locus-tag class description XBW1_0001 PF00308 Bacterial dnaA protein XBW1_0001 PF08299 Bacterial dnaA protein helix-turn-helix XBW1_0001 PF11638 DnaA N-terminal domain XBW1_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain XBW1_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain XBW1_0002 PF02767 DNA polymerase III beta subunit, central domain XBW1_0003 PF02463 RecF/RecN/SMC N terminal domain XBW1_0004 PF18053 DNA gyrase B subunit insert domain XBW1_0004 PF01751 Toprim domain XBW1_0004 PF00204 DNA gyrase B XBW1_0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XBW1_0004 PF00986 DNA gyrase B subunit, carboxyl terminus XBW1_0012 PF01118 Semialdehyde dehydrogenase, NAD binding domain XBW1_0012 PF02774 Semialdehyde dehydrogenase, dimerisation domain XBW1_0014 PF01797 Transposase IS200 like XBW1_0016 PF01694 Rhomboid family XBW1_0017 PF00743 Flavin-binding monooxygenase-like XBW1_0021 PF01380 SIS domain XBW1_0022 PF12804 MobA-like NTP transferase domain XBW1_0022 PF00132 Bacterial transferase hexapeptide (six repeats) XBW1_0023 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain XBW1_0023 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain XBW1_0024 PF02874 ATP synthase alpha/beta family, beta-barrel domain XBW1_0024 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XBW1_0025 PF00231 ATP synthase XBW1_0026 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XBW1_0026 PF00306 ATP synthase alpha/beta chain, C terminal domain XBW1_0026 PF02874 ATP synthase alpha/beta family, beta-barrel domain XBW1_0027 PF00213 ATP synthase delta (OSCP) subunit XBW1_0028 PF00430 ATP synthase B/B' CF(0) XBW1_0029 PF00137 ATP synthase subunit C XBW1_0030 PF00119 ATP synthase A chain XBW1_0031 PF03899 ATP synthase I chain XBW1_0032 PF02527 rRNA small subunit methyltransferase G XBW1_0033 PF13932 GidA associated domain XBW1_0033 PF01134 Glucose inhibited division protein A XBW1_0035 PF00258 Flavodoxin XBW1_0036 PF01037 Lrp/AsnC ligand binding domain XBW1_0037 PF03590 Aspartate-ammonia ligase XBW1_0038 PF05762 VWA domain containing CoxE-like protein XBW1_0039 PF12592 Protein of unknown function (DUF3763) XBW1_0039 PF17868 AAA lid domain XBW1_0039 PF07728 AAA domain (dynein-related subfamily) XBW1_0040 PF05025 RbsD / FucU transport protein family XBW1_0041 PF00005 ABC transporter XBW1_0042 PF02653 Branched-chain amino acid transport system / permease component XBW1_0043 PF13407 Periplasmic binding protein domain XBW1_0044 PF00294 pfkB family carbohydrate kinase XBW1_0045 PF00356 Bacterial regulatory proteins, lacI family XBW1_0046 PF07690 Major Facilitator Superfamily XBW1_0050 PF00474 Sodium:solute symporter family XBW1_0051 PF04341 Protein of unknown function, DUF485 XBW1_0052 PF13193 AMP-binding enzyme C-terminal domain XBW1_0052 PF16177 Acetyl-coenzyme A synthetase N-terminus XBW1_0052 PF00501 AMP-binding enzyme XBW1_0053 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XBW1_0053 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XBW1_0054 PF00579 tRNA synthetases class I (W and Y) XBW1_0055 PF13419 Haloacid dehalogenase-like hydrolase XBW1_0056 PF00834 Ribulose-phosphate 3 epimerase family XBW1_0057 PF02086 D12 class N6 adenine-specific DNA methyltransferase XBW1_0058 PF05036 Sporulation related domain XBW1_0059 PF01761 3-dehydroquinate synthase XBW1_0060 PF01202 Shikimate kinase XBW1_0061 PF03958 Bacterial type II/III secretion system short domain XBW1_0061 PF00263 Bacterial type II and III secretion system protein XBW1_0066 PF00912 Transglycosylase XBW1_0066 PF00905 Penicillin binding protein transpeptidase domain XBW1_0066 PF17092 Penicillin-binding protein OB-like domain XBW1_0069 PF00293 NUDIX domain XBW1_0071 PF07095 Intracellular growth attenuator protein IgaA XBW1_0072 PF01479 S4 domain XBW1_0073 PF01430 Hsp33 protein XBW1_0074 PF01293 Phosphoenolpyruvate carboxykinase XBW1_0075 PF02678 Pirin XBW1_0075 PF17954 Quercetinase C-terminal cupin domain XBW1_0077 PF00465 Iron-containing alcohol dehydrogenase XBW1_0078 PF00171 Aldehyde dehydrogenase family XBW1_0085 PF02661 Fic/DOC family XBW1_0085 PF13018 Extended Signal Peptide of Type V secretion system XBW1_0085 PF13332 Hemagglutinin repeat XBW1_0085 PF05860 haemagglutination activity domain XBW1_0085 PF03543 Yersinia/Haemophilus virulence surface antigen XBW1_0086 PF13808 DDE_Tnp_1-associated XBW1_0086 PF01609 Transposase DDE domain XBW1_0090 PF05638 Type VI secretion system effector, Hcp XBW1_0096 PF00171 Aldehyde dehydrogenase family XBW1_0098 PF07729 FCD domain XBW1_0098 PF00392 Bacterial regulatory proteins, gntR family XBW1_0100 PF00202 Aminotransferase class-III XBW1_0101 PF05656 Protein of unknown function (DUF805) XBW1_0102 PF01266 FAD dependent oxidoreductase XBW1_0105 PF00155 Aminotransferase class I and II XBW1_0106 PF13808 DDE_Tnp_1-associated XBW1_0106 PF01609 Transposase DDE domain XBW1_0109 PF02543 Carbamoyltransferase N-terminus XBW1_0109 PF16861 Carbamoyltransferase C-terminus XBW1_0117 PF01384 Phosphate transporter family XBW1_0118 PF01797 Transposase IS200 like XBW1_0119 PF10625 Universal stress protein B (UspB) XBW1_0120 PF00582 Universal stress protein family XBW1_0121 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XBW1_0121 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain XBW1_0122 PF04445 Putative SAM-dependent methyltransferase XBW1_0123 PF01432 Peptidase family M3 XBW1_0126 PF11941 Domain of unknown function (DUF3459) XBW1_0126 PF00128 Alpha amylase, catalytic domain XBW1_0127 PF00367 phosphotransferase system, EIIB XBW1_0127 PF02378 Phosphotransferase system, EIIC XBW1_0134 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 XBW1_0136 PF03841 L-seryl-tRNA selenium transferase XBW1_0137 PF01979 Amidohydrolase family XBW1_0143 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XBW1_0143 PF02378 Phosphotransferase system, EIIC XBW1_0143 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XBW1_0150 PF01177 Asp/Glu/Hydantoin racemase XBW1_0151 PF01820 D-ala D-ala ligase N-terminus XBW1_0151 PF07478 D-ala D-ala ligase C-terminus XBW1_0152 PF00132 Bacterial transferase hexapeptide (six repeats) XBW1_0153 PF08223 PaaX-like protein C-terminal domain XBW1_0153 PF07848 PaaX-like protein XBW1_0154 PF14535 AMP-binding enzyme C-terminal domain XBW1_0154 PF00501 AMP-binding enzyme XBW1_0155 PF00108 Thiolase, N-terminal domain XBW1_0155 PF02803 Thiolase, C-terminal domain XBW1_0156 PF03061 Thioesterase superfamily XBW1_0157 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XBW1_0157 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XBW1_0157 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain XBW1_0158 PF00378 Enoyl-CoA hydratase/isomerase XBW1_0159 PF00378 Enoyl-CoA hydratase/isomerase XBW1_0160 PF00175 Oxidoreductase NAD-binding domain XBW1_0160 PF00970 Oxidoreductase FAD-binding domain XBW1_0160 PF00111 2Fe-2S iron-sulfur cluster binding domain XBW1_0161 PF01883 Iron-sulfur cluster assembly protein XBW1_0162 PF05138 Phenylacetic acid catabolic protein XBW1_0163 PF06243 Phenylacetic acid degradation B XBW1_0164 PF05138 Phenylacetic acid catabolic protein XBW1_0165 PF00171 Aldehyde dehydrogenase family XBW1_0165 PF01575 MaoC like domain XBW1_0170 PF13358 DDE superfamily endonuclease XBW1_0174 PF00155 Aminotransferase class I and II XBW1_0175 PF10797 Protein of unknown function XBW1_0176 PF10941 Protein of unknown function DUF2620 XBW1_0177 PF02126 Phosphotriesterase family XBW1_0178 PF01168 Alanine racemase, N-terminal domain XBW1_0180 PF14503 YhfZ C-terminal domain XBW1_0180 PF14502 Helix-turn-helix domain XBW1_0182 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_0191 PF05638 Type VI secretion system effector, Hcp XBW1_0197 PF00589 Phage integrase family XBW1_0197 PF13356 Arm DNA-binding domain XBW1_0197 PF14659 Phage integrase, N-terminal SAM-like domain XBW1_0203 PF03400 IS1 transposase XBW1_0204 PF12759 InsA C-terminal domain XBW1_0204 PF03811 InsA N-terminal domain XBW1_0205 PF01609 Transposase DDE domain XBW1_0205 PF02281 Transposase Tn5 dimerisation domain XBW1_0205 PF14706 Transposase DNA-binding XBW1_0206 PF14706 Transposase DNA-binding XBW1_0206 PF02281 Transposase Tn5 dimerisation domain XBW1_0206 PF01609 Transposase DDE domain XBW1_0210 PF08845 Toxin SymE, type I toxin-antitoxin system XBW1_0222 PF04717 Type VI secretion system, phage-baseplate injector XBW1_0228 PF10431 C-terminal, D2-small domain, of ClpB protein XBW1_0228 PF17871 AAA lid domain XBW1_0228 PF00004 ATPase family associated with various cellular activities (AAA) XBW1_0228 PF07724 AAA domain (Cdc48 subfamily) XBW1_0239 PF05638 Type VI secretion system effector, Hcp XBW1_0240 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB XBW1_0240 PF08479 POTRA domain, ShlB-type XBW1_0240 PF17287 POTRA domain XBW1_0242 PF13358 DDE superfamily endonuclease