locus-tag class description BI313_00020 PF06834 TraU protein BI313_00120 PF13614 AAA domain BI313_00280 PF06733 DEAD_2 BI313_00280 PF13307 Helicase C-terminal domain BI313_00290 PF01966 HD domain BI313_00300 PF00486 Transcriptional regulatory protein, C terminal BI313_00300 PF00072 Response regulator receiver domain BI313_00320 PF13098 Thioredoxin-like domain BI313_00320 PF10411 Disulfide bond isomerase protein N-terminus BI313_00345 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BI313_00345 PF10135 Rod binding protein BI313_00360 PF01368 DHH family BI313_00360 PF02272 DHHA1 domain BI313_00360 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BI313_00360 PF17768 RecJ OB domain BI313_00375 PF04381 Putative exonuclease, RdgC BI313_00380 PF00565 Staphylococcal nuclease homologue BI313_00440 PF02195 ParB-like nuclease domain BI313_00440 PF17762 HTH domain found in ParB protein BI313_00475 PF00436 Single-strand binding protein family BI313_00500 PF00271 Helicase conserved C-terminal domain BI313_00500 PF04851 Type III restriction enzyme, res subunit BI313_00530 PF00580 UvrD/REP helicase N-terminal domain BI313_00530 PF13361 UvrD-like helicase C-terminal domain BI313_00600 PF02683 Cytochrome C biogenesis protein transmembrane region BI313_00600 PF11412 Disulphide bond corrector protein DsbC BI313_00605 PF13361 UvrD-like helicase C-terminal domain BI313_00605 PF00580 UvrD/REP helicase N-terminal domain BI313_00690 PF00717 Peptidase S24-like BI313_00695 PF11798 IMS family HHH motif BI313_00695 PF13438 Domain of unknown function (DUF4113) BI313_00695 PF11799 impB/mucB/samB family C-terminal domain BI313_00695 PF00817 impB/mucB/samB family BI313_00720 PF00529 HlyD membrane-fusion protein of T1SS BI313_00720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI313_00725 PF00873 AcrB/AcrD/AcrF family BI313_00740 PF00491 Arginase family BI313_00755 PF04945 YHS domain BI313_00760 PF05425 Copper resistance protein D BI313_00790 PF05275 Copper resistance protein B precursor (CopB) BI313_00795 PF07731 Multicopper oxidase BI313_00795 PF07732 Multicopper oxidase BI313_00795 PF00394 Multicopper oxidase BI313_00820 PF13175 AAA ATPase domain BI313_00835 PF01451 Low molecular weight phosphotyrosine protein phosphatase BI313_00840 PF03960 ArsC family BI313_00845 PF03358 NADPH-dependent FMN reductase BI313_00850 PF02040 Arsenical pump membrane protein BI313_00860 PF00873 AcrB/AcrD/AcrF family BI313_00885 PF09278 MerR, DNA binding BI313_00885 PF00376 MerR family regulatory protein BI313_00895 PF13700 Domain of unknown function (DUF4158) BI313_00895 PF01526 Tn3 transposase DDE domain BI313_01010 PF03421 YopJ Serine/Threonine acetyltransferase BI313_01035 PF09722 Protein of unknown function (DUF2384) BI313_01035 PF01936 NYN domain BI313_01090 PF01751 Toprim domain BI313_01090 PF01131 DNA topoisomerase BI313_01110 PF03743 Bacterial conjugation TrbI-like protein BI313_01125 PF04610 TrbL/VirB6 plasmid conjugal transfer protein BI313_01135 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BI313_01150 PF00437 Type II/IV secretion system protein BI313_01190 PF02534 Type IV secretory system Conjugative DNA transfer BI313_01200 PF01464 Transglycosylase SLT domain BI313_01285 PF08448 PAS fold BI313_01285 PF00990 Diguanylate cyclase, GGDEF domain BI313_01300 PF00082 Subtilase family BI313_01305 PF01668 SmpB protein BI313_01315 PF03658 RnfH family Ubiquitin BI313_01320 PF04355 SmpA / OmlA family BI313_01325 PF01475 Ferric uptake regulator family BI313_01330 PF02463 RecF/RecN/SMC N terminal domain BI313_01335 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding BI313_01335 PF01628 HrcA protein C terminal domain BI313_01340 PF01025 GrpE BI313_01345 PF00012 Hsp70 protein BI313_01350 PF00684 DnaJ central domain BI313_01350 PF01556 DnaJ C terminal domain BI313_01350 PF00226 DnaJ domain BI313_01355 PF08543 Phosphomethylpyrimidine kinase BI313_01380 PF00005 ABC transporter BI313_01380 PF00664 ABC transporter transmembrane region BI313_01380 PF03412 Peptidase C39 family BI313_01385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_01385 PF03466 LysR substrate binding domain BI313_01390 PF00664 ABC transporter transmembrane region BI313_01390 PF00005 ABC transporter BI313_01395 PF01205 Uncharacterized protein family UPF0029 BI313_01400 PF03641 Possible lysine decarboxylase BI313_01405 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI313_01405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BI313_01410 PF02817 e3 binding domain BI313_01410 PF00364 Biotin-requiring enzyme BI313_01410 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BI313_01415 PF16870 2-oxoglutarate dehydrogenase C-terminal BI313_01415 PF02779 Transketolase, pyrimidine binding domain BI313_01415 PF00676 Dehydrogenase E1 component BI313_01415 PF16078 2-oxoglutarate dehydrogenase N-terminus BI313_01425 PF08007 Cupin superfamily protein BI313_01435 PF08328 Adenylosuccinate lyase C-terminal BI313_01435 PF00206 Lyase BI313_01440 PF03471 Transporter associated domain BI313_01440 PF01595 Cyclin M transmembrane N-terminal domain BI313_01440 PF00571 CBS domain BI313_01445 PF10415 Fumarase C C-terminus BI313_01445 PF00206 Lyase BI313_01470 PF00005 ABC transporter BI313_01475 PF00392 Bacterial regulatory proteins, gntR family BI313_01485 PF00255 Glutathione peroxidase BI313_01490 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BI313_01490 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BI313_01495 PF04102 SlyX BI313_01505 PF01757 Acyltransferase family BI313_01520 PF00356 Bacterial regulatory proteins, lacI family BI313_01525 PF07690 Major Facilitator Superfamily BI313_01530 PF00294 pfkB family carbohydrate kinase BI313_01540 PF02310 B12 binding domain BI313_01540 PF02607 B12 binding domain BI313_01540 PF02965 Vitamin B12 dependent methionine synthase, activation domain BI313_01540 PF00809 Pterin binding enzyme BI313_01540 PF02574 Homocysteine S-methyltransferase BI313_01545 PF00809 Pterin binding enzyme BI313_01545 PF02574 Homocysteine S-methyltransferase BI313_01550 PF01209 ubiE/COQ5 methyltransferase family BI313_01555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI313_01555 PF02770 Acyl-CoA dehydrogenase, middle domain BI313_01555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI313_01570 PF00575 S1 RNA binding domain BI313_01570 PF00773 RNB domain BI313_01570 PF08206 Ribonuclease B OB domain BI313_01570 PF17876 Cold shock domain BI313_01570 PF08461 Ribonuclease R winged-helix domain BI313_01580 PF08032 RNA 2'-O ribose methyltransferase substrate binding BI313_01580 PF00588 SpoU rRNA Methylase family BI313_01585 PF07694 5TMR of 5TMR-LYT BI313_01585 PF00990 Diguanylate cyclase, GGDEF domain BI313_01590 PF00929 Exonuclease BI313_01600 PF01895 PhoU domain BI313_01605 PF00005 ABC transporter BI313_01610 PF00528 Binding-protein-dependent transport system inner membrane component BI313_01615 PF00528 Binding-protein-dependent transport system inner membrane component BI313_01620 PF12849 PBP superfamily domain BI313_01625 PF12849 PBP superfamily domain BI313_01640 PF00484 Carbonic anhydrase BI313_01645 PF01740 STAS domain BI313_01645 PF00916 Sulfate permease family BI313_01650 PF10576 Iron-sulfur binding domain of endonuclease III BI313_01650 PF00730 HhH-GPD superfamily base excision DNA repair protein BI313_01650 PF00633 Helix-hairpin-helix motif BI313_01660 PF00378 Enoyl-CoA hydratase/isomerase BI313_01665 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BI313_01665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BI313_01670 PF00293 NUDIX domain BI313_01675 PF00581 Rhodanese-like domain BI313_01720 PF02926 THUMP domain BI313_01720 PF01170 Putative RNA methylase family UPF0020 BI313_01720 PF10672 S-adenosylmethionine-dependent methyltransferase BI313_01730 PF01513 ATP-NAD kinase BI313_01755 PF08411 Exonuclease C-terminal BI313_01755 PF00929 Exonuclease BI313_01760 PF01494 FAD binding domain BI313_01765 PF00266 Aminotransferase class-V BI313_01775 PF06052 3-hydroxyanthranilic acid dioxygenase BI313_01780 PF00484 Carbonic anhydrase BI313_01805 PF01336 OB-fold nucleic acid binding domain BI313_01805 PF00152 tRNA synthetases class II (D, K and N) BI313_01810 PF01521 Iron-sulphur cluster biosynthesis BI313_01815 PF01250 Ribosomal protein S6 BI313_01820 PF01084 Ribosomal protein S18 BI313_01825 PF03948 Ribosomal protein L9, C-terminal domain BI313_01825 PF01281 Ribosomal protein L9, N-terminal domain BI313_01830 PF02463 RecF/RecN/SMC N terminal domain BI313_01835 PF04354 ZipA, C-terminal FtsZ-binding domain BI313_01845 PF00155 Aminotransferase class I and II BI313_01850 PF00533 BRCA1 C Terminus (BRCT) domain BI313_01850 PF01653 NAD-dependent DNA ligase adenylation domain BI313_01850 PF03120 NAD-dependent DNA ligase OB-fold domain BI313_01850 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BI313_01850 PF12826 Helix-hairpin-helix motif BI313_01855 PF00152 tRNA synthetases class II (D, K and N) BI313_01880 PF01008 Initiation factor 2 subunit family BI313_01885 PF00521 DNA gyrase/topoisomerase IV, subunit A BI313_01885 PF03989 DNA gyrase C-terminal domain, beta-propeller BI313_01890 PF13360 PQQ-like domain BI313_01905 PF01175 Urocanase Rossmann-like domain BI313_01905 PF17392 Urocanase C-terminal domain BI313_01905 PF17391 Urocanase N-terminal domain BI313_01915 PF00221 Aromatic amino acid lyase BI313_01920 PF07969 Amidohydrolase family BI313_01955 PF01794 Ferric reductase like transmembrane component BI313_01960 PF00174 Oxidoreductase molybdopterin binding domain BI313_01965 PF00266 Aminotransferase class-V BI313_01970 PF01817 Chorismate mutase type II BI313_01970 PF00800 Prephenate dehydratase BI313_01970 PF01842 ACT domain BI313_01975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BI313_01985 PF03544 Gram-negative bacterial TonB protein C-terminal BI313_01990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BI313_01990 PF02403 Seryl-tRNA synthetase N-terminal domain BI313_01995 PF02525 Flavodoxin-like fold BI313_02000 PF03466 LysR substrate binding domain BI313_02000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_02040 PF00005 ABC transporter BI313_02045 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BI313_02070 PF04002 RadC-like JAB domain BI313_02085 PF13276 HTH-like domain BI313_02085 PF00665 Integrase core domain BI313_02085 PF13333 Integrase core domain BI313_02090 PF01527 Transposase BI313_02105 PF01555 DNA methylase BI313_02240 PF02203 Tar ligand binding domain homologue BI313_02240 PF00672 HAMP domain BI313_02240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_02245 PF13188 PAS domain BI313_02245 PF08448 PAS fold BI313_02245 PF00072 Response regulator receiver domain BI313_02245 PF00512 His Kinase A (phospho-acceptor) domain BI313_02245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_02250 PF03861 ANTAR domain BI313_02250 PF00072 Response regulator receiver domain BI313_02255 PF06745 KaiC BI313_02260 PF13426 PAS domain BI313_02260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_02260 PF00072 Response regulator receiver domain BI313_02270 PF03918 Cytochrome C biogenesis protein BI313_02275 PF08534 Redoxin BI313_02280 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BI313_02280 PF01578 Cytochrome C assembly protein BI313_02285 PF03100 CcmE BI313_02290 PF04995 Heme exporter protein D (CcmD) BI313_02295 PF01578 Cytochrome C assembly protein BI313_02300 PF00082 Subtilase family BI313_02310 PF04542 Sigma-70 region 2 BI313_02310 PF08281 Sigma-70, region 4 BI313_02320 PF00034 Cytochrome c BI313_02335 PF05523 WxcM-like, C-terminal BI313_02340 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BI313_02345 PF01943 Polysaccharide biosynthesis protein BI313_02350 PF00535 Glycosyl transferase family 2 BI313_02375 PF13382 Adenine deaminase C-terminal domain BI313_02375 PF01979 Amidohydrolase family BI313_02380 PF13649 Methyltransferase domain BI313_02390 PF13579 Glycosyl transferase 4-like domain BI313_02390 PF00534 Glycosyl transferases group 1 BI313_02405 PF00005 ABC transporter BI313_02410 PF00664 ABC transporter transmembrane region BI313_02410 PF00005 ABC transporter BI313_02415 PF07690 Major Facilitator Superfamily BI313_02420 PF00296 Luciferase-like monooxygenase BI313_02435 PF01595 Cyclin M transmembrane N-terminal domain BI313_02435 PF00571 CBS domain BI313_02435 PF03471 Transporter associated domain BI313_02450 PF01384 Phosphate transporter family BI313_02455 PF02698 DUF218 domain BI313_02465 PF02611 CDP-diacylglycerol pyrophosphatase BI313_02470 PF00204 DNA gyrase B BI313_02470 PF01751 Toprim domain BI313_02470 PF00986 DNA gyrase B subunit, carboxyl terminus BI313_02470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_02480 PF00117 Glutamine amidotransferase class-I BI313_02480 PF06418 CTP synthase N-terminus BI313_02485 PF00793 DAHP synthetase I family BI313_02495 PF00113 Enolase, C-terminal TIM barrel domain BI313_02495 PF03952 Enolase, N-terminal domain BI313_02500 PF04977 Septum formation initiator BI313_02505 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BI313_02510 PF02542 YgbB family BI313_02515 PF01142 tRNA pseudouridine synthase D (TruD) BI313_02520 PF01713 Smr domain BI313_02525 PF01975 Survival protein SurE BI313_02535 PF09335 SNARE associated Golgi protein BI313_02540 PF01551 Peptidase family M23 BI313_02540 PF01476 LysM domain BI313_02545 PF04430 Protein of unknown function (DUF498/DUF598) BI313_02550 PF01985 CRS1 / YhbY (CRM) domain BI313_02555 PF01728 FtsJ-like methyltransferase BI313_02560 PF00004 ATPase family associated with various cellular activities (AAA) BI313_02560 PF17862 AAA+ lid domain BI313_02560 PF06480 FtsH Extracellular BI313_02560 PF01434 Peptidase family M41 BI313_02565 PF00809 Pterin binding enzyme BI313_02575 PF17209 Hfq protein BI313_02580 PF16360 GTP-binding GTPase Middle Region BI313_02580 PF13167 GTP-binding GTPase N-terminal BI313_02580 PF01926 50S ribosome-binding GTPase BI313_02585 PF02464 Competence-damaged protein BI313_02590 PF00593 TonB dependent receptor BI313_02590 PF07715 TonB-dependent Receptor Plug Domain BI313_02595 PF03109 ABC1 family BI313_02600 PF00717 Peptidase S24-like BI313_02600 PF01726 LexA DNA binding domain BI313_02605 PF00154 recA bacterial DNA recombination protein BI313_02610 PF02631 RecX family BI313_02615 PF02272 DHHA1 domain BI313_02615 PF01411 tRNA synthetases class II (A) BI313_02615 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BI313_02620 PF02599 Global regulator protein family BI313_02630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_02630 PF08447 PAS fold BI313_02630 PF13426 PAS domain BI313_02635 PF02678 Pirin BI313_02635 PF17954 Quercetinase C-terminal cupin domain BI313_02640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_02640 PF03466 LysR substrate binding domain BI313_02665 PF02581 Thiamine monophosphate synthase BI313_02665 PF08543 Phosphomethylpyrimidine kinase BI313_02680 PF13638 PIN domain BI313_02680 PF02562 PhoH-like protein BI313_02685 PF00578 AhpC/TSA family BI313_02700 PF00701 Dihydrodipicolinate synthetase family BI313_02710 PF11953 Domain of unknown function (DUF3470) BI313_02710 PF00037 4Fe-4S binding domain BI313_02715 PF05035 2-keto-3-deoxy-galactonokinase BI313_02720 PF08450 SMP-30/Gluconolactonase/LRE-like region BI313_02725 PF13378 Enolase C-terminal domain-like BI313_02725 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BI313_02730 PF01081 KDPG and KHG aldolase BI313_02740 PF03466 LysR substrate binding domain BI313_02740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_02755 PF03442 Carbohydrate binding domain X2 BI313_02755 PF00942 Cellulose binding domain BI313_02765 PF08533 Beta-galactosidase C-terminal domain BI313_02765 PF08532 Beta-galactosidase trimerisation domain BI313_02765 PF02449 Beta-galactosidase BI313_02770 PF01055 Glycosyl hydrolases family 31 BI313_02770 PF17137 Domain of unknown function (DUF5110) BI313_02770 PF16338 Domain of unknown function (DUF4968) BI313_02780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BI313_02780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BI313_02790 PF00083 Sugar (and other) transporter BI313_02810 PF01520 N-acetylmuramoyl-L-alanine amidase BI313_02815 PF02649 Type I GTP cyclohydrolase folE2 BI313_02825 PF12626 Polymerase A arginine-rich C-terminus BI313_02825 PF12627 Probable RNA and SrmB- binding site of polymerase A BI313_02825 PF01743 Poly A polymerase head domain BI313_02830 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BI313_02835 PF02548 Ketopantoate hydroxymethyltransferase BI313_02840 PF02569 Pantoate-beta-alanine ligase BI313_02845 PF02261 Aspartate decarboxylase BI313_02850 PF00342 Phosphoglucose isomerase BI313_02880 PF00933 Glycosyl hydrolase family 3 N terminal domain BI313_02880 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI313_02880 PF14310 Fibronectin type III-like domain BI313_02890 PF00474 Sodium:solute symporter family BI313_02895 PF00990 Diguanylate cyclase, GGDEF domain BI313_02895 PF00360 Phytochrome region BI313_02895 PF00563 EAL domain BI313_02895 PF01590 GAF domain BI313_02905 PF00072 Response regulator receiver domain BI313_02915 PF04551 GcpE protein BI313_02920 PF01569 PAP2 superfamily BI313_02925 PF07690 Major Facilitator Superfamily BI313_02930 PF01177 Asp/Glu/Hydantoin racemase BI313_02935 PF00892 EamA-like transporter family BI313_02940 PF01565 FAD binding domain BI313_02940 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BI313_02945 PF01180 Dihydroorotate dehydrogenase BI313_02960 PF00171 Aldehyde dehydrogenase family BI313_02995 PF04002 RadC-like JAB domain BI313_03015 PF05114 Protein of unknown function (DUF692) BI313_03065 PF01527 Transposase BI313_03070 PF00665 Integrase core domain BI313_03070 PF13333 Integrase core domain BI313_03070 PF13276 HTH-like domain BI313_03100 PF00672 HAMP domain BI313_03100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_03105 PF00672 HAMP domain BI313_03105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_03105 PF02203 Tar ligand binding domain homologue BI313_03115 PF00535 Glycosyl transferase family 2 BI313_03120 PF14883 Hypothetical glycosyl hydrolase family 13 BI313_03120 PF01522 Polysaccharide deacetylase BI313_03150 PF01527 Transposase BI313_03155 PF13276 HTH-like domain BI313_03155 PF13683 Integrase core domain BI313_03200 PF13683 Integrase core domain BI313_03200 PF13276 HTH-like domain BI313_03205 PF01527 Transposase BI313_03210 PF03073 TspO/MBR family BI313_03220 PF00696 Amino acid kinase family BI313_03220 PF00742 Homoserine dehydrogenase BI313_03220 PF03447 Homoserine dehydrogenase, NAD binding domain BI313_03220 PF13840 ACT domain BI313_03220 PF01842 ACT domain BI313_03225 PF00288 GHMP kinases N terminal domain BI313_03225 PF08544 GHMP kinases C terminal BI313_03235 PF14821 Threonine synthase N terminus BI313_03235 PF00291 Pyridoxal-phosphate dependent enzyme BI313_03245 PF00027 Cyclic nucleotide-binding domain BI313_03245 PF13545 Crp-like helix-turn-helix domain BI313_03250 PF03129 Anticodon binding domain BI313_03250 PF13393 Histidyl-tRNA synthetase BI313_03260 PF01634 ATP phosphoribosyltransferase BI313_03260 PF08029 HisG, C-terminal domain BI313_03265 PF00815 Histidinol dehydrogenase BI313_03270 PF00155 Aminotransferase class I and II BI313_03275 PF00475 Imidazoleglycerol-phosphate dehydratase BI313_03280 PF00117 Glutamine amidotransferase class-I BI313_03285 PF00977 Histidine biosynthesis protein BI313_03290 PF00977 Histidine biosynthesis protein BI313_03295 PF01502 Phosphoribosyl-AMP cyclohydrolase BI313_03295 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BI313_03320 PF03079 ARD/ARD' family BI313_03325 PF00596 Class II Aldolase and Adducin N-terminal domain BI313_03335 PF13520 Amino acid permease BI313_03340 PF13520 Amino acid permease BI313_03350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BI313_03350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BI313_03355 PF02913 FAD linked oxidases, C-terminal domain BI313_03355 PF01565 FAD binding domain BI313_03375 PF08207 Elongation factor P (EF-P) KOW-like domain BI313_03375 PF01132 Elongation factor P (EF-P) OB domain BI313_03375 PF09285 Elongation factor P, C-terminal BI313_03380 PF00106 short chain dehydrogenase BI313_03385 PF00682 HMGL-like BI313_03395 PF00378 Enoyl-CoA hydratase/isomerase BI313_03405 PF02421 Ferrous iron transport protein B BI313_03405 PF07664 Ferrous iron transport protein B C terminus BI313_03405 PF07670 Nucleoside recognition BI313_03420 PF00155 Aminotransferase class I and II BI313_03425 PF03475 3-alpha domain BI313_03425 PF03473 MOSC domain BI313_03430 PF01113 Dihydrodipicolinate reductase, N-terminus BI313_03430 PF05173 Dihydrodipicolinate reductase, C-terminus BI313_03435 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BI313_03435 PF00117 Glutamine amidotransferase class-I BI313_03445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BI313_03445 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BI313_03445 PF02142 MGS-like domain BI313_03450 PF01272 Transcription elongation factor, GreA/GreB, C-term BI313_03450 PF03449 Transcription elongation factor, N-terminal BI313_03460 PF17768 RecJ OB domain BI313_03460 PF01368 DHH family BI313_03460 PF02272 DHHA1 domain BI313_03475 PF00072 Response regulator receiver domain BI313_03475 PF04397 LytTr DNA-binding domain BI313_03480 PF00472 RF-1 domain BI313_03480 PF03462 PCRF domain BI313_03485 PF00152 tRNA synthetases class II (D, K and N) BI313_03485 PF01336 OB-fold nucleic acid binding domain BI313_03490 PF00072 Response regulator receiver domain BI313_03495 PF00512 His Kinase A (phospho-acceptor) domain BI313_03495 PF01627 Hpt domain BI313_03495 PF00072 Response regulator receiver domain BI313_03495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_03500 PF01627 Hpt domain BI313_03500 PF00512 His Kinase A (phospho-acceptor) domain BI313_03500 PF00072 Response regulator receiver domain BI313_03500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_03505 PF00378 Enoyl-CoA hydratase/isomerase BI313_03510 PF00501 AMP-binding enzyme BI313_03510 PF13193 AMP-binding enzyme C-terminal domain BI313_03520 PF00694 Aconitase C-terminal domain BI313_03520 PF00330 Aconitase family (aconitate hydratase) BI313_03535 PF11791 Aconitate B N-terminal domain BI313_03535 PF06434 Aconitate hydratase 2 N-terminus BI313_03535 PF00330 Aconitase family (aconitate hydratase) BI313_03540 PF00561 alpha/beta hydrolase fold BI313_03545 PF00563 EAL domain BI313_03545 PF00990 Diguanylate cyclase, GGDEF domain BI313_03545 PF03707 Bacterial signalling protein N terminal repeat BI313_03550 PF00072 Response regulator receiver domain BI313_03550 PF01339 CheB methylesterase BI313_03555 PF03975 CheD chemotactic sensory transduction BI313_03560 PF01739 CheR methyltransferase, SAM binding domain BI313_03560 PF03705 CheR methyltransferase, all-alpha domain BI313_03565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_03565 PF00672 HAMP domain BI313_03565 PF02203 Tar ligand binding domain homologue BI313_03575 PF01584 CheW-like domain BI313_03580 PF07317 Flagellar regulator YcgR BI313_03580 PF07238 PilZ domain BI313_03590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_03590 PF02203 Tar ligand binding domain homologue BI313_03590 PF00672 HAMP domain BI313_03595 PF02203 Tar ligand binding domain homologue BI313_03595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_03595 PF00672 HAMP domain BI313_03600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_03600 PF02203 Tar ligand binding domain homologue BI313_03600 PF00672 HAMP domain BI313_03605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_03605 PF00672 HAMP domain BI313_03610 PF00672 HAMP domain BI313_03610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_03610 PF02203 Tar ligand binding domain homologue BI313_03630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_03630 PF00672 HAMP domain BI313_03630 PF17200 Single Cache domain 2 BI313_03640 PF00672 HAMP domain BI313_03640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_03645 PF01584 CheW-like domain BI313_03645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_03645 PF02895 Signal transducing histidine kinase, homodimeric domain BI313_03645 PF01627 Hpt domain BI313_03645 PF09078 CheY binding BI313_03650 PF00072 Response regulator receiver domain BI313_03660 PF01584 CheW-like domain BI313_03665 PF13614 AAA domain BI313_03670 PF00691 OmpA family BI313_03670 PF13677 Membrane MotB of proton-channel complex MotA/MotB BI313_03675 PF01618 MotA/TolQ/ExbB proton channel family BI313_03700 PF13276 HTH-like domain BI313_03700 PF00665 Integrase core domain BI313_03700 PF13333 Integrase core domain BI313_03705 PF01527 Transposase BI313_03755 PF01584 CheW-like domain BI313_03755 PF02895 Signal transducing histidine kinase, homodimeric domain BI313_03755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_03755 PF01627 Hpt domain BI313_03755 PF07194 P2 response regulator