08_005610 PF04055 Radical SAM superfamily NX08_005610 PF06463 Molybdenum Cofactor Synthesis C NX08_005620 PF01967 MoaC family NX08_005625 PF02597 ThiS family NX08_005630 PF02391 MoaE protein NX08_005645 PF12170 DNA polymerase III tau subunit V interacting with alpha NX08_005645 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NX08_005645 PF12169 DNA polymerase III subunits gamma and tau domain III NX08_005650 PF02575 YbaB/EbfC DNA-binding family NX08_005655 PF13662 Toprim domain NX08_005655 PF02132 RecR protein NX08_005660 PF01230 HIT domain NX08_005670 PF11992 Domain of unknown function (DUF3488) NX08_005670 PF13559 Domain of unknown function (DUF4129) NX08_005670 PF01841 Transglutaminase-like superfamily NX08_005680 PF07726 ATPase family associated with various cellular activities (AAA) NX08_005680 PF17863 AAA lid domain NX08_005700 PF02545 Maf-like protein NX08_005705 PF02620 Large ribosomal RNA subunit accumulation protein YceD NX08_005710 PF01783 Ribosomal L32p protein family NX08_005715 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NX08_005715 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NX08_005725 PF00698 Acyl transferase domain NX08_005735 PF00550 Phosphopantetheine attachment site NX08_005740 PF02801 Beta-ketoacyl synthase, C-terminal domain NX08_005740 PF00109 Beta-ketoacyl synthase, N-terminal domain NX08_005745 PF00425 chorismate binding enzyme NX08_005745 PF04715 Anthranilate synthase component I, N terminal region NX08_005750 PF02618 YceG-like family NX08_005755 PF09115 DNA polymerase III, delta subunit, C terminal NX08_005770 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system NX08_005785 PF06506 Propionate catabolism activator NX08_005785 PF00158 Sigma-54 interaction domain NX08_005785 PF02954 Bacterial regulatory protein, Fis family NX08_005800 PF00285 Citrate synthase, C-terminal domain NX08_005805 PF00694 Aconitase C-terminal domain NX08_005805 PF00330 Aconitase family (aconitate hydratase) NX08_005815 PF04303 PrpF protein NX08_005825 PF00593 TonB dependent receptor NX08_005825 PF07715 TonB-dependent Receptor Plug Domain NX08_005840 PF11974 Bacterial alpha-2-macroglobulin MG3 domain NX08_005840 PF01835 MG2 domain NX08_005840 PF00207 Alpha-2-macroglobulin family NX08_005840 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain NX08_005840 PF17962 Bacterial macroglobulin domain 6 NX08_005840 PF07703 Alpha-2-macroglobulin bait region domain NX08_005840 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain NX08_005840 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain NX08_005860 PF00905 Penicillin binding protein transpeptidase domain NX08_005860 PF00912 Transglycosylase NX08_005860 PF06832 Penicillin-Binding Protein C-terminus Family NX08_005870 PF08534 Redoxin NX08_005880 PF01556 DnaJ C terminal domain NX08_005880 PF00226 DnaJ domain NX08_005885 PF00072 Response regulator receiver domain NX08_005890 PF01145 SPFH domain / Band 7 family NX08_005890 PF12221 Bacterial membrane protein N terminal NX08_005895 PF01145 SPFH domain / Band 7 family NX08_005900 PF00709 Adenylosuccinate synthetase NX08_005905 PF11838 ERAP1-like C-terminal domain NX08_005905 PF01433 Peptidase family M1 domain NX08_005925 PF00440 Bacterial regulatory proteins, tetR family NX08_005930 PF08463 EcoEI R protein C-terminal NX08_005930 PF00271 Helicase conserved C-terminal domain NX08_005930 PF04851 Type III restriction enzyme, res subunit NX08_005930 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) NX08_005945 PF12161 HsdM N-terminal domain NX08_005945 PF02384 N-6 DNA Methylase NX08_005950 PF01420 Type I restriction modification DNA specificity domain NX08_005970 PF00300 Histidine phosphatase superfamily (branch 1) NX08_005970 PF13456 Reverse transcriptase-like NX08_005975 PF01256 Carbohydrate kinase NX08_005985 PF00723 Glycosyl hydrolases family 15 NX08_006010 PF05598 Transposase domain (DUF772) NX08_006010 PF01609 Transposase DDE domain NX08_006020 PF17678 Glycosyl hydrolase family 92 N-terminal domain NX08_006020 PF07971 Glycosyl hydrolase family 92 NX08_006025 PF00106 short chain dehydrogenase NX08_006045 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_006065 PF17755 UvrA DNA-binding domain NX08_006095 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NX08_006095 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NX08_006100 PF03450 CO dehydrogenase flavoprotein C-terminal domain NX08_006100 PF00941 FAD binding domain in molybdopterin dehydrogenase NX08_006105 PF00111 2Fe-2S iron-sulfur cluster binding domain NX08_006105 PF01799 [2Fe-2S] binding domain NX08_006105 PF10518 TAT (twin-arginine translocation) pathway signal sequence NX08_006140 PF01726 LexA DNA binding domain NX08_006140 PF00717 Peptidase S24-like NX08_006155 PF07733 Bacterial DNA polymerase III alpha NTPase domain NX08_006155 PF14579 Helix-hairpin-helix motif NX08_006155 PF02811 PHP domain NX08_006155 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NX08_006220 PF12833 Helix-turn-helix domain NX08_006220 PF02311 AraC-like ligand binding domain NX08_006295 PF18011 C-terminal domain found in long catalases NX08_006295 PF06628 Catalase-related immune-responsive NX08_006295 PF00199 Catalase NX08_006300 PF00248 Aldo/keto reductase family NX08_006310 PF02347 Glycine cleavage system P-protein NX08_006330 PF00005 ABC transporter NX08_006330 PF03412 Peptidase C39 family NX08_006330 PF00664 ABC transporter transmembrane region NX08_006335 PF07690 Major Facilitator Superfamily NX08_006355 PF01694 Rhomboid family NX08_006355 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease NX08_006365 PF00884 Sulfatase NX08_006365 PF08019 Phosphoethanolamine transferase EptA/EptB NX08_006380 PF00072 Response regulator receiver domain NX08_006380 PF00486 Transcriptional regulatory protein, C terminal NX08_006385 PF08521 Two-component sensor kinase N-terminal NX08_006385 PF00512 His Kinase A (phospho-acceptor) domain NX08_006385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_006395 PF03776 Septum formation topological specificity factor MinE NX08_006400 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NX08_006405 PF05209 Septum formation inhibitor MinC, N-terminal domain NX08_006405 PF03775 Septum formation inhibitor MinC, C-terminal domain NX08_006415 PF07730 Histidine kinase NX08_006420 PF00196 Bacterial regulatory proteins, luxR family NX08_006420 PF00072 Response regulator receiver domain NX08_006435 PF00730 HhH-GPD superfamily base excision DNA repair protein NX08_006465 PF02222 ATP-grasp domain NX08_006480 PF04377 Arginine-tRNA-protein transferase, C terminus NX08_006480 PF04376 Arginine-tRNA-protein transferase, N terminus NX08_006515 PF00378 Enoyl-CoA hydratase/isomerase NX08_006530 PF17760 UvrA interaction domain NX08_006530 PF17755 UvrA DNA-binding domain NX08_006530 PF00005 ABC transporter NX08_006535 PF00829 Ribosomal prokaryotic L21 protein NX08_006540 PF01016 Ribosomal L27 protein NX08_006545 PF01018 GTP1/OBG NX08_006545 PF01926 50S ribosome-binding GTPase NX08_006550 PF01649 Ribosomal protein S20 NX08_006555 PF03023 Lipid II flippase MurJ NX08_006560 PF06574 FAD synthetase NX08_006560 PF01687 Riboflavin kinase NX08_006565 PF08264 Anticodon-binding domain of tRNA NX08_006565 PF00133 tRNA synthetases class I (I, L, M and V) NX08_006565 PF06827 Zinc finger found in FPG and IleRS NX08_006570 PF01252 Signal peptidase (SPase) II NX08_006575 PF02401 LytB protein NX08_006585 PF06481 COX Aromatic Rich Motif NX08_006585 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NX08_006590 PF00115 Cytochrome C and Quinol oxidase polypeptide I NX08_006595 PF00510 Cytochrome c oxidase subunit III NX08_006600 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NX08_006615 PF18073 Rubredoxin metal binding domain NX08_006620 PF05656 Protein of unknown function (DUF805) NX08_006635 PF12833 Helix-turn-helix domain NX08_006640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_006640 PF00183 Hsp90 protein NX08_006650 PF01740 STAS domain NX08_006650 PF08678 Rsbr N terminal NX08_006655 PF01740 STAS domain NX08_006660 PF13581 Histidine kinase-like ATPase domain NX08_006670 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NX08_006670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_006670 PF00072 Response regulator receiver domain NX08_006670 PF00672 HAMP domain NX08_006670 PF00512 His Kinase A (phospho-acceptor) domain NX08_006670 PF01627 Hpt domain NX08_006675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_006675 PF00512 His Kinase A (phospho-acceptor) domain NX08_006675 PF13188 PAS domain NX08_006675 PF00072 Response regulator receiver domain NX08_006675 PF08448 PAS fold NX08_006690 PF00085 Thioredoxin NX08_006695 PF07237 Protein of unknown function (DUF1428) NX08_006700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_006700 PF13492 GAF domain NX08_006700 PF13493 Domain of unknown function (DUF4118) NX08_006700 PF00512 His Kinase A (phospho-acceptor) domain NX08_006700 PF02702 Osmosensitive K+ channel His kinase sensor domain NX08_006705 PF01339 CheB methylesterase NX08_006710 PF03705 CheR methyltransferase, all-alpha domain NX08_006710 PF01739 CheR methyltransferase, SAM binding domain NX08_006715 PF00672 HAMP domain NX08_006715 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NX08_006715 PF00072 Response regulator receiver domain NX08_006715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_006715 PF01627 Hpt domain NX08_006715 PF00512 His Kinase A (phospho-acceptor) domain NX08_006720 PF13426 PAS domain NX08_006720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_006720 PF00072 Response regulator receiver domain NX08_006725 PF00072 Response regulator receiver domain NX08_006730 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NX08_006735 PF01263 Aldose 1-epimerase NX08_006740 PF01578 Cytochrome C assembly protein NX08_006745 PF00448 SRP54-type protein, GTPase domain NX08_006745 PF02881 SRP54-type protein, helical bundle domain NX08_006745 PF02978 Signal peptide binding domain NX08_006755 PF03060 Nitronate monooxygenase NX08_006760 PF01063 Amino-transferase class IV NX08_006765 PF00886 Ribosomal protein S16 NX08_006770 PF05239 PRC-barrel domain NX08_006770 PF01782 RimM N-terminal domain NX08_006775 PF01746 tRNA (Guanine-1)-methyltransferase NX08_006780 PF01245 Ribosomal protein L19 NX08_006785 PF01554 MatE NX08_006790 PF01479 S4 domain NX08_006795 PF00141 Peroxidase NX08_006805 PF05188 MutS domain II NX08_006805 PF00488 MutS domain V NX08_006805 PF05190 MutS family domain IV NX08_006805 PF01624 MutS domain I NX08_006805 PF05192 MutS domain III NX08_006840 PF00488 MutS domain V NX08_006840 PF01624 MutS domain I NX08_006840 PF05188 MutS domain II NX08_006840 PF05192 MutS domain III NX08_006840 PF05190 MutS family domain IV NX08_006855 PF16355 Domain of unknown function (DUF4982) NX08_006855 PF02837 Glycosyl hydrolases family 2, sugar binding domain NX08_006855 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 NX08_006855 PF00703 Glycosyl hydrolases family 2 NX08_006855 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NX08_006860 PF07745 Glycosyl hydrolase family 53 NX08_006870 PF06114 IrrE N-terminal-like domain NX08_006870 PF01381 Helix-turn-helix NX08_006870 PF09856 Predicted transcriptional regulator (DUF2083) NX08_006875 PF00171 Aldehyde dehydrogenase family NX08_006880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NX08_006880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NX08_006880 PF02770 Acyl-CoA dehydrogenase, middle domain NX08_006890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NX08_006890 PF00378 Enoyl-CoA hydratase/isomerase NX08_006890 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NX08_006895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NX08_006895 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NX08_006905 PF01545 Cation efflux family NX08_006910 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NX08_006910 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NX08_006910 PF00378 Enoyl-CoA hydratase/isomerase NX08_006915 PF08281 Sigma-70, region 4 NX08_006915 PF04542 Sigma-70 region 2 NX08_006925 PF13180 PDZ domain NX08_006930 PF00679 Elongation factor G C-terminus NX08_006930 PF00009 Elongation factor Tu GTP binding domain NX08_006930 PF06421 GTP-binding protein LepA C-terminus NX08_006930 PF03144 Elongation factor Tu domain 2 NX08_006935 PF10502 Signal peptidase, peptidase S26 NX08_006945 PF14622 Ribonuclease-III-like NX08_006945 PF00035 Double-stranded RNA binding motif NX08_006950 PF01926 50S ribosome-binding GTPase NX08_006950 PF07650 KH domain NX08_006955 PF02565 Recombination protein O C terminal NX08_006955 PF11967 Recombination protein O N terminal NX08_006965 PF05958 tRNA (Uracil-5-)-methyltransferase NX08_006975 PF01323 DSBA-like thioredoxin domain NX08_006980 PF01593 Flavin containing amine oxidoreductase NX08_006985 PF04244 Deoxyribodipyrimidine photo-lyase-related protein NX08_006990 PF00933 Glycosyl hydrolase family 3 N terminal domain NX08_007000 PF01048 Phosphorylase superfamily NX08_007005 PF00313 'Cold-shock' DNA-binding domain NX08_007010 PF01494 FAD binding domain NX08_007025 PF08494 DEAD/H associated NX08_007025 PF00270 DEAD/DEAH box helicase NX08_007025 PF00271 Helicase conserved C-terminal domain NX08_007030 PF04675 DNA ligase N terminus NX08_007030 PF01068 ATP dependent DNA ligase domain NX08_007030 PF04679 ATP dependent DNA ligase C terminal region NX08_007040 PF01068 ATP dependent DNA ligase domain NX08_007040 PF04679 ATP dependent DNA ligase C terminal region NX08_007040 PF04675 DNA ligase N terminus NX08_007055 PF00990 Diguanylate cyclase, GGDEF domain NX08_007055 PF00563 EAL domain NX08_007075 PF02803 Thiolase, C-terminal domain NX08_007075 PF00108 Thiolase, N-terminal domain NX08_007080 PF03797 Autotransporter beta-domain NX08_007080 PF00082 Subtilase family NX08_007080 PF12951 Passenger-associated-transport-repeat NX08_007085 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NX08_007085 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NX08_007095 PF01863 Protein of unknown function DUF45 NX08_007105 PF07043 Protein of unknown function (DUF1328) NX08_007115 PF01258 Prokaryotic dksA/traR C4-type zinc finger NX08_007150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NX08_007165 PF03831 PhnA domain NX08_007165 PF08274 PhnA Zinc-Ribbon NX08_007180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NX08_007185 PF07690 Major Facilitator Superfamily NX08_007220 PF03706 Lysylphosphatidylglycerol synthase TM region NX08_007220 PF09924 Uncharacterised conserved protein (DUF2156) NX08_007230 PF01042 Endoribonuclease L-PSP NX08_007275 PF04542 Sigma-70 region 2 NX08_007275 PF04545 Sigma-70, region 4 NX08_007290 PF04060 Putative Fe-S cluster NX08_007300 PF09334 tRNA synthetases class I (M) NX08_007300 PF01588 Putative tRNA binding domain NX08_007310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NX08_007315 PF00324 Amino acid permease NX08_007320 PF02574 Homocysteine S-methyltransferase NX08_007330 PF02592 Putative vitamin uptake transporter NX08_007375 PF10947 Protein of unknown function (DUF2628) NX08_007385 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NX08_007390 PF07733 Bacterial DNA polymerase III alpha NTPase domain NX08_007390 PF01336 OB-fold nucleic acid binding domain NX08_007390 PF02811 PHP domain NX08_007390 PF14579 Helix-hairpin-helix motif NX08_007390 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NX08_007400 PF01351 Ribonuclease HII NX08_007405 PF02684 Lipid-A-disaccharide synthetase NX08_007410 PF00132 Bacterial transferase hexapeptide (six repeats) NX08_007410 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NX08_007415 PF07977 FabA-like domain NX08_007420 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NX08_007420 PF00132 Bacterial transferase hexapeptide (six repeats) NX08_007430 PF01103 Surface antigen NX08_007430 PF07244 Surface antigen variable number repeat NX08_007435 PF02163 Peptidase family M50 NX08_007435 PF17820 PDZ domain NX08_007440 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NX08_007440 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NX08_007440 PF13288 DXP reductoisomerase C-terminal domain NX08_007450 PF01255 Putative undecaprenyl diphosphate synthase NX08_007455 PF01765 Ribosome recycling factor NX08_007460 PF00696 Amino acid kinase family NX08_007465 PF00990 Diguanylate cyclase, GGDEF domain NX08_007465 PF00072 Response regulator receiver domain NX08_007470 PF00889 Elongation factor TS NX08_007475 PF00318 Ribosomal protein S2 NX08_007510 PF00557 Metallopeptidase family M24 NX08_007515 PF01909 Nucleotidyltransferase domain NX08_007515 PF01966 HD domain NX08_007515 PF08335 GlnD PII-uridylyltransferase NX08_007520 PF14602 Hexapeptide repeat of