XBW1_0244 PF03631 Virulence factor BrkB XBW1_0245 PF01361 Tautomerase enzyme XBW1_0247 PF07690 Major Facilitator Superfamily XBW1_0249 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_0249 PF03466 LysR substrate binding domain XBW1_0250 PF00675 Insulinase (Peptidase family M16) XBW1_0250 PF05193 Peptidase M16 inactive domain XBW1_0251 PF00672 HAMP domain XBW1_0251 PF00990 Diguanylate cyclase, GGDEF domain XBW1_0251 PF17154 Gammaproteobacterial periplasmic sensor domain XBW1_0251 PF00563 EAL domain XBW1_0252 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XBW1_0252 PF00005 ABC transporter XBW1_0253 PF00005 ABC transporter XBW1_0253 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XBW1_0254 PF12911 N-terminal TM domain of oligopeptide transport permease C XBW1_0254 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_0255 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_0256 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XBW1_0258 PF05746 DALR anticodon binding domain XBW1_0258 PF02092 Glycyl-tRNA synthetase beta subunit XBW1_0259 PF02091 Glycyl-tRNA synthetase alpha subunit XBW1_0260 PF03352 Methyladenine glycosylase XBW1_0261 PF00155 Aminotransferase class I and II XBW1_0263 PF07676 WD40-like Beta Propeller Repeat XBW1_0263 PF12566 Protein of unknown function (DUF3748) XBW1_0264 PF03458 UPF0126 domain XBW1_0265 PF03120 NAD-dependent DNA ligase OB-fold domain XBW1_0265 PF01653 NAD-dependent DNA ligase adenylation domain XBW1_0266 PF00625 Guanylate kinase XBW1_0267 PF01192 RNA polymerase Rpb6 XBW1_0268 PF02824 TGS domain XBW1_0268 PF04607 Region found in RelA / SpoT proteins XBW1_0268 PF13291 ACT domain XBW1_0270 PF17191 RecG wedge domain XBW1_0270 PF00271 Helicase conserved C-terminal domain XBW1_0270 PF00270 DEAD/DEAH box helicase XBW1_0271 PF03616 Sodium/glutamate symporter XBW1_0273 PF00860 Permease family XBW1_0274 PF05170 AsmA family XBW1_0275 PF09500 Putative thioesterase (yiiD_Cterm) XBW1_0275 PF00583 Acetyltransferase (GNAT) family XBW1_0276 PF02580 D-Tyr-tRNA(Tyr) deacylase XBW1_0277 PF13419 Haloacid dehalogenase-like hydrolase XBW1_0280 PF09134 Invasin, domain 3 XBW1_0280 PF07979 Intimin C-type lectin domain XBW1_0280 PF02369 Bacterial Ig-like domain (group 1) XBW1_0280 PF11924 Inverse autotransporter, beta-domain XBW1_0281 PF02371 Transposase IS116/IS110/IS902 family XBW1_0281 PF01548 Transposase XBW1_0289 PF12951 Passenger-associated-transport-repeat XBW1_0291 PF03951 Glutamine synthetase, beta-Grasp domain XBW1_0291 PF00120 Glutamine synthetase, catalytic domain XBW1_0292 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XBW1_0292 PF00512 His Kinase A (phospho-acceptor) domain XBW1_0293 PF00072 Response regulator receiver domain XBW1_0293 PF00158 Sigma-54 interaction domain XBW1_0293 PF02954 Bacterial regulatory protein, Fis family XBW1_0295 PF04055 Radical SAM superfamily XBW1_0295 PF06969 HemN C-terminal domain XBW1_0297 PF04220 Der GTPase activator (YihI) XBW1_0299 PF00860 Permease family XBW1_0309 PF05638 Type VI secretion system effector, Hcp XBW1_0310 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_0311 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_0312 PF00497 Bacterial extracellular solute-binding proteins, family 3 XBW1_0313 PF01797 Transposase IS200 like XBW1_0314 PF01895 PhoU domain XBW1_0315 PF00005 ABC transporter XBW1_0316 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_0317 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_0318 PF12849 PBP superfamily domain XBW1_0319 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XBW1_0319 PF00672 HAMP domain XBW1_0319 PF00512 His Kinase A (phospho-acceptor) domain XBW1_0320 PF00486 Transcriptional regulatory protein, C terminal XBW1_0320 PF00072 Response regulator receiver domain XBW1_0321 PF03449 Transcription elongation factor, N-terminal XBW1_0321 PF01272 Transcription elongation factor, GreA/GreB, C-term XBW1_0322 PF00575 S1 RNA binding domain XBW1_0322 PF16921 Tex protein YqgF-like domain XBW1_0322 PF17674 HHH domain XBW1_0322 PF09371 Tex-like protein N-terminal domain XBW1_0324 PF04023 FeoA domain XBW1_0325 PF02421 Ferrous iron transport protein B XBW1_0325 PF07664 Ferrous iron transport protein B C terminus XBW1_0325 PF17910 FeoB cytosolic helical domain XBW1_0325 PF07670 Nucleoside recognition XBW1_0326 PF09012 FeoC like transcriptional regulator XBW1_0327 PF05016 ParE toxin of type II toxin-antitoxin system, parDE XBW1_0328 PF04221 RelB antitoxin XBW1_0330 PF00561 alpha/beta hydrolase fold XBW1_0331 PF00156 Phosphoribosyl transferase domain XBW1_0332 PF01106 NifU-like domain XBW1_0332 PF01521 Iron-sulphur cluster biosynthesis XBW1_0333 PF00581 Rhodanese-like domain XBW1_0334 PF01694 Rhomboid family XBW1_0334 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease XBW1_0335 PF00455 DeoR C terminal sensor domain XBW1_0335 PF08220 DeoR-like helix-turn-helix domain XBW1_0337 PF01266 FAD dependent oxidoreductase XBW1_0337 PF16901 C-terminal domain of alpha-glycerophosphate oxidase XBW1_0340 PF14502 Helix-turn-helix domain XBW1_0340 PF14503 YhfZ C-terminal domain XBW1_0341 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_0344 PF03354 Phage Terminase XBW1_0345 PF13693 Winged helix-turn-helix DNA-binding XBW1_0348 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ XBW1_0349 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XBW1_0349 PF07992 Pyridine nucleotide-disulphide oxidoreductase XBW1_0353 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XBW1_0353 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XBW1_0354 PF00325 Bacterial regulatory proteins, crp family XBW1_0354 PF04198 Putative sugar-binding domain XBW1_0355 PF00005 ABC transporter XBW1_0356 PF02653 Branched-chain amino acid transport system / permease component XBW1_0357 PF02653 Branched-chain amino acid transport system / permease component XBW1_0358 PF13407 Periplasmic binding protein domain XBW1_0359 PF01791 DeoC/LacD family aldolase XBW1_0360 PF03992 Antibiotic biosynthesis monooxygenase XBW1_0364 PF01209 ubiE/COQ5 methyltransferase family XBW1_0365 PF03205 Molybdopterin guanine dinucleotide synthesis protein B XBW1_0366 PF12804 MobA-like NTP transferase domain XBW1_0367 PF01636 Phosphotransferase enzyme family XBW1_0368 PF01323 DSBA-like thioredoxin domain XBW1_0369 PF01367 5'-3' exonuclease, C-terminal SAM fold XBW1_0369 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XBW1_0369 PF01612 3'-5' exonuclease XBW1_0369 PF00476 DNA polymerase family A XBW1_0370 PF01926 50S ribosome-binding GTPase XBW1_0371 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XBW1_0372 PF00117 Glutamine amidotransferase class-I XBW1_0374 PF13545 Crp-like helix-turn-helix domain XBW1_0374 PF00027 Cyclic nucleotide-binding domain XBW1_0375 PF00485 Phosphoribulokinase / Uridine kinase family XBW1_0376 PF06794 Uncharacterised protein family (UPF0270) XBW1_0377 PF01810 LysE type translocator XBW1_0378 PF02378 Phosphotransferase system, EIIC XBW1_0378 PF00367 phosphotransferase system, EIIB XBW1_0379 PF13580 SIS domain XBW1_0380 PF03811 InsA N-terminal domain XBW1_0380 PF12759 InsA C-terminal domain XBW1_0381 PF03400 IS1 transposase XBW1_0383 PF02371 Transposase IS116/IS110/IS902 family XBW1_0383 PF01548 Transposase XBW1_0384 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_0384 PF03466 LysR substrate binding domain XBW1_0386 PF00005 ABC transporter XBW1_0386 PF12848 ABC transporter XBW1_0387 PF02525 Flavodoxin-like fold XBW1_0388 PF02254 TrkA-N domain XBW1_0388 PF00999 Sodium/hydrogen exchanger family XBW1_0389 PF09526 Probable metal-binding protein (DUF2387) XBW1_0391 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XBW1_0392 PF04102 SlyX XBW1_0393 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XBW1_0393 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XBW1_0394 PF13309 HTH domain XBW1_0394 PF08348 YheO-like PAS domain XBW1_0395 PF02635 DsrE/DsrF-like family XBW1_0396 PF02635 DsrE/DsrF-like family XBW1_0397 PF04077 DsrH like protein XBW1_0398 PF00164 Ribosomal protein S12/S23 XBW1_0399 PF00177 Ribosomal protein S7p/S5e XBW1_0400 PF03144 Elongation factor Tu domain 2 XBW1_0400 PF00009 Elongation factor Tu GTP binding domain XBW1_0400 PF03764 Elongation factor G, domain IV XBW1_0400 PF14492 Elongation Factor G, domain II XBW1_0400 PF00679 Elongation factor G C-terminus XBW1_0401 PF03143 Elongation factor Tu C-terminal domain XBW1_0401 PF03144 Elongation factor Tu domain 2 XBW1_0401 PF00009 Elongation factor Tu GTP binding domain XBW1_0403 PF00584 SecE/Sec61-gamma subunits of protein translocation complex XBW1_0404 PF00467 KOW motif XBW1_0404 PF02357 Transcription termination factor nusG XBW1_0405 PF00298 Ribosomal protein L11, RNA binding domain XBW1_0405 PF03946 Ribosomal protein L11, N-terminal domain XBW1_0406 PF00687 Ribosomal protein