BJD12_00010	PF02261	Aspartate decarboxylase
BJD12_00015	PF00342	Phosphoglucose isomerase
BJD12_00020	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
BJD12_00025	PF13671	AAA domain
BJD12_00030	PF05787	Bacterial protein of unknown function (DUF839)
BJD12_00035	PF00933	Glycosyl hydrolase family 3 N terminal domain
BJD12_00035	PF01915	Glycosyl hydrolase family 3 C-terminal domain
BJD12_00045	PF00474	Sodium:solute symporter family
BJD12_00050	PF00563	EAL domain
BJD12_00050	PF00990	GGDEF domain
BJD12_00050	PF01590	GAF domain
BJD12_00055	PF00150	Cellulase (glycosyl hydrolase family 5)
BJD12_00060	PF00072	Response regulator receiver domain
BJD12_00060	PF02954	Bacterial regulatory protein, Fis family
BJD12_00065	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_00070	PF04551	GcpE protein
BJD12_00075	PF01569	PAP2 superfamily
BJD12_00080	PF07690	Major Facilitator Superfamily
BJD12_00085	PF01177	Asp/Glu/Hydantoin racemase
BJD12_00090	PF00892	EamA-like transporter family
BJD12_00095	PF01565	FAD binding domain
BJD12_00095	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
BJD12_00100	PF01180	Dihydroorotate dehydrogenase
BJD12_00105	PF08241	Methyltransferase domain
BJD12_00110	PF13828	BJD12_00110
BJD12_00115	PF00171	Aldehyde dehydrogenase family
BJD12_00130	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
BJD12_00135	PF13289	BJD12_00135
BJD12_00145	PF01527	Transposase
BJD12_00150	PF13276	BJD12_00150
BJD12_00150	PF13683	BJD12_00150
BJD12_00170	PF00816	H-NS histone family
BJD12_00175	PF01223	DNA/RNA non-specific endonuclease
BJD12_00180	PF01223	DNA/RNA non-specific endonuclease
BJD12_00205	PF04002	RadC-like JAB domain
BJD12_00210	PF07791	BJD12_00210
BJD12_00235	PF12796	Ankyrin repeats (3 copies)
BJD12_00245	PF00270	DEAD/DEAH box helicase
BJD12_00245	PF00271	Helicase conserved C-terminal domain
BJD12_00250	PF10923	BJD12_00250
BJD12_00255	PF05099	Tellurite resistance protein TerB
BJD12_00255	PF13208	BJD12_00255
BJD12_00255	PF15615	BJD12_00255
BJD12_00275	PF01527	Transposase
BJD12_00280	PF00665	Integrase core domain
BJD12_00280	PF13276	BJD12_00280
BJD12_00290	PF00589	Phage integrase family
BJD12_00300	PF13271	BJD12_00300
BJD12_00310	PF03389	MobA/MobL family
BJD12_00330	PF13560	Helix-turn-helix domain
BJD12_00335	PF13437	HlyD family secretion protein
BJD12_00340	PF00005	ABC transporter
BJD12_00340	PF00664	ABC transporter transmembrane region
BJD12_00340	PF03412	Peptidase C39 family
BJD12_00365	PF02794	BJD12_00365
BJD12_00370	PF02696	BJD12_00370
BJD12_00375	PF03389	MobA/MobL family
BJD12_00375	PF06114	Domain of unknown function (DUF955)
BJD12_00395	PF00589	Phage integrase family
BJD12_00435	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_00435	PF12729	BJD12_00435
BJD12_00445	PF13994	BJD12_00445
BJD12_00450	PF13641	Glycosyltransferase like family 2
BJD12_00455	PF01522	Polysaccharide deacetylase
BJD12_00455	PF14883	Hypothetical glycosyl hydrolase family 13
BJD12_00465	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
BJD12_00465	PF08479	POTRA domain, ShlB-type
BJD12_00465	PF17287	BJD12_00465
BJD12_00470	PF05594	BJD12_00470
BJD12_00470	PF05860	haemagglutination activity domain
BJD12_00470	PF13332	BJD12_00470
BJD12_00480	PF08845	BJD12_00480
BJD12_00505	PF13276	BJD12_00505
BJD12_00505	PF13683	BJD12_00505
BJD12_00510	PF01527	Transposase
BJD12_00515	PF03073	TspO/MBR family
BJD12_00525	PF00696	Amino acid kinase family
BJD12_00525	PF00742	Homoserine dehydrogenase
BJD12_00525	PF03447	Homoserine dehydrogenase, NAD binding domain
BJD12_00525	PF13840	ACT domain
BJD12_00530	PF00288	GHMP kinases N terminal domain
BJD12_00530	PF08544	GHMP kinases C terminal
BJD12_00535	PF07110	EthD domain
BJD12_00540	PF00291	Pyridoxal-phosphate dependent enzyme
BJD12_00540	PF14821	Threonine synthase N terminus
BJD12_00545	PF13645	BJD12_00545
BJD12_00550	PF00027	Cyclic nucleotide-binding domain
BJD12_00550	PF13545	Crp-like helix-turn-helix domain
BJD12_00555	PF03129	Anticodon binding domain
BJD12_00555	PF13393	Histidyl-tRNA synthetase
BJD12_00560	PF01371	Trp repressor protein
BJD12_00565	PF01634	ATP phosphoribosyltransferase
BJD12_00565	PF08029	HisG, C-terminal domain
BJD12_00570	PF00815	Histidinol dehydrogenase
BJD12_00575	PF00155	Aminotransferase class I and II
BJD12_00580	PF00475	Imidazoleglycerol-phosphate dehydratase
BJD12_00580	PF13242	HAD-hyrolase-like
BJD12_00585	PF00117	Glutamine amidotransferase class-I
BJD12_00590	PF00977	Histidine biosynthesis protein
BJD12_00595	PF00977	Histidine biosynthesis protein
BJD12_00600	PF01502	Phosphoribosyl-AMP cyclohydrolase
BJD12_00600	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
BJD12_00605	PF00149	Calcineurin-like phosphoesterase
BJD12_00605	PF16370	BJD12_00605
BJD12_00615	PF01650	Peptidase C13 family
BJD12_00625	PF03079	ARD/ARD' family
BJD12_00630	PF00596	Class II Aldolase and Adducin N-terminal domain
BJD12_00640	PF13520	Amino acid permease
BJD12_00645	PF13520	Amino acid permease
BJD12_00650	PF00293	NUDIX domain
BJD12_00655	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BJD12_00655	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BJD12_00660	PF01565	FAD binding domain
BJD12_00660	PF02913	FAD linked oxidases, C-terminal domain
BJD12_00665	PF09498	BJD12_00665
BJD12_00670	PF13387	BJD12_00670
BJD12_00680	PF01132	Elongation factor P (EF-P) OB domain
BJD12_00680	PF08207	Elongation factor P (EF-P) KOW-like domain
BJD12_00680	PF09285	Elongation factor P, C-terminal
BJD12_00685	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_00690	PF00682	HMGL-like
BJD12_00695	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BJD12_00700	PF00378	Enoyl-CoA hydratase/isomerase family
BJD12_00705	PF04023	FeoA domain
BJD12_00710	PF02421	Ferrous iron transport protein B
BJD12_00710	PF07664	BJD12_00710
BJD12_00710	PF07670	Nucleoside recognition
BJD12_00725	PF00155	Aminotransferase class I and II
BJD12_00730	PF03473	MOSC domain
BJD12_00730	PF03475	3-alpha domain
BJD12_00735	PF01113	Dihydrodipicolinate reductase, N-terminus
BJD12_00735	PF05173	Dihydrodipicolinate reductase, C-terminus
BJD12_00740	PF00117	Glutamine amidotransferase class-I
BJD12_00740	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
BJD12_00750	PF02142	MGS-like domain
BJD12_00750	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BJD12_00750	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BJD12_00755	PF01272	Transcription elongation factor, GreA/GreB, C-term
BJD12_00755	PF03449	Transcription elongation factor, N-terminal
BJD12_00765	PF01368	DHH family
BJD12_00765	PF02272	DHHA1 domain
BJD12_00770	PF06674	BJD12_00770
BJD12_00775	PF01757	BJD12_00775
BJD12_00780	PF04397	LytTr DNA-binding domain
BJD12_00785	PF00472	RF-1 domain
BJD12_00785	PF03462	PCRF domain
BJD12_00790	PF00152	tRNA synthetases class II (D, K and N)
BJD12_00790	PF01336	OB-fold nucleic acid binding domain
BJD12_00795	PF00072	Response regulator receiver domain
BJD12_00795	PF01966	HD domain
BJD12_00805	PF00072	Response regulator receiver domain
BJD12_00805	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_00805	PF01627	Hpt domain
BJD12_00805	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_00810	PF00378	Enoyl-CoA hydratase/isomerase family
BJD12_00815	PF00501	AMP-binding enzyme
BJD12_00815	PF13193	AMP-binding enzyme C-terminal domain
BJD12_00825	PF00330	Aconitase family (aconitate hydratase)
BJD12_00825	PF00694	Aconitase C-terminal domain
BJD12_00830	PF04014	Antidote-toxin recognition MazE
BJD12_00835	PF01850	PIN domain
BJD12_00840	PF00330	Aconitase family (aconitate hydratase)
BJD12_00840	PF06434	Aconitate hydratase 2 N-terminus
BJD12_00840	PF11791	Aconitate B N-terminal domain
BJD12_00845	PF00561	alpha/beta hydrolase fold
BJD12_00850	PF00563	EAL domain
BJD12_00850	PF00990	GGDEF domain
BJD12_00850	PF13185	GAF domain
BJD12_00850	PF13426	PAS domain
BJD12_00855	PF00072	Response regulator receiver domain
BJD12_00855	PF01339	CheB methylesterase
BJD12_00860	PF03975	CheD chemotactic sensory transduction
BJD12_00865	PF01739	CheR methyltransferase, SAM binding domain
BJD12_00865	PF03705	CheR methyltransferase, all-alpha domain
BJD12_00870	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_00870	PF00672	HAMP domain
BJD12_00870	PF12729	BJD12_00870
BJD12_00880	PF01584	CheW-like domain
BJD12_00885	PF07238	PilZ domain
BJD12_00885	PF07317	Flagellar regulator YcgR
BJD12_00895	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_00895	PF17201	BJD12_00895
BJD12_00900	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_00900	PF00672	HAMP domain
BJD12_00900	PF12729	BJD12_00900
BJD12_00905	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_00905	PF00672	HAMP domain
BJD12_00910	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_00910	PF00672	HAMP domain
BJD12_00910	PF12729	BJD12_00910
BJD12_00915	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_00915	PF12729	BJD12_00915
BJD12_00920	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_00925	PF13557	BJD12_00925
BJD12_00930	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_00930	PF00672	HAMP domain
BJD12_00930	PF02743	Cache domain
BJD12_00935	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_00935	PF17200	BJD12_00935
BJD12_00945	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_00945	PF00672	HAMP domain
BJD12_00945	PF12729	BJD12_00945
BJD12_00950	PF01584	CheW-like domain
BJD12_00950	PF01627	Hpt domain
BJD12_00950	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_00950	PF02895	Signal transducing histidine kinase, homodimeric domain
BJD12_00955	PF00072	Response regulator receiver domain
BJD12_00960	PF13466	STAS domain
BJD12_00965	PF01584	CheW-like domain
BJD12_00970	PF13614	AAA domain
BJD12_00975	PF00691	OmpA family
BJD12_00975	PF13677	BJD12_00975
BJD12_00980	PF01618	BJD12_00980
BJD12_00990	PF00593	TonB dependent receptor
BJD12_00990	PF07715	TonB-dependent Receptor Plug Domain
BJD12_01000	PF02902	Ulp1 protease family, C-terminal catalytic domain
BJD12_01025	PF08845	BJD12_01025
BJD12_01035	PF01527	Transposase
BJD12_01040	PF13276	BJD12_01040
BJD12_01040	PF13683	BJD12_01040
BJD12_01055	PF01584	CheW-like domain
BJD12_01055	PF01627	Hpt domain
BJD12_01055	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_01055	PF02895	Signal transducing histidine kinase, homodimeric domain
BJD12_01060	PF04344	Chemotaxis phosphatase, CheZ
BJD12_01065	PF00072	Response regulator receiver domain
BJD12_01070	PF04539	Sigma-70 region 3
BJD12_01070	PF04542	Sigma-70 region 2
BJD12_01070	PF04545	Sigma-70, region 4
BJD12_01075	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
BJD12_01080	PF00448	SRP54-type protein, GTPase domain
BJD12_01085	PF00771	FHIPEP family
BJD12_01090	PF01312	FlhB HrpN YscU SpaS Family
BJD12_01095	PF00990	GGDEF domain
BJD12_01095	PF07494	Two component regulator propeller
BJD12_01095	PF07495	Y_Y_Y domain
BJD12_01105	PF00990	GGDEF domain
BJD12_01105	PF07494	Two component regulator propeller
BJD12_01105	PF07495	Y_Y_Y domain
BJD12_01110	PF01311	BJD12_01110
BJD12_01115	PF01313	BJD12_01115
BJD12_01125	PF00813	BJD12_01125
BJD12_01130	PF04347	BJD12_01130
BJD12_01135	PF01052	Surface presentation of antigens (SPOA)
BJD12_01140	PF01052	Surface presentation of antigens (SPOA)
BJD12_01140	PF02154	Flagellar motor switch protein FliM
BJD12_01145	PF03748	BJD12_01145
BJD12_01150	PF02120	Flagellar hook-length control protein FliK
BJD12_01155	PF02050	Flagellar FliJ protein
BJD12_01160	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BJD12_01165	PF02108	BJD12_01165
BJD12_01170	PF01706	FliG C-terminal domain
BJD12_01170	PF14841	FliG middle domain
BJD12_01170	PF14842	FliG N-terminal domain
BJD12_01175	PF01514	Secretory protein of YscJ/FliF family
BJD12_01175	PF08345	BJD12_01175
BJD12_01180	PF02049	BJD12_01180
BJD12_01190	PF00535	Glycosyl transferase family 2
BJD12_01195	PF13489	Methyltransferase domain
BJD12_01205	PF05050	Methyltransferase FkbM domain
BJD12_01210	PF00132	Bacterial transferase hexapeptide (six repeats)
BJD12_01215	PF00355	Rieske [2Fe-2S] domain
BJD12_01215	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
BJD12_01220	PF00132	Bacterial transferase hexapeptide (six repeats)
BJD12_01225	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_01230	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_01235	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
BJD12_01235	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
BJD12_01245	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
BJD12_01250	PF00158	Sigma-54 interaction domain
BJD12_01250	PF02954	Bacterial regulatory protein, Fis family
BJD12_01250	PF06490	BJD12_01250
BJD12_01255	PF00072	Response regulator receiver domain
BJD12_01260	PF00309	BJD12_01260
BJD12_01260	PF04552	Sigma-54, DNA binding domain
BJD12_01260	PF04963	Sigma-54 factor, core binding domain
BJD12_01265	PF00072	Response regulator receiver domain
BJD12_01265	PF00196	Bacterial regulatory proteins, luxR family
BJD12_01270	PF16823	BJD12_01270
BJD12_01280	PF02561	Flagellar protein FliS
BJD12_01285	PF02465	BJD12_01285
BJD12_01285	PF07195	BJD12_01285
BJD12_01285	PF07196	Flagellin hook IN motif
BJD12_01290	PF00669	Bacterial flagellin N-terminal helical region
BJD12_01290	PF00700	Bacterial flagellin C-terminal helical region
BJD12_01290	PF07196	Flagellin hook IN motif
BJD12_01295	PF00669	Bacterial flagellin N-terminal helical region
BJD12_01295	PF00700	Bacterial flagellin C-terminal helical region
BJD12_01300	PF00460	Flagella basal body rod protein
BJD12_01300	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BJD12_01305	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
BJD12_01305	PF10135	BJD12_01305
BJD12_01310	PF02119	BJD12_01310
BJD12_01315	PF02107	BJD12_01315
BJD12_01320	PF00460	Flagella basal body rod protein
BJD12_01320	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BJD12_01335	PF00460	Flagella basal body rod protein
BJD12_01335	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BJD12_01340	PF00460	Flagella basal body rod protein
BJD12_01340	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BJD12_01340	PF07559	Flagellar basal body protein FlaE
BJD12_01345	PF03963	BJD12_01345
BJD12_01345	PF13860	FlgD Ig-like domain
BJD12_01345	PF13861	FlgD Tudor-like domain
BJD12_01350	PF00460	Flagella basal body rod protein
BJD12_01350	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BJD12_01355	PF00460	Flagella basal body rod protein
BJD12_01360	PF00072	Response regulator receiver domain
BJD12_01360	PF01584	CheW-like domain
BJD12_01365	PF13144	SAF-like
BJD12_01370	PF04316	Anti-sigma-28 factor, FlgM
BJD12_01380	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_01380	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_01385	PF00072	Response regulator receiver domain
BJD12_01385	PF00563	EAL domain
BJD12_01385	PF00990	GGDEF domain
BJD12_01390	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_01390	PF07730	Histidine kinase
BJD12_01390	PF08448	PAS fold
BJD12_01390	PF13426	PAS domain
BJD12_01395	PF00563	EAL domain
BJD12_01395	PF00990	GGDEF domain
BJD12_01395	PF08447	PAS fold
BJD12_01395	PF13426	PAS domain
BJD12_01410	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_01415	PF04356	Protein of unknown function (DUF489)
BJD12_01420	PF03054	tRNA methyl transferase
BJD12_01425	PF00293	NUDIX domain
BJD12_01430	PF02617	ATP-dependent Clp protease adaptor protein ClpS
BJD12_01435	PF00004	ATPase family associated with various cellular activities (AAA)
BJD12_01435	PF02861	Clp amino terminal domain
BJD12_01435	PF07724	AAA domain (Cdc48 subfamily)
BJD12_01435	PF10431	C-terminal, D2-small domain, of ClpB protein
BJD12_01445	PF01176	Translation initiation factor 1A / IF-1
BJD12_01450	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
BJD12_01455	PF04339	BJD12_01455
BJD12_01460	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BJD12_01465	PF01580	FtsK/SpoIIIE family
BJD12_01465	PF09397	Ftsk gamma domain
BJD12_01465	PF13491	BJD12_01465
BJD12_01470	PF01841	Transglutaminase-like superfamily
BJD12_01470	PF12969	Domain of Unknown Function with PDB structure (DUF3857)
BJD12_01475	PF03548	Outer membrane lipoprotein carrier protein LolA
BJD12_01480	PF00004	ATPase family associated with various cellular activities (AAA)
BJD12_01480	PF12002	MgsA AAA+ ATPase C terminal
BJD12_01480	PF16193	BJD12_01480
BJD12_01485	PF02537	BJD12_01485
BJD12_01490	PF00108	Thiolase, N-terminal domain
BJD12_01490	PF02803	Thiolase, C-terminal domain
BJD12_01495	PF00378	Enoyl-CoA hydratase/isomerase family
BJD12_01495	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
BJD12_01495	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
BJD12_01500	PF00440	Bacterial regulatory proteins, tetR family
BJD12_01505	PF00334	Nucleoside diphosphate kinase
BJD12_01510	PF04055	Radical SAM superfamily
BJD12_01515	PF13432	Tetratricopeptide repeat
BJD12_01520	PF13413	Helix-turn-helix domain
BJD12_01520	PF13464	BJD12_01520
BJD12_01525	PF09976	Tetratricopeptide repeat
BJD12_01530	PF01011	PQQ enzyme repeat
BJD12_01530	PF13360	PQQ-like domain
BJD12_01535	PF01926	50S ribosome-binding GTPase
BJD12_01535	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
BJD12_01540	PF00994	Probable molybdopterin binding domain
BJD12_01540	PF03453	MoeA N-terminal region (domain I and II)
BJD12_01540	PF03454	MoeA C-terminal region (domain IV)
BJD12_01545	PF00581	Rhodanese-like domain
BJD12_01545	PF00899	ThiF family
BJD12_01550	PF13628	BJD12_01550
BJD12_01555	PF06884	BJD12_01555
BJD12_01560	PF03372	Endonuclease/Exonuclease/phosphatase family
BJD12_01570	PF00994	Probable molybdopterin binding domain
BJD12_01570	PF03453	MoeA N-terminal region (domain I and II)
BJD12_01575	PF12804	MobA-like NTP transferase domain
BJD12_01585	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BJD12_01585	PF10414	Sirohaem synthase dimerisation region
BJD12_01585	PF13241	Putative NAD(P)-binding
BJD12_01585	PF14824	Sirohaem biosynthesis protein central
BJD12_01590	PF00072	Response regulator receiver domain
BJD12_01590	PF03861	ANTAR domain
BJD12_01595	PF13379	NMT1-like family
BJD12_01605	PF07690	Major Facilitator Superfamily
BJD12_01610	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
BJD12_01610	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
BJD12_01610	PF04324	BFD-like [2Fe-2S] binding domain
BJD12_01610	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BJD12_01615	PF13806	Rieske-like [2Fe-2S] domain
BJD12_01620	PF00384	Molybdopterin oxidoreductase
BJD12_01620	PF01568	Molydopterin dinucleotide binding domain
BJD12_01620	PF04324	BFD-like [2Fe-2S] binding domain
BJD12_01620	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
BJD12_01625	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BJD12_01630	PF10685	BJD12_01630
BJD12_01635	PF05974	Domain of unknown function (DUF892)
BJD12_01640	PF10994	Protein of unknown function (DUF2817)
BJD12_01645	PF00563	EAL domain
BJD12_01650	PF12951	BJD12_01650
BJD12_01650	PF13018	BJD12_01650
BJD12_01655	PF00082	Subtilase family
BJD12_01655	PF03797	Autotransporter beta-domain
BJD12_01655	PF12951	BJD12_01655
BJD12_01660	PF02627	Carboxymuconolactone decarboxylase family
BJD12_01675	PF07995	Glucose / Sorbosone dehydrogenase
BJD12_01685	PF00565	Staphylococcal nuclease homologue
BJD12_01690	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BJD12_01705	PF13421	BJD12_01705
BJD12_01715	PF09335	BJD12_01715
BJD12_01725	PF00440	Bacterial regulatory proteins, tetR family
BJD12_01730	PF07081	Protein of unknown function (DUF1349)
BJD12_01735	PF07690	Major Facilitator Superfamily
BJD12_01740	PF00106	short chain dehydrogenase
BJD12_01745	PF13372	Alginate export
BJD12_01755	PF07235	BJD12_01755
BJD12_01760	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BJD12_01765	PF02585	GlcNAc-PI de-N-acetylase
BJD12_01770	PF05401	Nodulation protein S (NodS)
BJD12_01775	PF00535	Glycosyl transferase family 2
BJD12_01780	PF12697	Alpha/beta hydrolase family
BJD12_01785	PF00732	GMC oxidoreductase
BJD12_01785	PF05199	GMC oxidoreductase
BJD12_01790	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_01795	PF02517	CAAX protease self-immunity
BJD12_01805	PF02627	Carboxymuconolactone decarboxylase family
BJD12_01815	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_01820	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_01820	PF03466	LysR substrate binding domain
BJD12_01825	PF02517	CAAX protease self-immunity
BJD12_01835	PF01129	NAD:arginine ADP-ribosyltransferase
BJD12_01840	PF00665	Integrase core domain
BJD12_01840	PF13276	BJD12_01840
BJD12_01845	PF01527	Transposase
BJD12_01880	PF11740	BJD12_01880
BJD12_01900	PF01527	Transposase
BJD12_01905	PF13583	Metallo-peptidase family M12B Reprolysin-like
BJD12_01910	PF13229	Right handed beta helix region
BJD12_01910	PF16380	BJD12_01910
BJD12_01925	PF00589	Phage integrase family
BJD12_01930	PF11740	BJD12_01930
BJD12_01940	PF16473	BJD12_01940
BJD12_01955	PF12375	BJD12_01955
BJD12_01960	PF01381	Helix-turn-helix
BJD12_01960	PF12472	BJD12_01960
BJD12_01965	PF02486	BJD12_01965
BJD12_01970	PF02303	Helix-destabilising protein
BJD12_01990	PF10734	BJD12_01990
BJD12_01995	PF05707	Zonular occludens toxin (Zot)
BJD12_02015	PF05857	BJD12_02015
BJD12_02025	PF01106	NifU-like domain
BJD12_02030	PF01329	Pterin 4 alpha carbinolamine dehydratase
BJD12_02035	PF03544	Gram-negative bacterial TonB protein C-terminal
BJD12_02040	PF02535	BJD12_02040
BJD12_02045	PF11737	BJD12_02045
BJD12_02050	PF00849	RNA pseudouridylate synthase
BJD12_02050	PF01479	S4 domain
BJD12_02055	PF00575	S1 RNA binding domain
BJD12_02055	PF10150	Ribonuclease E/G family
BJD12_02060	PF00072	Response regulator receiver domain
BJD12_02060	PF00196	Bacterial regulatory proteins, luxR family
BJD12_02065	PF00581	Rhodanese-like domain
BJD12_02075	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
BJD12_02080	PF03486	HI0933-like protein
BJD12_02085	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
BJD12_02085	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
BJD12_02085	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
BJD12_02110	PF01066	CDP-alcohol phosphatidyltransferase
BJD12_02115	PF01541	GIY-YIG catalytic domain
BJD12_02115	PF02151	UvrB/uvrC motif
BJD12_02115	PF08459	UvrC Helix-hairpin-helix N-terminal
BJD12_02120	PF01436	NHL repeat
BJD12_02125	PF01451	Low molecular weight phosphotyrosine protein phosphatase
BJD12_02130	PF02348	Cytidylyltransferase
BJD12_02135	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
BJD12_02140	PF00005	ABC transporter
BJD12_02140	PF00664	ABC transporter transmembrane region
BJD12_02145	PF02472	Biopolymer transport protein ExbD/TolR
BJD12_02150	PF01618	BJD12_02150
BJD12_02155	PF00753	Metallo-beta-lactamase superfamily
BJD12_02155	PF03772	BJD12_02155
BJD12_02155	PF13567	BJD12_02155
BJD12_02160	PF01370	NAD dependent epimerase/dehydratase family
BJD12_02170	PF00005	ABC transporter
BJD12_02175	PF02687	BJD12_02175
BJD12_02175	PF12704	MacB-like periplasmic core domain
BJD12_02185	PF03937	Flavinator of succinate dehydrogenase
BJD12_02190	PF13085	2Fe-2S iron-sulfur cluster binding domain
BJD12_02190	PF13534	4Fe-4S dicluster domain
BJD12_02200	PF00890	FAD binding domain
BJD12_02200	PF02910	Fumarate reductase flavoprotein C-term
BJD12_02205	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
BJD12_02210	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
BJD12_02215	PF07896	Protein of unknown function (DUF1674)
BJD12_02220	PF01571	Aminomethyltransferase folate-binding domain
BJD12_02220	PF08669	Glycine cleavage T-protein C-terminal barrel domain
BJD12_02225	PF00005	ABC transporter
BJD12_02225	PF08402	TOBE domain
BJD12_02230	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
BJD12_02230	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
BJD12_02235	PF02685	Glucokinase
BJD12_02240	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
BJD12_02245	PF00920	Dehydratase family
BJD12_02250	PF01081	KDPG and KHG aldolase
BJD12_02255	PF00873	AcrB/AcrD/AcrF family
BJD12_02260	PF00873	AcrB/AcrD/AcrF family
BJD12_02265	PF00529	HlyD family secretion protein
BJD12_02265	PF16576	BJD12_02265
BJD12_02270	PF00034	Cytochrome c
BJD12_02275	PF00034	Cytochrome c
BJD12_02310	PF00072	Response regulator receiver domain
BJD12_02315	PF00072	Response regulator receiver domain
BJD12_02315	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_02315	PF01590	GAF domain
BJD12_02315	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_02315	PF08447	PAS fold
BJD12_02315	PF08448	PAS fold
BJD12_02315	PF13185	GAF domain
BJD12_02320	PF00575	S1 RNA binding domain
BJD12_02320	PF09371	Tex-like protein N-terminal domain
BJD12_02320	PF12836	Helix-hairpin-helix motif
BJD12_02320	PF16921	BJD12_02320
BJD12_02330	PF01266	FAD dependent oxidoreductase
BJD12_02340	PF04024	BJD12_02340
BJD12_02345	PF00561	alpha/beta hydrolase fold
BJD12_02350	PF09712	BJD12_02350
BJD12_02355	PF01066	CDP-alcohol phosphatidyltransferase
BJD12_02360	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_02365	PF00293	NUDIX domain
BJD12_02370	PF06853	BJD12_02370
BJD12_02375	PF03618	BJD12_02375
BJD12_02380	PF00391	PEP-utilising enzyme, mobile domain
BJD12_02380	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
BJD12_02380	PF02896	PEP-utilising enzyme, TIM barrel domain
BJD12_02385	PF00924	Mechanosensitive ion channel
BJD12_02390	PF00929	Exonuclease
BJD12_02395	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BJD12_02400	PF01325	Iron dependent repressor, N-terminal DNA binding domain
BJD12_02400	PF02742	Iron dependent repressor, metal binding and dimerisation domain
BJD12_02405	PF01566	BJD12_02405
BJD12_02410	PF00561	alpha/beta hydrolase fold
BJD12_02420	PF05977	Transmembrane secretion effector
BJD12_02425	PF07969	Amidohydrolase family
BJD12_02430	PF07681	BJD12_02430
BJD12_02435	PF00857	Isochorismatase family
BJD12_02440	PF12833	Helix-turn-helix domain
BJD12_02445	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_02445	PF07495	Y_Y_Y domain
BJD12_02445	PF07730	Histidine kinase
BJD12_02450	PF00072	Response regulator receiver domain
BJD12_02450	PF00196	Bacterial regulatory proteins, luxR family
BJD12_02455	PF17201	BJD12_02455
BJD12_02465	PF00117	Glutamine amidotransferase class-I
BJD12_02465	PF00958	GMP synthase C terminal domain
BJD12_02465	PF02540	NAD synthase
BJD12_02470	PF00478	IMP dehydrogenase / GMP reductase domain
BJD12_02470	PF00571	CBS domain
BJD12_02475	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
BJD12_02475	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
BJD12_02480	PF06844	Protein of unknown function (DUF1244)
BJD12_02485	PF00999	Sodium/hydrogen exchanger family
BJD12_02485	PF02254	TrkA-N domain
BJD12_02490	PF00483	Nucleotidyl transferase
BJD12_02495	PF02719	Polysaccharide biosynthesis protein
BJD12_02495	PF13727	CoA-binding domain
BJD12_02500	PF00953	Glycosyl transferase family 4
BJD12_02505	PF13432	Tetratricopeptide repeat
BJD12_02510	PF06305	BJD12_02510
BJD12_02515	PF00216	Bacterial DNA-binding protein
BJD12_02520	PF00575	S1 RNA binding domain
BJD12_02525	PF02224	Cytidylate kinase
BJD12_02530	PF00444	Ribosomal protein L36
BJD12_02540	PF04371	Porphyromonas-type peptidyl-arginine deiminase
BJD12_02545	PF00795	Carbon-nitrogen hydrolase
BJD12_02550	PF13420	Acetyltransferase (GNAT) domain
BJD12_02555	PF01963	BJD12_02555
BJD12_02560	PF03372	Endonuclease/Exonuclease/phosphatase family
BJD12_02565	PF00754	F5/8 type C domain
BJD12_02570	PF00528	Binding-protein-dependent transport system inner membrane component
BJD12_02575	PF00528	Binding-protein-dependent transport system inner membrane component
BJD12_02580	PF13416	Bacterial extracellular solute-binding protein
BJD12_02585	PF10091	Putative glucoamylase
BJD12_02590	PF00593	TonB dependent receptor
BJD12_02590	PF13620	Carboxypeptidase regulatory-like domain
BJD12_02595	PF00356	Bacterial regulatory proteins, lacI family
BJD12_02595	PF13377	Periplasmic binding protein-like domain
BJD12_02600	PF01722	BolA-like protein
BJD12_02605	PF03795	YCII-related domain
BJD12_02610	PF02616	ScpA/B protein
BJD12_02615	PF04079	Putative transcriptional regulators (Ypuh-like)
BJD12_02620	PF00849	RNA pseudouridylate synthase
BJD12_02620	PF01479	S4 domain
BJD12_02630	PF05096	Glutamine cyclotransferase
BJD12_02635	PF00795	Carbon-nitrogen hydrolase
BJD12_02645	PF00155	Aminotransferase class I and II
BJD12_02650	PF00005	ABC transporter
BJD12_02655	PF03379	BJD12_02655
BJD12_02660	PF01578	BJD12_02660
BJD12_02665	PF04995	BJD12_02665
BJD12_02670	PF03100	CcmE
BJD12_02675	PF01578	BJD12_02675
BJD12_02675	PF16327	BJD12_02675
BJD12_02680	PF08534	Redoxin
BJD12_02685	PF03918	Cytochrome C biogenesis protein
BJD12_02690	PF13432	Tetratricopeptide repeat
BJD12_02690	PF14559	Tetratricopeptide repeat
BJD12_02715	PF00561	alpha/beta hydrolase fold
BJD12_02720	PF06961	BJD12_02720
BJD12_02725	PF00005	ABC transporter
BJD12_02725	PF00664	ABC transporter transmembrane region
BJD12_02730	PF00005	ABC transporter
BJD12_02730	PF00664	ABC transporter transmembrane region
BJD12_02735	PF01654	BJD12_02735
BJD12_02740	PF02322	BJD12_02740
BJD12_02745	PF08173	BJD12_02745
BJD12_02755	PF07690	Major Facilitator Superfamily
BJD12_02760	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
BJD12_02760	PF08530	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BJD12_02765	PF00171	Aldehyde dehydrogenase family
BJD12_02770	PF00696	Amino acid kinase family
BJD12_02770	PF01472	PUA domain
BJD12_02775	PF03795	YCII-related domain
BJD12_02780	PF07883	Cupin domain
BJD12_02785	PF00206	Lyase
BJD12_02790	PF01118	Semialdehyde dehydrogenase, NAD binding domain
BJD12_02795	PF13302	Acetyltransferase (GNAT) domain
BJD12_02800	PF00696	Amino acid kinase family
BJD12_02800	PF04768	Protein of unknown function (DUF619)
BJD12_02805	PF01546	Peptidase family M20/M25/M40
BJD12_02805	PF07687	Peptidase dimerisation domain
BJD12_02810	PF13508	Acetyltransferase (GNAT) domain
BJD12_02815	PF00764	Arginosuccinate synthase
BJD12_02820	PF02566	OsmC-like protein
BJD12_02825	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
BJD12_02825	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
BJD12_02835	PF01406	tRNA synthetases class I (C) catalytic domain
BJD12_02835	PF09190	DALR domain
BJD12_02840	PF02657	Fe-S metabolism associated domain
BJD12_02845	PF05977	Transmembrane secretion effector
BJD12_02850	PF01258	Prokaryotic dksA/traR C4-type zinc finger
BJD12_02855	PF01809	BJD12_02855
BJD12_02860	PF01979	Amidohydrolase family