succinyl-transferase NX08_007520 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NX08_007520 PF00132 Bacterial transferase hexapeptide (six repeats) NX08_007530 PF03960 ArsC family NX08_007540 PF07687 Peptidase dimerisation domain NX08_007540 PF01546 Peptidase family M20/M25/M40 NX08_007545 PF13537 Glutamine amidotransferase domain NX08_007545 PF00733 Asparagine synthase NX08_007555 PF07715 TonB-dependent Receptor Plug Domain NX08_007555 PF00593 TonB dependent receptor NX08_007560 PF01804 Penicillin amidase NX08_007565 PF00210 Ferritin-like domain NX08_007575 PF05724 Thiopurine S-methyltransferase (TPMT) NX08_007585 PF03989 DNA gyrase C-terminal domain, beta-propeller NX08_007585 PF00521 DNA gyrase/topoisomerase IV, subunit A NX08_007600 PF02321 Outer membrane efflux protein NX08_007605 PF00529 HlyD membrane-fusion protein of T1SS NX08_007605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NX08_007610 PF07690 Major Facilitator Superfamily NX08_007620 PF14310 Fibronectin type III-like domain NX08_007620 PF01915 Glycosyl hydrolase family 3 C-terminal domain NX08_007620 PF00933 Glycosyl hydrolase family 3 N terminal domain NX08_007630 PF00854 POT family NX08_007685 PF01432 Peptidase family M3 NX08_007695 PF00255 Glutathione peroxidase NX08_007700 PF00970 Oxidoreductase FAD-binding domain NX08_007700 PF00175 Oxidoreductase NAD-binding domain NX08_007705 PF00005 ABC transporter NX08_007710 PF05683 Fumarase C-terminus NX08_007710 PF05681 Fumarate hydratase (Fumerase) NX08_007725 PF02253 Phospholipase A1 NX08_007735 PF00313 'Cold-shock' DNA-binding domain NX08_007750 PF00899 ThiF family NX08_007755 PF01026 TatD related DNase NX08_007775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NX08_007775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NX08_007775 PF02770 Acyl-CoA dehydrogenase, middle domain NX08_007785 PF00043 Glutathione S-transferase, C-terminal domain NX08_007785 PF02798 Glutathione S-transferase, N-terminal domain NX08_007795 PF13537 Glutamine amidotransferase domain NX08_007795 PF00733 Asparagine synthase NX08_007800 PF03358 NADPH-dependent FMN reductase NX08_007805 PF00772 DnaB-like helicase N terminal domain NX08_007805 PF03796 DnaB-like helicase C terminal domain NX08_007810 PF03441 FAD binding domain of DNA photolyase NX08_007810 PF00875 DNA photolyase NX08_007815 PF05736 OprF membrane domain NX08_007815 PF00691 OmpA family NX08_007820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_007820 PF03466 LysR substrate binding domain NX08_007835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NX08_007840 PF00873 AcrB/AcrD/AcrF family NX08_007845 PF00106 short chain dehydrogenase NX08_007850 PF02321 Outer membrane efflux protein NX08_007855 PF00990 Diguanylate cyclase, GGDEF domain NX08_007855 PF08448 PAS fold NX08_007865 PF00990 Diguanylate cyclase, GGDEF domain NX08_007930 PF13356 Arm DNA-binding domain NX08_007930 PF00589 Phage integrase family NX08_007940 PF00082 Subtilase family NX08_007945 PF01668 SmpB protein NX08_007955 PF03658 RnfH family Ubiquitin NX08_007965 PF04355 SmpA / OmlA family NX08_007970 PF01475 Ferric uptake regulator family NX08_007975 PF02463 RecF/RecN/SMC N terminal domain NX08_007980 PF01628 HrcA protein C terminal domain NX08_007980 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding NX08_007985 PF01025 GrpE NX08_007990 PF00012 Hsp70 protein NX08_007995 PF00684 DnaJ central domain NX08_007995 PF01556 DnaJ C terminal domain NX08_007995 PF00226 DnaJ domain NX08_008000 PF08543 Phosphomethylpyrimidine kinase NX08_008025 PF03412 Peptidase C39 family NX08_008025 PF00005 ABC transporter NX08_008025 PF00664 ABC transporter transmembrane region NX08_008030 PF03466 LysR substrate binding domain NX08_008030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_008040 PF00005 ABC transporter NX08_008040 PF00664 ABC transporter transmembrane region NX08_008045 PF01205 Uncharacterized protein family UPF0029 NX08_008050 PF03641 Possible lysine decarboxylase NX08_008055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NX08_008055 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_008060 PF02817 e3 binding domain NX08_008060 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NX08_008060 PF00364 Biotin-requiring enzyme NX08_008065 PF02779 Transketolase, pyrimidine binding domain NX08_008065 PF16870 2-oxoglutarate dehydrogenase C-terminal NX08_008065 PF00676 Dehydrogenase E1 component NX08_008065 PF16078 2-oxoglutarate dehydrogenase N-terminus NX08_008075 PF08007 Cupin superfamily protein NX08_008105 PF08328 Adenylosuccinate lyase C-terminal NX08_008105 PF00206 Lyase NX08_008115 PF01595 Cyclin M transmembrane N-terminal domain NX08_008115 PF03471 Transporter associated domain NX08_008115 PF00571 CBS domain NX08_008120 PF10415 Fumarase C C-terminus NX08_008120 PF00206 Lyase NX08_008145 PF00005 ABC transporter NX08_008150 PF00392 Bacterial regulatory proteins, gntR family NX08_008160 PF00255 Glutathione peroxidase NX08_008165 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NX08_008165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NX08_008170 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NX08_008170 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NX08_008170 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NX08_008175 PF04102 SlyX NX08_008190 PF00356 Bacterial regulatory proteins, lacI family NX08_008195 PF07690 Major Facilitator Superfamily NX08_008200 PF00294 pfkB family carbohydrate kinase NX08_008215 PF00809 Pterin binding enzyme NX08_008215 PF02574 Homocysteine S-methyltransferase NX08_008220 PF01209 ubiE/COQ5 methyltransferase family NX08_008225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NX08_008225 PF02770 Acyl-CoA dehydrogenase, middle domain NX08_008225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NX08_008230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NX08_008230 PF02770 Acyl-CoA dehydrogenase, middle domain NX08_008230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NX08_008250 PF08461 Ribonuclease R winged-helix domain NX08_008250 PF08206 Ribonuclease B OB domain NX08_008250 PF00773 RNB domain NX08_008250 PF00575 S1 RNA binding domain NX08_008250 PF17876 Cold shock domain NX08_008260 PF08032 RNA 2'-O ribose methyltransferase substrate binding NX08_008260 PF00588 SpoU rRNA Methylase family NX08_008280 PF00929 Exonuclease NX08_008290 PF01895 PhoU domain NX08_008295 PF00005 ABC transporter NX08_008300 PF00528 Binding-protein-dependent transport system inner membrane component NX08_008305 PF00528 Binding-protein-dependent transport system inner membrane component NX08_008310 PF12849 PBP superfamily domain NX08_008320 PF12849 PBP superfamily domain NX08_008335 PF00484 Carbonic anhydrase NX08_008340 PF00916 Sulfate permease family NX08_008340 PF01740 STAS domain NX08_008350 PF00633 Helix-hairpin-helix motif NX08_008350 PF10576 Iron-sulfur binding domain of endonuclease III NX08_008350 PF00730 HhH-GPD superfamily base excision DNA repair protein NX08_008360 PF00378 Enoyl-CoA hydratase/isomerase NX08_008365 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NX08_008365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NX08_008370 PF00293 NUDIX domain NX08_008375 PF00581 Rhodanese-like domain NX08_008415 PF01170 Putative RNA methylase family UPF0020 NX08_008415 PF10672 S-adenosylmethionine-dependent methyltransferase NX08_008415 PF02926 THUMP domain NX08_008420 PF01513 ATP-NAD kinase NX08_008435 PF00248 Aldo/keto reductase family NX08_008445 PF08411 Exonuclease C-terminal NX08_008445 PF00929 Exonuclease NX08_008450 PF01494 FAD binding domain NX08_008455 PF00266 Aminotransferase class-V NX08_008465 PF06052 3-hydroxyanthranilic acid dioxygenase NX08_008470 PF00484 Carbonic anhydrase NX08_008475 PF04299 Putative FMN-binding domain NX08_008495 PF00152 tRNA synthetases class II (D, K and N) NX08_008495 PF01336 OB-fold nucleic acid binding domain NX08_008500 PF01521 Iron-sulphur cluster biosynthesis NX08_008505 PF01250 Ribosomal protein S6 NX08_008510 PF01084 Ribosomal protein S18 NX08_008515 PF01281 Ribosomal protein L9, N-terminal domain NX08_008515 PF03948 Ribosomal protein L9, C-terminal domain NX08_008520 PF02463 RecF/RecN/SMC N terminal domain NX08_008525 PF04354 ZipA, C-terminal FtsZ-binding domain NX08_008535 PF00155 Aminotransferase class I and II NX08_008540 PF01653 NAD-dependent DNA ligase adenylation domain NX08_008540 PF12826 Helix-hairpin-helix motif NX08_008540 PF00533 BRCA1 C Terminus (BRCT) domain NX08_008540 PF03120 NAD-dependent DNA ligase OB-fold domain NX08_008540 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NX08_008545 PF00152 tRNA synthetases class II (D, K and N) NX08_008560 PF01008 Initiation factor 2 subunit family NX08_008565 PF00521 DNA gyrase/topoisomerase IV, subunit A NX08_008565 PF03989 DNA gyrase C-terminal domain, beta-propeller NX08_008605 PF01175 Urocanase Rossmann-like domain NX08_008605 PF17392 Urocanase C-terminal domain NX08_008605 PF17391 Urocanase N-terminal domain NX08_008615 PF00221 Aromatic amino acid lyase NX08_008620 PF07969 Amidohydrolase family NX08_008630 PF00392 Bacterial regulatory proteins, gntR family NX08_008630 PF07702 UTRA domain NX08_008655 PF01794 Ferric reductase like transmembrane component NX08_008660 PF00174 Oxidoreductase molybdopterin binding domain NX08_008665 PF00266 Aminotransferase class-V NX08_008670 PF01842 ACT domain NX08_008670 PF01817 Chorismate mutase type II NX08_008670 PF00800 Prephenate dehydratase NX08_008675 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NX08_008685 PF03544 Gram-negative bacterial TonB protein C-terminal NX08_008690 PF02403 Seryl-tRNA synthetase N-terminal domain NX08_008690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NX08_008695 PF02525 Flavodoxin-like fold NX08_008700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_008700 PF03466 LysR substrate binding domain NX08_008735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_008735 PF00672 HAMP domain NX08_008735 PF02203 Tar ligand binding domain homologue NX08_008755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_008755 PF13188 PAS domain NX08_008755 PF08448 PAS fold NX08_008755 PF00512 His Kinase A (phospho-acceptor) domain NX08_008755 PF00072 Response regulator receiver domain NX08_008760 PF00512 His Kinase A (phospho-acceptor) domain NX08_008760 PF00072 Response regulator receiver domain NX08_008760 PF01627 Hpt domain NX08_008760 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NX08_008760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_008760 PF00672 HAMP domain NX08_008765 PF06745 KaiC NX08_008770 PF00072 Response regulator receiver domain NX08_008770 PF13426 PAS domain NX08_008770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_008780 PF03918 Cytochrome C biogenesis protein NX08_008785 PF08534 Redoxin NX08_008790 PF01578 Cytochrome C assembly protein NX08_008790 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NX08_008795 PF03100 CcmE NX08_008800 PF04995 Heme exporter protein D (CcmD) NX08_008805 PF01578 Cytochrome C assembly protein NX08_008810 PF00082 Subtilase family NX08_008820 PF04542 Sigma-70 region 2 NX08_008820 PF08281 Sigma-70, region 4 NX08_008835 PF00034 Cytochrome c NX08_008850 PF05523 WxcM-like, C-terminal NX08_008870 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NX08_008875 PF01943 Polysaccharide biosynthesis protein NX08_008880 PF00535 Glycosyl transferase family 2 NX08_008895 PF08241 Methyltransferase domain NX08_008900 PF01979 Amidohydrolase family NX08_008900 PF13382 Adenine deaminase C-terminal domain NX08_008915 PF13579 Glycosyl transferase 4-like domain NX08_008915 PF00534 Glycosyl transferases group 1 NX08_008930 PF00005 ABC transporter NX08_008935 PF00005 ABC transporter NX08_008935 PF00664 ABC transporter transmembrane region NX08_008940 PF07690 Major Facilitator Superfamily NX08_008950 PF00296 Luciferase-like monooxygenase NX08_008965 PF01595 Cyclin M transmembrane N-terminal domain NX08_008965 PF00571 CBS domain NX08_008965 PF03471 Transporter associated domain NX08_008980 PF01384 Phosphate transporter family NX08_008985 PF02698 DUF218 domain NX08_008995 PF02824 TGS domain NX08_008995 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NX08_008995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NX08_008995 PF03129 Anticodon binding domain NX08_009000 PF00707 Translation initiation factor IF-3, C-terminal domain NX08_009000 PF05198 Translation initiation factor IF-3, N-terminal domain NX08_009005 PF01632 Ribosomal protein L35 NX08_009010 PF00453 Ribosomal protein L20 NX08_009015 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NX08_009015 PF01409 tRNA synthetases class II core domain (F) NX08_009020 PF03483 B3/4 domain NX08_009020 PF03147 Ferredoxin-fold anticodon binding domain NX08_009020 PF01588 Putative tRNA binding domain NX08_009020 PF03484 tRNA synthetase B5 domain NX08_009020 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NX08_009025 PF00216 Bacterial DNA-binding protein NX08_009030 PF13411 MerR HTH family regulatory protein NX08_009050 PF02397 Bacterial sugar transferase NX08_009070 PF00534 Glycosyl transferases group 1 NX08_009070 PF13439 Glycosyltransferase Family 4 NX08_009080 PF14667 Polysaccharide biosynthesis C-terminal domain NX08_009095 PF03808 Glycosyl transferase WecB/TagA/CpsF family NX08_009110 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NX08_009110 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NX08_009115 PF00753 Metallo-beta-lactamase superfamily NX08_009115 PF16123 Hydroxyacylglutathione hydrolase C-terminus NX08_009120 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NX08_009140 PF02779 Transketolase, pyrimidine binding domain NX08_009140 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NX08_009140 PF02780 Transketolase, C-terminal domain NX08_009150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NX08_009150 PF12806 Acetyl-CoA dehydrogenase C-terminal like NX08_009150 PF02770 Acyl-CoA dehydrogenase, middle domain NX08_009150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NX08_009160 PF08212 Lipocalin-like domain NX08_009195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_009195 PF13426 PAS domain NX08_009195 PF00072 Response regulator receiver domain NX08_009200 PF04362 Bacterial Fe(2+) trafficking NX08_009205 PF00730 HhH-GPD superfamily base excision DNA repair protein NX08_009205 PF00633 Helix-hairpin-helix motif NX08_009205 PF14815 NUDIX domain NX08_009215 PF00448 SRP54-type protein, GTPase domain NX08_009215 PF02881 SRP54-type protein, helical bundle domain NX08_009225 PF05544 Proline racemase NX08_009250 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_009250 PF04324 BFD-like [2Fe-2S] binding domain NX08_009255 PF00701 Dihydrodipicolinate synthetase family NX08_009260 PF00171 Aldehyde dehydrogenase family NX08_009265 PF00557 Metallopeptidase family M24 NX08_009265 PF01321 Creatinase/Prolidase N-terminal domain NX08_009280 PF13520 Amino acid permease NX08_009310 PF00082 Subtilase family NX08_009310 PF09286 Pro-kumamolisin, activation domain NX08_009335 PF07532 Bacterial Ig-like domain (group 4) NX08_009340 PF04616 Glycosyl hydrolases family 43 NX08_009350 PF07715 TonB-dependent Receptor Plug Domain NX08_009350 PF00593 TonB dependent receptor NX08_009380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_009380 PF00183 Hsp90 protein NX08_009390 PF01467 Cytidylyltransferase-like NX08_009405 PF00037 4Fe-4S binding domain NX08_009425 PF02927 Cellulase N-terminal ig-like domain NX08_009425 PF00759 Glycosyl hydrolase family 9 NX08_009470 PF02547 Queuosine biosynthesis protein NX08_009475 PF01702 Queuine tRNA-ribosyltransferase NX08_009480 PF02699 Preprotein translocase subunit NX08_009485 PF13721 SecD export protein N-terminal TM region NX08_009485 PF07549 SecD/SecF GG Motif NX08_009485 PF02355 Protein export membrane protein NX08_009490 PF02355 Protein export membrane protein NX08_009490 PF07549 SecD/SecF GG Motif NX08_009525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NX08_009530 PF00294 pfkB family carbohydrate kinase NX08_009535 PF00391 PEP-utilising enzyme, mobile domain NX08_009535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NX08_009535 PF05524 PEP-utilising enzyme, N-terminal NX08_009535 PF02896 PEP-utilising enzyme, TIM barrel domain NX08_009535 PF00381 PTS HPr component phosphorylation site NX08_009540 PF00356 Bacterial regulatory proteins, lacI family NX08_009595 PF00873 AcrB/AcrD/AcrF family NX08_009600 PF00529 HlyD membrane-fusion protein of T1SS NX08_009600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NX08_009610 PF05088 Bacterial NAD-glutamate dehydrogenase NX08_009615 PF07690 Major Facilitator Superfamily NX08_009625 PF00072 Response regulator receiver domain NX08_009630 PF00072 Response