L1p/L10e family XBW1_0407 PF00466 Ribosomal protein L10 XBW1_0408 PF00542 Ribosomal protein L7/L12 C-terminal domain XBW1_0408 PF16320 Ribosomal protein L7/L12 dimerisation domain XBW1_0409 PF00562 RNA polymerase Rpb2, domain 6 XBW1_0409 PF04561 RNA polymerase Rpb2, domain 2 XBW1_0409 PF10385 RNA polymerase beta subunit external 1 domain XBW1_0409 PF04563 RNA polymerase beta subunit XBW1_0409 PF04560 RNA polymerase Rpb2, domain 7 XBW1_0409 PF04565 RNA polymerase Rpb2, domain 3 XBW1_0410 PF04998 RNA polymerase Rpb1, domain 5 XBW1_0410 PF04983 RNA polymerase Rpb1, domain 3 XBW1_0410 PF04997 RNA polymerase Rpb1, domain 1 XBW1_0410 PF00623 RNA polymerase Rpb1, domain 2 XBW1_0410 PF05000 RNA polymerase Rpb1, domain 4 XBW1_0411 PF01522 Polysaccharide deacetylase XBW1_0412 PF07148 Maltose operon periplasmic protein precursor (MalM) XBW1_0414 PF02264 LamB porin XBW1_0415 PF00005 ABC transporter XBW1_0415 PF17912 MalK OB fold domain XBW1_0416 PF01547 Bacterial extracellular solute-binding protein XBW1_0417 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_0417 PF14785 Maltose transport system permease protein MalF P2 domain XBW1_0418 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_0419 PF02446 4-alpha-glucanotransferase XBW1_0420 PF00343 Carbohydrate phosphorylase XBW1_0421 PF17874 MalT-like TPR region XBW1_0421 PF00196 Bacterial regulatory proteins, luxR family XBW1_0422 PF00202 Aminotransferase class-III XBW1_0423 PF00107 Zinc-binding dehydrogenase XBW1_0423 PF08240 Alcohol dehydrogenase GroES-like domain XBW1_0424 PF13419 Haloacid dehalogenase-like hydrolase XBW1_0425 PF07690 Major Facilitator Superfamily XBW1_0427 PF04055 Radical SAM superfamily XBW1_0427 PF06968 Biotin and Thiamin Synthesis associated domain XBW1_0428 PF05690 Thiazole biosynthesis protein ThiG XBW1_0429 PF02597 ThiS family XBW1_0430 PF00899 ThiF family XBW1_0431 PF02581 Thiamine monophosphate synthase XBW1_0432 PF13667 ThiC-associated domain XBW1_0432 PF01964 Radical SAM ThiC family XBW1_0435 PF00293 NUDIX domain XBW1_0435 PF09297 NADH pyrophosphatase zinc ribbon domain XBW1_0436 PF01208 Uroporphyrinogen decarboxylase (URO-D) XBW1_0437 PF04493 Endonuclease V XBW1_0438 PF04222 Protein of unknown function (DUF416) XBW1_0439 PF00216 Bacterial DNA-binding protein XBW1_0440 PF07356 Protein of unknown function (DUF1481) XBW1_0441 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain XBW1_0441 PF02843 Phosphoribosylglycinamide synthetase, C domain XBW1_0441 PF02844 Phosphoribosylglycinamide synthetase, N domain XBW1_0442 PF01808 AICARFT/IMPCHase bienzyme XBW1_0442 PF02142 MGS-like domain XBW1_0447 PF01566 Natural resistance-associated macrophage protein XBW1_0448 PF03746 LamB/YcsF family XBW1_0449 PF02682 Carboxyltransferase domain, subdomain C and D XBW1_0450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XBW1_0450 PF00289 Biotin carboxylase, N-terminal domain XBW1_0450 PF02785 Biotin carboxylase C-terminal domain XBW1_0450 PF00364 Biotin-requiring enzyme XBW1_0453 PF02313 Fumarate reductase subunit D XBW1_0454 PF02300 Fumarate reductase subunit C XBW1_0455 PF13183 4Fe-4S dicluster domain XBW1_0455 PF13085 2Fe-2S iron-sulfur cluster binding domain XBW1_0456 PF02910 Fumarate reductase flavoprotein C-term XBW1_0456 PF00890 FAD binding domain XBW1_0457 PF00152 tRNA synthetases class II (D, K and N) XBW1_0458 PF03009 Glycerophosphoryl diester phosphodiesterase family XBW1_0459 PF07690 Major Facilitator Superfamily XBW1_0460 PF00550 Phosphopantetheine attachment site XBW1_0460 PF00668 Condensation domain XBW1_0460 PF00501 AMP-binding enzyme XBW1_0460 PF07993 Male sterility protein XBW1_0460 PF13193 AMP-binding enzyme C-terminal domain XBW1_0463 PF00465 Iron-containing alcohol dehydrogenase XBW1_0465 PF02592 Putative vitamin uptake transporter XBW1_0466 PF01206 Sulfurtransferase TusA XBW1_0467 PF00403 Heavy-metal-associated domain XBW1_0468 PF06611 Protein of unknown function (DUF1145) XBW1_0471 PF00448 SRP54-type protein, GTPase domain XBW1_0471 PF00448 SRP54-type protein, GTPase domain XBW1_0471 PF02881 SRP54-type protein, helical bundle domain XBW1_0471 PF02881 SRP54-type protein, helical bundle domain XBW1_0472 PF00005 ABC transporter XBW1_0473 PF02687 FtsX-like permease family XBW1_0473 PF18075 FtsX extracellular domain XBW1_0474 PF04545 Sigma-70, region 4 XBW1_0474 PF04542 Sigma-70 region 2 XBW1_0474 PF00140 Sigma-70 factor, region 1.2 XBW1_0475 PF02595 Glycerate kinase family XBW1_0476 PF12568 Acetyltransferase (GNAT) domain, PanZ XBW1_0480 PF04717 Type VI secretion system, phage-baseplate injector XBW1_0486 PF01609 Transposase DDE domain XBW1_0486 PF13808 DDE_Tnp_1-associated XBW1_0487 PF13458 Periplasmic binding protein XBW1_0488 PF02653 Branched-chain amino acid transport system / permease component XBW1_0489 PF02653 Branched-chain amino acid transport system / permease component XBW1_0489 PF11862 Domain of unknown function (DUF3382) XBW1_0490 PF00005 ABC transporter XBW1_0490 PF12399 Branched-chain amino acid ATP-binding cassette transporter XBW1_0491 PF00005 ABC transporter XBW1_0498 PF13358 DDE superfamily endonuclease XBW1_0501 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain XBW1_0501 PF18413 Neuraminidase-like domain XBW1_0502 PF03538 Salmonella virulence plasmid 28.1kDa A protein XBW1_0503 PF00704 Glycosyl hydrolases family 18 XBW1_0504 PF07690 Major Facilitator Superfamily XBW1_0505 PF01381 Helix-turn-helix XBW1_0524 PF13693 Winged helix-turn-helix DNA-binding XBW1_0526 PF02954 Bacterial regulatory protein, Fis family XBW1_0527 PF01207 Dihydrouridine synthase (Dus) XBW1_0529 PF00474 Sodium:solute symporter family XBW1_0530 PF06196 Protein of unknown function (DUF997) XBW1_0532 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XBW1_0532 PF02785 Biotin carboxylase C-terminal domain XBW1_0532 PF00289 Biotin carboxylase, N-terminal domain XBW1_0533 PF00364 Biotin-requiring enzyme XBW1_0534 PF01220 Dehydroquinase class II XBW1_0535 PF00107 Zinc-binding dehydrogenase XBW1_0535 PF08240 Alcohol dehydrogenase GroES-like domain XBW1_0537 PF04085 rod shape-determining protein MreC XBW1_0538 PF04093 rod shape-determining protein MreD XBW1_0539 PF02545 Maf-like protein XBW1_0540 PF10150 Ribonuclease E/G family XBW1_0540 PF00575 S1 RNA binding domain XBW1_0541 PF13502 AsmA-like C-terminal region XBW1_0541 PF13116 Protein of unknown function XBW1_0542 PF00795 Carbon-nitrogen hydrolase XBW1_0543 PF01523 Putative modulator of DNA gyrase XBW1_0545 PF01337 Barstar (barnase inhibitor) XBW1_0552 PF04751 Protein of unknown function (DUF615) XBW1_0553 PF01523 Putative modulator of DNA gyrase XBW1_0554 PF14760 Rnk N-terminus XBW1_0554 PF01272 Transcription elongation factor, GreA/GreB, C-term XBW1_0557 PF00381 PTS HPr component phosphorylation site XBW1_0558 PF03668 P-loop ATPase protein family XBW1_0559 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XBW1_0560 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XBW1_0561 PF00309 Sigma-54 factor, Activator interacting domain (AID) XBW1_0561 PF04963 Sigma-54 factor, core binding domain XBW1_0561 PF04552 Sigma-54, DNA binding domain XBW1_0562 PF00005 ABC transporter XBW1_0562 PF12399 Branched-chain amino acid ATP-binding cassette transporter XBW1_0563 PF03968 OstA-like protein XBW1_0564 PF06835 Lipopolysaccharide-assembly, LptC-related XBW1_0566 PF00571 CBS domain XBW1_0566 PF01380 SIS domain XBW1_0567 PF01699 Sodium/calcium exchanger protein XBW1_0568 PF00005 ABC transporter XBW1_0569 PF02405 Permease MlaE XBW1_0570 PF02470 MlaD protein XBW1_0571 PF05494 MlaC protein XBW1_0573 PF01722 BolA-like protein XBW1_0574 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XBW1_0575 PF13180 PDZ domain XBW1_0577 PF00595 PDZ domain XBW1_0577 PF13180 PDZ domain XBW1_0578 PF06295 Protein of unknown function (DUF1043) XBW1_0580 PF03969 AFG1-like ATPase XBW1_0581 PF00572 Ribosomal protein L13 XBW1_0582 PF00380 Ribosomal protein S9/S16 XBW1_0583 PF02798 Glutathione S-transferase, N-terminal domain XBW1_0583 PF00043 Glutathione S-transferase, C-terminal domain XBW1_0584 PF04386 Stringent starvation protein B XBW1_0586 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster XBW1_0586 PF07992 Pyridine nucleotide-disulphide oxidoreductase XBW1_0587 PF04898 Glutamate synthase central domain XBW1_0587 PF01645 Conserved region in glutamate synthase XBW1_0587 PF01493 GXGXG motif XBW1_0587 PF00310 Glutamine amidotransferases class-II XBW1_0588 PF00072 Response regulator receiver domain XBW1_0588 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XBW1_0588 PF00512 His Kinase A (phospho-acceptor) domain XBW1_0588 PF18415 Histidine kinase receptor ArcB trans-membrane domain XBW1_0588 PF01627 Hpt domain XBW1_0588 PF00989 PAS fold XBW1_0590 PF00912 Transglycosylase XBW1_0591 PF04972 BON domain XBW1_0592 PF13580 SIS domain XBW1_0593 PF02021 