binding domain BI313_03760 PF04344 Chemotaxis phosphatase, CheZ BI313_03765 PF00072 Response regulator receiver domain BI313_03770 PF04539 Sigma-70 region 3 BI313_03770 PF04542 Sigma-70 region 2 BI313_03770 PF04545 Sigma-70, region 4 BI313_03775 PF10609 NUBPL iron-transfer P-loop NTPase BI313_03780 PF00448 SRP54-type protein, GTPase domain BI313_03785 PF00771 FHIPEP family BI313_03790 PF01312 FlhB HrpN YscU SpaS Family BI313_03795 PF00563 EAL domain BI313_03795 PF00990 Diguanylate cyclase, GGDEF domain BI313_03795 PF03707 Bacterial signalling protein N terminal repeat BI313_03800 PF00990 Diguanylate cyclase, GGDEF domain BI313_03800 PF00563 EAL domain BI313_03800 PF03707 Bacterial signalling protein N terminal repeat BI313_03800 PF13188 PAS domain BI313_03805 PF01311 Bacterial export proteins, family 1 BI313_03810 PF01313 Bacterial export proteins, family 3 BI313_03815 PF00813 FliP family BI313_03820 PF04347 Flagellar biosynthesis protein, FliO BI313_03825 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BI313_03830 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BI313_03830 PF02154 Flagellar motor switch protein FliM BI313_03850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI313_03850 PF18269 T3SS EscN ATPase C-terminal domain BI313_03860 PF14841 FliG middle domain BI313_03860 PF14842 FliG N-terminal domain BI313_03860 PF01706 FliG C-terminal domain BI313_03865 PF01514 Secretory protein of YscJ/FliF family BI313_03865 PF08345 Flagellar M-ring protein C-terminal BI313_03870 PF02049 Flagellar hook-basal body complex protein FliE BI313_03885 PF00535 Glycosyl transferase family 2 BI313_03885 PF00534 Glycosyl transferases group 1 BI313_03930 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BI313_03930 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BI313_03940 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BI313_03945 PF00158 Sigma-54 interaction domain BI313_03945 PF02954 Bacterial regulatory protein, Fis family BI313_03945 PF00072 Response regulator receiver domain BI313_03950 PF01339 CheB methylesterase BI313_03950 PF00072 Response regulator receiver domain BI313_03955 PF00309 Sigma-54 factor, Activator interacting domain (AID) BI313_03955 PF04963 Sigma-54 factor, core binding domain BI313_03955 PF04552 Sigma-54, DNA binding domain BI313_03960 PF00196 Bacterial regulatory proteins, luxR family BI313_03960 PF00072 Response regulator receiver domain BI313_03975 PF02561 Flagellar protein FliS BI313_03980 PF02465 Flagellar hook-associated protein 2 N-terminus BI313_03980 PF07196 Flagellin hook IN motif BI313_03980 PF07195 Flagellar hook-associated protein 2 C-terminus BI313_03985 PF00700 Bacterial flagellin C-terminal helical region BI313_03985 PF00669 Bacterial flagellin N-terminal helical region BI313_03990 PF00669 Bacterial flagellin N-terminal helical region BI313_03990 PF00700 Bacterial flagellin C-terminal helical region BI313_03995 PF07196 Flagellin hook IN motif BI313_03995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI313_04000 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BI313_04000 PF10135 Rod binding protein BI313_04005 PF02119 Flagellar P-ring protein BI313_04010 PF02107 Flagellar L-ring protein BI313_04015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI313_04015 PF00460 Flagella basal body rod protein BI313_04030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI313_04030 PF00460 Flagella basal body rod protein BI313_04035 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI313_04035 PF00460 Flagella basal body rod protein BI313_04035 PF07559 Flagellar basal body protein FlaE BI313_04040 PF03963 Flagellar hook capping protein - N-terminal region BI313_04045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BI313_04045 PF00460 Flagella basal body rod protein BI313_04050 PF00460 Flagella basal body rod protein BI313_04055 PF00072 Response regulator receiver domain BI313_04055 PF01584 CheW-like domain BI313_04075 PF00512 His Kinase A (phospho-acceptor) domain BI313_04075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_04080 PF03707 Bacterial signalling protein N terminal repeat BI313_04080 PF00990 Diguanylate cyclase, GGDEF domain BI313_04080 PF00563 EAL domain BI313_04085 PF07730 Histidine kinase BI313_04085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_04090 PF00563 EAL domain BI313_04090 PF00990 Diguanylate cyclase, GGDEF domain BI313_04090 PF03707 Bacterial signalling protein N terminal repeat BI313_04105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_04105 PF12729 Four helix bundle sensory module for signal transduction BI313_04105 PF00672 HAMP domain BI313_04110 PF04356 Protein of unknown function (DUF489) BI313_04120 PF00293 NUDIX domain BI313_04125 PF02617 ATP-dependent Clp protease adaptor protein ClpS BI313_04130 PF00004 ATPase family associated with various cellular activities (AAA) BI313_04130 PF10431 C-terminal, D2-small domain, of ClpB protein BI313_04130 PF07724 AAA domain (Cdc48 subfamily) BI313_04130 PF17871 AAA lid domain BI313_04130 PF02861 Clp amino terminal domain, pathogenicity island component BI313_04140 PF01176 Translation initiation factor 1A / IF-1 BI313_04145 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BI313_04155 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI313_04160 PF17854 FtsK alpha domain BI313_04160 PF09397 Ftsk gamma domain BI313_04160 PF01580 FtsK/SpoIIIE family BI313_04160 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BI313_04170 PF03548 Outer membrane lipoprotein carrier protein LolA BI313_04175 PF12002 MgsA AAA+ ATPase C terminal BI313_04175 PF16193 AAA C-terminal domain BI313_04175 PF00004 ATPase family associated with various cellular activities (AAA) BI313_04180 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BI313_04185 PF00108 Thiolase, N-terminal domain BI313_04185 PF02803 Thiolase, C-terminal domain BI313_04190 PF00378 Enoyl-CoA hydratase/isomerase BI313_04190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BI313_04190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BI313_04200 PF00334 Nucleoside diphosphate kinase BI313_04205 PF04055 Radical SAM superfamily BI313_04215 PF13464 Domain of unknown function (DUF4115) BI313_04225 PF01011 PQQ enzyme repeat BI313_04225 PF13360 PQQ-like domain BI313_04230 PF01926 50S ribosome-binding GTPase BI313_04230 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BI313_04235 PF03453 MoeA N-terminal region (domain I and II) BI313_04235 PF00994 Probable molybdopterin binding domain BI313_04235 PF03454 MoeA C-terminal region (domain IV) BI313_04240 PF00899 ThiF family BI313_04255 PF03372 Endonuclease/Exonuclease/phosphatase family BI313_04265 PF03453 MoeA N-terminal region (domain I and II) BI313_04265 PF03454 MoeA C-terminal region (domain IV) BI313_04265 PF00994 Probable molybdopterin binding domain BI313_04270 PF12804 MobA-like NTP transferase domain BI313_04280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BI313_04280 PF14824 Sirohaem biosynthesis protein central BI313_04280 PF10414 Sirohaem synthase dimerisation region BI313_04285 PF03861 ANTAR domain BI313_04285 PF00072 Response regulator receiver domain BI313_04300 PF07690 Major Facilitator Superfamily BI313_04305 PF18267 Rubredoxin NAD+ reductase C-terminal domain BI313_04305 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI313_04305 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BI313_04305 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BI313_04305 PF04324 BFD-like [2Fe-2S] binding domain BI313_04310 PF00355 Rieske [2Fe-2S] domain BI313_04315 PF04324 BFD-like [2Fe-2S] binding domain BI313_04315 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BI313_04315 PF00384 Molybdopterin oxidoreductase BI313_04315 PF01568 Molydopterin dinucleotide binding domain BI313_04320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BI313_04330 PF05974 Domain of unknown function (DUF892) BI313_04340 PF08447 PAS fold BI313_04340 PF08448 PAS fold BI313_04340 PF00990 Diguanylate cyclase, GGDEF domain BI313_04340 PF00563 EAL domain BI313_04345 PF12951 Passenger-associated-transport-repeat BI313_04345 PF12951 Passenger-associated-transport-repeat BI313_04350 PF03797 Autotransporter beta-domain BI313_04350 PF00082 Subtilase family BI313_04370 PF07995 Glucose / Sorbosone dehydrogenase BI313_04385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BI313_04410 PF09335 SNARE associated Golgi protein BI313_04420 PF00440 Bacterial regulatory proteins, tetR family BI313_04430 PF07690 Major Facilitator Superfamily BI313_04435 PF00106 short chain dehydrogenase BI313_04460 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BI313_04460 PF02585 GlcNAc-PI de-N-acetylase BI313_04480 PF00732 GMC oxidoreductase BI313_04480 PF05199 GMC oxidoreductase BI313_04485 PF00106 short chain dehydrogenase BI313_04500 PF02627 Carboxymuconolactone decarboxylase family BI313_04515 PF03466 LysR substrate binding domain BI313_04515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_04530 PF01129 NAD:arginine ADP-ribosyltransferase BI313_04610 PF01527 Transposase BI313_04705 PF05857 TraX protein BI313_04730 PF01106 NifU-like domain BI313_04735 PF01329 Pterin 4 alpha carbinolamine dehydratase BI313_04745 PF02535 ZIP Zinc transporter BI313_04755 PF01479 S4 domain BI313_04755 PF00849 RNA pseudouridylate synthase BI313_04760 PF10150 Ribonuclease E/G family BI313_04760 PF00575 S1 RNA binding domain BI313_04760 PF12111 Polyribonucleotide phosphorylase C terminal BI313_04765 PF00196 Bacterial regulatory proteins, luxR family BI313_04765 PF00072 Response regulator receiver domain BI313_04780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BI313_04790 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BI313_04790 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BI313_04790 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BI313_04815 PF01066 CDP-alcohol phosphatidyltransferase BI313_04820 PF02151 UvrB/uvrC motif BI313_04820 PF08459 UvrC Helix-hairpin-helix N-terminal BI313_04820 PF01541 GIY-YIG catalytic domain BI313_04830 PF01451 Low molecular weight phosphotyrosine protein phosphatase BI313_04835 PF02348 Cytidylyltransferase BI313_04840 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BI313_04845 PF00664 ABC transporter transmembrane region BI313_04845 PF00005 ABC transporter BI313_04855 PF01618 MotA/TolQ/ExbB proton channel family BI313_04860 PF00753 Metallo-beta-lactamase superfamily BI313_04860 PF03772 Competence protein BI313_04875 PF00005 ABC transporter BI313_04880 PF02687 FtsX-like permease family BI313_04880 PF12704 MacB-like periplasmic core domain BI313_04890 PF03937 Flavinator of succinate dehydrogenase BI313_04895 PF13085 2Fe-2S iron-sulfur cluster binding domain BI313_04905 PF02910 Fumarate reductase flavoprotein C-term BI313_04905 PF00890 FAD binding domain BI313_04910 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BI313_04915 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BI313_04925 PF01571 Aminomethyltransferase folate-binding domain BI313_04930 PF17912 MalK OB fold domain BI313_04930 PF00005 ABC transporter BI313_04935 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BI313_04935 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BI313_04940 PF02685 Glucokinase BI313_04945 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BI313_04950 PF00920 Dehydratase family BI313_04955 PF01081 KDPG and KHG aldolase BI313_04960 PF00873 AcrB/AcrD/AcrF family BI313_04965 PF00873 AcrB/AcrD/AcrF family BI313_04970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI313_04980 PF00034 Cytochrome c BI313_05020 PF01627 Hpt domain BI313_05020 PF00672 HAMP domain BI313_05020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_05020 PF00512 His Kinase A (phospho-acceptor) domain BI313_05020 PF00072 Response regulator receiver domain BI313_05020 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BI313_05025 PF16921 Tex protein YqgF-like domain BI313_05025 PF00575 S1 RNA binding domain BI313_05025 PF09371 Tex-like protein N-terminal domain BI313_05025 PF17674 HHH domain BI313_05050 PF00561 alpha/beta hydrolase fold BI313_05060 PF01066 CDP-alcohol phosphatidyltransferase BI313_05080 PF03618 Kinase/pyrophosphorylase BI313_05085 PF00391 PEP-utilising enzyme, mobile domain BI313_05085 PF02896 PEP-utilising enzyme, TIM barrel domain BI313_05085 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BI313_05090 PF00924 Mechanosensitive ion channel BI313_05090 PF05552 Conserved TM helix BI313_05095 PF00929 Exonuclease BI313_05100 PF14437 MafB19-like deaminase BI313_05105 PF02742 Iron dependent repressor, metal binding and dimerisation domain BI313_05105 PF01325 Iron dependent repressor, N-terminal DNA binding domain BI313_05110 PF01566 Natural resistance-associated macrophage protein BI313_05115 PF00561 alpha/beta hydrolase fold BI313_05135 PF05977 Transmembrane secretion effector BI313_05140 PF07969 Amidohydrolase family BI313_05150 PF00857 Isochorismatase family BI313_05160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_05160 PF07730 Histidine kinase BI313_05165 PF00072 Response regulator receiver domain BI313_05165 PF00196 Bacterial regulatory proteins, luxR family BI313_05180 PF02540 NAD synthase BI313_05180 PF00117 Glutamine amidotransferase class-I BI313_05180 PF00958 GMP synthase C terminal domain BI313_05185 PF00571 CBS domain BI313_05185 PF00478 IMP dehydrogenase / GMP reductase domain BI313_05190 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BI313_05190 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BI313_05205 PF00999 Sodium/hydrogen exchanger family BI313_05205 PF02254 TrkA-N domain BI313_05210 PF00483 Nucleotidyl transferase BI313_05215 PF02719 Polysaccharide biosynthesis protein BI313_05220 PF00953 Glycosyl transferase family 4 BI313_05225 PF18073 Rubredoxin metal binding domain BI313_05235 PF00216 Bacterial DNA-binding protein BI313_05240 PF00575 S1 RNA binding domain BI313_05245 PF02224 Cytidylate kinase BI313_05250 PF00444 Ribosomal protein L36 BI313_05260 PF04371 Porphyromonas-type peptidyl-arginine deiminase BI313_05265 PF00795 Carbon-nitrogen hydrolase BI313_05290 PF00528 Binding-protein-dependent transport system inner membrane component BI313_05295 PF00528 Binding-protein-dependent transport system inner membrane component BI313_05300 PF01547 Bacterial extracellular solute-binding protein BI313_05315 PF00356 Bacterial regulatory proteins, lacI family BI313_05325 PF03795 YCII-related domain BI313_05330 PF02616 Segregation and condensation protein ScpA BI313_05335 PF04079 Segregation and condensation complex subunit ScpB BI313_05340 PF01479 S4 domain BI313_05340 PF00849 RNA pseudouridylate synthase BI313_05355 PF00795 Carbon-nitrogen hydrolase BI313_05365 PF00155 Aminotransferase class I and II BI313_05370 PF00005 ABC transporter BI313_05375 PF03379 CcmB protein BI313_05380 PF01578 Cytochrome C assembly protein BI313_05390 PF03100 CcmE BI313_05395 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BI313_05395 PF01578 Cytochrome C assembly protein BI313_05400 PF08534 Redoxin BI313_05405 PF03918 Cytochrome C biogenesis protein BI313_05425 PF00561 alpha/beta hydrolase fold BI313_05435 PF00005 ABC transporter BI313_05435 PF00664 ABC transporter transmembrane region BI313_05440 PF00005 ABC transporter BI313_05440 PF00664 ABC transporter transmembrane region BI313_05445 PF01654 Cytochrome bd terminal oxidase subunit I BI313_05450 PF02322 Cytochrome bd terminal oxidase subunit II BI313_05470 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BI313_05470 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BI313_05475 PF00171 Aldehyde dehydrogenase family BI313_05480 PF00696 Amino acid kinase family BI313_05480 PF01472 PUA domain BI313_05495 PF00206 Lyase BI313_05500 PF01118 Semialdehyde dehydrogenase, NAD binding domain BI313_05510 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase BI313_05510 PF00696 Amino acid kinase family BI313_05515 PF07687 Peptidase dimerisation domain BI313_05515 PF01546 Peptidase family M20/M25/M40 BI313_05525 PF00764 Arginosuccinate synthase BI313_05535 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BI313_05535 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BI313_05545 PF09190 DALR domain BI313_05545 PF01406 tRNA synthetases class I (C) catalytic domain BI313_05550 PF02657 Fe-S metabolism associated domain BI313_05560 PF01258 Prokaryotic dksA/traR C4-type zinc finger BI313_05565 PF01809 Putative membrane protein insertion efficiency factor BI313_05570 PF01979 Amidohydrolase family BI313_05575 PF08460 Bacterial SH3 domain BI313_05575 PF01551 Peptidase family M23 BI313_05585 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BI313_05590 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BI313_05610 PF01095 Pectinesterase BI313_05615 PF00295 Glycosyl hydrolases family 28 BI313_05625 PF13419 Haloacid dehalogenase-like hydrolase BI313_05635 PF01979 Amidohydrolase family BI313_05645 PF09285 Elongation factor P, C-terminal BI313_05645 PF08207 Elongation factor P (EF-P) KOW-like domain BI313_05645 PF01132 Elongation factor P (EF-P) OB domain BI313_05650 PF04055 Radical SAM superfamily BI313_05655 PF00563 EAL domain BI313_05655 PF00990 Diguanylate cyclase, GGDEF domain BI313_05655 PF03707 Bacterial signalling protein N terminal repeat BI313_05655 PF13188 PAS domain BI313_05665 PF00588 SpoU rRNA Methylase family BI313_05670 PF00459 Inositol monophosphatase family BI313_05675 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BI313_05675 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BI313_05680 PF00545 ribonuclease BI313_05695 PF00271 Helicase conserved C-terminal domain BI313_05695 PF03880 DbpA RNA binding domain BI313_05695 PF00270 DEAD/DEAH box helicase BI313_05705 PF00156 Phosphoribosyl transferase domain BI313_05710 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BI313_05720 PF02798 Glutathione S-transferase, N-terminal domain BI313_05720 PF14497 Glutathione S-transferase, C-terminal domain BI313_05725 PF00313 'Cold-shock' DNA-binding domain BI313_05730 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BI313_05735 PF07152 YaeQ protein BI313_05745 PF00990 Diguanylate cyclase, GGDEF domain BI313_05745 PF00072 Response regulator receiver domain BI313_05745 PF00563 EAL domain BI313_05750 PF01435 Peptidase family M48 BI313_05755 PF00749 tRNA synthetases class I (E and Q), catalytic domain BI313_05760 PF00106 short chain dehydrogenase BI313_05765 PF07879 PHB/PHA accumulation regulator DNA-binding domain BI313_05765 PF05233 PHB accumulation regulatory domain BI313_05780 PF08676 MutL C terminal dimerisation domain BI313_05780 PF01119 DNA mismatch repair protein, C-terminal domain BI313_05785 PF11741 AMIN domain BI313_05785 PF01520 N-acetylmuramoyl-L-alanine amidase BI313_05795 PF01256 Carbohydrate kinase BI313_05795 PF03853 YjeF-related protein N-terminus BI313_05800 PF08331 Domain of unknown function (DUF1730) BI313_05805 PF02601 Exonuclease VII, large subunit BI313_05805 PF13742 OB-fold nucleic acid binding domain BI313_05815 PF03781 Sulfatase-modifying factor enzyme 1 BI313_05825 PF01612 3'-5' exonuclease BI313_05825 PF00570 HRDC domain BI313_05830 PF04679 ATP dependent DNA ligase C terminal region BI313_05830 PF01068 ATP dependent DNA ligase domain BI313_05830 PF13298 DNA polymerase Ligase (LigD) BI313_05850 PF00589 Phage integrase family BI313_05850 PF13356 Arm DNA-binding domain BI313_05870 PF13683 Integrase core domain BI313_05870 PF13276 HTH-like domain BI313_05875 PF01527 Transposase BI313_05900 PF01584 CheW-like domain BI313_05905 PF02203 Tar ligand binding domain homologue BI313_05905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_05905 PF00672 HAMP domain BI313_05910 PF02245 Methylpurine-DNA glycosylase (MPG) BI313_05915 PF00270 DEAD/DEAH box helicase BI313_05915 PF08494 DEAD/H associated BI313_05915 PF00271 Helicase conserved C-terminal domain BI313_05930 PF04386 Stringent starvation protein B BI313_05935 PF02798 Glutathione S-transferase, N-terminal domain BI313_05935 PF00043 Glutathione S-transferase, C-terminal domain BI313_05940 PF02167 Cytochrome C1 family BI313_05950 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BI313_05950 PF00355 Rieske [2Fe-2S] domain BI313_05955 PF01464 Transglycosylase SLT domain BI313_05970 PF00919 Uncharacterized protein family UPF0004 BI313_05970 PF01938 TRAM domain BI313_05970 PF04055 Radical SAM superfamily BI313_05975 PF02562 PhoH-like protein BI313_05985 PF02130 Uncharacterized protein family UPF0054 BI313_05995 PF03471 Transporter associated domain BI313_05995 PF00571 CBS domain BI313_06010 PF00171 Aldehyde dehydrogenase family BI313_06020 PF00528 Binding-protein-dependent transport system inner membrane component BI313_06025 PF00528 Binding-protein-dependent transport system inner membrane component BI313_06030 PF08402 TOBE domain BI313_06030 PF00005 ABC transporter BI313_06035 PF02321 Outer membrane efflux protein BI313_06040 PF07690 Major Facilitator Superfamily BI313_06045 PF13533 Biotin-lipoyl like BI313_06050 PF13416 Bacterial extracellular solute-binding protein BI313_06055 PF00202 Aminotransferase class-III BI313_06065 PF00120 Glutamine synthetase, catalytic domain BI313_06070 PF07722 Peptidase C26 BI313_06075 PF00120 Glutamine synthetase, catalytic domain BI313_06080 PF01266 FAD dependent oxidoreductase BI313_06085 PF00072 Response regulator receiver domain BI313_06085 PF00990 Diguanylate cyclase, GGDEF domain BI313_06095 PF01814 Hemerythrin HHE cation binding domain BI313_06100 PF07690 Major Facilitator Superfamily BI313_06100 PF00083 Sugar (and other) transporter BI313_06115 PF00384 Molybdopterin oxidoreductase BI313_06120 PF02634 FdhD/NarQ family BI313_06125 PF07690 Major Facilitator Superfamily BI313_06130 PF00202 Aminotransferase class-III BI313_06140 PF04286 Protein of unknown function (DUF445) BI313_06145 PF00512 His Kinase A (phospho-acceptor) domain BI313_06145 PF01627 Hpt domain BI313_06145 PF00672 HAMP domain BI313_06145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_06145 PF00072 Response regulator receiver domain BI313_06145 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BI313_06150 PF00072 Response regulator receiver domain BI313_06155 PF07690 Major Facilitator Superfamily BI313_06160 PF00440 Bacterial regulatory proteins, tetR family BI313_06165 PF00106 short chain dehydrogenase BI313_06170 PF05088 Bacterial NAD-glutamate dehydrogenase BI313_06180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI313_06180 PF00529 HlyD membrane-fusion protein of T1SS BI313_06185 PF00873 AcrB/AcrD/AcrF family BI313_06200 PF02896 PEP-utilising enzyme, TIM barrel domain BI313_06200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BI313_06200 PF00381 PTS HPr component phosphorylation site BI313_06200 PF00391 PEP-utilising enzyme, mobile domain BI313_06200 PF05524 PEP-utilising enzyme, N-terminal BI313_06205 PF00294 pfkB family carbohydrate kinase BI313_06210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BI313_06225 PF01527 Transposase BI313_06230 PF13683 Integrase core domain BI313_06230 PF13276 HTH-like domain BI313_06250 PF13495 Phage integrase, N-terminal SAM-like domain BI313_06250 PF00589 Phage integrase family BI313_06255 PF07549 SecD/SecF GG Motif BI313_06255 PF02355 Protein export membrane protein BI313_06260 PF02355 Protein export membrane protein BI313_06260 PF13721 SecD export protein N-terminal TM region BI313_06260 PF07549 SecD/SecF GG Motif BI313_06265 PF02699 Preprotein translocase subunit BI313_06270 PF01702 Queuine tRNA-ribosyltransferase BI313_06275 PF02547 Queuosine biosynthesis protein BI313_06315 PF00759 Glycosyl hydrolase family 9 BI313_06315 PF02927 Cellulase N-terminal ig-like domain BI313_06325 PF00037 4Fe-4S binding domain BI313_06340 PF01467 Cytidylyltransferase-like BI313_06350 PF00183 Hsp90 protein BI313_06350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_06370 PF07715 TonB-dependent Receptor Plug Domain BI313_06370 PF00593 TonB dependent receptor BI313_06380 PF00082 Subtilase family BI313_06380 PF09286 Pro-kumamolisin, activation domain BI313_06400 PF13520 Amino acid permease BI313_06420 PF01321 Creatinase/Prolidase N-terminal domain BI313_06420 PF00557 Metallopeptidase family M24 BI313_06425 PF00171 Aldehyde dehydrogenase family BI313_06430 PF00701 Dihydrodipicolinate synthetase family BI313_06435 PF04324 BFD-like [2Fe-2S] binding domain BI313_06435 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI313_06445 PF01266 FAD dependent oxidoreductase BI313_06450 PF05544 Proline racemase BI313_06460 PF02881 SRP54-type protein, helical bundle domain BI313_06460 PF00448 SRP54-type protein, GTPase domain BI313_06470 PF14815 NUDIX domain BI313_06470 PF00730 HhH-GPD superfamily base excision DNA repair protein BI313_06470 PF00633 Helix-hairpin-helix motif BI313_06475 PF04362 Bacterial Fe(2+) trafficking BI313_06480 PF00072 Response regulator receiver domain BI313_06480 PF13426 