BJD12_02865	PF01551	Peptidase family M23
BJD12_02870	PF13520	Amino acid permease
BJD12_02875	PF06751	Ethanolamine ammonia lyase large subunit (EutB)
BJD12_02880	PF05985	Ethanolamine ammonia-lyase light chain (EutC)
BJD12_02885	PF11954	BJD12_02885
BJD12_02895	PF16242	BJD12_02895
BJD12_02905	PF00295	Glycosyl hydrolases family 28
BJD12_02915	PF13419	Haloacid dehalogenase-like hydrolase
BJD12_02920	PF13489	Methyltransferase domain
BJD12_02925	PF01979	Amidohydrolase family
BJD12_02935	PF01132	Elongation factor P (EF-P) OB domain
BJD12_02935	PF08207	Elongation factor P (EF-P) KOW-like domain
BJD12_02935	PF09285	Elongation factor P, C-terminal
BJD12_02940	PF04055	Radical SAM superfamily
BJD12_02940	PF13394	4Fe-4S single cluster domain
BJD12_02945	PF00563	EAL domain
BJD12_02945	PF00672	HAMP domain
BJD12_02945	PF00990	GGDEF domain
BJD12_02945	PF17203	BJD12_02945
BJD12_02950	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
BJD12_02955	PF00588	SpoU rRNA Methylase family
BJD12_02960	PF00459	Inositol monophosphatase family
BJD12_02965	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
BJD12_02965	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
BJD12_02970	PF00545	ribonuclease
BJD12_02975	PF01337	Barstar (barnase inhibitor)
BJD12_02985	PF00005	ABC transporter
BJD12_02985	PF12848	ABC transporter
BJD12_02985	PF16326	BJD12_02985
BJD12_02990	PF00270	DEAD/DEAH box helicase
BJD12_02990	PF00271	Helicase conserved C-terminal domain
BJD12_02990	PF03880	DbpA RNA binding domain
BJD12_03000	PF00156	Phosphoribosyl transferase domain
BJD12_03005	PF02696	BJD12_03005
BJD12_03010	PF00326	Prolyl oligopeptidase family
BJD12_03015	PF00043	Glutathione S-transferase, C-terminal domain
BJD12_03015	PF02798	Glutathione S-transferase, N-terminal domain
BJD12_03020	PF00313	'Cold-shock' DNA-binding domain
BJD12_03025	PF02639	BJD12_03025
BJD12_03030	PF07152	YaeQ protein
BJD12_03035	PF03486	HI0933-like protein
BJD12_03040	PF00563	EAL domain
BJD12_03040	PF00990	GGDEF domain
BJD12_03040	PF13188	PAS domain
BJD12_03045	PF01435	Peptidase family M48
BJD12_03050	PF00749	tRNA synthetases class I (E and Q), catalytic domain
BJD12_03055	PF00106	short chain dehydrogenase
BJD12_03060	PF05233	BJD12_03060
BJD12_03060	PF07879	BJD12_03060
BJD12_03065	PF01963	BJD12_03065
BJD12_03070	PF07920	Protein of unknown function (DUF1684)
BJD12_03075	PF01119	DNA mismatch repair protein, C-terminal domain
BJD12_03075	PF08676	MutL C terminal dimerisation domain
BJD12_03075	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_03080	PF01520	N-acetylmuramoyl-L-alanine amidase
BJD12_03080	PF11741	AMIN domain
BJD12_03085	PF02367	Uncharacterised P-loop hydrolase UPF0079
BJD12_03090	PF01256	Carbohydrate kinase
BJD12_03090	PF03853	YjeF-related protein N-terminus
BJD12_03095	PF08331	BJD12_03095
BJD12_03095	PF13484	BJD12_03095
BJD12_03100	PF02601	BJD12_03100
BJD12_03100	PF13742	BJD12_03100
BJD12_03105	PF06057	Bacterial virulence protein (VirJ)
BJD12_03110	PF03781	Sulfatase-modifying factor enzyme 1
BJD12_03120	PF00570	HRDC domain
BJD12_03120	PF01612	3'-5' exonuclease
BJD12_03125	PF01068	ATP dependent DNA ligase domain
BJD12_03125	PF04679	ATP dependent DNA ligase C terminal region
BJD12_03125	PF13298	DNA polymerase Ligase (LigD)
BJD12_03130	PF12244	BJD12_03130
BJD12_03135	PF00816	H-NS histone family
BJD12_03145	PF00589	Phage integrase family
BJD12_03145	PF13356	Domain of unknown function (DUF4102)
BJD12_03155	PF13992	BJD12_03155
BJD12_03160	PF01381	Helix-turn-helix
BJD12_03165	PF02195	ParB-like nuclease domain
BJD12_03170	PF05930	Prophage CP4-57 regulatory protein (AlpA)
BJD12_03175	PF00990	GGDEF domain
BJD12_03175	PF01590	GAF domain
BJD12_03180	PF01584	CheW-like domain
BJD12_03185	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_03185	PF00672	HAMP domain
BJD12_03185	PF12729	BJD12_03185
BJD12_03190	PF02245	Methylpurine-DNA glycosylase (MPG)
BJD12_03195	PF00270	DEAD/DEAH box helicase
BJD12_03195	PF00271	Helicase conserved C-terminal domain
BJD12_03195	PF08494	BJD12_03195
BJD12_03200	PF11743	BJD12_03200
BJD12_03210	PF04386	Stringent starvation protein B
BJD12_03215	PF00043	Glutathione S-transferase, C-terminal domain
BJD12_03215	PF13417	Glutathione S-transferase, N-terminal domain
BJD12_03220	PF02167	Cytochrome C1 family
BJD12_03225	PF00032	Cytochrome b(C-terminal)/b6/petD
BJD12_03225	PF00033	Cytochrome b(N-terminal)/b6/petB
BJD12_03230	PF00355	Rieske [2Fe-2S] domain
BJD12_03230	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
BJD12_03235	PF01464	Transglycosylase SLT domain
BJD12_03240	PF08279	HTH domain
BJD12_03240	PF13280	BJD12_03240
BJD12_03245	PF02798	Glutathione S-transferase, N-terminal domain
BJD12_03250	PF00919	Uncharacterized protein family UPF0004
BJD12_03250	PF01938	TRAM domain
BJD12_03250	PF04055	Radical SAM superfamily
BJD12_03255	PF02562	PhoH-like protein
BJD12_03265	PF02130	Uncharacterized protein family UPF0054
BJD12_03275	PF00571	CBS domain
BJD12_03275	PF03471	Transporter associated domain
BJD12_03280	PF13387	BJD12_03280
BJD12_03285	PF01544	CorA-like Mg2+ transporter protein
BJD12_03290	PF00171	Aldehyde dehydrogenase family
BJD12_03300	PF00528	Binding-protein-dependent transport system inner membrane component
BJD12_03305	PF00528	Binding-protein-dependent transport system inner membrane component
BJD12_03310	PF00005	ABC transporter
BJD12_03310	PF08402	TOBE domain
BJD12_03315	PF02321	Outer membrane efflux protein
BJD12_03320	PF07690	Major Facilitator Superfamily
BJD12_03325	PF13533	Biotin-lipoyl like
BJD12_03325	PF16576	BJD12_03325
BJD12_03330	PF13416	Bacterial extracellular solute-binding protein
BJD12_03335	PF00202	Aminotransferase class-III
BJD12_03345	PF00120	Glutamine synthetase, catalytic domain
BJD12_03350	PF07722	Peptidase C26
BJD12_03355	PF00120	Glutamine synthetase, catalytic domain
BJD12_03360	PF01266	FAD dependent oxidoreductase
BJD12_03365	PF00072	Response regulator receiver domain
BJD12_03365	PF00990	GGDEF domain
BJD12_03375	PF01814	Hemerythrin HHE cation binding domain
BJD12_03380	PF00083	Sugar (and other) transporter
BJD12_03380	PF07690	Major Facilitator Superfamily
BJD12_03395	PF00384	Molybdopterin oxidoreductase
BJD12_03395	PF01568	Molydopterin dinucleotide binding domain
BJD12_03400	PF02634	FdhD/NarQ family
BJD12_03405	PF07690	Major Facilitator Superfamily
BJD12_03410	PF00202	Aminotransferase class-III
BJD12_03420	PF04286	BJD12_03420
BJD12_03425	PF00072	Response regulator receiver domain
BJD12_03425	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_03425	PF01627	Hpt domain
BJD12_03425	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_03425	PF03924	CHASE domain
BJD12_03425	PF13426	PAS domain
BJD12_03430	PF00072	Response regulator receiver domain
BJD12_03430	PF13487	HD domain
BJD12_03435	PF07690	Major Facilitator Superfamily
BJD12_03440	PF00440	Bacterial regulatory proteins, tetR family
BJD12_03445	PF00106	short chain dehydrogenase
BJD12_03450	PF05088	BJD12_03450
BJD12_03450	PF12466	BJD12_03450
BJD12_03455	PF00440	Bacterial regulatory proteins, tetR family
BJD12_03455	PF14246	AefR-like transcriptional repressor, C-terminal region
BJD12_03460	PF16576	BJD12_03460
BJD12_03465	PF00873	AcrB/AcrD/AcrF family
BJD12_03480	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BJD12_03480	PF00381	PTS HPr component phosphorylation site
BJD12_03480	PF00391	PEP-utilising enzyme, mobile domain
BJD12_03480	PF02896	PEP-utilising enzyme, TIM barrel domain
BJD12_03480	PF05524	PEP-utilising enzyme, N-terminal
BJD12_03485	PF00294	pfkB family carbohydrate kinase
BJD12_03490	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BJD12_03495	PF04966	Carbohydrate-selective porin, OprB family
BJD12_03555	PF01337	Barstar (barnase inhibitor)
BJD12_03570	PF02355	Protein export membrane protein
BJD12_03570	PF07549	SecD/SecF GG Motif
BJD12_03575	PF02355	Protein export membrane protein
BJD12_03575	PF07549	SecD/SecF GG Motif
BJD12_03575	PF13721	SecD export protein N-terminal TM region
BJD12_03580	PF02699	Preprotein translocase subunit
BJD12_03585	PF01702	Queuine tRNA-ribosyltransferase
BJD12_03590	PF02547	Queuosine biosynthesis protein
BJD12_03595	PF01037	AsnC family
BJD12_03595	PF13412	Winged helix-turn-helix DNA-binding
BJD12_03600	PF00202	Aminotransferase class-III
BJD12_03605	PF04488	Glycosyltransferase sugar-binding region containing DXD motif
BJD12_03610	PF00149	Calcineurin-like phosphoesterase
BJD12_03610	PF16656	BJD12_03610
BJD12_03615	PF02333	Phytase
BJD12_03620	PF00593	TonB dependent receptor
BJD12_03620	PF07715	TonB-dependent Receptor Plug Domain
BJD12_03625	PF14681	Uracil phosphoribosyltransferase
BJD12_03630	PF00759	Glycosyl hydrolase family 9
BJD12_03630	PF02927	N-terminal ig-like domain of cellulase
BJD12_03640	PF00037	4Fe-4S binding domain
BJD12_03655	PF01467	Cytidylyltransferase
BJD12_03660	PF03602	Conserved hypothetical protein 95
BJD12_03665	PF00183	Hsp90 protein
BJD12_03665	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_03680	PF07944	Putative glycosyl hydrolase of unknown function (DUF1680)
BJD12_03685	PF00593	TonB dependent receptor
BJD12_03685	PF07715	TonB-dependent Receptor Plug Domain
BJD12_03695	PF00082	Subtilase family
BJD12_03695	PF09286	Pro-kumamolisin, activation domain
BJD12_03705	PF01301	Glycosyl hydrolases family 35
BJD12_03710	PF00326	Prolyl oligopeptidase family
BJD12_03710	PF00930	Dipeptidyl peptidase IV (DPP IV) N-terminal region
BJD12_03715	PF13520	Amino acid permease
BJD12_03720	PF05960	Bacterial protein of unknown function (DUF885)
BJD12_03725	PF05960	Bacterial protein of unknown function (DUF885)
BJD12_03730	PF00557	Metallopeptidase family M24
BJD12_03730	PF01321	Creatinase/Prolidase N-terminal domain
BJD12_03735	PF00171	Aldehyde dehydrogenase family
BJD12_03740	PF00701	Dihydrodipicolinate synthetase family
BJD12_03745	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BJD12_03750	PF13510	2Fe-2S iron-sulfur cluster binding domain
BJD12_03755	PF01266	FAD dependent oxidoreductase
BJD12_03760	PF05544	Proline racemase
BJD12_03765	PF08448	PAS fold
BJD12_03765	PF12833	Helix-turn-helix domain
BJD12_03770	PF00448	SRP54-type protein, GTPase domain
BJD12_03770	PF02881	SRP54-type protein, helical bundle domain
BJD12_03780	PF00633	Helix-hairpin-helix motif
BJD12_03780	PF00730	HhH-GPD superfamily base excision DNA repair protein
BJD12_03780	PF14815	NUDIX domain
BJD12_03785	PF04362	Bacterial Fe(2+) trafficking
BJD12_03790	PF12395	BJD12_03790
BJD12_03795	PF00072	Response regulator receiver domain
BJD12_03795	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_03795	PF13426	PAS domain
BJD12_03800	PF10294	Putative methyltransferase
BJD12_03815	PF03572	Peptidase family S41
BJD12_03830	PF08212	Lipocalin-like domain
BJD12_03835	PF03168	Late embryogenesis abundant protein
BJD12_03840	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BJD12_03840	PF02770	Acyl-CoA dehydrogenase, middle domain
BJD12_03840	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BJD12_03840	PF12418	BJD12_03840
BJD12_03840	PF12806	BJD12_03840
BJD12_03845	PF14279	BJD12_03845
BJD12_03850	PF02779	Transketolase, pyrimidine binding domain
BJD12_03850	PF02780	Transketolase, C-terminal domain
BJD12_03850	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
BJD12_03855	PF04101	Glycosyltransferase family 28 C-terminal domain
BJD12_03865	PF13506	Glycosyl transferase family 21
BJD12_03870	PF01370	NAD dependent epimerase/dehydratase family
BJD12_03875	PF00753	Metallo-beta-lactamase superfamily
BJD12_03880	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
BJD12_03880	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
BJD12_03885	PF01963	BJD12_03885
BJD12_03890	PF06172	Cupin superfamily (DUF985)
BJD12_03900	PF03808	BJD12_03900
BJD12_03905	PF04230	BJD12_03905
BJD12_03915	PF13440	BJD12_03915
BJD12_03920	PF13692	Glycosyl transferases group 1
BJD12_03925	PF00534	Glycosyl transferases group 1
BJD12_03925	PF13439	Glycosyltransferase Family 4
BJD12_03930	PF01757	BJD12_03930
BJD12_03935	PF01757	BJD12_03935
BJD12_03945	PF02397	BJD12_03945
BJD12_03945	PF13727	CoA-binding domain
BJD12_03950	PF02706	Chain length determinant protein
BJD12_03950	PF13807	BJD12_03950
BJD12_03955	PF02563	Polysaccharide biosynthesis/export protein
BJD12_03955	PF10531	SLBB domain
BJD12_03965	PF13411	MerR HTH family regulatory protein
BJD12_03970	PF00216	Bacterial DNA-binding protein
BJD12_03975	PF01588	Putative tRNA binding domain
BJD12_03975	PF03147	Ferredoxin-fold anticodon binding domain
BJD12_03975	PF03483	B3/4 domain
BJD12_03975	PF03484	tRNA synthetase B5 domain
BJD12_03980	PF01409	tRNA synthetases class II core domain (F)
BJD12_03980	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
BJD12_03985	PF00453	Ribosomal protein L20
BJD12_03990	PF01632	Ribosomal protein L35
BJD12_03995	PF00707	Translation initiation factor IF-3, C-terminal domain
BJD12_03995	PF05198	Translation initiation factor IF-3, N-terminal domain
BJD12_04000	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BJD12_04000	PF02824	TGS domain
BJD12_04000	PF03129	Anticodon binding domain
BJD12_04000	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BJD12_04005	PF00356	Bacterial regulatory proteins, lacI family
BJD12_04005	PF13377	Periplasmic binding protein-like domain
BJD12_04010	PF00128	Alpha amylase, catalytic domain
BJD12_04015	PF07690	Major Facilitator Superfamily
BJD12_04025	PF10566	Glycoside hydrolase 97
BJD12_04025	PF14508	Glycosyl-hydrolase 97 N-terminal
BJD12_04025	PF14509	Glycosyl-hydrolase 97 C-terminal, oligomerisation
BJD12_04030	PF07715	TonB-dependent Receptor Plug Domain
BJD12_04030	PF14905	Outer membrane protein beta-barrel family
BJD12_04040	PF00128	Alpha amylase, catalytic domain
BJD12_04045	PF13683	BJD12_04045
BJD12_04050	PF01527	Transposase
BJD12_04055	PF01839	FG-GAP repeat
BJD12_04060	PF13827	BJD12_04060
BJD12_04070	PF04610	BJD12_04070
BJD12_04075	PF13827	BJD12_04075
BJD12_04080	PF04610	BJD12_04080
BJD12_04090	PF03135	BJD12_04090
BJD12_04095	PF05101	BJD12_04095
BJD12_04100	PF04956	BJD12_04100
BJD12_04105	PF01464	Transglycosylase SLT domain
BJD12_04110	PF00437	Type II/IV secretion system protein
BJD12_04115	PF03743	Bacterial conjugation TrbI-like protein
BJD12_04120	PF03524	Conjugal transfer protein
BJD12_04125	PF04335	VirB8 protein
BJD12_04130	PF10671	Toxin co-regulated pilus biosynthesis protein Q
BJD12_04135	PF02534	Type IV secretory system Conjugative DNA transfer
BJD12_04150	PF00271	Helicase conserved C-terminal domain
BJD12_04150	PF02151	UvrB/uvrC motif
BJD12_04150	PF04851	Type III restriction enzyme, res subunit
BJD12_04150	PF12344	Ultra-violet resistance protein B
BJD12_04155	PF07963	Prokaryotic N-terminal methylation motif
BJD12_04155	PF12019	Type II transport protein GspH
BJD12_04165	PF07963	Prokaryotic N-terminal methylation motif
BJD12_04165	PF16732	BJD12_04165
BJD12_04170	PF05567	Neisseria PilC beta-propeller domain
BJD12_04180	PF13681	BJD12_04180
BJD12_04180	PF14341	BJD12_04180
BJD12_04185	PF16074	BJD12_04185
BJD12_04190	PF07963	Prokaryotic N-terminal methylation motif
BJD12_04195	PF07963	Prokaryotic N-terminal methylation motif
BJD12_04195	PF12019	Type II transport protein GspH
BJD12_04200	PF06580	BJD12_04200
BJD12_04205	PF03641	Possible lysine decarboxylase
BJD12_04205	PF11892	Domain of unknown function (DUF3412)
BJD12_04205	PF14793	Domain of unknown function (DUF4478)
BJD12_04210	PF07715	TonB-dependent Receptor Plug Domain
BJD12_04210	PF13620	Carboxypeptidase regulatory-like domain
BJD12_04215	PF01914	BJD12_04215
BJD12_04220	PF00106	short chain dehydrogenase
BJD12_04225	PF00462	Glutaredoxin
BJD12_04230	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
BJD12_04230	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
BJD12_04235	PF02222	ATP-grasp domain
BJD12_04240	PF00731	AIR carboxylase
BJD12_04245	PF03966	Trm112p-like protein
BJD12_04250	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
BJD12_04250	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
BJD12_04255	PF10030	BJD12_04255
BJD12_04260	PF00013	KH domain
BJD12_04260	PF00575	S1 RNA binding domain
BJD12_04260	PF01138	3' exoribonuclease family, domain 1
BJD12_04260	PF03725	3' exoribonuclease family, domain 2
BJD12_04260	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
BJD12_04265	PF00312	Ribosomal protein S15
BJD12_04270	PF01509	TruB family pseudouridylate synthase (N terminal domain)
BJD12_04270	PF09157	Pseudouridine synthase II TruB, C-terminal
BJD12_04270	PF16198	BJD12_04270
BJD12_04275	PF02033	Ribosome-binding factor A
BJD12_04280	PF00009	Elongation factor Tu GTP binding domain
BJD12_04280	PF04760	Translation initiation factor IF-2, N-terminal region
BJD12_04280	PF08364	BJD12_04280
BJD12_04280	PF11987	Translation-initiation factor 2
BJD12_04285	PF00575	S1 RNA binding domain
BJD12_04285	PF08529	NusA N-terminal domain
BJD12_04285	PF13184	NusA-like KH domain
BJD12_04285	PF14520	Helix-hairpin-helix domain
BJD12_04290	PF02576	Uncharacterised BCR, YhbC family COG0779
BJD12_04290	PF17384	BJD12_04290
BJD12_04300	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
BJD12_04305	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
BJD12_04310	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
BJD12_04310	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
BJD12_04315	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
BJD12_04320	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
BJD12_04325	PF12838	4Fe-4S dicluster domain
BJD12_04330	PF00146	NADH dehydrogenase
BJD12_04335	PF00384	Molybdopterin oxidoreductase
BJD12_04335	PF01568	Molydopterin dinucleotide binding domain
BJD12_04335	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BJD12_04335	PF13510	2Fe-2S iron-sulfur cluster binding domain
BJD12_04340	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
BJD12_04340	PF10531	SLBB domain
BJD12_04340	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
BJD12_04345	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin
BJD12_04350	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
BJD12_04355	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
BJD12_04360	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
BJD12_04365	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
BJD12_04375	PF03840	Preprotein translocase SecG subunit
BJD12_04380	PF00121	Triosephosphate isomerase
BJD12_04385	PF00106	short chain dehydrogenase
BJD12_04395	PF01152	Bacterial-like globin
BJD12_04400	PF11231	BJD12_04400
BJD12_04405	PF00563	EAL domain
BJD12_04405	PF00672	HAMP domain
BJD12_04405	PF00990	GGDEF domain
BJD12_04405	PF14827	Sensory domain of two-component sensor kinase
BJD12_04415	PF03171	2OG-Fe(II) oxygenase superfamily
BJD12_04415	PF14226	non-haem dioxygenase in morphine synthesis N-terminal
BJD12_04420	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
BJD12_04420	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
BJD12_04420	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
BJD12_04420	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
BJD12_04425	PF01039	Carboxyl transferase domain
BJD12_04430	PF00290	Tryptophan synthase alpha chain
BJD12_04440	PF00291	Pyridoxal-phosphate dependent enzyme
BJD12_04445	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_04445	PF03466	LysR substrate binding domain
BJD12_04450	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
BJD12_04455	PF01416	tRNA pseudouridine synthase
BJD12_04460	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BJD12_04470	PF01118	Semialdehyde dehydrogenase, NAD binding domain
BJD12_04470	PF02774	Semialdehyde dehydrogenase, dimerisation domain
BJD12_04475	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BJD12_04475	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BJD12_04480	PF01264	Chorismate synthase
BJD12_04490	PF05175	Methyltransferase small domain
BJD12_04495	PF02630	SCO1/SenC
BJD12_04500	PF02666	BJD12_04500
BJD12_04510	PF01464	Transglycosylase SLT domain
BJD12_04510	PF01476	LysM domain
BJD12_04515	PF05872	BJD12_04515
BJD12_04525	PF00293	NUDIX domain
BJD12_04540	PF01694	Rhomboid family
BJD12_04555	PF01272	Transcription elongation factor, GreA/GreB, C-term
BJD12_04555	PF03449	Transcription elongation factor, N-terminal
BJD12_04560	PF00919	Uncharacterized protein family UPF0004
BJD12_04560	PF04055	Radical SAM superfamily
BJD12_04565	PF01738	Dienelactone hydrolase family
BJD12_04570	PF01230	HIT domain
BJD12_04585	PF00692	dUTPase
BJD12_04595	PF10609	ParA/MinD ATPase like
BJD12_04600	PF00593	TonB dependent receptor
BJD12_04600	PF07715	TonB-dependent Receptor Plug Domain
BJD12_04605	PF00593	TonB dependent receptor
BJD12_04605	PF07715	TonB-dependent Receptor Plug Domain
BJD12_04605	PF13620	Carboxypeptidase regulatory-like domain
BJD12_04610	PF01593	Flavin containing amine oxidoreductase
BJD12_04615	PF01431	Peptidase family M13
BJD12_04615	PF05649	Peptidase family M13
BJD12_04620	PF01431	Peptidase family M13
BJD12_04620	PF05649	Peptidase family M13
BJD12_04625	PF01431	Peptidase family M13
BJD12_04625	PF05649	Peptidase family M13
BJD12_04630	PF01694	Rhomboid family
BJD12_04635	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
BJD12_04640	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BJD12_04640	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BJD12_04645	PF01266	FAD dependent oxidoreductase
BJD12_04650	PF04235	BJD12_04650
BJD12_04655	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
BJD12_04660	PF00877	NlpC/P60 family
BJD12_04665	PF00877	NlpC/P60 family
BJD12_04670	PF16316	BJD12_04670
BJD12_04675	PF09359	VTC domain
BJD12_04680	PF13449	Esterase-like activity of phytase
BJD12_04685	PF07396	Phosphate-selective porin O and P
BJD12_04690	PF00072	Response regulator receiver domain
BJD12_04690	PF00158	Sigma-54 interaction domain
BJD12_04690	PF02954	Bacterial regulatory protein, Fis family
BJD12_04695	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_04695	PF00672	HAMP domain
BJD12_04695	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_04700	PF03061	Thioesterase superfamily
BJD12_04710	PF13649	Methyltransferase domain
BJD12_04715	PF00375	Sodium:dicarboxylate symporter family
BJD12_04720	PF00245	Alkaline phosphatase
BJD12_04725	PF01171	PP-loop family
BJD12_04725	PF09179	TilS substrate binding domain
BJD12_04725	PF11734	TilS substrate C-terminal domain
BJD12_04730	PF02609	Exonuclease VII small subunit
BJD12_04735	PF00348	Polyprenyl synthetase
BJD12_04745	PF14521	Lysine-specific metallo-endopeptidase
BJD12_04750	PF09685	BJD12_04750
BJD12_04755	PF01523	Putative modulator of DNA gyrase
BJD12_04760	PF04751	Protein of unknown function (DUF615)
BJD12_04765	PF01523	Putative modulator of DNA gyrase
BJD12_04775	PF13116	BJD12_04775
BJD12_04775	PF13502	BJD12_04775
BJD12_04780	PF10150	Ribonuclease E/G family
BJD12_04785	PF02545	Maf-like protein
BJD12_04790	PF04402	Protein of unknown function (DUF541)
BJD12_04795	PF00593	TonB dependent receptor
BJD12_04795	PF07715	TonB-dependent Receptor Plug Domain
BJD12_04795	PF13620	Carboxypeptidase regulatory-like domain
BJD12_04800	PF03544	Gram-negative bacterial TonB protein C-terminal
BJD12_04805	PF02590	Predicted SPOUT methyltransferase
BJD12_04810	PF05787	Bacterial protein of unknown function (DUF839)
BJD12_04815	PF02410	Oligomerisation domain
BJD12_04820	PF01467	Cytidylyltransferase
BJD12_04825	PF06144	DNA polymerase III, delta subunit
BJD12_04830	PF04390	Lipopolysaccharide-assembly
BJD12_04835	PF00133	tRNA synthetases class I (I, L, M and V)
BJD12_04835	PF08264	Anticodon-binding domain of tRNA
BJD12_04835	PF13603	Leucyl-tRNA synthetase, Domain 2
BJD12_04840	PF06197	BJD12_04840
BJD12_04845	PF00085	Thioredoxin
BJD12_04845	PF14559	Tetratricopeptide repeat
BJD12_04845	PF14561	Tetratricopeptide repeat
BJD12_04850	PF14539	Domain of unknown function (DUF4442)
BJD12_04855	PF04070	BJD12_04855
BJD12_04865	PF00892	EamA-like transporter family
BJD12_04870	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_04870	PF03466	LysR substrate binding domain
BJD12_04875	PF12840	Helix-turn-helix domain
BJD12_04880	PF11066	BJD12_04880
BJD12_04895	PF14257	BJD12_04895
BJD12_04900	PF04828	Glutathione-dependent formaldehyde-activating enzyme
BJD12_04905	PF05960	Bacterial protein of unknown function (DUF885)
BJD12_04910	PF00005	ABC transporter
BJD12_04910	PF00664	ABC transporter transmembrane region
BJD12_04915	PF07929	Plasmid pRiA4b ORF-3-like protein
BJD12_04920	PF00999	Sodium/hydrogen exchanger family
BJD12_04925	PF00144	Beta-lactamase
BJD12_04925	PF11954	BJD12_04925
BJD12_04930	PF03737	Demethylmenaquinone methyltransferase
BJD12_04935	PF00733	Asparagine synthase
BJD12_04935	PF13537	Glutamine amidotransferase domain
BJD12_04940	PF01904	Protein of unknown function DUF72
BJD12_04945	PF00892	EamA-like transporter family
BJD12_04950	PF00990	GGDEF domain
BJD12_04950	PF01590	GAF domain
BJD12_04955	PF00849	RNA pseudouridylate synthase
BJD12_04955	PF01479	S4 domain
BJD12_04960	PF00563	EAL domain
BJD12_04960	PF00990	GGDEF domain
BJD12_04965	PF00270	DEAD/DEAH box helicase
BJD12_04965	PF00271	Helicase conserved C-terminal domain
BJD12_04965	PF03880	DbpA RNA binding domain
BJD12_04970	PF13275	S4 domain
BJD12_04980	PF01494	FAD binding domain
BJD12_04985	PF01124	MAPEG family
BJD12_04990	PF13211	BJD12_04990
BJD12_05010	PF00730	HhH-GPD superfamily base excision DNA repair protein
BJD12_05010	PF02805	Metal binding domain of Ada
BJD12_05010	PF06029	AlkA N-terminal domain
BJD12_05010	PF12833	Helix-turn-helix domain
BJD12_05015	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
BJD12_05015	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
BJD12_05020	PF01663	Type I phosphodiesterase / nucleotide pyrophosphatase
BJD12_05025	PF00654	Voltage gated chloride channel
BJD12_05030	PF17067	BJD12_05030
BJD12_05035	PF03203	BJD12_05035
BJD12_05040	PF00593	TonB dependent receptor
BJD12_05040	PF07715	TonB-dependent Receptor Plug Domain
BJD12_05045	PF00593	TonB dependent receptor
BJD12_05045	PF07715	TonB-dependent Receptor Plug Domain
BJD12_05050	PF00082	Subtilase family
BJD12_05050	PF01483	Proprotein convertase P-domain
BJD12_05080	PF00082	Subtilase family
BJD12_05080	PF01483	Proprotein convertase P-domain
BJD12_05090	PF00248	Aldo/keto reductase family
BJD12_05095	PF07690	Major Facilitator Superfamily
BJD12_05100	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_05100	PF03466	LysR substrate binding domain
BJD12_05110	PF06719	BJD12_05110
BJD12_05110	PF12833	Helix-turn-helix domain
BJD12_05115	PF07883	Cupin domain
BJD12_05120	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_05120	PF03466	LysR substrate binding domain
BJD12_05125	PF00248	Aldo/keto reductase family
BJD12_05130	PF00440	Bacterial regulatory proteins, tetR family
BJD12_05130	PF14246	AefR-like transcriptional repressor, C-terminal region
BJD12_05135	PF02321	Outer membrane efflux protein
BJD12_05140	PF00873	AcrB/AcrD/AcrF family
BJD12_05145	PF16576	BJD12_05145
BJD12_05150	PF00440	Bacterial regulatory proteins, tetR family
BJD12_05150	PF14246	AefR-like transcriptional repressor, C-terminal region
BJD12_05155	PF01475	Ferric uptake regulator family
BJD12_05160	PF00749	tRNA synthetases class I (E and Q), catalytic domain
BJD12_05165	PF12275	BJD12_05165
BJD12_05170	PF00795	Carbon-nitrogen hydrolase
BJD12_05185	PF06123	BJD12_05185
BJD12_05190	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_05190	PF00672	HAMP domain
BJD12_05190	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_05195	PF00072	Response regulator receiver domain
BJD12_05195	PF00486	Transcriptional regulatory protein, C terminal
BJD12_05200	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
BJD12_05205	PF13302	Acetyltransferase (GNAT) domain
BJD12_05220	PF00270	DEAD/DEAH box helicase
BJD12_05220	PF00271	Helicase conserved C-terminal domain
BJD12_05220	PF02559	CarD-like/TRCF domain
BJD12_05220	PF03461	TRCF domain
BJD12_05225	PF13466	STAS domain
BJD12_05230	PF01584	CheW-like domain
BJD12_05230	PF01627	Hpt domain
BJD12_05230	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_05230	PF02895	Signal transducing histidine kinase, homodimeric domain
BJD12_05240	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_05245	PF01584	CheW-like domain
BJD12_05250	PF00072	Response regulator receiver domain
BJD12_05250	PF00563	EAL domain
BJD12_05255	PF01739	CheR methyltransferase, SAM binding domain
BJD12_05255	PF03705	CheR methyltransferase, all-alpha domain
BJD12_05260	PF00072	Response regulator receiver domain
BJD12_05260	PF01339	CheB methylesterase
BJD12_05270	PF13091	PLD-like domain
BJD12_05275	PF01431	Peptidase family M13
BJD12_05275	PF05649	Peptidase family M13
BJD12_05285	PF00300	Histidine phosphatase superfamily (branch 1)
BJD12_05290	PF04493	Endonuclease V
BJD12_05305	PF02678	Pirin
BJD12_05305	PF05726	Pirin C-terminal cupin domain
BJD12_05320	PF02678	Pirin
BJD12_05320	PF05726	Pirin C-terminal cupin domain
BJD12_05325	PF02554	BJD12_05325
BJD12_05325	PF13722	BJD12_05325
BJD12_05330	PF04328	BJD12_05330
BJD12_05340	PF13419	Haloacid dehalogenase-like hydrolase
BJD12_05345	PF12796	Ankyrin repeats (3 copies)
BJD12_05350	PF11187	Protein of unknown function (DUF2974)
BJD12_05355	PF05684	BJD12_05355
BJD12_05365	PF12804	MobA-like NTP transferase domain
BJD12_05370	PF02625	XdhC and CoxI family
BJD12_05370	PF13478	XdhC Rossmann domain
BJD12_05375	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BJD12_05375	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
BJD12_05385	PF00111	2Fe-2S iron-sulfur cluster binding domain
BJD12_05385	PF01799	[2Fe-2S] binding domain
BJD12_05390	PF00107	Zinc-binding dehydrogenase
BJD12_05390	PF08240	Alcohol dehydrogenase GroES-like domain
BJD12_05400	PF00436	Single-strand binding protein family
BJD12_05405	PF00348	Polyprenyl synthetase
BJD12_05410	PF01738	Dienelactone hydrolase family
BJD12_05415	PF02875	Mur ligase family, glutamate ligase domain
BJD12_05415	PF08245	Mur ligase middle domain
BJD12_05430	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
BJD12_05430	PF00696	Amino acid kinase family
BJD12_05430	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
BJD12_05435	PF02567	Phenazine biosynthesis-like protein
BJD12_05440	PF02567	Phenazine biosynthesis-like protein
BJD12_05445	PF05433	BJD12_05445
BJD12_05450	PF02566	OsmC-like protein
BJD12_05455	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
BJD12_05455	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
BJD12_05460	PF03652	Uncharacterised protein family (UPF0081)