Uncharacterised protein family UPF0102 XBW1_0594 PF04348 LppC putative lipoprotein XBW1_0595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XBW1_0596 PF02678 Pirin XBW1_0596 PF17954 Quercetinase C-terminal cupin domain XBW1_0597 PF03466 LysR substrate binding domain XBW1_0597 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_0598 PF07681 DoxX XBW1_0600 PF13358 DDE superfamily endonuclease XBW1_0604 PF00107 Zinc-binding dehydrogenase XBW1_0604 PF08240 Alcohol dehydrogenase GroES-like domain XBW1_0607 PF07332 Putative Actinobacterial Holin-X, holin superfamily III XBW1_0608 PF05957 Bacterial protein of unknown function (DUF883) XBW1_0609 PF09335 SNARE associated Golgi protein XBW1_0610 PF00375 Sodium:dicarboxylate symporter family XBW1_0611 PF07992 Pyridine nucleotide-disulphide oxidoreductase XBW1_0611 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XBW1_0613 PF04393 Protein of unknown function (DUF535) XBW1_0614 PF13673 Acetyltransferase (GNAT) domain XBW1_0615 PF07690 Major Facilitator Superfamily XBW1_0616 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_0616 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_0619 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_0619 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_0624 PF00535 Glycosyl transferase family 2 XBW1_0625 PF07977 FabA-like domain XBW1_0626 PF13193 AMP-binding enzyme C-terminal domain XBW1_0626 PF00501 AMP-binding enzyme XBW1_0626 PF16177 Acetyl-coenzyme A synthetase N-terminus XBW1_0628 PF00550 Phosphopantetheine attachment site XBW1_0629 PF00550 Phosphopantetheine attachment site XBW1_0638 PF07690 Major Facilitator Superfamily XBW1_0639 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XBW1_0640 PF00891 O-methyltransferase domain XBW1_0640 PF16864 Dimerisation domain XBW1_0641 PF03781 Sulfatase-modifying factor enzyme 1 XBW1_0641 PF00069 Protein kinase domain XBW1_0647 PF01526 Tn3 transposase DDE domain XBW1_0647 PF13700 Domain of unknown function (DUF4158) XBW1_0649 PF13592 Winged helix-turn helix XBW1_0649 PF13358 DDE superfamily endonuclease XBW1_0656 PF13693 Winged helix-turn-helix DNA-binding XBW1_0658 PF04545 Sigma-70, region 4 XBW1_0658 PF04539 Sigma-70 region 3 XBW1_0658 PF04542 Sigma-70 region 2 XBW1_0658 PF00140 Sigma-70 factor, region 1.2 XBW1_0658 PF03979 Sigma-70 factor, region 1.1 XBW1_0658 PF04546 Sigma-70, non-essential region XBW1_0659 PF01807 CHC2 zinc finger XBW1_0659 PF10410 DnaB-helicase binding domain of primase XBW1_0659 PF08278 DNA primase DnaG DnaB-binding XBW1_0659 PF08275 DNA primase catalytic core, N-terminal domain XBW1_0660 PF01165 Ribosomal protein S21 XBW1_0661 PF00814 Glycoprotease family XBW1_0662 PF00891 O-methyltransferase domain XBW1_0663 PF02660 Glycerol-3-phosphate acyltransferase XBW1_0664 PF02152 Dihydroneopterin aldolase XBW1_0665 PF01966 HD domain XBW1_0665 PF01743 Poly A polymerase head domain XBW1_0665 PF12627 Probable RNA and SrmB- binding site of polymerase A XBW1_0666 PF08239 Bacterial SH3 domain XBW1_0667 PF01928 CYTH domain XBW1_0668 PF03710 Glutamate-ammonia ligase adenylyltransferase XBW1_0668 PF08335 GlnD PII-uridylyltransferase XBW1_0669 PF01467 Cytidylyltransferase-like XBW1_0669 PF00294 pfkB family carbohydrate kinase XBW1_0670 PF04380 Membrane fusogenic activity XBW1_0671 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase XBW1_0672 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XBW1_0673 PF03738 Glutathionylspermidine synthase preATP-grasp XBW1_0674 PF06693 Protein of unknown function (DUF1190) XBW1_0675 PF02321 Outer membrane efflux protein XBW1_0676 PF00293 NUDIX domain XBW1_0677 PF00149 Calcineurin-like phosphoesterase XBW1_0678 PF05728 Uncharacterised protein family (UPF0227) XBW1_0679 PF01751 Toprim domain XBW1_0679 PF00204 DNA gyrase B XBW1_0679 PF00986 DNA gyrase B subunit, carboxyl terminus XBW1_0679 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XBW1_0680 PF03989 DNA gyrase C-terminal domain, beta-propeller XBW1_0680 PF00521 DNA gyrase/topoisomerase IV, subunit A XBW1_0681 PF01553 Acyltransferase XBW1_0682 PF07731 Multicopper oxidase XBW1_0682 PF07732 Multicopper oxidase XBW1_0683 PF00186 Dihydrofolate reductase XBW1_0684 PF00149 Calcineurin-like phosphoesterase XBW1_0685 PF04379 ApaG domain XBW1_0686 PF00398 Ribosomal RNA adenine dimethylase XBW1_0687 PF04166 Pyridoxal phosphate biosynthetic protein PdxA XBW1_0688 PF09312 SurA N-terminal domain XBW1_0689 PF03968 OstA-like protein XBW1_0689 PF04453 LPS transport system D XBW1_0690 PF05099 Tellurite resistance protein TerB XBW1_0690 PF00226 DnaJ domain XBW1_0691 PF00849 RNA pseudouridylate synthase XBW1_0692 PF12137 RNA polymerase recycling family C-terminal XBW1_0692 PF18337 RapA N-terminal Tudor like domain XBW1_0692 PF18339 RapA N-terminal Tudor like domain 1 XBW1_0692 PF00176 SNF2 family N-terminal domain XBW1_0692 PF00271 Helicase conserved C-terminal domain XBW1_0693 PF03104 DNA polymerase family B, exonuclease domain XBW1_0693 PF00136 DNA polymerase family B XBW1_0703 PF13358 DDE superfamily endonuclease XBW1_0706 PF01212 Beta-eliminating lyase XBW1_0710 PF00589 Phage integrase family XBW1_0711 PF02342 TerD domain XBW1_0712 PF02342 TerD domain XBW1_0713 PF03741 Integral membrane protein TerC family XBW1_0714 PF05099 Tellurite resistance protein TerB XBW1_0715 PF02342 TerD domain XBW1_0716 PF02342 TerD domain XBW1_0719 PF11202 Phosphoribosyl transferase (PRTase) XBW1_0719 PF15608 PELOTA RNA binding domain XBW1_0723 PF03350 Uncharacterized protein family, UPF0114 XBW1_0726 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XBW1_0726 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XBW1_0728 PF00550 Phosphopantetheine attachment site XBW1_0729 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XBW1_0729 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XBW1_0729 PF02770 Acyl-CoA dehydrogenase, middle domain XBW1_0733 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_0738 PF00668 Condensation domain XBW1_0738 PF13193 AMP-binding enzyme C-terminal domain XBW1_0738 PF00501 AMP-binding enzyme XBW1_0738 PF00550 Phosphopantetheine attachment site XBW1_0739 PF16197 Ketoacyl-synthetase C-terminal extension XBW1_0739 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_0739 PF00668 Condensation domain XBW1_0739 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_0739 PF00550 Phosphopantetheine attachment site XBW1_0739 PF00550 Phosphopantetheine attachment site XBW1_0739 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_0739 PF16197 Ketoacyl-synthetase C-terminal extension XBW1_0739 PF00668 Condensation domain XBW1_0739 PF00698 Acyl transferase domain XBW1_0739 PF00698 Acyl transferase domain XBW1_0739 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_0740 PF00975 Thioesterase domain XBW1_0741 PF17074 Darcynin, domain of unknown function XBW1_0742 PF00550 Phosphopantetheine attachment site XBW1_0742 PF00668 Condensation domain XBW1_0742 PF13193 AMP-binding enzyme C-terminal domain XBW1_0742 PF00501 AMP-binding enzyme XBW1_0744 PF13358 DDE superfamily endonuclease XBW1_0745 PF13358 DDE superfamily endonuclease XBW1_0751 PF01381 Helix-turn-helix XBW1_0754 PF08845 Toxin SymE, type I toxin-antitoxin system XBW1_0771 PF04860 Phage portal protein XBW1_0773 PF03354 Phage Terminase XBW1_0783 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_0786 PF06530 Phage antitermination protein Q XBW1_0787 PF03796 DnaB-like helicase C terminal domain XBW1_0787 PF00772 DnaB-like helicase N terminal domain XBW1_0788 PF01695 IstB-like ATP binding protein XBW1_0795 PF02413 Caudovirales tail fibre assembly protein, lambda gpK XBW1_0796 PF07484 Phage Tail Collar Domain XBW1_0796 PF03335 Phage tail fibre repeat XBW1_0796 PF08400 Prophage tail fibre N-terminal XBW1_0804 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ XBW1_0805 PF04221 RelB antitoxin XBW1_0810 PF12441 CopG antitoxin of type II toxin-antitoxin system XBW1_0825 PF04233 Phage Mu protein F like protein XBW1_0826 PF06381 Protein of unknown function (DUF1073) XBW1_0833 PF03245 Bacteriophage Rz lysis protein XBW1_0847 PF01695 IstB-like ATP binding protein XBW1_0852 PF00717 Peptidase S24-like XBW1_0852 PF01381 Helix-turn-helix XBW1_0864 PF00929 Exonuclease XBW1_0875 PF00589 Phage integrase family XBW1_0876 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain XBW1_0876 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain XBW1_0879 PF01406 tRNA synthetases class I (C) catalytic domain XBW1_0879 PF09190 DALR domain XBW1_0880 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XBW1_0881 PF00149 Calcineurin-like phosphoesterase XBW1_0882 PF00731 AIR carboxylase XBW1_0883 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain XBW1_0883 PF02222 ATP-grasp domain XBW1_0884 PF00677 Lumazine binding domain XBW1_0887 PF00296 Luciferase-like