PAS domain BI313_06480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_06485 PF13649 Methyltransferase domain BI313_06525 PF02770 Acyl-CoA dehydrogenase, middle domain BI313_06525 PF12806 Acetyl-CoA dehydrogenase C-terminal like BI313_06525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI313_06525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI313_06535 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BI313_06535 PF02779 Transketolase, pyrimidine binding domain BI313_06535 PF02780 Transketolase, C-terminal domain BI313_06555 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BI313_06565 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BI313_06565 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BI313_06585 PF03808 Glycosyl transferase WecB/TagA/CpsF family BI313_06600 PF14667 Polysaccharide biosynthesis C-terminal domain BI313_06610 PF13439 Glycosyltransferase Family 4 BI313_06610 PF00534 Glycosyl transferases group 1 BI313_06630 PF02397 Bacterial sugar transferase BI313_06650 PF13411 MerR HTH family regulatory protein BI313_06655 PF00216 Bacterial DNA-binding protein BI313_06660 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BI313_06660 PF03147 Ferredoxin-fold anticodon binding domain BI313_06660 PF03484 tRNA synthetase B5 domain BI313_06660 PF03483 B3/4 domain BI313_06660 PF01588 Putative tRNA binding domain BI313_06665 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BI313_06665 PF01409 tRNA synthetases class II core domain (F) BI313_06670 PF00453 Ribosomal protein L20 BI313_06675 PF01632 Ribosomal protein L35 BI313_06680 PF00707 Translation initiation factor IF-3, C-terminal domain BI313_06680 PF05198 Translation initiation factor IF-3, N-terminal domain BI313_06685 PF03129 Anticodon binding domain BI313_06685 PF02824 TGS domain BI313_06685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BI313_06685 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BI313_06690 PF00356 Bacterial regulatory proteins, lacI family BI313_06695 PF00686 Starch binding domain BI313_06695 PF00128 Alpha amylase, catalytic domain BI313_06700 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BI313_06710 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation BI313_06710 PF10566 Glycoside hydrolase 97 BI313_06710 PF14508 Glycosyl-hydrolase 97 N-terminal BI313_06725 PF00128 Alpha amylase, catalytic domain BI313_06730 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BI313_06735 PF05101 Type IV secretory pathway, VirB3-like protein BI313_06745 PF01464 Transglycosylase SLT domain BI313_06750 PF00437 Type II/IV secretion system protein BI313_06755 PF03743 Bacterial conjugation TrbI-like protein BI313_06775 PF02534 Type IV secretory system Conjugative DNA transfer BI313_06790 PF12344 Ultra-violet resistance protein B BI313_06790 PF17757 UvrB interaction domain BI313_06790 PF02151 UvrB/uvrC motif BI313_06790 PF04851 Type III restriction enzyme, res subunit BI313_06790 PF00271 Helicase conserved C-terminal domain BI313_06805 PF07963 Prokaryotic N-terminal methylation motif BI313_06805 PF00114 Pilin (bacterial filament) BI313_06810 PF05567 Neisseria PilC beta-propeller domain BI313_06830 PF12019 Type II transport protein GspH BI313_06830 PF07963 Prokaryotic N-terminal methylation motif BI313_06835 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BI313_06835 PF11892 Domain of unknown function (DUF3412) BI313_06835 PF03641 Possible lysine decarboxylase BI313_06840 PF00593 TonB dependent receptor BI313_06845 PF01914 MarC family integral membrane protein BI313_06855 PF00462 Glutaredoxin BI313_06860 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BI313_06860 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BI313_06865 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BI313_06865 PF02222 ATP-grasp domain BI313_06870 PF00731 AIR carboxylase BI313_06880 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BI313_06880 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BI313_06890 PF00575 S1 RNA binding domain BI313_06890 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BI313_06890 PF00013 KH domain BI313_06890 PF03725 3' exoribonuclease family, domain 2 BI313_06890 PF01138 3' exoribonuclease family, domain 1 BI313_06895 PF00312 Ribosomal protein S15 BI313_06900 PF09157 Pseudouridine synthase II TruB, C-terminal BI313_06900 PF16198 tRNA pseudouridylate synthase B C-terminal domain BI313_06900 PF01509 TruB family pseudouridylate synthase (N terminal domain) BI313_06905 PF02033 Ribosome-binding factor A BI313_06910 PF08364 Bacterial translation initiation factor IF-2 associated region BI313_06910 PF11987 Translation-initiation factor 2 BI313_06910 PF00009 Elongation factor Tu GTP binding domain BI313_06910 PF04760 Translation initiation factor IF-2, N-terminal region BI313_06915 PF13184 NusA-like KH domain BI313_06915 PF08529 NusA N-terminal domain BI313_06915 PF00575 S1 RNA binding domain BI313_06920 PF17384 RimP C-terminal SH3 domain BI313_06920 PF02576 RimP N-terminal domain BI313_06930 PF00361 Proton-conducting membrane transporter BI313_06935 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus BI313_06935 PF00361 Proton-conducting membrane transporter BI313_06940 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BI313_06940 PF00361 Proton-conducting membrane transporter BI313_06945 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BI313_06950 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BI313_06955 PF12838 4Fe-4S dicluster domain BI313_06960 PF00146 NADH dehydrogenase BI313_06965 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal BI313_06965 PF00384 Molybdopterin oxidoreductase BI313_06965 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BI313_06970 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BI313_06970 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BI313_06970 PF10531 SLBB domain BI313_06980 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BI313_06985 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BI313_06990 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BI313_06995 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BI313_07010 PF00121 Triosephosphate isomerase BI313_07030 PF00563 EAL domain BI313_07030 PF03707 Bacterial signalling protein N terminal repeat BI313_07030 PF00990 Diguanylate cyclase, GGDEF domain BI313_07050 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BI313_07050 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BI313_07050 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BI313_07050 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BI313_07055 PF01039 Carboxyl transferase domain BI313_07055 PF17848 Acetyl-coA carboxylase zinc finger domain BI313_07060 PF00290 Tryptophan synthase alpha chain BI313_07070 PF00291 Pyridoxal-phosphate dependent enzyme BI313_07075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_07075 PF03466 LysR substrate binding domain BI313_07080 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BI313_07085 PF01416 tRNA pseudouridine synthase BI313_07100 PF01118 Semialdehyde dehydrogenase, NAD binding domain BI313_07100 PF02774 Semialdehyde dehydrogenase, dimerisation domain BI313_07105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BI313_07105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BI313_07110 PF01264 Chorismate synthase BI313_07120 PF05175 Methyltransferase small domain BI313_07125 PF02630 SCO1/SenC BI313_07130 PF02666 Phosphatidylserine decarboxylase BI313_07140 PF06737 Transglycosylase-like domain BI313_07145 PF05872 Bacterial protein of unknown function (DUF853) BI313_07155 PF00293 NUDIX domain BI313_07170 PF03449 Transcription elongation factor, N-terminal BI313_07170 PF01272 Transcription elongation factor, GreA/GreB, C-term BI313_07175 PF04055 Radical SAM superfamily BI313_07175 PF18693 TRAM domain BI313_07175 PF00919 Uncharacterized protein family UPF0004 BI313_07180 PF01738 Dienelactone hydrolase family BI313_07200 PF00692 dUTPase BI313_07210 PF10609 NUBPL iron-transfer P-loop NTPase BI313_07215 PF00593 TonB dependent receptor BI313_07215 PF07715 TonB-dependent Receptor Plug Domain BI313_07225 PF05649 Peptidase family M13 BI313_07225 PF01431 Peptidase family M13 BI313_07230 PF01431 Peptidase family M13 BI313_07230 PF05649 Peptidase family M13 BI313_07250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BI313_07250 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI313_07255 PF01266 FAD dependent oxidoreductase BI313_07260 PF04235 Protein of unknown function (DUF418) BI313_07265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BI313_07270 PF00877 NlpC/P60 family BI313_07275 PF00877 NlpC/P60 family BI313_07300 PF00158 Sigma-54 interaction domain BI313_07300 PF00072 Response regulator receiver domain BI313_07300 PF02954 Bacterial regulatory protein, Fis family BI313_07305 PF00512 His Kinase A (phospho-acceptor) domain BI313_07305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_07320 PF08241 Methyltransferase domain BI313_07325 PF00375 Sodium:dicarboxylate symporter family BI313_07330 PF00245 Alkaline phosphatase BI313_07335 PF11734 TilS substrate C-terminal domain BI313_07335 PF09179 TilS substrate binding domain BI313_07335 PF01171 PP-loop family BI313_07340 PF02609 Exonuclease VII small subunit BI313_07345 PF00348 Polyprenyl synthetase BI313_07355 PF14521 Lysine-specific metallo-endopeptidase BI313_07365 PF01523 Putative modulator of DNA gyrase BI313_07370 PF04751 Protein of unknown function (DUF615) BI313_07375 PF01523 Putative modulator of DNA gyrase BI313_07390 PF10150 Ribonuclease E/G family BI313_07390 PF00575 S1 RNA binding domain BI313_07395 PF02545 Maf-like protein BI313_07400 PF04402 Protein of unknown function (DUF541) BI313_07415 PF02590 Predicted SPOUT methyltransferase BI313_07430 PF01467 Cytidylyltransferase-like BI313_07445 PF13603 Leucyl-tRNA synthetase, Domain 2 BI313_07445 PF00133 tRNA synthetases class I (I, L, M and V) BI313_07445 PF08264 Anticodon-binding domain of tRNA BI313_07455 PF00085 Thioredoxin BI313_07465 PF04070 Domain of unknown function (DUF378) BI313_07480 PF03466 LysR substrate binding domain BI313_07480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_07485 PF01022 Bacterial regulatory protein, arsR family BI313_07520 PF00005 ABC transporter BI313_07520 PF00664 ABC transporter transmembrane region BI313_07530 PF00999 Sodium/hydrogen exchanger family BI313_07535 PF00144 Beta-lactamase BI313_07535 PF07930 D-aminopeptidase, domain B BI313_07540 PF03737 Aldolase/RraA BI313_07570 PF08448 PAS fold BI313_07570 PF00990 Diguanylate cyclase, GGDEF domain BI313_07575 PF00849 RNA pseudouridylate synthase BI313_07575 PF01479 S4 domain BI313_07580 PF00563 EAL domain BI313_07580 PF08448 PAS fold BI313_07580 PF00990 Diguanylate cyclase, GGDEF domain BI313_07585 PF00270 DEAD/DEAH box helicase BI313_07585 PF03880 DbpA RNA binding domain BI313_07585 PF00271 Helicase conserved C-terminal domain BI313_07600 PF01494 FAD binding domain BI313_07635 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BI313_07635 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BI313_07645 PF00654 Voltage gated chloride channel BI313_07660 PF07715 TonB-dependent Receptor Plug Domain BI313_07660 PF00593 TonB dependent receptor BI313_07670 PF01483 Proprotein convertase P-domain BI313_07670 PF00082 Subtilase family BI313_07685 PF01483 Proprotein convertase P-domain BI313_07685 PF00082 Subtilase family BI313_07695 PF00248 Aldo/keto reductase family BI313_07700 PF07690 Major Facilitator Superfamily BI313_07705 PF03466 LysR substrate binding domain BI313_07705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_07715 PF06719 AraC-type transcriptional regulator N-terminus BI313_07715 PF12833 Helix-turn-helix domain BI313_07725 PF03466 LysR substrate binding domain BI313_07725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_07730 PF00248 Aldo/keto reductase family BI313_07735 PF00440 Bacterial regulatory proteins, tetR family BI313_07735 PF16859 Tetracyclin repressor-like, C-terminal domain BI313_07740 PF02321 Outer membrane efflux protein BI313_07745 PF00873 AcrB/AcrD/AcrF family BI313_07750 PF00529 HlyD membrane-fusion protein of T1SS BI313_07750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI313_07760 PF01475 Ferric uptake regulator family BI313_07765 PF00749 tRNA synthetases class I (E and Q), catalytic domain BI313_07790 PF06123 Inner membrane protein CreD BI313_07795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_07795 PF00512 His Kinase A (phospho-acceptor) domain BI313_07795 PF00672 HAMP domain BI313_07800 PF00072 Response regulator receiver domain BI313_07800 PF00486 Transcriptional regulatory protein, C terminal BI313_07805 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BI313_07825 PF02559 CarD-like/TRCF domain BI313_07825 PF17757 UvrB interaction domain BI313_07825 PF00270 DEAD/DEAH box helicase BI313_07825 PF00271 Helicase conserved C-terminal domain BI313_07825 PF03461 TRCF domain BI313_07835 PF02895 Signal transducing histidine kinase, homodimeric domain BI313_07835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_07835 PF01627 Hpt domain BI313_07835 PF09078 CheY binding BI313_07835 PF01584 CheW-like domain BI313_07840 PF00672 HAMP domain BI313_07840 PF02203 Tar ligand binding domain homologue BI313_07840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_07845 PF01584 CheW-like domain BI313_07850 PF00563 EAL domain BI313_07850 PF00990 Diguanylate cyclase, GGDEF domain BI313_07850 PF03707 Bacterial signalling protein N terminal repeat BI313_07855 PF03705 CheR methyltransferase, all-alpha domain BI313_07855 PF01739 CheR methyltransferase, SAM binding domain BI313_07860 PF00072 Response regulator receiver domain BI313_07860 PF01339 CheB methylesterase BI313_07870 PF13091 PLD-like domain BI313_07875 PF05649 Peptidase family M13 BI313_07875 PF01431 Peptidase family M13 BI313_07885 PF00300 Histidine phosphatase superfamily (branch 1) BI313_07890 PF04493 Endonuclease V BI313_07905 PF02678 Pirin BI313_07905 PF05726 Pirin C-terminal cupin domain BI313_07920 PF05726 Pirin C-terminal cupin domain BI313_07920 PF02678 Pirin BI313_07925 PF13722 5TM C-terminal transporter carbon starvation CstA BI313_07925 PF02554 Carbon starvation protein CstA BI313_07930 PF04328 Selenoprotein, putative BI313_07970 PF12804 MobA-like NTP transferase domain BI313_07975 PF02625 XdhC and CoxI family BI313_07975 PF13478 XdhC Rossmann domain BI313_07980 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BI313_07980 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BI313_07990 PF10518 TAT (twin-arginine translocation) pathway signal sequence BI313_07990 PF00111 2Fe-2S iron-sulfur cluster binding domain BI313_07990 PF01799 [2Fe-2S] binding domain BI313_07995 PF08659 KR domain BI313_07995 PF00107 Zinc-binding dehydrogenase BI313_07995 PF00109 Beta-ketoacyl synthase, N-terminal domain BI313_07995 PF02801 Beta-ketoacyl synthase, C-terminal domain BI313_07995 PF08240 Alcohol dehydrogenase GroES-like domain BI313_07995 PF14765 Polyketide synthase dehydratase BI313_07995 PF00550 Phosphopantetheine attachment site BI313_07995 PF16197 Ketoacyl-synthetase C-terminal extension BI313_07995 PF00698 Acyl transferase domain BI313_08005 PF00436 Single-strand binding protein family BI313_08010 PF00348 Polyprenyl synthetase BI313_08020 PF02875 Mur ligase family, glutamate ligase domain BI313_08020 PF08245 Mur ligase middle domain BI313_08035 PF01842 ACT domain BI313_08035 PF00696 Amino acid kinase family BI313_08040 PF02567 Phenazine biosynthesis-like protein BI313_08045 PF02567 Phenazine biosynthesis-like protein BI313_08055 PF02566 OsmC-like protein BI313_08060 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BI313_08060 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BI313_08065 PF03652 Holliday junction resolvase BI313_08070 PF02622 Uncharacterized ACR, COG1678 BI313_08075 PF13687 Domain of unknown function (DUF4153) BI313_08080 PF00958 GMP synthase C terminal domain BI313_08080 PF13302 Acetyltransferase (GNAT) domain BI313_08080 PF00117 Glutamine amidotransferase class-I BI313_08080 PF13673 Acetyltransferase (GNAT) domain BI313_08080 PF03352 Methyladenine glycosylase BI313_08100 PF00437 Type II/IV secretion system protein BI313_08110 PF01168 Alanine racemase, N-terminal domain BI313_08115 PF03807 NADP oxidoreductase coenzyme F420-dependent BI313_08115 PF14748 Pyrroline-5-carboxylate reductase dimerisation BI313_08150 PF01965 DJ-1/PfpI family BI313_08160 PF02082 Transcriptional regulator BI313_08165 PF01458 Uncharacterized protein family (UPF0051) BI313_08170 PF00005 ABC transporter BI313_08175 PF01458 Uncharacterized protein family (UPF0051) BI313_08180 PF00266 Aminotransferase class-V BI313_08190 PF00583 Acetyltransferase (GNAT) family BI313_08195 PF00355 Rieske [2Fe-2S] domain BI313_08200 PF07715 TonB-dependent Receptor Plug Domain BI313_08200 PF00593 TonB dependent receptor BI313_08205 PF13640 2OG-Fe(II) oxygenase superfamily BI313_08205 PF18331 PKHD-type hydroxylase C-terminal domain BI313_08235 PF02424 ApbE family BI313_08240 PF00667 FAD binding domain BI313_08240 PF00258 Flavodoxin BI313_08240 PF00175 Oxidoreductase NAD-binding domain BI313_08255 PF07687 Peptidase dimerisation domain BI313_08255 PF01546 Peptidase family M20/M25/M40 BI313_08265 PF01636 Phosphotransferase enzyme family BI313_08270 PF00483 Nucleotidyl transferase BI313_08275 PF00308 Bacterial dnaA protein BI313_08280 PF01594 AI-2E family transporter BI313_08290 PF00586 AIR synthase related protein, N-terminal domain BI313_08290 PF02769 AIR synthase related protein, C-terminal domain BI313_08305 PF00551 Formyl transferase BI313_08340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BI313_08345 PF01722 BolA-like protein BI313_08350 PF01380 SIS domain BI313_08350 PF00571 CBS domain BI313_08365 PF03968 OstA-like protein BI313_08370 PF00005 ABC transporter BI313_08375 PF00309 Sigma-54 factor, Activator interacting domain (AID) BI313_08375 PF04552 Sigma-54, DNA binding domain BI313_08375 PF04963 Sigma-54 factor, core binding domain BI313_08380 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BI313_08385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BI313_08390 PF07475 HPr Serine kinase C-terminal domain BI313_08390 PF02603 HPr Serine kinase N terminus BI313_08395 PF03668 P-loop ATPase protein family BI313_08405 PF00381 PTS HPr component phosphorylation site BI313_08410 PF02896 PEP-utilising enzyme, TIM barrel domain BI313_08410 PF00391 PEP-utilising enzyme, mobile domain BI313_08410 PF05524 PEP-utilising enzyme, N-terminal BI313_08415 PF01769 Divalent cation transporter BI313_08415 PF00571 CBS domain BI313_08415 PF03448 MgtE intracellular N domain BI313_08420 PF00756 Putative esterase BI313_08425 PF02322 Cytochrome bd terminal oxidase subunit II BI313_08430 PF01654 Cytochrome bd terminal oxidase subunit I BI313_08435 PF00324 Amino acid permease BI313_08440 PF00544 Pectate lyase BI313_08445 PF00561 alpha/beta hydrolase fold BI313_08450 PF00196 Bacterial regulatory proteins, luxR family BI313_08455 PF00324 Amino acid permease BI313_08500 PF00376 MerR family regulatory protein BI313_08500 PF09278 MerR, DNA binding BI313_08505 PF07690 Major Facilitator Superfamily BI313_08510 PF03738 Glutathionylspermidine synthase preATP-grasp BI313_08535 PF04012 PspA/IM30 family BI313_08550 PF01243 Pyridoxamine 5'-phosphate oxidase BI313_08550 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BI313_08555 PF01202 Shikimate kinase BI313_08560 PF01761 3-dehydroquinate synthase BI313_08570 PF01208 Uroporphyrinogen decarboxylase (URO-D) BI313_08575 PF07690 Major Facilitator Superfamily BI313_08580 PF00672 HAMP domain BI313_08580 PF17149 Periplasmic sensor domain found in signal transduction proteins BI313_08580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_08580 PF00512 His Kinase A (phospho-acceptor) domain BI313_08580 PF01627 Hpt domain BI313_08580 PF00072 Response regulator receiver domain BI313_08585 PF17149 Periplasmic sensor domain found in signal transduction proteins BI313_08585 PF00672 HAMP domain BI313_08585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_08585 PF01627 Hpt domain BI313_08585 PF00072 Response regulator receiver domain BI313_08585 PF00512 His Kinase A (phospho-acceptor) domain BI313_08590 PF00512 His Kinase A (phospho-acceptor) domain BI313_08590 PF17149 Periplasmic sensor domain found in signal transduction proteins BI313_08590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_08590 PF00672 HAMP domain BI313_08590 PF01627 Hpt domain BI313_08590 PF00072 Response regulator receiver domain BI313_08595 PF04264 YceI-like domain BI313_08610 PF00313 'Cold-shock' DNA-binding domain BI313_08625 PF03313 Serine dehydratase alpha chain BI313_08625 PF03315 Serine dehydratase beta chain BI313_08630 PF12697 Alpha/beta hydrolase family BI313_08635 PF03447 Homoserine dehydrogenase, NAD binding domain BI313_08635 PF00696 Amino acid kinase family BI313_08635 PF00742 Homoserine dehydrogenase BI313_08640 PF01053 Cys/Met metabolism PLP-dependent enzyme BI313_08645 PF00561 alpha/beta hydrolase fold BI313_08650 PF01551 Peptidase family M23 BI313_08650 PF01476 LysM domain BI313_08650 PF08525 Opacity-associated protein A N-terminal motif BI313_08655 PF00009 Elongation factor Tu GTP binding domain BI313_08655 PF16658 Class II release factor RF3, C-terminal domain BI313_08660 PF03006 Haemolysin-III related BI313_08665 PF05170 AsmA family BI313_08670 PF00571 CBS domain BI313_08670 PF00478 IMP dehydrogenase / GMP reductase domain BI313_08680 PF00912 Transglycosylase BI313_08685 PF01430 Hsp33 protein BI313_08695 PF07715 TonB-dependent Receptor Plug Domain BI313_08695 PF00593 TonB dependent receptor BI313_08700 PF00440 Bacterial regulatory proteins, tetR family BI313_08705 PF00561 alpha/beta hydrolase fold BI313_08710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI313_08710 PF09317 Domain of unknown function (DUF1974) BI313_08710 PF02770 Acyl-CoA dehydrogenase, middle domain BI313_08710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI313_08740 PF01597 Glycine cleavage H-protein BI313_08745 PF08669 Glycine cleavage T-protein C-terminal barrel domain BI313_08745 PF01571 Aminomethyltransferase folate-binding domain BI313_08755 PF01145 SPFH domain / Band 7 family BI313_08755 PF16200 C-terminal region of band_7 BI313_08760 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BI313_08765 PF03819 MazG nucleotide pyrophosphohydrolase domain BI313_08770 PF00459 Inositol monophosphatase family BI313_08775 PF00293 NUDIX domain BI313_08780 PF00202 Aminotransferase class-III BI313_08785 PF04452 RNA methyltransferase BI313_08805 PF01476 LysM domain BI313_08805 PF00704 Glycosyl hydrolases family 18 BI313_08810 PF00728 Glycosyl hydrolase family 20, catalytic domain BI313_08810 PF02838 Glycosyl hydrolase family 20, domain 2 BI313_08810 PF07691 PA14 domain BI313_08820 PF07691 PA14 domain BI313_08820 PF14310 Fibronectin type III-like domain BI313_08820 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI313_08820 PF00933 Glycosyl hydrolase family 3 N terminal domain BI313_08830 PF17678 Glycosyl hydrolase family 92 N-terminal domain BI313_08830 PF07971 Glycosyl hydrolase family 92 BI313_08835 PF01301 Glycosyl hydrolases family 35 BI313_08870 PF03932 CutC family BI313_08875 PF01112 Asparaginase BI313_08880 PF12034 Domain of unknown function (DUF3520) BI313_08880 PF00092 von Willebrand factor type A domain BI313_08880 PF12450 von Willebrand factor BI313_08895 PF13302 Acetyltransferase (GNAT) domain BI313_08910 PF00072 Response regulator receiver domain BI313_08910 PF01584 CheW-like domain BI313_08910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_08910 PF01627 Hpt domain BI313_08915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_08915 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BI313_08920 PF01584 CheW-like domain BI313_08925 PF00072 Response regulator receiver domain BI313_08930 PF00072 Response regulator receiver domain BI313_08935 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BI313_08935 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BI313_08945 PF03747 ADP-ribosylglycohydrolase BI313_08950 PF00814 Glycoprotease family BI313_08955 PF13307 Helicase C-terminal domain BI313_08955 PF04851 Type III restriction enzyme, res subunit BI313_08965 PF14814 Bifunctional transglycosylase second domain BI313_08965 PF00905 Penicillin binding protein transpeptidase domain BI313_08965 PF00912 Transglycosylase BI313_08970 PF00535 Glycosyl transferase family 2 BI313_08980 PF13291 ACT domain BI313_08980 PF04607 Region found in RelA / SpoT proteins BI313_08980 PF02824 TGS domain BI313_08985 PF08042 PqqA family BI313_08990 PF12706 Beta-lactamase superfamily domain BI313_08995 PF03070 TENA/THI-4/PQQC family BI313_09000 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BI313_09005 PF04055 Radical SAM superfamily BI313_09005 PF13186 Iron-sulfur