BJD12_05465	PF02622	Uncharacterized ACR, COG1678
BJD12_05470	PF13687	BJD12_05470
BJD12_05475	PF03352	Methyladenine glycosylase
BJD12_05485	PF01904	Protein of unknown function DUF72
BJD12_05490	PF02588	BJD12_05490
BJD12_05495	PF00437	Type II/IV secretion system protein
BJD12_05500	PF00437	Type II/IV secretion system protein
BJD12_05505	PF01168	Alanine racemase, N-terminal domain
BJD12_05510	PF03807	NADP oxidoreductase coenzyme F420-dependent
BJD12_05510	PF14748	Pyrroline-5-carboxylate reductase dimerisation
BJD12_05515	PF00216	Bacterial DNA-binding protein
BJD12_05520	PF01551	Peptidase family M23
BJD12_05525	PF12977	Domain of Unknown Function with PDB structure (DUF3861)
BJD12_05535	PF07273	Protein of unknown function (DUF1439)
BJD12_05540	PF01965	DJ-1/PfpI family
BJD12_05545	PF00856	SET domain
BJD12_05550	PF02082	Transcriptional regulator
BJD12_05555	PF01458	Uncharacterized protein family (UPF0051)
BJD12_05560	PF00005	ABC transporter
BJD12_05565	PF01458	Uncharacterized protein family (UPF0051)
BJD12_05570	PF00266	Aminotransferase class-V
BJD12_05575	PF13673	Acetyltransferase (GNAT) domain
BJD12_05580	PF00355	Rieske [2Fe-2S] domain
BJD12_05585	PF00593	TonB dependent receptor
BJD12_05585	PF07715	TonB-dependent Receptor Plug Domain
BJD12_05590	PF13640	2OG-Fe(II) oxygenase superfamily
BJD12_05595	PF08238	Sel1 repeat
BJD12_05600	PF16357	BJD12_05600
BJD12_05605	PF10029	BJD12_05605
BJD12_05610	PF10670	BJD12_05610
BJD12_05620	PF02424	ApbE family
BJD12_05625	PF00175	Oxidoreductase NAD-binding domain
BJD12_05625	PF00258	Flavodoxin
BJD12_05630	PF05962	HutD
BJD12_05635	PF12836	Helix-hairpin-helix motif
BJD12_05640	PF01546	Peptidase family M20/M25/M40
BJD12_05640	PF07687	Peptidase dimerisation domain
BJD12_05645	PF04226	BJD12_05645
BJD12_05650	PF01636	Phosphotransferase enzyme family
BJD12_05655	PF00483	Nucleotidyl transferase
BJD12_05660	PF00308	Bacterial dnaA  protein
BJD12_05665	PF01594	BJD12_05665
BJD12_05670	PF09839	BJD12_05670
BJD12_05675	PF00586	AIR synthase related protein, N-terminal domain
BJD12_05675	PF02769	AIR synthase related protein, C-terminal domain
BJD12_05685	PF09997	BJD12_05685
BJD12_05690	PF00551	Formyl transferase
BJD12_05695	PF11306	Protein of unknown function (DUF3108)
BJD12_05700	PF11306	Protein of unknown function (DUF3108)
BJD12_05720	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
BJD12_05725	PF01722	BolA-like protein
BJD12_05730	PF00571	CBS domain
BJD12_05730	PF01380	SIS domain
BJD12_05735	PF08282	haloacid dehalogenase-like hydrolase
BJD12_05740	PF06835	Lipopolysaccharide-assembly, LptC-related
BJD12_05745	PF03968	OstA-like protein
BJD12_05750	PF00005	ABC transporter
BJD12_05750	PF12399	Branched-chain amino acid ATP-binding cassette transporter
BJD12_05755	PF00309	BJD12_05755
BJD12_05755	PF04552	Sigma-54, DNA binding domain
BJD12_05755	PF04963	Sigma-54 factor, core binding domain
BJD12_05760	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
BJD12_05765	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BJD12_05770	PF02603	HPr Serine kinase N terminus
BJD12_05770	PF07475	HPr Serine kinase C-terminal domain
BJD12_05775	PF03668	BJD12_05775
BJD12_05780	PF03610	PTS system fructose IIA component
BJD12_05785	PF00381	PTS HPr component phosphorylation site
BJD12_05790	PF00391	PEP-utilising enzyme, mobile domain
BJD12_05790	PF02896	PEP-utilising enzyme, TIM barrel domain
BJD12_05790	PF05524	PEP-utilising enzyme, N-terminal
BJD12_05795	PF00571	CBS domain
BJD12_05795	PF01769	Divalent cation transporter
BJD12_05795	PF03448	MgtE intracellular N domain
BJD12_05800	PF00326	Prolyl oligopeptidase family
BJD12_05805	PF02322	BJD12_05805
BJD12_05810	PF01654	BJD12_05810
BJD12_05815	PF00324	Amino acid permease
BJD12_05820	PF00544	Pectate lyase
BJD12_05830	PF00561	alpha/beta hydrolase fold
BJD12_05835	PF00196	Bacterial regulatory proteins, luxR family
BJD12_05835	PF03472	Autoinducer binding domain
BJD12_05840	PF13520	Amino acid permease
BJD12_05850	PF13365	Trypsin-like peptidase domain
BJD12_05865	PF04820	Tryptophan halogenase
BJD12_05870	PF13621	Cupin-like domain
BJD12_05875	PF07277	BJD12_05875
BJD12_05880	PF00593	TonB dependent receptor
BJD12_05880	PF07715	TonB-dependent Receptor Plug Domain
BJD12_05885	PF01433	Peptidase family M1
BJD12_05895	PF00376	MerR family regulatory protein
BJD12_05895	PF09278	MerR, DNA binding
BJD12_05900	PF07690	Major Facilitator Superfamily
BJD12_05910	PF03738	Glutathionylspermidine synthase preATP-grasp
BJD12_05915	PF06693	BJD12_05915
BJD12_05920	PF03994	BJD12_05920
BJD12_05925	PF10679	BJD12_05925
BJD12_05930	PF07885	Ion channel
BJD12_05935	PF04012	BJD12_05935
BJD12_05940	PF09938	BJD12_05940
BJD12_05945	PF00583	Acetyltransferase (GNAT) family
BJD12_05950	PF01243	Pyridoxamine 5'-phosphate oxidase
BJD12_05950	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
BJD12_05955	PF01202	Shikimate kinase
BJD12_05960	PF01761	3-dehydroquinate synthase
BJD12_05965	PF05406	WGR domain
BJD12_05970	PF01208	Uroporphyrinogen decarboxylase (URO-D)
BJD12_05975	PF07690	Major Facilitator Superfamily
BJD12_05980	PF00072	Response regulator receiver domain
BJD12_05980	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_05980	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_05980	PF07495	Y_Y_Y domain
BJD12_05985	PF00072	Response regulator receiver domain
BJD12_05985	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_05985	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_05985	PF07494	Two component regulator propeller
BJD12_05985	PF07495	Y_Y_Y domain
BJD12_05990	PF00072	Response regulator receiver domain
BJD12_05990	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_05990	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_05990	PF07494	Two component regulator propeller
BJD12_05990	PF07495	Y_Y_Y domain
BJD12_05995	PF04264	YceI-like domain
BJD12_06000	PF01292	Prokaryotic cytochrome b561
BJD12_06005	PF04264	YceI-like domain
BJD12_06010	PF00313	'Cold-shock' DNA-binding domain
BJD12_06010	PF05901	BJD12_06010
BJD12_06020	PF05768	Glutaredoxin-like domain (DUF836)
BJD12_06025	PF03313	BJD12_06025
BJD12_06025	PF03315	Serine dehydratase beta chain
BJD12_06030	PF00561	alpha/beta hydrolase fold
BJD12_06035	PF00742	Homoserine dehydrogenase
BJD12_06035	PF03447	Homoserine dehydrogenase, NAD binding domain
BJD12_06040	PF01053	Cys/Met metabolism PLP-dependent enzyme
BJD12_06045	PF00561	alpha/beta hydrolase fold
BJD12_06050	PF01551	Peptidase family M23
BJD12_06055	PF00009	Elongation factor Tu GTP binding domain
BJD12_06055	PF16658	BJD12_06055
BJD12_06060	PF03006	BJD12_06060
BJD12_06065	PF05170	BJD12_06065
BJD12_06075	PF00571	CBS domain
BJD12_06080	PF00535	Glycosyl transferase family 2
BJD12_06085	PF00912	Transglycosylase
BJD12_06090	PF01430	Hsp33 protein
BJD12_06100	PF00593	TonB dependent receptor
BJD12_06100	PF07715	TonB-dependent Receptor Plug Domain
BJD12_06105	PF00440	Bacterial regulatory proteins, tetR family
BJD12_06110	PF12146	Putative lysophospholipase
BJD12_06115	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BJD12_06115	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BJD12_06115	PF09317	BJD12_06115
BJD12_06120	PF06993	BJD12_06120
BJD12_06125	PF07690	Major Facilitator Superfamily
BJD12_06130	PF00144	Beta-lactamase
BJD12_06145	PF01597	Glycine cleavage H-protein
BJD12_06150	PF01571	Aminomethyltransferase folate-binding domain
BJD12_06150	PF08669	Glycine cleavage T-protein C-terminal barrel domain
BJD12_06155	PF01957	NfeD-like C-terminal, partner-binding
BJD12_06160	PF01145	SPFH domain / Band 7 family
BJD12_06160	PF16200	BJD12_06160
BJD12_06165	PF02694	BJD12_06165
BJD12_06170	PF03819	MazG nucleotide pyrophosphohydrolase domain
BJD12_06175	PF00459	Inositol monophosphatase family
BJD12_06180	PF00293	NUDIX domain
BJD12_06185	PF00202	Aminotransferase class-III
BJD12_06190	PF04452	RNA methyltransferase
BJD12_06195	PF02685	Glucokinase
BJD12_06200	PF00593	TonB dependent receptor
BJD12_06200	PF07715	TonB-dependent Receptor Plug Domain
BJD12_06205	PF01120	Alpha-L-fucosidase
BJD12_06205	PF16757	BJD12_06205
BJD12_06210	PF00704	Glycosyl hydrolases family 18
BJD12_06225	PF00703	Glycosyl hydrolases family 2
BJD12_06225	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
BJD12_06230	PF00933	Glycosyl hydrolase family 3 N terminal domain
BJD12_06230	PF01915	Glycosyl hydrolase family 3 C-terminal domain
BJD12_06230	PF07691	PA14 domain
BJD12_06230	PF14310	Fibronectin type III-like domain
BJD12_06235	PF06824	Protein of unknown function (DUF1237)
BJD12_06240	PF07971	Glycosyl hydrolase family 92
BJD12_06245	PF01301	Glycosyl hydrolases family 35
BJD12_06265	PF01120	Alpha-L-fucosidase
BJD12_06270	PF13088	BNR repeat-like domain
BJD12_06275	PF13855	Leucine rich repeat
BJD12_06280	PF03932	CutC family
BJD12_06285	PF01112	Asparaginase
BJD12_06290	PF00092	von Willebrand factor type A domain
BJD12_06290	PF12034	BJD12_06290
BJD12_06290	PF12450	BJD12_06290
BJD12_06295	PF04542	Sigma-70 region 2
BJD12_06295	PF04545	Sigma-70, region 4
BJD12_06305	PF13302	Acetyltransferase (GNAT) domain
BJD12_06310	PF01584	CheW-like domain
BJD12_06315	PF01339	CheB methylesterase
BJD12_06320	PF00072	Response regulator receiver domain
BJD12_06320	PF01584	CheW-like domain
BJD12_06320	PF01627	Hpt domain
BJD12_06320	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_06320	PF02895	Signal transducing histidine kinase, homodimeric domain
BJD12_06325	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_06330	PF01584	CheW-like domain
BJD12_06335	PF00072	Response regulator receiver domain
BJD12_06340	PF00072	Response regulator receiver domain
BJD12_06345	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
BJD12_06345	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
BJD12_06350	PF03544	Gram-negative bacterial TonB protein C-terminal
BJD12_06355	PF03747	ADP-ribosylglycohydrolase
BJD12_06360	PF00814	Glycoprotease family
BJD12_06365	PF13307	Helicase C-terminal domain
BJD12_06375	PF00905	Penicillin binding protein transpeptidase domain
BJD12_06375	PF00912	Transglycosylase
BJD12_06375	PF14814	Bifunctional transglycosylase second domain
BJD12_06380	PF00535	Glycosyl transferase family 2
BJD12_06380	PF13692	Glycosyl transferases group 1
BJD12_06390	PF02824	TGS domain
BJD12_06390	PF04607	Region found in RelA / SpoT proteins
BJD12_06390	PF13291	ACT domain
BJD12_06390	PF13328	HD domain
BJD12_06395	PF08042	BJD12_06395
BJD12_06400	PF12706	Beta-lactamase superfamily domain
BJD12_06405	PF03070	TENA/THI-4/PQQC family
BJD12_06410	PF05402	Coenzyme PQQ synthesis protein D (PqqD)
BJD12_06425	PF10142	PhoPQ-activated pathogenicity-related protein
BJD12_06430	PF02685	Glucokinase
BJD12_06435	PF00593	TonB dependent receptor
BJD12_06435	PF07715	TonB-dependent Receptor Plug Domain
BJD12_06440	PF00270	DEAD/DEAH box helicase
BJD12_06440	PF00271	Helicase conserved C-terminal domain
BJD12_06440	PF04408	Helicase associated domain (HA2)
BJD12_06440	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
BJD12_06440	PF11898	BJD12_06440
BJD12_06445	PF00210	Ferritin-like domain
BJD12_06450	PF00270	DEAD/DEAH box helicase
BJD12_06450	PF00271	Helicase conserved C-terminal domain
BJD12_06450	PF00570	HRDC domain
BJD12_06450	PF09382	RQC domain
BJD12_06450	PF16124	BJD12_06450
BJD12_06460	PF00072	Response regulator receiver domain
BJD12_06470	PF01479	S4 domain
BJD12_06480	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_06480	PF00672	HAMP domain
BJD12_06480	PF12729	BJD12_06480
BJD12_06485	PF00072	Response regulator receiver domain
BJD12_06505	PF06508	Queuosine biosynthesis protein QueC
BJD12_06510	PF04055	Radical SAM superfamily
BJD12_06510	PF13394	4Fe-4S single cluster domain
BJD12_06515	PF13525	Outer membrane lipoprotein
BJD12_06515	PF16331	BJD12_06515
BJD12_06520	PF00691	OmpA family
BJD12_06525	PF04052	TolB amino-terminal domain
BJD12_06525	PF07676	WD40-like Beta Propeller Repeat
BJD12_06530	PF13103	TonB C terminal
BJD12_06535	PF02472	Biopolymer transport protein ExbD/TolR
BJD12_06540	PF01618	BJD12_06540
BJD12_06545	PF03061	Thioesterase superfamily
BJD12_06550	PF05491	Holliday junction DNA helicase ruvB C-terminus
BJD12_06550	PF05496	Holliday junction DNA helicase ruvB N-terminus
BJD12_06555	PF09346	SMI1 / KNR4 family (SUKH-1)
BJD12_06560	PF02705	BJD12_06560
BJD12_06565	PF01330	RuvA N terminal domain
BJD12_06565	PF07499	RuvA, C-terminal domain
BJD12_06565	PF14520	Helix-hairpin-helix domain
BJD12_06570	PF02075	Crossover junction endodeoxyribonuclease RuvC
BJD12_06575	PF01709	Transcriptional regulator
BJD12_06580	PF12697	Alpha/beta hydrolase family
BJD12_06585	PF13673	Acetyltransferase (GNAT) domain
BJD12_06590	PF00152	tRNA synthetases class II (D, K and N)
BJD12_06590	PF01336	OB-fold nucleic acid binding domain
BJD12_06590	PF02938	GAD domain
BJD12_06595	PF11218	BJD12_06595
BJD12_06600	PF09723	BJD12_06600
BJD12_06610	PF07690	Major Facilitator Superfamily
BJD12_06615	PF04143	BJD12_06615
BJD12_06625	PF00753	Metallo-beta-lactamase superfamily
BJD12_06630	PF01022	Bacterial regulatory protein, arsR family
BJD12_06635	PF01925	BJD12_06635
BJD12_06640	PF04273	Putative phosphatase (DUF442)
BJD12_06645	PF00593	TonB dependent receptor
BJD12_06645	PF07715	TonB-dependent Receptor Plug Domain
BJD12_06650	PF04185	Phosphoesterase family
BJD12_06650	PF05506	BJD12_06650
BJD12_06655	PF07859	alpha/beta hydrolase fold
BJD12_06660	PF13354	Beta-lactamase enzyme family
BJD12_06665	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_06665	PF03466	LysR substrate binding domain
BJD12_06670	PF01471	Putative peptidoglycan binding domain
BJD12_06670	PF13406	Transglycosylase SLT domain
BJD12_06675	PF14317	BJD12_06675
BJD12_06680	PF00005	ABC transporter
BJD12_06680	PF12848	ABC transporter
BJD12_06680	PF16326	BJD12_06680
BJD12_06685	PF00593	TonB dependent receptor
BJD12_06685	PF07715	TonB-dependent Receptor Plug Domain
BJD12_06690	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BJD12_06695	PF00593	TonB dependent receptor
BJD12_06695	PF07715	TonB-dependent Receptor Plug Domain
BJD12_06700	PF00593	TonB dependent receptor
BJD12_06700	PF07715	TonB-dependent Receptor Plug Domain
BJD12_06705	PF00067	Cytochrome P450
BJD12_06715	PF00999	Sodium/hydrogen exchanger family
BJD12_06715	PF02254	TrkA-N domain
BJD12_06720	PF03328	HpcH/HpaI aldolase/citrate lyase family
BJD12_06725	PF00593	TonB dependent receptor
BJD12_06725	PF07715	TonB-dependent Receptor Plug Domain
BJD12_06735	PF04183	IucA / IucC family
BJD12_06735	PF06276	Ferric iron reductase FhuF-like transporter
BJD12_06740	PF07690	Major Facilitator Superfamily
BJD12_06745	PF04183	IucA / IucC family
BJD12_06745	PF06276	Ferric iron reductase FhuF-like transporter
BJD12_06750	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
BJD12_06750	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
BJD12_06760	PF02654	BJD12_06760
BJD12_06765	PF00300	Histidine phosphatase superfamily (branch 1)
BJD12_06770	PF02277	Phosphoribosyltransferase
BJD12_06775	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
BJD12_06780	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
BJD12_06780	PF07685	CobB/CobQ-like glutamine amidotransferase domain
BJD12_06785	PF00155	Aminotransferase class I and II
BJD12_06790	PF03186	BJD12_06790
BJD12_06795	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
BJD12_06795	PF12557	Cob(I)alamin adenosyltransferase N terminal
BJD12_06810	PF00593	TonB dependent receptor
BJD12_06810	PF07715	TonB-dependent Receptor Plug Domain
BJD12_06815	PF01053	Cys/Met metabolism PLP-dependent enzyme
BJD12_06820	PF00004	ATPase family associated with various cellular activities (AAA)
BJD12_06820	PF02861	Clp amino terminal domain
BJD12_06820	PF07724	AAA domain (Cdc48 subfamily)
BJD12_06820	PF10431	C-terminal, D2-small domain, of ClpB protein
BJD12_06825	PF01541	GIY-YIG catalytic domain
BJD12_06830	PF14497	Glutathione S-transferase, C-terminal domain
BJD12_06835	PF11219	BJD12_06835
BJD12_06840	PF07007	Protein of unknown function (DUF1311)
BJD12_06855	PF12098	BJD12_06855
BJD12_06860	PF00593	TonB dependent receptor
BJD12_06860	PF07715	TonB-dependent Receptor Plug Domain
BJD12_06865	PF02358	Trehalose-phosphatase
BJD12_06870	PF00723	Glycosyl hydrolases family 15
BJD12_06875	PF00982	Glycosyltransferase family 20
BJD12_06880	PF01011	PQQ enzyme repeat
BJD12_06880	PF13360	PQQ-like domain
BJD12_06885	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_06895	PF13761	BJD12_06895
BJD12_06900	PF02578	Multi-copper polyphenol oxidoreductase laccase
BJD12_06905	PF00849	RNA pseudouridylate synthase
BJD12_06910	PF13525	Outer membrane lipoprotein
BJD12_06920	PF00795	Carbon-nitrogen hydrolase
BJD12_06920	PF02540	NAD synthase
BJD12_06935	PF00549	CoA-ligase
BJD12_06935	PF08442	ATP-grasp domain
BJD12_06940	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_06940	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_06945	PF00072	Response regulator receiver domain
BJD12_06945	PF00158	Sigma-54 interaction domain
BJD12_06945	PF02954	Bacterial regulatory protein, Fis family
BJD12_06950	PF00437	Type II/IV secretion system protein
BJD12_06950	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
BJD12_06955	PF00114	Pilin (bacterial filament)
BJD12_06955	PF07963	Prokaryotic N-terminal methylation motif
BJD12_06960	PF00114	Pilin (bacterial filament)
BJD12_06960	PF07963	Prokaryotic N-terminal methylation motif
BJD12_06965	PF00482	Type II secretion system (T2SS), protein F
BJD12_06970	PF01478	Type IV leader peptidase family
BJD12_06970	PF06750	BJD12_06970
BJD12_06975	PF01121	Dephospho-CoA kinase
BJD12_06980	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_06980	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_06985	PF00072	Response regulator receiver domain
BJD12_06985	PF00486	Transcriptional regulatory protein, C terminal
BJD12_06995	PF08443	RimK-like ATP-grasp domain
BJD12_07000	PF00128	Alpha amylase, catalytic domain
BJD12_07000	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
BJD12_07005	PF00816	H-NS histone family
BJD12_07055	PF01844	HNH endonuclease
BJD12_07065	PF13391	BJD12_07065
BJD12_07075	PF14412	BJD12_07075
BJD12_07080	PF07791	BJD12_07080
BJD12_07090	PF01935	Domain of unknown function DUF87
BJD12_07095	PF02086	D12 class N6 adenine-specific DNA methyltransferase
BJD12_07125	PF00589	Phage integrase family
BJD12_07130	PF00069	Protein kinase domain
BJD12_07145	PF01381	Helix-turn-helix
BJD12_07170	PF00589	Phage integrase family
BJD12_07180	PF00657	GDSL-like Lipase/Acylhydrolase
BJD12_07180	PF03797	Autotransporter beta-domain
BJD12_07185	PF02597	ThiS family
BJD12_07190	PF05690	Thiazole biosynthesis protein ThiG
BJD12_07195	PF02390	Putative methyltransferase
BJD12_07200	PF02080	TrkA-C domain
BJD12_07200	PF03600	Citrate transporter
BJD12_07205	PF00355	Rieske [2Fe-2S] domain
BJD12_07215	PF01557	Fumarylacetoacetate (FAA) hydrolase family
BJD12_07220	PF01741	Large-conductance mechanosensitive channel, MscL
BJD12_07225	PF04389	Peptidase family M28
BJD12_07230	PF00356	Bacterial regulatory proteins, lacI family
BJD12_07230	PF13377	Periplasmic binding protein-like domain
BJD12_07235	PF00067	Cytochrome P450
BJD12_07240	PF01341	Glycosyl hydrolases family 6
BJD12_07245	PF00593	TonB dependent receptor
BJD12_07245	PF07715	TonB-dependent Receptor Plug Domain
BJD12_07250	PF00703	Glycosyl hydrolases family 2
BJD12_07250	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
BJD12_07250	PF02837	Glycosyl hydrolases family 2, sugar binding domain
BJD12_07250	PF13385	Concanavalin A-like lectin/glucanases superfamily
BJD12_07255	PF10566	Glycoside hydrolase 97
BJD12_07255	PF14508	Glycosyl-hydrolase 97 N-terminal
BJD12_07255	PF14509	Glycosyl-hydrolase 97 C-terminal, oligomerisation
BJD12_07260	PF00135	Carboxylesterase family
BJD12_07265	PF00588	SpoU rRNA Methylase family
BJD12_07265	PF08032	RNA 2'-O ribose methyltransferase substrate binding
BJD12_07270	PF01235	BJD12_07270
BJD12_07280	PF01433	Peptidase family M1
BJD12_07280	PF11838	ERAP1-like C-terminal domain
BJD12_07285	PF00873	AcrB/AcrD/AcrF family
BJD12_07290	PF16576	BJD12_07290
BJD12_07295	PF00009	Elongation factor Tu GTP binding domain
BJD12_07295	PF01583	Adenylylsulphate kinase
BJD12_07300	PF01507	Phosphoadenosine phosphosulfate reductase family
BJD12_07305	PF00175	Oxidoreductase NAD-binding domain
BJD12_07305	PF00258	Flavodoxin
BJD12_07305	PF00667	FAD binding domain
BJD12_07310	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
BJD12_07310	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
BJD12_07315	PF01507	Phosphoadenosine phosphosulfate reductase family
BJD12_07320	PF03929	BJD12_07320
BJD12_07325	PF00593	TonB dependent receptor
BJD12_07325	PF07715	TonB-dependent Receptor Plug Domain
BJD12_07335	PF01590	GAF domain
BJD12_07335	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_07345	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_07345	PF03466	LysR substrate binding domain
BJD12_07350	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BJD12_07350	PF13241	Putative NAD(P)-binding
BJD12_07355	PF00291	Pyridoxal-phosphate dependent enzyme
BJD12_07360	PF04191	Phospholipid methyltransferase
BJD12_07365	PF01661	Macro domain
BJD12_07370	PF00274	Fructose-bisphosphate aldolase class-I
BJD12_07380	PF00224	Pyruvate kinase, barrel domain
BJD12_07380	PF02887	Pyruvate kinase, alpha/beta domain
BJD12_07385	PF13419	Haloacid dehalogenase-like hydrolase
BJD12_07390	PF00162	Phosphoglycerate kinase
BJD12_07395	PF13163	BJD12_07395
BJD12_07400	PF10101	BJD12_07400
BJD12_07410	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BJD12_07410	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
BJD12_07415	PF08332	Calcium/calmodulin dependent protein kinase II Association
BJD12_07420	PF03922	OmpW family
BJD12_07430	PF03922	OmpW family
BJD12_07435	PF02265	S1/P1 Nuclease
BJD12_07440	PF00753	Metallo-beta-lactamase superfamily
BJD12_07445	PF13531	Bacterial extracellular solute-binding protein
BJD12_07450	PF00528	Binding-protein-dependent transport system inner membrane component
BJD12_07455	PF00005	ABC transporter
BJD12_07465	PF03544	Gram-negative bacterial TonB protein C-terminal
BJD12_07465	PF05569	BlaR1 peptidase M56
BJD12_07470	PF03965	Penicillinase repressor
BJD12_07475	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
BJD12_07480	PF16670	BJD12_07480
BJD12_07485	PF00593	TonB dependent receptor
BJD12_07485	PF07715	TonB-dependent Receptor Plug Domain
BJD12_07490	PF01471	Putative peptidoglycan binding domain
BJD12_07490	PF03734	L,D-transpeptidase catalytic domain
BJD12_07495	PF01551	Peptidase family M23
BJD12_07505	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_07510	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_07510	PF03466	LysR substrate binding domain
BJD12_07515	PF00593	TonB dependent receptor
BJD12_07515	PF07715	TonB-dependent Receptor Plug Domain
BJD12_07520	PF00456	Transketolase, thiamine diphosphate binding domain
BJD12_07520	PF02779	Transketolase, pyrimidine binding domain
BJD12_07520	PF02780	Transketolase, C-terminal domain
BJD12_07525	PF00375	Sodium:dicarboxylate symporter family
BJD12_07530	PF13584	BJD12_07530
BJD12_07535	PF00515	Tetratricopeptide repeat
BJD12_07535	PF13519	von Willebrand factor type A domain
BJD12_07540	PF00092	von Willebrand factor type A domain
BJD12_07545	PF14316	BJD12_07545
BJD12_07550	PF01882	BJD12_07550
BJD12_07555	PF07726	ATPase family associated with various cellular activities (AAA)
BJD12_07560	PF00263	BJD12_07560
BJD12_07560	PF03958	Bacterial type II/III secretion system short domain
BJD12_07560	PF07660	Secretin and TonB N terminus short domain
BJD12_07565	PF04351	Pilus assembly protein, PilP
BJD12_07570	PF04350	Pilus assembly protein, PilO
BJD12_07575	PF05137	BJD12_07575
BJD12_07580	PF11104	Type IV pilus assembly protein PilM;
BJD12_07585	PF00905	Penicillin binding protein transpeptidase domain
BJD12_07585	PF00912	Transglycosylase
BJD12_07585	PF17092	BJD12_07585
BJD12_07600	PF00285	Citrate synthase
BJD12_07605	PF01197	Ribosomal protein L31
BJD12_07610	PF01156	Inosine-uridine preferring nucleoside hydrolase
BJD12_07615	PF00270	DEAD/DEAH box helicase
BJD12_07615	PF00271	Helicase conserved C-terminal domain
BJD12_07615	PF17191	BJD12_07615
BJD12_07620	PF01042	Endoribonuclease L-PSP
BJD12_07625	PF06809	BJD12_07625
BJD12_07630	PF04295	BJD12_07630
BJD12_07630	PF08666	SAF domain
BJD12_07635	PF03573	outer membrane porin, OprD family
BJD12_07640	PF13378	Enolase C-terminal domain-like
BJD12_07645	PF07690	Major Facilitator Superfamily
BJD12_07650	PF00171	Aldehyde dehydrogenase family
BJD12_07655	PF00701	Dihydrodipicolinate synthetase family
BJD12_07660	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_07660	PF03466	LysR substrate binding domain
BJD12_07670	PF02824	TGS domain
BJD12_07670	PF04607	Region found in RelA / SpoT proteins
BJD12_07670	PF13291	ACT domain
BJD12_07670	PF13328	HD domain
BJD12_07675	PF13419	Haloacid dehalogenase-like hydrolase
BJD12_07680	PF04198	Putative sugar-binding domain
BJD12_07685	PF01547	Bacterial extracellular solute-binding protein
BJD12_07690	PF04966	Carbohydrate-selective porin, OprB family
BJD12_07695	PF00528	Binding-protein-dependent transport system inner membrane component
BJD12_07700	PF00528	Binding-protein-dependent transport system inner membrane component
BJD12_07705	PF00005	ABC transporter
BJD12_07705	PF08402	TOBE domain
BJD12_07710	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_07720	PF01192	RNA polymerase Rpb6
BJD12_07725	PF00625	Guanylate kinase
BJD12_07730	PF03755	BJD12_07730
BJD12_07730	PF08340	BJD12_07730
BJD12_07735	PF01138	3' exoribonuclease family, domain 1
BJD12_07735	PF03725	3' exoribonuclease family, domain 2
BJD12_07740	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BJD12_07745	PF01725	Ham1 family
BJD12_07750	PF04055	Radical SAM superfamily
BJD12_07750	PF06969	HemN C-terminal domain
BJD12_07755	PF07793	BJD12_07755
BJD12_07760	PF07238	PilZ domain
BJD12_07765	PF00557	Metallopeptidase family M24
BJD12_07780	PF00557	Metallopeptidase family M24
BJD12_07780	PF05195	Aminopeptidase P, N-terminal domain
BJD12_07785	PF03695	Uncharacterised protein family (UPF0149)
BJD12_07795	PF05164	Cell division protein ZapA
BJD12_07805	PF01812	5-formyltetrahydrofolate cyclo-ligase family
BJD12_07810	PF01878	EVE domain
BJD12_07815	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
BJD12_07820	PF02643	Uncharacterized ACR, COG1430
BJD12_07825	PF13369	BJD12_07825
BJD12_07825	PF13371	Tetratricopeptide repeat
BJD12_07830	PF00301	Rubredoxin
BJD12_07835	PF02581	Thiamine monophosphate synthase/TENI
BJD12_07855	PF01464	Transglycosylase SLT domain
BJD12_07875	PF00263	BJD12_07875
BJD12_07875	PF03958	Bacterial type II/III secretion system short domain
BJD12_07880	PF01311	BJD12_07880
BJD12_07885	PF09486	BJD12_07885
BJD12_07890	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BJD12_07890	PF02874	ATP synthase alpha/beta family, beta-barrel domain
BJD12_07895	PF02108	BJD12_07895
BJD12_07900	PF09502	BJD12_07900
BJD12_07905	PF01514	Secretory protein of YscJ/FliF family
BJD12_07910	PF09487	BJD12_07910
BJD12_07915	PF09613	BJD12_07915
BJD12_07920	PF01312	FlhB HrpN YscU SpaS Family
BJD12_07925	PF00771	FHIPEP family
BJD12_07930	PF09483	BJD12_07930
BJD12_07935	PF01052	Surface presentation of antigens (SPOA)
BJD12_07940	PF00813	BJD12_07940
BJD12_07945	PF01313	BJD12_07945
BJD12_07970	PF05932	Tir chaperone protein (CesT) family
BJD12_07975	PF03211	Pectate lyase
BJD12_08015	PF12760	Transposase zinc-ribbon domain
BJD12_08030	PF01527	Transposase
BJD12_08035	PF00665	Integrase core domain
BJD12_08035	PF13276	BJD12_08035
BJD12_08040	PF05819	BJD12_08040
BJD12_08070	PF00202	Aminotransferase class-III
BJD12_08075	PF00196	Bacterial regulatory proteins, luxR family
BJD12_08075	PF13424	Tetratricopeptide repeat
BJD12_08080	PF00127	Copper binding proteins, plastocyanin/azurin family
BJD12_08085	PF00155	Aminotransferase class I and II
BJD12_08090	PF01042	Endoribonuclease L-PSP
BJD12_08095	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
BJD12_08100	PF01593	Flavin containing amine oxidoreductase
BJD12_08105	PF00593	TonB dependent receptor
BJD12_08105	PF07715	TonB-dependent Receptor Plug Domain
BJD12_08110	PF13419	Haloacid dehalogenase-like hydrolase
BJD12_08120	PF00202	Aminotransferase class-III
BJD12_08125	PF00520	Ion transport protein
BJD12_08135	PF12889	Protein of unknown function (DUF3829)
BJD12_08140	PF12889	Protein of unknown function (DUF3829)
BJD12_08145	PF00106	short chain dehydrogenase
BJD12_08155	PF01569	PAP2 superfamily
BJD12_08155	PF09335	BJD12_08155
BJD12_08155	PF14067	BJD12_08155
BJD12_08160	PF01062	BJD12_08160
BJD12_08165	PF02190	ATP-dependent protease La (LON) domain
BJD12_08170	PF01225	Mur ligase family, catalytic domain
BJD12_08170	PF02875	Mur ligase family, glutamate ligase domain
BJD12_08170	PF08245	Mur ligase middle domain
BJD12_08175	PF00406	Adenylate kinase
BJD12_08180	PF00365	Phosphofructokinase
BJD12_08195	PF03030	Inorganic H+ pyrophosphatase
BJD12_08205	PF00719	Inorganic pyrophosphatase
BJD12_08210	PF08668	HDOD domain
BJD12_08215	PF00593	TonB dependent receptor
BJD12_08215	PF07715	TonB-dependent Receptor Plug Domain
BJD12_08220	PF12833	Helix-turn-helix domain
BJD12_08225	PF00486	Transcriptional regulatory protein, C terminal
BJD12_08225	PF07676	WD40-like Beta Propeller Repeat
BJD12_08230	PF01964	ThiC family
BJD12_08230	PF13667	ThiC-associated domain
BJD12_08235	PF00326	Prolyl oligopeptidase family
BJD12_08240	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_08245	PF01019	Gamma-glutamyltranspeptidase
BJD12_08250	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
BJD12_08250	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
BJD12_08255	PF00205	Thiamine pyrophosphate enzyme, central domain
BJD12_08255	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BJD12_08255	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BJD12_08260	PF13710	ACT domain
BJD12_08265	PF00291	Pyridoxal-phosphate dependent enzyme
BJD12_08270	PF00682	HMGL-like
BJD12_08270	PF08502	LeuA allosteric (dimerisation) domain
BJD12_08280	PF00180	Isocitrate/isopropylmalate dehydrogenase
BJD12_08285	PF08241	Methyltransferase domain
BJD12_08290	PF00694	Aconitase C-terminal domain
BJD12_08295	PF00330	Aconitase family (aconitate hydratase)
BJD12_08300	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_08300	PF03466	LysR substrate binding domain
BJD12_08305	PF00990	GGDEF domain
BJD12_08305	PF07494	Two component regulator propeller