regulator receiver domain NX08_009630 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NX08_009630 PF01627 Hpt domain NX08_009630 PF00512 His Kinase A (phospho-acceptor) domain NX08_009630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_009630 PF00672 HAMP domain NX08_009635 PF04286 Protein of unknown function (DUF445) NX08_009645 PF00005 ABC transporter NX08_009650 PF00202 Aminotransferase class-III NX08_009660 PF07690 Major Facilitator Superfamily NX08_009665 PF02634 FdhD/NarQ family NX08_009670 PF00384 Molybdopterin oxidoreductase NX08_009685 PF00083 Sugar (and other) transporter NX08_009685 PF07690 Major Facilitator Superfamily NX08_009690 PF00990 Diguanylate cyclase, GGDEF domain NX08_009690 PF00072 Response regulator receiver domain NX08_009695 PF01266 FAD dependent oxidoreductase NX08_009700 PF00120 Glutamine synthetase, catalytic domain NX08_009710 PF00120 Glutamine synthetase, catalytic domain NX08_009715 PF00202 Aminotransferase class-III NX08_009720 PF13416 Bacterial extracellular solute-binding protein NX08_009725 PF13533 Biotin-lipoyl like NX08_009730 PF07690 Major Facilitator Superfamily NX08_009735 PF02321 Outer membrane efflux protein NX08_009740 PF08402 TOBE domain NX08_009740 PF00005 ABC transporter NX08_009745 PF00528 Binding-protein-dependent transport system inner membrane component NX08_009750 PF00528 Binding-protein-dependent transport system inner membrane component NX08_009755 PF00171 Aldehyde dehydrogenase family NX08_009770 PF03471 Transporter associated domain NX08_009770 PF00571 CBS domain NX08_009785 PF02130 Uncharacterized protein family UPF0054 NX08_009795 PF02562 PhoH-like protein NX08_009800 PF01938 TRAM domain NX08_009800 PF00919 Uncharacterized protein family UPF0004 NX08_009800 PF04055 Radical SAM superfamily NX08_009815 PF01464 Transglycosylase SLT domain NX08_009820 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NX08_009820 PF00355 Rieske [2Fe-2S] domain NX08_009825 PF00033 Cytochrome b/b6/petB NX08_009825 PF00032 Cytochrome b(C-terminal)/b6/petD NX08_009830 PF02167 Cytochrome C1 family NX08_009835 PF00043 Glutathione S-transferase, C-terminal domain NX08_009835 PF02798 Glutathione S-transferase, N-terminal domain NX08_009840 PF04386 Stringent starvation protein B NX08_009860 PF00106 short chain dehydrogenase NX08_009865 PF00271 Helicase conserved C-terminal domain NX08_009865 PF08494 DEAD/H associated NX08_009865 PF00270 DEAD/DEAH box helicase NX08_009870 PF02245 Methylpurine-DNA glycosylase (MPG) NX08_009875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_009875 PF02203 Tar ligand binding domain homologue NX08_009875 PF00672 HAMP domain NX08_009880 PF01584 CheW-like domain NX08_009905 PF04679 ATP dependent DNA ligase C terminal region NX08_009905 PF01068 ATP dependent DNA ligase domain NX08_009905 PF13298 DNA polymerase Ligase (LigD) NX08_009910 PF00570 HRDC domain NX08_009910 PF01612 3'-5' exonuclease NX08_009925 PF03781 Sulfatase-modifying factor enzyme 1 NX08_009935 PF13742 OB-fold nucleic acid binding domain NX08_009935 PF02601 Exonuclease VII, large subunit NX08_009945 PF08331 Domain of unknown function (DUF1730) NX08_009950 PF01256 Carbohydrate kinase NX08_009950 PF03853 YjeF-related protein N-terminus NX08_009955 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NX08_009960 PF11741 AMIN domain NX08_009960 PF01520 N-acetylmuramoyl-L-alanine amidase NX08_009965 PF08676 MutL C terminal dimerisation domain NX08_009965 PF01119 DNA mismatch repair protein, C-terminal domain NX08_009985 PF07879 PHB/PHA accumulation regulator DNA-binding domain NX08_009985 PF05233 PHB accumulation regulatory domain NX08_009990 PF00106 short chain dehydrogenase NX08_009995 PF00749 tRNA synthetases class I (E and Q), catalytic domain NX08_010000 PF01435 Peptidase family M48 NX08_010005 PF00563 EAL domain NX08_010005 PF00990 Diguanylate cyclase, GGDEF domain NX08_010005 PF00072 Response regulator receiver domain NX08_010015 PF07152 YaeQ protein NX08_010020 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NX08_010025 PF00313 'Cold-shock' DNA-binding domain NX08_010030 PF14497 Glutathione S-transferase, C-terminal domain NX08_010030 PF02798 Glutathione S-transferase, N-terminal domain NX08_010040 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NX08_010045 PF00156 Phosphoribosyl transferase domain NX08_010050 PF00271 Helicase conserved C-terminal domain NX08_010050 PF03880 DbpA RNA binding domain NX08_010050 PF00270 DEAD/DEAH box helicase NX08_010070 PF00545 ribonuclease NX08_010075 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NX08_010075 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NX08_010080 PF00459 Inositol monophosphatase family NX08_010085 PF00588 SpoU rRNA Methylase family NX08_010095 PF13188 PAS domain NX08_010095 PF03707 Bacterial signalling protein N terminal repeat NX08_010095 PF00563 EAL domain NX08_010095 PF00990 Diguanylate cyclase, GGDEF domain NX08_010105 PF04055 Radical SAM superfamily NX08_010110 PF09285 Elongation factor P, C-terminal NX08_010110 PF01132 Elongation factor P (EF-P) OB domain NX08_010110 PF08207 Elongation factor P (EF-P) KOW-like domain NX08_010125 PF01979 Amidohydrolase family NX08_010135 PF13419 Haloacid dehalogenase-like hydrolase NX08_010165 PF05985 Ethanolamine ammonia-lyase light chain (EutC) NX08_010180 PF08460 Bacterial SH3 domain NX08_010180 PF01551 Peptidase family M23 NX08_010185 PF01979 Amidohydrolase family NX08_010190 PF01809 Putative membrane protein insertion efficiency factor NX08_010195 PF01258 Prokaryotic dksA/traR C4-type zinc finger NX08_010205 PF02657 Fe-S metabolism associated domain NX08_010210 PF01406 tRNA synthetases class I (C) catalytic domain NX08_010210 PF09190 DALR domain NX08_010220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NX08_010220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NX08_010225 PF00764 Arginosuccinate synthase NX08_010235 PF07687 Peptidase dimerisation domain NX08_010235 PF01546 Peptidase family M20/M25/M40 NX08_010240 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase NX08_010240 PF00696 Amino acid kinase family NX08_010250 PF01118 Semialdehyde dehydrogenase, NAD binding domain NX08_010255 PF00206 Lyase NX08_010270 PF00696 Amino acid kinase family NX08_010270 PF01472 PUA domain NX08_010275 PF00171 Aldehyde dehydrogenase family NX08_010280 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain NX08_010280 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NX08_010310 PF00005 ABC transporter NX08_010310 PF00664 ABC transporter transmembrane region NX08_010315 PF00005 ABC transporter NX08_010315 PF00664 ABC transporter transmembrane region NX08_010325 PF00313 'Cold-shock' DNA-binding domain NX08_010330 PF00561 alpha/beta hydrolase fold NX08_010340 PF03918 Cytochrome C biogenesis protein NX08_010345 PF08534 Redoxin NX08_010350 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NX08_010350 PF01578 Cytochrome C assembly protein NX08_010355 PF03100 CcmE NX08_010365 PF01578 Cytochrome C assembly protein NX08_010370 PF03379 CcmB protein NX08_010375 PF00005 ABC transporter NX08_010380 PF00155 Aminotransferase class I and II NX08_010390 PF00795 Carbon-nitrogen hydrolase NX08_010405 PF00849 RNA pseudouridylate synthase NX08_010405 PF01479 S4 domain NX08_010410 PF04079 Segregation and condensation complex subunit ScpB NX08_010415 PF02616 Segregation and condensation protein ScpA NX08_010420 PF03795 YCII-related domain NX08_010430 PF00356 Bacterial regulatory proteins, lacI family NX08_010450 PF00528 Binding-protein-dependent transport system inner membrane component NX08_010455 PF00528 Binding-protein-dependent transport system inner membrane component NX08_010480 PF00795 Carbon-nitrogen hydrolase NX08_010490 PF04371 Porphyromonas-type peptidyl-arginine deiminase NX08_010505 PF00444 Ribosomal protein L36 NX08_010510 PF02224 Cytidylate kinase NX08_010515 PF00575 S1 RNA binding domain NX08_010520 PF00216 Bacterial DNA-binding protein NX08_010530 PF18073 Rubredoxin metal binding domain NX08_010535 PF00953 Glycosyl transferase family 4 NX08_010540 PF02719 Polysaccharide biosynthesis protein NX08_010545 PF00483 Nucleotidyl transferase NX08_010565 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NX08_010565 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NX08_010570 PF00571 CBS domain NX08_010570 PF00478 IMP dehydrogenase / GMP reductase domain NX08_010575 PF00117 Glutamine amidotransferase class-I NX08_010575 PF00958 GMP synthase C terminal domain NX08_010575 PF02540 NAD synthase NX08_010580 PF13356 Arm DNA-binding domain NX08_010580 PF00589 Phage integrase family NX08_010605 PF10134 Replication initiator protein A NX08_010620 PF17273 Family of unknown function (DUF5338) NX08_010630 PF03432 Relaxase/Mobilisation nuclease domain NX08_010630 PF18821 Large polyvalent protein-associated domain 7 NX08_010645 PF04610 TrbL/VirB6 plasmid conjugal transfer protein NX08_010690 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) NX08_010695 PF00361 Proton-conducting membrane transporter NX08_010695 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus NX08_010695 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NX08_010700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_010700 PF03466 LysR substrate binding domain NX08_010705 PF03466 LysR substrate binding domain NX08_010705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_010720 PF03601 Conserved hypothetical protein 698 NX08_010725 PF03466 LysR substrate binding domain NX08_010725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_010740 PF00072 Response regulator receiver domain NX08_010740 PF00196 Bacterial regulatory proteins, luxR family NX08_010750 PF07730 Histidine kinase NX08_010750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_010750 PF13185 GAF domain NX08_010750 PF13492 GAF domain NX08_010765 PF00857 Isochorismatase family NX08_010780 PF05977 Transmembrane secretion effector NX08_010790 PF00561 alpha/beta hydrolase fold NX08_010795 PF01566 Natural resistance-associated macrophage protein NX08_010800 PF02742 Iron dependent repressor, metal binding and dimerisation domain NX08_010800 PF01325 Iron dependent repressor, N-terminal DNA binding domain NX08_010805 PF14437 MafB19-like deaminase NX08_010810 PF00929 Exonuclease NX08_010815 PF05552 Conserved TM helix NX08_010815 PF00924 Mechanosensitive ion channel NX08_010820 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NX08_010820 PF00391 PEP-utilising enzyme, mobile domain NX08_010820 PF02896 PEP-utilising enzyme, TIM barrel domain NX08_010825 PF03618 Kinase/pyrophosphorylase NX08_010845 PF01066 CDP-alcohol phosphatidyltransferase NX08_010855 PF00561 alpha/beta hydrolase fold NX08_010870 PF01266 FAD dependent oxidoreductase NX08_010870 PF00355 Rieske [2Fe-2S] domain NX08_010880 PF17674 HHH domain NX08_010880 PF00575 S1 RNA binding domain NX08_010880 PF09371 Tex-like protein N-terminal domain NX08_010880 PF16921 Tex protein YqgF-like domain NX08_010890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_010890 PF09308 LuxQ, periplasmic NX08_010890 PF00072 Response regulator receiver domain NX08_010890 PF00512 His Kinase A (phospho-acceptor) domain NX08_010935 PF00034 Cytochrome c NX08_010945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NX08_010950 PF00873 AcrB/AcrD/AcrF family NX08_010955 PF00873 AcrB/AcrD/AcrF family NX08_010965 PF01081 KDPG and KHG aldolase NX08_010970 PF00920 Dehydratase family NX08_010975 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NX08_010980 PF02685 Glucokinase NX08_010985 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NX08_010985 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NX08_010990 PF17912 MalK OB fold domain NX08_010990 PF00005 ABC transporter NX08_011010 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NX08_011015 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NX08_011020 PF00890 FAD binding domain NX08_011020 PF02910 Fumarate reductase flavoprotein C-term NX08_011030 PF13085 2Fe-2S iron-sulfur cluster binding domain NX08_011035 PF03937 Flavinator of succinate dehydrogenase NX08_011045 PF02687 FtsX-like permease family NX08_011045 PF12704 MacB-like periplasmic core domain NX08_011050 PF00005 ABC transporter NX08_011060 PF00753 Metallo-beta-lactamase superfamily NX08_011060 PF03772 Competence protein NX08_011065 PF01618 MotA/TolQ/ExbB proton channel family NX08_011075 PF00664 ABC transporter transmembrane region NX08_011075 PF00005 ABC transporter NX08_011080 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NX08_011085 PF02348 Cytidylyltransferase NX08_011090 PF01451 Low molecular weight phosphotyrosine protein phosphatase NX08_011100 PF02151 UvrB/uvrC motif NX08_011100 PF08459 UvrC Helix-hairpin-helix N-terminal NX08_011100 PF01541 GIY-YIG catalytic domain NX08_011105 PF01066 CDP-alcohol phosphatidyltransferase NX08_011130 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NX08_011130 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NX08_011130 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NX08_011140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NX08_011155 PF00072 Response regulator receiver domain NX08_011155 PF00196 Bacterial regulatory proteins, luxR family NX08_011165 PF12111 Polyribonucleotide phosphorylase C terminal NX08_011165 PF10150 Ribonuclease E/G family NX08_011165 PF00575 S1 RNA binding domain NX08_011170 PF01479 S4 domain NX08_011170 PF00849 RNA pseudouridylate synthase NX08_011175 PF11737 Protein of unknown function (DUF3300) NX08_011180 PF02535 ZIP Zinc transporter NX08_011195 PF01329 Pterin 4 alpha carbinolamine dehydratase NX08_011200 PF01106 NifU-like domain NX08_011235 PF00072 Response regulator receiver domain NX08_011235 PF00486 Transcriptional regulatory protein, C terminal NX08_011240 PF03150 Di-haem cytochrome c peroxidase NX08_011240 PF00034 Cytochrome c NX08_011245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_011245 PF00512 His Kinase A (phospho-acceptor) domain NX08_011250 PF03466 LysR substrate binding domain NX08_011250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_011270 PF00069 Protein kinase domain NX08_011310 PF16671 Actin cross-linking domain NX08_011310 PF04717 Type VI secretion system, phage-baseplate injector NX08_011330 PF07724 AAA domain (Cdc48 subfamily) NX08_011330 PF17871 AAA lid domain NX08_011330 PF00004 ATPase family associated with various cellular activities (AAA) NX08_011330 PF10431 C-terminal, D2-small domain, of ClpB protein NX08_011355 PF05638 Type VI secretion system effector, Hcp NX08_011370 PF13276 HTH-like domain NX08_011370 PF13683 Integrase core domain NX08_011375 PF07995 Glucose / Sorbosone dehydrogenase NX08_011400 PF00082 Subtilase family NX08_011400 PF03797 Autotransporter beta-domain NX08_011410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NX08_011415 PF00873 AcrB/AcrD/AcrF family NX08_011425 PF13426 PAS domain NX08_011425 PF00512 His Kinase A (phospho-acceptor) domain NX08_011425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_011425 PF00072 Response regulator receiver domain NX08_011425 PF08448 PAS fold NX08_011430 PF00072 Response regulator receiver domain NX08_011430 PF00196 Bacterial regulatory proteins, luxR family NX08_011440 PF08448 PAS fold NX08_011440 PF00990 Diguanylate cyclase, GGDEF domain NX08_011440 PF00563 EAL domain NX08_011440 PF08447 PAS fold NX08_011455 PF05974 Domain of unknown function (DUF892) NX08_011480 PF14824 Sirohaem biosynthesis protein central NX08_011480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NX08_011480 PF10414 Sirohaem synthase dimerisation region NX08_011490 PF12804 MobA-like NTP transferase domain NX08_011495 PF03453 MoeA N-terminal region (domain I and II) NX08_011495 PF03454 MoeA C-terminal region (domain IV) NX08_011495 PF00994 Probable molybdopterin binding domain NX08_011500 PF03372 Endonuclease/Exonuclease/phosphatase family NX08_011510 PF13823 Alcohol dehydrogenase GroES-associated NX08_011510 PF00107 Zinc-binding dehydrogenase NX08_011510 PF08240 Alcohol dehydrogenase GroES-like domain NX08_011525 PF00067 Cytochrome P450 NX08_011540 PF00899 ThiF family NX08_011545 PF03454 MoeA C-terminal region (domain IV) NX08_011545 PF03453 MoeA N-terminal region (domain I and II) NX08_011545 PF00994 Probable molybdopterin binding domain NX08_011555 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NX08_011555 PF01926 50S ribosome-binding GTPase NX08_011560 PF13360 PQQ-like domain NX08_011560 PF01011 PQQ enzyme repeat NX08_011570 PF13464 Domain of unknown function (DUF4115) NX08_011580 PF04055 Radical SAM superfamily NX08_011585 PF00334 Nucleoside diphosphate kinase NX08_011595 PF00378 Enoyl-CoA hydratase/isomerase NX08_011595 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NX08_011595 