monooxygenase XBW1_0889 PF00005 ABC transporter XBW1_0890 PF13472 GDSL-like Lipase/Acylhydrolase family XBW1_0891 PF00106 short chain dehydrogenase XBW1_0892 PF00085 Thioredoxin XBW1_0893 PF16200 C-terminal region of band_7 XBW1_0893 PF01145 SPFH domain / Band 7 family XBW1_0895 PF13411 MerR HTH family regulatory protein XBW1_0896 PF00403 Heavy-metal-associated domain XBW1_0897 PF01963 TraB family XBW1_0898 PF04073 Aminoacyl-tRNA editing domain XBW1_0901 PF02872 5'-nucleotidase, C-terminal domain XBW1_0901 PF00149 Calcineurin-like phosphoesterase XBW1_0902 PF07690 Major Facilitator Superfamily XBW1_0903 PF02254 TrkA-N domain XBW1_0903 PF00999 Sodium/hydrogen exchanger family XBW1_0904 PF00294 pfkB family carbohydrate kinase XBW1_0905 PF02706 Chain length determinant protein XBW1_0906 PF00762 Ferrochelatase XBW1_0907 PF05191 Adenylate kinase, active site lid XBW1_0908 PF00183 Hsp90 protein XBW1_0908 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XBW1_0911 PF13662 Toprim domain XBW1_0911 PF02132 RecR protein XBW1_0912 PF02575 YbaB/EbfC DNA-binding family XBW1_0913 PF12170 DNA polymerase III tau subunit V interacting with alpha XBW1_0913 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding XBW1_0913 PF12169 DNA polymerase III subunits gamma and tau domain III XBW1_0914 PF00156 Phosphoribosyl transferase domain XBW1_0916 PF10689 Protein of unknown function (DUF2496) XBW1_0917 PF00924 Mechanosensitive ion channel XBW1_0917 PF12794 Mechanosensitive ion channel inner membrane domain 1 XBW1_0917 PF12795 Mechanosensitive ion channel porin domain XBW1_0918 PF00440 Bacterial regulatory proteins, tetR family XBW1_0918 PF08361 MAATS-type transcriptional repressor, C-terminal region XBW1_0919 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XBW1_0919 PF00529 HlyD membrane-fusion protein of T1SS XBW1_0920 PF00873 AcrB/AcrD/AcrF family XBW1_0921 PF10757 Biofilm formation regulator YbaJ XBW1_0922 PF05321 Haemolysin expression modulating protein XBW1_0924 PF03811 InsA N-terminal domain XBW1_0924 PF12759 InsA C-terminal domain XBW1_0925 PF03400 IS1 transposase XBW1_0927 PF00909 Ammonium Transporter Family XBW1_0928 PF00543 Nitrogen regulatory protein P-II XBW1_0930 PF00664 ABC transporter transmembrane region XBW1_0930 PF00005 ABC transporter XBW1_0931 PF00664 ABC transporter transmembrane region XBW1_0931 PF00005 ABC transporter XBW1_0932 PF13404 AsnC-type helix-turn-helix domain XBW1_0932 PF01037 Lrp/AsnC ligand binding domain XBW1_0934 PF06508 Queuosine biosynthesis protein QueC XBW1_0937 PF13145 PPIC-type PPIASE domain XBW1_0938 PF00216 Bacterial DNA-binding protein XBW1_0939 PF02190 ATP-dependent protease La (LON) substrate-binding domain XBW1_0939 PF00004 ATPase family associated with various cellular activities (AAA) XBW1_0939 PF05362 Lon protease (S16) C-terminal proteolytic domain XBW1_0940 PF06689 ClpX C4-type zinc finger XBW1_0940 PF10431 C-terminal, D2-small domain, of ClpB protein XBW1_0940 PF07724 AAA domain (Cdc48 subfamily) XBW1_0941 PF00574 Clp protease XBW1_0942 PF05698 Bacterial trigger factor protein (TF) C-terminus XBW1_0942 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XBW1_0942 PF05697 Bacterial trigger factor protein (TF) XBW1_0944 PF01722 BolA-like protein XBW1_0945 PF08139 Prokaryotic membrane lipoprotein lipid attachment site XBW1_0945 PF03923 Uncharacterized lipoprotein XBW1_0946 PF07690 Major Facilitator Superfamily XBW1_0948 PF03502 Nucleoside-specific channel-forming protein, Tsx XBW1_0949 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XBW1_0949 PF06481 COX Aromatic Rich Motif XBW1_0950 PF00115 Cytochrome C and Quinol oxidase polypeptide I XBW1_0951 PF00510 Cytochrome c oxidase subunit III XBW1_0952 PF03626 Prokaryotic Cytochrome C oxidase subunit IV XBW1_0953 PF01040 UbiA prenyltransferase family XBW1_0954 PF07690 Major Facilitator Superfamily XBW1_0955 PF00704 Glycosyl hydrolases family 18 XBW1_0956 PF04461 Protein of unknown function (DUF520) XBW1_0957 PF02558 Ketopantoate reductase PanE/ApbA XBW1_0957 PF08546 Ketopantoate reductase PanE/ApbA C terminal XBW1_0958 PF01965 DJ-1/PfpI family XBW1_0959 PF02568 Thiamine biosynthesis protein (ThiI) XBW1_0959 PF02926 THUMP domain XBW1_0960 PF02609 Exonuclease VII small subunit XBW1_0961 PF00348 Polyprenyl synthetase XBW1_0962 PF13292 1-deoxy-D-xylulose-5-phosphate synthase XBW1_0962 PF02779 Transketolase, pyrimidine binding domain XBW1_0962 PF02780 Transketolase, C-terminal domain XBW1_0970 PF01470 Pyroglutamyl peptidase XBW1_0971 PF04608 Phosphatidylglycerophosphatase A XBW1_0972 PF02769 AIR synthase related protein, C-terminal domain XBW1_0972 PF00586 AIR synthase related protein, N-terminal domain XBW1_0973 PF01029 NusB family XBW1_0974 PF00885 6,7-dimethyl-8-ribityllumazine synthase XBW1_0975 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XBW1_0975 PF01872 RibD C-terminal domain XBW1_0976 PF03477 ATP cone domain XBW1_0977 PF07549 SecD/SecF GG Motif XBW1_0977 PF02355 Protein export membrane protein XBW1_0978 PF13721 SecD export protein N-terminal TM region XBW1_0978 PF07549 SecD/SecF GG Motif XBW1_0978 PF02355 Protein export membrane protein XBW1_0979 PF02699 Preprotein translocase subunit XBW1_0980 PF01702 Queuine tRNA-ribosyltransferase XBW1_0981 PF02547 Queuosine biosynthesis protein XBW1_0982 PF04336 Acyl carrier protein phosphodiesterase XBW1_0984 PF10417 C-terminal domain of 1-Cys peroxiredoxin XBW1_0984 PF00578 AhpC/TSA family XBW1_0986 PF05525 Branched-chain amino acid transport protein XBW1_0988 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XBW1_0988 PF00512 His Kinase A (phospho-acceptor) domain XBW1_0988 PF11808 Phosphate regulon sensor protein PhoR XBW1_0988 PF00989 PAS fold XBW1_0989 PF00486 Transcriptional regulatory protein, C terminal XBW1_0989 PF00072 Response regulator receiver domain XBW1_0990 PF12320 Type 5 capsule protein repressor C-terminal domain XBW1_0990 PF00149 Calcineurin-like phosphoesterase XBW1_0991 PF13476 AAA domain XBW1_0995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XBW1_0996 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XBW1_0997 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XBW1_0998 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XBW1_0999 PF00149 Calcineurin-like phosphoesterase XBW1_1000 PF00149 Calcineurin-like phosphoesterase XBW1_1000 PF02872 5'-nucleotidase, C-terminal domain XBW1_1001 PF00480 ROK family XBW1_1003 PF04381 Putative exonuclease, RdgC XBW1_1004 PF00267 Gram-negative porin XBW1_1006 PF08361 MAATS-type transcriptional repressor, C-terminal region XBW1_1006 PF00440 Bacterial regulatory proteins, tetR family XBW1_1007 PF02492 CobW/HypB/UreG, nucleotide-binding domain XBW1_1008 PF07691 PA14 domain XBW1_1008 PF02838 Glycosyl hydrolase family 20, domain 2 XBW1_1008 PF00728 Glycosyl hydrolase family 20, catalytic domain XBW1_1027 PF03354 Phage Terminase XBW1_1031 PF00929 Exonuclease XBW1_1035 PF02472 Biopolymer transport protein ExbD/TolR XBW1_1036 PF01618 MotA/TolQ/ExbB proton channel family XBW1_1038 PF01053 Cys/Met metabolism PLP-dependent enzyme XBW1_1039 PF09335 SNARE associated Golgi protein XBW1_1040 PF00248 Aldo/keto reductase family XBW1_1042 PF02142 MGS-like domain XBW1_1042 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XBW1_1042 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XBW1_1043 PF00117 Glutamine amidotransferase class-I XBW1_1043 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain XBW1_1044 PF01113 Dihydrodipicolinate reductase, N-terminus XBW1_1044 PF05173 Dihydrodipicolinate reductase, C-terminus XBW1_1059 PF02401 LytB protein XBW1_1060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XBW1_1061 PF01252 Signal peptidase (SPase) II XBW1_1062 PF00133 tRNA synthetases class I (I, L, M and V) XBW1_1062 PF06827 Zinc finger found in FPG and IleRS XBW1_1062 PF08264 Anticodon-binding domain of tRNA XBW1_1063 PF06574 FAD synthetase XBW1_1063 PF01687 Riboflavin kinase XBW1_1065 PF01649 Ribosomal protein S20 XBW1_1066 PF03466 LysR substrate binding domain XBW1_1066 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_1067 PF06965 Na+/H+ antiporter 1 XBW1_1070 PF00684 DnaJ central domain XBW1_1070 PF00226 DnaJ domain XBW1_1070 PF01556 DnaJ C terminal domain XBW1_1071 PF00012 Hsp70 protein XBW1_1072 PF01184 GPR1/FUN34/yaaH family XBW1_1073 PF08946 Osmosensory transporter coiled coil XBW1_1073 PF00083 Sugar (and other) transporter XBW1_1081 PF02770 Acyl-CoA dehydrogenase, middle domain XBW1_1081 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XBW1_1081 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XBW1_1083 PF05199 GMC oxidoreductase XBW1_1083 PF00732 GMC oxidoreductase XBW1_1084 PF00550 Phosphopantetheine attachment site XBW1_1084 PF00668 Condensation domain XBW1_1084 PF13193 AMP-binding enzyme C-terminal domain XBW1_1084 PF00501 