BJD12_08305	PF07495	Y_Y_Y domain
BJD12_08310	PF00440	Bacterial regulatory proteins, tetR family
BJD12_08310	PF14246	AefR-like transcriptional repressor, C-terminal region
BJD12_08315	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
BJD12_08320	PF02321	Outer membrane efflux protein
BJD12_08325	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
BJD12_08330	PF03279	BJD12_08330
BJD12_08335	PF04932	BJD12_08335
BJD12_08340	PF00534	Glycosyl transferases group 1
BJD12_08340	PF13439	Glycosyltransferase Family 4
BJD12_08345	PF10276	Zinc-finger domain
BJD12_08350	PF07971	Glycosyl hydrolase family 92
BJD12_08355	PF00390	Malic enzyme, N-terminal domain
BJD12_08355	PF01515	Phosphate acetyl/butaryl transferase
BJD12_08355	PF03949	Malic enzyme, NAD binding domain
BJD12_08360	PF00375	Sodium:dicarboxylate symporter family
BJD12_08365	PF07396	Phosphate-selective porin O and P
BJD12_08370	PF00072	Response regulator receiver domain
BJD12_08370	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_08370	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_08370	PF02743	Cache domain
BJD12_08370	PF12860	BJD12_08370
BJD12_08375	PF07313	Protein of unknown function (DUF1460)
BJD12_08380	PF00593	TonB dependent receptor
BJD12_08380	PF07715	TonB-dependent Receptor Plug Domain
BJD12_08385	PF00248	Aldo/keto reductase family
BJD12_08390	PF12680	SnoaL-like domain
BJD12_08395	PF11512	Agrobacterium tumefaciens protein Atu4866
BJD12_08400	PF00072	Response regulator receiver domain
BJD12_08400	PF00196	Bacterial regulatory proteins, luxR family
BJD12_08405	PF13531	Bacterial extracellular solute-binding protein
BJD12_08410	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_08410	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_08410	PF08521	BJD12_08410
BJD12_08415	PF00072	Response regulator receiver domain
BJD12_08415	PF00486	Transcriptional regulatory protein, C terminal
BJD12_08420	PF07396	Phosphate-selective porin O and P
BJD12_08425	PF03600	Citrate transporter
BJD12_08430	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_08435	PF00356	Bacterial regulatory proteins, lacI family
BJD12_08435	PF13377	Periplasmic binding protein-like domain
BJD12_08440	PF07690	Major Facilitator Superfamily
BJD12_08445	PF00593	TonB dependent receptor
BJD12_08445	PF07715	TonB-dependent Receptor Plug Domain
BJD12_08450	PF00128	Alpha amylase, catalytic domain
BJD12_08455	PF01965	DJ-1/PfpI family
BJD12_08460	PF08014	BJD12_08460
BJD12_08465	PF03193	Protein of unknown function, DUF258
BJD12_08470	PF00155	Aminotransferase class I and II
BJD12_08475	PF13472	GDSL-like Lipase/Acylhydrolase family
BJD12_08480	PF08242	Methyltransferase domain
BJD12_08485	PF01522	Polysaccharide deacetylase
BJD12_08490	PF00462	Glutaredoxin
BJD12_08490	PF00581	Rhodanese-like domain
BJD12_08500	PF06041	Bacterial protein of unknown function (DUF924)
BJD12_08505	PF01979	Amidohydrolase family
BJD12_08510	PF07969	Amidohydrolase family
BJD12_08520	PF10990	BJD12_08520
BJD12_08540	PF09284	Rhamnogalacturonase B, N-terminal
BJD12_08540	PF14683	Polysaccharide lyase family 4, domain III
BJD12_08540	PF14686	Polysaccharide lyase family 4, domain II
BJD12_08545	PF01670	Glycosyl hydrolase family 12
BJD12_08550	PF02645	Uncharacterised protein, DegV family COG1307
BJD12_08560	PF00756	Putative esterase
BJD12_08565	PF04828	Glutathione-dependent formaldehyde-activating enzyme
BJD12_08570	PF00107	Zinc-binding dehydrogenase
BJD12_08570	PF08240	Alcohol dehydrogenase GroES-like domain
BJD12_08575	PF02583	Metal-sensitive transcriptional repressor
BJD12_08580	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_08580	PF03466	LysR substrate binding domain
BJD12_08585	PF03595	Voltage-dependent anion channel
BJD12_08590	PF13692	Glycosyl transferases group 1
BJD12_08595	PF00072	Response regulator receiver domain
BJD12_08595	PF00486	Transcriptional regulatory protein, C terminal
BJD12_08600	PF00672	HAMP domain
BJD12_08600	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_08610	PF04107	Glutamate-cysteine ligase family 2(GCS2)
BJD12_08625	PF00753	Metallo-beta-lactamase superfamily
BJD12_08630	PF01926	50S ribosome-binding GTPase
BJD12_08635	PF00034	Cytochrome c
BJD12_08640	PF13462	Thioredoxin
BJD12_08645	PF01323	DSBA-like thioredoxin domain
BJD12_08650	PF03372	Endonuclease/Exonuclease/phosphatase family
BJD12_08655	PF02028	BCCT family transporter
BJD12_08660	PF00171	Aldehyde dehydrogenase family
BJD12_08665	PF00732	GMC oxidoreductase
BJD12_08665	PF05199	GMC oxidoreductase
BJD12_08675	PF01047	MarR family
BJD12_08680	PF01494	FAD binding domain
BJD12_08685	PF00593	TonB dependent receptor
BJD12_08685	PF07715	TonB-dependent Receptor Plug Domain
BJD12_08690	PF01464	Transglycosylase SLT domain
BJD12_08690	PF14718	Soluble lytic murein transglycosylase L domain
BJD12_08695	PF00544	Pectate lyase
BJD12_08705	PF00583	Acetyltransferase (GNAT) family
BJD12_08715	PF01066	CDP-alcohol phosphatidyltransferase
BJD12_08720	PF13511	BJD12_08720
BJD12_08725	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BJD12_08725	PF03129	Anticodon binding domain
BJD12_08725	PF04073	Aminoacyl-tRNA editing domain
BJD12_08730	PF00816	H-NS histone family
BJD12_08735	PF06738	BJD12_08735
BJD12_08735	PF12821	BJD12_08735
BJD12_08740	PF02405	BJD12_08740
BJD12_08745	PF00005	ABC transporter
BJD12_08750	PF02470	BJD12_08750
BJD12_08755	PF03886	Protein of unknown function (DUF330)
BJD12_08770	PF13532	2OG-Fe(II) oxygenase superfamily
BJD12_08775	PF01946	Thi4 family
BJD12_08775	PF05187	Electron transfer flavoprotein-ubiquinone oxidoreductase
BJD12_08780	PF05045	BJD12_08780
BJD12_08780	PF14307	BJD12_08780
BJD12_08785	PF01144	Coenzyme A transferase
BJD12_08790	PF01144	Coenzyme A transferase
BJD12_08795	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
BJD12_08795	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
BJD12_08795	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
BJD12_08795	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
BJD12_08800	PF00483	Nucleotidyl transferase
BJD12_08800	PF01050	Mannose-6-phosphate isomerase
BJD12_08805	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
BJD12_08805	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
BJD12_08805	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
BJD12_08810	PF04321	RmlD substrate binding domain
BJD12_08815	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
BJD12_08820	PF00483	Nucleotidyl transferase
BJD12_08825	PF16363	BJD12_08825
BJD12_08830	PF01012	Electron transfer flavoprotein domain
BJD12_08835	PF00766	Electron transfer flavoprotein FAD-binding domain
BJD12_08835	PF01012	Electron transfer flavoprotein domain
BJD12_08840	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
BJD12_08845	PF00535	Glycosyl transferase family 2
BJD12_08850	PF00132	Bacterial transferase hexapeptide (six repeats)
BJD12_08850	PF05523	WxcM-like, C-terminal
BJD12_08855	PF04138	BJD12_08855
BJD12_08865	PF01370	NAD dependent epimerase/dehydratase family
BJD12_08870	PF16363	BJD12_08870
BJD12_08880	PF13692	Glycosyl transferases group 1
BJD12_08885	PF00534	Glycosyl transferases group 1
BJD12_08890	PF13847	Methyltransferase domain
BJD12_08900	PF01061	BJD12_08900
BJD12_08905	PF00534	Glycosyl transferases group 1
BJD12_08910	PF01053	Cys/Met metabolism PLP-dependent enzyme
BJD12_08915	PF00291	Pyridoxal-phosphate dependent enzyme
BJD12_08915	PF00571	CBS domain
BJD12_08920	PF04325	Protein of unknown function (DUF465)
BJD12_08930	PF14346	Domain of unknown function (DUF4398)
BJD12_08935	PF00437	Type II/IV secretion system protein
BJD12_08940	PF13417	Glutathione S-transferase, N-terminal domain
BJD12_08945	PF01557	Fumarylacetoacetate (FAA) hydrolase family
BJD12_08955	PF00270	DEAD/DEAH box helicase
BJD12_08955	PF00271	Helicase conserved C-terminal domain
BJD12_08960	PF01242	6-pyruvoyl tetrahydropterin synthase
BJD12_08965	PF09361	BJD12_08965
BJD12_08970	PF13500	AAA domain
BJD12_08975	PF13185	GAF domain
BJD12_08980	PF04994	TfoX C-terminal domain
BJD12_08990	PF13419	Haloacid dehalogenase-like hydrolase
BJD12_09000	PF00817	impB/mucB/samB family
BJD12_09000	PF11799	impB/mucB/samB family C-terminal domain
BJD12_09005	PF07977	FabA-like domain
BJD12_09015	PF06347	Bacterial SH3 domain
BJD12_09020	PF00665	Integrase core domain
BJD12_09020	PF13011	BJD12_09020
BJD12_09025	PF01432	Peptidase family M3
BJD12_09030	PF00291	Pyridoxal-phosphate dependent enzyme
BJD12_09040	PF00394	Multicopper oxidase
BJD12_09040	PF07731	Multicopper oxidase
BJD12_09040	PF07732	Multicopper oxidase
BJD12_09045	PF05275	BJD12_09045
BJD12_09050	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BJD12_09060	PF01471	Putative peptidoglycan binding domain
BJD12_09075	PF01380	SIS domain
BJD12_09075	PF13522	Glutamine amidotransferase domain
BJD12_09080	PF16576	BJD12_09080
BJD12_09085	PF00005	ABC transporter
BJD12_09090	PF02687	BJD12_09090
BJD12_09090	PF12704	MacB-like periplasmic core domain
BJD12_09095	PF02687	BJD12_09095
BJD12_09095	PF12704	MacB-like periplasmic core domain
BJD12_09105	PF00072	Response regulator receiver domain
BJD12_09105	PF00158	Sigma-54 interaction domain
BJD12_09105	PF02954	Bacterial regulatory protein, Fis family
BJD12_09110	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_09115	PF13229	Right handed beta helix region
BJD12_09120	PF00132	Bacterial transferase hexapeptide (six repeats)
BJD12_09120	PF12804	MobA-like NTP transferase domain
BJD12_09120	PF14602	Hexapeptide repeat of succinyl-transferase
BJD12_09125	PF04138	BJD12_09125
BJD12_09130	PF01817	Chorismate mutase type II
BJD12_09135	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
BJD12_09135	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
BJD12_09140	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BJD12_09140	PF02874	ATP synthase alpha/beta family, beta-barrel domain
BJD12_09145	PF00231	ATP synthase
BJD12_09150	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BJD12_09150	PF00306	ATP synthase alpha/beta chain, C terminal domain
BJD12_09150	PF02874	ATP synthase alpha/beta family, beta-barrel domain
BJD12_09155	PF00213	ATP synthase delta (OSCP) subunit
BJD12_09160	PF00430	ATP synthase B/B' CF(0)
BJD12_09165	PF00137	ATP synthase subunit C
BJD12_09170	PF00119	ATP synthase A chain
BJD12_09185	PF00364	Biotin-requiring enzyme
BJD12_09185	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BJD12_09185	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BJD12_09195	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BJD12_09195	PF00364	Biotin-requiring enzyme
BJD12_09195	PF02817	e3 binding domain
BJD12_09200	PF11101	BJD12_09200
BJD12_09205	PF03167	Uracil DNA glycosylase superfamily
BJD12_09210	PF03922	OmpW family
BJD12_09220	PF03180	NLPA lipoprotein
BJD12_09225	PF00528	Binding-protein-dependent transport system inner membrane component
BJD12_09230	PF00005	ABC transporter
BJD12_09230	PF09383	NIL domain
BJD12_09235	PF00892	EamA-like transporter family
BJD12_09240	PF04461	Protein of unknown function (DUF520)
BJD12_09250	PF00072	Response regulator receiver domain
BJD12_09250	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_09250	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_09255	PF12697	Alpha/beta hydrolase family
BJD12_09260	PF07209	BJD12_09260
BJD12_09265	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_09270	PF13419	Haloacid dehalogenase-like hydrolase
BJD12_09275	PF00849	RNA pseudouridylate synthase
BJD12_09280	PF05175	Methyltransferase small domain
BJD12_09290	PF07995	Glucose / Sorbosone dehydrogenase
BJD12_09295	PF11607	Protein of unknown function (DUF3247)
BJD12_09300	PF00072	Response regulator receiver domain
BJD12_09300	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_09300	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_09300	PF08448	PAS fold
BJD12_09315	PF11454	BJD12_09315
BJD12_09320	PF00842	Alanine racemase, C-terminal domain
BJD12_09320	PF01168	Alanine racemase, N-terminal domain
BJD12_09325	PF01266	FAD dependent oxidoreductase
BJD12_09330	PF01037	AsnC family
BJD12_09330	PF13404	AsnC-type helix-turn-helix domain
BJD12_09340	PF01641	SelR domain
BJD12_09345	PF09864	Membrane-bound lysozyme-inhibitor of c-type lysozyme
BJD12_09350	PF01618	BJD12_09350
BJD12_09355	PF00691	OmpA family
BJD12_09355	PF13677	BJD12_09355
BJD12_09365	PF13223	BJD12_09365
BJD12_09375	PF11730	BJD12_09375
BJD12_09380	PF01061	BJD12_09380
BJD12_09385	PF00005	ABC transporter
BJD12_09390	PF00999	Sodium/hydrogen exchanger family
BJD12_09410	PF02469	Fasciclin domain
BJD12_09415	PF03167	Uracil DNA glycosylase superfamily
BJD12_09415	PF13566	BJD12_09415
BJD12_09430	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
BJD12_09440	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_09440	PF03466	LysR substrate binding domain
BJD12_09445	PF00665	Integrase core domain
BJD12_09445	PF13011	BJD12_09445
BJD12_09450	PF03358	NADPH-dependent FMN reductase
BJD12_09460	PF00248	Aldo/keto reductase family
BJD12_09465	PF00535	Glycosyl transferase family 2
BJD12_09470	PF01431	Peptidase family M13
BJD12_09470	PF05649	Peptidase family M13
BJD12_09475	PF09995	BJD12_09475
BJD12_09490	PF13520	Amino acid permease
BJD12_09500	PF00072	Response regulator receiver domain
BJD12_09500	PF04397	LytTr DNA-binding domain
BJD12_09505	PF06580	BJD12_09505
BJD12_09510	PF01266	FAD dependent oxidoreductase
BJD12_09520	PF05974	Domain of unknown function (DUF892)
BJD12_09525	PF05067	Manganese containing catalase
BJD12_09540	PF01339	CheB methylesterase
BJD12_09540	PF01739	CheR methyltransferase, SAM binding domain
BJD12_09540	PF03705	CheR methyltransferase, all-alpha domain
BJD12_09540	PF07536	BJD12_09540
BJD12_09540	PF08447	PAS fold
BJD12_09540	PF13596	PAS domain
BJD12_09545	PF00072	Response regulator receiver domain
BJD12_09555	PF00072	Response regulator receiver domain
BJD12_09555	PF00158	Sigma-54 interaction domain
BJD12_09555	PF02954	Bacterial regulatory protein, Fis family
BJD12_09565	PF01654	BJD12_09565
BJD12_09570	PF02322	BJD12_09570
BJD12_09585	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_09590	PF13628	BJD12_09590
BJD12_09595	PF08240	Alcohol dehydrogenase GroES-like domain
BJD12_09595	PF13823	Alcohol dehydrogenase GroES-associated
BJD12_09600	PF03692	BJD12_09600
BJD12_09620	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BJD12_09620	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
BJD12_09625	PF11828	BJD12_09625
BJD12_09630	PF05650	BJD12_09630
BJD12_09635	PF00691	OmpA family
BJD12_09640	PF11445	BJD12_09640
BJD12_09650	PF13365	Trypsin-like peptidase domain
BJD12_09660	PF12040	BJD12_09660
BJD12_09665	PF12040	BJD12_09665
BJD12_09665	PF12679	BJD12_09665
BJD12_09670	PF00005	ABC transporter
BJD12_09675	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_09675	PF03466	LysR substrate binding domain
BJD12_09680	PF01042	Endoribonuclease L-PSP
BJD12_09690	PF01223	DNA/RNA non-specific endonuclease
BJD12_09700	PF07866	Protein of unknown function (DUF1653)
BJD12_09710	PF00654	Voltage gated chloride channel
BJD12_09720	PF00557	Metallopeptidase family M24
BJD12_09725	PF11903	BJD12_09725
BJD12_09730	PF01638	HxlR-like helix-turn-helix
BJD12_09735	PF04314	Protein of unknown function (DUF461)
BJD12_09740	PF02630	SCO1/SenC
BJD12_09745	PF11162	BJD12_09745
BJD12_09750	PF00857	Isochorismatase family
BJD12_09755	PF01965	DJ-1/PfpI family
BJD12_09755	PF12833	Helix-turn-helix domain
BJD12_09760	PF05368	NmrA-like family
BJD12_09805	PF00140	Sigma-70 factor, region 1
BJD12_09805	PF03979	Sigma-70 factor, region 1
BJD12_09805	PF04539	Sigma-70 region 3
BJD12_09805	PF04542	Sigma-70 region 2
BJD12_09805	PF04545	Sigma-70, region 4
BJD12_09805	PF04546	Sigma-70, non-essential region
BJD12_09810	PF02580	D-Tyr-tRNA(Tyr) deacylase
BJD12_09815	PF03279	BJD12_09815
BJD12_09820	PF13420	Acetyltransferase (GNAT) domain
BJD12_09825	PF00925	GTP cyclohydrolase II
BJD12_09830	PF03703	BJD12_09830
BJD12_09835	PF03703	BJD12_09835
BJD12_09840	PF04464	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
BJD12_09845	PF00535	Glycosyl transferase family 2
BJD12_09850	PF04932	BJD12_09850
BJD12_09855	PF13231	BJD12_09855
BJD12_09865	PF00551	Formyl transferase
BJD12_09865	PF02911	Formyl transferase, C-terminal domain
BJD12_09870	PF01327	Polypeptide deformylase
BJD12_09875	PF01476	LysM domain
BJD12_09880	PF02481	DNA recombination-mediator protein A
BJD12_09885	PF04361	BJD12_09885
BJD12_09890	PF00114	Pilin (bacterial filament)
BJD12_09890	PF14237	BJD12_09890
BJD12_09895	PF06271	BJD12_09895
BJD12_09895	PF14237	BJD12_09895
BJD12_09900	PF01131	DNA topoisomerase
BJD12_09900	PF01751	Toprim domain
BJD12_09900	PF13368	BJD12_09900
BJD12_09905	PF01300	Telomere recombination
BJD12_09920	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_09930	PF01343	Peptidase family S49
BJD12_09935	PF01554	MatE
BJD12_09940	PF12412	BJD12_09940
BJD12_09945	PF11304	BJD12_09945
BJD12_09955	PF00270	DEAD/DEAH box helicase
BJD12_09955	PF00271	Helicase conserved C-terminal domain
BJD12_09960	PF00043	Glutathione S-transferase, C-terminal domain
BJD12_09960	PF13417	Glutathione S-transferase, N-terminal domain
BJD12_09965	PF01936	NYN domain
BJD12_09965	PF12872	OST-HTH/LOTUS domain
BJD12_09975	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BJD12_09980	PF03458	BJD12_09980
BJD12_09985	PF03458	BJD12_09985
BJD12_09990	PF00140	Sigma-70 factor, region 1
BJD12_09990	PF04542	Sigma-70 region 2
BJD12_09990	PF04545	Sigma-70, region 4
BJD12_09995	PF03167	Uracil DNA glycosylase superfamily
BJD12_10000	PF00072	Response regulator receiver domain
BJD12_10010	PF00005	ABC transporter
BJD12_10015	PF00270	DEAD/DEAH box helicase
BJD12_10015	PF00271	Helicase conserved C-terminal domain
BJD12_10015	PF12300	BJD12_10015
BJD12_10020	PF00085	Thioredoxin
BJD12_10025	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BJD12_10025	PF07497	Rho termination factor, RNA-binding domain
BJD12_10025	PF07498	Rho termination factor, N-terminal domain
BJD12_10035	PF06315	Isocitrate dehydrogenase kinase/phosphatase (AceK)
BJD12_10040	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_10040	PF03466	LysR substrate binding domain
BJD12_10050	PF03971	Monomeric isocitrate dehydrogenase
BJD12_10060	PF01476	LysM domain
BJD12_10065	PF14489	QueF-like protein
BJD12_10065	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
BJD12_10070	PF01546	Peptidase family M20/M25/M40
BJD12_10070	PF07687	Peptidase dimerisation domain
BJD12_10075	PF16576	BJD12_10075
BJD12_10085	PF00873	AcrB/AcrD/AcrF family
BJD12_10100	PF07063	Domain of unknown function (DUF1338)
BJD12_10115	PF13419	Haloacid dehalogenase-like hydrolase
BJD12_10120	PF13202	EF hand
BJD12_10125	PF13202	EF hand
BJD12_10135	PF14255	BJD12_10135
BJD12_10140	PF01427	D-ala-D-ala dipeptidase
BJD12_10145	PF01510	N-acetylmuramoyl-L-alanine amidase
BJD12_10150	PF00877	NlpC/P60 family
BJD12_10150	PF12913	SH3 domain of the SH3b1 type
BJD12_10150	PF12914	SH3 domain of SH3b2 type
BJD12_10155	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
BJD12_10155	PF13378	Enolase C-terminal domain-like
BJD12_10165	PF13520	Amino acid permease
BJD12_10180	PF05360	BJD12_10180
BJD12_10185	PF07995	Glucose / Sorbosone dehydrogenase
BJD12_10190	PF00933	Glycosyl hydrolase family 3 N terminal domain
BJD12_10190	PF01915	Glycosyl hydrolase family 3 C-terminal domain
BJD12_10190	PF14310	Fibronectin type III-like domain
BJD12_10195	PF02152	Dihydroneopterin aldolase
BJD12_10200	PF00814	Glycoprotease family
BJD12_10205	PF01165	Ribosomal protein S21
BJD12_10210	PF09424	Yqey-like protein
BJD12_10215	PF03631	BJD12_10215
BJD12_10220	PF01807	CHC2 zinc finger
BJD12_10220	PF08275	DNA primase catalytic core, N-terminal domain
BJD12_10220	PF08278	DNA primase DnaG DnaB-binding
BJD12_10220	PF10410	DnaB-helicase binding domain of primase
BJD12_10220	PF13155	Toprim-like
BJD12_10225	PF04273	Putative phosphatase (DUF442)
BJD12_10235	PF13593	SBF-like CPA transporter family (DUF4137)
BJD12_10240	PF13899	Thioredoxin-like
BJD12_10245	PF01040	UbiA prenyltransferase family
BJD12_10250	PF02628	BJD12_10250
BJD12_10260	PF02104	BJD12_10260
BJD12_10265	PF11137	BJD12_10265
BJD12_10270	PF00510	Cytochrome c oxidase subunit III
BJD12_10275	PF04442	Cytochrome c oxidase assembly protein CtaG/Cox11
BJD12_10285	PF00115	Cytochrome C and Quinol oxidase polypeptide I
BJD12_10290	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
BJD12_10290	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
BJD12_10295	PF10003	BJD12_10295
BJD12_10300	PF00171	Aldehyde dehydrogenase family
BJD12_10300	PF01619	Proline dehydrogenase
BJD12_10300	PF14850	DNA-binding domain of Proline dehydrogenase
BJD12_10330	PF00579	tRNA synthetases class I (W and Y)
BJD12_10335	PF01551	Peptidase family M23
BJD12_10335	PF04225	Opacity-associated protein A LysM-like domain
BJD12_10340	PF03702	Uncharacterised protein family (UPF0075)
BJD12_10350	PF07690	Major Facilitator Superfamily
BJD12_10360	PF03372	Endonuclease/Exonuclease/phosphatase family
BJD12_10365	PF00156	Phosphoribosyl transferase domain
BJD12_10375	PF13614	AAA domain
BJD12_10380	PF02195	ParB-like nuclease domain
BJD12_10385	PF11731	BJD12_10385
BJD12_10390	PF05076	Suppressor of fused protein (SUFU)
BJD12_10395	PF01370	NAD dependent epimerase/dehydratase family
BJD12_10400	PF00535	Glycosyl transferase family 2
BJD12_10405	PF07578	Lipid A Biosynthesis N-terminal domain
BJD12_10415	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
BJD12_10415	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
BJD12_10415	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
BJD12_10415	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
BJD12_10420	PF00692	dUTPase
BJD12_10425	PF02441	Flavoprotein
BJD12_10425	PF04127	DNA / pantothenate metabolism flavoprotein
BJD12_10430	PF04002	RadC-like JAB domain
BJD12_10435	PF00750	tRNA synthetases class I (R)
BJD12_10435	PF03485	Arginyl tRNA synthetase N terminal domain
BJD12_10435	PF05746	DALR anticodon binding domain
BJD12_10440	PF05036	Sporulation related domain
BJD12_10450	PF00106	short chain dehydrogenase
BJD12_10455	PF01757	BJD12_10455
BJD12_10465	PF03033	Glycosyltransferase family 28 N-terminal domain
BJD12_10475	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
BJD12_10480	PF01564	Spermine/spermidine synthase
BJD12_10480	PF17284	BJD12_10480
BJD12_10485	PF09851	BJD12_10485
BJD12_10485	PF14470	Bacterial PH domain
BJD12_10500	PF02838	Glycosyl hydrolase family 20, domain 2
BJD12_10500	PF07555	beta-N-acetylglucosaminidase
BJD12_10505	PF00543	Nitrogen regulatory protein P-II
BJD12_10510	PF04380	BJD12_10510
BJD12_10515	PF01078	Magnesium chelatase, subunit ChlI
BJD12_10515	PF13335	BJD12_10515
BJD12_10515	PF13541	Subunit ChlI of Mg-chelatase
BJD12_10520	PF08212	Lipocalin-like domain
BJD12_10530	PF00563	EAL domain
BJD12_10530	PF12792	BJD12_10530
BJD12_10535	PF00487	BJD12_10535
BJD12_10540	PF00111	2Fe-2S iron-sulfur cluster binding domain
BJD12_10540	PF00175	Oxidoreductase NAD-binding domain
BJD12_10540	PF00970	Oxidoreductase FAD-binding domain
BJD12_10545	PF00440	Bacterial regulatory proteins, tetR family
BJD12_10555	PF01145	SPFH domain / Band 7 family
BJD12_10560	PF01139	tRNA-splicing ligase RtcB
BJD12_10570	PF00326	Prolyl oligopeptidase family
BJD12_10575	PF11379	BJD12_10575
BJD12_10590	PF13628	BJD12_10590
BJD12_10595	PF01370	NAD dependent epimerase/dehydratase family
BJD12_10595	PF08338	Domain of unknown function (DUF1731)
BJD12_10600	PF00072	Response regulator receiver domain
BJD12_10600	PF00486	Transcriptional regulatory protein, C terminal
BJD12_10605	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_10605	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_10615	PF11769	BJD12_10615
BJD12_10625	PF13180	PDZ domain
BJD12_10625	PF13365	Trypsin-like peptidase domain
BJD12_10645	PF01594	BJD12_10645
BJD12_10650	PF13419	Haloacid dehalogenase-like hydrolase
BJD12_10655	PF00883	Cytosol aminopeptidase family, catalytic domain
BJD12_10665	PF00199	Catalase
BJD12_10670	PF01292	Prokaryotic cytochrome b561
BJD12_10675	PF06283	Trehalose utilisation
BJD12_10680	PF00072	Response regulator receiver domain
BJD12_10680	PF00196	Bacterial regulatory proteins, luxR family
BJD12_10690	PF07730	Histidine kinase
BJD12_10695	PF16576	BJD12_10695
BJD12_10700	PF00005	ABC transporter
BJD12_10705	PF02687	BJD12_10705
BJD12_10705	PF12704	MacB-like periplasmic core domain
BJD12_10710	PF02687	BJD12_10710
BJD12_10710	PF12704	MacB-like periplasmic core domain
BJD12_10715	PF12697	Alpha/beta hydrolase family
BJD12_10720	PF00892	EamA-like transporter family
BJD12_10725	PF00892	EamA-like transporter family
BJD12_10735	PF02225	PA domain
BJD12_10735	PF04389	Peptidase family M28
BJD12_10740	PF00753	Metallo-beta-lactamase superfamily
BJD12_10745	PF00579	tRNA synthetases class I (W and Y)
BJD12_10750	PF05532	CsbD-like
BJD12_10755	PF08085	BJD12_10755
BJD12_10760	PF08085	BJD12_10760
BJD12_10765	PF00491	Arginase family
BJD12_10770	PF03259	Roadblock/LC7 domain
BJD12_10790	PF02223	Thymidylate kinase
BJD12_10800	PF05036	Sporulation related domain
BJD12_10805	PF03309	Type III pantothenate kinase
BJD12_10810	PF02237	Biotin protein ligase C terminal domain
BJD12_10810	PF03099	Biotin/lipoate A/B protein ligase family
BJD12_10810	PF08279	HTH domain
BJD12_10825	PF07394	BJD12_10825
BJD12_10830	PF08811	BJD12_10830
BJD12_10835	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_10840	PF00072	Response regulator receiver domain
BJD12_10840	PF00486	Transcriptional regulatory protein, C terminal
BJD12_10850	PF01207	Dihydrouridine synthase (Dus)
BJD12_10865	PF12796	Ankyrin repeats (3 copies)
BJD12_10870	PF00199	Catalase
BJD12_10870	PF06628	Catalase-related immune-responsive
BJD12_10880	PF13307	Helicase C-terminal domain
BJD12_10895	PF01488	Shikimate / quinate 5-dehydrogenase
BJD12_10895	PF08501	Shikimate dehydrogenase substrate binding domain
BJD12_10900	PF07676	WD40-like Beta Propeller Repeat
BJD12_10905	PF00175	Oxidoreductase NAD-binding domain
BJD12_10905	PF00258	Flavodoxin
BJD12_10905	PF03929	BJD12_10905
BJD12_10915	PF00490	Delta-aminolevulinic acid dehydratase
BJD12_10935	PF05960	Bacterial protein of unknown function (DUF885)
BJD12_10940	PF08695	BJD12_10940
BJD12_10945	PF00326	Prolyl oligopeptidase family
BJD12_10945	PF00930	Dipeptidyl peptidase IV (DPP IV) N-terminal region
BJD12_10950	PF00043	Glutathione S-transferase, C-terminal domain
BJD12_10950	PF02798	Glutathione S-transferase, N-terminal domain
BJD12_10955	PF00593	TonB dependent receptor
BJD12_10955	PF07715	TonB-dependent Receptor Plug Domain
BJD12_10960	PF07277	BJD12_10960
BJD12_10965	PF13621	Cupin-like domain
BJD12_10970	PF04820	Tryptophan halogenase
BJD12_10975	PF03544	Gram-negative bacterial TonB protein C-terminal
BJD12_10980	PF12679	BJD12_10980
BJD12_10985	PF00005	ABC transporter
BJD12_10990	PF00561	alpha/beta hydrolase fold
BJD12_10990	PF08386	TAP-like protein
BJD12_10995	PF01381	Helix-turn-helix
BJD12_11005	PF01229	Glycosyl hydrolases family 39
BJD12_11010	PF02583	Metal-sensitive transcriptional repressor
BJD12_11015	PF01545	Cation efflux family
BJD12_11020	PF00175	Oxidoreductase NAD-binding domain
BJD12_11020	PF00970	Oxidoreductase FAD-binding domain
BJD12_11025	PF00005	ABC transporter
BJD12_11030	PF01061	BJD12_11030
BJD12_11035	PF02558	Ketopantoate reductase PanE/ApbA
BJD12_11035	PF08546	Ketopantoate reductase PanE/ApbA C terminal
BJD12_11045	PF03061	Thioesterase superfamily
BJD12_11050	PF00085	Thioredoxin
BJD12_11055	PF00258	Flavodoxin
BJD12_11060	PF06114	Domain of unknown function (DUF955)
BJD12_11065	PF00268	Ribonucleotide reductase, small chain
BJD12_11070	PF00317	Ribonucleotide reductase, all-alpha domain
BJD12_11070	PF02867	Ribonucleotide reductase, barrel domain
BJD12_11080	PF04332	BJD12_11080
BJD12_11085	PF13302	Acetyltransferase (GNAT) domain
BJD12_11085	PF13380	CoA binding domain
BJD12_11085	PF13549	ATP-grasp domain
BJD12_11085	PF13607	Succinyl-CoA ligase like flavodoxin domain
BJD12_11090	PF00571	CBS domain
BJD12_11090	PF01769	Divalent cation transporter
BJD12_11090	PF03448	MgtE intracellular N domain
BJD12_11100	PF00999	Sodium/hydrogen exchanger family
BJD12_11100	PF02254	TrkA-N domain
BJD12_11105	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
BJD12_11105	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
BJD12_11110	PF00723	Glycosyl hydrolases family 15
BJD12_11120	PF00023	Ankyrin repeat
BJD12_11120	PF12796	Ankyrin repeats (3 copies)
BJD12_11125	PF05166	YcgL domain
BJD12_11130	PF00109	Beta-ketoacyl synthase, N-terminal domain
BJD12_11130	PF02801	Beta-ketoacyl synthase, C-terminal domain
BJD12_11135	PF13723	BJD12_11135
BJD12_11140	PF00535	Glycosyl transferase family 2
BJD12_11145	PF04820	Tryptophan halogenase
BJD12_11145	PF13450	NAD(P)-binding Rossmann-like domain
BJD12_11150	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_11160	PF03176	MMPL family
BJD12_11170	PF03279	BJD12_11170
BJD12_11175	PF07977	FabA-like domain
BJD12_11180	PF01553	Acyltransferase
BJD12_11190	PF00550	Phosphopantetheine attachment site
BJD12_11195	PF01494	FAD binding domain
BJD12_11205	PF00501	AMP-binding enzyme
BJD12_11215	PF00326	Prolyl oligopeptidase family
BJD12_11215	PF00930	Dipeptidyl peptidase IV (DPP IV) N-terminal region
BJD12_11240	PF01218	Coproporphyrinogen III oxidase
BJD12_11245	PF00476	DNA polymerase family A
BJD12_11245	PF01367	5'-3' exonuclease, C-terminal SAM fold
BJD12_11245	PF01612	3'-5' exonuclease
BJD12_11245	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
BJD12_11250	PF11191	Protein of unknown function (DUF2782)
BJD12_11255	PF06812	BJD12_11255
BJD12_11260	PF05860	haemagglutination activity domain
BJD12_11265	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
BJD12_11265	PF08479	POTRA domain, ShlB-type
BJD12_11275	PF00069	Protein kinase domain
BJD12_11275	PF03781	Sulfatase-modifying factor enzyme 1
BJD12_11280	PF13672	Protein phosphatase 2C
BJD12_11285	PF09867	Uncharacterized protein conserved in bacteria (DUF2094)
BJD12_11290	PF06744	BJD12_11290
BJD12_11290	PF06761	BJD12_11290
BJD12_11290	PF14331	BJD12_11290
BJD12_11295	PF00691	OmpA family
BJD12_11295	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
BJD12_11300	PF05936	BJD12_11300
BJD12_11310	PF00248	Aldo/keto reductase family
BJD12_11315	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_11315	PF03466	LysR substrate binding domain
BJD12_11320	PF00498	FHA domain
BJD12_11335	PF05954	Phage late control gene D protein (GPD)
BJD12_11340	PF00515	Tetratricopeptide repeat
BJD12_11340	PF13174	Tetratricopeptide repeat