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NX08_011600 PF02803 Thiolase, C-terminal domain NX08_011600 PF00108 Thiolase, N-terminal domain NX08_011605 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NX08_011610 PF16193 AAA C-terminal domain NX08_011610 PF12002 MgsA AAA+ ATPase C terminal NX08_011610 PF00004 ATPase family associated with various cellular activities (AAA) NX08_011620 PF03548 Outer membrane lipoprotein carrier protein LolA NX08_011630 PF01580 FtsK/SpoIIIE family NX08_011630 PF09397 Ftsk gamma domain NX08_011630 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NX08_011630 PF17854 FtsK alpha domain NX08_011635 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_011645 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NX08_011650 PF01176 Translation initiation factor 1A / IF-1 NX08_011655 PF00004 ATPase family associated with various cellular activities (AAA) NX08_011655 PF10431 C-terminal, D2-small domain, of ClpB protein NX08_011655 PF07724 AAA domain (Cdc48 subfamily) NX08_011655 PF17871 AAA lid domain NX08_011655 PF02861 Clp amino terminal domain, pathogenicity island component NX08_011660 PF02617 ATP-dependent Clp protease adaptor protein ClpS NX08_011665 PF00293 NUDIX domain NX08_011675 PF04356 Protein of unknown function (DUF489) NX08_011685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_011685 PF00672 HAMP domain NX08_011685 PF12729 Four helix bundle sensory module for signal transduction NX08_011695 PF00563 EAL domain NX08_011695 PF03707 Bacterial signalling protein N terminal repeat NX08_011695 PF00990 Diguanylate cyclase, GGDEF domain NX08_011700 PF07730 Histidine kinase NX08_011700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_011705 PF00563 EAL domain NX08_011705 PF03707 Bacterial signalling protein N terminal repeat NX08_011705 PF00990 Diguanylate cyclase, GGDEF domain NX08_011710 PF13426 PAS domain NX08_011710 PF13188 PAS domain NX08_011710 PF00989 PAS fold NX08_011710 PF00512 His Kinase A (phospho-acceptor) domain NX08_011710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_011730 PF00072 Response regulator receiver domain NX08_011730 PF01584 CheW-like domain NX08_011740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NX08_011740 PF00460 Flagella basal body rod protein NX08_011745 PF03963 Flagellar hook capping protein - N-terminal region NX08_011750 PF07559 Flagellar basal body protein FlaE NX08_011750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NX08_011750 PF00460 Flagella basal body rod protein NX08_011755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NX08_011755 PF00460 Flagella basal body rod protein NX08_011770 PF00460 Flagella basal body rod protein NX08_011770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NX08_011775 PF02107 Flagellar L-ring protein NX08_011780 PF02119 Flagellar P-ring protein NX08_011785 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NX08_011785 PF10135 Rod binding protein NX08_011790 PF07196 Flagellin hook IN motif NX08_011790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NX08_011800 PF00700 Bacterial flagellin C-terminal helical region NX08_011800 PF00669 Bacterial flagellin N-terminal helical region NX08_011805 PF02465 Flagellar hook-associated protein 2 N-terminus NX08_011805 PF07195 Flagellar hook-associated protein 2 C-terminus NX08_011805 PF07196 Flagellin hook IN motif NX08_011810 PF02561 Flagellar protein FliS NX08_011825 PF00196 Bacterial regulatory proteins, luxR family NX08_011825 PF00072 Response regulator receiver domain NX08_011830 PF04963 Sigma-54 factor, core binding domain NX08_011830 PF04552 Sigma-54, DNA binding domain NX08_011830 PF00309 Sigma-54 factor, Activator interacting domain (AID) NX08_011835 PF01339 CheB methylesterase NX08_011835 PF00072 Response regulator receiver domain NX08_011840 PF00072 Response regulator receiver domain NX08_011840 PF02954 Bacterial regulatory protein, Fis family NX08_011840 PF00158 Sigma-54 interaction domain NX08_011845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NX08_011855 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NX08_011855 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NX08_011890 PF00534 Glycosyl transferases group 1 NX08_011890 PF00535 Glycosyl transferase family 2 NX08_011895 PF02049 Flagellar hook-basal body complex protein FliE NX08_011900 PF01514 Secretory protein of YscJ/FliF family NX08_011900 PF08345 Flagellar M-ring protein C-terminal NX08_011905 PF14842 FliG N-terminal domain NX08_011905 PF01706 FliG C-terminal domain NX08_011905 PF14841 FliG middle domain NX08_011915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NX08_011915 PF18269 T3SS EscN ATPase C-terminal domain NX08_011935 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NX08_011935 PF02154 Flagellar motor switch protein FliM NX08_011940 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NX08_011945 PF04347 Flagellar biosynthesis protein, FliO NX08_011950 PF00813 FliP family NX08_011960 PF01313 Bacterial export proteins, family 3 NX08_011965 PF01311 Bacterial export proteins, family 1 NX08_011970 PF13188 PAS domain NX08_011970 PF00990 Diguanylate cyclase, GGDEF domain NX08_011970 PF00563 EAL domain NX08_011970 PF03707 Bacterial signalling protein N terminal repeat NX08_011975 PF13188 PAS domain NX08_011975 PF03707 Bacterial signalling protein N terminal repeat NX08_011975 PF00990 Diguanylate cyclase, GGDEF domain NX08_011975 PF00563 EAL domain NX08_011980 PF00990 Diguanylate cyclase, GGDEF domain NX08_011980 PF03707 Bacterial signalling protein N terminal repeat NX08_011980 PF00563 EAL domain NX08_011985 PF01312 FlhB HrpN YscU SpaS Family NX08_011990 PF00771 FHIPEP family NX08_012000 PF00448 SRP54-type protein, GTPase domain NX08_012005 PF10609 NUBPL iron-transfer P-loop NTPase NX08_012010 PF04542 Sigma-70 region 2 NX08_012010 PF04545 Sigma-70, region 4 NX08_012010 PF04539 Sigma-70 region 3 NX08_012015 PF00072 Response regulator receiver domain NX08_012020 PF04344 Chemotaxis phosphatase, CheZ NX08_012025 PF07194 P2 response regulator binding domain NX08_012025 PF02895 Signal transducing histidine kinase, homodimeric domain NX08_012025 PF01584 CheW-like domain NX08_012025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_012025 PF01627 Hpt domain NX08_012085 PF01618 MotA/TolQ/ExbB proton channel family NX08_012090 PF13677 Membrane MotB of proton-channel complex MotA/MotB NX08_012090 PF00691 OmpA family NX08_012095 PF13614 AAA domain NX08_012100 PF01584 CheW-like domain NX08_012110 PF00072 Response regulator receiver domain NX08_012115 PF09078 CheY binding NX08_012115 PF01584 CheW-like domain NX08_012115 PF02895 Signal transducing histidine kinase, homodimeric domain NX08_012115 PF01627 Hpt domain NX08_012115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_012120 PF02203 Tar ligand binding domain homologue NX08_012120 PF00672 HAMP domain NX08_012120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_012125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_012140 PF00672 HAMP domain NX08_012140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_012140 PF02203 Tar ligand binding domain homologue NX08_012150 PF00672 HAMP domain NX08_012150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_012150 PF02203 Tar ligand binding domain homologue NX08_012155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_012155 PF00672 HAMP domain NX08_012155 PF02203 Tar ligand binding domain homologue NX08_012160 PF00672 HAMP domain NX08_012160 PF02203 Tar ligand binding domain homologue NX08_012160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_012165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_012165 PF02203 Tar ligand binding domain homologue NX08_012165 PF00672 HAMP domain NX08_012175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_012175 PF00672 HAMP domain NX08_012175 PF02203 Tar ligand binding domain homologue NX08_012180 PF00672 HAMP domain NX08_012180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_012180 PF02203 Tar ligand binding domain homologue NX08_012190 PF07317 Flagellar regulator YcgR NX08_012190 PF07238 PilZ domain NX08_012195 PF01584 CheW-like domain NX08_012205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_012210 PF03705 CheR methyltransferase, all-alpha domain NX08_012210 PF01739 CheR methyltransferase, SAM binding domain NX08_012215 PF03975 CheD chemotactic sensory transduction NX08_012220 PF01339 CheB methylesterase NX08_012220 PF00072 Response regulator receiver domain NX08_012225 PF00563 EAL domain NX08_012225 PF00990 Diguanylate cyclase, GGDEF domain NX08_012225 PF03707 Bacterial signalling protein N terminal repeat NX08_012230 PF00561 alpha/beta hydrolase fold NX08_012235 PF00330 Aconitase family (aconitate hydratase) NX08_012235 PF11791 Aconitate B N-terminal domain NX08_012235 PF06434 Aconitate hydratase 2 N-terminus NX08_012250 PF00330 Aconitase family (aconitate hydratase) NX08_012250 PF00694 Aconitase C-terminal domain NX08_012260 PF13193 AMP-binding enzyme C-terminal domain NX08_012260 PF00501 AMP-binding enzyme NX08_012270 PF05598 Transposase domain (DUF772) NX08_012270 PF01609 Transposase DDE domain NX08_012285 PF00378 Enoyl-CoA hydratase/isomerase NX08_012295 PF00512 His Kinase A (phospho-acceptor) domain NX08_012295 PF01627 Hpt domain NX08_012295 PF00072 Response regulator receiver domain NX08_012295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_012300 PF00072 Response regulator receiver domain NX08_012305 PF01336 OB-fold nucleic acid binding domain NX08_012305 PF00152 tRNA synthetases class II (D, K and N) NX08_012335 PF17768 RecJ OB domain NX08_012335 PF02272 DHHA1 domain NX08_012335 PF01368 DHH family NX08_012345 PF01272 Transcription elongation factor, GreA/GreB, C-term NX08_012345 PF03449 Transcription elongation factor, N-terminal NX08_012350 PF02142 MGS-like domain NX08_012350 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NX08_012350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NX08_012360 PF00117 Glutamine amidotransferase class-I NX08_012360 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NX08_012365 PF01113 Dihydrodipicolinate reductase, N-terminus NX08_012365 PF05173 Dihydrodipicolinate reductase, C-terminus NX08_012370 PF03473 MOSC domain NX08_012370 PF03475 3-alpha domain NX08_012375 PF00155 Aminotransferase class I and II NX08_012390 PF07664 Ferrous iron transport protein B C terminus NX08_012390 PF02421 Ferrous iron transport protein B NX08_012390 PF07670 Nucleoside recognition NX08_012400 PF00378 Enoyl-CoA hydratase/isomerase NX08_012410 PF00682 HMGL-like NX08_012415 PF00106 short chain dehydrogenase NX08_012420 PF08207 Elongation factor P (EF-P) KOW-like domain NX08_012420 PF09285 Elongation factor P, C-terminal NX08_012420 PF01132 Elongation factor P (EF-P) OB domain NX08_012440 PF02913 FAD linked oxidases, C-terminal domain NX08_012440 PF01565 FAD binding domain NX08_012445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NX08_012445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NX08_012460 PF13520 Amino acid permease NX08_012465 PF00596 Class II Aldolase and Adducin N-terminal domain NX08_012470 PF03079 ARD/ARD' family NX08_012500 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NX08_012500 PF01502 Phosphoribosyl-AMP cyclohydrolase NX08_012505 PF00977 Histidine biosynthesis protein NX08_012510 PF00977 Histidine biosynthesis protein NX08_012515 PF00117 Glutamine amidotransferase class-I NX08_012520 PF00475 Imidazoleglycerol-phosphate dehydratase NX08_012525 PF00155 Aminotransferase class I and II NX08_012530 PF00815 Histidinol dehydrogenase NX08_012535 PF01634 ATP phosphoribosyltransferase NX08_012535 PF08029 HisG, C-terminal domain NX08_012545 PF13393 Histidyl-tRNA synthetase NX08_012545 PF03129 Anticodon binding domain NX08_012550 PF13545 Crp-like helix-turn-helix domain NX08_012550 PF00027 Cyclic nucleotide-binding domain NX08_012560 PF00291 Pyridoxal-phosphate dependent enzyme NX08_012560 PF14821 Threonine synthase N terminus NX08_012570 PF08544 GHMP kinases C terminal NX08_012570 PF00288 GHMP kinases N terminal domain NX08_012575 PF03447 Homoserine dehydrogenase, NAD binding domain NX08_012575 PF00742 Homoserine dehydrogenase NX08_012575 PF13840 ACT domain NX08_012575 PF01842 ACT domain NX08_012575 PF00696 Amino acid kinase family NX08_012600 PF00664 ABC transporter transmembrane region NX08_012600 PF00005 ABC transporter NX08_012600 PF03412 Peptidase C39 family NX08_012665 PF01381 Helix-turn-helix NX08_012720 PF00665 Integrase core domain NX08_012805 PF02534 Type IV secretory system Conjugative DNA transfer NX08_012880 PF05114 Protein of unknown function (DUF692) NX08_012895 PF02666 Phosphatidylserine decarboxylase NX08_012900 PF04002 RadC-like JAB domain NX08_012960 PF00171 Aldehyde dehydrogenase family NX08_012975 PF01180 Dihydroorotate dehydrogenase NX08_012980 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NX08_012980 PF01565 FAD binding domain NX08_012985 PF00892 EamA-like transporter family NX08_012995 PF01177 Asp/Glu/Hydantoin racemase NX08_013010 PF01569 PAP2 superfamily NX08_013015 PF04551 GcpE protein NX08_013025 PF00072 Response regulator receiver domain NX08_013030 PF00150 Cellulase (glycosyl hydrolase family 5) NX08_013030 PF02013 Cellulose or protein binding domain NX08_013035 PF03707 Bacterial signalling protein N terminal repeat NX08_013035 PF00563 EAL domain NX08_013035 PF00990 Diguanylate cyclase, GGDEF domain NX08_013045 PF00474 Sodium:solute symporter family NX08_013055 PF14310 Fibronectin type III-like domain NX08_013055 PF00933 Glycosyl hydrolase family 3 N terminal domain NX08_013055 PF01915 Glycosyl hydrolase family 3 C-terminal domain NX08_013075 PF00342 Phosphoglucose isomerase NX08_013080 PF02261 Aspartate decarboxylase NX08_013085 PF02569 Pantoate-beta-alanine ligase NX08_013090 PF02548 Ketopantoate hydroxymethyltransferase NX08_013095 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NX08_013100 PF01743 Poly A polymerase head domain NX08_013100 PF12626 Polymerase A arginine-rich C-terminus NX08_013100 PF12627 Probable RNA and SrmB- binding site of polymerase A NX08_013115 PF02649 Type I GTP cyclohydrolase folE2 NX08_013145 PF00083 Sugar (and other) transporter NX08_013155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NX08_013155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NX08_013165 PF16338 Domain of unknown function (DUF4968) NX08_013165 PF01055 Glycosyl hydrolases family 31 NX08_013165 PF17137 Domain of unknown function (DUF5110) NX08_013180 PF00942 Cellulose binding domain NX08_013180 PF03442 Carbohydrate binding domain X2 NX08_013220 PF03466 LysR substrate binding domain NX08_013220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_013225 PF01081 KDPG and KHG aldolase NX08_013230 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NX08_013230 PF13378 Enolase C-terminal domain-like NX08_013235 PF08450 SMP-30/Gluconolactonase/LRE-like region NX08_013240 PF05035 2-keto-3-deoxy-galactonokinase NX08_013245 PF11953 Domain of unknown function (DUF3470) NX08_013245 PF00037 4Fe-4S binding domain NX08_013255 PF00701 Dihydrodipicolinate synthetase family NX08_013270 PF00578 AhpC/TSA family NX08_013275 PF02562 PhoH-like protein NX08_013275 PF13638 PIN domain NX08_013290 PF08543 Phosphomethylpyrimidine kinase NX08_013290 PF02581 Thiamine monophosphate synthase NX08_013315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_013315 PF03466 LysR substrate binding domain NX08_013320 PF17954 Quercetinase C-terminal cupin domain NX08_013320 PF02678 Pirin NX08_013325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_013325 PF08447 PAS fold NX08_013325 PF13426 PAS domain NX08_013340 PF02599 Global regulator protein family NX08_013345 PF01411 tRNA synthetases class II (A) NX08_013345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NX08_013345 PF02272 DHHA1 domain NX08_013350 PF02631 RecX family NX08_013355 PF00154 recA bacterial DNA recombination protein NX08_013360 PF00717 Peptidase S24-like NX08_013360 PF01726 LexA DNA binding domain NX08_013365 PF03109 ABC1 family NX08_013370 PF02464 Competence-damaged protein NX08_013375 PF16360 GTP-binding GTPase Middle Region NX08_013375 PF13167 GTP-binding GTPase N-terminal NX08_013375 PF01926 50S ribosome-binding GTPase NX08_013380 PF17209 Hfq protein NX08_013390 PF00809 Pterin binding enzyme NX08_013395 PF17862 AAA+ lid domain NX08_013395 PF00004 ATPase family associated with various cellular activities (AAA) NX08_013395 PF01434 Peptidase family M41 NX08_013395 PF06480 FtsH Extracellular NX08_013400 PF01728 FtsJ-like methyltransferase NX08_013405 PF01985 CRS1 / YhbY (CRM) domain NX08_013410 PF04430 Protein of unknown function (DUF498/DUF598) NX08_013415 PF01551 Peptidase family M23 NX08_013415 PF01476 LysM domain NX08_013420 PF09335 SNARE associated Golgi protein