AMP-binding enzyme XBW1_1088 PF13610 DDE domain XBW1_1093 PF00994 Probable molybdopterin binding domain XBW1_1094 PF00923 Transaldolase/Fructose-6-phosphate aldolase XBW1_1095 PF03883 Peroxide stress protein YaaA XBW1_1096 PF00291 Pyridoxal-phosphate dependent enzyme XBW1_1096 PF14821 Threonine synthase N terminus XBW1_1097 PF00288 GHMP kinases N terminal domain XBW1_1097 PF08544 GHMP kinases C terminal XBW1_1098 PF03447 Homoserine dehydrogenase, NAD binding domain XBW1_1098 PF00742 Homoserine dehydrogenase XBW1_1098 PF13840 ACT domain XBW1_1098 PF01842 ACT domain XBW1_1098 PF00696 Amino acid kinase family XBW1_1099 PF00486 Transcriptional regulatory protein, C terminal XBW1_1099 PF00072 Response regulator receiver domain XBW1_1100 PF05981 CreA protein XBW1_1102 PF06445 GyrI-like small molecule binding domain XBW1_1102 PF12833 Helix-turn-helix domain XBW1_1103 PF00300 Histidine phosphatase superfamily (branch 1) XBW1_1104 PF01931 Protein of unknown function DUF84 XBW1_1105 PF01371 Trp repressor protein XBW1_1106 PF01464 Transglycosylase SLT domain XBW1_1106 PF14718 Soluble lytic murein transglycosylase L domain XBW1_1107 PF12848 ABC transporter XBW1_1107 PF00005 ABC transporter XBW1_1108 PF02687 FtsX-like permease family XBW1_1108 PF12704 MacB-like periplasmic core domain XBW1_1108 PF00005 ABC transporter XBW1_1109 PF01381 Helix-turn-helix XBW1_1109 PF13521 AAA domain XBW1_1110 PF18073 Rubredoxin metal binding domain XBW1_1111 PF18429 Domain of unknown function (DUF5609) XBW1_1112 PF10144 Bacterial virulence factor haemolysin XBW1_1115 PF01381 Helix-turn-helix XBW1_1118 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain XBW1_1118 PF02753 Pili assembly chaperone PapD, C-terminal domain XBW1_1119 PF13954 PapC N-terminal domain XBW1_1119 PF00577 Outer membrane usher protein XBW1_1119 PF13953 PapC C-terminal domain XBW1_1120 PF00419 Fimbrial protein XBW1_1121 PF01048 Phosphorylase superfamily XBW1_1122 PF01676 Metalloenzyme superfamily XBW1_1123 PF02885 Glycosyl transferase family, helical bundle domain XBW1_1123 PF00591 Glycosyl transferase family, a/b domain XBW1_1123 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain XBW1_1124 PF01791 DeoC/LacD family aldolase XBW1_1125 PF07662 Na+ dependent nucleoside transporter C-terminus XBW1_1125 PF07670 Nucleoside recognition XBW1_1125 PF01773 Na+ dependent nucleoside transporter N-terminus XBW1_1126 PF01026 TatD related DNase XBW1_1127 PF01734 Patatin-like phospholipase XBW1_1130 PF16658 Class II release factor RF3, C-terminal domain XBW1_1130 PF00009 Elongation factor Tu GTP binding domain XBW1_1130 PF03144 Elongation factor Tu domain 2 XBW1_1131 PF00583 Acetyltransferase (GNAT) family XBW1_1132 PF03603 DNA polymerase III psi subunit XBW1_1133 PF08468 Methyltransferase small domain N-terminal XBW1_1133 PF05175 Methyltransferase small domain XBW1_1134 PF07256 Protein of unknown function (DUF1435) XBW1_1135 PF00171 Aldehyde dehydrogenase family XBW1_1137 PF01266 FAD dependent oxidoreductase XBW1_1138 PF01156 Inosine-uridine preferring nucleoside hydrolase XBW1_1139 PF01381 Helix-turn-helix XBW1_1140 PF13693 Winged helix-turn-helix DNA-binding XBW1_1141 PF00893 Small Multidrug Resistance protein XBW1_1142 PF01132 Elongation factor P (EF-P) OB domain XBW1_1142 PF08207 Elongation factor P (EF-P) KOW-like domain XBW1_1142 PF09285 Elongation factor P, C-terminal XBW1_1143 PF04055 Radical SAM superfamily XBW1_1144 PF13698 Domain of unknown function (DUF4156) XBW1_1145 PF00118 TCP-1/cpn60 chaperonin family XBW1_1146 PF00166 Chaperonin 10 Kd subunit XBW1_1147 PF04186 FxsA cytoplasmic membrane protein XBW1_1148 PF00206 Lyase XBW1_1148 PF10415 Fumarase C C-terminus XBW1_1149 PF03605 Anaerobic c4-dicarboxylate membrane transporter XBW1_1150 PF02683 Cytochrome C biogenesis protein transmembrane region XBW1_1150 PF13098 Thioredoxin-like domain XBW1_1150 PF11412 Disulphide bond corrector protein DsbC XBW1_1153 PF00589 Phage integrase family XBW1_1157 PF06755 CbtA_toxin of type IV toxin-antitoxin system XBW1_1163 PF02371 Transposase IS116/IS110/IS902 family XBW1_1163 PF01548 Transposase XBW1_1166 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_1178 PF04717 Type VI secretion system, phage-baseplate injector XBW1_1180 PF03527 RHS protein XBW1_1180 PF05593 RHS Repeat XBW1_1183 PF11924 Inverse autotransporter, beta-domain XBW1_1183 PF07979 Intimin C-type lectin domain XBW1_1183 PF09134 Invasin, domain 3 XBW1_1183 PF02369 Bacterial Ig-like domain (group 1) XBW1_1204 PF13693 Winged helix-turn-helix DNA-binding XBW1_1206 PF13358 DDE superfamily endonuclease XBW1_1208 PF13592 Winged helix-turn helix XBW1_1208 PF13358 DDE superfamily endonuclease XBW1_1212 PF00436 Single-strand binding protein family XBW1_1215 PF01131 DNA topoisomerase XBW1_1215 PF01751 Toprim domain XBW1_1221 PF00772 DnaB-like helicase N terminal domain XBW1_1221 PF03796 DnaB-like helicase C terminal domain XBW1_1224 PF00589 Phage integrase family XBW1_1224 PF13356 Arm DNA-binding domain XBW1_1232 PF04717 Type VI secretion system, phage-baseplate injector XBW1_1235 PF13693 Winged helix-turn-helix DNA-binding XBW1_1236 PF00589 Phage integrase family XBW1_1236 PF02899 Phage integrase, N-terminal SAM-like domain XBW1_1241 PF06755 CbtA_toxin of type IV toxin-antitoxin system XBW1_1244 PF03230 Antirestriction protein XBW1_1247 PF01797 Transposase IS200 like XBW1_1252 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase XBW1_1265 PF04717 Type VI secretion system, phage-baseplate injector XBW1_1272 PF03400 IS1 transposase XBW1_1273 PF07979 Intimin C-type lectin domain XBW1_1273 PF09134 Invasin, domain 3 XBW1_1273 PF11924 Inverse autotransporter, beta-domain XBW1_1273 PF02369 Bacterial Ig-like domain (group 1) XBW1_1274 PF13358 DDE superfamily endonuclease XBW1_1297 PF13693 Winged helix-turn-helix DNA-binding XBW1_1301 PF00436 Single-strand binding protein family XBW1_1304 PF01131 DNA topoisomerase XBW1_1304 PF01751 Toprim domain XBW1_1310 PF03811 InsA N-terminal domain XBW1_1310 PF12759 InsA C-terminal domain XBW1_1328 PF01548 Transposase XBW1_1328 PF02371 Transposase IS116/IS110/IS902 family XBW1_1330 PF00004 ATPase family associated with various cellular activities (AAA) XBW1_1335 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_1341 PF02954 Bacterial regulatory protein, Fis family XBW1_1341 PF00158 Sigma-54 interaction domain XBW1_1341 PF00072 Response regulator receiver domain XBW1_1342 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XBW1_1342 PF00271 Helicase conserved C-terminal domain XBW1_1342 PF08463 EcoEI R protein C-terminal XBW1_1342 PF04851 Type III restriction enzyme, res subunit XBW1_1343 PF02646 RmuC family XBW1_1344 PF02384 N-6 DNA Methylase XBW1_1344 PF12161 HsdM N-terminal domain XBW1_1351 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase XBW1_1352 PF03230 Antirestriction protein XBW1_1355 PF06755 CbtA_toxin of type IV toxin-antitoxin system XBW1_1370 PF02525 Flavodoxin-like fold XBW1_1379 PF13693 Winged helix-turn-helix DNA-binding XBW1_1380 PF02463 RecF/RecN/SMC N terminal domain XBW1_1382 PF00436 Single-strand binding protein family XBW1_1386 PF01131 DNA topoisomerase XBW1_1386 PF01751 Toprim domain XBW1_1392 PF06755 CbtA_toxin of type IV toxin-antitoxin system XBW1_1395 PF03230 Antirestriction protein XBW1_1400 PF13358 DDE superfamily endonuclease XBW1_1402 PF13193 AMP-binding enzyme C-terminal domain XBW1_1402 PF00501 AMP-binding enzyme XBW1_1402 PF00668 Condensation domain XBW1_1402 PF00550 Phosphopantetheine attachment site XBW1_1403 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_1403 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_1403 PF00550 Phosphopantetheine attachment site XBW1_1403 PF16197 Ketoacyl-synthetase C-terminal extension XBW1_1403 PF00668 Condensation domain XBW1_1403 PF00698 Acyl transferase domain XBW1_1405 PF03797 Autotransporter beta-domain XBW1_1405 PF00082 Subtilase family XBW1_1405 PF12951 Passenger-associated-transport-repeat XBW1_1406 PF13358 DDE superfamily endonuclease XBW1_1409 PF07484 Phage Tail Collar Domain XBW1_1409 PF08400 Prophage tail fibre N-terminal XBW1_1409 PF03335 Phage tail fibre repeat XBW1_1410 PF00092 von Willebrand factor type A domain XBW1_1418 PF00005 ABC transporter XBW1_1420 PF03781 Sulfatase-modifying factor enzyme 1 XBW1_1429 PF01476 LysM domain XBW1_1429 PF01464 Transglycosylase SLT domain XBW1_1430 PF16123 Hydroxyacylglutathione hydrolase C-terminus XBW1_1430 PF00753 Metallo-beta-lactamase superfamily XBW1_1431 PF08241 Methyltransferase domain XBW1_1435 PF00075 RNase H XBW1_1436 PF00929 Exonuclease XBW1_1439 PF00456 Transketolase, thiamine diphosphate binding domain XBW1_1439 PF02779 Transketolase, pyrimidine binding domain XBW1_1439 PF02780 Transketolase, C-terminal domain XBW1_1440 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XBW1_1440 