BJD12_11340	PF13181	Tetratricopeptide repeat
BJD12_11340	PF13489	Methyltransferase domain
BJD12_11345	PF05488	PAAR motif
BJD12_11350	PF00069	Protein kinase domain
BJD12_11350	PF13374	Tetratricopeptide repeat
BJD12_11350	PF13424	Tetratricopeptide repeat
BJD12_11355	PF07638	ECF sigma factor
BJD12_11360	PF13560	Helix-turn-helix domain
BJD12_11365	PF00043	Glutathione S-transferase, C-terminal domain
BJD12_11365	PF13417	Glutathione S-transferase, N-terminal domain
BJD12_11370	PF12697	Alpha/beta hydrolase family
BJD12_11375	PF06283	Trehalose utilisation
BJD12_11390	PF02517	CAAX protease self-immunity
BJD12_11405	PF00004	ATPase family associated with various cellular activities (AAA)
BJD12_11405	PF07724	AAA domain (Cdc48 subfamily)
BJD12_11405	PF10431	C-terminal, D2-small domain, of ClpB protein
BJD12_11410	PF06996	BJD12_11410
BJD12_11415	PF05947	BJD12_11415
BJD12_11420	PF04965	Gene 25-like lysozyme
BJD12_11425	PF07024	ImpE protein
BJD12_11430	PF05638	Protein of unknown function (DUF796)
BJD12_11435	PF05943	BJD12_11435
BJD12_11440	PF05591	BJD12_11440
BJD12_11445	PF12833	Helix-turn-helix domain
BJD12_11450	PF00582	Universal stress protein family
BJD12_11455	PF00132	Bacterial transferase hexapeptide (six repeats)
BJD12_11455	PF12464	Maltose acetyltransferase
BJD12_11455	PF14602	Hexapeptide repeat of succinyl-transferase
BJD12_11460	PF00580	UvrD/REP helicase N-terminal domain
BJD12_11460	PF13361	UvrD-like helicase C-terminal domain
BJD12_11465	PF13454	FAD-NAD(P)-binding
BJD12_11475	PF13091	PLD-like domain
BJD12_11475	PF13396	BJD12_11475
BJD12_11480	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_11480	PF03466	LysR substrate binding domain
BJD12_11485	PF03737	Demethylmenaquinone methyltransferase
BJD12_11490	PF04303	PrpF protein
BJD12_11495	PF04909	Amidohydrolase
BJD12_11500	PF00471	Ribosomal protein L33
BJD12_11505	PF00830	Ribosomal L28 family
BJD12_11510	PF00873	AcrB/AcrD/AcrF family
BJD12_11520	PF16576	BJD12_11520
BJD12_11525	PF02321	Outer membrane efflux protein
BJD12_11535	PF05960	Bacterial protein of unknown function (DUF885)
BJD12_11540	PF02527	rRNA small subunit methyltransferase G
BJD12_11545	PF09423	PhoD-like phosphatase
BJD12_11545	PF16655	BJD12_11545
BJD12_11550	PF01648	4'-phosphopantetheinyl transferase superfamily
BJD12_11555	PF04226	BJD12_11555
BJD12_11560	PF04828	Glutathione-dependent formaldehyde-activating enzyme
BJD12_11565	PF03372	Endonuclease/Exonuclease/phosphatase family
BJD12_11575	PF00474	Sodium:solute symporter family
BJD12_11580	PF04341	BJD12_11580
BJD12_11590	PF00501	AMP-binding enzyme
BJD12_11590	PF13193	AMP-binding enzyme C-terminal domain
BJD12_11590	PF16177	BJD12_11590
BJD12_11595	PF00072	Response regulator receiver domain
BJD12_11595	PF00196	Bacterial regulatory proteins, luxR family
BJD12_11605	PF14415	Domain of unknown function (DUF4424)
BJD12_11610	PF00578	AhpC/TSA family
BJD12_11620	PF04616	Glycosyl hydrolases family 43
BJD12_11625	PF00248	Aldo/keto reductase family
BJD12_11630	PF04909	Amidohydrolase
BJD12_11635	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_11640	PF01557	Fumarylacetoacetate (FAA) hydrolase family
BJD12_11645	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
BJD12_11645	PF13378	Enolase C-terminal domain-like
BJD12_11650	PF05336	Domain of unknown function (DUF718)
BJD12_11655	PF07690	Major Facilitator Superfamily
BJD12_11660	PF01614	Bacterial transcriptional regulator
BJD12_11660	PF09339	IclR helix-turn-helix domain
BJD12_11665	PF02659	BJD12_11665
BJD12_11670	PF00072	Response regulator receiver domain
BJD12_11670	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_11670	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_11670	PF12860	BJD12_11670
BJD12_11685	PF06165	Glycosyltransferase family 36
BJD12_11685	PF17167	BJD12_11685
BJD12_11690	PF13347	MFS/sugar transport protein
BJD12_11695	PF01202	Shikimate kinase
BJD12_11700	PF13360	PQQ-like domain
BJD12_11720	PF04357	BJD12_11720
BJD12_11725	PF01103	Surface antigen
BJD12_11725	PF07244	Surface antigen variable number repeat
BJD12_11725	PF17243	BJD12_11725
BJD12_11730	PF00593	TonB dependent receptor
BJD12_11730	PF07715	TonB-dependent Receptor Plug Domain
BJD12_11735	PF13469	Sulfotransferase family
BJD12_11740	PF02092	BJD12_11740
BJD12_11740	PF05746	DALR anticodon binding domain
BJD12_11745	PF02091	Glycyl-tRNA synthetase alpha subunit
BJD12_11750	PF00437	Type II/IV secretion system protein
BJD12_11750	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
BJD12_11760	PF00117	Glutamine amidotransferase class-I
BJD12_11775	PF00902	Sec-independent protein translocase protein (TatC)
BJD12_11780	PF02416	mttA/Hcf106 family
BJD12_11785	PF02416	mttA/Hcf106 family
BJD12_11790	PF04366	BJD12_11790
BJD12_11795	PF00762	Ferrochelatase
BJD12_11800	PF00561	alpha/beta hydrolase fold
BJD12_11810	PF01863	Protein of unknown function DUF45
BJD12_11815	PF04381	Putative exonuclease, RdgC
BJD12_11820	PF01171	PP-loop family
BJD12_11835	PF00356	Bacterial regulatory proteins, lacI family
BJD12_11835	PF13377	Periplasmic binding protein-like domain
BJD12_11840	PF03648	Glycosyl hydrolase family 67 N-terminus
BJD12_11840	PF07477	Glycosyl hydrolase family 67 C-terminus
BJD12_11840	PF07488	Glycosyl hydrolase family 67 middle domain
BJD12_11845	PF02837	Glycosyl hydrolases family 2, sugar binding domain
BJD12_11845	PF03629	Domain of unknown function (DUF303)
BJD12_11850	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
BJD12_11850	PF13378	Enolase C-terminal domain-like
BJD12_11855	PF04616	Glycosyl hydrolases family 43
BJD12_11860	PF00933	Glycosyl hydrolase family 3 N terminal domain
BJD12_11860	PF01915	Glycosyl hydrolase family 3 C-terminal domain
BJD12_11860	PF07691	PA14 domain
BJD12_11860	PF14310	Fibronectin type III-like domain
BJD12_11865	PF01232	Mannitol dehydrogenase Rossmann domain
BJD12_11865	PF08125	Mannitol dehydrogenase C-terminal domain
BJD12_11870	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BJD12_11875	PF13588	Type I restriction enzyme R protein N terminus (HSDR_N)
BJD12_11880	PF10013	BJD12_11880
BJD12_11890	PF01344	Kelch motif
BJD12_11890	PF13964	Kelch motif
BJD12_11895	PF08450	SMP-30/Gluconolaconase/LRE-like region
BJD12_11905	PF00703	Glycosyl hydrolases family 2
BJD12_11905	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
BJD12_11905	PF02837	Glycosyl hydrolases family 2, sugar binding domain
BJD12_11905	PF16355	BJD12_11905
BJD12_11910	PF02614	Glucuronate isomerase
BJD12_11915	PF00331	Glycosyl hydrolase family 10
BJD12_11920	PF07690	Major Facilitator Superfamily
BJD12_11925	PF00593	TonB dependent receptor
BJD12_11925	PF07715	TonB-dependent Receptor Plug Domain
BJD12_11930	PF13347	MFS/sugar transport protein
BJD12_11935	PF04616	Glycosyl hydrolases family 43
BJD12_11940	PF08212	Lipocalin-like domain
BJD12_11955	PF04325	Protein of unknown function (DUF465)
BJD12_11965	PF00107	Zinc-binding dehydrogenase
BJD12_11965	PF08240	Alcohol dehydrogenase GroES-like domain
BJD12_11970	PF01553	Acyltransferase
BJD12_11980	PF00356	Bacterial regulatory proteins, lacI family
BJD12_11980	PF13377	Periplasmic binding protein-like domain
BJD12_11985	PF00593	TonB dependent receptor
BJD12_11985	PF13620	Carboxypeptidase regulatory-like domain
BJD12_11990	PF00593	TonB dependent receptor
BJD12_11995	PF04820	Tryptophan halogenase
BJD12_12000	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
BJD12_12005	PF03767	HAD superfamily, subfamily IIIB (Acid phosphatase)
BJD12_12010	PF04337	Protein of unknown function, DUF480
BJD12_12015	PF14094	BJD12_12015
BJD12_12020	PF13302	Acetyltransferase (GNAT) domain
BJD12_12025	PF00580	UvrD/REP helicase N-terminal domain
BJD12_12025	PF13361	UvrD-like helicase C-terminal domain
BJD12_12030	PF00265	Thymidine kinase
BJD12_12035	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_12035	PF01590	GAF domain
BJD12_12040	PF04349	Periplasmic glucan biosynthesis protein, MdoG
BJD12_12045	PF14315	BJD12_12045
BJD12_12050	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
BJD12_12050	PF06827	Zinc finger found in FPG and IleRS
BJD12_12050	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
BJD12_12080	PF03594	BJD12_12080
BJD12_12085	PF00360	Phytochrome region
BJD12_12085	PF01590	GAF domain
BJD12_12085	PF08446	PAS fold
BJD12_12085	PF13426	PAS domain
BJD12_12090	PF01126	Heme oxygenase
BJD12_12095	PF07690	Major Facilitator Superfamily
BJD12_12100	PF01263	Aldose 1-epimerase
BJD12_12100	PF01471	Putative peptidoglycan binding domain
BJD12_12100	PF13406	Transglycosylase SLT domain
BJD12_12110	PF02810	SEC-C motif
BJD12_12115	PF01925	BJD12_12115
BJD12_12120	PF13555	P-loop containing region of AAA domain
BJD12_12120	PF13558	Putative exonuclease SbcCD, C subunit
BJD12_12125	PF13835	BJD12_12125
BJD12_12130	PF11855	BJD12_12130
BJD12_12135	PF01227	GTP cyclohydrolase I
BJD12_12140	PF12802	MarR family
BJD12_12145	PF07869	BJD12_12145
BJD12_12150	PF13437	HlyD family secretion protein
BJD12_12150	PF13533	Biotin-lipoyl like
BJD12_12155	PF02321	Outer membrane efflux protein
BJD12_12160	PF04632	BJD12_12160
BJD12_12165	PF00083	Sugar (and other) transporter
BJD12_12170	PF08922	Domain of unknown function (DUF1905)
BJD12_12170	PF13376	BJD12_12170
BJD12_12175	PF13091	PLD-like domain
BJD12_12190	PF05016	Plasmid stabilisation system protein
BJD12_12200	PF00756	Putative esterase
BJD12_12205	PF09722	BJD12_12205
BJD12_12215	PF10067	BJD12_12215
BJD12_12220	PF07080	Protein of unknown function (DUF1348)
BJD12_12225	PF00440	Bacterial regulatory proteins, tetR family
BJD12_12235	PF00849	RNA pseudouridylate synthase
BJD12_12255	PF01396	BJD12_12255
BJD12_12255	PF04471	Restriction endonuclease
BJD12_12275	PF09386	Antitoxin ParD
BJD12_12285	PF13245	Part of AAA domain
BJD12_12285	PF13538	UvrD-like helicase C-terminal domain
BJD12_12290	PF00580	UvrD/REP helicase N-terminal domain
BJD12_12290	PF12705	PD-(D/E)XK nuclease superfamily
BJD12_12290	PF13361	UvrD-like helicase C-terminal domain
BJD12_12295	PF04257	Exodeoxyribonuclease V, gamma subunit
BJD12_12310	PF07484	Phage Tail Collar Domain
BJD12_12315	PF07484	Phage Tail Collar Domain
BJD12_12320	PF07484	Phage Tail Collar Domain
BJD12_12325	PF13508	Acetyltransferase (GNAT) domain
BJD12_12335	PF00005	ABC transporter
BJD12_12340	PF02405	BJD12_12340
BJD12_12345	PF02470	BJD12_12345
BJD12_12350	PF05494	Toluene tolerance, Ttg2
BJD12_12355	PF13466	STAS domain
BJD12_12360	PF04333	BJD12_12360
BJD12_12365	PF08867	BJD12_12365
BJD12_12370	PF00255	Glutathione peroxidase
BJD12_12380	PF02646	BJD12_12380
BJD12_12385	PF08240	Alcohol dehydrogenase GroES-like domain
BJD12_12385	PF13602	Zinc-binding dehydrogenase
BJD12_12390	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_12390	PF03466	LysR substrate binding domain
BJD12_12400	PF13417	Glutathione S-transferase, N-terminal domain
BJD12_12410	PF13520	Amino acid permease
BJD12_12415	PF07971	Glycosyl hydrolase family 92
BJD12_12420	PF00593	TonB dependent receptor
BJD12_12420	PF07715	TonB-dependent Receptor Plug Domain
BJD12_12425	PF10947	BJD12_12425
BJD12_12430	PF00990	GGDEF domain
BJD12_12430	PF01590	GAF domain
BJD12_12430	PF08448	PAS fold
BJD12_12435	PF02595	Glycerate kinase family
BJD12_12440	PF01244	Membrane dipeptidase (Peptidase family M19)
BJD12_12455	PF10672	S-adenosylmethionine-dependent methyltransferase
BJD12_12465	PF03741	BJD12_12465
BJD12_12475	PF01694	Rhomboid family
BJD12_12480	PF03009	Glycerophosphoryl diester phosphodiesterase family
BJD12_12485	PF00593	TonB dependent receptor
BJD12_12485	PF07715	TonB-dependent Receptor Plug Domain
BJD12_12490	PF01569	PAP2 superfamily
BJD12_12495	PF01926	50S ribosome-binding GTPase
BJD12_12495	PF10396	GTP-binding protein TrmE N-terminus
BJD12_12495	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
BJD12_12505	PF00656	Caspase domain
BJD12_12505	PF01522	Polysaccharide deacetylase
BJD12_12505	PF13424	Tetratricopeptide repeat
BJD12_12510	PF02096	60Kd inner membrane protein
BJD12_12510	PF14849	YidC periplasmic domain
BJD12_12515	PF00825	Ribonuclease P
BJD12_12520	PF00468	Ribosomal protein L34
BJD12_12530	PF00308	Bacterial dnaA  protein
BJD12_12530	PF08299	Bacterial dnaA protein helix-turn-helix
BJD12_12530	PF11638	DnaA N-terminal domain
BJD12_12535	PF00712	DNA polymerase III beta subunit, N-terminal domain
BJD12_12535	PF02767	DNA polymerase III beta subunit, central domain
BJD12_12535	PF02768	DNA polymerase III beta subunit, C-terminal domain
BJD12_12540	PF02463	RecF/RecN/SMC N terminal domain
BJD12_12545	PF00204	DNA gyrase B
BJD12_12545	PF00986	DNA gyrase B subunit, carboxyl terminus
BJD12_12545	PF01751	Toprim domain
BJD12_12545	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_12550	PF02517	CAAX protease self-immunity
BJD12_12555	PF01435	Peptidase family M48
BJD12_12560	PF09295	ChAPs (Chs5p-Arf1p-binding proteins)
BJD12_12565	PF03544	Gram-negative bacterial TonB protein C-terminal
BJD12_12570	PF01618	BJD12_12570
BJD12_12575	PF02472	Biopolymer transport protein ExbD/TolR
BJD12_12580	PF02472	Biopolymer transport protein ExbD/TolR
BJD12_12590	PF02472	Biopolymer transport protein ExbD/TolR
BJD12_12600	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
BJD12_12610	PF13091	PLD-like domain
BJD12_12610	PF13396	BJD12_12610
BJD12_12620	PF13640	2OG-Fe(II) oxygenase superfamily
BJD12_12630	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
BJD12_12635	PF01694	Rhomboid family
BJD12_12640	PF08850	BJD12_12640
BJD12_12645	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BJD12_12645	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BJD12_12650	PF03572	Peptidase family S41
BJD12_12650	PF13180	PDZ domain
BJD12_12660	PF01551	Peptidase family M23
BJD12_12670	PF02225	PA domain
BJD12_12670	PF04389	Peptidase family M28
BJD12_12675	PF13670	BJD12_12675
BJD12_12680	PF00150	Cellulase (glycosyl hydrolase family 5)
BJD12_12685	PF00150	Cellulase (glycosyl hydrolase family 5)
BJD12_12690	PF00150	Cellulase (glycosyl hydrolase family 5)
BJD12_12695	PF00107	Zinc-binding dehydrogenase
BJD12_12695	PF08240	Alcohol dehydrogenase GroES-like domain
BJD12_12700	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BJD12_12700	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
BJD12_12705	PF00310	Glutamine amidotransferases class-II
BJD12_12705	PF01493	GXGXG motif
BJD12_12705	PF01645	Conserved region in glutamate synthase
BJD12_12705	PF04898	Glutamate synthase central domain
BJD12_12710	PF11720	Peptidase inhibitor I78 family
BJD12_12715	PF01028	Eukaryotic DNA topoisomerase I, catalytic core
BJD12_12730	PF01804	Penicillin amidase
BJD12_12735	PF05368	NmrA-like family
BJD12_12740	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_12740	PF03466	LysR substrate binding domain
BJD12_12745	PF03466	LysR substrate binding domain
BJD12_12750	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_12750	PF03466	LysR substrate binding domain
BJD12_12755	PF13564	BJD12_12755
BJD12_12760	PF02678	Pirin
BJD12_12765	PF03965	Penicillinase repressor
BJD12_12770	PF05569	BlaR1 peptidase M56
BJD12_12795	PF03435	Saccharopine dehydrogenase
BJD12_12800	PF08975	Domain of unknown function (DUF1868)
BJD12_12805	PF00593	TonB dependent receptor
BJD12_12805	PF07715	TonB-dependent Receptor Plug Domain
BJD12_12810	PF00480	ROK family
BJD12_12815	PF03009	Glycerophosphoryl diester phosphodiesterase family
BJD12_12820	PF13482	RNase_H superfamily
BJD12_12825	PF00270	DEAD/DEAH box helicase
BJD12_12825	PF00271	Helicase conserved C-terminal domain
BJD12_12825	PF09369	BJD12_12825
BJD12_12830	PF03006	BJD12_12830
BJD12_12835	PF14305	BJD12_12835
BJD12_12840	PF02798	Glutathione S-transferase, N-terminal domain
BJD12_12840	PF13410	Glutathione S-transferase, C-terminal domain
BJD12_12850	PF01431	Peptidase family M13
BJD12_12850	PF05649	Peptidase family M13
BJD12_12855	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_12855	PF03466	LysR substrate binding domain
BJD12_12860	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_12865	PF13410	Glutathione S-transferase, C-terminal domain
BJD12_12865	PF13417	Glutathione S-transferase, N-terminal domain
BJD12_12880	PF02525	Flavodoxin-like fold
BJD12_12885	PF12680	SnoaL-like domain
BJD12_12890	PF01638	HxlR-like helix-turn-helix
BJD12_12920	PF07690	Major Facilitator Superfamily
BJD12_12925	PF05532	CsbD-like
BJD12_12930	PF00072	Response regulator receiver domain
BJD12_12930	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_12930	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_12930	PF08447	PAS fold
BJD12_12930	PF08448	PAS fold
BJD12_12940	PF00450	Serine carboxypeptidase
BJD12_12945	PF08668	HDOD domain
BJD12_12950	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
BJD12_12965	PF13460	NADH(P)-binding
BJD12_12970	PF00440	Bacterial regulatory proteins, tetR family
BJD12_12975	PF07690	Major Facilitator Superfamily
BJD12_12980	PF00293	NUDIX domain
BJD12_12985	PF01435	Peptidase family M48
BJD12_12990	PF01594	BJD12_12990
BJD12_12995	PF07859	alpha/beta hydrolase fold
BJD12_13000	PF10116	BJD12_13000
BJD12_13005	PF00085	Thioredoxin
BJD12_13010	PF00083	Sugar (and other) transporter
BJD12_13015	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
BJD12_13020	PF12787	BJD12_13020
BJD12_13025	PF14485	BJD12_13025
BJD12_13030	PF06080	BJD12_13030
BJD12_13045	PF07584	BJD12_13045
BJD12_13050	PF01882	BJD12_13050
BJD12_13055	PF07726	ATPase family associated with various cellular activities (AAA)
BJD12_13060	PF13709	Domain of unknown function (DUF4159)
BJD12_13065	PF01523	Putative modulator of DNA gyrase
BJD12_13070	PF01523	Putative modulator of DNA gyrase
BJD12_13085	PF01523	Putative modulator of DNA gyrase
BJD12_13090	PF06441	Epoxide hydrolase N terminus
BJD12_13095	PF05368	NmrA-like family
BJD12_13100	PF00440	Bacterial regulatory proteins, tetR family
BJD12_13105	PF00316	Fructose-1-6-bisphosphatase
BJD12_13110	PF00155	Aminotransferase class I and II
BJD12_13115	PF00593	TonB dependent receptor
BJD12_13115	PF07715	TonB-dependent Receptor Plug Domain
BJD12_13135	PF00171	Aldehyde dehydrogenase family
BJD12_13140	PF00107	Zinc-binding dehydrogenase
BJD12_13140	PF08240	Alcohol dehydrogenase GroES-like domain
BJD12_13145	PF05610	BJD12_13145
BJD12_13155	PF02735	Ku70/Ku80 beta-barrel domain
BJD12_13160	PF01068	ATP dependent DNA ligase domain
BJD12_13160	PF04679	ATP dependent DNA ligase C terminal region
BJD12_13165	PF01070	FMN-dependent dehydrogenase
BJD12_13170	PF03055	Retinal pigment epithelial membrane protein
BJD12_13175	PF09912	BJD12_13175
BJD12_13180	PF04191	Phospholipid methyltransferase
BJD12_13185	PF07730	Histidine kinase
BJD12_13190	PF00072	Response regulator receiver domain
BJD12_13190	PF00196	Bacterial regulatory proteins, luxR family
BJD12_13200	PF00486	Transcriptional regulatory protein, C terminal
BJD12_13200	PF13191	AAA ATPase domain
BJD12_13205	PF07055	Enoyl reductase FAD binding domain
BJD12_13205	PF12241	Trans-2-enoyl-CoA reductase catalytic region
BJD12_13205	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
BJD12_13215	PF00294	pfkB family carbohydrate kinase
BJD12_13220	PF00593	TonB dependent receptor
BJD12_13220	PF07715	TonB-dependent Receptor Plug Domain
BJD12_13225	PF00593	TonB dependent receptor
BJD12_13225	PF07715	TonB-dependent Receptor Plug Domain
BJD12_13230	PF01095	Pectinesterase
BJD12_13235	PF09492	Pectic acid lyase
BJD12_13240	PF13385	Concanavalin A-like lectin/glucanases superfamily
BJD12_13255	PF13619	BJD12_13255
BJD12_13265	PF01527	Transposase
BJD12_13275	PF00795	Carbon-nitrogen hydrolase
BJD12_13290	PF13628	BJD12_13290
BJD12_13315	PF11896	Domain of unknown function (DUF3416)
BJD12_13320	PF00128	Alpha amylase, catalytic domain
BJD12_13320	PF16657	BJD12_13320
BJD12_13325	PF00128	Alpha amylase, catalytic domain
BJD12_13325	PF02806	Alpha amylase, C-terminal all-beta domain
BJD12_13325	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
BJD12_13345	PF03929	BJD12_13345
BJD12_13350	PF12850	Calcineurin-like phosphoesterase superfamily domain
BJD12_13355	PF00248	Aldo/keto reductase family
BJD12_13360	PF13472	GDSL-like Lipase/Acylhydrolase family
BJD12_13365	PF00135	Carboxylesterase family
BJD12_13370	PF07859	alpha/beta hydrolase fold
BJD12_13380	PF03480	Bacterial extracellular solute-binding protein, family 7
BJD12_13385	PF04290	BJD12_13385
BJD12_13390	PF06808	BJD12_13390
BJD12_13395	PF04616	Glycosyl hydrolases family 43
BJD12_13400	PF00356	Bacterial regulatory proteins, lacI family
BJD12_13400	PF13377	Periplasmic binding protein-like domain
BJD12_13410	PF04962	KduI/IolB family
BJD12_13415	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_13420	PF02502	Ribose/Galactose Isomerase
BJD12_13420	PF12408	Ribose-5-phosphate isomerase
BJD12_13425	PF07883	Cupin domain
BJD12_13425	PF13472	GDSL-like Lipase/Acylhydrolase family
BJD12_13430	PF14300	Domain of unknown function (DUF4375)
BJD12_13435	PF00351	Biopterin-dependent aromatic amino acid hydroxylase
BJD12_13440	PF01037	AsnC family
BJD12_13440	PF13404	AsnC-type helix-turn-helix domain
BJD12_13450	PF00593	TonB dependent receptor
BJD12_13450	PF07715	TonB-dependent Receptor Plug Domain
BJD12_13455	PF01734	Patatin-like phospholipase
BJD12_13460	PF01987	Mitochondrial biogenesis AIM24
BJD12_13465	PF00005	ABC transporter
BJD12_13470	PF00487	BJD12_13470
BJD12_13475	PF13202	EF hand
BJD12_13480	PF00005	ABC transporter
BJD12_13485	PF00528	Binding-protein-dependent transport system inner membrane component
BJD12_13485	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
BJD12_13490	PF00266	Aminotransferase class-V
BJD12_13495	PF03781	Sulfatase-modifying factor enzyme 1
BJD12_13495	PF12867	DinB superfamily
BJD12_13500	PF10017	BJD12_13500
BJD12_13505	PF11625	Protein of unknown function (DUF3253)
BJD12_13510	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
BJD12_13520	PF03547	BJD12_13520
BJD12_13525	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
BJD12_13530	PF00300	Histidine phosphatase superfamily (branch 1)
BJD12_13535	PF04264	YceI-like domain
BJD12_13540	PF13091	PLD-like domain
BJD12_13550	PF03061	Thioesterase superfamily
BJD12_13555	PF01553	Acyltransferase
BJD12_13560	PF12697	Alpha/beta hydrolase family
BJD12_13565	PF13432	Tetratricopeptide repeat
BJD12_13570	PF01161	Phosphatidylethanolamine-binding protein
BJD12_13580	PF02673	BJD12_13580
BJD12_13590	PF00120	Glutamine synthetase, catalytic domain
BJD12_13590	PF03951	Glutamine synthetase, beta-Grasp domain
BJD12_13595	PF00543	Nitrogen regulatory protein P-II
BJD12_13600	PF00909	Ammonium Transporter Family
BJD12_13605	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_13605	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_13610	PF00072	Response regulator receiver domain
BJD12_13610	PF00158	Sigma-54 interaction domain
BJD12_13610	PF02954	Bacterial regulatory protein, Fis family
BJD12_13615	PF00080	Copper/zinc superoxide dismutase (SODC)
BJD12_13620	PF00080	Copper/zinc superoxide dismutase (SODC)
BJD12_13635	PF00108	Thiolase, N-terminal domain
BJD12_13635	PF02803	Thiolase, C-terminal domain
BJD12_13645	PF07219	BJD12_13645
BJD12_13650	PF04375	BJD12_13650
BJD12_13655	PF02602	Uroporphyrinogen-III synthase HemD
BJD12_13660	PF01755	BJD12_13660
BJD12_13665	PF09500	Putative thioesterase (yiiD_Cterm)
BJD12_13675	PF00581	Rhodanese-like domain
BJD12_13680	PF02556	Preprotein translocase subunit SecB
BJD12_13685	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
BJD12_13685	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
BJD12_13695	PF00205	Thiamine pyrophosphate enzyme, central domain
BJD12_13695	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BJD12_13695	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BJD12_13700	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_13700	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_13705	PF00072	Response regulator receiver domain
BJD12_13705	PF00158	Sigma-54 interaction domain
BJD12_13705	PF02954	Bacterial regulatory protein, Fis family
BJD12_13720	PF07690	Major Facilitator Superfamily
BJD12_13725	PF00588	SpoU rRNA Methylase family
BJD12_13735	PF13698	BJD12_13735
BJD12_13740	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
BJD12_13740	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
BJD12_13745	PF02661	Fic/DOC family
BJD12_13745	PF13784	Fic/DOC family N-terminal
BJD12_13750	PF00561	alpha/beta hydrolase fold
BJD12_13755	PF03692	BJD12_13755
BJD12_13760	PF00501	AMP-binding enzyme
BJD12_13765	PF01073	3-beta hydroxysteroid dehydrogenase/isomerase family
BJD12_13770	PF07043	BJD12_13770
BJD12_13775	PF00583	Acetyltransferase (GNAT) family
BJD12_13780	PF01820	D-ala D-ala ligase N-terminus
BJD12_13780	PF07478	D-ala D-ala ligase C-terminus
BJD12_13785	PF02036	SCP-2 sterol transfer family
BJD12_13790	PF03109	BJD12_13790
BJD12_13795	PF07883	Cupin domain
BJD12_13800	PF00849	RNA pseudouridylate synthase
BJD12_13805	PF09832	Uncharacterized protein conserved in bacteria (DUF2059)
BJD12_13810	PF00472	RF-1 domain
BJD12_13815	PF01553	Acyltransferase
BJD12_13830	PF01432	Peptidase family M3
BJD12_13835	PF01432	Peptidase family M3
BJD12_13845	PF12706	Beta-lactamase superfamily domain
BJD12_13850	PF00440	Bacterial regulatory proteins, tetR family
BJD12_13850	PF14246	AefR-like transcriptional repressor, C-terminal region
BJD12_13855	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BJD12_13860	PF12833	Helix-turn-helix domain
BJD12_13865	PF00999	Sodium/hydrogen exchanger family
BJD12_13870	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_13870	PF03466	LysR substrate binding domain
BJD12_13875	PF01274	Malate synthase
BJD12_13880	PF00463	Isocitrate lyase family
BJD12_13885	PF00027	Cyclic nucleotide-binding domain
BJD12_13885	PF00990	GGDEF domain
BJD12_13900	PF00881	Nitroreductase family
BJD12_13905	PF00326	Prolyl oligopeptidase family
BJD12_13910	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
BJD12_13910	PF00364	Biotin-requiring enzyme
BJD12_13910	PF02785	Biotin carboxylase C-terminal domain
BJD12_13910	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BJD12_13915	PF01039	Carboxyl transferase domain
BJD12_13920	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BJD12_13920	PF02770	Acyl-CoA dehydrogenase, middle domain
BJD12_13920	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BJD12_13925	PF00440	Bacterial regulatory proteins, tetR family
BJD12_13935	PF08808	BJD12_13935
BJD12_13940	PF11804	BJD12_13940
BJD12_13945	PF03929	BJD12_13945
BJD12_13950	PF12365	BJD12_13950
BJD12_13960	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
BJD12_13965	PF03372	Endonuclease/Exonuclease/phosphatase family
BJD12_13975	PF03203	BJD12_13975
BJD12_13980	PF02492	CobW/HypB/UreG, nucleotide-binding domain
BJD12_13980	PF07683	Cobalamin synthesis protein cobW C-terminal domain
BJD12_14000	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
BJD12_14005	PF03969	AFG1-like ATPase
BJD12_14010	PF01047	MarR family
BJD12_14015	PF02566	OsmC-like protein
BJD12_14020	PF07859	alpha/beta hydrolase fold
BJD12_14025	PF12697	Alpha/beta hydrolase family
BJD12_14030	PF11101	BJD12_14030
BJD12_14045	PF00248	Aldo/keto reductase family
BJD12_14050	PF00107	Zinc-binding dehydrogenase
BJD12_14050	PF16884	BJD12_14050
BJD12_14055	PF00248	Aldo/keto reductase family
BJD12_14065	PF00849	RNA pseudouridylate synthase
BJD12_14080	PF00271	Helicase conserved C-terminal domain
BJD12_14080	PF04408	Helicase associated domain (HA2)
BJD12_14080	PF08482	BJD12_14080
BJD12_14085	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_14085	PF00672	HAMP domain
BJD12_14090	PF07308	BJD12_14090
BJD12_14095	PF00576	HIUase/Transthyretin family
BJD12_14100	PF13738	Pyridine nucleotide-disulphide oxidoreductase
BJD12_14105	PF09349	OHCU decarboxylase
BJD12_14110	PF11533	Protein of unknown function (DUF3225)
BJD12_14115	PF01522	Polysaccharide deacetylase
BJD12_14120	PF00266	Aminotransferase class-V
BJD12_14125	PF01546	Peptidase family M20/M25/M40
BJD12_14125	PF07687	Peptidase dimerisation domain
BJD12_14130	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_14130	PF03466	LysR substrate binding domain
BJD12_14135	PF07690	Major Facilitator Superfamily
BJD12_14145	PF13374	Tetratricopeptide repeat
BJD12_14150	PF01019	Gamma-glutamyltranspeptidase
BJD12_14155	PF01425	Amidase
BJD12_14160	PF01156	Inosine-uridine preferring nucleoside hydrolase
BJD12_14165	PF00962	Adenosine/AMP deaminase
BJD12_14170	PF00860	Permease family
BJD12_14175	PF00111	2Fe-2S iron-sulfur cluster binding domain
BJD12_14175	PF00175	Oxidoreductase NAD-binding domain
BJD12_14175	PF00970	Oxidoreductase FAD-binding domain
BJD12_14180	PF00355	Rieske [2Fe-2S] domain
BJD12_14185	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_14185	PF03466	LysR substrate binding domain
BJD12_14190	PF01026	TatD related DNase
BJD12_14205	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_14205	PF03466	LysR substrate binding domain
BJD12_14210	PF07690	Major Facilitator Superfamily
BJD12_14220	PF00593	TonB dependent receptor
BJD12_14220	PF07715	TonB-dependent Receptor Plug Domain
BJD12_14225	PF00106	short chain dehydrogenase
BJD12_14230	PF00440	Bacterial regulatory proteins, tetR family
BJD12_14235	PF02146	Sir2 family
BJD12_14240	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
BJD12_14245	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BJD12_14245	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
BJD12_14255	PF00551	Formyl transferase
BJD12_14255	PF01842	ACT domain
BJD12_14260	PF12833	Helix-turn-helix domain
BJD12_14260	PF12852	Cupin
BJD12_14265	PF00106	short chain dehydrogenase
BJD12_14275	PF02219	Methylenetetrahydrofolate reductase
BJD12_14280	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_14280	PF03466	LysR substrate binding domain
BJD12_14285	PF03358	NADPH-dependent FMN reductase
BJD12_14290	PF08908	BJD12_14290
BJD12_14295	PF01717	Cobalamin-independent synthase, Catalytic domain
BJD12_14300	PF03812	BJD12_14300
BJD12_14310	PF00440	Bacterial regulatory proteins, tetR family
BJD12_14315	PF00106	short chain dehydrogenase
BJD12_14320	PF08240	Alcohol dehydrogenase GroES-like domain
BJD12_14320	PF13602	Zinc-binding dehydrogenase
BJD12_14325	PF00107	Zinc-binding dehydrogenase
BJD12_14325	PF08240	Alcohol dehydrogenase GroES-like domain
BJD12_14330	PF01638	HxlR-like helix-turn-helix
BJD12_14335	PF07396	Phosphate-selective porin O and P
BJD12_14340	PF05368	NmrA-like family
BJD12_14345	PF01638	HxlR-like helix-turn-helix
BJD12_14355	PF17263	BJD12_14355
BJD12_14365	PF03992	Antibiotic biosynthesis monooxygenase