cluster-binding domain BI313_09020 PF02685 Glucokinase BI313_09030 PF11898 Domain of unknown function (DUF3418) BI313_09030 PF04408 Helicase associated domain (HA2) BI313_09030 PF00270 DEAD/DEAH box helicase BI313_09030 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BI313_09030 PF00271 Helicase conserved C-terminal domain BI313_09035 PF00210 Ferritin-like domain BI313_09040 PF16124 RecQ zinc-binding BI313_09040 PF00570 HRDC domain BI313_09040 PF00270 DEAD/DEAH box helicase BI313_09040 PF00271 Helicase conserved C-terminal domain BI313_09040 PF09382 RQC domain BI313_09060 PF01479 S4 domain BI313_09060 PF00849 RNA pseudouridylate synthase BI313_09070 PF02203 Tar ligand binding domain homologue BI313_09070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_09070 PF00672 HAMP domain BI313_09080 PF13426 PAS domain BI313_09080 PF08447 PAS fold BI313_09080 PF07536 HWE histidine kinase BI313_09095 PF06508 Queuosine biosynthesis protein QueC BI313_09100 PF04055 Radical SAM superfamily BI313_09110 PF00691 OmpA family BI313_09115 PF07676 WD40-like Beta Propeller Repeat BI313_09115 PF04052 TolB amino-terminal domain BI313_09125 PF02472 Biopolymer transport protein ExbD/TolR BI313_09130 PF01618 MotA/TolQ/ExbB proton channel family BI313_09135 PF03061 Thioesterase superfamily BI313_09140 PF05491 RuvB C-terminal winged helix domain BI313_09140 PF05496 Holliday junction DNA helicase RuvB P-loop domain BI313_09140 PF17864 RuvB AAA lid domain BI313_09150 PF02705 K+ potassium transporter BI313_09155 PF07499 RuvA, C-terminal domain BI313_09155 PF01330 RuvA N terminal domain BI313_09160 PF02075 Crossover junction endodeoxyribonuclease RuvC BI313_09165 PF01709 Transcriptional regulator BI313_09180 PF00152 tRNA synthetases class II (D, K and N) BI313_09180 PF01336 OB-fold nucleic acid binding domain BI313_09180 PF02938 GAD domain BI313_09200 PF07690 Major Facilitator Superfamily BI313_09215 PF00753 Metallo-beta-lactamase superfamily BI313_09225 PF01925 Sulfite exporter TauE/SafE BI313_09240 PF05506 Domain of unknown function (DUF756) BI313_09240 PF04185 Phosphoesterase family BI313_09250 PF13472 GDSL-like Lipase/Acylhydrolase family BI313_09250 PF07859 alpha/beta hydrolase fold BI313_09260 PF03466 LysR substrate binding domain BI313_09260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_09265 PF13406 Transglycosylase SLT domain BI313_09275 PF00005 ABC transporter BI313_09275 PF12848 ABC transporter BI313_09280 PF07715 TonB-dependent Receptor Plug Domain BI313_09280 PF00593 TonB dependent receptor BI313_09290 PF07715 TonB-dependent Receptor Plug Domain BI313_09290 PF00593 TonB dependent receptor BI313_09295 PF00593 TonB dependent receptor BI313_09295 PF07715 TonB-dependent Receptor Plug Domain BI313_09300 PF00067 Cytochrome P450 BI313_09310 PF00999 Sodium/hydrogen exchanger family BI313_09310 PF02254 TrkA-N domain BI313_09315 PF03328 HpcH/HpaI aldolase/citrate lyase family BI313_09320 PF00593 TonB dependent receptor BI313_09320 PF07660 Secretin and TonB N terminus short domain BI313_09320 PF07715 TonB-dependent Receptor Plug Domain BI313_09330 PF04183 IucA / IucC family BI313_09330 PF06276 Ferric iron reductase FhuF-like transporter BI313_09335 PF07690 Major Facilitator Superfamily BI313_09340 PF06276 Ferric iron reductase FhuF-like transporter BI313_09340 PF04183 IucA / IucC family BI313_09345 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BI313_09345 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BI313_09355 PF02654 Cobalamin-5-phosphate synthase BI313_09360 PF00300 Histidine phosphatase superfamily (branch 1) BI313_09365 PF02277 Phosphoribosyltransferase BI313_09370 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BI313_09375 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BI313_09375 PF07685 CobB/CobQ-like glutamine amidotransferase domain BI313_09380 PF00155 Aminotransferase class I and II BI313_09385 PF17113 Regulatory signalling modulator protein AmpE BI313_09385 PF03186 CobD/Cbib protein BI313_09390 PF12557 Cob(I)alamin adenosyltransferase N terminal BI313_09390 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BI313_09405 PF07715 TonB-dependent Receptor Plug Domain BI313_09405 PF00593 TonB dependent receptor BI313_09410 PF01053 Cys/Met metabolism PLP-dependent enzyme BI313_09415 PF17871 AAA lid domain BI313_09415 PF07724 AAA domain (Cdc48 subfamily) BI313_09415 PF10431 C-terminal, D2-small domain, of ClpB protein BI313_09415 PF02861 Clp amino terminal domain, pathogenicity island component BI313_09415 PF00004 ATPase family associated with various cellular activities (AAA) BI313_09420 PF01541 GIY-YIG catalytic domain BI313_09455 PF00593 TonB dependent receptor BI313_09455 PF07715 TonB-dependent Receptor Plug Domain BI313_09460 PF02358 Trehalose-phosphatase BI313_09465 PF00723 Glycosyl hydrolases family 15 BI313_09470 PF00982 Glycosyltransferase family 20 BI313_09475 PF01011 PQQ enzyme repeat BI313_09480 PF02203 Tar ligand binding domain homologue BI313_09480 PF00672 HAMP domain BI313_09480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_09485 PF04134 Protein of unknown function, DUF393 BI313_09500 PF00849 RNA pseudouridylate synthase BI313_09505 PF13525 Outer membrane lipoprotein BI313_09515 PF00795 Carbon-nitrogen hydrolase BI313_09515 PF02540 NAD synthase BI313_09525 PF02629 CoA binding domain BI313_09525 PF00549 CoA-ligase BI313_09530 PF08442 ATP-grasp domain BI313_09530 PF00549 CoA-ligase BI313_09535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_09535 PF00512 His Kinase A (phospho-acceptor) domain BI313_09540 PF00072 Response regulator receiver domain BI313_09540 PF02954 Bacterial regulatory protein, Fis family BI313_09540 PF00158 Sigma-54 interaction domain BI313_09545 PF00437 Type II/IV secretion system protein BI313_09545 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BI313_09565 PF00893 Small Multidrug Resistance protein BI313_09580 PF00482 Type II secretion system (T2SS), protein F BI313_09585 PF06750 Bacterial Peptidase A24 N-terminal domain BI313_09585 PF01478 Type IV leader peptidase family BI313_09590 PF01121 Dephospho-CoA kinase BI313_09595 PF11808 Phosphate regulon sensor protein PhoR BI313_09595 PF00989 PAS fold BI313_09595 PF00512 His Kinase A (phospho-acceptor) domain BI313_09595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_09600 PF00072 Response regulator receiver domain BI313_09600 PF00486 Transcriptional regulatory protein, C terminal BI313_09610 PF18030 RimK PreATP-grasp domain BI313_09610 PF08443 RimK-like ATP-grasp domain BI313_09615 PF00128 Alpha amylase, catalytic domain BI313_09615 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI313_09645 PF00580 UvrD/REP helicase N-terminal domain BI313_09645 PF12705 PD-(D/E)XK nuclease superfamily BI313_09645 PF13361 UvrD-like helicase C-terminal domain BI313_09675 PF02534 Type IV secretory system Conjugative DNA transfer BI313_09735 PF03793 PASTA domain BI313_09735 PF00069 Protein kinase domain BI313_09740 PF00069 Protein kinase domain BI313_09740 PF03793 PASTA domain BI313_09765 PF00664 ABC transporter transmembrane region BI313_09765 PF03412 Peptidase C39 family BI313_09765 PF00005 ABC transporter BI313_09865 PF04002 RadC-like JAB domain BI313_09930 PF00657 GDSL-like Lipase/Acylhydrolase BI313_09930 PF03797 Autotransporter beta-domain BI313_09940 PF05690 Thiazole biosynthesis protein ThiG BI313_09945 PF02390 Putative methyltransferase BI313_09950 PF02080 TrkA-C domain BI313_09950 PF03600 Citrate transporter BI313_09965 PF01557 Fumarylacetoacetate (FAA) hydrolase family BI313_09970 PF01741 Large-conductance mechanosensitive channel, MscL BI313_09980 PF00356 Bacterial regulatory proteins, lacI family BI313_09995 PF00553 Cellulose binding domain BI313_09995 PF00041 Fibronectin type III domain BI313_09995 PF01341 Glycosyl hydrolases family 6 BI313_10005 PF00703 Glycosyl hydrolases family 2 BI313_10005 PF02837 Glycosyl hydrolases family 2, sugar binding domain BI313_10005 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain BI313_10010 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation BI313_10010 PF10566 Glycoside hydrolase 97 BI313_10010 PF14508 Glycosyl-hydrolase 97 N-terminal BI313_10015 PF00135 Carboxylesterase family BI313_10020 PF08032 RNA 2'-O ribose methyltransferase substrate binding BI313_10020 PF00588 SpoU rRNA Methylase family BI313_10025 PF01235 Sodium:alanine symporter family BI313_10035 PF11838 ERAP1-like C-terminal domain BI313_10035 PF01433 Peptidase family M1 domain BI313_10040 PF00873 AcrB/AcrD/AcrF family BI313_10045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI313_10045 PF00529 HlyD membrane-fusion protein of T1SS BI313_10050 PF00009 Elongation factor Tu GTP binding domain BI313_10055 PF01507 Phosphoadenosine phosphosulfate reductase family BI313_10060 PF00258 Flavodoxin BI313_10060 PF00175 Oxidoreductase NAD-binding domain BI313_10060 PF00667 FAD binding domain BI313_10065 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BI313_10065 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BI313_10070 PF01507 Phosphoadenosine phosphosulfate reductase family BI313_10090 PF00072 Response regulator receiver domain BI313_10090 PF01627 Hpt domain BI313_10090 PF00512 His Kinase A (phospho-acceptor) domain BI313_10090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_10090 PF00672 HAMP domain BI313_10100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_10100 PF03466 LysR substrate binding domain BI313_10105 PF10414 Sirohaem synthase dimerisation region BI313_10105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BI313_10105 PF14824 Sirohaem biosynthesis protein central BI313_10110 PF00291 Pyridoxal-phosphate dependent enzyme BI313_10120 PF01661 Macro domain BI313_10125 PF00274 Fructose-bisphosphate aldolase class-I BI313_10135 PF00224 Pyruvate kinase, barrel domain BI313_10135 PF02887 Pyruvate kinase, alpha/beta domain BI313_10145 PF00162 Phosphoglycerate kinase BI313_10165 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BI313_10165 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BI313_10185 PF03922 OmpW family BI313_10195 PF00753 Metallo-beta-lactamase superfamily BI313_10195 PF04273 Putative phosphatase (DUF442) BI313_10205 PF00528 Binding-protein-dependent transport system inner membrane component BI313_10210 PF03459 TOBE domain BI313_10210 PF00005 ABC transporter BI313_10225 PF03965 Penicillinase repressor BI313_10245 PF01476 LysM domain BI313_10245 PF03734 L,D-transpeptidase catalytic domain BI313_10250 PF04225 Opacity-associated protein A LysM-like domain BI313_10250 PF01551 Peptidase family M23 BI313_10265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_10265 PF03466 LysR substrate binding domain BI313_10270 PF07715 TonB-dependent Receptor Plug Domain BI313_10270 PF00593 TonB dependent receptor BI313_10275 PF00456 Transketolase, thiamine diphosphate binding domain BI313_10275 PF02780 Transketolase, C-terminal domain BI313_10275 PF02779 Transketolase, pyrimidine binding domain BI313_10280 PF00375 Sodium:dicarboxylate symporter family BI313_10290 PF07584 Aerotolerance regulator N-terminal BI313_10290 PF00092 von Willebrand factor type A domain BI313_10310 PF17863 AAA lid domain BI313_10310 PF07726 ATPase family associated with various cellular activities (AAA) BI313_10315 PF00263 Bacterial type II and III secretion system protein BI313_10315 PF07660 Secretin and TonB N terminus short domain BI313_10315 PF11741 AMIN domain BI313_10315 PF03958 Bacterial type II/III secretion system short domain BI313_10340 PF17092 Penicillin-binding protein OB-like domain BI313_10340 PF00912 Transglycosylase BI313_10340 PF00905 Penicillin binding protein transpeptidase domain BI313_10350 PF00285 Citrate synthase, C-terminal domain BI313_10355 PF01197 Ribosomal protein L31 BI313_10360 PF01156 Inosine-uridine preferring nucleoside hydrolase BI313_10365 PF00270 DEAD/DEAH box helicase BI313_10365 PF17191 RecG wedge domain BI313_10365 PF00271 Helicase conserved C-terminal domain BI313_10370 PF01042 Endoribonuclease L-PSP BI313_10375 PF08666 SAF domain BI313_10375 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BI313_10385 PF13378 Enolase C-terminal domain-like BI313_10385 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BI313_10390 PF07690 Major Facilitator Superfamily BI313_10395 PF00171 Aldehyde dehydrogenase family BI313_10400 PF00701 Dihydrodipicolinate synthetase family BI313_10405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_10405 PF03466 LysR substrate binding domain BI313_10415 PF02824 TGS domain BI313_10415 PF04607 Region found in RelA / SpoT proteins BI313_10415 PF13291 ACT domain BI313_10420 PF13419 Haloacid dehalogenase-like hydrolase BI313_10425 PF04198 Putative sugar-binding domain BI313_10435 PF04966 Carbohydrate-selective porin, OprB family BI313_10440 PF00528 Binding-protein-dependent transport system inner membrane component BI313_10445 PF00528 Binding-protein-dependent transport system inner membrane component BI313_10450 PF00005 ABC transporter BI313_10450 PF08402 TOBE domain BI313_10465 PF01192 RNA polymerase Rpb6 BI313_10470 PF00625 Guanylate kinase BI313_10475 PF08340 Domain of unknown function (DUF1732) BI313_10475 PF03755 YicC-like family, N-terminal region BI313_10480 PF03725 3' exoribonuclease family, domain 2 BI313_10480 PF01138 3' exoribonuclease family, domain 1 BI313_10490 PF01725 Ham1 family BI313_10495 PF04055 Radical SAM superfamily BI313_10495 PF06969 HemN C-terminal domain BI313_10510 PF00557 Metallopeptidase family M24 BI313_10525 PF05195 Aminopeptidase P, N-terminal domain BI313_10525 PF00557 Metallopeptidase family M24 BI313_10530 PF03695 Uncharacterised protein family (UPF0149) BI313_10540 PF05164 Cell division protein ZapA BI313_10550 PF01812 5-formyltetrahydrofolate cyclo-ligase family BI313_10560 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BI313_10570 PF13369 Transglutaminase-like superfamily BI313_10575 PF00301 Rubredoxin BI313_10580 PF02581 Thiamine monophosphate synthase BI313_10595 PF01464 Transglycosylase SLT domain BI313_10630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI313_10630 PF18269 T3SS EscN ATPase C-terminal domain BI313_10630 PF02874 ATP synthase alpha/beta family, beta-barrel domain BI313_10645 PF01514 Secretory protein of YscJ/FliF family BI313_10660 PF01312 FlhB HrpN YscU SpaS Family BI313_10665 PF00771 FHIPEP family BI313_10680 PF00813 FliP family BI313_10685 PF01313 Bacterial export proteins, family 3 BI313_10770 PF05819 NolX protein BI313_10785 PF01527 Transposase BI313_10790 PF13683 Integrase core domain BI313_10790 PF13276 HTH-like domain BI313_10800 PF00202 Aminotransferase class-III BI313_10810 PF00127 Copper binding proteins, plastocyanin/azurin family BI313_10815 PF00155 Aminotransferase class I and II BI313_10825 PF00034 Cytochrome c BI313_10825 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BI313_10830 PF01593 Flavin containing amine oxidoreductase BI313_10845 PF00202 Aminotransferase class-III BI313_10850 PF00027 Cyclic nucleotide-binding domain BI313_10850 PF00520 Ion transport protein BI313_10880 PF01569 PAP2 superfamily BI313_10885 PF01062 Bestrophin, RFP-TM, chloride channel BI313_10895 PF01225 Mur ligase family, catalytic domain BI313_10895 PF02875 Mur ligase family, glutamate ligase domain BI313_10895 PF08245 Mur ligase middle domain BI313_10915 PF04610 TrbL/VirB6 plasmid conjugal transfer protein BI313_10940 PF13333 Integrase core domain BI313_10940 PF00665 Integrase core domain BI313_10940 PF13276 HTH-like domain BI313_10945 PF01527 Transposase BI313_10970 PF01527 Transposase BI313_10975 PF13333 Integrase core domain BI313_10975 PF13276 HTH-like domain BI313_10975 PF00665 Integrase core domain BI313_10985 PF04610 TrbL/VirB6 plasmid conjugal transfer protein BI313_11020 PF03030 Inorganic H+ pyrophosphatase BI313_11030 PF00719 Inorganic pyrophosphatase BI313_11040 PF00593 TonB dependent receptor BI313_11040 PF07715 TonB-dependent Receptor Plug Domain BI313_11045 PF12833 Helix-turn-helix domain BI313_11050 PF00486 Transcriptional regulatory protein, C terminal BI313_11050 PF18500 CadC C-terminal domain 1 BI313_11055 PF01964 Radical SAM ThiC family BI313_11055 PF13667 ThiC-associated domain BI313_11065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_11065 PF00672 HAMP domain BI313_11075 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BI313_11075 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BI313_11080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BI313_11080 PF00205 Thiamine pyrophosphate enzyme, central domain BI313_11080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BI313_11090 PF00291 Pyridoxal-phosphate dependent enzyme BI313_11095 PF08502 LeuA allosteric (dimerisation) domain BI313_11095 PF00682 HMGL-like BI313_11105 PF00180 Isocitrate/isopropylmalate dehydrogenase BI313_11110 PF08241 Methyltransferase domain BI313_11115 PF00694 Aconitase C-terminal domain BI313_11120 PF00330 Aconitase family (aconitate hydratase) BI313_11125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_11130 PF00990 Diguanylate cyclase, GGDEF domain BI313_11130 PF17151 Periplasmic sensor domain BI313_11145 PF02321 Outer membrane efflux protein BI313_11155 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BI313_11160 PF03279 Bacterial lipid A biosynthesis acyltransferase BI313_11185 PF00390 Malic enzyme, N-terminal domain BI313_11185 PF01515 Phosphate acetyl/butaryl transferase BI313_11185 PF03949 Malic enzyme, NAD binding domain BI313_11190 PF00375 Sodium:dicarboxylate symporter family BI313_11200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_11200 PF00512 His Kinase A (phospho-acceptor) domain BI313_11205 PF00593 TonB dependent receptor BI313_11205 PF07715 TonB-dependent Receptor Plug Domain BI313_11210 PF00248 Aldo/keto reductase family BI313_11225 PF00196 Bacterial regulatory proteins, luxR family BI313_11225 PF00072 Response regulator receiver domain BI313_11235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_11235 PF00512 His Kinase A (phospho-acceptor) domain BI313_11235 PF08521 Two-component sensor kinase N-terminal BI313_11240 PF00486 Transcriptional regulatory protein, C terminal BI313_11240 PF00072 Response regulator receiver domain BI313_11250 PF03600 Citrate transporter BI313_11255 PF00106 short chain dehydrogenase BI313_11260 PF00356 Bacterial regulatory proteins, lacI family BI313_11275 PF00128 Alpha amylase, catalytic domain BI313_11290 PF03193 RsgA GTPase BI313_11295 PF00155 Aminotransferase class I and II BI313_11310 PF01522 Polysaccharide deacetylase BI313_11315 PF00462 Glutaredoxin BI313_11330 PF01979 Amidohydrolase family BI313_11335 PF01979 Amidohydrolase family BI313_11375 PF02645 Uncharacterised protein, DegV family COG1307 BI313_11385 PF00756 Putative esterase BI313_11390 PF04828 Glutathione-dependent formaldehyde-activating enzyme BI313_11395 PF08240 Alcohol dehydrogenase GroES-like domain BI313_11395 PF00107 Zinc-binding dehydrogenase BI313_11400 PF02583 Metal-sensitive transcriptional repressor BI313_11405 PF03466 LysR substrate binding domain BI313_11405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_11420 PF00486 Transcriptional regulatory protein, C terminal BI313_11420 PF00072 Response regulator receiver domain BI313_11425 PF00672 HAMP domain BI313_11425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_11425 PF00512 His Kinase A (phospho-acceptor) domain BI313_11435 PF04107 Glutamate-cysteine ligase family 2(GCS2) BI313_11445 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BI313_11445 PF12833 Helix-turn-helix domain BI313_11455 PF01926 50S ribosome-binding GTPase BI313_11460 PF00034 Cytochrome c BI313_11465 PF01323 DSBA-like thioredoxin domain BI313_11470 PF01323 DSBA-like thioredoxin domain BI313_11480 PF02028 BCCT, betaine/carnitine/choline family transporter BI313_11485 PF00171 Aldehyde dehydrogenase family BI313_11490 PF05199 GMC oxidoreductase BI313_11490 PF00732 GMC oxidoreductase BI313_11505 PF01494 FAD binding domain BI313_11510 PF00593 TonB dependent receptor BI313_11510 PF07715 TonB-dependent Receptor Plug Domain BI313_11515 PF01464 Transglycosylase SLT domain BI313_11515 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BI313_11520 PF00544 Pectate lyase BI313_11540 PF01066 CDP-alcohol phosphatidyltransferase BI313_11550 PF03129 Anticodon binding domain BI313_11550 PF04073 Aminoacyl-tRNA editing domain BI313_11550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BI313_11555 PF00816 H-NS histone family BI313_11565 PF02405 Permease MlaE BI313_11570 PF00005 ABC transporter BI313_11575 PF02470 MlaD protein BI313_11575 PF03886 ABC-type transport auxiliary lipoprotein component BI313_11605 PF01144 Coenzyme A transferase BI313_11610 PF01144 Coenzyme A transferase BI313_11615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BI313_11615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BI313_11615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BI313_11615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BI313_11620 PF00483 Nucleotidyl transferase BI313_11620 PF01050 Mannose-6-phosphate isomerase BI313_11625 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BI313_11625 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BI313_11625 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BI313_11630 PF04321 RmlD substrate binding domain BI313_11635 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BI313_11640 PF00483 Nucleotidyl transferase BI313_11645 PF16363 GDP-mannose 4,6 dehydratase BI313_11650 PF01012 Electron transfer flavoprotein domain BI313_11655 PF01012 Electron transfer flavoprotein domain BI313_11655 PF00766 Electron transfer flavoprotein FAD-binding domain BI313_11660 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BI313_11665 PF00535 Glycosyl transferase family 2 BI313_11670 PF00132 Bacterial transferase hexapeptide (six repeats) BI313_11700 PF00005 ABC transporter BI313_11705 PF01061 ABC-2 type transporter BI313_11710 PF01053 Cys/Met metabolism PLP-dependent enzyme BI313_11715 PF00571 CBS domain BI313_11715 PF00291 Pyridoxal-phosphate dependent enzyme BI313_11735 PF00437 Type II/IV secretion system protein BI313_11745 PF02798 Glutathione S-transferase, N-terminal domain BI313_11745 PF14497 Glutathione S-transferase, C-terminal domain BI313_11760 PF00271 Helicase conserved C-terminal domain BI313_11760 PF00270 DEAD/DEAH box helicase BI313_11765 PF01242 6-pyruvoyl tetrahydropterin synthase BI313_11780 PF13185 GAF domain BI313_11795 PF13419 Haloacid dehalogenase-like hydrolase BI313_11805 PF11799 impB/mucB/samB family C-terminal domain BI313_11805 PF00817 impB/mucB/samB family BI313_11810 PF07977 FabA-like domain BI313_11815 PF02801 Beta-ketoacyl synthase, C-terminal domain BI313_11815 PF00109 Beta-ketoacyl synthase, N-terminal domain BI313_11825 PF01432 Peptidase family M3 BI313_11840 PF07732 Multicopper oxidase BI313_11840 PF07731 Multicopper oxidase BI313_11840 PF00394 Multicopper oxidase BI313_11845 PF05275 Copper resistance protein B precursor (CopB) BI313_11850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BI313_11865 PF13333 Integrase core domain BI313_11865 PF00665 Integrase core domain BI313_11865 PF13276 HTH-like domain BI313_11870 PF01527 Transposase BI313_11885 PF01380 SIS domain BI313_11890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI313_11895 PF02687 FtsX-like permease family BI313_11895 PF00005 ABC transporter BI313_11895 PF12704 MacB-like periplasmic core domain BI313_11905 PF12704 MacB-like periplasmic core domain BI313_11905 PF00005 ABC transporter BI313_11905 PF02687 FtsX-like permease family BI313_11915 PF00158 Sigma-54 interaction domain BI313_11915 PF00072 Response regulator receiver domain BI313_11915 PF02954 Bacterial regulatory protein, Fis family BI313_11920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_11920 PF00512 His Kinase A (phospho-acceptor) domain BI313_11930 PF12804 MobA-like NTP transferase domain BI313_11930 PF14602 Hexapeptide repeat of succinyl-transferase BI313_11930 PF00132 Bacterial transferase hexapeptide (six repeats) BI313_11940 PF01817 Chorismate mutase type II BI313_11945 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BI313_11945 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BI313_11950 PF02874 ATP synthase alpha/beta family, beta-barrel domain BI313_11950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI313_11955 PF00231 ATP synthase BI313_11960 PF02874 ATP synthase alpha/beta family, beta-barrel domain BI313_11960 PF00306 ATP synthase alpha/beta chain, C terminal domain BI313_11960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI313_11965 PF00213 ATP synthase delta (OSCP) subunit BI313_11970 PF00430 ATP synthase B/B' CF(0) BI313_11975 PF00137 ATP synthase subunit C BI313_11980 PF00119 ATP synthase A chain BI313_11995 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI313_11995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BI313_12005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BI313_12005 