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XBW1_1441 PF00162 Phosphoglycerate kinase XBW1_1442 PF01116 Fructose-bisphosphate aldolase class-II XBW1_1445 PF03811 InsA N-terminal domain XBW1_1445 PF12759 InsA C-terminal domain XBW1_1450 PF13358 DDE superfamily endonuclease XBW1_1452 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal XBW1_1452 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal XBW1_1453 PF01613 Flavin reductase like domain XBW1_1454 PF00854 POT family XBW1_1455 PF07690 Major Facilitator Superfamily XBW1_1456 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XBW1_1456 PF07730 Histidine kinase XBW1_1456 PF05231 MASE1 XBW1_1457 PF00196 Bacterial regulatory proteins, luxR family XBW1_1457 PF00072 Response regulator receiver domain XBW1_1458 PF07690 Major Facilitator Superfamily XBW1_1460 PF03400 IS1 transposase XBW1_1461 PF12759 InsA C-terminal domain XBW1_1461 PF03811 InsA N-terminal domain XBW1_1462 PF04717 Type VI secretion system, phage-baseplate injector XBW1_1471 PF07690 Major Facilitator Superfamily XBW1_1472 PF03328 HpcH/HpaI aldolase/citrate lyase family XBW1_1473 PF01557 Fumarylacetoacetate (FAA) hydrolase family XBW1_1474 PF00171 Aldehyde dehydrogenase family XBW1_1475 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase XBW1_1476 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XBW1_1477 PF00171 Aldehyde dehydrogenase family XBW1_1478 PF01557 Fumarylacetoacetate (FAA) hydrolase family XBW1_1479 PF01557 Fumarylacetoacetate (FAA) hydrolase family XBW1_1480 PF01047 MarR family XBW1_1483 PF08242 Methyltransferase domain XBW1_1483 PF00501 AMP-binding enzyme XBW1_1483 PF00668 Condensation domain XBW1_1483 PF00550 Phosphopantetheine attachment site XBW1_1484 PF00550 Phosphopantetheine attachment site XBW1_1484 PF08242 Methyltransferase domain XBW1_1484 PF00668 Condensation domain XBW1_1484 PF00501 AMP-binding enzyme XBW1_1487 PF00975 Thioesterase domain XBW1_1489 PF00664 ABC transporter transmembrane region XBW1_1489 PF00005 ABC transporter XBW1_1489 PF04954 Siderophore-interacting protein XBW1_1489 PF08021 Siderophore-interacting FAD-binding domain XBW1_1490 PF00005 ABC transporter XBW1_1490 PF00664 ABC transporter transmembrane region XBW1_1492 PF13610 DDE domain XBW1_1495 PF01497 Periplasmic binding protein XBW1_1496 PF05977 Transmembrane secretion effector XBW1_1497 PF01032 FecCD transport family XBW1_1498 PF01032 FecCD transport family XBW1_1499 PF00005 ABC transporter XBW1_1500 PF00975 Thioesterase domain XBW1_1500 PF13193 AMP-binding enzyme C-terminal domain XBW1_1500 PF00550 Phosphopantetheine attachment site XBW1_1500 PF00668 Condensation domain XBW1_1500 PF00501 AMP-binding enzyme XBW1_1501 PF03621 MbtH-like protein XBW1_1502 PF00756 Putative esterase XBW1_1502 PF11806 Domain of unknown function (DUF3327) XBW1_1503 PF00593 TonB dependent receptor XBW1_1503 PF07715 TonB-dependent Receptor Plug Domain XBW1_1504 PF00425 chorismate binding enzyme XBW1_1505 PF13193 AMP-binding enzyme C-terminal domain XBW1_1505 PF00501 AMP-binding enzyme XBW1_1506 PF00550 Phosphopantetheine attachment site XBW1_1506 PF00857 Isochorismatase family XBW1_1508 PF07690 Major Facilitator Superfamily XBW1_1511 PF07690 Major Facilitator Superfamily XBW1_1515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XBW1_1515 PF00205 Thiamine pyrophosphate enzyme, central domain XBW1_1515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XBW1_1516 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XBW1_1516 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XBW1_1517 PF00474 Sodium:solute symporter family XBW1_1518 PF00294 pfkB family carbohydrate kinase XBW1_1519 PF01261 Xylose isomerase-like TIM barrel XBW1_1520 PF04962 KduI/IolB family XBW1_1525 PF00440 Bacterial regulatory proteins, tetR family XBW1_1525 PF16295 Tetracyclin repressor-like, C-terminal domain XBW1_1528 PF00668 Condensation domain XBW1_1528 PF00550 Phosphopantetheine attachment site XBW1_1528 PF13193 AMP-binding enzyme C-terminal domain XBW1_1528 PF00501 AMP-binding enzyme XBW1_1548 PF01797 Transposase IS200 like XBW1_1552 PF01588 Putative tRNA binding domain XBW1_1555 PF00288 GHMP kinases N terminal domain XBW1_1556 PF00155 Aminotransferase class I and II XBW1_1557 PF14824 Sirohaem biosynthesis protein central XBW1_1557 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XBW1_1557 PF10414 Sirohaem synthase dimerisation region XBW1_1558 PF07685 CobB/CobQ-like glutamine amidotransferase domain XBW1_1558 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XBW1_1559 PF03186 CobD/Cbib protein XBW1_1560 PF02570 Precorrin-8X methylmutase XBW1_1561 PF01888 CbiD XBW1_1562 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XBW1_1563 PF05175 Methyltransferase small domain XBW1_1564 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XBW1_1565 PF11760 Cobalamin synthesis G N-terminal XBW1_1565 PF11761 Cobalamin biosynthesis central region XBW1_1565 PF01890 Cobalamin synthesis G C-terminus XBW1_1566 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XBW1_1567 PF02571 Precorrin-6x reductase CbiJ/CobK XBW1_1568 PF06180 Cobalt chelatase (CbiK) XBW1_1569 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XBW1_1570 PF01891 Cobalt uptake substrate-specific transmembrane region XBW1_1571 PF02553 Cobalt transport protein component CbiN XBW1_1572 PF02361 Cobalt transport protein XBW1_1573 PF00005 ABC transporter XBW1_1574 PF07685 CobB/CobQ-like glutamine amidotransferase domain XBW1_1575 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase XBW1_1576 PF02654 Cobalamin-5-phosphate synthase XBW1_1577 PF00300 Histidine phosphatase superfamily (branch 1) XBW1_1578 PF02277 Phosphoribosyltransferase XBW1_1579 PF13193 AMP-binding enzyme C-terminal domain XBW1_1579 PF00501 AMP-binding enzyme XBW1_1581 PF02677 Epoxyqueuosine reductase QueH XBW1_1582 PF12833 Helix-turn-helix domain XBW1_1584 PF13302 Acetyltransferase (GNAT) domain XBW1_1585 PF16452 Bacteriophage CI repressor C-terminal domain XBW1_1585 PF07022 Bacteriophage CI repressor helix-turn-helix domain XBW1_1587 PF05840 Bacteriophage replication gene A protein (GPA) XBW1_1592 PF00959 Phage lysozyme XBW1_1598 PF03406 Phage tail fibre repeat XBW1_1601 PF07484 Phage Tail Collar Domain XBW1_1602 PF02413 Caudovirales tail fibre assembly protein, lambda gpK XBW1_1605 PF00535 Glycosyl transferase family 2 XBW1_1606 PF00535 Glycosyl transferase family 2 XBW1_1610 PF04984 Phage tail sheath protein subtilisin-like domain XBW1_1610 PF17482 Phage tail sheath C-terminal domain XBW1_1617 PF04325 Protein of unknown function (DUF465) XBW1_1618 PF03974 Ecotin XBW1_1619 PF00230 Major intrinsic protein XBW1_1620 PF00574 Clp protease XBW1_1622 PF02668 Taurine catabolism dioxygenase TauD, TfdA family XBW1_1626 PF01292 Prokaryotic cytochrome b561 XBW1_1627 PF13417 Glutathione S-transferase, N-terminal domain XBW1_1627 PF00043 Glutathione S-transferase, C-terminal domain XBW1_1628 PF00501 AMP-binding enzyme XBW1_1628 PF16177 Acetyl-coenzyme A synthetase N-terminus XBW1_1628 PF13193 AMP-binding enzyme C-terminal domain XBW1_1631 PF00285 Citrate synthase, C-terminal domain XBW1_1633 PF02954 Bacterial regulatory protein, Fis family XBW1_1633 PF00158 Sigma-54 interaction domain XBW1_1633 PF06506 Propionate catabolism activator XBW1_1637 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_1640 PF13592 Winged helix-turn helix XBW1_1640 PF13358 DDE superfamily endonuclease XBW1_1641 PF13808 DDE_Tnp_1-associated XBW1_1641 PF01609 Transposase DDE domain XBW1_1642 PF13356 Arm DNA-binding domain XBW1_1642 PF00589 Phage integrase family XBW1_1644 PF01668 SmpB protein XBW1_1645 PF03364 Polyketide cyclase / dehydrase and lipid transport XBW1_1646 PF03658 RnfH family Ubiquitin XBW1_1647 PF04355 SmpA / OmlA family XBW1_1648 PF02463 RecF/RecN/SMC N terminal domain XBW1_1649 PF01513 ATP-NAD kinase XBW1_1650 PF01025 GrpE XBW1_1651 PF03167 Uracil DNA glycosylase superfamily XBW1_1653 PF00270 DEAD/DEAH box helicase XBW1_1653 PF00271 Helicase conserved C-terminal domain XBW1_1659 PF07828 PA-IL-like protein XBW1_1664 PF12838 4Fe-4S dicluster domain XBW1_1665 PF01648 4'-phosphopantetheinyl transferase superfamily XBW1_1666 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ XBW1_1667 PF11967 Recombination protein O N terminal XBW1_1667 PF02565 Recombination protein O C terminal XBW1_1668 PF01926 50S ribosome-binding GTPase XBW1_1668 PF07650 KH domain XBW1_1669 PF00035 Double-stranded RNA binding motif XBW1_1669 PF14622 Ribonuclease-III-like XBW1_1670 PF10502 Signal peptidase, peptidase S26 XBW1_1671 PF03144 Elongation factor Tu domain 2 XBW1_1671 PF06421 GTP-binding protein LepA C-terminus XBW1_1671 PF00009 Elongation factor Tu GTP binding domain XBW1_1671 PF00679 Elongation factor G C-terminus XBW1_1673 PF03888 MucB/RseB N-terminal