NX08_013430 PF01975 Survival protein SurE NX08_013435 PF01713 Smr domain NX08_013440 PF01142 tRNA pseudouridine synthase D (TruD) NX08_013445 PF02542 YgbB family NX08_013450 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NX08_013455 PF04977 Septum formation initiator NX08_013460 PF00113 Enolase, C-terminal TIM barrel domain NX08_013460 PF03952 Enolase, N-terminal domain NX08_013470 PF00793 DAHP synthetase I family NX08_013475 PF00132 Bacterial transferase hexapeptide (six repeats) NX08_013480 PF06418 CTP synthase N-terminus NX08_013480 PF00117 Glutamine amidotransferase class-I NX08_013490 PF00204 DNA gyrase B NX08_013490 PF00986 DNA gyrase B subunit, carboxyl terminus NX08_013490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_013490 PF01751 Toprim domain NX08_013525 PF03135 CagE, TrbE, VirB family, component of type IV transporter system NX08_013530 PF05101 Type IV secretory pathway, VirB3-like protein NX08_013540 PF01464 Transglycosylase SLT domain NX08_013545 PF00437 Type II/IV secretion system protein NX08_013550 PF03743 Bacterial conjugation TrbI-like protein NX08_013570 PF02534 Type IV secretory system Conjugative DNA transfer NX08_013585 PF02151 UvrB/uvrC motif NX08_013585 PF12344 Ultra-violet resistance protein B NX08_013585 PF00271 Helicase conserved C-terminal domain NX08_013585 PF17757 UvrB interaction domain NX08_013585 PF04851 Type III restriction enzyme, res subunit NX08_013590 PF00114 Pilin (bacterial filament) NX08_013590 PF07963 Prokaryotic N-terminal methylation motif NX08_013605 PF05567 Neisseria PilC beta-propeller domain NX08_013625 PF12019 Type II transport protein GspH NX08_013625 PF07963 Prokaryotic N-terminal methylation motif NX08_013630 PF03641 Possible lysine decarboxylase NX08_013630 PF11892 Domain of unknown function (DUF3412) NX08_013630 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NX08_013635 PF00593 TonB dependent receptor NX08_013640 PF01914 MarC family integral membrane protein NX08_013650 PF00462 Glutaredoxin NX08_013655 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NX08_013655 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NX08_013660 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NX08_013660 PF02222 ATP-grasp domain NX08_013665 PF00731 AIR carboxylase NX08_013675 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NX08_013675 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NX08_013685 PF03725 3' exoribonuclease family, domain 2 NX08_013685 PF00013 KH domain NX08_013685 PF01138 3' exoribonuclease family, domain 1 NX08_013685 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NX08_013685 PF00575 S1 RNA binding domain NX08_013690 PF00312 Ribosomal protein S15 NX08_013695 PF01509 TruB family pseudouridylate synthase (N terminal domain) NX08_013695 PF16198 tRNA pseudouridylate synthase B C-terminal domain NX08_013695 PF09157 Pseudouridine synthase II TruB, C-terminal NX08_013700 PF02033 Ribosome-binding factor A NX08_013705 PF00009 Elongation factor Tu GTP binding domain NX08_013705 PF11987 Translation-initiation factor 2 NX08_013705 PF08364 Bacterial translation initiation factor IF-2 associated region NX08_013705 PF04760 Translation initiation factor IF-2, N-terminal region NX08_013710 PF00575 S1 RNA binding domain NX08_013710 PF08529 NusA N-terminal domain NX08_013710 PF13184 NusA-like KH domain NX08_013715 PF17384 RimP C-terminal SH3 domain NX08_013715 PF02576 RimP N-terminal domain NX08_013725 PF00361 Proton-conducting membrane transporter NX08_013730 PF00361 Proton-conducting membrane transporter NX08_013730 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus NX08_013735 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NX08_013735 PF00361 Proton-conducting membrane transporter NX08_013740 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NX08_013745 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NX08_013750 PF12838 4Fe-4S dicluster domain NX08_013755 PF00146 NADH dehydrogenase NX08_013760 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NX08_013760 PF00384 Molybdopterin oxidoreductase NX08_013760 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal NX08_013765 PF10531 SLBB domain NX08_013765 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NX08_013765 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NX08_013775 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NX08_013780 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NX08_013785 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NX08_013790 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NX08_013805 PF00121 Triosephosphate isomerase NX08_013865 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NX08_013865 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NX08_013865 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NX08_013865 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NX08_013870 PF01039 Carboxyl transferase domain NX08_013870 PF17848 Acetyl-coA carboxylase zinc finger domain NX08_013880 PF00290 Tryptophan synthase alpha chain NX08_013890 PF00291 Pyridoxal-phosphate dependent enzyme NX08_013895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_013895 PF03466 LysR substrate binding domain NX08_013900 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NX08_013905 PF01416 tRNA pseudouridine synthase NX08_013925 PF01118 Semialdehyde dehydrogenase, NAD binding domain NX08_013925 PF02774 Semialdehyde dehydrogenase, dimerisation domain NX08_013930 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NX08_013930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NX08_013935 PF01264 Chorismate synthase NX08_013940 PF05175 Methyltransferase small domain NX08_013945 PF02630 SCO1/SenC NX08_013950 PF02666 Phosphatidylserine decarboxylase NX08_013955 PF02666 Phosphatidylserine decarboxylase NX08_013965 PF05872 Bacterial protein of unknown function (DUF853) NX08_013995 PF01272 Transcription elongation factor, GreA/GreB, C-term NX08_013995 PF03449 Transcription elongation factor, N-terminal NX08_014015 PF18693 TRAM domain NX08_014015 PF04055 Radical SAM superfamily NX08_014015 PF00919 Uncharacterized protein family UPF0004 NX08_014020 PF01738 Dienelactone hydrolase family NX08_014050 PF00692 dUTPase NX08_014060 PF10609 NUBPL iron-transfer P-loop NTPase NX08_014080 PF01431 Peptidase family M13 NX08_014080 PF05649 Peptidase family M13 NX08_014085 PF05649 Peptidase family M13 NX08_014085 PF01431 Peptidase family M13 NX08_014105 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_014105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NX08_014110 PF01266 FAD dependent oxidoreductase NX08_014115 PF04235 Protein of unknown function (DUF418) NX08_014120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NX08_014125 PF00877 NlpC/P60 family NX08_014130 PF00877 NlpC/P60 family NX08_014140 PF13649 Methyltransferase domain NX08_014145 PF00375 Sodium:dicarboxylate symporter family NX08_014150 PF00245 Alkaline phosphatase NX08_014155 PF01171 PP-loop family NX08_014155 PF09179 TilS substrate binding domain NX08_014155 PF11734 TilS substrate C-terminal domain NX08_014160 PF02609 Exonuclease VII small subunit NX08_014165 PF00348 Polyprenyl synthetase NX08_014170 PF14521 Lysine-specific metallo-endopeptidase NX08_014180 PF01523 Putative modulator of DNA gyrase NX08_014185 PF04751 Protein of unknown function (DUF615) NX08_014190 PF01523 Putative modulator of DNA gyrase NX08_014205 PF13502 AsmA-like C-terminal region NX08_014205 PF13116 Protein of unknown function NX08_014210 PF10150 Ribonuclease E/G family NX08_014210 PF00575 S1 RNA binding domain NX08_014215 PF02545 Maf-like protein NX08_014220 PF04402 Protein of unknown function (DUF541) NX08_014235 PF02590 Predicted SPOUT methyltransferase NX08_014255 PF01467 Cytidylyltransferase-like NX08_014275 PF13603 Leucyl-tRNA synthetase, Domain 2 NX08_014275 PF00133 tRNA synthetases class I (I, L, M and V) NX08_014275 PF08264 Anticodon-binding domain of tRNA NX08_014285 PF00085 Thioredoxin NX08_014300 PF04070 Domain of unknown function (DUF378) NX08_014360 PF00664 ABC transporter transmembrane region NX08_014360 PF00005 ABC transporter NX08_014370 PF00873 AcrB/AcrD/AcrF family NX08_014385 PF02321 Outer membrane efflux protein NX08_014390 PF00486 Transcriptional regulatory protein, C terminal NX08_014390 PF00072 Response regulator receiver domain NX08_014395 PF00672 HAMP domain NX08_014395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_014395 PF00512 His Kinase A (phospho-acceptor) domain NX08_014400 PF00999 Sodium/hydrogen exchanger family NX08_014405 PF00144 Beta-lactamase NX08_014410 PF03737 Aldolase/RraA NX08_014440 PF00849 RNA pseudouridylate synthase NX08_014440 PF01479 S4 domain NX08_014445 PF00990 Diguanylate cyclase, GGDEF domain NX08_014445 PF08448 PAS fold NX08_014445 PF00563 EAL domain NX08_014450 PF00271 Helicase conserved C-terminal domain NX08_014450 PF03880 DbpA RNA binding domain NX08_014450 PF00270 DEAD/DEAH box helicase NX08_014455 PF04545 Sigma-70, region 4 NX08_014455 PF04539 Sigma-70 region 3 NX08_014455 PF04542 Sigma-70 region 2 NX08_014500 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NX08_014500 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NX08_014510 PF00654 Voltage gated chloride channel NX08_014515 PF00107 Zinc-binding dehydrogenase NX08_014515 PF08240 Alcohol dehydrogenase GroES-like domain NX08_014530 PF07715 TonB-dependent Receptor Plug Domain NX08_014530 PF00593 TonB dependent receptor NX08_014540 PF01483 Proprotein convertase P-domain NX08_014540 PF00082 Subtilase family NX08_014555 PF00248 Aldo/keto reductase family NX08_014560 PF07690 Major Facilitator Superfamily NX08_014565 PF03466 LysR substrate binding domain NX08_014565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_014580 PF06719 AraC-type transcriptional regulator N-terminus NX08_014580 PF12833 Helix-turn-helix domain NX08_014615 PF00202 Aminotransferase class-III NX08_014645 PF02321 Outer membrane efflux protein NX08_014650 PF00873 AcrB/AcrD/AcrF family NX08_014655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NX08_014655 PF00529 HlyD membrane-fusion protein of T1SS NX08_014665 PF01475 Ferric uptake regulator family NX08_014670 PF00749 tRNA synthetases class I (E and Q), catalytic domain NX08_014680 PF00795 Carbon-nitrogen hydrolase NX08_014695 PF06123 Inner membrane protein CreD NX08_014705 PF00512 His Kinase A (phospho-acceptor) domain NX08_014705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_014705 PF00672 HAMP domain NX08_014715 PF00486 Transcriptional regulatory protein, C terminal NX08_014715 PF00072 Response regulator receiver domain NX08_014720 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NX08_014730 PF17757 UvrB interaction domain NX08_014730 PF03461 TRCF domain NX08_014730 PF02559 CarD-like/TRCF domain NX08_014730 PF00271 Helicase conserved C-terminal domain NX08_014730 PF00270 DEAD/DEAH box helicase NX08_014760 PF04610 TrbL/VirB6 plasmid conjugal transfer protein NX08_014785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_014785 PF02895 Signal transducing histidine kinase, homodimeric domain NX08_014785 PF09078 CheY binding NX08_014785 PF01584 CheW-like domain NX08_014785 PF01627 Hpt domain NX08_014790 PF00672 HAMP domain NX08_014790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_014790 PF02203 Tar ligand binding domain homologue NX08_014795 PF01584 CheW-like domain NX08_014800 PF00563 EAL domain NX08_014800 PF00990 Diguanylate cyclase, GGDEF domain NX08_014800 PF03707 Bacterial signalling protein N terminal repeat NX08_014805 PF01739 CheR methyltransferase, SAM binding domain NX08_014805 PF03705 CheR methyltransferase, all-alpha domain NX08_014810 PF01339 CheB methylesterase NX08_014810 PF00072 Response regulator receiver domain NX08_014815 PF13091 PLD-like domain NX08_014820 PF05649 Peptidase family M13 NX08_014820 PF01431 Peptidase family M13 NX08_014830 PF00300 Histidine phosphatase superfamily (branch 1) NX08_014835 PF04493 Endonuclease V NX08_014840 PF02678 Pirin NX08_014840 PF05726 Pirin C-terminal cupin domain NX08_014860 PF02678 Pirin NX08_014860 PF05726 Pirin C-terminal cupin domain NX08_014865 PF13722 5TM C-terminal transporter carbon starvation CstA NX08_014865 PF02554 Carbon starvation protein CstA NX08_014870 PF04328 Selenoprotein, putative NX08_014910 PF13478 XdhC Rossmann domain NX08_014910 PF02625 XdhC and CoxI family NX08_014915 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NX08_014915 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NX08_014935 PF01799 [2Fe-2S] binding domain NX08_014935 PF10518 TAT (twin-arginine translocation) pathway signal sequence NX08_014935 PF00111 2Fe-2S iron-sulfur cluster binding domain NX08_014940 PF00550 Phosphopantetheine attachment site NX08_014940 PF14765 Polyketide synthase dehydratase NX08_014940 PF08240 Alcohol dehydrogenase GroES-like domain NX08_014940 PF16197 Ketoacyl-synthetase C-terminal extension NX08_014940 PF00107 Zinc-binding dehydrogenase NX08_014940 PF00698 Acyl transferase domain NX08_014940 PF08659 KR domain NX08_014940 PF02801 Beta-ketoacyl synthase, C-terminal domain NX08_014940 PF00109 Beta-ketoacyl synthase, N-terminal domain NX08_014945 PF00563 EAL domain NX08_014945 PF01590 GAF domain NX08_014945 PF00990 Diguanylate cyclase, GGDEF domain NX08_014945 PF00360 Phytochrome region NX08_014950 PF00436 Single-strand binding protein family NX08_014955 PF00348 Polyprenyl synthetase NX08_014965 PF08245 Mur ligase middle domain NX08_014980 PF00696 Amino acid kinase family NX08_014980 PF01842 ACT domain NX08_014985 PF02567 Phenazine biosynthesis-like protein NX08_014990 PF02567 Phenazine biosynthesis-like protein NX08_015000 PF02566 OsmC-like protein NX08_015015 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NX08_015015 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NX08_015020 PF03652 Holliday junction resolvase NX08_015025 PF02622 Uncharacterized ACR, COG1678 NX08_015030 PF00958 GMP synthase C terminal domain NX08_015030 PF13673 Acetyltransferase (GNAT) domain NX08_015030 PF13302 Acetyltransferase (GNAT) domain NX08_015030 PF03352 Methyladenine glycosylase NX08_015030 PF00117 Glutamine amidotransferase class-I NX08_015055 PF00437 Type II/IV secretion system protein NX08_015060 PF00437 Type II/IV secretion system protein NX08_015065 PF01168 Alanine racemase, N-terminal domain NX08_015070 PF03807 NADP oxidoreductase coenzyme F420-dependent NX08_015070 PF14748 Pyrroline-5-carboxylate reductase dimerisation NX08_015080 PF01476 LysM domain NX08_015080 PF01551 Peptidase family M23 NX08_015100 PF01965 DJ-1/PfpI family NX08_015110 PF02082 Transcriptional regulator NX08_015115 PF01458 Uncharacterized protein family (UPF0051) NX08_015120 PF00005 ABC transporter NX08_015125 PF01458 Uncharacterized protein family (UPF0051) NX08_015130 PF00266 Aminotransferase class-V NX08_015145 PF00355 Rieske [2Fe-2S] domain NX08_015150 PF00593 TonB dependent receptor NX08_015150 PF07715 TonB-dependent Receptor Plug Domain NX08_015155 PF13640 2OG-Fe(II) oxygenase superfamily NX08_015155 PF18331 PKHD-type hydroxylase C-terminal domain NX08_015180 PF02424 ApbE family NX08_015185 PF00258 Flavodoxin NX08_015185 PF00175 Oxidoreductase NAD-binding domain NX08_015185 PF00667 FAD binding domain NX08_015190 PF05962 HutD NX08_015200 PF07687 Peptidase dimerisation domain NX08_015200 PF01546 Peptidase family M20/M25/M40 NX08_015210 PF01636 Phosphotransferase enzyme family NX08_015215 PF00483 Nucleotidyl transferase NX08_015225 PF00308 Bacterial dnaA protein NX08_015230 PF01594 AI-2E family transporter NX08_015240 PF02769 AIR synthase related protein, C-terminal domain NX08_015240 PF00586 AIR synthase related protein, N-terminal domain NX08_015250 PF00551 Formyl transferase NX08_015275 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NX08_015280 PF01722 BolA-like protein NX08_015285 PF01380 SIS domain NX08_015285 PF00571 CBS domain NX08_015300 PF03968 OstA-like protein NX08_015305 PF00005 ABC transporter NX08_015310 PF04552 Sigma-54, DNA binding domain NX08_015310 PF04963 Sigma-54 factor, core binding domain NX08_015310 PF00309 Sigma-54 factor, Activator interacting domain (AID) NX08_015315 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NX08_015320 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NX08_015325 PF07475 HPr Serine kinase C-terminal domain NX08_015325 PF02603 HPr Serine kinase N terminus NX08_015330 PF03668 P-loop ATPase protein family NX08_015340 PF00381 PTS HPr component phosphorylation site NX08_015345 PF02896 PEP-utilising enzyme, TIM barrel domain NX08_015345 PF00391 PEP-utilising enzyme, mobile domain NX08_015345 PF05524 PEP-utilising enzyme, N-terminal NX08_015355 PF00571 CBS domain NX08_015355 PF03448 MgtE intracellular N domain NX08_015355 PF01769 Divalent cation transporter