PF02817 e3 binding domain BI313_12005 PF00364 Biotin-requiring enzyme BI313_12030 PF03180 NLPA lipoprotein BI313_12035 PF00528 Binding-protein-dependent transport system inner membrane component BI313_12040 PF00005 ABC transporter BI313_12040 PF09383 NIL domain BI313_12045 PF00892 EamA-like transporter family BI313_12050 PF04461 Protein of unknown function (DUF520) BI313_12060 PF00512 His Kinase A (phospho-acceptor) domain BI313_12060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_12060 PF00072 Response regulator receiver domain BI313_12060 PF09308 LuxQ, periplasmic BI313_12080 PF13419 Haloacid dehalogenase-like hydrolase BI313_12085 PF01479 S4 domain BI313_12085 PF00849 RNA pseudouridylate synthase BI313_12090 PF05175 Methyltransferase small domain BI313_12090 PF08468 Methyltransferase small domain N-terminal BI313_12100 PF07995 Glucose / Sorbosone dehydrogenase BI313_12110 PF00512 His Kinase A (phospho-acceptor) domain BI313_12110 PF09308 LuxQ, periplasmic BI313_12110 PF00072 Response regulator receiver domain BI313_12110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_12130 PF01168 Alanine racemase, N-terminal domain BI313_12130 PF00842 Alanine racemase, C-terminal domain BI313_12135 PF01266 FAD dependent oxidoreductase BI313_12140 PF01037 Lrp/AsnC ligand binding domain BI313_12150 PF01641 SelR domain BI313_12160 PF01618 MotA/TolQ/ExbB proton channel family BI313_12165 PF00691 OmpA family BI313_12165 PF13677 Membrane MotB of proton-channel complex MotA/MotB BI313_12190 PF01061 ABC-2 type transporter BI313_12195 PF00005 ABC transporter BI313_12200 PF00999 Sodium/hydrogen exchanger family BI313_12220 PF02469 Fasciclin domain BI313_12225 PF03167 Uracil DNA glycosylase superfamily BI313_12240 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BI313_12245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_12245 PF03466 LysR substrate binding domain BI313_12250 PF03358 NADPH-dependent FMN reductase BI313_12255 PF00248 Aldo/keto reductase family BI313_12265 PF05649 Peptidase family M13 BI313_12265 PF01431 Peptidase family M13 BI313_12285 PF13520 Amino acid permease BI313_12295 PF04397 LytTr DNA-binding domain BI313_12295 PF00072 Response regulator receiver domain BI313_12300 PF07694 5TMR of 5TMR-LYT BI313_12300 PF06580 Histidine kinase BI313_12315 PF05974 Domain of unknown function (DUF892) BI313_12320 PF05067 Manganese containing catalase BI313_12335 PF01739 CheR methyltransferase, SAM binding domain BI313_12335 PF03705 CheR methyltransferase, all-alpha domain BI313_12335 PF08448 PAS fold BI313_12335 PF01339 CheB methylesterase BI313_12350 PF02954 Bacterial regulatory protein, Fis family BI313_12350 PF00158 Sigma-54 interaction domain BI313_12350 PF00072 Response regulator receiver domain BI313_12370 PF02322 Cytochrome bd terminal oxidase subunit II BI313_12395 PF00107 Zinc-binding dehydrogenase BI313_12395 PF08240 Alcohol dehydrogenase GroES-like domain BI313_12395 PF13823 Alcohol dehydrogenase GroES-associated BI313_12425 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BI313_12425 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BI313_12470 PF00005 ABC transporter BI313_12475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_12475 PF03466 LysR substrate binding domain BI313_12480 PF01042 Endoribonuclease L-PSP BI313_12515 PF00654 Voltage gated chloride channel BI313_12525 PF00557 Metallopeptidase family M24 BI313_12535 PF01638 HxlR-like helix-turn-helix BI313_12545 PF02630 SCO1/SenC BI313_12555 PF00857 Isochorismatase family BI313_12560 PF12833 Helix-turn-helix domain BI313_12560 PF02311 AraC-like ligand binding domain BI313_12595 PF01850 PIN domain BI313_12605 PF13091 PLD-like domain BI313_12605 PF13087 AAA domain BI313_12640 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system BI313_12645 PF04610 TrbL/VirB6 plasmid conjugal transfer protein BI313_12660 PF07996 Type IV secretion system proteins BI313_12755 PF00589 Phage integrase family BI313_12755 PF13356 Arm DNA-binding domain BI313_12770 PF00140 Sigma-70 factor, region 1.2 BI313_12770 PF04539 Sigma-70 region 3 BI313_12770 PF04545 Sigma-70, region 4 BI313_12770 PF04546 Sigma-70, non-essential region BI313_12770 PF03979 Sigma-70 factor, region 1.1 BI313_12770 PF04542 Sigma-70 region 2 BI313_12775 PF02580 D-Tyr-tRNA(Tyr) deacylase BI313_12780 PF03279 Bacterial lipid A biosynthesis acyltransferase BI313_12785 PF00583 Acetyltransferase (GNAT) family BI313_12790 PF00925 GTP cyclohydrolase II BI313_12810 PF00535 Glycosyl transferase family 2 BI313_12825 PF01189 16S rRNA methyltransferase RsmB/F BI313_12825 PF01029 NusB family BI313_12830 PF02911 Formyl transferase, C-terminal domain BI313_12830 PF00551 Formyl transferase BI313_12835 PF01327 Polypeptide deformylase BI313_12840 PF01476 LysM domain BI313_12845 PF17782 DprA winged helix domain BI313_12845 PF02481 DNA recombination-mediator protein A BI313_12850 PF04361 Protein of unknown function (DUF494) BI313_12855 PF00114 Pilin (bacterial filament) BI313_12855 PF07963 Prokaryotic N-terminal methylation motif BI313_12865 PF01131 DNA topoisomerase BI313_12865 PF01751 Toprim domain BI313_12865 PF13368 Topoisomerase C-terminal repeat BI313_12870 PF01300 Telomere recombination BI313_12895 PF01343 Peptidase family S49 BI313_12900 PF01554 MatE BI313_12920 PF00270 DEAD/DEAH box helicase BI313_12920 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BI313_12920 PF18074 Primosomal protein N C-terminal domain BI313_12920 PF00271 Helicase conserved C-terminal domain BI313_12920 PF17764 3′ DNA-binding domain (3′BD) BI313_12925 PF00043 Glutathione S-transferase, C-terminal domain BI313_12925 PF13417 Glutathione S-transferase, N-terminal domain BI313_12940 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI313_12945 PF03458 UPF0126 domain BI313_12950 PF04545 Sigma-70, region 4 BI313_12950 PF04542 Sigma-70 region 2 BI313_12955 PF03167 Uracil DNA glycosylase superfamily BI313_12960 PF00072 Response regulator receiver domain BI313_12960 PF01339 CheB methylesterase BI313_12965 PF18075 FtsX extracellular domain BI313_12970 PF00005 ABC transporter BI313_12975 PF00270 DEAD/DEAH box helicase BI313_12975 PF00271 Helicase conserved C-terminal domain BI313_12975 PF12300 ATP-dependent RNA helicase RhlB BI313_12980 PF00085 Thioredoxin BI313_12985 PF07498 Rho termination factor, N-terminal domain BI313_12985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BI313_12985 PF07497 Rho termination factor, RNA-binding domain BI313_12995 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) BI313_13000 PF03466 LysR substrate binding domain BI313_13000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_13010 PF03971 Monomeric isocitrate dehydrogenase BI313_13020 PF04972 BON domain BI313_13020 PF01476 LysM domain BI313_13025 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BI313_13025 PF14489 QueF-like protein BI313_13030 PF07687 Peptidase dimerisation domain BI313_13030 PF01546 Peptidase family M20/M25/M40 BI313_13035 PF13533 Biotin-lipoyl like BI313_13040 PF00873 AcrB/AcrD/AcrF family BI313_13045 PF00873 AcrB/AcrD/AcrF family BI313_13060 PF07063 Domain of unknown function (DUF1338) BI313_13100 PF01427 D-ala-D-ala dipeptidase BI313_13105 PF01510 N-acetylmuramoyl-L-alanine amidase BI313_13115 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BI313_13115 PF13378 Enolase C-terminal domain-like BI313_13125 PF13520 Amino acid permease BI313_13140 PF05360 yiaA/B two helix domain BI313_13145 PF07995 Glucose / Sorbosone dehydrogenase BI313_13150 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI313_13150 PF00933 Glycosyl hydrolase family 3 N terminal domain BI313_13150 PF14310 Fibronectin type III-like domain BI313_13155 PF02152 Dihydroneopterin aldolase BI313_13160 PF00814 Glycoprotease family BI313_13165 PF01165 Ribosomal protein S21 BI313_13170 PF09424 Yqey-like protein BI313_13175 PF03631 Virulence factor BrkB BI313_13180 PF08275 DNA primase catalytic core, N-terminal domain BI313_13180 PF08278 DNA primase DnaG DnaB-binding BI313_13180 PF01807 CHC2 zinc finger BI313_13180 PF10410 DnaB-helicase binding domain of primase BI313_13195 PF13593 SBF-like CPA transporter family (DUF4137) BI313_13205 PF01040 UbiA prenyltransferase family BI313_13230 PF00510 Cytochrome c oxidase subunit III BI313_13235 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BI313_13240 PF00115 Cytochrome C and Quinol oxidase polypeptide I BI313_13245 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BI313_13245 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BI313_13255 PF00171 Aldehyde dehydrogenase family BI313_13255 PF14850 DNA-binding domain of Proline dehydrogenase BI313_13255 PF01619 Proline dehydrogenase BI313_13255 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BI313_13285 PF00579 tRNA synthetases class I (W and Y) BI313_13290 PF04225 Opacity-associated protein A LysM-like domain BI313_13290 PF01551 Peptidase family M23 BI313_13295 PF03702 Anhydro-N-acetylmuramic acid kinase BI313_13305 PF07690 Major Facilitator Superfamily BI313_13315 PF03372 Endonuclease/Exonuclease/phosphatase family BI313_13320 PF00156 Phosphoribosyl transferase domain BI313_13330 PF13614 AAA domain BI313_13335 PF02195 ParB-like nuclease domain BI313_13335 PF17762 HTH domain found in ParB protein BI313_13350 PF01370 NAD dependent epimerase/dehydratase family BI313_13355 PF00535 Glycosyl transferase family 2 BI313_13370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BI313_13370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BI313_13370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BI313_13370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BI313_13375 PF00692 dUTPase BI313_13380 PF02441 Flavoprotein BI313_13380 PF04127 DNA / pantothenate metabolism flavoprotein BI313_13385 PF04002 RadC-like JAB domain BI313_13390 PF03485 Arginyl tRNA synthetase N terminal domain BI313_13390 PF05746 DALR anticodon binding domain BI313_13390 PF00750 tRNA synthetases class I (R) BI313_13405 PF00106 short chain dehydrogenase BI313_13410 PF01757 Acyltransferase family BI313_13425 PF03033 Glycosyltransferase family 28 N-terminal domain BI313_13430 PF00550 Phosphopantetheine attachment site BI313_13430 PF00501 AMP-binding enzyme BI313_13430 PF00975 Thioesterase domain BI313_13430 PF13193 AMP-binding enzyme C-terminal domain BI313_13430 PF00668 Condensation domain BI313_13435 PF17944 Arginine decarboxylase C-terminal helical extension BI313_13435 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BI313_13435 PF17810 Arginine decarboxylase helical bundle domain BI313_13440 PF17284 Spermidine synthase tetramerisation domain BI313_13460 PF07555 beta-N-acetylglucosaminidase BI313_13460 PF02838 Glycosyl hydrolase family 20, domain 2 BI313_13460 PF00754 F5/8 type C domain BI313_13460 PF00963 Cohesin domain BI313_13460 PF00041 Fibronectin type III domain BI313_13470 PF00543 Nitrogen regulatory protein P-II BI313_13475 PF04380 Membrane fusogenic activity BI313_13480 PF01078 Magnesium chelatase, subunit ChlI BI313_13480 PF13335 Magnesium chelatase, subunit ChlI C-terminal BI313_13495 PF00563 EAL domain BI313_13495 PF12792 CSS motif domain associated with EAL BI313_13500 PF00487 Fatty acid desaturase BI313_13505 PF00970 Oxidoreductase FAD-binding domain BI313_13505 PF00111 2Fe-2S iron-sulfur cluster binding domain BI313_13505 PF00175 Oxidoreductase NAD-binding domain BI313_13510 PF00440 Bacterial regulatory proteins, tetR family BI313_13525 PF01139 tRNA-splicing ligase RtcB BI313_13565 PF01370 NAD dependent epimerase/dehydratase family BI313_13565 PF08338 Domain of unknown function (DUF1731) BI313_13570 PF00072 Response regulator receiver domain BI313_13570 PF00486 Transcriptional regulatory protein, C terminal BI313_13575 PF08521 Two-component sensor kinase N-terminal BI313_13575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_13575 PF00512 His Kinase A (phospho-acceptor) domain BI313_13595 PF13180 PDZ domain BI313_13595 PF00595 PDZ domain BI313_13615 PF01594 AI-2E family transporter BI313_13625 PF02789 Cytosol aminopeptidase family, N-terminal domain BI313_13625 PF00883 Cytosol aminopeptidase family, catalytic domain BI313_13635 PF08281 Sigma-70, region 4 BI313_13635 PF04542 Sigma-70 region 2 BI313_13640 PF00199 Catalase BI313_13655 PF00196 Bacterial regulatory proteins, luxR family BI313_13655 PF00072 Response regulator receiver domain BI313_13665 PF07730 Histidine kinase BI313_13670 PF13533 Biotin-lipoyl like BI313_13675 PF00005 ABC transporter BI313_13695 PF00892 EamA-like transporter family BI313_13700 PF00892 EamA-like transporter family BI313_13715 PF00753 Metallo-beta-lactamase superfamily BI313_13720 PF00579 tRNA synthetases class I (W and Y) BI313_13725 PF05532 CsbD-like BI313_13740 PF00491 Arginase family BI313_13765 PF02223 Thymidylate kinase BI313_13780 PF03309 Type III pantothenate kinase BI313_13785 PF02237 Biotin protein ligase C terminal domain BI313_13785 PF03099 Biotin/lipoate A/B protein ligase family BI313_13785 PF08279 HTH domain BI313_13795 PF06167 Glucose-regulated metallo-peptidase M90 BI313_13810 PF00512 His Kinase A (phospho-acceptor) domain BI313_13810 PF00672 HAMP domain BI313_13810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_13815 PF00072 Response regulator receiver domain BI313_13815 PF00486 Transcriptional regulatory protein, C terminal BI313_13825 PF01207 Dihydrouridine synthase (Dus) BI313_13845 PF00199 Catalase BI313_13845 PF06628 Catalase-related immune-responsive BI313_13850 PF06733 DEAD_2 BI313_13850 PF13307 Helicase C-terminal domain BI313_13865 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BI313_13865 PF01488 Shikimate / quinate 5-dehydrogenase BI313_13865 PF08501 Shikimate dehydrogenase substrate binding domain BI313_13875 PF00175 Oxidoreductase NAD-binding domain BI313_13875 PF00258 Flavodoxin BI313_13875 PF00667 FAD binding domain BI313_13880 PF00490 Delta-aminolevulinic acid dehydratase BI313_13910 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BI313_13910 PF00326 Prolyl oligopeptidase family BI313_13915 PF02798 Glutathione S-transferase, N-terminal domain BI313_13915 PF00043 Glutathione S-transferase, C-terminal domain BI313_13935 PF04820 Tryptophan halogenase BI313_13950 PF00005 ABC transporter BI313_13960 PF01381 Helix-turn-helix BI313_13970 PF01229 Glycosyl hydrolases family 39 BI313_13975 PF02583 Metal-sensitive transcriptional repressor BI313_13980 PF01545 Cation efflux family BI313_13985 PF00970 Oxidoreductase FAD-binding domain BI313_13985 PF00111 2Fe-2S iron-sulfur cluster binding domain BI313_13985 PF00175 Oxidoreductase NAD-binding domain BI313_13990 PF00005 ABC transporter BI313_13995 PF01061 ABC-2 type transporter BI313_14000 PF02558 Ketopantoate reductase PanE/ApbA BI313_14000 PF08546 Ketopantoate reductase PanE/ApbA C terminal BI313_14010 PF03061 Thioesterase superfamily BI313_14015 PF00085 Thioredoxin BI313_14030 PF00268 Ribonucleotide reductase, small chain BI313_14035 PF03477 ATP cone domain BI313_14035 PF02867 Ribonucleotide reductase, barrel domain BI313_14035 PF00317 Ribonucleotide reductase, all-alpha domain BI313_14060 PF13607 Succinyl-CoA ligase like flavodoxin domain BI313_14060 PF00583 Acetyltransferase (GNAT) family BI313_14060 PF13380 CoA binding domain BI313_14065 PF00571 CBS domain BI313_14065 PF01769 Divalent cation transporter BI313_14065 PF03448 MgtE intracellular N domain BI313_14070 PF00999 Sodium/hydrogen exchanger family BI313_14070 PF02254 TrkA-N domain BI313_14075 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BI313_14075 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BI313_14080 PF00723 Glycosyl hydrolases family 15 BI313_14085 PF01451 Low molecular weight phosphotyrosine protein phosphatase BI313_14095 PF05166 YcgL domain BI313_14100 PF02801 Beta-ketoacyl synthase, C-terminal domain BI313_14100 PF00109 Beta-ketoacyl synthase, N-terminal domain BI313_14160 PF07977 FabA-like domain BI313_14165 PF01553 Acyltransferase BI313_14175 PF00550 Phosphopantetheine attachment site BI313_14180 PF04820 Tryptophan halogenase BI313_14225 PF01218 Coproporphyrinogen III oxidase BI313_14230 PF01367 5'-3' exonuclease, C-terminal SAM fold BI313_14230 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BI313_14230 PF00476 DNA polymerase family A BI313_14230 PF01612 3'-5' exonuclease BI313_14260 PF00069 Protein kinase domain BI313_14280 PF13677 Membrane MotB of proton-channel complex MotA/MotB BI313_14280 PF00691 OmpA family BI313_14290 PF00248 Aldo/keto reductase family BI313_14295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_14295 PF03466 LysR substrate binding domain BI313_14315 PF04717 Type VI secretion system, phage-baseplate injector BI313_14330 PF03793 PASTA domain BI313_14330 PF00069 Protein kinase domain BI313_14345 PF13417 Glutathione S-transferase, N-terminal domain BI313_14380 PF17871 AAA lid domain BI313_14380 PF00004 ATPase family associated with various cellular activities (AAA) BI313_14380 PF10431 C-terminal, D2-small domain, of ClpB protein BI313_14380 PF07724 AAA domain (Cdc48 subfamily) BI313_14410 PF05638 Type VI secretion system effector, Hcp BI313_14435 PF14602 Hexapeptide repeat of succinyl-transferase BI313_14435 PF12464 Maltose acetyltransferase BI313_14440 PF13361 UvrD-like helicase C-terminal domain BI313_14440 PF00580 UvrD/REP helicase N-terminal domain BI313_14455 PF13091 PLD-like domain BI313_14455 PF13396 Phospholipase_D-nuclease N-terminal BI313_14460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_14460 PF03466 LysR substrate binding domain BI313_14465 PF03737 Aldolase/RraA BI313_14470 PF04303 PrpF protein BI313_14475 PF04909 Amidohydrolase BI313_14480 PF00471 Ribosomal protein L33 BI313_14485 PF00830 Ribosomal L28 family BI313_14490 PF00873 AcrB/AcrD/AcrF family BI313_14495 PF00529 HlyD membrane-fusion protein of T1SS BI313_14495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI313_14515 PF02527 rRNA small subunit methyltransferase G BI313_14520 PF09423 PhoD-like phosphatase BI313_14520 PF16655 PhoD-like phosphatase, N-terminal domain BI313_14525 PF01648 4'-phosphopantetheinyl transferase superfamily BI313_14560 PF04341 Protein of unknown function, DUF485 BI313_14570 PF13193 AMP-binding enzyme C-terminal domain BI313_14570 PF00501 AMP-binding enzyme BI313_14570 PF16177 Acetyl-coenzyme A synthetase N-terminus BI313_14575 PF00196 Bacterial regulatory proteins, luxR family BI313_14575 PF00072 Response regulator receiver domain BI313_14600 PF04616 Glycosyl hydrolases family 43 BI313_14600 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BI313_14605 PF00248 Aldo/keto reductase family BI313_14620 PF01557 Fumarylacetoacetate (FAA) hydrolase family BI313_14625 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BI313_14625 PF13378 Enolase C-terminal domain-like BI313_14630 PF05336 L-rhamnose mutarotase BI313_14635 PF07690 Major Facilitator Superfamily BI313_14640 PF09339 IclR helix-turn-helix domain BI313_14640 PF01614 Bacterial transcriptional regulator BI313_14645 PF02659 Putative manganese efflux pump BI313_14650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_14650 PF09456 RcsC Alpha-Beta-Loop (ABL) BI313_14650 PF00072 Response regulator receiver domain BI313_14650 PF00512 His Kinase A (phospho-acceptor) domain BI313_14665 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BI313_14665 PF06165 Glycosyltransferase family 36 BI313_14680 PF01011 PQQ enzyme repeat BI313_14680 PF13360 PQQ-like domain BI313_14680 PF13570 PQQ-like domain BI313_14705 PF01103 Surface antigen BI313_14705 PF17243 POTRA domain TamA domain 1 BI313_14710 PF00593 TonB dependent receptor BI313_14710 PF07715 TonB-dependent Receptor Plug Domain BI313_14715 PF13181 Tetratricopeptide repeat BI313_14720 PF02092 Glycyl-tRNA synthetase beta subunit BI313_14720 PF05746 DALR anticodon binding domain BI313_14725 PF02091 Glycyl-tRNA synthetase alpha subunit BI313_14730 PF00437 Type II/IV secretion system protein BI313_14730 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BI313_14740 PF00958 GMP synthase C terminal domain BI313_14740 PF00117 Glutamine amidotransferase class-I BI313_14755 PF00902 Sec-independent protein translocase protein (TatC) BI313_14760 PF02416 mttA/Hcf106 family BI313_14765 PF02416 mttA/Hcf106 family BI313_14775 PF00762 Ferrochelatase BI313_14780 PF12697 Alpha/beta hydrolase family BI313_14795 PF04381 Putative exonuclease, RdgC BI313_14800 PF01171 PP-loop family BI313_14815 PF00356 Bacterial regulatory proteins, lacI family BI313_14820 PF07488 Glycosyl hydrolase family 67 middle domain BI313_14820 PF03648 Glycosyl hydrolase family 67 N-terminus BI313_14820 PF07477 Glycosyl hydrolase family 67 C-terminus BI313_14830 PF13378 Enolase C-terminal domain-like BI313_14830 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BI313_14835 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BI313_14835 PF04616 Glycosyl hydrolases family 43 BI313_14840 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI313_14840 PF07691 PA14 domain BI313_14840 PF14310 Fibronectin type III-like domain BI313_14840 PF00933 Glycosyl hydrolase family 3 N terminal domain BI313_14845 PF01232 Mannitol dehydrogenase Rossmann domain BI313_14845 PF08125 Mannitol dehydrogenase C-terminal domain BI313_14870 PF01344 Kelch motif BI313_14875 PF08450 SMP-30/Gluconolactonase/LRE-like region BI313_14880 PF00331 Glycosyl hydrolase family 10 BI313_14885 PF02837 Glycosyl hydrolases family 2, sugar binding domain BI313_14885 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BI313_14885 PF00703 Glycosyl hydrolases family 2 BI313_14885 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BI313_14885 PF16355 Domain of unknown function (DUF4982) BI313_14890 PF02614 Glucuronate isomerase BI313_14895 PF00553 Cellulose binding domain BI313_14895 PF00331 Glycosyl hydrolase family 10 BI313_14895 PF03422 Carbohydrate binding module (family 6) BI313_14915 PF04616 Glycosyl hydrolases family 43 BI313_14950 PF00698 Acyl transferase domain BI313_14950 PF08240 Alcohol dehydrogenase GroES-like domain BI313_14950 PF16197 Ketoacyl-synthetase C-terminal extension BI313_14950 PF00109 Beta-ketoacyl synthase, N-terminal domain BI313_14950 PF02801 Beta-ketoacyl synthase, C-terminal domain BI313_14950 PF08659 KR domain BI313_14950 PF00550 Phosphopantetheine attachment site BI313_14950 PF14765 Polyketide synthase dehydratase BI313_14955 PF01553 Acyltransferase BI313_14965 PF00356 Bacterial regulatory proteins, lacI family BI313_14980 PF04820 Tryptophan halogenase BI313_14985 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BI313_14990 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BI313_14995 PF04337 Protein of unknown function, DUF480 BI313_15010 PF00580 UvrD/REP helicase N-terminal domain BI313_15010 PF13361 UvrD-like helicase C-terminal domain BI313_15015 PF00265 Thymidine kinase BI313_15020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_15020 PF08446 PAS fold BI313_15020 PF01590 GAF domain BI313_15020 PF00512 His Kinase A (phospho-acceptor) domain BI313_15020 PF00360 Phytochrome region BI313_15025 PF04349 Periplasmic glucan biosynthesis protein, MdoG BI313_15035 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BI313_15035 PF06827 Zinc finger found in FPG and IleRS BI313_15035 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BI313_15065 PF03594 Benzoate membrane transport protein BI313_15070 PF13426 PAS domain BI313_15070 PF00360 Phytochrome region BI313_15070 PF08446 PAS fold BI313_15070 PF01590 GAF domain BI313_15075 PF01126 Heme oxygenase BI313_15080 PF07690 Major Facilitator Superfamily BI313_15085 PF01263 Aldose 1-epimerase BI313_15095 PF02810 SEC-C motif BI313_15100 PF01925 Sulfite exporter TauE/SafE BI313_15120 PF01227 GTP cyclohydrolase I BI313_15130 PF07869 Protein of unknown function (DUF1656) BI313_15135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI313_15135 PF00529 HlyD membrane-fusion protein of T1SS BI313_15140 PF02321 Outer membrane efflux protein BI313_15145 PF04632 Fusaric acid resistance protein family BI313_15150 PF00083 Sugar (and other) transporter BI313_15160 PF13396 Phospholipase_D-nuclease N-terminal BI313_15160 PF13091 PLD-like domain BI313_15220 PF00849 RNA pseudouridylate synthase BI313_15225 PF01527 Transposase BI313_15230 PF13276 HTH-like domain BI313_15230 PF13683 Integrase core domain BI313_15255 PF01381 Helix-turn-helix BI313_15260 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB BI313_15265 PF13538 UvrD-like helicase C-terminal domain BI313_15270 PF13361 UvrD-like helicase C-terminal domain BI313_15270 PF00580 UvrD/REP helicase N-terminal domain BI313_15270 PF12705 PD-(D/E)XK nuclease superfamily BI313_15275 PF17946 RecC C-terminal domain BI313_15315 PF00005 ABC transporter BI313_15320 PF02405 Permease MlaE BI313_15325 PF02470 MlaD protein BI313_15330 PF05494 MlaC protein BI313_15340 PF04333 MlaA lipoprotein BI313_15350 PF00255 Glutathione peroxidase BI313_15360 