BJD12_14380	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BJD12_14420	PF07661	BJD12_14420
BJD12_14435	PF13620	Carboxypeptidase regulatory-like domain
BJD12_14450	PF00589	Phage integrase family
BJD12_14450	PF13495	Phage integrase, N-terminal SAM-like domain
BJD12_14455	PF00920	Dehydratase family
BJD12_14465	PF00132	Bacterial transferase hexapeptide (six repeats)
BJD12_14470	PF07690	Major Facilitator Superfamily
BJD12_14475	PF11871	BJD12_14475
BJD12_14475	PF13487	HD domain
BJD12_14480	PF12802	MarR family
BJD12_14490	PF13557	BJD12_14490
BJD12_14495	PF00106	short chain dehydrogenase
BJD12_14495	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_14500	PF00171	Aldehyde dehydrogenase family
BJD12_14505	PF02311	AraC-like ligand binding domain
BJD12_14505	PF12833	Helix-turn-helix domain
BJD12_14510	PF01494	FAD binding domain
BJD12_14515	PF12680	SnoaL-like domain
BJD12_14520	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BJD12_14520	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BJD12_14525	PF00230	Major intrinsic protein
BJD12_14530	PF01266	FAD dependent oxidoreductase
BJD12_14530	PF16901	BJD12_14530
BJD12_14535	PF00455	BJD12_14535
BJD12_14535	PF08220	DeoR-like helix-turn-helix domain
BJD12_14540	PF00111	2Fe-2S iron-sulfur cluster binding domain
BJD12_14540	PF00175	Oxidoreductase NAD-binding domain
BJD12_14540	PF00970	Oxidoreductase FAD-binding domain
BJD12_14545	PF00392	Bacterial regulatory proteins, gntR family
BJD12_14545	PF07729	FCD domain
BJD12_14550	PF00355	Rieske [2Fe-2S] domain
BJD12_14555	PF01144	Coenzyme A transferase
BJD12_14560	PF01144	Coenzyme A transferase
BJD12_14565	PF00108	Thiolase, N-terminal domain
BJD12_14565	PF02803	Thiolase, C-terminal domain
BJD12_14570	PF00775	Dioxygenase
BJD12_14570	PF12391	Protocatechuate 3,4-dioxygenase beta subunit N terminal
BJD12_14575	PF00775	Dioxygenase
BJD12_14580	PF00206	Lyase
BJD12_14580	PF10397	Adenylosuccinate lyase C-terminus
BJD12_14585	PF00561	alpha/beta hydrolase fold
BJD12_14590	PF02627	Carboxymuconolactone decarboxylase family
BJD12_14600	PF01614	Bacterial transcriptional regulator
BJD12_14600	PF09339	IclR helix-turn-helix domain
BJD12_14605	PF01163	RIO1 family
BJD12_14610	PF07859	alpha/beta hydrolase fold
BJD12_14615	PF10677	BJD12_14615
BJD12_14620	PF01134	Glucose inhibited division protein A
BJD12_14620	PF13932	GidA associated domain 3
BJD12_14630	PF00291	Pyridoxal-phosphate dependent enzyme
BJD12_14635	PF02698	DUF218 domain
BJD12_14640	PF12680	SnoaL-like domain
BJD12_14645	PF05118	Aspartyl/Asparaginyl beta-hydroxylase
BJD12_14650	PF08241	Methyltransferase domain
BJD12_14655	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_14660	PF12697	Alpha/beta hydrolase family
BJD12_14670	PF00155	Aminotransferase class I and II
BJD12_14675	PF04055	Radical SAM superfamily
BJD12_14675	PF06968	Biotin and Thiamin Synthesis associated domain
BJD12_14680	PF00156	Phosphoribosyl transferase domain
BJD12_14685	PF01040	UbiA prenyltransferase family
BJD12_14695	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_14695	PF03466	LysR substrate binding domain
BJD12_14700	PF01810	BJD12_14700
BJD12_14705	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_14705	PF08447	PAS fold
BJD12_14715	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
BJD12_14720	PF00924	Mechanosensitive ion channel
BJD12_14720	PF12607	BJD12_14720
BJD12_14725	PF00884	Sulfatase
BJD12_14735	PF03109	BJD12_14735
BJD12_14740	PF05661	BJD12_14740
BJD12_14745	PF00990	GGDEF domain
BJD12_14750	PF00534	Glycosyl transferases group 1
BJD12_14750	PF08323	Starch synthase catalytic domain
BJD12_14755	PF00128	Alpha amylase, catalytic domain
BJD12_14755	PF02806	Alpha amylase, C-terminal all-beta domain
BJD12_14755	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
BJD12_14760	PF00128	Alpha amylase, catalytic domain
BJD12_14760	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
BJD12_14760	PF11941	Domain of unknown function (DUF3459)
BJD12_14765	PF02446	4-alpha-glucanotransferase
BJD12_14770	PF00128	Alpha amylase, catalytic domain
BJD12_14770	PF11941	Domain of unknown function (DUF3459)
BJD12_14775	PF11154	BJD12_14775
BJD12_14780	PF00128	Alpha amylase, catalytic domain
BJD12_14780	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
BJD12_14785	PF13460	NADH(P)-binding
BJD12_14790	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_14800	PF00890	FAD binding domain
BJD12_14800	PF13454	FAD-NAD(P)-binding
BJD12_14805	PF06903	BJD12_14805
BJD12_14810	PF02321	Outer membrane efflux protein
BJD12_14815	PF00440	Bacterial regulatory proteins, tetR family
BJD12_14820	PF16576	BJD12_14820
BJD12_14825	PF00873	AcrB/AcrD/AcrF family
BJD12_14830	PF00106	short chain dehydrogenase
BJD12_14835	PF00106	short chain dehydrogenase
BJD12_14840	PF01638	HxlR-like helix-turn-helix
BJD12_14850	PF00270	DEAD/DEAH box helicase
BJD12_14850	PF00271	Helicase conserved C-terminal domain
BJD12_14865	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BJD12_14865	PF00364	Biotin-requiring enzyme
BJD12_14865	PF02817	e3 binding domain
BJD12_14870	PF07653	Variant SH3 domain
BJD12_14875	PF02779	Transketolase, pyrimidine binding domain
BJD12_14875	PF02780	Transketolase, C-terminal domain
BJD12_14880	PF00676	Dehydrogenase E1 component
BJD12_14885	PF00932	Lamin Tail Domain
BJD12_14885	PF03160	Calx-beta domain
BJD12_14885	PF03372	Endonuclease/Exonuclease/phosphatase family
BJD12_14890	PF03301	Tryptophan 2,3-dioxygenase
BJD12_14895	PF00854	POT family
BJD12_14900	PF13899	Thioredoxin-like
BJD12_14905	PF12802	MarR family
BJD12_14910	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BJD12_14910	PF14696	Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal
BJD12_14915	PF04480	Protein of unknown function (DUF559)
BJD12_14935	PF03334	BJD12_14935
BJD12_14940	PF04066	BJD12_14940
BJD12_14945	PF01899	BJD12_14945
BJD12_14950	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
BJD12_14955	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
BJD12_14960	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
BJD12_14960	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
BJD12_14960	PF04039	BJD12_14960
BJD12_14960	PF13244	BJD12_14960
BJD12_14965	PF01370	NAD dependent epimerase/dehydratase family
BJD12_14970	PF06127	BJD12_14970
BJD12_14975	PF01447	Thermolysin metallopeptidase, catalytic domain
BJD12_14975	PF02868	Thermolysin metallopeptidase, alpha-helical domain
BJD12_14975	PF07504	Fungalysin/Thermolysin Propeptide Motif
BJD12_14980	PF00877	NlpC/P60 family
BJD12_14980	PF01471	Putative peptidoglycan binding domain
BJD12_14990	PF01259	SAICAR synthetase
BJD12_14995	PF00226	DnaJ domain
BJD12_15010	PF00834	Ribulose-phosphate 3 epimerase family
BJD12_15015	PF00583	Acetyltransferase (GNAT) family
BJD12_15020	PF00781	Diacylglycerol kinase catalytic domain
BJD12_15025	PF00425	chorismate binding enzyme
BJD12_15025	PF04715	Anthranilate synthase component I, N terminal region
BJD12_15030	PF01212	Beta-eliminating lyase
BJD12_15035	PF04402	Protein of unknown function (DUF541)
BJD12_15040	PF00117	Glutamine amidotransferase class-I
BJD12_15045	PF01613	Flavin reductase like domain
BJD12_15050	PF00591	Glycosyl transferase family, a/b domain
BJD12_15050	PF02885	Glycosyl transferase family, helical bundle domain
BJD12_15055	PF00218	Indole-3-glycerol phosphate synthase
BJD12_15060	PF12710	haloacid dehalogenase-like hydrolase
BJD12_15065	PF00027	Cyclic nucleotide-binding domain
BJD12_15065	PF00325	Bacterial regulatory proteins, crp family
BJD12_15070	PF02675	S-adenosylmethionine decarboxylase
BJD12_15075	PF00893	Small Multidrug Resistance protein
BJD12_15080	PF03232	BJD12_15080
BJD12_15085	PF00572	Ribosomal protein L13
BJD12_15090	PF00380	Ribosomal protein S9/S16
BJD12_15105	PF00293	NUDIX domain
BJD12_15110	PF04324	BFD-like [2Fe-2S] binding domain
BJD12_15115	PF00210	Ferritin-like domain
BJD12_15120	PF00072	Response regulator receiver domain
BJD12_15120	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_15120	PF01627	Hpt domain
BJD12_15120	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_15125	PF00072	Response regulator receiver domain
BJD12_15125	PF00563	EAL domain
BJD12_15125	PF00990	GGDEF domain
BJD12_15130	PF13548	BJD12_15130
BJD12_15140	PF04519	BJD12_15140
BJD12_15145	PF01521	Iron-sulphur cluster biosynthesis
BJD12_15150	PF00293	NUDIX domain
BJD12_15150	PF09296	NADH pyrophosphatase-like rudimentary NUDIX domain
BJD12_15150	PF09297	NADH pyrophosphatase zinc ribbon domain
BJD12_15160	PF10825	BJD12_15160
BJD12_15165	PF04505	BJD12_15165
BJD12_15170	PF01553	Acyltransferase
BJD12_15170	PF07690	Major Facilitator Superfamily
BJD12_15175	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_15175	PF03466	LysR substrate binding domain
BJD12_15180	PF07690	Major Facilitator Superfamily
BJD12_15185	PF12805	BJD12_15185
BJD12_15185	PF13515	BJD12_15185
BJD12_15190	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
BJD12_15190	PF02843	Phosphoribosylglycinamide synthetase, C domain
BJD12_15190	PF02844	Phosphoribosylglycinamide synthetase, N domain
BJD12_15200	PF01808	AICARFT/IMPCHase bienzyme
BJD12_15200	PF02142	MGS-like domain
BJD12_15205	PF01066	CDP-alcohol phosphatidyltransferase
BJD12_15210	PF12146	Putative lysophospholipase
BJD12_15210	PF12147	BJD12_15210
BJD12_15215	PF00782	Dual specificity phosphatase, catalytic domain
BJD12_15230	PF01066	CDP-alcohol phosphatidyltransferase
BJD12_15235	PF01553	Acyltransferase
BJD12_15240	PF01148	Cytidylyltransferase family
BJD12_15245	PF00818	BJD12_15245
BJD12_15250	PF02954	Bacterial regulatory protein, Fis family
BJD12_15255	PF11906	BJD12_15255
BJD12_15260	PF01381	Helix-turn-helix
BJD12_15270	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
BJD12_15285	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
BJD12_15285	PF02785	Biotin carboxylase C-terminal domain
BJD12_15285	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BJD12_15295	PF00364	Biotin-requiring enzyme
BJD12_15300	PF01220	Dehydroquinase class II
BJD12_15305	PF02683	BJD12_15305
BJD12_15305	PF11412	Disulphide bond corrector protein DsbC
BJD12_15305	PF13899	Thioredoxin-like
BJD12_15310	PF03091	CutA1 divalent ion tolerance protein
BJD12_15315	PF04231	Endonuclease I
BJD12_15315	PF13205	Bacterial Ig-like domain
BJD12_15320	PF00166	Chaperonin 10 Kd subunit
BJD12_15325	PF00118	TCP-1/cpn60 chaperonin family
BJD12_15340	PF00593	TonB dependent receptor
BJD12_15340	PF07715	TonB-dependent Receptor Plug Domain
BJD12_15345	PF00793	DAHP synthetase I family
BJD12_15350	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
BJD12_15350	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
BJD12_15365	PF08450	SMP-30/Gluconolaconase/LRE-like region
BJD12_15375	PF03710	Glutamate-ammonia ligase adenylyltransferase
BJD12_15375	PF08335	GlnD PII-uridylyltransferase
BJD12_15385	PF04126	Cyclophilin-like
BJD12_15390	PF01738	Dienelactone hydrolase family
BJD12_15395	PF02592	BJD12_15395
BJD12_15410	PF09916	BJD12_15410
BJD12_15415	PF06258	BJD12_15415
BJD12_15420	PF00881	Nitroreductase family
BJD12_15425	PF04264	YceI-like domain
BJD12_15430	PF04954	Siderophore-interacting protein
BJD12_15430	PF08021	Siderophore-interacting FAD-binding domain
BJD12_15435	PF03551	Transcriptional regulator PadR-like family
BJD12_15440	PF16957	BJD12_15440
BJD12_15445	PF06857	BJD12_15445
BJD12_15450	PF01039	Carboxyl transferase domain
BJD12_15455	PF06833	Malonate decarboxylase gamma subunit (MdcE)
BJD12_15460	PF10620	BJD12_15460
BJD12_15465	PF01874	ATP:dephospho-CoA triphosphoribosyl transferase
BJD12_15470	PF00698	Acyl transferase domain
BJD12_15475	PF03600	Citrate transporter
BJD12_15475	PF07158	BJD12_15475
BJD12_15480	PF00392	Bacterial regulatory proteins, gntR family
BJD12_15480	PF07729	FCD domain
BJD12_15490	PF13419	Haloacid dehalogenase-like hydrolase
BJD12_15495	PF01740	STAS domain
BJD12_15500	PF13581	Histidine kinase-like ATPase domain
BJD12_15505	PF00672	HAMP domain
BJD12_15505	PF02743	Cache domain
BJD12_15505	PF07228	Stage II sporulation protein E (SpoIIE)
BJD12_15515	PF01764	Lipase (class 3)
BJD12_15520	PF07745	Glycosyl hydrolase family 53
BJD12_15525	PF00456	Transketolase, thiamine diphosphate binding domain
BJD12_15530	PF00145	C-5 cytosine-specific DNA methylase
BJD12_15535	PF00145	C-5 cytosine-specific DNA methylase
BJD12_15540	PF13391	BJD12_15540
BJD12_15555	PF01527	Transposase
BJD12_15570	PF00665	Integrase core domain
BJD12_15570	PF13276	BJD12_15570
BJD12_15575	PF01527	Transposase
BJD12_15590	PF01797	Transposase IS200 like
BJD12_15595	PF01527	Transposase
BJD12_15600	PF00665	Integrase core domain
BJD12_15600	PF13276	BJD12_15600
BJD12_15630	PF08845	BJD12_15630
BJD12_15650	PF01471	Putative peptidoglycan binding domain
BJD12_15650	PF01551	Peptidase family M23
BJD12_15665	PF00106	short chain dehydrogenase
BJD12_15665	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_15675	PF13409	Glutathione S-transferase, N-terminal domain
BJD12_15675	PF13410	Glutathione S-transferase, C-terminal domain
BJD12_15680	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BJD12_15690	PF13548	BJD12_15690
BJD12_15695	PF02517	CAAX protease self-immunity
BJD12_15700	PF12802	MarR family
BJD12_15705	PF01433	Peptidase family M1
BJD12_15710	PF00756	Putative esterase
BJD12_15715	PF05708	Orthopoxvirus protein of unknown function (DUF830)
BJD12_15720	PF12823	BJD12_15720
BJD12_15725	PF00326	Prolyl oligopeptidase family
BJD12_15730	PF00326	Prolyl oligopeptidase family
BJD12_15730	PF00930	Dipeptidyl peptidase IV (DPP IV) N-terminal region
BJD12_15735	PF07759	BJD12_15735
BJD12_15745	PF00990	GGDEF domain
BJD12_15750	PF02082	Transcriptional regulator
BJD12_15755	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BJD12_15775	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
BJD12_15780	PF00892	EamA-like transporter family
BJD12_15795	PF00324	Amino acid permease
BJD12_15800	PF01544	CorA-like Mg2+ transporter protein
BJD12_15815	PF01436	NHL repeat
BJD12_15820	PF01204	Trehalase
BJD12_15825	PF01904	Protein of unknown function DUF72
BJD12_15830	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
BJD12_15830	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
BJD12_15850	PF01590	GAF domain
BJD12_15855	PF00675	Insulinase (Peptidase family M16)
BJD12_15855	PF05193	Peptidase M16 inactive domain
BJD12_15860	PF00990	GGDEF domain
BJD12_15860	PF01590	GAF domain
BJD12_15860	PF08447	PAS fold
BJD12_15860	PF08448	PAS fold
BJD12_15860	PF13426	PAS domain
BJD12_15865	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_15865	PF00672	HAMP domain
BJD12_15865	PF17200	BJD12_15865
BJD12_15870	PF00150	Cellulase (glycosyl hydrolase family 5)
BJD12_15870	PF00553	Cellulose binding domain
BJD12_15875	PF00916	BJD12_15875
BJD12_15875	PF01740	STAS domain
BJD12_15880	PF00990	GGDEF domain
BJD12_15890	PF02225	PA domain
BJD12_15890	PF04389	Peptidase family M28
BJD12_15920	PF13632	Glycosyl transferase family group 2
BJD12_15925	PF02230	Phospholipase/Carboxylesterase
BJD12_15930	PF06580	BJD12_15930
BJD12_15935	PF00072	Response regulator receiver domain
BJD12_15935	PF04397	LytTr DNA-binding domain
BJD12_15940	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
BJD12_15940	PF03900	Porphobilinogen deaminase, C-terminal domain
BJD12_15945	PF04338	Protein of unknown function, DUF481
BJD12_15950	PF08279	HTH domain
BJD12_15950	PF13280	BJD12_15950
BJD12_15960	PF08212	Lipocalin-like domain
BJD12_15970	PF00326	Prolyl oligopeptidase family
BJD12_15970	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
BJD12_15985	PF00155	Aminotransferase class I and II
BJD12_15995	PF00326	Prolyl oligopeptidase family
BJD12_15995	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
BJD12_16000	PF04304	BJD12_16000
BJD12_16005	PF13627	BJD12_16005
BJD12_16010	PF01678	Diaminopimelate epimerase
BJD12_16015	PF04340	Protein of unknown function, DUF484
BJD12_16020	PF00589	Phage integrase family
BJD12_16020	PF02899	Phage integrase, N-terminal SAM-like domain
BJD12_16025	PF06718	BJD12_16025
BJD12_16030	PF00227	Proteasome subunit
BJD12_16035	PF00004	ATPase family associated with various cellular activities (AAA)
BJD12_16035	PF07724	AAA domain (Cdc48 subfamily)
BJD12_16035	PF10431	C-terminal, D2-small domain, of ClpB protein
BJD12_16045	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BJD12_16050	PF13673	Acetyltransferase (GNAT) domain
BJD12_16055	PF16576	BJD12_16055
BJD12_16060	PF07690	Major Facilitator Superfamily
BJD12_16065	PF01209	ubiE/COQ5 methyltransferase family
BJD12_16070	PF00990	GGDEF domain
BJD12_16075	PF01433	Peptidase family M1
BJD12_16075	PF09127	Leukotriene A4 hydrolase, C-terminal
BJD12_16085	PF00702	haloacid dehalogenase-like hydrolase
BJD12_16090	PF13360	PQQ-like domain
BJD12_16090	PF13570	PQQ-like domain
BJD12_16095	PF00497	Bacterial extracellular solute-binding proteins, family 3
BJD12_16095	PF12796	Ankyrin repeats (3 copies)
BJD12_16100	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
BJD12_16105	PF10282	Lactonase, 7-bladed beta-propeller
BJD12_16110	PF00107	Zinc-binding dehydrogenase
BJD12_16110	PF08240	Alcohol dehydrogenase GroES-like domain
BJD12_16115	PF00593	TonB dependent receptor
BJD12_16115	PF07715	TonB-dependent Receptor Plug Domain
BJD12_16120	PF00158	Sigma-54 interaction domain
BJD12_16120	PF01590	GAF domain
BJD12_16120	PF02954	Bacterial regulatory protein, Fis family
BJD12_16125	PF00294	pfkB family carbohydrate kinase
BJD12_16130	PF06723	MreB/Mbl protein
BJD12_16135	PF04085	rod shape-determining protein MreC
BJD12_16140	PF04093	BJD12_16140
BJD12_16145	PF00905	Penicillin binding protein transpeptidase domain
BJD12_16145	PF03717	Penicillin-binding Protein dimerisation domain
BJD12_16150	PF01098	BJD12_16150
BJD12_16155	PF00295	Glycosyl hydrolases family 28
BJD12_16160	PF13406	Transglycosylase SLT domain
BJD12_16165	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
BJD12_16165	PF05036	Sporulation related domain
BJD12_16170	PF00768	D-alanyl-D-alanine carboxypeptidase
BJD12_16170	PF07943	Penicillin-binding protein 5, C-terminal domain
BJD12_16175	PF09982	Uncharacterized protein conserved in bacteria (DUF2219)
BJD12_16180	PF04359	Protein of unknown function (DUF493)
BJD12_16185	PF03099	Biotin/lipoate A/B protein ligase family
BJD12_16190	PF04055	Radical SAM superfamily
BJD12_16190	PF16881	BJD12_16190
BJD12_16195	PF00595	PDZ domain (Also known as DHR or GLGF)
BJD12_16195	PF03572	Peptidase family S41
BJD12_16195	PF11818	BJD12_16195
BJD12_16200	PF01925	BJD12_16200
BJD12_16205	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_16205	PF03466	LysR substrate binding domain
BJD12_16210	PF03372	Endonuclease/Exonuclease/phosphatase family
BJD12_16215	PF00293	NUDIX domain
BJD12_16215	PF01467	Cytidylyltransferase
BJD12_16220	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
BJD12_16230	PF01555	DNA methylase
BJD12_16235	PF10001	BJD12_16235
BJD12_16240	PF05433	BJD12_16240
BJD12_16250	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
BJD12_16250	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BJD12_16255	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BJD12_16255	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BJD12_16260	PF04972	BON domain
BJD12_16265	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_16265	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_16265	PF05227	CHASE3 domain
BJD12_16265	PF13188	PAS domain
BJD12_16270	PF00072	Response regulator receiver domain
BJD12_16275	PF00072	Response regulator receiver domain
BJD12_16275	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_16280	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
BJD12_16285	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_16290	PF02636	Putative S-adenosyl-L-methionine-dependent methyltransferase
BJD12_16300	PF00593	TonB dependent receptor
BJD12_16300	PF07715	TonB-dependent Receptor Plug Domain
BJD12_16305	PF13640	2OG-Fe(II) oxygenase superfamily
BJD12_16315	PF00593	TonB dependent receptor
BJD12_16315	PF07715	TonB-dependent Receptor Plug Domain
BJD12_16320	PF11356	Type IV pilus biogenesis
BJD12_16320	PF13180	PDZ domain
BJD12_16325	PF00263	BJD12_16325
BJD12_16325	PF03958	Bacterial type II/III secretion system short domain
BJD12_16330	PF00437	Type II/IV secretion system protein
BJD12_16330	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
BJD12_16335	PF00482	Type II secretion system (T2SS), protein F
BJD12_16340	PF07963	Prokaryotic N-terminal methylation motif
BJD12_16340	PF08334	Type II secretion system (T2SS), protein G
BJD12_16345	PF12019	Type II transport protein GspH
BJD12_16350	PF02501	Type II secretion system (T2SS), protein I
BJD12_16350	PF07963	Prokaryotic N-terminal methylation motif
BJD12_16355	PF07963	Prokaryotic N-terminal methylation motif
BJD12_16355	PF11612	Type II secretion system (T2SS), protein J
BJD12_16360	PF03934	Type II secretion system (T2SS), protein K
BJD12_16365	PF05134	Type II secretion system (T2SS), protein L
BJD12_16365	PF12693	GspL periplasmic domain
BJD12_16370	PF04612	Type II secretion system (T2SS), protein M
BJD12_16375	PF01203	BJD12_16375
BJD12_16380	PF00392	Bacterial regulatory proteins, gntR family
BJD12_16380	PF07702	UTRA domain
BJD12_16385	PF07690	Major Facilitator Superfamily
BJD12_16390	PF00356	Bacterial regulatory proteins, lacI family
BJD12_16390	PF13377	Periplasmic binding protein-like domain
BJD12_16395	PF01380	SIS domain
BJD12_16400	PF01979	Amidohydrolase family
BJD12_16405	PF03572	Peptidase family S41
BJD12_16410	PF00593	TonB dependent receptor
BJD12_16410	PF07715	TonB-dependent Receptor Plug Domain
BJD12_16415	PF01743	Poly A polymerase head domain
BJD12_16415	PF01966	HD domain
BJD12_16415	PF12627	Probable RNA and SrmB- binding site of polymerase A
BJD12_16430	PF00133	tRNA synthetases class I (I, L, M and V)
BJD12_16430	PF08264	Anticodon-binding domain of tRNA
BJD12_16430	PF10458	Valyl tRNA synthetase tRNA binding arm
BJD12_16435	PF04364	DNA polymerase III chi subunit, HolC
BJD12_16445	PF00883	Cytosol aminopeptidase family, catalytic domain
BJD12_16445	PF02789	Cytosol aminopeptidase family, N-terminal domain
BJD12_16450	PF03739	BJD12_16450
BJD12_16455	PF03739	BJD12_16455
BJD12_16465	PF06271	BJD12_16465
BJD12_16470	PF00589	Phage integrase family
BJD12_16470	PF02899	Phage integrase, N-terminal SAM-like domain
BJD12_16475	PF10411	Disulfide bond isomerase protein N-terminus
BJD12_16475	PF13098	Thioredoxin-like domain
BJD12_16485	PF02769	AIR synthase related protein, C-terminal domain
BJD12_16485	PF13507	CobB/CobQ-like glutamine amidotransferase domain
BJD12_16490	PF05658	Head domain of trimeric autotransporter adhesin
BJD12_16495	PF05658	Head domain of trimeric autotransporter adhesin
BJD12_16495	PF05662	Coiled stalk of trimeric autotransporter adhesin
BJD12_16495	PF13018	BJD12_16495
BJD12_16500	PF00082	Subtilase family
BJD12_16505	PF00082	Subtilase family
BJD12_16505	PF04151	Bacterial pre-peptidase C-terminal domain
BJD12_16510	PF00437	Type II/IV secretion system protein
BJD12_16510	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
BJD12_16515	PF00482	Type II secretion system (T2SS), protein F
BJD12_16520	PF08334	Type II secretion system (T2SS), protein G
BJD12_16525	PF12019	Type II transport protein GspH
BJD12_16530	PF07963	Prokaryotic N-terminal methylation motif
BJD12_16540	PF03934	Type II secretion system (T2SS), protein K
BJD12_16545	PF05137	BJD12_16545
BJD12_16550	PF10741	BJD12_16550
BJD12_16560	PF00263	BJD12_16560
BJD12_16560	PF03958	Bacterial type II/III secretion system short domain
BJD12_16580	PF00392	Bacterial regulatory proteins, gntR family
BJD12_16580	PF07702	UTRA domain
BJD12_16585	PF04973	BJD12_16585
BJD12_16590	PF00593	TonB dependent receptor
BJD12_16590	PF07715	TonB-dependent Receptor Plug Domain
BJD12_16595	PF01636	Phosphotransferase enzyme family
BJD12_16600	PF00535	Glycosyl transferase family 2
BJD12_16610	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
BJD12_16610	PF13632	Glycosyl transferase family group 2
BJD12_16625	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
BJD12_16640	PF00535	Glycosyl transferase family 2
BJD12_16640	PF03552	Cellulose synthase
BJD12_16640	PF07238	PilZ domain
BJD12_16645	PF03170	Bacterial cellulose synthase subunit
BJD12_16650	PF01270	Glycosyl hydrolases family 8
BJD12_16655	PF05420	BJD12_16655
BJD12_16655	PF13432	Tetratricopeptide repeat
BJD12_16655	PF14559	Tetratricopeptide repeat
BJD12_16660	PF02225	PA domain
BJD12_16670	PF03960	ArsC family
BJD12_16675	PF01327	Polypeptide deformylase
BJD12_16680	PF00005	ABC transporter
BJD12_16680	PF12848	ABC transporter
BJD12_16685	PF11776	Domain of unknown function (DUF3315)
BJD12_16690	PF00464	Serine hydroxymethyltransferase
BJD12_16695	PF03477	ATP cone domain
BJD12_16700	PF13673	Acetyltransferase (GNAT) domain
BJD12_16705	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BJD12_16705	PF01872	RibD C-terminal domain
BJD12_16720	PF00677	Lumazine binding domain
BJD12_16725	PF00925	GTP cyclohydrolase II
BJD12_16725	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
BJD12_16730	PF00885	6,7-dimethyl-8-ribityllumazine synthase
BJD12_16735	PF01029	NusB family
BJD12_16740	PF00586	AIR synthase related protein, N-terminal domain
BJD12_16740	PF02769	AIR synthase related protein, C-terminal domain
BJD12_16750	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
BJD12_16750	PF08530	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BJD12_16760	PF09604	BJD12_16760
BJD12_16765	PF03814	BJD12_16765
BJD12_16770	PF00122	E1-E2 ATPase
BJD12_16770	PF00702	haloacid dehalogenase-like hydrolase
BJD12_16775	PF02669	BJD12_16775
BJD12_16780	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_16780	PF00582	Universal stress protein family
BJD12_16780	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_16780	PF02702	Osmosensitive K+ channel His kinase sensor domain
BJD12_16780	PF13493	Domain of unknown function (DUF4118)
BJD12_16785	PF00072	Response regulator receiver domain
BJD12_16785	PF00486	Transcriptional regulatory protein, C terminal
BJD12_16790	PF00326	Prolyl oligopeptidase family
BJD12_16790	PF07676	WD40-like Beta Propeller Repeat
BJD12_16795	PF01565	FAD binding domain
BJD12_16795	PF02913	FAD linked oxidases, C-terminal domain
BJD12_16800	PF04307	BJD12_16800
BJD12_16805	PF02021	Uncharacterised protein family UPF0102
BJD12_16810	PF04348	LppC putative lipoprotein
BJD12_16815	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BJD12_16825	PF01845	CcdB protein
BJD12_16830	PF07362	Post-segregation antitoxin CcdA
BJD12_16835	PF05742	BJD12_16835
BJD12_16840	PF02381	MraZ protein
BJD12_16845	PF01795	MraW methylase family
BJD12_16850	PF04999	BJD12_16850
BJD12_16855	PF00905	Penicillin binding protein transpeptidase domain
BJD12_16855	PF03717	Penicillin-binding Protein dimerisation domain
BJD12_16860	PF01225	Mur ligase family, catalytic domain
BJD12_16860	PF02875	Mur ligase family, glutamate ligase domain
BJD12_16860	PF08245	Mur ligase middle domain
BJD12_16865	PF01225	Mur ligase family, catalytic domain
BJD12_16865	PF02875	Mur ligase family, glutamate ligase domain
BJD12_16865	PF08245	Mur ligase middle domain
BJD12_16870	PF00953	Glycosyl transferase family 4
BJD12_16875	PF01098	BJD12_16875
BJD12_16880	PF03033	Glycosyltransferase family 28 N-terminal domain
BJD12_16880	PF04101	Glycosyltransferase family 28 C-terminal domain
BJD12_16885	PF01225	Mur ligase family, catalytic domain
BJD12_16885	PF02875	Mur ligase family, glutamate ligase domain
BJD12_16885	PF08245	Mur ligase middle domain
BJD12_16890	PF01820	D-ala D-ala ligase N-terminus
BJD12_16890	PF07478	D-ala D-ala ligase C-terminus
BJD12_16895	PF03799	Cell division protein FtsQ
BJD12_16895	PF08478	POTRA domain, FtsQ-type
BJD12_16900	PF02491	SHS2 domain inserted in FTSA
BJD12_16900	PF14450	Cell division protein FtsA
BJD12_16905	PF00091	Tubulin/FtsZ family, GTPase domain
BJD12_16905	PF12327	FtsZ family, C-terminal domain
BJD12_16910	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
BJD12_16915	PF05258	BJD12_16915
BJD12_16920	PF01551	Peptidase family M23
BJD12_16925	PF01043	SecA preprotein cross-linking domain
BJD12_16925	PF02810	SEC-C motif
BJD12_16925	PF07516	SecA Wing and Scaffold domain
BJD12_16925	PF07517	SecA DEAD-like domain
BJD12_16930	PF03797	Autotransporter beta-domain
BJD12_16930	PF13018	BJD12_16930
BJD12_16940	PF00293	NUDIX domain
BJD12_16940	PF02581	Thiamine monophosphate synthase/TENI
BJD12_16945	PF13671	AAA domain
BJD12_16955	PF02219	Methylenetetrahydrofolate reductase
BJD12_16965	PF08240	Alcohol dehydrogenase GroES-like domain
BJD12_16965	PF13602	Zinc-binding dehydrogenase
BJD12_16980	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BJD12_16990	PF00300	Histidine phosphatase superfamily (branch 1)
BJD12_16995	PF00128	Alpha amylase, catalytic domain
BJD12_17005	PF09831	BJD12_17005
BJD12_17010	PF11539	Protein of unknown function (DUF3228)
BJD12_17020	PF00685	Sulfotransferase domain
BJD12_17025	PF13649	Methyltransferase domain
BJD12_17030	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
BJD12_17030	PF05221	S-adenosyl-L-homocysteine hydrolase
BJD12_17035	PF00326	Prolyl oligopeptidase family
BJD12_17040	PF00311	Phosphoenolpyruvate carboxylase
BJD12_17045	PF00440	Bacterial regulatory proteins, tetR family
BJD12_17050	PF13387	BJD12_17050
BJD12_17060	PF00691	OmpA family
BJD12_17070	PF00593	TonB dependent receptor
BJD12_17070	PF07715	TonB-dependent Receptor Plug Domain
BJD12_17075	PF00328	Histidine phosphatase superfamily (branch 2)
BJD12_17080	PF00438	S-adenosylmethionine synthetase, N-terminal domain
BJD12_17080	PF02772	S-adenosylmethionine synthetase, central domain
BJD12_17080	PF02773	S-adenosylmethionine synthetase, C-terminal domain
BJD12_17085	PF04307	BJD12_17085
BJD12_17090	PF01207	Dihydrouridine synthase (Dus)
BJD12_17095	PF16233	BJD12_17095
BJD12_17100	PF00294	pfkB family carbohydrate kinase
BJD12_17105	PF01773	Na+ dependent nucleoside transporter N-terminus
BJD12_17105	PF07662	Na+ dependent nucleoside transporter C-terminus
BJD12_17105	PF07670	Nucleoside recognition
BJD12_17110	PF00248	Aldo/keto reductase family
BJD12_17115	PF10636	Hemin uptake protein hemP
BJD12_17120	PF00593	TonB dependent receptor
BJD12_17120	PF07715	TonB-dependent Receptor Plug Domain
BJD12_17135	PF04342	BJD12_17135
BJD12_17140	PF00528	Binding-protein-dependent transport system inner membrane component
BJD12_17145	PF00005	ABC transporter
BJD12_17150	PF13379	NMT1-like family