NX08_015360 PF00756 Putative esterase NX08_015370 PF02322 Cytochrome bd terminal oxidase subunit II NX08_015375 PF01654 Cytochrome bd terminal oxidase subunit I NX08_015385 PF00324 Amino acid permease NX08_015405 PF00561 alpha/beta hydrolase fold NX08_015410 PF00196 Bacterial regulatory proteins, luxR family NX08_015415 PF00324 Amino acid permease NX08_015420 PF02796 Helix-turn-helix domain of resolvase NX08_015420 PF00239 Resolvase, N terminal domain NX08_015425 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA NX08_015430 PF01936 NYN domain NX08_015430 PF09722 Protein of unknown function (DUF2384) NX08_015445 PF12706 Beta-lactamase superfamily domain NX08_015475 PF09278 MerR, DNA binding NX08_015475 PF00376 MerR family regulatory protein NX08_015480 PF07690 Major Facilitator Superfamily NX08_015490 PF03738 Glutathionylspermidine synthase preATP-grasp NX08_015515 PF04012 PspA/IM30 family NX08_015525 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NX08_015525 PF01243 Pyridoxamine 5'-phosphate oxidase NX08_015530 PF01202 Shikimate kinase NX08_015535 PF01761 3-dehydroquinate synthase NX08_015550 PF01208 Uroporphyrinogen decarboxylase (URO-D) NX08_015560 PF00072 Response regulator receiver domain NX08_015560 PF01627 Hpt domain NX08_015560 PF00672 HAMP domain NX08_015560 PF17149 Periplasmic sensor domain found in signal transduction proteins NX08_015560 PF00512 His Kinase A (phospho-acceptor) domain NX08_015560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_015565 PF01627 Hpt domain NX08_015565 PF00512 His Kinase A (phospho-acceptor) domain NX08_015565 PF00672 HAMP domain NX08_015565 PF17149 Periplasmic sensor domain found in signal transduction proteins NX08_015565 PF00072 Response regulator receiver domain NX08_015565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_015580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_015580 PF00072 Response regulator receiver domain NX08_015580 PF00512 His Kinase A (phospho-acceptor) domain NX08_015580 PF09308 LuxQ, periplasmic NX08_015590 PF04264 YceI-like domain NX08_015620 PF03313 Serine dehydratase alpha chain NX08_015620 PF03315 Serine dehydratase beta chain NX08_015625 PF12697 Alpha/beta hydrolase family NX08_015630 PF03447 Homoserine dehydrogenase, NAD binding domain NX08_015630 PF00696 Amino acid kinase family NX08_015630 PF00742 Homoserine dehydrogenase NX08_015635 PF01053 Cys/Met metabolism PLP-dependent enzyme NX08_015640 PF00561 alpha/beta hydrolase fold NX08_015645 PF01551 Peptidase family M23 NX08_015650 PF00009 Elongation factor Tu GTP binding domain NX08_015650 PF16658 Class II release factor RF3, C-terminal domain NX08_015655 PF03006 Haemolysin-III related NX08_015660 PF05170 AsmA family NX08_015670 PF00535 Glycosyl transferase family 2 NX08_015675 PF00912 Transglycosylase NX08_015680 PF01430 Hsp33 protein NX08_015690 PF00593 TonB dependent receptor NX08_015690 PF07715 TonB-dependent Receptor Plug Domain NX08_015695 PF00440 Bacterial regulatory proteins, tetR family NX08_015700 PF00561 alpha/beta hydrolase fold NX08_015705 PF09317 Domain of unknown function (DUF1974) NX08_015705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NX08_015705 PF02770 Acyl-CoA dehydrogenase, middle domain NX08_015705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NX08_015740 PF01597 Glycine cleavage H-protein NX08_015745 PF01571 Aminomethyltransferase folate-binding domain NX08_015745 PF08669 Glycine cleavage T-protein C-terminal barrel domain NX08_015760 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NX08_015765 PF03819 MazG nucleotide pyrophosphohydrolase domain NX08_015770 PF00459 Inositol monophosphatase family NX08_015775 PF00293 NUDIX domain NX08_015780 PF00202 Aminotransferase class-III NX08_015785 PF04452 RNA methyltransferase NX08_015790 PF02685 Glucokinase NX08_015805 PF00704 Glycosyl hydrolases family 18 NX08_015805 PF01476 LysM domain NX08_015840 PF00933 Glycosyl hydrolase family 3 N terminal domain NX08_015840 PF14310 Fibronectin type III-like domain NX08_015840 PF07691 PA14 domain NX08_015840 PF01915 Glycosyl hydrolase family 3 C-terminal domain NX08_015845 PF03412 Peptidase C39 family NX08_015845 PF00005 ABC transporter NX08_015845 PF00664 ABC transporter transmembrane region NX08_015900 PF07971 Glycosyl hydrolase family 92 NX08_015900 PF17678 Glycosyl hydrolase family 92 N-terminal domain NX08_015905 PF01301 Glycosyl hydrolases family 35 NX08_015950 PF03932 CutC family NX08_015955 PF01112 Asparaginase NX08_015970 PF13302 Acetyltransferase (GNAT) domain NX08_015985 PF01339 CheB methylesterase NX08_015985 PF00072 Response regulator receiver domain NX08_015990 PF01584 CheW-like domain NX08_015990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_015990 PF01627 Hpt domain NX08_015990 PF00072 Response regulator receiver domain NX08_015995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_015995 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NX08_016000 PF01584 CheW-like domain NX08_016005 PF00072 Response regulator receiver domain NX08_016010 PF00072 Response regulator receiver domain NX08_016015 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NX08_016015 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NX08_016025 PF03747 ADP-ribosylglycohydrolase NX08_016030 PF00814 Glycoprotease family NX08_016035 PF13307 Helicase C-terminal domain NX08_016035 PF04851 Type III restriction enzyme, res subunit NX08_016045 PF00912 Transglycosylase NX08_016045 PF00905 Penicillin binding protein transpeptidase domain NX08_016045 PF14814 Bifunctional transglycosylase second domain NX08_016055 PF00535 Glycosyl transferase family 2 NX08_016070 PF04607 Region found in RelA / SpoT proteins NX08_016070 PF02824 TGS domain NX08_016070 PF13291 ACT domain NX08_016075 PF08042 PqqA family NX08_016080 PF12706 Beta-lactamase superfamily domain NX08_016085 PF03070 TENA/THI-4/PQQC family NX08_016090 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NX08_016095 PF13186 Iron-sulfur cluster-binding domain NX08_016095 PF04055 Radical SAM superfamily NX08_016115 PF02685 Glucokinase NX08_016130 PF00271 Helicase conserved C-terminal domain NX08_016130 PF04408 Helicase associated domain (HA2) NX08_016130 PF11898 Domain of unknown function (DUF3418) NX08_016130 PF00270 DEAD/DEAH box helicase NX08_016130 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NX08_016135 PF00210 Ferritin-like domain NX08_016145 PF00270 DEAD/DEAH box helicase NX08_016145 PF00271 Helicase conserved C-terminal domain NX08_016145 PF16124 RecQ zinc-binding NX08_016145 PF09382 RQC domain NX08_016145 PF00570 HRDC domain NX08_016180 PF00849 RNA pseudouridylate synthase NX08_016180 PF01479 S4 domain NX08_016210 PF06508 Queuosine biosynthesis protein QueC NX08_016390 PF03421 YopJ Serine/Threonine acetyltransferase NX08_016465 PF01555 DNA methylase NX08_016500 PF04055 Radical SAM superfamily NX08_016510 PF00691 OmpA family NX08_016515 PF07676 WD40-like Beta Propeller Repeat NX08_016515 PF04052 TolB amino-terminal domain NX08_016525 PF02472 Biopolymer transport protein ExbD/TolR NX08_016530 PF01618 MotA/TolQ/ExbB proton channel family NX08_016535 PF03061 Thioesterase superfamily NX08_016540 PF17864 RuvB AAA lid domain NX08_016540 PF05491 RuvB C-terminal winged helix domain NX08_016540 PF05496 Holliday junction DNA helicase RuvB P-loop domain NX08_016545 PF02705 K+ potassium transporter NX08_016550 PF07499 RuvA, C-terminal domain NX08_016550 PF01330 RuvA N terminal domain NX08_016555 PF02075 Crossover junction endodeoxyribonuclease RuvC NX08_016560 PF01709 Transcriptional regulator NX08_016575 PF00152 tRNA synthetases class II (D, K and N) NX08_016575 PF02938 GAD domain NX08_016575 PF01336 OB-fold nucleic acid binding domain NX08_016595 PF07690 Major Facilitator Superfamily NX08_016630 PF01053 Cys/Met metabolism PLP-dependent enzyme NX08_016640 PF07722 Peptidase C26 NX08_016645 PF01810 LysE type translocator NX08_016650 PF04204 Homoserine O-succinyltransferase NX08_016655 PF00120 Glutamine synthetase, catalytic domain NX08_016680 PF04185 Phosphoesterase family NX08_016680 PF05506 Domain of unknown function (DUF756) NX08_016700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_016700 PF03466 LysR substrate binding domain NX08_016710 PF00005 ABC transporter NX08_016710 PF12848 ABC transporter NX08_016715 PF00593 TonB dependent receptor NX08_016715 PF07715 TonB-dependent Receptor Plug Domain NX08_016730 PF07715 TonB-dependent Receptor Plug Domain NX08_016730 PF00593 TonB dependent receptor NX08_016735 PF07715 TonB-dependent Receptor Plug Domain NX08_016735 PF00593 TonB dependent receptor NX08_016750 PF02254 TrkA-N domain NX08_016750 PF00999 Sodium/hydrogen exchanger family NX08_016760 PF00593 TonB dependent receptor NX08_016760 PF07660 Secretin and TonB N terminus short domain NX08_016760 PF07715 TonB-dependent Receptor Plug Domain NX08_016770 PF06276 Ferric iron reductase FhuF-like transporter NX08_016770 PF04183 IucA / IucC family NX08_016775 PF07690 Major Facilitator Superfamily NX08_016785 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NX08_016785 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NX08_016805 PF07715 TonB-dependent Receptor Plug Domain NX08_016805 PF00593 TonB dependent receptor NX08_016825 PF02861 Clp amino terminal domain, pathogenicity island component NX08_016825 PF00004 ATPase family associated with various cellular activities (AAA) NX08_016825 PF07724 AAA domain (Cdc48 subfamily) NX08_016825 PF17871 AAA lid domain NX08_016825 PF10431 C-terminal, D2-small domain, of ClpB protein NX08_016830 PF00005 ABC transporter NX08_016835 PF00528 Binding-protein-dependent transport system inner membrane component NX08_016840 PF09084 NMT1/THI5 like NX08_016855 PF00593 TonB dependent receptor NX08_016855 PF07715 TonB-dependent Receptor Plug Domain NX08_016860 PF01541 GIY-YIG catalytic domain NX08_016900 PF00593 TonB dependent receptor NX08_016900 PF07715 TonB-dependent Receptor Plug Domain NX08_016910 PF02358 Trehalose-phosphatase NX08_016915 PF00723 Glycosyl hydrolases family 15 NX08_016920 PF00982 Glycosyltransferase family 20 NX08_016925 PF01011 PQQ enzyme repeat NX08_016930 PF02203 Tar ligand binding domain homologue NX08_016930 PF00672 HAMP domain NX08_016930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_016935 PF04134 Protein of unknown function, DUF393 NX08_016950 PF00849 RNA pseudouridylate synthase NX08_016955 PF13525 Outer membrane lipoprotein NX08_016960 PF00795 Carbon-nitrogen hydrolase NX08_016960 PF02540 NAD synthase NX08_016975 PF02629 CoA binding domain NX08_016975 PF00549 CoA-ligase NX08_016980 PF08442 ATP-grasp domain NX08_016980 PF00549 CoA-ligase NX08_016985 PF00512 His Kinase A (phospho-acceptor) domain NX08_016985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_016990 PF02954 Bacterial regulatory protein, Fis family NX08_016990 PF00072 Response regulator receiver domain NX08_016990 PF00158 Sigma-54 interaction domain NX08_016995 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NX08_016995 PF00437 Type II/IV secretion system protein NX08_017000 PF00114 Pilin (bacterial filament) NX08_017000 PF07963 Prokaryotic N-terminal methylation motif NX08_017005 PF00114 Pilin (bacterial filament) NX08_017005 PF07963 Prokaryotic N-terminal methylation motif NX08_017010 PF00482 Type II secretion system (T2SS), protein F NX08_017015 PF01478 Type IV leader peptidase family NX08_017015 PF06750 Bacterial Peptidase A24 N-terminal domain NX08_017020 PF01121 Dephospho-CoA kinase NX08_017025 PF11808 Phosphate regulon sensor protein PhoR NX08_017025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_017025 PF00512 His Kinase A (phospho-acceptor) domain NX08_017025 PF00989 PAS fold NX08_017030 PF00072 Response regulator receiver domain NX08_017030 PF00486 Transcriptional regulatory protein, C terminal NX08_017040 PF08443 RimK-like ATP-grasp domain NX08_017040 PF18030 RimK PreATP-grasp domain NX08_017045 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NX08_017045 PF00128 Alpha amylase, catalytic domain NX08_017200 PF00092 von Willebrand factor type A domain NX08_017220 PF03527 RHS protein NX08_017220 PF05593 RHS Repeat NX08_017255 PF00657 GDSL-like Lipase/Acylhydrolase NX08_017255 PF03797 Autotransporter beta-domain NX08_017265 PF05690 Thiazole biosynthesis protein ThiG NX08_017270 PF02390 Putative methyltransferase NX08_017275 PF03600 Citrate transporter NX08_017275 PF02080 TrkA-C domain NX08_017290 PF01557 Fumarylacetoacetate (FAA) hydrolase family NX08_017295 PF01741 Large-conductance mechanosensitive channel, MscL NX08_017305 PF00356 Bacterial regulatory proteins, lacI family NX08_017340 PF14508 Glycosyl-hydrolase 97 N-terminal NX08_017340 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation NX08_017340 PF10566 Glycoside hydrolase 97 NX08_017350 PF00135 Carboxylesterase family NX08_017355 PF08032 RNA 2'-O ribose methyltransferase substrate binding NX08_017355 PF00588 SpoU rRNA Methylase family NX08_017370 PF00873 AcrB/AcrD/AcrF family NX08_017375 PF00529 HlyD membrane-fusion protein of T1SS NX08_017375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NX08_017380 PF00009 Elongation factor Tu GTP binding domain NX08_017385 PF01507 Phosphoadenosine phosphosulfate reductase family NX08_017390 PF00175 Oxidoreductase NAD-binding domain NX08_017390 PF00667 FAD binding domain NX08_017390 PF00258 Flavodoxin NX08_017395 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NX08_017395 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NX08_017400 PF01507 Phosphoadenosine phosphosulfate reductase family NX08_017420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_017420 PF00072 Response regulator receiver domain NX08_017420 PF00512 His Kinase A (phospho-acceptor) domain NX08_017420 PF01627 Hpt domain NX08_017420 PF00672 HAMP domain NX08_017435 PF03466 LysR substrate binding domain NX08_017435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_017440 PF14824 Sirohaem biosynthesis protein central NX08_017440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NX08_017440 PF10414 Sirohaem synthase dimerisation region NX08_017445 PF00291 Pyridoxal-phosphate dependent enzyme NX08_017455 PF01661 Macro domain NX08_017460 PF00274 Fructose-bisphosphate aldolase class-I NX08_017470 PF02887 Pyruvate kinase, alpha/beta domain NX08_017470 PF00224 Pyruvate kinase, barrel domain NX08_017480 PF00162 Phosphoglycerate kinase NX08_017505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NX08_017505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NX08_017525 PF03922 OmpW family NX08_017535 PF00753 Metallo-beta-lactamase superfamily NX08_017535 PF04273 Putative phosphatase (DUF442) NX08_017545 PF00528 Binding-protein-dependent transport system inner membrane component NX08_017550 PF03459 TOBE domain NX08_017550 PF00005 ABC transporter NX08_017570 PF01476 LysM domain NX08_017570 PF03734 L,D-transpeptidase catalytic domain NX08_017575 PF01551 Peptidase family M23 NX08_017575 PF04225 Opacity-associated protein A LysM-like domain NX08_017585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_017585 PF03466 LysR substrate binding domain NX08_017590 PF00593 TonB dependent receptor NX08_017590 PF07715 TonB-dependent Receptor Plug Domain NX08_017605 PF02779 Transketolase, pyrimidine binding domain NX08_017605 PF02780 Transketolase, C-terminal domain NX08_017605 PF00456 Transketolase, thiamine diphosphate binding domain NX08_017610 PF00375 Sodium:dicarboxylate symporter family NX08_017625 PF00092 von Willebrand factor type A domain NX08_017625 PF07584 Aerotolerance regulator N-terminal NX08_017645 PF17863 AAA lid domain NX08_017645 PF07726 ATPase family associated with various cellular activities (AAA) NX08_017650 PF07660 Secretin and TonB N terminus short domain NX08_017650 PF11741 AMIN domain NX08_017650 PF03958 Bacterial type II/III secretion system short domain NX08_017650 PF00263 Bacterial type II and III secretion system protein NX08_017675 PF17092 Penicillin-binding protein OB-like domain NX08_017675 PF00912 Transglycosylase NX08_017675 PF00905 Penicillin binding protein transpeptidase domain NX08_017685 PF00285 Citrate synthase, C-terminal domain NX08_017690 PF01197 Ribosomal protein L31 NX08_017695 PF01156 Inosine-uridine preferring nucleoside hydrolase NX08_017700 PF17191 RecG wedge domain NX08_017700 PF00271 Helicase conserved C-terminal domain NX08_017700 PF00270 DEAD/DEAH box helicase NX08_017705 PF01042 Endoribonuclease L-PSP NX08_017710 PF13291 ACT domain NX08_017710 PF04607 Region found in RelA / SpoT proteins NX08_017710 PF02824 TGS domain NX08_017715 PF01192 RNA polymerase Rpb6 NX08_017725 PF00625 Guanylate kinase NX08_017730 PF08340 Domain of unknown function (DUF1732) NX08_017730 PF03755 YicC-like family, N-terminal region NX08_017735 PF03725 3' exoribonuclease