PF02646 RmuC family BI313_15365 PF00107 Zinc-binding dehydrogenase BI313_15365 PF08240 Alcohol dehydrogenase GroES-like domain BI313_15370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_15370 PF03466 LysR substrate binding domain BI313_15380 PF00043 Glutathione S-transferase, C-terminal domain BI313_15380 PF13417 Glutathione S-transferase, N-terminal domain BI313_15390 PF13520 Amino acid permease BI313_15395 PF07971 Glycosyl hydrolase family 92 BI313_15395 PF17678 Glycosyl hydrolase family 92 N-terminal domain BI313_15400 PF07715 TonB-dependent Receptor Plug Domain BI313_15400 PF00593 TonB dependent receptor BI313_15405 PF10947 Protein of unknown function (DUF2628) BI313_15410 PF08448 PAS fold BI313_15410 PF00990 Diguanylate cyclase, GGDEF domain BI313_15415 PF02595 Glycerate kinase family BI313_15435 PF10672 S-adenosylmethionine-dependent methyltransferase BI313_15435 PF17785 PUA-like domain BI313_15445 PF03741 Integral membrane protein TerC family BI313_15455 PF01694 Rhomboid family BI313_15460 PF03009 Glycerophosphoryl diester phosphodiesterase family BI313_15470 PF01569 PAP2 superfamily BI313_15475 PF01926 50S ribosome-binding GTPase BI313_15475 PF10396 GTP-binding protein TrmE N-terminus BI313_15475 PF12631 MnmE helical domain BI313_15485 PF01522 Polysaccharide deacetylase BI313_15495 PF02096 60Kd inner membrane protein BI313_15495 PF14849 YidC periplasmic domain BI313_15500 PF00825 Ribonuclease P BI313_15505 PF00468 Ribosomal protein L34 BI313_15515 PF11638 DnaA N-terminal domain BI313_15515 PF00308 Bacterial dnaA protein BI313_15515 PF08299 Bacterial dnaA protein helix-turn-helix BI313_15520 PF02767 DNA polymerase III beta subunit, central domain BI313_15520 PF02768 DNA polymerase III beta subunit, C-terminal domain BI313_15520 PF00712 DNA polymerase III beta subunit, N-terminal domain BI313_15525 PF02463 RecF/RecN/SMC N terminal domain BI313_15530 PF01751 Toprim domain BI313_15530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_15530 PF18053 DNA gyrase B subunit insert domain BI313_15530 PF00986 DNA gyrase B subunit, carboxyl terminus BI313_15530 PF00204 DNA gyrase B BI313_15540 PF01435 Peptidase family M48 BI313_15550 PF03544 Gram-negative bacterial TonB protein C-terminal BI313_15555 PF01618 MotA/TolQ/ExbB proton channel family BI313_15560 PF02472 Biopolymer transport protein ExbD/TolR BI313_15565 PF02472 Biopolymer transport protein ExbD/TolR BI313_15575 PF02472 Biopolymer transport protein ExbD/TolR BI313_15585 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BI313_15595 PF13091 PLD-like domain BI313_15595 PF13396 Phospholipase_D-nuclease N-terminal BI313_15600 PF04055 Radical SAM superfamily BI313_15610 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BI313_15625 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BI313_15625 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BI313_15625 PF01842 ACT domain BI313_15630 PF03572 Peptidase family S41 BI313_15630 PF13180 PDZ domain BI313_15640 PF01551 Peptidase family M23 BI313_15650 PF04389 Peptidase family M28 BI313_15660 PF00150 Cellulase (glycosyl hydrolase family 5) BI313_15665 PF00150 Cellulase (glycosyl hydrolase family 5) BI313_15670 PF00150 Cellulase (glycosyl hydrolase family 5) BI313_15675 PF00107 Zinc-binding dehydrogenase BI313_15675 PF08240 Alcohol dehydrogenase GroES-like domain BI313_15685 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BI313_15685 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI313_15690 PF01493 GXGXG motif BI313_15690 PF01645 Conserved region in glutamate synthase BI313_15690 PF00310 Glutamine amidotransferases class-II BI313_15690 PF04898 Glutamate synthase central domain BI313_15710 PF01804 Penicillin amidase BI313_15725 PF03466 LysR substrate binding domain BI313_15725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_15800 PF00270 DEAD/DEAH box helicase BI313_15800 PF09369 Domain of unknown function (DUF1998) BI313_15800 PF00271 Helicase conserved C-terminal domain BI313_15805 PF03006 Haemolysin-III related BI313_15815 PF00043 Glutathione S-transferase, C-terminal domain BI313_15815 PF02798 Glutathione S-transferase, N-terminal domain BI313_15825 PF05649 Peptidase family M13 BI313_15825 PF01431 Peptidase family M13 BI313_15830 PF03466 LysR substrate binding domain BI313_15830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_15855 PF02525 Flavodoxin-like fold BI313_15865 PF01638 HxlR-like helix-turn-helix BI313_15900 PF05532 CsbD-like BI313_15905 PF08448 PAS fold BI313_15905 PF00512 His Kinase A (phospho-acceptor) domain BI313_15905 PF13188 PAS domain BI313_15905 PF00072 Response regulator receiver domain BI313_15905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_15945 PF00440 Bacterial regulatory proteins, tetR family BI313_15950 PF07690 Major Facilitator Superfamily BI313_15955 PF00293 NUDIX domain BI313_15955 PF13344 Haloacid dehalogenase-like hydrolase BI313_15965 PF01594 AI-2E family transporter BI313_15970 PF07859 alpha/beta hydrolase fold BI313_15980 PF00085 Thioredoxin BI313_15985 PF08946 Osmosensory transporter coiled coil BI313_15985 PF00083 Sugar (and other) transporter BI313_16030 PF17863 AAA lid domain BI313_16030 PF07726 ATPase family associated with various cellular activities (AAA) BI313_16065 PF06441 Epoxide hydrolase N terminus BI313_16075 PF00440 Bacterial regulatory proteins, tetR family BI313_16075 PF18665 Tetracyclin repressor-like, C-terminal domain BI313_16080 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BI313_16085 PF00155 Aminotransferase class I and II BI313_16090 PF07715 TonB-dependent Receptor Plug Domain BI313_16090 PF00593 TonB dependent receptor BI313_16105 PF00171 Aldehyde dehydrogenase family BI313_16110 PF08240 Alcohol dehydrogenase GroES-like domain BI313_16110 PF00107 Zinc-binding dehydrogenase BI313_16130 PF02735 Ku70/Ku80 beta-barrel domain BI313_16135 PF13298 DNA polymerase Ligase (LigD) BI313_16135 PF01068 ATP dependent DNA ligase domain BI313_16135 PF04679 ATP dependent DNA ligase C terminal region BI313_16140 PF01070 FMN-dependent dehydrogenase BI313_16155 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BI313_16160 PF07730 Histidine kinase BI313_16165 PF00072 Response regulator receiver domain BI313_16165 PF00196 Bacterial regulatory proteins, luxR family BI313_16175 PF00486 Transcriptional regulatory protein, C terminal BI313_16175 PF18500 CadC C-terminal domain 1 BI313_16180 PF07055 Enoyl reductase FAD binding domain BI313_16180 PF12241 Trans-2-enoyl-CoA reductase catalytic region BI313_16180 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BI313_16190 PF00294 pfkB family carbohydrate kinase BI313_16205 PF01095 Pectinesterase BI313_16290 PF13333 Integrase core domain BI313_16290 PF00665 Integrase core domain BI313_16290 PF13276 HTH-like domain BI313_16295 PF01527 Transposase BI313_16315 PF00128 Alpha amylase, catalytic domain BI313_16315 PF11896 Domain of unknown function (DUF3416) BI313_16320 PF00128 Alpha amylase, catalytic domain BI313_16320 PF16657 Maltogenic Amylase, C-terminal domain BI313_16325 PF00128 Alpha amylase, catalytic domain BI313_16325 PF02806 Alpha amylase, C-terminal all-beta domain BI313_16325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI313_16355 PF00248 Aldo/keto reductase family BI313_16360 PF13472 GDSL-like Lipase/Acylhydrolase family BI313_16365 PF00135 Carboxylesterase family BI313_16370 PF13472 GDSL-like Lipase/Acylhydrolase family BI313_16370 PF07859 alpha/beta hydrolase fold BI313_16380 PF03480 Bacterial extracellular solute-binding protein, family 7 BI313_16390 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BI313_16395 PF04616 Glycosyl hydrolases family 43 BI313_16395 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BI313_16400 PF00356 Bacterial regulatory proteins, lacI family BI313_16410 PF04962 KduI/IolB family BI313_16430 PF00657 GDSL-like Lipase/Acylhydrolase BI313_16440 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BI313_16445 PF01037 Lrp/AsnC ligand binding domain BI313_16450 PF00593 TonB dependent receptor BI313_16450 PF07660 Secretin and TonB N terminus short domain BI313_16450 PF07715 TonB-dependent Receptor Plug Domain BI313_16460 PF01734 Patatin-like phospholipase BI313_16470 PF00005 ABC transporter BI313_16485 PF00571 CBS domain BI313_16485 PF00005 ABC transporter BI313_16490 PF00528 Binding-protein-dependent transport system inner membrane component BI313_16500 PF12867 DinB superfamily BI313_16500 PF03781 Sulfatase-modifying factor enzyme 1 BI313_16505 PF10017 Histidine-specific methyltransferase, SAM-dependent BI313_16530 PF01883 Iron-sulfur cluster assembly protein BI313_16530 PF10609 NUBPL iron-transfer P-loop NTPase BI313_16540 PF04264 YceI-like domain BI313_16545 PF13091 PLD-like domain BI313_16555 PF03061 Thioesterase superfamily BI313_16575 PF01161 Phosphatidylethanolamine-binding protein BI313_16585 PF02673 Bacitracin resistance protein BacA BI313_16595 PF03951 Glutamine synthetase, beta-Grasp domain BI313_16595 PF00120 Glutamine synthetase, catalytic domain BI313_16600 PF00543 Nitrogen regulatory protein P-II BI313_16605 PF00909 Ammonium Transporter Family BI313_16610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_16610 PF00989 PAS fold BI313_16610 PF00512 His Kinase A (phospho-acceptor) domain BI313_16615 PF00072 Response regulator receiver domain BI313_16615 PF00158 Sigma-54 interaction domain BI313_16615 PF02954 Bacterial regulatory protein, Fis family BI313_16620 PF00080 Copper/zinc superoxide dismutase (SODC) BI313_16625 PF00080 Copper/zinc superoxide dismutase (SODC) BI313_16645 PF02803 Thiolase, C-terminal domain BI313_16645 PF00108 Thiolase, N-terminal domain BI313_16685 PF00581 Rhodanese-like domain BI313_16690 PF02556 Preprotein translocase subunit SecB BI313_16695 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BI313_16695 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BI313_16705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BI313_16705 PF00205 Thiamine pyrophosphate enzyme, central domain BI313_16705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BI313_16710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_16715 PF00072 Response regulator receiver domain BI313_16715 PF00158 Sigma-54 interaction domain BI313_16715 PF02954 Bacterial regulatory protein, Fis family BI313_16730 PF07690 Major Facilitator Superfamily BI313_16735 PF00588 SpoU rRNA Methylase family BI313_16750 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BI313_16750 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BI313_16755 PF02661 Fic/DOC family BI313_16755 PF13784 Fic/DOC family N-terminal BI313_16760 PF00561 alpha/beta hydrolase fold BI313_16765 PF03692 Putative zinc- or iron-chelating domain BI313_16770 PF00501 AMP-binding enzyme BI313_16775 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BI313_16790 PF07478 D-ala D-ala ligase C-terminus BI313_16790 PF01820 D-ala D-ala ligase N-terminus BI313_16800 PF03109 ABC1 family BI313_16810 PF00849 RNA pseudouridylate synthase BI313_16820 PF00472 RF-1 domain BI313_16840 PF01432 Peptidase family M3 BI313_16845 PF01432 Peptidase family M3 BI313_16855 PF12706 Beta-lactamase superfamily domain BI313_16870 PF12833 Helix-turn-helix domain BI313_16875 PF00999 Sodium/hydrogen exchanger family BI313_16885 PF01274 Malate synthase BI313_16890 PF00463 Isocitrate lyase family BI313_16895 PF00990 Diguanylate cyclase, GGDEF domain BI313_16895 PF17151 Periplasmic sensor domain BI313_16915 PF00326 Prolyl oligopeptidase family BI313_16920 PF02785 Biotin carboxylase C-terminal domain BI313_16920 PF00364 Biotin-requiring enzyme BI313_16920 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BI313_16920 PF00289 Biotin carboxylase, N-terminal domain BI313_16925 PF01039 Carboxyl transferase domain BI313_16930 PF02770 Acyl-CoA dehydrogenase, middle domain BI313_16930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI313_16930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI313_16990 PF02492 CobW/HypB/UreG, nucleotide-binding domain BI313_16990 PF07683 Cobalamin synthesis protein cobW C-terminal domain BI313_17015 PF03969 AFG1-like ATPase BI313_17020 PF01047 MarR family BI313_17025 PF02566 OsmC-like protein BI313_17030 PF07859 alpha/beta hydrolase fold BI313_17055 PF00248 Aldo/keto reductase family BI313_17060 PF16884 N-terminal domain of oxidoreductase BI313_17060 PF00107 Zinc-binding dehydrogenase BI313_17075 PF00849 RNA pseudouridylate synthase BI313_17085 PF00270 DEAD/DEAH box helicase BI313_17085 PF04408 Helicase associated domain (HA2) BI313_17085 PF00271 Helicase conserved C-terminal domain BI313_17085 PF08482 ATP-dependent helicase C-terminal BI313_17090 PF02203 Tar ligand binding domain homologue BI313_17090 PF00672 HAMP domain BI313_17090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_17095 PF07308 Protein of unknown function (DUF1456) BI313_17100 PF00576 HIUase/Transthyretin family BI313_17105 PF13454 FAD-NAD(P)-binding BI313_17110 PF01014 Uricase BI313_17110 PF09349 OHCU decarboxylase BI313_17125 PF00266 Aminotransferase class-V BI313_17130 PF07687 Peptidase dimerisation domain BI313_17130 PF01546 Peptidase family M20/M25/M40 BI313_17135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_17135 PF03466 LysR substrate binding domain BI313_17140 PF07690 Major Facilitator Superfamily BI313_17160 PF01425 Amidase BI313_17165 PF01156 Inosine-uridine preferring nucleoside hydrolase BI313_17175 PF00860 Permease family BI313_17180 PF00111 2Fe-2S iron-sulfur cluster binding domain BI313_17185 PF00355 Rieske [2Fe-2S] domain BI313_17190 PF03466 LysR substrate binding domain BI313_17190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_17195 PF01026 TatD related DNase BI313_17210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_17210 PF03466 LysR substrate binding domain BI313_17215 PF07690 Major Facilitator Superfamily BI313_17240 PF02146 Sir2 family BI313_17245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BI313_17250 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BI313_17250 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BI313_17260 PF00551 Formyl transferase BI313_17265 PF12852 Cupin BI313_17265 PF12833 Helix-turn-helix domain BI313_17270 PF00106 short chain dehydrogenase BI313_17285 PF03466 LysR substrate binding domain BI313_17285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_17290 PF03358 NADPH-dependent FMN reductase BI313_17300 PF01717 Cobalamin-independent synthase, Catalytic domain BI313_17300 PF08267 Cobalamin-independent synthase, N-terminal domain BI313_17305 PF03812 2-keto-3-deoxygluconate permease BI313_17320 PF00106 short chain dehydrogenase BI313_17325 PF08240 Alcohol dehydrogenase GroES-like domain BI313_17325 PF00107 Zinc-binding dehydrogenase BI313_17330 PF00550 Phosphopantetheine attachment site BI313_17330 PF00109 Beta-ketoacyl synthase, N-terminal domain BI313_17330 PF16197 Ketoacyl-synthetase C-terminal extension BI313_17330 PF08240 Alcohol dehydrogenase GroES-like domain BI313_17330 PF00698 Acyl transferase domain BI313_17330 PF14765 Polyketide synthase dehydratase BI313_17330 PF02801 Beta-ketoacyl synthase, C-terminal domain BI313_17330 PF08659 KR domain BI313_17355 PF01638 HxlR-like helix-turn-helix BI313_17425 PF00589 Phage integrase family BI313_17425 PF13495 Phage integrase, N-terminal SAM-like domain BI313_17430 PF00920 Dehydratase family BI313_17435 PF03692 Putative zinc- or iron-chelating domain BI313_17440 PF00132 Bacterial transferase hexapeptide (six repeats) BI313_17445 PF07690 Major Facilitator Superfamily BI313_17450 PF01966 HD domain BI313_17450 PF11871 Domain of unknown function (DUF3391) BI313_17470 PF00171 Aldehyde dehydrogenase family BI313_17475 PF00171 Aldehyde dehydrogenase family BI313_17480 PF12833 Helix-turn-helix domain BI313_17485 PF01494 FAD binding domain BI313_17495 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BI313_17495 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BI313_17500 PF00230 Major intrinsic protein BI313_17505 PF01266 FAD dependent oxidoreductase BI313_17505 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BI313_17510 PF00455 DeoR C terminal sensor domain BI313_17510 PF08220 DeoR-like helix-turn-helix domain BI313_17525 PF00355 Rieske [2Fe-2S] domain BI313_17530 PF01144 Coenzyme A transferase BI313_17535 PF01144 Coenzyme A transferase BI313_17540 PF00108 Thiolase, N-terminal domain BI313_17540 PF02803 Thiolase, C-terminal domain BI313_17545 PF00775 Dioxygenase BI313_17545 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BI313_17550 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BI313_17550 PF00775 Dioxygenase BI313_17555 PF10397 Adenylosuccinate lyase C-terminus BI313_17555 PF00206 Lyase BI313_17560 PF12146 Serine aminopeptidase, S33 BI313_17565 PF02627 Carboxymuconolactone decarboxylase family BI313_17575 PF09339 IclR helix-turn-helix domain BI313_17575 PF01614 Bacterial transcriptional regulator BI313_17585 PF07859 alpha/beta hydrolase fold BI313_17590 PF10677 Protein of unknown function (DUF2490) BI313_17595 PF13932 GidA associated domain BI313_17595 PF01134 Glucose inhibited division protein A BI313_17605 PF00291 Pyridoxal-phosphate dependent enzyme BI313_17605 PF13291 ACT domain BI313_17625 PF13649 Methyltransferase domain BI313_17635 PF12697 Alpha/beta hydrolase family BI313_17645 PF00155 Aminotransferase class I and II BI313_17650 PF06968 Biotin and Thiamin Synthesis associated domain BI313_17650 PF04055 Radical SAM superfamily BI313_17660 PF01040 UbiA prenyltransferase family BI313_17680 PF02203 Tar ligand binding domain homologue BI313_17680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_17680 PF00672 HAMP domain BI313_17695 PF12795 Mechanosensitive ion channel porin domain BI313_17695 PF12794 Mechanosensitive ion channel inner membrane domain 1 BI313_17695 PF00924 Mechanosensitive ion channel BI313_17700 PF00884 Sulfatase BI313_17710 PF03109 ABC1 family BI313_17715 PF05661 Protein of unknown function (DUF808) BI313_17720 PF00990 Diguanylate cyclase, GGDEF domain BI313_17720 PF00072 Response regulator receiver domain BI313_17725 PF00534 Glycosyl transferases group 1 BI313_17725 PF08323 Starch synthase catalytic domain BI313_17730 PF02806 Alpha amylase, C-terminal all-beta domain BI313_17730 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI313_17730 PF00128 Alpha amylase, catalytic domain BI313_17735 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI313_17735 PF11941 Domain of unknown function (DUF3459) BI313_17735 PF00128 Alpha amylase, catalytic domain BI313_17740 PF02446 4-alpha-glucanotransferase BI313_17745 PF00128 Alpha amylase, catalytic domain BI313_17755 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BI313_17755 PF00128 Alpha amylase, catalytic domain BI313_17760 PF13460 NAD(P)H-binding BI313_17780 PF06903 VirK protein BI313_17785 PF02321 Outer membrane efflux protein BI313_17790 PF00440 Bacterial regulatory proteins, tetR family BI313_17800 PF00873 AcrB/AcrD/AcrF family BI313_17810 PF00106 short chain dehydrogenase BI313_17815 PF01638 HxlR-like helix-turn-helix BI313_17825 PF00271 Helicase conserved C-terminal domain BI313_17825 PF00270 DEAD/DEAH box helicase BI313_17840 PF00364 Biotin-requiring enzyme BI313_17840 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BI313_17840 PF02817 e3 binding domain BI313_17850 PF02780 Transketolase, C-terminal domain BI313_17850 PF02779 Transketolase, pyrimidine binding domain BI313_17855 PF00676 Dehydrogenase E1 component BI313_17865 PF03301 Tryptophan 2,3-dioxygenase BI313_17870 PF00854 POT family BI313_17880 PF01047 MarR family BI313_17885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BI313_17890 PF04480 Protein of unknown function (DUF559) BI313_17895 PF04209 homogentisate 1,2-dioxygenase BI313_17910 PF03334 Na+/H+ antiporter subunit BI313_17915 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BI313_17925 PF00361 Proton-conducting membrane transporter BI313_17930 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BI313_17935 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BI313_17935 PF00361 Proton-conducting membrane transporter BI313_17935 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BI313_17935 PF13244 Domain of unknown function (DUF4040) BI313_17950 PF07504 Fungalysin/Thermolysin Propeptide Motif BI313_17950 PF02868 Thermolysin metallopeptidase, alpha-helical domain BI313_17950 PF01447 Thermolysin metallopeptidase, catalytic domain BI313_17950 PF01483 Proprotein convertase P-domain BI313_17975 PF01259 SAICAR synthetase BI313_17980 PF00226 DnaJ domain BI313_17980 PF05099 Tellurite resistance protein TerB BI313_17995 PF00834 Ribulose-phosphate 3 epimerase family BI313_18000 PF00583 Acetyltransferase (GNAT) family BI313_18005 PF00781 Diacylglycerol kinase catalytic domain BI313_18010 PF04715 Anthranilate synthase component I, N terminal region BI313_18010 PF00425 chorismate binding enzyme BI313_18025 PF12008 Type I restriction and modification enzyme - subunit R C terminal BI313_18025 PF18766 SWI2/SNF2 ATPase BI313_18025 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BI313_18045 PF12161 HsdM N-terminal domain BI313_18045 PF02384 N-6 DNA Methylase BI313_18050 PF00117 Glutamine amidotransferase class-I BI313_18065 PF00591 Glycosyl transferase family, a/b domain BI313_18065 PF02885 Glycosyl transferase family, helical bundle domain BI313_18070 PF00218 Indole-3-glycerol phosphate synthase BI313_18080 PF00027 Cyclic nucleotide-binding domain BI313_18080 PF00325 Bacterial regulatory proteins, crp family BI313_18085 PF02675 S-adenosylmethionine decarboxylase BI313_18090 PF00893 Small Multidrug Resistance protein BI313_18095 PF03232 Ubiquinone biosynthesis protein COQ7 BI313_18100 PF00572 Ribosomal protein L13 BI313_18105 PF00380 Ribosomal protein S9/S16 BI313_18120 PF00293 NUDIX domain BI313_18130 PF00210 Ferritin-like domain BI313_18135 PF00512 His Kinase A (phospho-acceptor) domain BI313_18135 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BI313_18135 PF00672 HAMP domain BI313_18135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_18135 PF01627 Hpt domain BI313_18135 PF00072 Response regulator receiver domain BI313_18140 PF00486 Transcriptional regulatory protein, C terminal BI313_18140 PF00072 Response regulator receiver domain BI313_18160 PF01521 Iron-sulphur cluster biosynthesis BI313_18165 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain BI313_18165 PF00293 NUDIX domain BI313_18165 PF09297 NADH pyrophosphatase zinc ribbon domain BI313_18170 PF17113 Regulatory signalling modulator protein AmpE BI313_18170 PF03186 CobD/Cbib protein BI313_18195 PF07690 Major Facilitator Superfamily BI313_18200 PF12805 FUSC-like inner membrane protein yccS BI313_18205 PF02844 Phosphoribosylglycinamide synthetase, N domain BI313_18205 PF02843 Phosphoribosylglycinamide synthetase, C domain BI313_18205 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BI313_18215 PF01808 AICARFT/IMPCHase bienzyme BI313_18215 PF02142 MGS-like domain BI313_18220 PF01066 CDP-alcohol phosphatidyltransferase BI313_18225 PF12147 Putative methyltransferase BI313_18225 PF12146 Serine aminopeptidase, S33 BI313_18230 PF00782 Dual specificity phosphatase, catalytic domain BI313_18260 PF00818 Ice nucleation protein repeat BI313_18260 PF00818 Ice nucleation protein repeat BI313_18265 PF02954 Bacterial regulatory protein, Fis family BI313_18275 PF01381 Helix-turn-helix BI313_18300 PF00289 Biotin carboxylase, N-terminal domain BI313_18300 PF02785 Biotin carboxylase C-terminal domain BI313_18300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BI313_18310 PF00364 Biotin-requiring enzyme BI313_18315 PF01220 Dehydroquinase class II BI313_18320 PF02683 Cytochrome C biogenesis protein transmembrane region BI313_18320 PF11412 Disulphide bond corrector protein DsbC BI313_18325 PF03091 CutA1 divalent ion tolerance protein BI313_18330 PF04231 Endonuclease I BI313_18335 PF00166 Chaperonin 10 Kd subunit BI313_18340 PF00118 TCP-1/cpn60 chaperonin family BI313_18355 PF00593 TonB dependent receptor BI313_18355 PF07715 TonB-dependent Receptor Plug Domain BI313_18360 PF00793 DAHP synthetase I family BI313_18365 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BI313_18365 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BI313_18380 PF08450 SMP-30/Gluconolactonase/LRE-like region BI313_18390 PF03710 Glutamate-ammonia ligase adenylyltransferase BI313_18390 PF08335 GlnD PII-uridylyltransferase BI313_18405 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BI313_18435 PF00881 Nitroreductase family BI313_18440 PF04264 YceI-like domain BI313_18455 PF16957 Malonate decarboxylase, alpha subunit, transporter BI313_18460 PF06857 Malonate decarboxylase delta subunit (MdcD) BI313_18465 PF01039 Carboxyl transferase domain BI313_18475 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BI313_18480 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BI313_18485 PF02801 Beta-ketoacyl