BJD12_17155	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
BJD12_17160	PF02687	BJD12_17160
BJD12_17165	PF00005	ABC transporter
BJD12_17170	PF13472	GDSL-like Lipase/Acylhydrolase family
BJD12_17175	PF00072	Response regulator receiver domain
BJD12_17175	PF00486	Transcriptional regulatory protein, C terminal
BJD12_17180	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_17180	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_17185	PF13472	GDSL-like Lipase/Acylhydrolase family
BJD12_17190	PF01219	Prokaryotic diacylglycerol kinase
BJD12_17200	PF04536	TLP18
BJD12_17205	PF04536	TLP18
BJD12_17210	PF01790	BJD12_17210
BJD12_17215	PF00303	Thymidylate synthase
BJD12_17225	PF00186	Dihydrofolate reductase
BJD12_17230	PF00149	Calcineurin-like phosphoesterase
BJD12_17235	PF04379	Protein of unknown function (DUF525)
BJD12_17240	PF00398	Ribosomal RNA adenine dimethylase
BJD12_17245	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
BJD12_17250	PF00639	PPIC-type PPIASE domain
BJD12_17250	PF09312	SurA N-terminal domain
BJD12_17250	PF13616	PPIC-type PPIASE domain
BJD12_17255	PF03968	OstA-like protein
BJD12_17255	PF04453	Organic solvent tolerance protein
BJD12_17265	PF01923	Cobalamin adenosyltransferase
BJD12_17275	PF01494	FAD binding domain
BJD12_17280	PF01494	FAD binding domain
BJD12_17285	PF12697	Alpha/beta hydrolase family
BJD12_17290	PF13577	SnoaL-like domain
BJD12_17295	PF13557	BJD12_17295
BJD12_17300	PF00392	Bacterial regulatory proteins, gntR family
BJD12_17300	PF07729	FCD domain
BJD12_17305	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
BJD12_17310	PF07746	Aromatic-ring-opening dioxygenase LigAB, LigA subunit
BJD12_17315	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_17315	PF03466	LysR substrate binding domain
BJD12_17320	PF00501	AMP-binding enzyme
BJD12_17320	PF13193	AMP-binding enzyme C-terminal domain
BJD12_17325	PF00171	Aldehyde dehydrogenase family
BJD12_17330	PF00378	Enoyl-CoA hydratase/isomerase family
BJD12_17335	PF12802	MarR family
BJD12_17340	PF13202	EF hand
BJD12_17350	PF08450	SMP-30/Gluconolaconase/LRE-like region
BJD12_17355	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BJD12_17360	PF01728	FtsJ-like methyltransferase
BJD12_17365	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BJD12_17380	PF00892	EamA-like transporter family
BJD12_17385	PF00749	tRNA synthetases class I (E and Q), catalytic domain
BJD12_17385	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
BJD12_17390	PF13409	Glutathione S-transferase, N-terminal domain
BJD12_17395	PF09413	Domain of unknown function (DUF2007)
BJD12_17400	PF00072	Response regulator receiver domain
BJD12_17405	PF00072	Response regulator receiver domain
BJD12_17405	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_17405	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_17405	PF05227	CHASE3 domain
BJD12_17410	PF00196	Bacterial regulatory proteins, luxR family
BJD12_17415	PF08332	Calcium/calmodulin dependent protein kinase II Association
BJD12_17420	PF01625	Peptide methionine sulfoxide reductase
BJD12_17425	PF01965	DJ-1/PfpI family
BJD12_17430	PF00923	Transaldolase
BJD12_17435	PF01272	Transcription elongation factor, GreA/GreB, C-term
BJD12_17435	PF14760	Rnk N-terminus
BJD12_17440	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_17440	PF03466	LysR substrate binding domain
BJD12_17445	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BJD12_17445	PF13192	Thioredoxin domain
BJD12_17450	PF00578	AhpC/TSA family
BJD12_17450	PF10417	C-terminal domain of 1-Cys peroxiredoxin
BJD12_17455	PF05175	Methyltransferase small domain
BJD12_17460	PF00561	alpha/beta hydrolase fold
BJD12_17465	PF05013	N-formylglutamate amidohydrolase
BJD12_17470	PF00293	NUDIX domain
BJD12_17475	PF01367	5'-3' exonuclease, C-terminal SAM fold
BJD12_17475	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
BJD12_17480	PF00881	Nitroreductase family
BJD12_17490	PF07793	BJD12_17490
BJD12_17495	PF12146	Putative lysophospholipase
BJD12_17500	PF00440	Bacterial regulatory proteins, tetR family
BJD12_17500	PF13305	WHG domain
BJD12_17505	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
BJD12_17505	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
BJD12_17510	PF11304	BJD12_17510
BJD12_17520	PF04542	Sigma-70 region 2
BJD12_17520	PF08281	Sigma-70, region 4
BJD12_17525	PF12769	Domain of unknown function (DUF3814)
BJD12_17530	PF02233	NAD(P) transhydrogenase beta subunit
BJD12_17545	PF01883	Domain of unknown function DUF59
BJD12_17550	PF01063	Aminotransferase class IV
BJD12_17555	PF00082	Subtilase family
BJD12_17555	PF04151	Bacterial pre-peptidase C-terminal domain
BJD12_17560	PF00082	Subtilase family
BJD12_17565	PF00082	Subtilase family
BJD12_17565	PF04151	Bacterial pre-peptidase C-terminal domain
BJD12_17575	PF04073	Aminoacyl-tRNA editing domain
BJD12_17580	PF00710	Asparaginase
BJD12_17585	PF09842	BJD12_17585
BJD12_17590	PF03358	NADPH-dependent FMN reductase
BJD12_17595	PF03631	BJD12_17595
BJD12_17600	PF00578	AhpC/TSA family
BJD12_17605	PF00708	Acylphosphatase
BJD12_17615	PF03976	Polyphosphate kinase 2 (PPK2)
BJD12_17620	PF00994	Probable molybdopterin binding domain
BJD12_17625	PF13844	Glycosyl transferase family 41
BJD12_17630	PF00472	RF-1 domain
BJD12_17630	PF03462	PCRF domain
BJD12_17635	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
BJD12_17635	PF01488	Shikimate / quinate 5-dehydrogenase
BJD12_17635	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
BJD12_17640	PF13181	Tetratricopeptide repeat
BJD12_17640	PF13432	Tetratricopeptide repeat
BJD12_17640	PF14559	Tetratricopeptide repeat
BJD12_17645	PF03550	Outer membrane lipoprotein LolB
BJD12_17650	PF00288	GHMP kinases N terminal domain
BJD12_17650	PF08544	GHMP kinases C terminal
BJD12_17660	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
BJD12_17660	PF14572	Phosphoribosyl synthetase-associated domain
BJD12_17665	PF01386	Ribosomal L25p family
BJD12_17665	PF14693	Ribosomal protein TL5, C-terminal domain
BJD12_17670	PF01195	Peptidyl-tRNA hydrolase
BJD12_17675	PF01926	50S ribosome-binding GTPase
BJD12_17675	PF06071	Protein of unknown function (DUF933)
BJD12_17680	PF00589	Phage integrase family
BJD12_17680	PF13356	Domain of unknown function (DUF4102)
BJD12_17680	PF14659	Phage integrase, N-terminal SAM-like domain
BJD12_17685	PF02661	Fic/DOC family
BJD12_17695	PF04851	Type III restriction enzyme, res subunit
BJD12_17700	PF01555	DNA methylase
BJD12_17705	PF13245	Part of AAA domain
BJD12_17705	PF13361	UvrD-like helicase C-terminal domain
BJD12_17710	PF12834	BJD12_17710
BJD12_17710	PF12835	Integrase
BJD12_17735	PF00009	Elongation factor Tu GTP binding domain
BJD12_17735	PF03143	Elongation factor Tu C-terminal domain
BJD12_17735	PF03144	Elongation factor Tu domain 2
BJD12_17745	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
BJD12_17750	PF00467	KOW motif
BJD12_17750	PF02357	Transcription termination factor nusG
BJD12_17755	PF00298	Ribosomal protein L11, RNA binding domain
BJD12_17755	PF03946	Ribosomal protein L11, N-terminal domain
BJD12_17760	PF00687	Ribosomal protein L1p/L10e family
BJD12_17765	PF00466	Ribosomal protein L10
BJD12_17770	PF00542	Ribosomal protein L7/L12 C-terminal domain
BJD12_17770	PF16320	BJD12_17770
BJD12_17775	PF00562	RNA polymerase Rpb2, domain 6
BJD12_17775	PF04560	RNA polymerase Rpb2, domain 7
BJD12_17775	PF04561	RNA polymerase Rpb2, domain 2
BJD12_17775	PF04563	RNA polymerase beta subunit
BJD12_17775	PF04565	RNA polymerase Rpb2, domain 3
BJD12_17775	PF10385	RNA polymerase beta subunit external 1 domain
BJD12_17780	PF00623	RNA polymerase Rpb1, domain 2
BJD12_17780	PF04983	RNA polymerase Rpb1, domain 3
BJD12_17780	PF04997	RNA polymerase Rpb1, domain 1
BJD12_17780	PF04998	RNA polymerase Rpb1, domain 5
BJD12_17780	PF05000	RNA polymerase Rpb1, domain 4
BJD12_17785	PF00164	Ribosomal protein S12/S23
BJD12_17790	PF00177	Ribosomal protein S7p/S5e
BJD12_17795	PF00009	Elongation factor Tu GTP binding domain
BJD12_17795	PF00679	Elongation factor G C-terminus
BJD12_17795	PF03144	Elongation factor Tu domain 2
BJD12_17795	PF03764	Elongation factor G, domain IV
BJD12_17795	PF14492	Elongation Factor G, domain II
BJD12_17800	PF00009	Elongation factor Tu GTP binding domain
BJD12_17800	PF03143	Elongation factor Tu C-terminal domain
BJD12_17800	PF03144	Elongation factor Tu domain 2
BJD12_17805	PF00338	Ribosomal protein S10p/S20e
BJD12_17810	PF00297	Ribosomal protein L3
BJD12_17815	PF00573	Ribosomal protein L4/L1 family
BJD12_17820	PF00276	Ribosomal protein L23
BJD12_17825	PF00181	Ribosomal Proteins L2, RNA binding domain
BJD12_17825	PF03947	Ribosomal Proteins L2, C-terminal domain
BJD12_17830	PF00203	Ribosomal protein S19
BJD12_17835	PF00237	Ribosomal protein L22p/L17e
BJD12_17840	PF00189	Ribosomal protein S3, C-terminal domain
BJD12_17840	PF07650	KH domain
BJD12_17845	PF00252	Ribosomal protein L16p/L10e
BJD12_17850	PF00831	Ribosomal L29 protein
BJD12_17855	PF00366	Ribosomal protein S17
BJD12_17860	PF00238	Ribosomal protein L14p/L23e
BJD12_17865	PF00467	KOW motif
BJD12_17865	PF17136	BJD12_17865
BJD12_17870	PF00281	Ribosomal protein L5
BJD12_17870	PF00673	ribosomal L5P family C-terminus
BJD12_17875	PF00253	Ribosomal protein S14p/S29e
BJD12_17880	PF00410	Ribosomal protein S8
BJD12_17885	PF00347	Ribosomal protein L6
BJD12_17890	PF00861	Ribosomal L18p/L5e family
BJD12_17895	PF00333	Ribosomal protein S5, N-terminal domain
BJD12_17895	PF03719	Ribosomal protein S5, C-terminal domain
BJD12_17900	PF00327	Ribosomal protein L30p/L7e
BJD12_17905	PF00828	Ribosomal protein L18e/L15
BJD12_17910	PF00344	SecY translocase
BJD12_17915	PF00416	Ribosomal protein S13/S18
BJD12_17920	PF00411	Ribosomal protein S11
BJD12_17925	PF00163	Ribosomal protein S4/S9 N-terminal domain
BJD12_17925	PF01479	S4 domain
BJD12_17930	PF01000	RNA polymerase Rpb3/RpoA insert domain
BJD12_17930	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
BJD12_17930	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
BJD12_17935	PF01196	Ribosomal protein L17
BJD12_17940	PF02600	Disulfide bond formation protein DsbB
BJD12_17950	PF01474	Class-II DAHP synthetase family
BJD12_17955	PF00924	Mechanosensitive ion channel
BJD12_17960	PF01425	Amidase
BJD12_17965	PF09900	BJD12_17965
BJD12_17970	PF00009	Elongation factor Tu GTP binding domain
BJD12_17970	PF00679	Elongation factor G C-terminus
BJD12_17970	PF03144	Elongation factor Tu domain 2
BJD12_17975	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
BJD12_17980	PF00056	lactate/malate dehydrogenase, NAD binding domain
BJD12_17980	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
BJD12_17985	PF00043	Glutathione S-transferase, C-terminal domain
BJD12_17985	PF02798	Glutathione S-transferase, N-terminal domain
BJD12_17990	PF07486	Cell Wall Hydrolase
BJD12_18000	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
BJD12_18000	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BJD12_18005	PF08240	Alcohol dehydrogenase GroES-like domain
BJD12_18005	PF13602	Zinc-binding dehydrogenase
BJD12_18015	PF00691	OmpA family
BJD12_18015	PF13505	Outer membrane protein beta-barrel domain
BJD12_18025	PF00849	RNA pseudouridylate synthase
BJD12_18025	PF01479	S4 domain
BJD12_18035	PF00155	Aminotransferase class I and II
BJD12_18040	PF13531	Bacterial extracellular solute-binding protein
BJD12_18045	PF00528	Binding-protein-dependent transport system inner membrane component
BJD12_18050	PF00528	Binding-protein-dependent transport system inner membrane component
BJD12_18055	PF00005	ABC transporter
BJD12_18055	PF12857	BJD12_18055
BJD12_18060	PF09694	BJD12_18060
BJD12_18070	PF00107	Zinc-binding dehydrogenase
BJD12_18070	PF08240	Alcohol dehydrogenase GroES-like domain
BJD12_18075	PF00593	TonB dependent receptor
BJD12_18075	PF07715	TonB-dependent Receptor Plug Domain
BJD12_18080	PF04185	Phosphoesterase family
BJD12_18080	PF05506	BJD12_18080
BJD12_18090	PF00300	Histidine phosphatase superfamily (branch 1)
BJD12_18100	PF02875	Mur ligase family, glutamate ligase domain
BJD12_18100	PF08245	Mur ligase middle domain
BJD12_18105	PF05036	Sporulation related domain
BJD12_18110	PF02674	BJD12_18110
BJD12_18115	PF13522	Glutamine amidotransferase domain
BJD12_18120	PF04305	BJD12_18120
BJD12_18125	PF13688	Metallo-peptidase family M12
BJD12_18135	PF00149	Calcineurin-like phosphoesterase
BJD12_18140	PF01569	PAP2 superfamily
BJD12_18150	PF02541	Ppx/GppA phosphatase family
BJD12_18155	PF02503	Polyphosphate kinase middle domain
BJD12_18155	PF13089	Polyphosphate kinase N-terminal domain
BJD12_18155	PF13090	Polyphosphate kinase C-terminal domain
BJD12_18160	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_18160	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_18160	PF11808	BJD12_18160
BJD12_18165	PF00072	Response regulator receiver domain
BJD12_18165	PF00486	Transcriptional regulatory protein, C terminal
BJD12_18170	PF01435	Peptidase family M48
BJD12_18175	PF00462	Glutaredoxin
BJD12_18180	PF02627	Carboxymuconolactone decarboxylase family
BJD12_18185	PF00180	Isocitrate/isopropylmalate dehydrogenase
BJD12_18190	PF12811	BJD12_18190
BJD12_18210	PF02086	D12 class N6 adenine-specific DNA methyltransferase
BJD12_18280	PF15943	BJD12_18280
BJD12_18315	PF01807	CHC2 zinc finger
BJD12_18325	PF05272	BJD12_18325
BJD12_18335	PF05876	BJD12_18335
BJD12_18340	PF01520	N-acetylmuramoyl-L-alanine amidase
BJD12_18350	PF05136	BJD12_18350
BJD12_18355	PF00574	Clp protease
BJD12_18355	PF10124	BJD12_18355
BJD12_18360	PF09956	BJD12_18360
BJD12_18415	PF06791	BJD12_18415
BJD12_18415	PF09718	BJD12_18415
BJD12_18425	PF08875	BJD12_18425
BJD12_18455	PF02086	D12 class N6 adenine-specific DNA methyltransferase
BJD12_18475	PF02586	Uncharacterised ACR, COG2135
BJD12_18500	PF03583	Secretory lipase
BJD12_18505	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_18505	PF08448	PAS fold
BJD12_18515	PF05697	Bacterial trigger factor protein (TF)
BJD12_18515	PF05698	Bacterial trigger factor protein (TF) C-terminus
BJD12_18520	PF00574	Clp protease
BJD12_18525	PF06689	ClpX C4-type zinc finger
BJD12_18525	PF07724	AAA domain (Cdc48 subfamily)
BJD12_18525	PF10431	C-terminal, D2-small domain, of ClpB protein
BJD12_18530	PF00004	ATPase family associated with various cellular activities (AAA)
BJD12_18530	PF02190	ATP-dependent protease La (LON) domain
BJD12_18530	PF05362	Lon protease (S16) C-terminal proteolytic domain
BJD12_18535	PF00216	Bacterial DNA-binding protein
BJD12_18555	PF13145	PPIC-type PPIASE domain
BJD12_18555	PF13616	PPIC-type PPIASE domain
BJD12_18555	PF13623	BJD12_18555
BJD12_18560	PF01464	Transglycosylase SLT domain
BJD12_18560	PF01476	LysM domain
BJD12_18565	PF00753	Metallo-beta-lactamase superfamily
BJD12_18565	PF16123	BJD12_18565
BJD12_18575	PF00075	RNase H
BJD12_18580	PF00929	Exonuclease
BJD12_18585	PF13672	Protein phosphatase 2C
BJD12_18600	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
BJD12_18605	PF06293	Lipopolysaccharide kinase (Kdo/WaaP) family
BJD12_18610	PF12706	Beta-lactamase superfamily domain
BJD12_18615	PF04055	Radical SAM superfamily
BJD12_18615	PF06463	Molybdenum Cofactor Synthesis C
BJD12_18615	PF13353	4Fe-4S single cluster domain
BJD12_18625	PF01967	MoaC family
BJD12_18630	PF02597	ThiS family
BJD12_18635	PF02391	MoaE protein
BJD12_18645	PF00589	Phage integrase family
BJD12_18645	PF13356	Domain of unknown function (DUF4102)
BJD12_18655	PF07791	BJD12_18655
BJD12_18660	PF14412	BJD12_18660
BJD12_18670	PF06067	BJD12_18670
BJD12_18675	PF04002	RadC-like JAB domain
BJD12_18680	PF12844	Helix-turn-helix domain
BJD12_18685	PF00226	DnaJ domain
BJD12_18705	PF11726	BJD12_18705
BJD12_18710	PF05930	Prophage CP4-57 regulatory protein (AlpA)
BJD12_18715	PF01609	Transposase DDE domain
BJD12_18715	PF05598	BJD12_18715
BJD12_18730	PF13280	BJD12_18730
BJD12_18740	PF08747	Domain of unknown function (DUF1788)
BJD12_18750	PF02384	N-6 DNA Methylase
BJD12_18755	PF03235	BJD12_18755
BJD12_18755	PF07510	BJD12_18755
BJD12_18760	PF08665	BJD12_18760
BJD12_18765	PF05362	Lon protease (S16) C-terminal proteolytic domain
BJD12_18765	PF13337	BJD12_18765
BJD12_18770	PF13148	BJD12_18770
BJD12_18785	PF12169	DNA polymerase III subunits gamma and tau domain III
BJD12_18785	PF12170	DNA polymerase III tau subunit V interacting with alpha
BJD12_18785	PF13177	DNA polymerase III, delta subunit
BJD12_18790	PF02575	YbaB/EbfC DNA-binding family
BJD12_18795	PF02132	RecR protein
BJD12_18795	PF13662	Toprim domain
BJD12_18800	PF01230	HIT domain
BJD12_18805	PF03843	BJD12_18805
BJD12_18810	PF01841	Transglutaminase-like superfamily
BJD12_18810	PF11992	BJD12_18810
BJD12_18815	PF01882	BJD12_18815
BJD12_18820	PF07726	ATPase family associated with various cellular activities (AAA)
BJD12_18825	PF13231	BJD12_18825
BJD12_18830	PF00535	Glycosyl transferase family 2
BJD12_18840	PF02545	Maf-like protein
BJD12_18845	PF02620	BJD12_18845
BJD12_18850	PF01783	Ribosomal L32p protein family
BJD12_18855	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
BJD12_18855	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
BJD12_18860	PF00698	Acyl transferase domain
BJD12_18865	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_18870	PF00550	Phosphopantetheine attachment site
BJD12_18875	PF00109	Beta-ketoacyl synthase, N-terminal domain
BJD12_18875	PF02801	Beta-ketoacyl synthase, C-terminal domain
BJD12_18880	PF00425	chorismate binding enzyme
BJD12_18880	PF04715	Anthranilate synthase component I, N terminal region
BJD12_18885	PF02618	YceG-like family
BJD12_18890	PF13177	DNA polymerase III, delta subunit
BJD12_18895	PF07238	PilZ domain
BJD12_18910	PF00158	Sigma-54 interaction domain
BJD12_18910	PF02954	Bacterial regulatory protein, Fis family
BJD12_18910	PF06506	Propionate catabolism activator
BJD12_18915	PF13714	Phosphoenolpyruvate phosphomutase
BJD12_18920	PF00285	Citrate synthase
BJD12_18925	PF00330	Aconitase family (aconitate hydratase)
BJD12_18925	PF00694	Aconitase C-terminal domain
BJD12_18935	PF04303	PrpF protein
BJD12_18940	PF00593	TonB dependent receptor
BJD12_18940	PF07715	TonB-dependent Receptor Plug Domain
BJD12_18945	PF01156	Inosine-uridine preferring nucleoside hydrolase
BJD12_18955	PF00207	Alpha-2-macroglobulin family
BJD12_18955	PF01835	MG2 domain
BJD12_18955	PF07703	Alpha-2-macroglobulin family N-terminal region
BJD12_18955	PF11974	Alpha-2-macroglobulin MG1 domain
BJD12_18985	PF00593	TonB dependent receptor
BJD12_18985	PF07715	TonB-dependent Receptor Plug Domain
BJD12_18990	PF03009	Glycerophosphoryl diester phosphodiesterase family
BJD12_18990	PF16387	BJD12_18990
BJD12_18995	PF02517	CAAX protease self-immunity
BJD12_19000	PF00905	Penicillin binding protein transpeptidase domain
BJD12_19000	PF00912	Transglycosylase
BJD12_19000	PF06832	BJD12_19000
BJD12_19005	PF00210	Ferritin-like domain
BJD12_19010	PF08534	Redoxin
BJD12_19015	PF00011	Hsp20/alpha crystallin family
BJD12_19020	PF00226	DnaJ domain
BJD12_19020	PF01556	DnaJ C terminal domain
BJD12_19025	PF00072	Response regulator receiver domain
BJD12_19030	PF01145	SPFH domain / Band 7 family
BJD12_19035	PF01145	SPFH domain / Band 7 family
BJD12_19040	PF00709	Adenylosuccinate synthetase
BJD12_19045	PF01433	Peptidase family M1
BJD12_19045	PF11838	ERAP1-like C-terminal domain
BJD12_19085	PF05016	Plasmid stabilisation system protein
BJD12_19090	PF00271	Helicase conserved C-terminal domain
BJD12_19090	PF04851	Type III restriction enzyme, res subunit
BJD12_19090	PF08463	BJD12_19090
BJD12_19090	PF13588	Type I restriction enzyme R protein N terminus (HSDR_N)
BJD12_19105	PF02384	N-6 DNA Methylase
BJD12_19105	PF12161	HsdM N-terminal domain
BJD12_19110	PF01420	Type I restriction modification DNA specificity domain
BJD12_19135	PF00440	Bacterial regulatory proteins, tetR family
BJD12_19140	PF00300	Histidine phosphatase superfamily (branch 1)
BJD12_19145	PF01256	Carbohydrate kinase
BJD12_19150	PF02055	O-Glycosyl hydrolase family 30
BJD12_19150	PF17189	BJD12_19150
BJD12_19155	PF00723	Glycosyl hydrolases family 15
BJD12_19160	PF13561	Enoyl-(Acyl carrier protein) reductase
BJD12_19165	PF04250	BJD12_19165
BJD12_19170	PF07971	Glycosyl hydrolase family 92
BJD12_19175	PF13532	2OG-Fe(II) oxygenase superfamily
BJD12_19180	PF00027	Cyclic nucleotide-binding domain
BJD12_19180	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BJD12_19185	PF02148	Zn-finger in ubiquitin-hydrolases and other protein
BJD12_19195	PF00563	EAL domain
BJD12_19200	PF13328	HD domain
BJD12_19225	PF00933	Glycosyl hydrolase family 3 N terminal domain
BJD12_19225	PF01915	Glycosyl hydrolase family 3 C-terminal domain
BJD12_19225	PF14310	Fibronectin type III-like domain
BJD12_19230	PF00107	Zinc-binding dehydrogenase
BJD12_19230	PF08240	Alcohol dehydrogenase GroES-like domain
BJD12_19235	PF00440	Bacterial regulatory proteins, tetR family
BJD12_19240	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BJD12_19240	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
BJD12_19245	PF00941	FAD binding domain in molybdopterin dehydrogenase
BJD12_19245	PF03450	CO dehydrogenase flavoprotein C-terminal domain
BJD12_19250	PF00111	2Fe-2S iron-sulfur cluster binding domain
BJD12_19250	PF01799	[2Fe-2S] binding domain
BJD12_19255	PF05559	BJD12_19255
BJD12_19265	PF07883	Cupin domain
BJD12_19275	PF00717	Peptidase S24-like
BJD12_19275	PF01726	LexA DNA binding domain
BJD12_19285	PF00817	impB/mucB/samB family
BJD12_19295	PF02811	PHP domain
BJD12_19295	PF07733	Bacterial DNA polymerase III alpha subunit
BJD12_19295	PF14579	Helix-hairpin-helix motif
BJD12_19300	PF08668	HDOD domain
BJD12_19310	PF03169	BJD12_19310
BJD12_19315	PF13557	BJD12_19315
BJD12_19320	PF00326	Prolyl oligopeptidase family
BJD12_19320	PF07676	WD40-like Beta Propeller Repeat
BJD12_19335	PF08448	PAS fold
BJD12_19335	PF12833	Helix-turn-helix domain
BJD12_19340	PF15589	BJD12_19340
BJD12_19345	PF00199	Catalase
BJD12_19345	PF06628	Catalase-related immune-responsive
BJD12_19350	PF00248	Aldo/keto reductase family
BJD12_19355	PF00135	Carboxylesterase family
BJD12_19360	PF02347	Glycine cleavage system P-protein
BJD12_19365	PF07690	Major Facilitator Superfamily
BJD12_19380	PF01401	Angiotensin-converting enzyme
BJD12_19385	PF00884	Sulfatase
BJD12_19385	PF08019	BJD12_19385
BJD12_19390	PF01569	PAP2 superfamily
BJD12_19395	PF13231	BJD12_19395
BJD12_19400	PF00072	Response regulator receiver domain
BJD12_19400	PF00486	Transcriptional regulatory protein, C terminal
BJD12_19405	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_19405	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_19415	PF03776	Septum formation topological specificity factor MinE
BJD12_19420	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
BJD12_19425	PF03775	Septum formation inhibitor MinC, C-terminal domain
BJD12_19425	PF05209	Septum formation inhibitor MinC, N-terminal domain
BJD12_19430	PF00583	Acetyltransferase (GNAT) family
BJD12_19435	PF07730	Histidine kinase
BJD12_19440	PF00072	Response regulator receiver domain
BJD12_19440	PF00196	Bacterial regulatory proteins, luxR family
BJD12_19450	PF04241	BJD12_19450
BJD12_19455	PF00730	HhH-GPD superfamily base excision DNA repair protein
BJD12_19460	PF02557	D-alanyl-D-alanine carboxypeptidase
BJD12_19465	PF10882	BJD12_19465
BJD12_19480	PF01145	SPFH domain / Band 7 family
BJD12_19485	PF01370	NAD dependent epimerase/dehydratase family
BJD12_19485	PF02222	ATP-grasp domain
BJD12_19500	PF03372	Endonuclease/Exonuclease/phosphatase family
BJD12_19505	PF04376	BJD12_19505
BJD12_19505	PF04377	BJD12_19505
BJD12_19510	PF13202	EF hand
BJD12_19510	PF13499	EF-hand domain pair
BJD12_19520	PF09413	Domain of unknown function (DUF2007)
BJD12_19525	PF13622	Thioesterase-like superfamily
BJD12_19530	PF00378	Enoyl-CoA hydratase/isomerase family
BJD12_19535	PF13279	Thioesterase-like superfamily
BJD12_19540	PF00005	ABC transporter
BJD12_19545	PF00829	Ribosomal prokaryotic L21 protein
BJD12_19550	PF01016	Ribosomal L27 protein
BJD12_19555	PF01018	GTP1/OBG
BJD12_19555	PF01926	50S ribosome-binding GTPase
BJD12_19560	PF01649	Ribosomal protein S20
BJD12_19565	PF03023	BJD12_19565
BJD12_19570	PF01687	Riboflavin kinase
BJD12_19570	PF06574	FAD synthetase
BJD12_19575	PF00133	tRNA synthetases class I (I, L, M and V)
BJD12_19575	PF06827	Zinc finger found in FPG and IleRS
BJD12_19575	PF08264	Anticodon-binding domain of tRNA
BJD12_19580	PF01252	BJD12_19580
BJD12_19585	PF02401	LytB protein
BJD12_19600	PF00115	Cytochrome C and Quinol oxidase polypeptide I
BJD12_19605	PF00510	Cytochrome c oxidase subunit III
BJD12_19610	PF03626	BJD12_19610
BJD12_19615	PF05299	M61 glycyl aminopeptidase
BJD12_19615	PF07720	Tetratricopeptide repeat
BJD12_19620	PF13481	AAA domain
BJD12_19620	PF13541	Subunit ChlI of Mg-chelatase
BJD12_19625	PF05656	BJD12_19625
BJD12_19630	PF00486	Transcriptional regulatory protein, C terminal
BJD12_19635	PF12833	Helix-turn-helix domain
BJD12_19640	PF00183	Hsp90 protein
BJD12_19640	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_19650	PF01740	STAS domain
BJD12_19650	PF14361	BJD12_19650
BJD12_19660	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_19665	PF07228	Stage II sporulation protein E (SpoIIE)
BJD12_19665	PF13581	Histidine kinase-like ATPase domain
BJD12_19670	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_19670	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_19675	PF00072	Response regulator receiver domain
BJD12_19675	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_19675	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_19675	PF08448	PAS fold
BJD12_19680	PF04616	Glycosyl hydrolases family 43
BJD12_19685	PF00593	TonB dependent receptor
BJD12_19685	PF07715	TonB-dependent Receptor Plug Domain
BJD12_19690	PF00085	Thioredoxin
BJD12_19695	PF07237	Protein of unknown function (DUF1428)
BJD12_19700	PF00072	Response regulator receiver domain
BJD12_19700	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_19700	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_19705	PF01339	CheB methylesterase
BJD12_19710	PF01739	CheR methyltransferase, SAM binding domain
BJD12_19710	PF03705	CheR methyltransferase, all-alpha domain
BJD12_19715	PF00072	Response regulator receiver domain
BJD12_19715	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_19715	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_19715	PF13185	GAF domain
BJD12_19720	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_19720	PF13426	PAS domain
BJD12_19725	PF00072	Response regulator receiver domain
BJD12_19730	PF00722	Glycosyl hydrolases family 16
BJD12_19735	PF11391	BJD12_19735
BJD12_19740	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_19740	PF03466	LysR substrate binding domain
BJD12_19745	PF06964	Alpha-L-arabinofuranosidase C-terminus
BJD12_19755	PF01263	Aldose 1-epimerase
BJD12_19760	PF01578	BJD12_19760
BJD12_19765	PF00448	SRP54-type protein, GTPase domain
BJD12_19765	PF02881	SRP54-type protein, helical bundle domain
BJD12_19765	PF02978	Signal peptide binding domain
BJD12_19770	PF10077	BJD12_19770
BJD12_19775	PF03060	Nitronate monooxygenase
BJD12_19780	PF01063	Aminotransferase class IV
BJD12_19785	PF00886	Ribosomal protein S16
BJD12_19790	PF01782	RimM N-terminal domain
BJD12_19790	PF05239	PRC-barrel domain
BJD12_19795	PF01746	tRNA (Guanine-1)-methyltransferase
BJD12_19800	PF01245	Ribosomal protein L19
BJD12_19805	PF01554	MatE
BJD12_19810	PF01479	S4 domain
BJD12_19815	PF00141	Peroxidase
BJD12_19820	PF06078	Bacterial protein of unknown function (DUF937)
BJD12_19825	PF00488	MutS domain V
BJD12_19825	PF01624	MutS domain I
BJD12_19825	PF05188	MutS domain II
BJD12_19825	PF05190	MutS family domain IV
BJD12_19825	PF05192	MutS domain III
BJD12_19835	PF00665	Integrase core domain
BJD12_19835	PF13276	BJD12_19835
BJD12_19840	PF01527	Transposase
BJD12_19870	PF03389	MobA/MobL family
BJD12_19885	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_19885	PF00672	HAMP domain
BJD12_19885	PF12729	BJD12_19885
BJD12_19895	PF00754	F5/8 type C domain
BJD12_19895	PF01120	Alpha-L-fucosidase
BJD12_19905	PF00703	Glycosyl hydrolases family 2
BJD12_19905	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
BJD12_19905	PF02837	Glycosyl hydrolases family 2, sugar binding domain
BJD12_19905	PF16355	BJD12_19905
BJD12_19910	PF07745	Glycosyl hydrolase family 53
BJD12_19915	PF00593	TonB dependent receptor
BJD12_19915	PF07715	TonB-dependent Receptor Plug Domain
BJD12_19920	PF06114	Domain of unknown function (DUF955)
BJD12_19920	PF09856	BJD12_19920
BJD12_19920	PF13560	Helix-turn-helix domain
BJD12_19925	PF00171	Aldehyde dehydrogenase family
BJD12_19930	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BJD12_19930	PF02770	Acyl-CoA dehydrogenase, middle domain
BJD12_19930	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BJD12_19935	PF00378	Enoyl-CoA hydratase/isomerase family
BJD12_19940	PF16113	BJD12_19940
BJD12_19945	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BJD12_19945	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
BJD12_19950	PF01545	Cation efflux family
BJD12_19960	PF00378	Enoyl-CoA hydratase/isomerase family
BJD12_19960	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
BJD12_19960	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
BJD12_19965	PF04542	Sigma-70 region 2
BJD12_19965	PF08281	Sigma-70, region 4
BJD12_19970	PF03872	Anti sigma-E protein RseA, N-terminal domain
BJD12_19975	PF13180	PDZ domain
BJD12_19975	PF13365	Trypsin-like peptidase domain
BJD12_19980	PF00009	Elongation factor Tu GTP binding domain
BJD12_19980	PF00679	Elongation factor G C-terminus
BJD12_19980	PF03144	Elongation factor Tu domain 2
BJD12_19980	PF06421	GTP-binding protein LepA C-terminus
BJD12_19985	PF00717	Peptidase S24-like
BJD12_19990	PF16137	BJD12_19990
BJD12_19995	PF00035	Double-stranded RNA binding motif
BJD12_19995	PF14622	Ribonuclease-III-like
BJD12_20000	PF01926	50S ribosome-binding GTPase
BJD12_20000	PF07650	KH domain
BJD12_20010	PF02565	Recombination protein O C terminal
BJD12_20010	PF11967	Recombination protein O N terminal
BJD12_20015	PF00072	Response regulator receiver domain
BJD12_20015	PF01627	Hpt domain
BJD12_20020	PF05958	tRNA (Uracil-5-)-methyltransferase
BJD12_20030	PF01928	CYTH domain
BJD12_20035	PF01323	DSBA-like thioredoxin domain
BJD12_20040	PF01593	Flavin containing amine oxidoreductase
BJD12_20040	PF13450	NAD(P)-binding Rossmann-like domain
BJD12_20045	PF04244	Deoxyribodipyrimidine photo-lyase-related protein
BJD12_20050	PF00933	Glycosyl hydrolase family 3 N terminal domain
BJD12_20055	PF00156	Phosphoribosyl transferase domain