family, domain 2 NX08_017735 PF01138 3' exoribonuclease family, domain 1 NX08_017745 PF01725 Ham1 family NX08_017750 PF04055 Radical SAM superfamily NX08_017750 PF06969 HemN C-terminal domain NX08_017765 PF00557 Metallopeptidase family M24 NX08_017775 PF05195 Aminopeptidase P, N-terminal domain NX08_017775 PF00557 Metallopeptidase family M24 NX08_017780 PF03695 Uncharacterised protein family (UPF0149) NX08_017790 PF05164 Cell division protein ZapA NX08_017800 PF01812 5-formyltetrahydrofolate cyclo-ligase family NX08_017810 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NX08_017820 PF13369 Transglutaminase-like superfamily NX08_017825 PF00301 Rubredoxin NX08_017830 PF02581 Thiamine monophosphate synthase NX08_017850 PF00202 Aminotransferase class-III NX08_017855 PF00196 Bacterial regulatory proteins, luxR family NX08_017855 PF17874 MalT-like TPR region NX08_017860 PF00127 Copper binding proteins, plastocyanin/azurin family NX08_017865 PF00155 Aminotransferase class I and II NX08_017875 PF00034 Cytochrome c NX08_017875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NX08_017880 PF01593 Flavin containing amine oxidoreductase NX08_017895 PF00202 Aminotransferase class-III NX08_017900 PF00520 Ion transport protein NX08_017900 PF00027 Cyclic nucleotide-binding domain NX08_017920 PF01569 PAP2 superfamily NX08_017925 PF01062 Bestrophin, RFP-TM, chloride channel NX08_017935 PF01225 Mur ligase family, catalytic domain NX08_017935 PF02875 Mur ligase family, glutamate ligase domain NX08_017935 PF08245 Mur ligase middle domain NX08_017945 PF00365 Phosphofructokinase NX08_017955 PF03030 Inorganic H+ pyrophosphatase NX08_017965 PF00719 Inorganic pyrophosphatase NX08_017975 PF07715 TonB-dependent Receptor Plug Domain NX08_017975 PF00593 TonB dependent receptor NX08_017980 PF12833 Helix-turn-helix domain NX08_017985 PF00486 Transcriptional regulatory protein, C terminal NX08_017985 PF18500 CadC C-terminal domain 1 NX08_017990 PF13667 ThiC-associated domain NX08_017990 PF01964 Radical SAM ThiC family NX08_018005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_018005 PF00672 HAMP domain NX08_018015 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NX08_018015 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NX08_018020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NX08_018020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NX08_018020 PF00205 Thiamine pyrophosphate enzyme, central domain NX08_018030 PF00291 Pyridoxal-phosphate dependent enzyme NX08_018035 PF00682 HMGL-like NX08_018035 PF08502 LeuA allosteric (dimerisation) domain NX08_018040 PF00180 Isocitrate/isopropylmalate dehydrogenase NX08_018045 PF08241 Methyltransferase domain NX08_018050 PF00694 Aconitase C-terminal domain NX08_018060 PF00330 Aconitase family (aconitate hydratase) NX08_018065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_018075 PF00990 Diguanylate cyclase, GGDEF domain NX08_018075 PF17151 Periplasmic sensor domain NX08_018090 PF02321 Outer membrane efflux protein NX08_018095 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NX08_018100 PF03279 Bacterial lipid A biosynthesis acyltransferase NX08_018130 PF03949 Malic enzyme, NAD binding domain NX08_018130 PF00390 Malic enzyme, N-terminal domain NX08_018130 PF01515 Phosphate acetyl/butaryl transferase NX08_018135 PF00375 Sodium:dicarboxylate symporter family NX08_018150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_018150 PF00512 His Kinase A (phospho-acceptor) domain NX08_018155 PF07690 Major Facilitator Superfamily NX08_018165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_018165 PF03466 LysR substrate binding domain NX08_018170 PF00248 Aldo/keto reductase family NX08_018185 PF00072 Response regulator receiver domain NX08_018185 PF00196 Bacterial regulatory proteins, luxR family NX08_018195 PF08521 Two-component sensor kinase N-terminal NX08_018195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_018195 PF00512 His Kinase A (phospho-acceptor) domain NX08_018200 PF00072 Response regulator receiver domain NX08_018200 PF00486 Transcriptional regulatory protein, C terminal NX08_018220 PF03600 Citrate transporter NX08_018225 PF00106 short chain dehydrogenase NX08_018230 PF00356 Bacterial regulatory proteins, lacI family NX08_018245 PF00128 Alpha amylase, catalytic domain NX08_018260 PF03193 RsgA GTPase NX08_018265 PF00155 Aminotransferase class I and II NX08_018285 PF01522 Polysaccharide deacetylase NX08_018290 PF00462 Glutaredoxin NX08_018305 PF01979 Amidohydrolase family NX08_018310 PF01979 Amidohydrolase family NX08_018360 PF00756 Putative esterase NX08_018365 PF04828 Glutathione-dependent formaldehyde-activating enzyme NX08_018370 PF08240 Alcohol dehydrogenase GroES-like domain NX08_018370 PF00107 Zinc-binding dehydrogenase NX08_018375 PF02583 Metal-sensitive transcriptional repressor NX08_018385 PF00486 Transcriptional regulatory protein, C terminal NX08_018385 PF00072 Response regulator receiver domain NX08_018390 PF00512 His Kinase A (phospho-acceptor) domain NX08_018390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_018390 PF00672 HAMP domain NX08_018410 PF04107 Glutamate-cysteine ligase family 2(GCS2) NX08_018420 PF01926 50S ribosome-binding GTPase NX08_018425 PF00034 Cytochrome c NX08_018435 PF01323 DSBA-like thioredoxin domain NX08_018465 PF05199 GMC oxidoreductase NX08_018465 PF00732 GMC oxidoreductase NX08_018470 PF00583 Acetyltransferase (GNAT) family NX08_018480 PF01066 CDP-alcohol phosphatidyltransferase NX08_018490 PF03129 Anticodon binding domain NX08_018490 PF04073 Aminoacyl-tRNA editing domain NX08_018490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NX08_018495 PF00816 H-NS histone family NX08_018505 PF02405 Permease MlaE NX08_018510 PF00005 ABC transporter NX08_018515 PF02470 MlaD protein NX08_018515 PF03886 ABC-type transport auxiliary lipoprotein component NX08_018540 PF14307 Glycosyltransferase WbsX NX08_018540 PF05045 Rhamnan synthesis protein F NX08_018545 PF01144 Coenzyme A transferase NX08_018550 PF01144 Coenzyme A transferase NX08_018555 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NX08_018555 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NX08_018555 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NX08_018555 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NX08_018560 PF00483 Nucleotidyl transferase NX08_018560 PF01050 Mannose-6-phosphate isomerase NX08_018565 PF04321 RmlD substrate binding domain NX08_018570 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NX08_018575 PF00483 Nucleotidyl transferase NX08_018580 PF16363 GDP-mannose 4,6 dehydratase NX08_018585 PF01012 Electron transfer flavoprotein domain NX08_018590 PF01012 Electron transfer flavoprotein domain NX08_018590 PF00766 Electron transfer flavoprotein FAD-binding domain NX08_018600 PF01040 UbiA prenyltransferase family NX08_018605 PF01565 FAD binding domain NX08_018605 PF04030 D-arabinono-1,4-lactone oxidase NX08_018610 PF00106 short chain dehydrogenase NX08_018615 PF01370 NAD dependent epimerase/dehydratase family NX08_018645 PF13439 Glycosyltransferase Family 4 NX08_018645 PF00534 Glycosyl transferases group 1 NX08_018650 PF16363 GDP-mannose 4,6 dehydratase NX08_018655 PF16363 GDP-mannose 4,6 dehydratase NX08_018665 PF00005 ABC transporter NX08_018680 PF01053 Cys/Met metabolism PLP-dependent enzyme NX08_018685 PF00291 Pyridoxal-phosphate dependent enzyme NX08_018685 PF00571 CBS domain NX08_018705 PF00437 Type II/IV secretion system protein NX08_018710 PF02798 Glutathione S-transferase, N-terminal domain NX08_018710 PF14497 Glutathione S-transferase, C-terminal domain NX08_018725 PF00271 Helicase conserved C-terminal domain NX08_018725 PF00270 DEAD/DEAH box helicase NX08_018735 PF01242 6-pyruvoyl tetrahydropterin synthase NX08_018750 PF13185 GAF domain NX08_018760 PF13419 Haloacid dehalogenase-like hydrolase NX08_018765 PF00817 impB/mucB/samB family NX08_018765 PF11799 impB/mucB/samB family C-terminal domain NX08_018770 PF07977 FabA-like domain NX08_018775 PF02801 Beta-ketoacyl synthase, C-terminal domain NX08_018775 PF00109 Beta-ketoacyl synthase, N-terminal domain NX08_018790 PF01432 Peptidase family M3 NX08_018805 PF07732 Multicopper oxidase NX08_018805 PF07731 Multicopper oxidase NX08_018805 PF00394 Multicopper oxidase NX08_018810 PF05275 Copper resistance protein B precursor (CopB) NX08_018815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NX08_018840 PF01380 SIS domain NX08_018845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NX08_018850 PF00005 ABC transporter NX08_018855 PF02687 FtsX-like permease family NX08_018855 PF12704 MacB-like periplasmic core domain NX08_018860 PF02687 FtsX-like permease family NX08_018860 PF12704 MacB-like periplasmic core domain NX08_018865 PF02954 Bacterial regulatory protein, Fis family NX08_018865 PF00158 Sigma-54 interaction domain NX08_018865 PF00072 Response regulator receiver domain NX08_018870 PF13426 PAS domain NX08_018870 PF00512 His Kinase A (phospho-acceptor) domain NX08_018870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_018870 PF08448 PAS fold NX08_018870 PF00072 Response regulator receiver domain NX08_018875 PF14602 Hexapeptide repeat of succinyl-transferase NX08_018875 PF12804 MobA-like NTP transferase domain NX08_018875 PF00132 Bacterial transferase hexapeptide (six repeats) NX08_018905 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NX08_018910 PF02874 ATP synthase alpha/beta family, beta-barrel domain NX08_018910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NX08_018915 PF00231 ATP synthase NX08_018920 PF02874 ATP synthase alpha/beta family, beta-barrel domain NX08_018920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NX08_018920 PF00306 ATP synthase alpha/beta chain, C terminal domain NX08_018925 PF00213 ATP synthase delta (OSCP) subunit NX08_018930 PF00430 ATP synthase B/B' CF(0) NX08_018935 PF00137 ATP synthase subunit C NX08_018940 PF00119 ATP synthase A chain NX08_018960 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_018960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NX08_018970 PF02817 e3 binding domain NX08_018970 PF00364 Biotin-requiring enzyme NX08_018970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NX08_019010 PF03180 NLPA lipoprotein NX08_019015 PF00528 Binding-protein-dependent transport system inner membrane component NX08_019020 PF00005 ABC transporter NX08_019020 PF09383 NIL domain NX08_019025 PF00892 EamA-like transporter family NX08_019030 PF04461 Protein of unknown function (DUF520) NX08_019070 PF01479 S4 domain NX08_019070 PF00849 RNA pseudouridylate synthase NX08_019075 PF08468 Methyltransferase small domain N-terminal NX08_019075 PF05175 Methyltransferase small domain NX08_019090 PF07995 Glucose / Sorbosone dehydrogenase NX08_019105 PF00989 PAS fold NX08_019105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_019105 PF00512 His Kinase A (phospho-acceptor) domain NX08_019125 PF01168 Alanine racemase, N-terminal domain NX08_019125 PF00842 Alanine racemase, C-terminal domain NX08_019130 PF01266 FAD dependent oxidoreductase NX08_019135 PF01037 Lrp/AsnC ligand binding domain NX08_019145 PF01641 SelR domain NX08_019155 PF01618 MotA/TolQ/ExbB proton channel family NX08_019160 PF13677 Membrane MotB of proton-channel complex MotA/MotB NX08_019160 PF00691 OmpA family NX08_019175 PF00072 Response regulator receiver domain NX08_019175 PF00486 Transcriptional regulatory protein, C terminal NX08_019180 PF00072 Response regulator receiver domain NX08_019180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_019180 PF13188 PAS domain NX08_019180 PF08448 PAS fold NX08_019180 PF00512 His Kinase A (phospho-acceptor) domain NX08_019190 PF00082 Subtilase family NX08_019190 PF04151 Bacterial pre-peptidase C-terminal domain NX08_019195 PF04151 Bacterial pre-peptidase C-terminal domain NX08_019195 PF09286 Pro-kumamolisin, activation domain NX08_019215 PF01061 ABC-2 type transporter NX08_019220 PF00005 ABC transporter NX08_019225 PF00999 Sodium/hydrogen exchanger family NX08_019235 PF02469 Fasciclin domain NX08_019240 PF03167 Uracil DNA glycosylase superfamily NX08_019265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_019265 PF03466 LysR substrate binding domain NX08_019270 PF03358 NADPH-dependent FMN reductase NX08_019275 PF00248 Aldo/keto reductase family NX08_019285 PF01431 Peptidase family M13 NX08_019285 PF05649 Peptidase family M13 NX08_019300 PF13520 Amino acid permease NX08_019310 PF04397 LytTr DNA-binding domain NX08_019310 PF00072 Response regulator receiver domain NX08_019315 PF02743 Cache domain NX08_019315 PF00672 HAMP domain NX08_019315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_019315 PF06580 Histidine kinase NX08_019340 PF05974 Domain of unknown function (DUF892) NX08_019345 PF05067 Manganese containing catalase NX08_019380 PF02954 Bacterial regulatory protein, Fis family NX08_019380 PF00158 Sigma-54 interaction domain NX08_019380 PF00072 Response regulator receiver domain NX08_019395 PF01654 Cytochrome bd terminal oxidase subunit I NX08_019400 PF02322 Cytochrome bd terminal oxidase subunit II NX08_019420 PF16363 GDP-mannose 4,6 dehydratase NX08_019430 PF03275 UDP-galactopyranose mutase NX08_019440 PF00664 ABC transporter transmembrane region NX08_019440 PF00005 ABC transporter NX08_019455 PF00107 Zinc-binding dehydrogenase NX08_019455 PF13823 Alcohol dehydrogenase GroES-associated NX08_019455 PF08240 Alcohol dehydrogenase GroES-like domain NX08_019495 PF07715 TonB-dependent Receptor Plug Domain NX08_019495 PF00593 TonB dependent receptor NX08_019510 PF00005 ABC transporter NX08_019540 PF00654 Voltage gated chloride channel NX08_019550 PF00557 Metallopeptidase family M24 NX08_019645 PF00589 Phage integrase family NX08_019645 PF13356 Arm DNA-binding domain NX08_019665 PF04539 Sigma-70 region 3 NX08_019665 PF04545 Sigma-70, region 4 NX08_019665 PF04542 Sigma-70 region 2 NX08_019665 PF04546 Sigma-70, non-essential region NX08_019665 PF03979 Sigma-70 factor, region 1.1 NX08_019665 PF00140 Sigma-70 factor, region 1.2 NX08_019670 PF02580 D-Tyr-tRNA(Tyr) deacylase NX08_019675 PF03279 Bacterial lipid A biosynthesis acyltransferase NX08_019685 PF00925 GTP cyclohydrolase II NX08_019705 PF00535 Glycosyl transferase family 2 NX08_019720 PF01029 NusB family NX08_019720 PF01189 16S rRNA methyltransferase RsmB/F NX08_019725 PF00551 Formyl transferase NX08_019725 PF02911 Formyl transferase, C-terminal domain NX08_019730 PF01327 Polypeptide deformylase NX08_019735 PF01476 LysM domain NX08_019740 PF17782 DprA winged helix domain NX08_019740 PF02481 DNA recombination-mediator protein A NX08_019745 PF04361 Protein of unknown function (DUF494) NX08_019750 PF00114 Pilin (bacterial filament) NX08_019750 PF07963 Prokaryotic N-terminal methylation motif NX08_019760 PF01751 Toprim domain NX08_019760 PF01131 DNA topoisomerase NX08_019760 PF13368 Topoisomerase C-terminal repeat NX08_019765 PF01300 Telomere recombination NX08_019790 PF01343 Peptidase family S49 NX08_019795 PF01554 MatE NX08_019815 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NX08_019815 PF17764 3′ DNA-binding domain (3′BD) NX08_019815 PF18074 Primosomal protein N C-terminal domain NX08_019815 PF00271 Helicase conserved C-terminal domain NX08_019815 PF00270 DEAD/DEAH box helicase NX08_019835 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_019840 PF03458 UPF0126 domain NX08_019845 PF04545 Sigma-70, region 4 NX08_019845 PF04542 Sigma-70 region 2 NX08_019850 PF03167 Uracil DNA glycosylase superfamily NX08_019855 PF00072 Response regulator receiver domain NX08_019860 PF18075 FtsX extracellular domain NX08_019865 PF00005 ABC transporter NX08_019870 PF12300 ATP-dependent RNA helicase RhlB NX08_019870 PF00271 Helicase conserved C-terminal domain NX08_019870 PF00270 DEAD/DEAH box helicase NX08_019875 PF00085 Thioredoxin NX08_019880 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NX08_019880 PF07497 Rho termination factor, RNA-binding domain NX08_019880 PF07498 Rho termination factor, N-terminal domain NX08_019890 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) NX08_019895 PF03466 LysR substrate binding domain NX08_019895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_019905 PF03971 Monomeric isocitrate dehydrogenase NX08_019920 PF09704 CRISPR-associated protein (Cas_Cas5) NX08_019940 PF01867 CRISPR associated protein Cas1 NX08_019945 PF09827 CRISPR associated protein Cas2 NX08_019955 PF01476 LysM domain NX08_019955 PF04972 BON domain NX08_019960 PF14489 QueF-like protein NX08_019960 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NX08_019970 PF13533 Biotin-lipoyl like NX08_019975 PF00873 AcrB/AcrD/AcrF family NX08_019980 PF00873 AcrB/AcrD/AcrF family NX08_020000 PF07063 Domain of unknown function (DUF1338) NX08_020040 PF01427 D-ala-D-ala