synthase, C-terminal domain BI313_18485 PF00698 Acyl transferase domain BI313_18485 PF00109 Beta-ketoacyl synthase, N-terminal domain BI313_18485 PF16197 Ketoacyl-synthetase C-terminal extension BI313_18485 PF08659 KR domain BI313_18485 PF00550 Phosphopantetheine attachment site BI313_18495 PF07729 FCD domain BI313_18495 PF00392 Bacterial regulatory proteins, gntR family BI313_18535 PF07745 Glycosyl hydrolase family 53 BI313_18540 PF17831 Pyruvate dehydrogenase E1 component middle domain BI313_18540 PF00456 Transketolase, thiamine diphosphate binding domain BI313_18555 PF01527 Transposase BI313_18560 PF13333 Integrase core domain BI313_18560 PF00665 Integrase core domain BI313_18560 PF13276 HTH-like domain BI313_18625 PF13409 Glutathione S-transferase, N-terminal domain BI313_18655 PF11838 ERAP1-like C-terminal domain BI313_18655 PF01433 Peptidase family M1 domain BI313_18670 PF12823 Domain of unknown function (DUF3817) BI313_18670 PF03176 MMPL family BI313_18685 PF07759 Protein of unknown function (DUF1615) BI313_18690 PF00990 Diguanylate cyclase, GGDEF domain BI313_18690 PF05230 MASE2 domain BI313_18695 PF02082 Transcriptional regulator BI313_18700 PF13192 Thioredoxin domain BI313_18700 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI313_18725 PF00892 EamA-like transporter family BI313_18745 PF00324 Amino acid permease BI313_18750 PF01544 CorA-like Mg2+ transporter protein BI313_18770 PF01204 Trehalase BI313_18780 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BI313_18780 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BI313_18805 PF02203 Tar ligand binding domain homologue BI313_18805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_18805 PF00672 HAMP domain BI313_18810 PF00553 Cellulose binding domain BI313_18810 PF00150 Cellulase (glycosyl hydrolase family 5) BI313_18815 PF00916 Sulfate permease family BI313_18815 PF01740 STAS domain BI313_18820 PF00990 Diguanylate cyclase, GGDEF domain BI313_18820 PF08448 PAS fold BI313_18850 PF13632 Glycosyl transferase family group 2 BI313_18860 PF07694 5TMR of 5TMR-LYT BI313_18860 PF06580 Histidine kinase BI313_18865 PF04397 LytTr DNA-binding domain BI313_18865 PF00072 Response regulator receiver domain BI313_18870 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BI313_18870 PF03900 Porphobilinogen deaminase, C-terminal domain BI313_18895 PF00326 Prolyl oligopeptidase family BI313_18895 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BI313_18910 PF00155 Aminotransferase class I and II BI313_18915 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BI313_18915 PF00326 Prolyl oligopeptidase family BI313_18920 PF04304 Protein of unknown function (DUF454) BI313_18930 PF01678 Diaminopimelate epimerase BI313_18940 PF02899 Phage integrase, N-terminal SAM-like domain BI313_18940 PF00589 Phage integrase family BI313_18950 PF00227 Proteasome subunit BI313_18955 PF10431 C-terminal, D2-small domain, of ClpB protein BI313_18955 PF00004 ATPase family associated with various cellular activities (AAA) BI313_18955 PF07724 AAA domain (Cdc48 subfamily) BI313_18970 PF13673 Acetyltransferase (GNAT) domain BI313_18975 PF13533 Biotin-lipoyl like BI313_18985 PF01209 ubiE/COQ5 methyltransferase family BI313_18990 PF00563 EAL domain BI313_18990 PF03707 Bacterial signalling protein N terminal repeat BI313_18990 PF00990 Diguanylate cyclase, GGDEF domain BI313_18995 PF01433 Peptidase family M1 domain BI313_18995 PF11838 ERAP1-like C-terminal domain BI313_19010 PF13360 PQQ-like domain BI313_19015 PF00497 Bacterial extracellular solute-binding proteins, family 3 BI313_19030 PF00107 Zinc-binding dehydrogenase BI313_19030 PF08240 Alcohol dehydrogenase GroES-like domain BI313_19040 PF01590 GAF domain BI313_19040 PF02954 Bacterial regulatory protein, Fis family BI313_19040 PF00158 Sigma-54 interaction domain BI313_19045 PF00294 pfkB family carbohydrate kinase BI313_19055 PF04085 rod shape-determining protein MreC BI313_19065 PF00905 Penicillin binding protein transpeptidase domain BI313_19065 PF03717 Penicillin-binding Protein dimerisation domain BI313_19070 PF01098 Cell cycle protein BI313_19075 PF00295 Glycosyl hydrolases family 28 BI313_19080 PF13406 Transglycosylase SLT domain BI313_19085 PF03330 Lytic transglycolase BI313_19085 PF05036 Sporulation related domain BI313_19090 PF00768 D-alanyl-D-alanine carboxypeptidase BI313_19090 PF07943 Penicillin-binding protein 5, C-terminal domain BI313_19105 PF04359 Protein of unknown function (DUF493) BI313_19110 PF03099 Biotin/lipoate A/B protein ligase family BI313_19115 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BI313_19115 PF04055 Radical SAM superfamily BI313_19120 PF17804 Tail specific protease N-terminal domain BI313_19120 PF11818 C-terminal domain of tail specific protease (DUF3340) BI313_19120 PF03572 Peptidase family S41 BI313_19120 PF00595 PDZ domain BI313_19130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_19130 PF03466 LysR substrate binding domain BI313_19140 PF01467 Cytidylyltransferase-like BI313_19140 PF00293 NUDIX domain BI313_19175 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BI313_19175 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BI313_19180 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BI313_19180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BI313_19185 PF04972 BON domain BI313_19190 PF00360 Phytochrome region BI313_19190 PF00512 His Kinase A (phospho-acceptor) domain BI313_19190 PF01590 GAF domain BI313_19190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_19190 PF08446 PAS fold BI313_19195 PF00072 Response regulator receiver domain BI313_19200 PF00512 His Kinase A (phospho-acceptor) domain BI313_19200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_19205 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BI313_19250 PF00263 Bacterial type II and III secretion system protein BI313_19250 PF03958 Bacterial type II/III secretion system short domain BI313_19255 PF00437 Type II/IV secretion system protein BI313_19260 PF00482 Type II secretion system (T2SS), protein F BI313_19265 PF07963 Prokaryotic N-terminal methylation motif BI313_19265 PF08334 Type II secretion system (T2SS), protein G BI313_19270 PF07963 Prokaryotic N-terminal methylation motif BI313_19270 PF12019 Type II transport protein GspH BI313_19275 PF07963 Prokaryotic N-terminal methylation motif BI313_19275 PF02501 Type II secretion system (T2SS), protein I BI313_19280 PF11612 Type II secretion system (T2SS), protein J BI313_19280 PF07963 Prokaryotic N-terminal methylation motif BI313_19285 PF03934 Type II secretion system (T2SS), protein K BI313_19310 PF07690 Major Facilitator Superfamily BI313_19315 PF00356 Bacterial regulatory proteins, lacI family BI313_19320 PF01380 SIS domain BI313_19325 PF01979 Amidohydrolase family BI313_19345 PF01966 HD domain BI313_19345 PF01743 Poly A polymerase head domain BI313_19345 PF12627 Probable RNA and SrmB- binding site of polymerase A BI313_19360 PF08264 Anticodon-binding domain of tRNA BI313_19360 PF10458 Valyl tRNA synthetase tRNA binding arm BI313_19360 PF00133 tRNA synthetases class I (I, L, M and V) BI313_19375 PF00883 Cytosol aminopeptidase family, catalytic domain BI313_19375 PF02789 Cytosol aminopeptidase family, N-terminal domain BI313_19385 PF03739 Lipopolysaccharide export system permease LptF/LptG BI313_19400 PF00589 Phage integrase family BI313_19400 PF02899 Phage integrase, N-terminal SAM-like domain BI313_19405 PF13098 Thioredoxin-like domain BI313_19405 PF10411 Disulfide bond isomerase protein N-terminus BI313_19410 PF02769 AIR synthase related protein, C-terminal domain BI313_19410 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BI313_19410 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BI313_19420 PF03895 YadA-like membrane anchor domain BI313_19420 PF13018 Extended Signal Peptide of Type V secretion system BI313_19420 PF05662 Coiled stalk of trimeric autotransporter adhesin BI313_19420 PF05658 Head domain of trimeric autotransporter adhesin BI313_19425 PF00082 Subtilase family BI313_19425 PF04151 Bacterial pre-peptidase C-terminal domain BI313_19430 PF00437 Type II/IV secretion system protein BI313_19430 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BI313_19435 PF00482 Type II secretion system (T2SS), protein F BI313_19440 PF08334 Type II secretion system (T2SS), protein G BI313_19445 PF12019 Type II transport protein GspH BI313_19450 PF07963 Prokaryotic N-terminal methylation motif BI313_19460 PF03934 Type II secretion system (T2SS), protein K BI313_19465 PF05137 Fimbrial assembly protein (PilN) BI313_19470 PF10741 Type II secretion system (T2SS), protein M subtype b BI313_19480 PF00263 Bacterial type II and III secretion system protein BI313_19480 PF03958 Bacterial type II/III secretion system short domain BI313_19500 PF07702 UTRA domain BI313_19500 PF00392 Bacterial regulatory proteins, gntR family BI313_19510 PF07715 TonB-dependent Receptor Plug Domain BI313_19510 PF00593 TonB dependent receptor BI313_19545 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BI313_19545 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BI313_19560 PF07238 PilZ domain BI313_19560 PF00535 Glycosyl transferase family 2 BI313_19560 PF03552 Cellulose synthase BI313_19565 PF03170 Bacterial cellulose synthase subunit BI313_19570 PF01270 Glycosyl hydrolases family 8 BI313_19575 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) BI313_19590 PF03960 ArsC family BI313_19595 PF01327 Polypeptide deformylase BI313_19600 PF12848 ABC transporter BI313_19600 PF00005 ABC transporter BI313_19610 PF00464 Serine hydroxymethyltransferase BI313_19615 PF03477 ATP cone domain BI313_19625 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BI313_19625 PF01872 RibD C-terminal domain BI313_19640 PF00677 Lumazine binding domain BI313_19645 PF00925 GTP cyclohydrolase II BI313_19645 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BI313_19650 PF00885 6,7-dimethyl-8-ribityllumazine synthase BI313_19655 PF01029 NusB family BI313_19660 PF00586 AIR synthase related protein, N-terminal domain BI313_19660 PF02769 AIR synthase related protein, C-terminal domain BI313_19685 PF03814 Potassium-transporting ATPase A subunit BI313_19695 PF02669 K+-transporting ATPase, c chain BI313_19700 PF00512 His Kinase A (phospho-acceptor) domain BI313_19700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_19700 PF13493 Domain of unknown function (DUF4118) BI313_19700 PF02702 Osmosensitive K+ channel His kinase sensor domain BI313_19700 PF13492 GAF domain BI313_19705 PF00486 Transcriptional regulatory protein, C terminal BI313_19705 PF00072 Response regulator receiver domain BI313_19710 PF07676 WD40-like Beta Propeller Repeat BI313_19710 PF00326 Prolyl oligopeptidase family BI313_19715 PF02913 FAD linked oxidases, C-terminal domain BI313_19715 PF01565 FAD binding domain BI313_19720 PF04307 LexA-binding, inner membrane-associated putative hydrolase BI313_19725 PF02021 Uncharacterised protein family UPF0102 BI313_19735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BI313_19760 PF02381 MraZ protein, putative antitoxin-like BI313_19765 PF01795 MraW methylase family BI313_19770 PF04999 Cell division protein FtsL BI313_19775 PF00905 Penicillin binding protein transpeptidase domain BI313_19775 PF03717 Penicillin-binding Protein dimerisation domain BI313_19780 PF01225 Mur ligase family, catalytic domain BI313_19780 PF08245 Mur ligase middle domain BI313_19780 PF02875 Mur ligase family, glutamate ligase domain BI313_19785 PF02875 Mur ligase family, glutamate ligase domain BI313_19785 PF08245 Mur ligase middle domain BI313_19785 PF01225 Mur ligase family, catalytic domain BI313_19790 PF00953 Glycosyl transferase family 4 BI313_19795 PF01098 Cell cycle protein BI313_19800 PF03033 Glycosyltransferase family 28 N-terminal domain BI313_19800 PF04101 Glycosyltransferase family 28 C-terminal domain BI313_19805 PF08245 Mur ligase middle domain BI313_19805 PF02875 Mur ligase family, glutamate ligase domain BI313_19805 PF01225 Mur ligase family, catalytic domain BI313_19810 PF07478 D-ala D-ala ligase C-terminus BI313_19810 PF01820 D-ala D-ala ligase N-terminus BI313_19815 PF03799 Cell division protein FtsQ BI313_19815 PF08478 POTRA domain, FtsQ-type BI313_19820 PF02491 SHS2 domain inserted in FTSA BI313_19825 PF12327 FtsZ family, C-terminal domain BI313_19825 PF00091 Tubulin/FtsZ family, GTPase domain BI313_19830 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BI313_19840 PF01551 Peptidase family M23 BI313_19840 PF08525 Opacity-associated protein A N-terminal motif BI313_19840 PF01476 LysM domain BI313_19845 PF07517 SecA DEAD-like domain BI313_19845 PF07516 SecA Wing and Scaffold domain BI313_19845 PF01043 SecA preprotein cross-linking domain BI313_19845 PF02810 SEC-C motif BI313_19860 PF00293 NUDIX domain BI313_19875 PF02219 Methylenetetrahydrofolate reductase BI313_19885 PF14765 Polyketide synthase dehydratase BI313_19885 PF00550 Phosphopantetheine attachment site BI313_19885 PF08659 KR domain BI313_19885 PF02801 Beta-ketoacyl synthase, C-terminal domain BI313_19885 PF00109 Beta-ketoacyl synthase, N-terminal domain BI313_19885 PF16197 Ketoacyl-synthetase C-terminal extension BI313_19885 PF00107 Zinc-binding dehydrogenase BI313_19885 PF08240 Alcohol dehydrogenase GroES-like domain BI313_19885 PF00698 Acyl transferase domain BI313_19900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BI313_19915 PF00128 Alpha amylase, catalytic domain BI313_19945 PF13649 Methyltransferase domain BI313_19950 PF05221 S-adenosyl-L-homocysteine hydrolase BI313_19950 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BI313_19960 PF00311 Phosphoenolpyruvate carboxylase BI313_19980 PF00691 OmpA family BI313_19980 PF00223 Photosystem I psaA/psaB protein BI313_20000 PF00438 S-adenosylmethionine synthetase, N-terminal domain BI313_20000 PF02773 S-adenosylmethionine synthetase, C-terminal domain BI313_20000 PF02772 S-adenosylmethionine synthetase, central domain BI313_20010 PF01207 Dihydrouridine synthase (Dus) BI313_20020 PF00294 pfkB family carbohydrate kinase BI313_20025 PF01773 Na+ dependent nucleoside transporter N-terminus BI313_20025 PF07670 Nucleoside recognition BI313_20025 PF07662 Na+ dependent nucleoside transporter C-terminus BI313_20030 PF00248 Aldo/keto reductase family BI313_20040 PF07715 TonB-dependent Receptor Plug Domain BI313_20040 PF00593 TonB dependent receptor BI313_20060 PF00528 Binding-protein-dependent transport system inner membrane component BI313_20065 PF00005 ABC transporter BI313_20075 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BI313_20085 PF00005 ABC transporter BI313_20090 PF13472 GDSL-like Lipase/Acylhydrolase family BI313_20095 PF00072 Response regulator receiver domain BI313_20095 PF00486 Transcriptional regulatory protein, C terminal BI313_20100 PF00512 His Kinase A (phospho-acceptor) domain BI313_20100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_20100 PF08521 Two-component sensor kinase N-terminal BI313_20110 PF01219 Prokaryotic diacylglycerol kinase BI313_20120 PF04536 TPM domain BI313_20130 PF01790 Prolipoprotein diacylglyceryl transferase BI313_20135 PF00303 Thymidylate synthase BI313_20145 PF00186 Dihydrofolate reductase BI313_20150 PF00149 Calcineurin-like phosphoesterase BI313_20155 PF04379 ApaG domain BI313_20160 PF00398 Ribosomal RNA adenine dimethylase BI313_20165 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BI313_20170 PF09312 SurA N-terminal domain BI313_20170 PF00639 PPIC-type PPIASE domain BI313_20175 PF03968 OstA-like protein BI313_20175 PF04453 LPS transport system D BI313_20180 PF00850 Histone deacetylase domain BI313_20185 PF01923 Cobalamin adenosyltransferase BI313_20195 PF01494 FAD binding domain BI313_20200 PF01494 FAD binding domain BI313_20220 PF07729 FCD domain BI313_20220 PF00392 Bacterial regulatory proteins, gntR family BI313_20225 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BI313_20230 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BI313_20230 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit BI313_20235 PF03466 LysR substrate binding domain BI313_20235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_20240 PF13193 AMP-binding enzyme C-terminal domain BI313_20240 PF00501 AMP-binding enzyme BI313_20245 PF00171 Aldehyde dehydrogenase family BI313_20250 PF00378 Enoyl-CoA hydratase/isomerase BI313_20275 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BI313_20275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BI313_20280 PF18125 RlmM ferredoxin-like domain BI313_20280 PF01728 FtsJ-like methyltransferase BI313_20300 PF00892 EamA-like transporter family BI313_20305 PF00749 tRNA synthetases class I (E and Q), catalytic domain BI313_20305 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BI313_20320 PF00990 Diguanylate cyclase, GGDEF domain BI313_20320 PF00072 Response regulator receiver domain BI313_20325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_20325 PF00512 His Kinase A (phospho-acceptor) domain BI313_20325 PF01627 Hpt domain BI313_20325 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BI313_20325 PF00672 HAMP domain BI313_20325 PF00072 Response regulator receiver domain BI313_20330 PF00072 Response regulator receiver domain BI313_20330 PF00196 Bacterial regulatory proteins, luxR family BI313_20340 PF01625 Peptide methionine sulfoxide reductase BI313_20350 PF00923 Transaldolase/Fructose-6-phosphate aldolase BI313_20355 PF14760 Rnk N-terminus BI313_20355 PF01272 Transcription elongation factor, GreA/GreB, C-term BI313_20360 PF03466 LysR substrate binding domain BI313_20360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_20365 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI313_20365 PF13192 Thioredoxin domain BI313_20370 PF10417 C-terminal domain of 1-Cys peroxiredoxin BI313_20370 PF00578 AhpC/TSA family BI313_20375 PF17827 PrmC N-terminal domain BI313_20375 PF05175 Methyltransferase small domain BI313_20380 PF00561 alpha/beta hydrolase fold BI313_20390 PF00293 NUDIX domain BI313_20395 PF01367 5'-3' exonuclease, C-terminal SAM fold BI313_20395 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BI313_20395 PF01612 3'-5' exonuclease BI313_20395 PF00476 DNA polymerase family A BI313_20400 PF00881 Nitroreductase family BI313_20430 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BI313_20430 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BI313_20430 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BI313_20450 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BI313_20455 PF02233 NAD(P) transhydrogenase beta subunit BI313_20475 PF01063 Amino-transferase class IV BI313_20485 PF00082 Subtilase family BI313_20485 PF04151 Bacterial pre-peptidase C-terminal domain BI313_20490 PF00082 Subtilase family BI313_20490 PF04151 Bacterial pre-peptidase C-terminal domain BI313_20495 PF04073 Aminoacyl-tRNA editing domain BI313_20510 PF03358 NADPH-dependent FMN reductase BI313_20515 PF03631 Virulence factor BrkB BI313_20520 PF08534 Redoxin BI313_20525 PF00708 Acylphosphatase BI313_20535 PF03976 Polyphosphate kinase 2 (PPK2) BI313_20540 PF00994 Probable molybdopterin binding domain BI313_20550 PF00472 RF-1 domain BI313_20550 PF03462 PCRF domain BI313_20555 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BI313_20555 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BI313_20555 PF01488 Shikimate / quinate 5-dehydrogenase BI313_20565 PF03550 Outer membrane lipoprotein LolB BI313_20570 PF00288 GHMP kinases N terminal domain BI313_20570 PF08544 GHMP kinases C terminal BI313_20580 PF14572 Phosphoribosyl synthetase-associated domain BI313_20580 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BI313_20585 PF14693 Ribosomal protein TL5, C-terminal domain BI313_20585 PF01386 Ribosomal L25p family BI313_20590 PF01195 Peptidyl-tRNA hydrolase BI313_20595 PF06071 Protein of unknown function (DUF933) BI313_20595 PF01926 50S ribosome-binding GTPase BI313_20600 PF00589 Phage integrase family BI313_20600 PF13356 Arm DNA-binding domain BI313_20620 PF01555 DNA methylase BI313_20655 PF03143 Elongation factor Tu C-terminal domain BI313_20655 PF03144 Elongation factor Tu domain 2 BI313_20655 PF00009 Elongation factor Tu GTP binding domain BI313_20665 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BI313_20670 PF00467 KOW motif BI313_20670 PF02357 Transcription termination factor nusG BI313_20675 PF00298 Ribosomal protein L11, RNA binding domain BI313_20675 PF03946 Ribosomal protein L11, N-terminal domain BI313_20680 PF00687 Ribosomal protein L1p/L10e family BI313_20685 PF00466 Ribosomal protein L10 BI313_20690 PF16320 Ribosomal protein L7/L12 dimerisation domain BI313_20690 PF00542 Ribosomal protein L7/L12 C-terminal domain BI313_20695 PF04563 RNA polymerase beta subunit BI313_20695 PF04561 RNA polymerase Rpb2, domain 2 BI313_20695 PF04565 RNA polymerase Rpb2, domain 3 BI313_20695 PF10385 RNA polymerase beta subunit external 1 domain BI313_20695 PF00562 RNA polymerase Rpb2, domain 6 BI313_20695 PF04560 RNA polymerase Rpb2, domain 7 BI313_20700 PF05000 RNA polymerase Rpb1, domain 4 BI313_20700 PF04997 RNA polymerase Rpb1, domain 1 BI313_20700 PF00623 RNA polymerase Rpb1, domain 2 BI313_20700 PF04983 RNA polymerase Rpb1, domain 3 BI313_20700 PF04998 RNA polymerase Rpb1, domain 5 BI313_20705 PF00164 Ribosomal protein S12/S23 BI313_20710 PF00177 Ribosomal protein S7p/S5e BI313_20715 PF14492 Elongation Factor G, domain II BI313_20715 PF00679 Elongation factor G C-terminus BI313_20715 PF00009 Elongation factor Tu GTP binding domain BI313_20715 PF03144 Elongation factor Tu domain 2 BI313_20715 PF03764 Elongation factor G, domain IV BI313_20720 PF03143 Elongation factor Tu C-terminal domain BI313_20720 PF00009 Elongation factor Tu GTP binding domain BI313_20720 PF03144 Elongation factor Tu domain 2 BI313_20725 PF00338 Ribosomal protein S10p/S20e BI313_20730 PF00297 Ribosomal protein L3 BI313_20735 PF00573 Ribosomal protein L4/L1 family BI313_20740 PF00276 Ribosomal protein L23 BI313_20745 PF03947 Ribosomal Proteins L2, C-terminal domain BI313_20745 PF00181 Ribosomal Proteins L2, RNA binding domain BI313_20750 PF00203 Ribosomal protein S19 BI313_20755 PF00237 Ribosomal protein L22p/L17e BI313_20760 PF00189 Ribosomal protein S3, C-terminal domain BI313_20760 PF07650 KH domain BI313_20765 PF00252 Ribosomal protein L16p/L10e BI313_20770 PF00831 Ribosomal L29 protein BI313_20775 PF00366 Ribosomal protein S17 BI313_20780 PF00238 Ribosomal protein L14p/L23e BI313_20785 PF00467 KOW motif BI313_20785 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BI313_20790 PF00673 ribosomal L5P family C-terminus BI313_20790 PF00281 Ribosomal protein L5 BI313_20795 PF00253 Ribosomal protein S14p/S29e BI313_20800 PF00410 Ribosomal protein S8 BI313_20805 PF00347 Ribosomal protein L6 BI313_20810 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BI313_20815 PF03719 Ribosomal protein S5, C-terminal domain BI313_20815 PF00333 Ribosomal protein S5, N-terminal domain BI313_20820 PF00327 Ribosomal protein L30p/L7e BI313_20825 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BI313_20830 PF00344 SecY translocase BI313_20835 PF00416 Ribosomal protein S13/S18 BI313_20840 PF00411 Ribosomal protein S11 BI313_20845 PF01479 S4 domain BI313_20845 PF00163 Ribosomal protein S4/S9 N-terminal domain BI313_20850 PF01000 RNA polymerase Rpb3/RpoA insert domain BI313_20850 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BI313_20850 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BI313_20855 PF01196 Ribosomal protein L17 BI313_20860 PF02600 Disulfide bond formation protein DsbB BI313_20870 PF01474 Class-II DAHP synthetase family BI313_20880 PF01425 Amidase BI313_20895 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BI313_20900 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BI313_20900 PF00056 lactate/malate dehydrogenase, NAD binding domain BI313_20905 PF02798 Glutathione S-transferase, N-terminal domain BI313_20905 PF00043 Glutathione S-transferase, C-terminal domain BI313_20920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BI313_20920 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI313_20925 PF00107 Zinc-binding dehydrogenase BI313_20925 PF08240 Alcohol dehydrogenase GroES-like domain BI313_20935 PF00223 Photosystem I psaA/psaB protein BI313_20935 PF00691 OmpA family BI313_20945 PF00849 RNA pseudouridylate synthase BI313_20955 PF00155 Aminotransferase class I and II BI313_20965 PF00528 Binding-protein-dependent transport system inner membrane component BI313_20970 PF00528 Binding-protein-dependent transport system inner membrane component BI313_20975 PF17850 CysA C-terminal regulatory domain BI313_20975 PF12857 TOBE-like domain BI313_20975 PF00005 ABC transporter BI313_20985 PF00107 Zinc-binding dehydrogenase BI313_20985 PF08240 Alcohol dehydrogenase GroES-like domain BI313_20995 PF04185 Phosphoesterase family BI313_20995 PF05506 Domain of unknown function (DUF756) BI313_21000 PF10459 