BJD12_20060	PF01048	Phosphorylase superfamily
BJD12_20065	PF00313	'Cold-shock' DNA-binding domain
BJD12_20070	PF01494	FAD binding domain
BJD12_20075	PF00149	Calcineurin-like phosphoesterase
BJD12_20080	PF00270	DEAD/DEAH box helicase
BJD12_20080	PF00271	Helicase conserved C-terminal domain
BJD12_20080	PF08494	BJD12_20080
BJD12_20085	PF01068	ATP dependent DNA ligase domain
BJD12_20085	PF04675	DNA ligase N terminus
BJD12_20085	PF04679	ATP dependent DNA ligase C terminal region
BJD12_20110	PF00990	GGDEF domain
BJD12_20110	PF05227	CHASE3 domain
BJD12_20110	PF13185	GAF domain
BJD12_20125	PF00108	Thiolase, N-terminal domain
BJD12_20125	PF02803	Thiolase, C-terminal domain
BJD12_20130	PF00082	Subtilase family
BJD12_20130	PF03797	Autotransporter beta-domain
BJD12_20130	PF12951	BJD12_20130
BJD12_20135	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BJD12_20135	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
BJD12_20140	PF13640	2OG-Fe(II) oxygenase superfamily
BJD12_20145	PF01863	Protein of unknown function DUF45
BJD12_20150	PF07043	BJD12_20150
BJD12_20155	PF10982	Protein of unknown function (DUF2789)
BJD12_20160	PF01258	Prokaryotic dksA/traR C4-type zinc finger
BJD12_20165	PF00924	Mechanosensitive ion channel
BJD12_20195	PF00012	Hsp70 protein
BJD12_20200	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
BJD12_20205	PF01545	Cation efflux family
BJD12_20210	PF03831	PhnA protein
BJD12_20210	PF08274	PhnA Zinc-Ribbon
BJD12_20220	PF03734	L,D-transpeptidase catalytic domain
BJD12_20225	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
BJD12_20230	PF07690	Major Facilitator Superfamily
BJD12_20240	PF09537	Domain of unknown function (DUF2383)
BJD12_20245	PF13563	2'-5' RNA ligase superfamily
BJD12_20255	PF09791	BJD12_20255
BJD12_20260	PF06057	Bacterial virulence protein (VirJ)
BJD12_20265	PF09924	Uncharacterized conserved protein (DUF2156)
BJD12_20270	PF06197	BJD12_20270
BJD12_20275	PF01042	Endoribonuclease L-PSP
BJD12_20280	PF02353	Mycolic acid cyclopropane synthetase
BJD12_20285	PF06966	BJD12_20285
BJD12_20290	PF11086	BJD12_20290
BJD12_20295	PF02353	Mycolic acid cyclopropane synthetase
BJD12_20300	PF07103	BJD12_20300
BJD12_20305	PF13450	NAD(P)-binding Rossmann-like domain
BJD12_20310	PF00487	BJD12_20310
BJD12_20315	PF10099	BJD12_20315
BJD12_20320	PF04542	Sigma-70 region 2
BJD12_20320	PF08281	Sigma-70, region 4
BJD12_20335	PF04060	Putative Fe-S cluster
BJD12_20335	PF14697	4Fe-4S dicluster domain
BJD12_20340	PF12710	haloacid dehalogenase-like hydrolase
BJD12_20345	PF01588	Putative tRNA binding domain
BJD12_20345	PF09334	tRNA synthetases class I (M)
BJD12_20350	PF09917	Uncharacterized protein conserved in bacteria (DUF2147)
BJD12_20365	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BJD12_20370	PF00324	Amino acid permease
BJD12_20375	PF02574	Homocysteine S-methyltransferase
BJD12_20380	PF05960	Bacterial protein of unknown function (DUF885)
BJD12_20385	PF02592	BJD12_20385
BJD12_20390	PF04367	BJD12_20390
BJD12_20405	PF13372	Alginate export
BJD12_20410	PF03551	Transcriptional regulator PadR-like family
BJD12_20415	PF13796	BJD12_20415
BJD12_20420	PF06850	BJD12_20420
BJD12_20425	PF13489	Methyltransferase domain
BJD12_20430	PF03653	BJD12_20430
BJD12_20435	PF14559	Tetratricopeptide repeat
BJD12_20440	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
BJD12_20445	PF01336	OB-fold nucleic acid binding domain
BJD12_20445	PF02811	PHP domain
BJD12_20445	PF07733	Bacterial DNA polymerase III alpha subunit
BJD12_20445	PF14579	Helix-hairpin-helix motif
BJD12_20450	PF01351	Ribonuclease HII
BJD12_20455	PF02684	BJD12_20455
BJD12_20460	PF00132	Bacterial transferase hexapeptide (six repeats)
BJD12_20460	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
BJD12_20465	PF07977	FabA-like domain
BJD12_20470	PF00132	Bacterial transferase hexapeptide (six repeats)
BJD12_20470	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
BJD12_20480	PF01103	Surface antigen
BJD12_20480	PF07244	Surface antigen variable number repeat
BJD12_20485	PF00595	PDZ domain (Also known as DHR or GLGF)
BJD12_20485	PF02163	Peptidase family M50
BJD12_20490	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
BJD12_20490	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
BJD12_20490	PF13288	DXP reductoisomerase C-terminal domain
BJD12_20495	PF01148	Cytidylyltransferase family
BJD12_20500	PF01255	Putative undecaprenyl diphosphate synthase
BJD12_20505	PF01765	Ribosome recycling factor
BJD12_20510	PF00696	Amino acid kinase family
BJD12_20515	PF00990	GGDEF domain
BJD12_20515	PF08668	HDOD domain
BJD12_20520	PF00889	Elongation factor TS
BJD12_20525	PF00318	Ribosomal protein S2
BJD12_20530	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
BJD12_20540	PF05229	BJD12_20540
BJD12_20545	PF00577	Outer membrane usher protein
BJD12_20545	PF13953	PapC C-terminal domain
BJD12_20550	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
BJD12_20555	PF05229	BJD12_20555
BJD12_20560	PF00557	Metallopeptidase family M24
BJD12_20565	PF01909	Nucleotidyltransferase domain
BJD12_20565	PF01966	HD domain
BJD12_20565	PF08335	GlnD PII-uridylyltransferase
BJD12_20570	PF00132	Bacterial transferase hexapeptide (six repeats)
BJD12_20570	PF14602	Hexapeptide repeat of succinyl-transferase
BJD12_20570	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
BJD12_20580	PF03960	ArsC family
BJD12_20585	PF01546	Peptidase family M20/M25/M40
BJD12_20585	PF07687	Peptidase dimerisation domain
BJD12_20590	PF00733	Asparagine synthase
BJD12_20590	PF13537	Glutamine amidotransferase domain
BJD12_20595	PF13229	Right handed beta helix region
BJD12_20600	PF00593	TonB dependent receptor
BJD12_20600	PF07715	TonB-dependent Receptor Plug Domain
BJD12_20605	PF01804	Penicillin amidase
BJD12_20610	PF00210	Ferritin-like domain
BJD12_20615	PF05724	Thiopurine S-methyltransferase (TPMT)
BJD12_20625	PF00521	DNA gyrase/topoisomerase IV, subunit A
BJD12_20625	PF03989	DNA gyrase C-terminal domain, beta-propeller
BJD12_20630	PF02311	AraC-like ligand binding domain
BJD12_20630	PF12833	Helix-turn-helix domain
BJD12_20635	PF01047	MarR family
BJD12_20640	PF02321	Outer membrane efflux protein
BJD12_20645	PF13533	Biotin-lipoyl like
BJD12_20645	PF16576	BJD12_20645
BJD12_20650	PF07690	Major Facilitator Superfamily
BJD12_20665	PF00933	Glycosyl hydrolase family 3 N terminal domain
BJD12_20665	PF01915	Glycosyl hydrolase family 3 C-terminal domain
BJD12_20665	PF14310	Fibronectin type III-like domain
BJD12_20670	PF00246	Zinc carboxypeptidase
BJD12_20675	PF00854	POT family
BJD12_20680	PF01694	Rhomboid family
BJD12_20690	PF14542	GCN5-related N-acetyl-transferase
BJD12_20695	PF13739	Domain of unknown function (DUF4163)
BJD12_20700	PF01047	MarR family
BJD12_20705	PF01432	Peptidase family M3
BJD12_20710	PF00255	Glutathione peroxidase
BJD12_20715	PF00175	Oxidoreductase NAD-binding domain
BJD12_20715	PF00970	Oxidoreductase FAD-binding domain
BJD12_20720	PF00005	ABC transporter
BJD12_20725	PF01047	MarR family
BJD12_20730	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BJD12_20735	PF05681	BJD12_20735
BJD12_20735	PF05683	Fumarase C-terminus
BJD12_20745	PF02798	Glutathione S-transferase, N-terminal domain
BJD12_20745	PF14497	Glutathione S-transferase, C-terminal domain
BJD12_20750	PF00484	Carbonic anhydrase
BJD12_20755	PF02253	Phospholipase A1
BJD12_20760	PF04306	BJD12_20760
BJD12_20765	PF00313	'Cold-shock' DNA-binding domain
BJD12_20770	PF05433	BJD12_20770
BJD12_20780	PF00899	ThiF family
BJD12_20785	PF01026	TatD related DNase
BJD12_20795	PF05433	BJD12_20795
BJD12_20800	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BJD12_20800	PF02770	Acyl-CoA dehydrogenase, middle domain
BJD12_20800	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BJD12_20805	PF01841	Transglutaminase-like superfamily
BJD12_20805	PF04893	BJD12_20805
BJD12_20805	PF12969	Domain of Unknown Function with PDB structure (DUF3857)
BJD12_20810	PF00043	Glutathione S-transferase, C-terminal domain
BJD12_20810	PF02798	Glutathione S-transferase, N-terminal domain
BJD12_20815	PF00733	Asparagine synthase
BJD12_20815	PF13537	Glutamine amidotransferase domain
BJD12_20820	PF03358	NADPH-dependent FMN reductase
BJD12_20825	PF00772	DnaB-like helicase N terminal domain
BJD12_20825	PF03796	DnaB-like helicase C terminal domain
BJD12_20830	PF00875	DNA photolyase
BJD12_20830	PF03441	FAD binding domain of DNA photolyase
BJD12_20840	PF00691	OmpA family
BJD12_20840	PF13488	BJD12_20840
BJD12_20845	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_20845	PF03466	LysR substrate binding domain
BJD12_20855	PF00106	short chain dehydrogenase
BJD12_20860	PF16576	BJD12_20860
BJD12_20865	PF00873	AcrB/AcrD/AcrF family
BJD12_20870	PF00106	short chain dehydrogenase
BJD12_20875	PF02321	Outer membrane efflux protein
BJD12_20880	PF00990	GGDEF domain
BJD12_20890	PF00990	GGDEF domain
BJD12_20890	PF05227	CHASE3 domain
BJD12_20890	PF13185	GAF domain
BJD12_20905	PF00082	Subtilase family
BJD12_20910	PF01668	SmpB protein
BJD12_20915	PF03364	Polyketide cyclase / dehydrase and lipid transport
BJD12_20920	PF03658	RnfH family Ubiquitin
BJD12_20925	PF04355	SmpA / OmlA family
BJD12_20930	PF01475	Ferric uptake regulator family
BJD12_20935	PF02463	RecF/RecN/SMC N terminal domain
BJD12_20940	PF01628	HrcA protein C terminal domain
BJD12_20940	PF03444	Winged helix-turn-helix transcription repressor, HrcA DNA-binding
BJD12_20945	PF01025	GrpE
BJD12_20950	PF00012	Hsp70 protein
BJD12_20955	PF00226	DnaJ domain
BJD12_20955	PF00684	DnaJ central domain
BJD12_20955	PF01556	DnaJ C terminal domain
BJD12_20960	PF08543	Phosphomethylpyrimidine kinase
BJD12_20965	PF02153	Prephenate dehydrogenase
BJD12_20975	PF02321	Outer membrane efflux protein
BJD12_20980	PF16576	BJD12_20980
BJD12_20990	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_20990	PF03466	LysR substrate binding domain
BJD12_20995	PF00005	ABC transporter
BJD12_20995	PF00664	ABC transporter transmembrane region
BJD12_21000	PF01205	Uncharacterized protein family UPF0029
BJD12_21000	PF09186	Domain of unknown function (DUF1949)
BJD12_21005	PF03641	Possible lysine decarboxylase
BJD12_21010	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BJD12_21010	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BJD12_21015	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BJD12_21015	PF00364	Biotin-requiring enzyme
BJD12_21015	PF02817	e3 binding domain
BJD12_21020	PF00676	Dehydrogenase E1 component
BJD12_21020	PF02779	Transketolase, pyrimidine binding domain
BJD12_21020	PF16078	BJD12_21020
BJD12_21020	PF16870	BJD12_21020
BJD12_21025	PF13673	Acetyltransferase (GNAT) domain
BJD12_21030	PF08007	Cupin superfamily protein
BJD12_21035	PF11259	BJD12_21035
BJD12_21040	PF00206	Lyase
BJD12_21040	PF08328	Adenylosuccinate lyase C-terminal
BJD12_21045	PF00571	CBS domain
BJD12_21045	PF01595	BJD12_21045
BJD12_21045	PF03471	Transporter associated domain
BJD12_21050	PF00206	Lyase
BJD12_21050	PF10415	Fumarase C C-terminus
BJD12_21060	PF11101	BJD12_21060
BJD12_21075	PF00005	ABC transporter
BJD12_21080	PF00392	Bacterial regulatory proteins, gntR family
BJD12_21090	PF00255	Glutathione peroxidase
BJD12_21095	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
BJD12_21095	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
BJD12_21100	PF04102	SlyX
BJD12_21105	PF09831	BJD12_21105
BJD12_21110	PF13557	BJD12_21110
BJD12_21115	PF00356	Bacterial regulatory proteins, lacI family
BJD12_21115	PF13377	Periplasmic binding protein-like domain
BJD12_21120	PF07690	Major Facilitator Superfamily
BJD12_21125	PF00294	pfkB family carbohydrate kinase
BJD12_21130	PF07221	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
BJD12_21135	PF00809	Pterin binding enzyme
BJD12_21135	PF02310	B12 binding domain
BJD12_21135	PF02607	B12 binding domain
BJD12_21135	PF02965	Vitamin B12 dependent methionine synthase, activation domain
BJD12_21140	PF02574	Homocysteine S-methyltransferase
BJD12_21145	PF01022	Bacterial regulatory protein, arsR family
BJD12_21145	PF08241	Methyltransferase domain
BJD12_21150	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BJD12_21150	PF02770	Acyl-CoA dehydrogenase, middle domain
BJD12_21150	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BJD12_21155	PF13472	GDSL-like Lipase/Acylhydrolase family
BJD12_21165	PF00575	S1 RNA binding domain
BJD12_21165	PF00773	RNB domain
BJD12_21165	PF08206	Ribonuclease B OB domain
BJD12_21170	PF04828	Glutathione-dependent formaldehyde-activating enzyme
BJD12_21175	PF00588	SpoU rRNA Methylase family
BJD12_21175	PF08032	RNA 2'-O ribose methyltransferase substrate binding
BJD12_21180	PF00990	GGDEF domain
BJD12_21180	PF07494	Two component regulator propeller
BJD12_21180	PF07495	Y_Y_Y domain
BJD12_21185	PF00929	Exonuclease
BJD12_21195	PF01527	Transposase
BJD12_21200	PF11776	Domain of unknown function (DUF3315)
BJD12_21205	PF01895	PhoU domain
BJD12_21210	PF00005	ABC transporter
BJD12_21215	PF00528	Binding-protein-dependent transport system inner membrane component
BJD12_21220	PF00528	Binding-protein-dependent transport system inner membrane component
BJD12_21225	PF12849	PBP superfamily domain
BJD12_21235	PF07396	Phosphate-selective porin O and P
BJD12_21245	PF00484	Carbonic anhydrase
BJD12_21250	PF00916	BJD12_21250
BJD12_21255	PF00633	Helix-hairpin-helix motif
BJD12_21255	PF00730	HhH-GPD superfamily base excision DNA repair protein
BJD12_21265	PF00378	Enoyl-CoA hydratase/isomerase family
BJD12_21270	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
BJD12_21270	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
BJD12_21275	PF00293	NUDIX domain
BJD12_21275	PF06945	BJD12_21275
BJD12_21280	PF00581	Rhodanese-like domain
BJD12_21285	PF07920	Protein of unknown function (DUF1684)
BJD12_21290	PF01510	N-acetylmuramoyl-L-alanine amidase
BJD12_21295	PF03473	MOSC domain
BJD12_21300	PF12697	Alpha/beta hydrolase family
BJD12_21305	PF00583	Acetyltransferase (GNAT) family
BJD12_21320	PF00005	ABC transporter
BJD12_21325	PF01170	Putative RNA methylase family UPF0020
BJD12_21325	PF02926	THUMP domain
BJD12_21325	PF10672	S-adenosylmethionine-dependent methyltransferase
BJD12_21335	PF01513	ATP-NAD kinase
BJD12_21340	PF06189	BJD12_21340
BJD12_21350	PF11159	BJD12_21350
BJD12_21355	PF09365	BJD12_21355
BJD12_21360	PF00929	Exonuclease
BJD12_21360	PF08411	Exonuclease C-terminal
BJD12_21365	PF01494	FAD binding domain
BJD12_21370	PF00266	Aminotransferase class-V
BJD12_21375	PF12805	BJD12_21375
BJD12_21375	PF13515	BJD12_21375
BJD12_21380	PF06052	3-hydroxyanthranilic acid dioxygenase
BJD12_21385	PF00484	Carbonic anhydrase
BJD12_21390	PF04299	Putative FMN-binding domain
BJD12_21410	PF00152	tRNA synthetases class II (D, K and N)
BJD12_21410	PF01336	OB-fold nucleic acid binding domain
BJD12_21415	PF01521	Iron-sulphur cluster biosynthesis
BJD12_21420	PF01250	Ribosomal protein S6
BJD12_21425	PF01084	Ribosomal protein S18
BJD12_21430	PF01281	Ribosomal protein L9, N-terminal domain
BJD12_21430	PF03948	Ribosomal protein L9, C-terminal domain
BJD12_21435	PF02463	RecF/RecN/SMC N terminal domain
BJD12_21440	PF04354	ZipA, C-terminal FtsZ-binding domain
BJD12_21450	PF00155	Aminotransferase class I and II
BJD12_21455	PF00533	BRCA1 C Terminus (BRCT) domain
BJD12_21455	PF01653	NAD-dependent DNA ligase adenylation domain
BJD12_21455	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
BJD12_21455	PF03120	NAD-dependent DNA ligase OB-fold domain
BJD12_21455	PF12826	Helix-hairpin-helix motif
BJD12_21460	PF00152	tRNA synthetases class II (D, K and N)
BJD12_21465	PF11218	BJD12_21465
BJD12_21490	PF01008	Initiation factor 2 subunit family
BJD12_21495	PF00521	DNA gyrase/topoisomerase IV, subunit A
BJD12_21495	PF03989	DNA gyrase C-terminal domain, beta-propeller
BJD12_21500	PF01011	PQQ enzyme repeat
BJD12_21500	PF13360	PQQ-like domain
BJD12_21510	PF01757	BJD12_21510
BJD12_21515	PF01175	Urocanase
BJD12_21515	PF17391	BJD12_21515
BJD12_21515	PF17392	BJD12_21515
BJD12_21520	PF05013	N-formylglutamate amidohydrolase
BJD12_21525	PF00221	Aromatic amino acid lyase
BJD12_21530	PF07969	Amidohydrolase family
BJD12_21535	PF01979	Amidohydrolase family
BJD12_21540	PF00392	Bacterial regulatory proteins, gntR family
BJD12_21540	PF07702	UTRA domain
BJD12_21545	PF04471	Restriction endonuclease
BJD12_21555	PF05597	BJD12_21555
BJD12_21560	PF09650	BJD12_21560
BJD12_21565	PF16697	BJD12_21565
BJD12_21570	PF01794	BJD12_21570
BJD12_21575	PF00174	Oxidoreductase molybdopterin binding domain
BJD12_21580	PF00266	Aminotransferase class-V
BJD12_21585	PF00800	Prephenate dehydratase
BJD12_21585	PF01817	Chorismate mutase type II
BJD12_21585	PF01842	ACT domain
BJD12_21590	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
BJD12_21595	PF03544	Gram-negative bacterial TonB protein C-terminal
BJD12_21600	PF03544	Gram-negative bacterial TonB protein C-terminal
BJD12_21605	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BJD12_21605	PF02403	Seryl-tRNA synthetase N-terminal domain
BJD12_21610	PF02525	Flavodoxin-like fold
BJD12_21615	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_21615	PF03466	LysR substrate binding domain
BJD12_21625	PF00589	Phage integrase family
BJD12_21655	PF01381	Helix-turn-helix
BJD12_21665	PF00589	Phage integrase family
BJD12_21680	PF14891	Effector protein
BJD12_21690	PF04002	RadC-like JAB domain
BJD12_21715	PF07791	BJD12_21715
BJD12_21720	PF14412	BJD12_21720
BJD12_21735	PF00656	Caspase domain
BJD12_21740	PF13676	TIR domain
BJD12_21745	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
BJD12_21750	PF06412	BJD12_21750
BJD12_21755	PF03389	MobA/MobL family
BJD12_21765	PF02086	D12 class N6 adenine-specific DNA methyltransferase
BJD12_21775	PF04343	BJD12_21775
BJD12_21780	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_21780	PF12729	BJD12_21780
BJD12_21785	PF00072	Response regulator receiver domain
BJD12_21785	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_21785	PF00989	PAS fold
BJD12_21785	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_21785	PF08447	PAS fold
BJD12_21785	PF08448	PAS fold
BJD12_21790	PF00072	Response regulator receiver domain
BJD12_21795	PF06745	KaiC
BJD12_21800	PF00072	Response regulator receiver domain
BJD12_21800	PF00512	His Kinase A (phospho-acceptor) domain
BJD12_21800	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_21800	PF08448	PAS fold
BJD12_21810	PF03918	Cytochrome C biogenesis protein
BJD12_21815	PF08534	Redoxin
BJD12_21820	PF01578	BJD12_21820
BJD12_21820	PF16327	BJD12_21820
BJD12_21825	PF03100	CcmE
BJD12_21830	PF04995	BJD12_21830
BJD12_21835	PF01578	BJD12_21835
BJD12_21840	PF00082	Subtilase family
BJD12_21845	PF13490	Putative zinc-finger
BJD12_21850	PF04542	Sigma-70 region 2
BJD12_21850	PF08281	Sigma-70, region 4
BJD12_21860	PF00034	Cytochrome c
BJD12_21870	PF01292	Prokaryotic cytochrome b561
BJD12_21880	PF05523	WxcM-like, C-terminal
BJD12_21885	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
BJD12_21890	PF01943	BJD12_21890
BJD12_21895	PF00535	Glycosyl transferase family 2
BJD12_21905	PF02706	Chain length determinant protein
BJD12_21915	PF13649	Methyltransferase domain
BJD12_21920	PF01979	Amidohydrolase family
BJD12_21925	PF08241	Methyltransferase domain
BJD12_21930	PF00534	Glycosyl transferases group 1
BJD12_21930	PF13439	Glycosyltransferase Family 4
BJD12_21935	PF00534	Glycosyl transferases group 1
BJD12_21935	PF13579	Glycosyl transferase 4-like domain
BJD12_21940	PF14907	Uncharacterised nucleotidyltransferase
BJD12_21945	PF04055	Radical SAM superfamily
BJD12_21955	PF00005	ABC transporter
BJD12_21960	PF00083	Sugar (and other) transporter
BJD12_21965	PF00296	Luciferase-like monooxygenase
BJD12_21970	PF16242	BJD12_21970
BJD12_21975	PF06055	BJD12_21975
BJD12_21980	PF00571	CBS domain
BJD12_21980	PF01595	BJD12_21980
BJD12_21980	PF03471	Transporter associated domain
BJD12_21990	PF01865	Protein of unknown function DUF47
BJD12_21995	PF01384	BJD12_21995
BJD12_22000	PF02698	DUF218 domain
BJD12_22005	PF00450	Serine carboxypeptidase
BJD12_22010	PF02611	CDP-diacylglycerol pyrophosphatase
BJD12_22015	PF00204	DNA gyrase B
BJD12_22015	PF00986	DNA gyrase B subunit, carboxyl terminus
BJD12_22015	PF01751	Toprim domain
BJD12_22015	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_22025	PF00117	Glutamine amidotransferase class-I
BJD12_22025	PF06418	CTP synthase N-terminus
BJD12_22030	PF00793	DAHP synthetase I family
BJD12_22040	PF00113	Enolase, C-terminal TIM barrel domain
BJD12_22040	PF03952	Enolase, N-terminal domain
BJD12_22045	PF04977	Septum formation initiator
BJD12_22050	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
BJD12_22055	PF02542	YgbB family
BJD12_22060	PF01142	tRNA pseudouridine synthase D (TruD)
BJD12_22065	PF01713	Smr domain
BJD12_22070	PF01975	Survival protein SurE
BJD12_22075	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
BJD12_22080	PF09335	BJD12_22080
BJD12_22085	PF01476	LysM domain
BJD12_22085	PF01551	Peptidase family M23
BJD12_22090	PF04430	Protein of unknown function (DUF498/DUF598)
BJD12_22095	PF01985	CRS1 / YhbY (CRM) domain
BJD12_22100	PF01728	FtsJ-like methyltransferase
BJD12_22105	PF00004	ATPase family associated with various cellular activities (AAA)
BJD12_22105	PF01434	Peptidase family M41
BJD12_22105	PF06480	FtsH Extracellular
BJD12_22110	PF00809	Pterin binding enzyme
BJD12_22115	PF01715	IPP transferase
BJD12_22120	PF17209	BJD12_22120
BJD12_22125	PF01926	50S ribosome-binding GTPase
BJD12_22125	PF13167	BJD12_22125
BJD12_22125	PF16360	BJD12_22125
BJD12_22130	PF02464	Competence-damaged protein
BJD12_22135	PF00593	TonB dependent receptor
BJD12_22135	PF07715	TonB-dependent Receptor Plug Domain
BJD12_22140	PF03109	BJD12_22140
BJD12_22145	PF00717	Peptidase S24-like
BJD12_22145	PF01726	LexA DNA binding domain
BJD12_22150	PF00154	recA bacterial DNA recombination protein
BJD12_22155	PF02631	RecX family
BJD12_22160	PF01411	tRNA synthetases class II (A)
BJD12_22160	PF02272	DHHA1 domain
BJD12_22160	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BJD12_22165	PF02599	Global regulator protein family
BJD12_22175	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BJD12_22175	PF08447	PAS fold
BJD12_22175	PF13426	PAS domain
BJD12_22180	PF02678	Pirin
BJD12_22185	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_22185	PF03466	LysR substrate binding domain
BJD12_22190	PF00581	Rhodanese-like domain
BJD12_22190	PF09335	BJD12_22190
BJD12_22205	PF12146	Putative lysophospholipase
BJD12_22210	PF08543	Phosphomethylpyrimidine kinase
BJD12_22215	PF06912	BJD12_22215
BJD12_22225	PF02562	PhoH-like protein
BJD12_22225	PF13638	PIN domain
BJD12_22230	PF00578	AhpC/TSA family
BJD12_22235	PF06877	Regulator of ribonuclease activity B
BJD12_22240	PF13740	ACT domain
BJD12_22245	PF00701	Dihydrodipicolinate synthetase family
BJD12_22255	PF00037	4Fe-4S binding domain
BJD12_22255	PF11953	Domain of unknown function (DUF3470)
BJD12_22260	PF05035	2-keto-3-deoxy-galactonokinase
BJD12_22265	PF08450	SMP-30/Gluconolaconase/LRE-like region
BJD12_22270	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
BJD12_22270	PF13378	Enolase C-terminal domain-like
BJD12_22275	PF01081	KDPG and KHG aldolase
BJD12_22285	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BJD12_22285	PF03466	LysR substrate binding domain
BJD12_22290	PF00593	TonB dependent receptor
BJD12_22290	PF07715	TonB-dependent Receptor Plug Domain
BJD12_22295	PF00593	TonB dependent receptor
BJD12_22295	PF07715	TonB-dependent Receptor Plug Domain
BJD12_22305	PF03629	Domain of unknown function (DUF303)
BJD12_22305	PF13364	Beta-galactosidase jelly roll domain
BJD12_22315	PF01055	Glycosyl hydrolases family 31
BJD12_22315	PF07691	PA14 domain
BJD12_22315	PF16338	BJD12_22315
BJD12_22315	PF17137	BJD12_22315
BJD12_22320	PF14498	Glycosyl hydrolase family 65, N-terminal domain
BJD12_22325	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BJD12_22325	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BJD12_22335	PF00083	Sugar (and other) transporter
BJD12_22340	PF05231	BJD12_22340
BJD12_22355	PF01520	N-acetylmuramoyl-L-alanine amidase
BJD12_22355	PF11741	AMIN domain
BJD12_22360	PF02649	Type I GTP cyclohydrolase folE2
BJD12_22370	PF01743	Poly A polymerase head domain
BJD12_22370	PF12626	Polymerase A arginine-rich C-terminus
BJD12_22370	PF12627	Probable RNA and SrmB- binding site of polymerase A
BJD12_22375	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
BJD12_22395	PF09676	BJD12_22395
BJD12_22400	PF03743	Bacterial conjugation TrbI-like protein
BJD12_22405	PF03743	Bacterial conjugation TrbI-like protein
BJD12_22410	PF06586	BJD12_22410
BJD12_22415	PF05309	BJD12_22415
BJD12_22420	PF07178	BJD12_22420
BJD12_22435	PF07916	BJD12_22435
BJD12_22440	PF06122	BJD12_22440
BJD12_22445	PF13728	F plasmid transfer operon protein
BJD12_22465	PF02195	ParB-like nuclease domain
BJD12_22470	PF13614	AAA domain
BJD12_22475	PF07042	BJD12_22475
BJD12_22505	PF01343	Peptidase family S49
BJD12_22515	PF12705	PD-(D/E)XK nuclease superfamily
BJD12_22530	PF14549	DNA-binding transcriptional regulator Cro
BJD12_22580	PF01507	Phosphoadenosine phosphosulfate reductase family
BJD12_22600	PF02195	ParB-like nuclease domain
BJD12_22615	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BJD12_22630	PF06733	DEAD_2
BJD12_22630	PF13307	Helicase C-terminal domain
BJD12_22650	PF00072	Response regulator receiver domain
BJD12_22670	PF10411	Disulfide bond isomerase protein N-terminus
BJD12_22670	PF13098	Thioredoxin-like domain
BJD12_22675	PF03544	Gram-negative bacterial TonB protein C-terminal
BJD12_22690	PF13223	BJD12_22690
BJD12_22695	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
BJD12_22705	PF00216	Bacterial DNA-binding protein
BJD12_22710	PF02272	DHHA1 domain
BJD12_22725	PF04381	Putative exonuclease, RdgC
BJD12_22730	PF00565	Staphylococcal nuclease homologue
BJD12_22750	PF13180	PDZ domain
BJD12_22765	PF00176	SNF2 family N-terminal domain
BJD12_22765	PF00271	Helicase conserved C-terminal domain
BJD12_22765	PF05175	Methyltransferase small domain
BJD12_22780	PF00712	DNA polymerase III beta subunit, N-terminal domain
BJD12_22780	PF02767	DNA polymerase III beta subunit, central domain
BJD12_22780	PF02768	DNA polymerase III beta subunit, C-terminal domain
BJD12_22785	PF02195	ParB-like nuclease domain
BJD12_22795	PF14454	BJD12_22795
BJD12_22805	PF14460	BJD12_22805
BJD12_22810	PF09436	BJD12_22810
BJD12_22810	PF14464	Prokaryotic homologs of the JAB domain
BJD12_22815	PF00899	ThiF family
BJD12_22820	PF00436	Single-strand binding protein family
BJD12_22850	PF00271	Helicase conserved C-terminal domain
BJD12_22850	PF04851	Type III restriction enzyme, res subunit
BJD12_22855	PF08238	Sel1 repeat
BJD12_22860	PF07514	Putative helicase
BJD12_22865	PF10412	Type IV secretion-system coupling protein DNA-binding domain
BJD12_22865	PF12696	TraM recognition site of TraD and TraG
BJD12_22870	PF14348	BJD12_22870
BJD12_22880	PF13245	Part of AAA domain
BJD12_22880	PF13361	UvrD-like helicase C-terminal domain
BJD12_22900	PF00436	Single-strand binding protein family
BJD12_22910	PF12705	PD-(D/E)XK nuclease superfamily
BJD12_22920	PF07728	AAA domain (dynein-related subfamily)
BJD12_22930	PF11348	BJD12_22930
BJD12_22935	PF00092	von Willebrand factor type A domain
BJD12_22940	PF08273	Zinc-binding domain of primase-helicase
BJD12_22940	PF13362	Toprim domain
BJD12_22950	PF11412	Disulphide bond corrector protein DsbC
BJD12_22955	PF00580	UvrD/REP helicase N-terminal domain
BJD12_22955	PF13361	UvrD-like helicase C-terminal domain
BJD12_22980	PF07791	BJD12_22980
BJD12_22995	PF01526	BJD12_22995
BJD12_22995	PF13700	BJD12_22995
BJD12_23000	PF00589	Phage integrase family
BJD12_23005	PF00376	MerR family regulatory protein
BJD12_23005	PF09278	MerR, DNA binding
BJD12_23010	PF01545	Cation efflux family
BJD12_23020	PF02321	Outer membrane efflux protein
BJD12_23025	PF16576	BJD12_23025
BJD12_23040	PF02040	BJD12_23040
BJD12_23045	PF03358	NADPH-dependent FMN reductase
BJD12_23050	PF03960	ArsC family
BJD12_23055	PF01451	Low molecular weight phosphotyrosine protein phosphatase
BJD12_23060	PF12840	Helix-turn-helix domain
BJD12_23065	PF13245	Part of AAA domain
BJD12_23070	PF13304	AAA domain
BJD12_23070	PF13476	AAA domain
BJD12_23075	PF11740	BJD12_23075
BJD12_23085	PF13560	Helix-turn-helix domain
BJD12_23095	PF00394	Multicopper oxidase
BJD12_23095	PF07731	Multicopper oxidase
BJD12_23095	PF07732	Multicopper oxidase
BJD12_23100	PF05275	BJD12_23100
BJD12_23105	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
BJD12_23110	PF13474	SnoaL-like domain
BJD12_23115	PF04214	BJD12_23115
BJD12_23125	PF04234	CopC domain
BJD12_23130	PF05425	BJD12_23130
BJD12_23135	PF00122	E1-E2 ATPase
BJD12_23135	PF00702	haloacid dehalogenase-like hydrolase
BJD12_23135	PF04945	YHS domain
BJD12_23140	PF13202	EF hand
BJD12_23145	PF03713	Domain of unknown function (DUF305)
BJD12_23150	PF00491	Arginase family
BJD12_23155	PF00593	TonB dependent receptor
BJD12_23160	PF10670	BJD12_23160
BJD12_23165	PF00873	AcrB/AcrD/AcrF family
BJD12_23170	PF16576	BJD12_23170
BJD12_23175	PF02321	Outer membrane efflux protein
BJD12_23190	PF16473	BJD12_23190
BJD12_23225	PF00589	Phage integrase family
BJD12_23250	PF05231	BJD12_23250
BJD12_23260	PF08808	BJD12_23260
BJD12_23290	PF03160	Calx-beta domain
BJD12_23290	PF06986	BJD12_23290
BJD12_23295	PF06834	BJD12_23295
BJD12_23300	PF09673	BJD12_23300
BJD12_23305	PF10502	Signal peptidase, peptidase S26
BJD12_23335	PF01936	NYN domain
BJD12_23375	PF13276	BJD12_23375
BJD12_23375	PF13683	BJD12_23375
BJD12_23380	PF01527	Transposase
BJD12_23400	PF01131	DNA topoisomerase
BJD12_23400	PF01751	Toprim domain
BJD12_23420	PF03743	Bacterial conjugation TrbI-like protein
BJD12_23425	PF03524	Conjugal transfer protein
BJD12_23430	PF04335	VirB8 protein
BJD12_23435	PF04610	BJD12_23435
BJD12_23445	PF03135	BJD12_23445
BJD12_23445	PF05872	BJD12_23445
BJD12_23450	PF05101	BJD12_23450
BJD12_23455	PF04956	BJD12_23455
BJD12_23460	PF00437	Type II/IV secretion system protein
BJD12_23465	PF13560	Helix-turn-helix domain
BJD12_23485	PF07519	Tannase and feruloyl esterase
BJD12_23495	PF07929	Plasmid pRiA4b ORF-3-like protein
BJD12_23505	PF02534	Type IV secretory system Conjugative DNA transfer
BJD12_23510	PF03432	BJD12_23510
BJD12_23510	PF11843	BJD12_23510
BJD12_23515	PF01464	Transglycosylase SLT domain
BJD12_23520	PF10502	Signal peptidase, peptidase S26
BJD12_23525	PF11000	BJD12_23525
BJD12_23535	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
BJD12_23540	PF11740	BJD12_23540
BJD12_23595	PF03421	BJD12_23595