dipeptidase NX08_020045 PF01510 N-acetylmuramoyl-L-alanine amidase NX08_020055 PF13378 Enolase C-terminal domain-like NX08_020055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NX08_020065 PF13520 Amino acid permease NX08_020080 PF05360 yiaA/B two helix domain NX08_020085 PF07995 Glucose / Sorbosone dehydrogenase NX08_020090 PF00933 Glycosyl hydrolase family 3 N terminal domain NX08_020090 PF14310 Fibronectin type III-like domain NX08_020090 PF01915 Glycosyl hydrolase family 3 C-terminal domain NX08_020095 PF02152 Dihydroneopterin aldolase NX08_020100 PF00814 Glycoprotease family NX08_020105 PF01165 Ribosomal protein S21 NX08_020110 PF09424 Yqey-like protein NX08_020115 PF03631 Virulence factor BrkB NX08_020120 PF08275 DNA primase catalytic core, N-terminal domain NX08_020120 PF01807 CHC2 zinc finger NX08_020120 PF08278 DNA primase DnaG DnaB-binding NX08_020120 PF10410 DnaB-helicase binding domain of primase NX08_020125 PF13593 SBF-like CPA transporter family (DUF4137) NX08_020135 PF01040 UbiA prenyltransferase family NX08_020160 PF00510 Cytochrome c oxidase subunit III NX08_020165 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 NX08_020175 PF00115 Cytochrome C and Quinol oxidase polypeptide I NX08_020180 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NX08_020180 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NX08_020190 PF00171 Aldehyde dehydrogenase family NX08_020190 PF01619 Proline dehydrogenase NX08_020190 PF14850 DNA-binding domain of Proline dehydrogenase NX08_020190 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NX08_020230 PF00579 tRNA synthetases class I (W and Y) NX08_020235 PF04225 Opacity-associated protein A LysM-like domain NX08_020235 PF01551 Peptidase family M23 NX08_020240 PF03702 Anhydro-N-acetylmuramic acid kinase NX08_020250 PF07690 Major Facilitator Superfamily NX08_020255 PF03372 Endonuclease/Exonuclease/phosphatase family NX08_020260 PF00156 Phosphoribosyl transferase domain NX08_020270 PF13614 AAA domain NX08_020275 PF02195 ParB-like nuclease domain NX08_020275 PF17762 HTH domain found in ParB protein NX08_020290 PF01370 NAD dependent epimerase/dehydratase family NX08_020295 PF00535 Glycosyl transferase family 2 NX08_020310 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NX08_020310 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NX08_020310 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NX08_020310 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NX08_020315 PF00692 dUTPase NX08_020320 PF04127 DNA / pantothenate metabolism flavoprotein NX08_020320 PF02441 Flavoprotein NX08_020325 PF04002 RadC-like JAB domain NX08_020330 PF05746 DALR anticodon binding domain NX08_020330 PF00750 tRNA synthetases class I (R) NX08_020330 PF03485 Arginyl tRNA synthetase N terminal domain NX08_020345 PF00106 short chain dehydrogenase NX08_020355 PF03033 Glycosyltransferase family 28 N-terminal domain NX08_020360 PF00501 AMP-binding enzyme NX08_020360 PF00668 Condensation domain NX08_020360 PF13193 AMP-binding enzyme C-terminal domain NX08_020360 PF00975 Thioesterase domain NX08_020360 PF00550 Phosphopantetheine attachment site NX08_020365 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NX08_020365 PF17944 Arginine decarboxylase C-terminal helical extension NX08_020365 PF17810 Arginine decarboxylase helical bundle domain NX08_020370 PF17284 Spermidine synthase tetramerisation domain NX08_020400 PF02838 Glycosyl hydrolase family 20, domain 2 NX08_020400 PF00041 Fibronectin type III domain NX08_020400 PF00754 F5/8 type C domain NX08_020400 PF00963 Cohesin domain NX08_020400 PF07555 beta-N-acetylglucosaminidase NX08_020405 PF00543 Nitrogen regulatory protein P-II NX08_020410 PF04380 Membrane fusogenic activity NX08_020440 PF03412 Peptidase C39 family NX08_020440 PF00005 ABC transporter NX08_020440 PF00664 ABC transporter transmembrane region NX08_020505 PF01381 Helix-turn-helix NX08_020560 PF00665 Integrase core domain NX08_020585 PF12792 CSS motif domain associated with EAL NX08_020585 PF00563 EAL domain NX08_020590 PF00487 Fatty acid desaturase NX08_020595 PF00970 Oxidoreductase FAD-binding domain NX08_020595 PF00111 2Fe-2S iron-sulfur cluster binding domain NX08_020595 PF00175 Oxidoreductase NAD-binding domain NX08_020600 PF00440 Bacterial regulatory proteins, tetR family NX08_020610 PF01139 tRNA-splicing ligase RtcB NX08_020650 PF08338 Domain of unknown function (DUF1731) NX08_020650 PF01370 NAD dependent epimerase/dehydratase family NX08_020660 PF00595 PDZ domain NX08_020680 PF01594 AI-2E family transporter NX08_020685 PF13419 Haloacid dehalogenase-like hydrolase NX08_020690 PF02789 Cytosol aminopeptidase family, N-terminal domain NX08_020690 PF00883 Cytosol aminopeptidase family, catalytic domain NX08_020700 PF08281 Sigma-70, region 4 NX08_020700 PF04542 Sigma-70 region 2 NX08_020705 PF00199 Catalase NX08_020720 PF00072 Response regulator receiver domain NX08_020720 PF00196 Bacterial regulatory proteins, luxR family NX08_020725 PF07730 Histidine kinase NX08_020730 PF13533 Biotin-lipoyl like NX08_020735 PF00005 ABC transporter NX08_020755 PF00892 EamA-like transporter family NX08_020785 PF00753 Metallo-beta-lactamase superfamily NX08_020790 PF00579 tRNA synthetases class I (W and Y) NX08_020795 PF05532 CsbD-like NX08_020810 PF00491 Arginase family NX08_020840 PF02223 Thymidylate kinase NX08_020855 PF03309 Type III pantothenate kinase NX08_020860 PF02237 Biotin protein ligase C terminal domain NX08_020860 PF03099 Biotin/lipoate A/B protein ligase family NX08_020860 PF08279 HTH domain NX08_020890 PF00672 HAMP domain NX08_020890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_020890 PF00512 His Kinase A (phospho-acceptor) domain NX08_020895 PF00486 Transcriptional regulatory protein, C terminal NX08_020895 PF00072 Response regulator receiver domain NX08_020905 PF01207 Dihydrouridine synthase (Dus) NX08_020925 PF06628 Catalase-related immune-responsive NX08_020925 PF00199 Catalase NX08_020940 PF06733 DEAD_2 NX08_020940 PF13307 Helicase C-terminal domain NX08_020955 PF08501 Shikimate dehydrogenase substrate binding domain NX08_020955 PF01488 Shikimate / quinate 5-dehydrogenase NX08_020955 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NX08_020975 PF00667 FAD binding domain NX08_020975 PF00258 Flavodoxin NX08_020975 PF00175 Oxidoreductase NAD-binding domain NX08_020985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_020985 PF03466 LysR substrate binding domain NX08_021000 PF00490 Delta-aminolevulinic acid dehydratase NX08_021040 PF02798 Glutathione S-transferase, N-terminal domain NX08_021040 PF00043 Glutathione S-transferase, C-terminal domain NX08_021060 PF04820 Tryptophan halogenase NX08_021080 PF00005 ABC transporter NX08_021095 PF01381 Helix-turn-helix NX08_021105 PF02583 Metal-sensitive transcriptional repressor NX08_021110 PF01545 Cation efflux family NX08_021115 PF00970 Oxidoreductase FAD-binding domain NX08_021115 PF00111 2Fe-2S iron-sulfur cluster binding domain NX08_021115 PF00175 Oxidoreductase NAD-binding domain NX08_021120 PF00005 ABC transporter NX08_021125 PF01061 ABC-2 type transporter NX08_021135 PF08546 Ketopantoate reductase PanE/ApbA C terminal NX08_021135 PF02558 Ketopantoate reductase PanE/ApbA NX08_021160 PF03061 Thioesterase superfamily NX08_021180 PF00268 Ribonucleotide reductase, small chain NX08_021190 PF03477 ATP cone domain NX08_021190 PF02867 Ribonucleotide reductase, barrel domain NX08_021190 PF00317 Ribonucleotide reductase, all-alpha domain NX08_021205 PF13607 Succinyl-CoA ligase like flavodoxin domain NX08_021205 PF13380 CoA binding domain NX08_021205 PF00583 Acetyltransferase (GNAT) family NX08_021220 PF00571 CBS domain NX08_021220 PF03448 MgtE intracellular N domain NX08_021220 PF01769 Divalent cation transporter NX08_021230 PF00999 Sodium/hydrogen exchanger family NX08_021230 PF02254 TrkA-N domain NX08_021235 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NX08_021235 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NX08_021240 PF00723 Glycosyl hydrolases family 15 NX08_021255 PF05166 YcgL domain NX08_021260 PF02801 Beta-ketoacyl synthase, C-terminal domain NX08_021260 PF00109 Beta-ketoacyl synthase, N-terminal domain NX08_021270 PF00535 Glycosyl transferase family 2 NX08_021280 PF07519 Tannase and feruloyl esterase NX08_021310 PF07977 FabA-like domain NX08_021315 PF01553 Acyltransferase NX08_021325 PF00550 Phosphopantetheine attachment site NX08_021330 PF04820 Tryptophan halogenase NX08_021400 PF00005 ABC transporter NX08_021415 PF05114 Protein of unknown function (DUF692) NX08_021445 PF01218 Coproporphyrinogen III oxidase NX08_021485 PF00561 alpha/beta hydrolase fold NX08_021490 PF00512 His Kinase A (phospho-acceptor) domain NX08_021490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_021495 PF00486 Transcriptional regulatory protein, C terminal NX08_021495 PF00072 Response regulator receiver domain NX08_021500 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NX08_021500 PF01612 3'-5' exonuclease NX08_021500 PF00476 DNA polymerase family A NX08_021500 PF01367 5'-3' exonuclease, C-terminal SAM fold NX08_021545 PF12464 Maltose acetyltransferase NX08_021545 PF14602 Hexapeptide repeat of succinyl-transferase NX08_021555 PF13361 UvrD-like helicase C-terminal domain NX08_021555 PF00580 UvrD/REP helicase N-terminal domain NX08_021575 PF13396 Phospholipase_D-nuclease N-terminal NX08_021575 PF13091 PLD-like domain NX08_021585 PF04909 Amidohydrolase NX08_021595 PF00471 Ribosomal protein L33 NX08_021600 PF00830 Ribosomal L28 family NX08_021605 PF00873 AcrB/AcrD/AcrF family NX08_021610 PF13533 Biotin-lipoyl like NX08_021635 PF02527 rRNA small subunit methyltransferase G NX08_021650 PF01648 4'-phosphopantetheinyl transferase superfamily NX08_021655 PF04226 Transglycosylase associated protein NX08_021665 PF03372 Endonuclease/Exonuclease/phosphatase family NX08_021670 PF00480 ROK family NX08_021680 PF09312 SurA N-terminal domain NX08_021680 PF00639 PPIC-type PPIASE domain NX08_021690 PF00474 Sodium:solute symporter family NX08_021695 PF04341 Protein of unknown function, DUF485 NX08_021705 PF16177 Acetyl-coenzyme A synthetase N-terminus NX08_021705 PF13193 AMP-binding enzyme C-terminal domain NX08_021705 PF00501 AMP-binding enzyme NX08_021710 PF00196 Bacterial regulatory proteins, luxR family NX08_021710 PF00072 Response regulator receiver domain NX08_021760 PF01557 Fumarylacetoacetate (FAA) hydrolase family NX08_021765 PF13378 Enolase C-terminal domain-like NX08_021765 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NX08_021770 PF05336 L-rhamnose mutarotase NX08_021775 PF07690 Major Facilitator Superfamily NX08_021780 PF01614 Bacterial transcriptional regulator NX08_021780 PF09339 IclR helix-turn-helix domain NX08_021790 PF02659 Putative manganese efflux pump NX08_021795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_021795 PF00512 His Kinase A (phospho-acceptor) domain NX08_021805 PF06165 Glycosyltransferase family 36 NX08_021805 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain NX08_021855 PF04357 TamB, inner membrane protein subunit of TAM complex NX08_021860 PF01103 Surface antigen NX08_021860 PF17243 POTRA domain TamA domain 1 NX08_021875 PF13340 Putative transposase of IS4/5 family (DUF4096) NX08_021885 PF00593 TonB dependent receptor NX08_021885 PF07715 TonB-dependent Receptor Plug Domain NX08_021890 PF13181 Tetratricopeptide repeat NX08_021895 PF05746 DALR anticodon binding domain NX08_021895 PF02092 Glycyl-tRNA synthetase beta subunit NX08_021900 PF02091 Glycyl-tRNA synthetase alpha subunit NX08_021905 PF00437 Type II/IV secretion system protein NX08_021905 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NX08_021930 PF00117 Glutamine amidotransferase class-I NX08_021930 PF00958 GMP synthase C terminal domain NX08_021940 PF00902 Sec-independent protein translocase protein (TatC) NX08_021945 PF02416 mttA/Hcf106 family NX08_021950 PF02416 mttA/Hcf106 family NX08_021960 PF00762 Ferrochelatase NX08_021965 PF12697 Alpha/beta hydrolase family NX08_021980 PF04381 Putative exonuclease, RdgC NX08_021985 PF01171 PP-loop family NX08_022000 PF00356 Bacterial regulatory proteins, lacI family NX08_022005 PF03648 Glycosyl hydrolase family 67 N-terminus NX08_022005 PF07488 Glycosyl hydrolase family 67 middle domain NX08_022005 PF07477 Glycosyl hydrolase family 67 C-terminus NX08_022015 PF13378 Enolase C-terminal domain-like NX08_022015 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NX08_022020 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain NX08_022020 PF04616 Glycosyl hydrolases family 43 NX08_022025 PF14310 Fibronectin type III-like domain NX08_022025 PF00933 Glycosyl hydrolase family 3 N terminal domain NX08_022025 PF07691 PA14 domain NX08_022025 PF01915 Glycosyl hydrolase family 3 C-terminal domain NX08_022030 PF08125 Mannitol dehydrogenase C-terminal domain NX08_022030 PF01232 Mannitol dehydrogenase Rossmann domain NX08_022065 PF02614 Glucuronate isomerase NX08_022070 PF00553 Cellulose binding domain NX08_022070 PF00331 Glycosyl hydrolase family 10 NX08_022070 PF03422 Carbohydrate binding module (family 6) NX08_022100 PF04616 Glycosyl hydrolases family 43 NX08_022135 PF00698 Acyl transferase domain NX08_022135 PF08240 Alcohol dehydrogenase GroES-like domain NX08_022135 PF00107 Zinc-binding dehydrogenase NX08_022135 PF16197 Ketoacyl-synthetase C-terminal extension NX08_022135 PF00109 Beta-ketoacyl synthase, N-terminal domain NX08_022135 PF02801 Beta-ketoacyl synthase, C-terminal domain NX08_022135 PF08659 KR domain NX08_022135 PF14765 Polyketide synthase dehydratase NX08_022135 PF00550 Phosphopantetheine attachment site NX08_022140 PF01553 Acyltransferase NX08_022150 PF00356 Bacterial regulatory proteins, lacI family NX08_022165 PF04820 Tryptophan halogenase NX08_022170 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NX08_022175 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) NX08_022180 PF04337 Protein of unknown function, DUF480 NX08_022195 PF00580 UvrD/REP helicase N-terminal domain NX08_022195 PF13361 UvrD-like helicase C-terminal domain NX08_022200 PF00265 Thymidine kinase NX08_022210 PF04349 Periplasmic glucan biosynthesis protein, MdoG NX08_022220 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NX08_022220 PF06827 Zinc finger found in FPG and IleRS NX08_022220 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NX08_022260 PF00360 Phytochrome region NX08_022260 PF13426 PAS domain NX08_022260 PF08446 PAS fold NX08_022260 PF01590 GAF domain NX08_022265 PF01126 Heme oxygenase NX08_022270 PF07690 Major Facilitator Superfamily NX08_022275 PF01263 Aldose 1-epimerase NX08_022285 PF02810 SEC-C motif NX08_022290 PF01925 Sulfite exporter TauE/SafE NX08_022320 PF02463 RecF/RecN/SMC N terminal domain NX08_022325 PF01227 GTP cyclohydrolase I NX08_022340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NX08_022340 PF00529 HlyD membrane-fusion protein of T1SS NX08_022345 PF02321 Outer membrane efflux protein NX08_022350 PF04632 Fusaric acid resistance protein family NX08_022355 PF00083 Sugar (and other) transporter NX08_022365 PF13396 Phospholipase_D-nuclease N-terminal NX08_022365 PF13091 PLD-like domain NX08_022410 PF00849 RNA pseudouridylate synthase NX08_022430 PF02463 RecF/RecN/SMC N terminal domain NX08_022475 PF01381 Helix-turn-helix NX08_022485 PF13538 UvrD-like helicase C-terminal domain NX08_022490 PF13361 UvrD-like helicase C-terminal domain NX08_022490 PF00580 UvrD/REP helicase N-terminal domain NX08_022490 PF12705 PD-(D/E)XK nuclease superfamily NX08_022495 PF17946 RecC C-terminal domain NX08_022530 PF00005 ABC transporter NX08_022535 PF02405 Permease MlaE NX08_022540 PF02470 MlaD protein NX08_022545 PF05494 MlaC protein NX08_022555 PF04333 MlaA lipoprotein NX08_022570 PF00255 Glutathione peroxidase NX08_022580 PF02646 RmuC family NX08_022615 PF13520 Amino acid permease NX08_022635 PF10947 Protein of unknown function (DUF2628) NX08_022645 PF05651 Putative sugar diacid recognition NX08_022645 PF17853 GGDEF-like domain NX08_022645 PF13556 PucR C-terminal helix-turn-helix domain NX08_022650 PF02595 Glycerate kinase family NX08_022655 PF07690 Major Facilitator Superfamily NX08_022675 PF10672 S-adenosylmethionine-dependent methyltransferase NX08_022675 PF17785 PUA-like domain NX08_022685 PF03741 Integral membrane protein TerC family NX08_022690 PF01694 Rhomboid family NX08_022695 PF03009 Glycerophosphoryl diester phosphodiesterase family NX08_022705 PF01569 PAP2 superfamily NX08_022710 PF01926 50S ribosome-binding GTPase NX08_022710 PF12631 MnmE helical domain NX08_022710 PF10396 GTP-binding protein TrmE N-terminus NX08_022720 PF14849 YidC periplasmic domain NX08_022720 PF02096 60Kd inner membrane protein NX08_022725 PF00825 Ribonuclease P NX08_022730 PF00468 Ribosomal protein L34