Peptidase S46 BI313_21005 PF00300 Histidine phosphatase superfamily (branch 1) BI313_21015 PF02875 Mur ligase family, glutamate ligase domain BI313_21015 PF08245 Mur ligase middle domain BI313_21030 PF00156 Phosphoribosyl transferase domain BI313_21035 PF04305 Protein of unknown function (DUF455) BI313_21050 PF00149 Calcineurin-like phosphoesterase BI313_21055 PF01569 PAP2 superfamily BI313_21060 PF00534 Glycosyl transferases group 1 BI313_21060 PF13439 Glycosyltransferase Family 4 BI313_21065 PF02541 Ppx/GppA phosphatase family BI313_21070 PF13090 Polyphosphate kinase C-terminal domain 2 BI313_21070 PF17941 Polyphosphate kinase C-terminal domain 1 BI313_21070 PF13089 Polyphosphate kinase N-terminal domain BI313_21070 PF02503 Polyphosphate kinase middle domain BI313_21075 PF00989 PAS fold BI313_21075 PF11808 Phosphate regulon sensor protein PhoR BI313_21075 PF00512 His Kinase A (phospho-acceptor) domain BI313_21075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_21080 PF00486 Transcriptional regulatory protein, C terminal BI313_21080 PF00072 Response regulator receiver domain BI313_21085 PF13181 Tetratricopeptide repeat BI313_21085 PF01435 Peptidase family M48 BI313_21090 PF00462 Glutaredoxin BI313_21100 PF00180 Isocitrate/isopropylmalate dehydrogenase BI313_21135 PF00512 His Kinase A (phospho-acceptor) domain BI313_21135 PF00989 PAS fold BI313_21135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_21145 PF05697 Bacterial trigger factor protein (TF) BI313_21145 PF05698 Bacterial trigger factor protein (TF) C-terminus BI313_21150 PF00574 Clp protease BI313_21155 PF06689 ClpX C4-type zinc finger BI313_21155 PF10431 C-terminal, D2-small domain, of ClpB protein BI313_21155 PF07724 AAA domain (Cdc48 subfamily) BI313_21160 PF00004 ATPase family associated with various cellular activities (AAA) BI313_21160 PF02190 ATP-dependent protease La (LON) substrate-binding domain BI313_21160 PF05362 Lon protease (S16) C-terminal proteolytic domain BI313_21165 PF00216 Bacterial DNA-binding protein BI313_21195 PF00753 Metallo-beta-lactamase superfamily BI313_21195 PF16123 Hydroxyacylglutathione hydrolase C-terminus BI313_21205 PF00075 RNase H BI313_21210 PF00929 Exonuclease BI313_21230 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BI313_21240 PF12706 Beta-lactamase superfamily domain BI313_21240 PF00753 Metallo-beta-lactamase superfamily BI313_21245 PF06463 Molybdenum Cofactor Synthesis C BI313_21245 PF04055 Radical SAM superfamily BI313_21250 PF01967 MoaC family BI313_21255 PF02597 ThiS family BI313_21260 PF02391 MoaE protein BI313_21275 PF12169 DNA polymerase III subunits gamma and tau domain III BI313_21275 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BI313_21275 PF12170 DNA polymerase III tau subunit V interacting with alpha BI313_21280 PF02575 YbaB/EbfC DNA-binding family BI313_21285 PF13662 Toprim domain BI313_21285 PF02132 RecR protein BI313_21290 PF01230 HIT domain BI313_21300 PF01841 Transglutaminase-like superfamily BI313_21300 PF11992 Domain of unknown function (DUF3488) BI313_21300 PF13559 Domain of unknown function (DUF4129) BI313_21310 PF07726 ATPase family associated with various cellular activities (AAA) BI313_21310 PF17863 AAA lid domain BI313_21330 PF02545 Maf-like protein BI313_21335 PF02620 Large ribosomal RNA subunit accumulation protein YceD BI313_21340 PF01783 Ribosomal L32p protein family BI313_21345 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BI313_21345 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BI313_21350 PF00698 Acyl transferase domain BI313_21360 PF00550 Phosphopantetheine attachment site BI313_21365 PF00109 Beta-ketoacyl synthase, N-terminal domain BI313_21365 PF02801 Beta-ketoacyl synthase, C-terminal domain BI313_21370 PF00425 chorismate binding enzyme BI313_21370 PF04715 Anthranilate synthase component I, N terminal region BI313_21375 PF02618 YceG-like family BI313_21380 PF09115 DNA polymerase III, delta subunit, C terminal BI313_21400 PF00158 Sigma-54 interaction domain BI313_21400 PF02954 Bacterial regulatory protein, Fis family BI313_21400 PF06506 Propionate catabolism activator BI313_21410 PF00285 Citrate synthase, C-terminal domain BI313_21415 PF00330 Aconitase family (aconitate hydratase) BI313_21415 PF00694 Aconitase C-terminal domain BI313_21425 PF04303 PrpF protein BI313_21430 PF07715 TonB-dependent Receptor Plug Domain BI313_21430 PF00593 TonB dependent receptor BI313_21445 PF07703 Alpha-2-macroglobulin bait region domain BI313_21445 PF00207 Alpha-2-macroglobulin family BI313_21445 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain BI313_21445 PF11974 Bacterial alpha-2-macroglobulin MG3 domain BI313_21445 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain BI313_21445 PF01835 MG2 domain BI313_21445 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain BI313_21445 PF17962 Bacterial macroglobulin domain 6 BI313_21470 PF00905 Penicillin binding protein transpeptidase domain BI313_21470 PF00912 Transglycosylase BI313_21470 PF06832 Penicillin-Binding Protein C-terminus Family BI313_21480 PF08534 Redoxin BI313_21490 PF00226 DnaJ domain BI313_21490 PF01556 DnaJ C terminal domain BI313_21495 PF00072 Response regulator receiver domain BI313_21500 PF12221 Bacterial membrane protein N terminal BI313_21500 PF01145 SPFH domain / Band 7 family BI313_21505 PF01145 SPFH domain / Band 7 family BI313_21510 PF00709 Adenylosuccinate synthetase BI313_21515 PF01433 Peptidase family M1 domain BI313_21555 PF12161 HsdM N-terminal domain BI313_21555 PF02384 N-6 DNA Methylase BI313_21585 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BI313_21585 PF18766 SWI2/SNF2 ATPase BI313_21585 PF11867 Domain of unknown function (DUF3387) BI313_21615 PF13977 BetI-type transcriptional repressor, C-terminal BI313_21615 PF00440 Bacterial regulatory proteins, tetR family BI313_21620 PF00300 Histidine phosphatase superfamily (branch 1) BI313_21620 PF13456 Reverse transcriptase-like BI313_21625 PF01256 Carbohydrate kinase BI313_21635 PF00723 Glycosyl hydrolases family 15 BI313_21650 PF17678 Glycosyl hydrolase family 92 N-terminal domain BI313_21650 PF07971 Glycosyl hydrolase family 92 BI313_21660 PF07992 Pyridine nucleotide-disulphide oxidoreductase BI313_21695 PF17755 UvrA DNA-binding domain BI313_21705 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI313_21705 PF00933 Glycosyl hydrolase family 3 N terminal domain BI313_21705 PF14310 Fibronectin type III-like domain BI313_21710 PF00107 Zinc-binding dehydrogenase BI313_21710 PF08240 Alcohol dehydrogenase GroES-like domain BI313_21720 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BI313_21720 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BI313_21725 PF00941 FAD binding domain in molybdopterin dehydrogenase BI313_21725 PF03450 CO dehydrogenase flavoprotein C-terminal domain BI313_21730 PF01799 [2Fe-2S] binding domain BI313_21730 PF00111 2Fe-2S iron-sulfur cluster binding domain BI313_21755 PF01726 LexA DNA binding domain BI313_21755 PF00717 Peptidase S24-like BI313_21775 PF02811 PHP domain BI313_21775 PF07733 Bacterial DNA polymerase III alpha NTPase domain BI313_21775 PF14579 Helix-hairpin-helix motif BI313_21775 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BI313_21790 PF03169 OPT oligopeptide transporter protein BI313_21800 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BI313_21800 PF00326 Prolyl oligopeptidase family BI313_21800 PF07676 WD40-like Beta Propeller Repeat BI313_21815 PF12833 Helix-turn-helix domain BI313_21815 PF02311 AraC-like ligand binding domain BI313_21825 PF06628 Catalase-related immune-responsive BI313_21825 PF18011 C-terminal domain found in long catalases BI313_21825 PF00199 Catalase BI313_21830 PF00248 Aldo/keto reductase family BI313_21835 PF00135 Carboxylesterase family BI313_21840 PF02347 Glycine cleavage system P-protein BI313_21845 PF07690 Major Facilitator Superfamily BI313_21865 PF08019 Phosphoethanolamine transferase EptA/EptB BI313_21865 PF00884 Sulfatase BI313_21880 PF00486 Transcriptional regulatory protein, C terminal BI313_21880 PF00072 Response regulator receiver domain BI313_21885 PF00512 His Kinase A (phospho-acceptor) domain BI313_21885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_21895 PF03776 Septum formation topological specificity factor MinE BI313_21900 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BI313_21905 PF05209 Septum formation inhibitor MinC, N-terminal domain BI313_21905 PF03775 Septum formation inhibitor MinC, C-terminal domain BI313_21915 PF07730 Histidine kinase BI313_21920 PF00196 Bacterial regulatory proteins, luxR family BI313_21920 PF00072 Response regulator receiver domain BI313_21935 PF00730 HhH-GPD superfamily base excision DNA repair protein BI313_21965 PF02222 ATP-grasp domain BI313_21985 PF04377 Arginine-tRNA-protein transferase, C terminus BI313_21985 PF04376 Arginine-tRNA-protein transferase, N terminus BI313_22010 PF00378 Enoyl-CoA hydratase/isomerase BI313_22020 PF00005 ABC transporter BI313_22020 PF17755 UvrA DNA-binding domain BI313_22020 PF17760 UvrA interaction domain BI313_22025 PF00829 Ribosomal prokaryotic L21 protein BI313_22030 PF01016 Ribosomal L27 protein BI313_22035 PF01926 50S ribosome-binding GTPase BI313_22035 PF01018 GTP1/OBG BI313_22040 PF01649 Ribosomal protein S20 BI313_22045 PF03023 Lipid II flippase MurJ BI313_22050 PF01687 Riboflavin kinase BI313_22050 PF06574 FAD synthetase BI313_22055 PF08264 Anticodon-binding domain of tRNA BI313_22055 PF00133 tRNA synthetases class I (I, L, M and V) BI313_22055 PF06827 Zinc finger found in FPG and IleRS BI313_22060 PF01252 Signal peptidase (SPase) II BI313_22065 PF02401 LytB protein BI313_22075 PF06481 COX Aromatic Rich Motif BI313_22075 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BI313_22080 PF00115 Cytochrome C and Quinol oxidase polypeptide I BI313_22085 PF00510 Cytochrome c oxidase subunit III BI313_22090 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BI313_22100 PF18073 Rubredoxin metal binding domain BI313_22105 PF05656 Protein of unknown function (DUF805) BI313_22115 PF12833 Helix-turn-helix domain BI313_22120 PF00183 Hsp90 protein BI313_22120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_22130 PF01740 STAS domain BI313_22130 PF08678 Rsbr N terminal BI313_22135 PF01740 STAS domain BI313_22140 PF13581 Histidine kinase-like ATPase domain BI313_22150 PF17149 Periplasmic sensor domain found in signal transduction proteins BI313_22150 PF00512 His Kinase A (phospho-acceptor) domain BI313_22150 PF00072 Response regulator receiver domain BI313_22150 PF01627 Hpt domain BI313_22150 PF00672 HAMP domain BI313_22150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_22155 PF13188 PAS domain BI313_22155 PF00512 His Kinase A (phospho-acceptor) domain BI313_22155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_22155 PF08448 PAS fold BI313_22155 PF00072 Response regulator receiver domain BI313_22165 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BI313_22165 PF04616 Glycosyl hydrolases family 43 BI313_22170 PF07715 TonB-dependent Receptor Plug Domain BI313_22170 PF00593 TonB dependent receptor BI313_22175 PF00085 Thioredoxin BI313_22180 PF07237 Protein of unknown function (DUF1428) BI313_22185 PF00990 Diguanylate cyclase, GGDEF domain BI313_22185 PF00072 Response regulator receiver domain BI313_22190 PF01339 CheB methylesterase BI313_22195 PF03705 CheR methyltransferase, all-alpha domain BI313_22195 PF01739 CheR methyltransferase, SAM binding domain BI313_22200 PF00672 HAMP domain BI313_22200 PF00512 His Kinase A (phospho-acceptor) domain BI313_22200 PF01627 Hpt domain BI313_22200 PF00072 Response regulator receiver domain BI313_22200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_22200 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BI313_22205 PF00072 Response regulator receiver domain BI313_22205 PF13426 PAS domain BI313_22205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BI313_22210 PF00072 Response regulator receiver domain BI313_22215 PF00722 Glycosyl hydrolases family 16 BI313_22225 PF03466 LysR substrate binding domain BI313_22225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_22230 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BI313_22235 PF01263 Aldose 1-epimerase BI313_22240 PF01578 Cytochrome C assembly protein BI313_22245 PF00448 SRP54-type protein, GTPase domain BI313_22245 PF02881 SRP54-type protein, helical bundle domain BI313_22245 PF02978 Signal peptide binding domain BI313_22250 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) BI313_22255 PF03060 Nitronate monooxygenase BI313_22265 PF00886 Ribosomal protein S16 BI313_22270 PF01782 RimM N-terminal domain BI313_22270 PF05239 PRC-barrel domain BI313_22275 PF01746 tRNA (Guanine-1)-methyltransferase BI313_22280 PF01245 Ribosomal protein L19 BI313_22285 PF01554 MatE BI313_22290 PF01479 S4 domain BI313_22295 PF00141 Peroxidase BI313_22305 PF01624 MutS domain I BI313_22305 PF05188 MutS domain II BI313_22305 PF05192 MutS domain III BI313_22305 PF05190 MutS family domain IV BI313_22305 PF00488 MutS domain V BI313_22310 PF02743 Cache domain BI313_22310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BI313_22310 PF00672 HAMP domain BI313_22330 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BI313_22330 PF00703 Glycosyl hydrolases family 2 BI313_22330 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BI313_22330 PF16355 Domain of unknown function (DUF4982) BI313_22330 PF02837 Glycosyl hydrolases family 2, sugar binding domain BI313_22335 PF07745 Glycosyl hydrolase family 53 BI313_22345 PF09856 Predicted transcriptional regulator (DUF2083) BI313_22345 PF06114 IrrE N-terminal-like domain BI313_22345 PF01381 Helix-turn-helix BI313_22350 PF00171 Aldehyde dehydrogenase family BI313_22355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI313_22355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI313_22355 PF02770 Acyl-CoA dehydrogenase, middle domain BI313_22360 PF00378 Enoyl-CoA hydratase/isomerase BI313_22365 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BI313_22365 PF00378 Enoyl-CoA hydratase/isomerase BI313_22365 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BI313_22370 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BI313_22370 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BI313_22375 PF01545 Cation efflux family BI313_22385 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BI313_22385 PF00378 Enoyl-CoA hydratase/isomerase BI313_22385 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BI313_22390 PF04542 Sigma-70 region 2 BI313_22390 PF08281 Sigma-70, region 4 BI313_22400 PF13180 PDZ domain BI313_22405 PF06421 GTP-binding protein LepA C-terminus BI313_22405 PF03144 Elongation factor Tu domain 2 BI313_22405 PF00009 Elongation factor Tu GTP binding domain BI313_22405 PF00679 Elongation factor G C-terminus BI313_22410 PF10502 Signal peptidase, peptidase S26 BI313_22420 PF14622 Ribonuclease-III-like BI313_22420 PF00035 Double-stranded RNA binding motif BI313_22425 PF07650 KH domain BI313_22425 PF01926 50S ribosome-binding GTPase BI313_22435 PF11967 Recombination protein O N terminal BI313_22435 PF02565 Recombination protein O C terminal BI313_22445 PF05958 tRNA (Uracil-5-)-methyltransferase BI313_22460 PF01323 DSBA-like thioredoxin domain BI313_22465 PF01266 FAD dependent oxidoreductase BI313_22465 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BI313_22470 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BI313_22475 PF00933 Glycosyl hydrolase family 3 N terminal domain BI313_22485 PF01048 Phosphorylase superfamily BI313_22490 PF00313 'Cold-shock' DNA-binding domain BI313_22495 PF01494 FAD binding domain BI313_22505 PF00270 DEAD/DEAH box helicase BI313_22505 PF08494 DEAD/H associated BI313_22505 PF00271 Helicase conserved C-terminal domain BI313_22510 PF01068 ATP dependent DNA ligase domain BI313_22510 PF04679 ATP dependent DNA ligase C terminal region BI313_22510 PF04675 DNA ligase N terminus BI313_22520 PF01068 ATP dependent DNA ligase domain BI313_22520 PF04679 ATP dependent DNA ligase C terminal region BI313_22520 PF04675 DNA ligase N terminus BI313_22535 PF00990 Diguanylate cyclase, GGDEF domain BI313_22550 PF02803 Thiolase, C-terminal domain BI313_22550 PF00108 Thiolase, N-terminal domain BI313_22555 PF12951 Passenger-associated-transport-repeat BI313_22555 PF00082 Subtilase family BI313_22555 PF03797 Autotransporter beta-domain BI313_22560 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BI313_22560 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BI313_22570 PF01863 Protein of unknown function DUF45 BI313_22575 PF07043 Protein of unknown function (DUF1328) BI313_22585 PF01258 Prokaryotic dksA/traR C4-type zinc finger BI313_22625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BI313_22635 PF08274 PhnA Zinc-Ribbon BI313_22635 PF03831 PhnA domain BI313_22650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BI313_22655 PF07690 Major Facilitator Superfamily BI313_22690 PF09924 Uncharacterised conserved protein (DUF2156) BI313_22690 PF03706 Lysylphosphatidylglycerol synthase TM region BI313_22700 PF01042 Endoribonuclease L-PSP BI313_22745 PF04545 Sigma-70, region 4 BI313_22745 PF04542 Sigma-70 region 2 BI313_22760 PF04060 Putative Fe-S cluster BI313_22770 PF09334 tRNA synthetases class I (M) BI313_22770 PF01588 Putative tRNA binding domain BI313_22790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BI313_22795 PF00324 Amino acid permease BI313_22800 PF02574 Homocysteine S-methyltransferase BI313_22815 PF02592 Putative vitamin uptake transporter BI313_22840 PF03551 Transcriptional regulator PadR-like family BI313_22870 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BI313_22875 PF07733 Bacterial DNA polymerase III alpha NTPase domain BI313_22875 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BI313_22875 PF14579 Helix-hairpin-helix motif BI313_22875 PF02811 PHP domain BI313_22875 PF01336 OB-fold nucleic acid binding domain BI313_22880 PF01351 Ribonuclease HII BI313_22885 PF02684 Lipid-A-disaccharide synthetase BI313_22890 PF00132 Bacterial transferase hexapeptide (six repeats) BI313_22890 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BI313_22895 PF07977 FabA-like domain BI313_22900 PF00132 Bacterial transferase hexapeptide (six repeats) BI313_22900 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BI313_22910 PF07244 Surface antigen variable number repeat BI313_22910 PF01103 Surface antigen BI313_22915 PF02163 Peptidase family M50 BI313_22915 PF17820 PDZ domain BI313_22920 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BI313_22920 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BI313_22920 PF13288 DXP reductoisomerase C-terminal domain BI313_22930 PF01255 Putative undecaprenyl diphosphate synthase BI313_22935 PF01765 Ribosome recycling factor BI313_22940 PF00696 Amino acid kinase family BI313_22945 PF00072 Response regulator receiver domain BI313_22945 PF00990 Diguanylate cyclase, GGDEF domain BI313_22950 PF00889 Elongation factor TS BI313_22955 PF00318 Ribosomal protein S2 BI313_22990 PF00557 Metallopeptidase family M24 BI313_22995 PF01909 Nucleotidyltransferase domain BI313_22995 PF08335 GlnD PII-uridylyltransferase BI313_22995 PF01966 HD domain BI313_23000 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BI313_23000 PF14602 Hexapeptide repeat of succinyl-transferase BI313_23000 PF00132 Bacterial transferase hexapeptide (six repeats) BI313_23010 PF03960 ArsC family BI313_23015 PF07687 Peptidase dimerisation domain BI313_23015 PF01546 Peptidase family M20/M25/M40 BI313_23020 PF00733 Asparagine synthase BI313_23020 PF13537 Glutamine amidotransferase domain BI313_23030 PF00593 TonB dependent receptor BI313_23030 PF07715 TonB-dependent Receptor Plug Domain BI313_23035 PF01804 Penicillin amidase BI313_23040 PF00210 Ferritin-like domain BI313_23045 PF05724 Thiopurine S-methyltransferase (TPMT) BI313_23055 PF00521 DNA gyrase/topoisomerase IV, subunit A BI313_23055 PF03989 DNA gyrase C-terminal domain, beta-propeller BI313_23070 PF02321 Outer membrane efflux protein BI313_23075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI313_23075 PF00529 HlyD membrane-fusion protein of T1SS BI313_23080 PF07690 Major Facilitator Superfamily BI313_23095 PF01915 Glycosyl hydrolase family 3 C-terminal domain BI313_23095 PF14310 Fibronectin type III-like domain BI313_23095 PF00933 Glycosyl hydrolase family 3 N terminal domain BI313_23105 PF00854 POT family BI313_23130 PF12802 MarR family BI313_23135 PF01432 Peptidase family M3 BI313_23140 PF00255 Glutathione peroxidase BI313_23145 PF00970 Oxidoreductase FAD-binding domain BI313_23145 PF00175 Oxidoreductase NAD-binding domain BI313_23150 PF00005 ABC transporter BI313_23165 PF05681 Fumarate hydratase (Fumerase) BI313_23165 PF05683 Fumarase C-terminus BI313_23180 PF00484 Carbonic anhydrase BI313_23185 PF02253 Phospholipase A1 BI313_23195 PF00313 'Cold-shock' DNA-binding domain BI313_23210 PF00899 ThiF family BI313_23215 PF01026 TatD related DNase BI313_23230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BI313_23230 PF02770 Acyl-CoA dehydrogenase, middle domain BI313_23230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BI313_23240 PF00043 Glutathione S-transferase, C-terminal domain BI313_23240 PF02798 Glutathione S-transferase, N-terminal domain BI313_23245 PF00733 Asparagine synthase BI313_23245 PF13537 Glutamine amidotransferase domain BI313_23250 PF03358 NADPH-dependent FMN reductase BI313_23255 PF00772 DnaB-like helicase N terminal domain BI313_23255 PF03796 DnaB-like helicase C terminal domain BI313_23260 PF03441 FAD binding domain of DNA photolyase BI313_23260 PF00875 DNA photolyase BI313_23270 PF00691 OmpA family BI313_23270 PF05736 OprF membrane domain BI313_23275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_23275 PF03466 LysR substrate binding domain BI313_23290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BI313_23290 PF00529 HlyD membrane-fusion protein of T1SS BI313_23295 PF00873 AcrB/AcrD/AcrF family BI313_23300 PF00106 short chain dehydrogenase BI313_23305 PF02321 Outer membrane efflux protein BI313_23310 PF08448 PAS fold BI313_23310 PF00990 Diguanylate cyclase, GGDEF domain BI313_23320 PF13700 Domain of unknown function (DUF4158) BI313_23320 PF01526 Tn3 transposase DDE domain BI313_23330 PF13610 DDE domain BI313_23335 PF04956 TrbC/VIRB2 family BI313_23340 PF05101 Type IV secretory pathway, VirB3-like protein BI313_23345 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BI313_23355 PF03524 Conjugal transfer protein BI313_23365 PF03743 Bacterial conjugation TrbI-like protein BI313_23415 PF00239 Resolvase, N terminal domain BI313_23415 PF02796 Helix-turn-helix domain of resolvase BI313_23445 PF09278 MerR, DNA binding BI313_23445 PF00376 MerR family regulatory protein BI313_23450 PF02411 MerT mercuric transport protein BI313_23455 PF00403 Heavy-metal-associated domain BI313_23465 PF01526 Tn3 transposase DDE domain BI313_23465 PF13700 Domain of unknown function (DUF4158) BI313_23475 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase BI313_23480 PF01636 Phosphotransferase enzyme family BI313_23490 PF13610 DDE domain BI313_23495 PF00239 Resolvase, N terminal domain BI313_23495 PF02796 Helix-turn-helix domain of resolvase BI313_23500 PF13610 DDE domain BI313_23505 PF00437 Type II/IV secretion system protein BI313_23510 PF16509 TrfB plasmid transcriptional repressor BI313_23515 PF00436 Single-strand binding protein family BI313_23520 PF07042 TrfA protein BI313_23540 PF03230 Antirestriction protein BI313_23555 PF17383 Uncharacterized KorC regulated protein A BI313_23560 PF10892 Protein of unknown function (DUF2688) BI313_23565 PF17394 Uncharacterized KleE stable inheritance protein BI313_23570 PF10959 Protein of unknown function (DUF2761) BI313_23575 PF16509 TrfB plasmid transcriptional repressor BI313_23580 PF13614 AAA domain BI313_23585 PF08535 KorB domain BI313_23585 PF02195 ParB-like nuclease domain BI313_23585 PF06613 KorB C-terminal beta-barrel domain BI313_23590 PF11740 Plasmid replication region DNA-binding N-term BI313_23605 PF11657 Transcriptional activator TraM BI313_23610 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BI313_23615 PF17273 Family of unknown function (DUF5338) BI313_23625 PF03432 Relaxase/Mobilisation nuclease domain BI313_23625 PF18821 Large polyvalent protein-associated domain 7 BI313_23630 PF02534 Type IV secretory system Conjugative DNA transfer BI313_23635 PF10502 Signal peptidase, peptidase S26 BI313_23640 PF01131 DNA topoisomerase BI313_23640 PF01751 Toprim domain BI313_23650 PF13362 Toprim domain BI313_23650 PF18818 Metallopeptidase superfamily domain BI313_23650 PF08401 Domain of unknown function (DUF1738) BI313_23670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BI313_23670 PF03466 LysR substrate binding domain BI313_23680 PF00239 Resolvase, N terminal domain BI313_23680 PF02796 Helix-turn-helix domain of resolvase