domain XBW1_1673 PF17188 MucB/RseB C-terminal domain XBW1_1674 PF03873 Anti sigma-E protein RseA, C-terminal domain XBW1_1674 PF03872 Anti sigma-E protein RseA, N-terminal domain XBW1_1675 PF08281 Sigma-70, region 4 XBW1_1675 PF04542 Sigma-70 region 2 XBW1_1676 PF05175 Methyltransferase small domain XBW1_1685 PF01797 Transposase IS200 like XBW1_1691 PF02413 Caudovirales tail fibre assembly protein, lambda gpK XBW1_1723 PF03245 Bacteriophage Rz lysis protein XBW1_1729 PF03589 Antitermination protein XBW1_1734 PF01381 Helix-turn-helix XBW1_1734 PF00717 Peptidase S24-like XBW1_1753 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain XBW1_1753 PF00730 HhH-GPD superfamily base excision DNA repair protein XBW1_1756 PF01966 HD domain XBW1_1757 PF14437 MafB19-like deaminase XBW1_1758 PF01797 Transposase IS200 like XBW1_1759 PF00497 Bacterial extracellular solute-binding proteins, family 3 XBW1_1759 PF01464 Transglycosylase SLT domain XBW1_1760 PF02769 AIR synthase related protein, C-terminal domain XBW1_1760 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain XBW1_1760 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal XBW1_1761 PF00512 His Kinase A (phospho-acceptor) domain XBW1_1761 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XBW1_1762 PF13942 YfhG lipoprotein XBW1_1763 PF00158 Sigma-54 interaction domain XBW1_1763 PF00072 Response regulator receiver domain XBW1_1764 PF02540 NAD synthase XBW1_1764 PF00795 Carbon-nitrogen hydrolase XBW1_1765 PF00543 Nitrogen regulatory protein P-II XBW1_1766 PF00175 Oxidoreductase NAD-binding domain XBW1_1766 PF00042 Globin XBW1_1766 PF00970 Oxidoreductase FAD-binding domain XBW1_1767 PF01609 Transposase DDE domain XBW1_1767 PF13808 DDE_Tnp_1-associated XBW1_1768 PF05638 Type VI secretion system effector, Hcp XBW1_1771 PF00464 Serine hydroxymethyltransferase XBW1_1772 PF12832 MFS_1 like family XBW1_1773 PF00459 Inositol monophosphatase family XBW1_1774 PF00588 SpoU rRNA Methylase family XBW1_1775 PF02082 Transcriptional regulator XBW1_1776 PF00266 Aminotransferase class-V XBW1_1777 PF01592 NifU-like N terminal domain XBW1_1778 PF01521 Iron-sulphur cluster biosynthesis XBW1_1779 PF07743 HSCB C-terminal oligomerisation domain XBW1_1780 PF00012 Hsp70 protein XBW1_1781 PF00111 2Fe-2S iron-sulfur cluster binding domain XBW1_1782 PF04384 Iron-sulphur cluster assembly XBW1_1783 PF00883 Cytosol aminopeptidase family, catalytic domain XBW1_1783 PF12404 Peptidase XBW1_1785 PF07678 A-macroglobulin TED domain XBW1_1785 PF01835 MG2 domain XBW1_1785 PF00207 Alpha-2-macroglobulin family XBW1_1785 PF07703 Alpha-2-macroglobulin bait region domain XBW1_1785 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain XBW1_1785 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain XBW1_1785 PF11974 Bacterial alpha-2-macroglobulin MG3 domain XBW1_1785 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain XBW1_1785 PF17962 Bacterial macroglobulin domain 6 XBW1_1786 PF00905 Penicillin binding protein transpeptidase domain XBW1_1786 PF00912 Transglycosylase XBW1_1786 PF06832 Penicillin-Binding Protein C-terminus Family XBW1_1788 PF13443 Cro/C1-type HTH DNA-binding domain XBW1_1790 PF00334 Nucleoside diphosphate kinase XBW1_1791 PF04055 Radical SAM superfamily XBW1_1794 PF13464 Domain of unknown function (DUF4115) XBW1_1795 PF04551 GcpE protein XBW1_1796 PF03129 Anticodon binding domain XBW1_1796 PF13393 Histidyl-tRNA synthetase XBW1_1797 PF09976 Tetratricopeptide repeat-like domain XBW1_1798 PF13360 PQQ-like domain XBW1_1799 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal XBW1_1799 PF01926 50S ribosome-binding GTPase XBW1_1801 PF01797 Transposase IS200 like XBW1_1802 PF01447 Thermolysin metallopeptidase, catalytic domain XBW1_1802 PF02868 Thermolysin metallopeptidase, alpha-helical domain XBW1_1802 PF16485 Protealysin propeptide XBW1_1803 PF01218 Coproporphyrinogen III oxidase XBW1_1804 PF00583 Acetyltransferase (GNAT) family XBW1_1806 PF06572 Protein of unknown function (DUF1131) XBW1_1808 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_1809 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_1810 PF00005 ABC transporter XBW1_1811 PF00291 Pyridoxal-phosphate dependent enzyme XBW1_1812 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 XBW1_1813 PF02896 PEP-utilising enzyme, TIM barrel domain XBW1_1813 PF05524 PEP-utilising enzyme, N-terminal XBW1_1813 PF00391 PEP-utilising enzyme, mobile domain XBW1_1814 PF00381 PTS HPr component phosphorylation site XBW1_1816 PF00291 Pyridoxal-phosphate dependent enzyme XBW1_1818 PF04354 ZipA, C-terminal FtsZ-binding domain XBW1_1819 PF00533 BRCA1 C Terminus (BRCT) domain XBW1_1819 PF03119 NAD-dependent DNA ligase C4 zinc finger domain XBW1_1819 PF01653 NAD-dependent DNA ligase adenylation domain XBW1_1819 PF12826 Helix-hairpin-helix motif XBW1_1819 PF03120 NAD-dependent DNA ligase OB-fold domain XBW1_1820 PF01773 Na+ dependent nucleoside transporter N-terminus XBW1_1820 PF07670 Nucleoside recognition XBW1_1820 PF07662 Na+ dependent nucleoside transporter C-terminus XBW1_1821 PF12843 Putative quorum-sensing-regulated virulence factor XBW1_1822 PF00749 tRNA synthetases class I (E and Q), catalytic domain XBW1_1824 PF03692 Putative zinc- or iron-chelating domain XBW1_1828 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XBW1_1832 PF00589 Phage integrase family XBW1_1832 PF13356 Arm DNA-binding domain XBW1_1832 PF14659 Phage integrase, N-terminal SAM-like domain XBW1_1833 PF14659 Phage integrase, N-terminal SAM-like domain XBW1_1833 PF00589 Phage integrase family XBW1_1833 PF13356 Arm DNA-binding domain XBW1_1838 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system XBW1_1854 PF07484 Phage Tail Collar Domain XBW1_1855 PF04333 MlaA lipoprotein XBW1_1856 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) XBW1_1858 PF00108 Thiolase, N-terminal domain XBW1_1858 PF02803 Thiolase, C-terminal domain XBW1_1859 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XBW1_1859 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XBW1_1859 PF00378 Enoyl-CoA hydratase/isomerase XBW1_1860 PF00300 Histidine phosphatase superfamily (branch 1) XBW1_1862 PF14659 Phage integrase, N-terminal SAM-like domain XBW1_1862 PF00589 Phage integrase family XBW1_1862 PF13356 Arm DNA-binding domain XBW1_1875 PF13808 DDE_Tnp_1-associated XBW1_1875 PF01609 Transposase DDE domain XBW1_1876 PF03589 Antitermination protein XBW1_1882 PF01336 OB-fold nucleic acid binding domain XBW1_1882 PF00152 tRNA synthetases class II (D, K and N) XBW1_1887 PF01266 FAD dependent oxidoreductase XBW1_1889 PF13358 DDE superfamily endonuclease XBW1_1889 PF13592 Winged helix-turn helix XBW1_1890 PF01609 Transposase DDE domain XBW1_1890 PF13808 DDE_Tnp_1-associated XBW1_1892 PF03811 InsA N-terminal domain XBW1_1892 PF12759 InsA C-terminal domain XBW1_1893 PF03400 IS1 transposase XBW1_1895 PF00550 Phosphopantetheine attachment site XBW1_1895 PF00668 Condensation domain XBW1_1895 PF13193 AMP-binding enzyme C-terminal domain XBW1_1895 PF00501 AMP-binding enzyme XBW1_1896 PF00550 Phosphopantetheine attachment site XBW1_1896 PF00975 Thioesterase domain XBW1_1896 PF00501 AMP-binding enzyme XBW1_1896 PF13193 AMP-binding enzyme C-terminal domain XBW1_1896 PF00668 Condensation domain XBW1_1897 PF00668 Condensation domain XBW1_1897 PF00550 Phosphopantetheine attachment site XBW1_1897 PF00975 Thioesterase domain XBW1_1897 PF00501 AMP-binding enzyme XBW1_1897 PF13193 AMP-binding enzyme C-terminal domain XBW1_1898 PF00664 ABC transporter transmembrane region XBW1_1898 PF00005 ABC transporter XBW1_1899 PF02525 Flavodoxin-like fold XBW1_1900 PF12833 Helix-turn-helix domain XBW1_1900 PF06719 AraC-type transcriptional regulator N-terminus XBW1_1902 PF06071 Protein of unknown function (DUF933) XBW1_1902 PF01926 50S ribosome-binding GTPase XBW1_1903 PF01195 Peptidyl-tRNA hydrolase XBW1_1905 PF10762 Protein of unknown function (DUF2583) XBW1_1906 PF03797 Autotransporter beta-domain XBW1_1906 PF00657 GDSL-like Lipase/Acylhydrolase XBW1_1907 PF14572 Phosphoribosyl synthetase-associated domain XBW1_1907 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase XBW1_1908 PF08544 GHMP kinases C terminal XBW1_1908 PF00288 GHMP kinases N terminal domain XBW1_1909 PF03550 Outer membrane lipoprotein LolB XBW1_1910 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain XBW1_1910 PF01488 Shikimate / quinate 5-dehydrogenase XBW1_1910 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain XBW1_1911 PF03462 PCRF domain XBW1_1911 PF00472 RF-1 domain XBW1_1912 PF13847 Methyltransferase domain XBW1_1912 PF17827 PrmC N-terminal domain XBW1_1913 PF13369 Transglutaminase-like superfamily XBW1_1914 PF00793 DAHP synthetase I family XBW1_1915 PF00916 Sulfate permease family XBW1_1915 PF01740 STAS domain XBW1_1917 PF00782 Dual specificity phosphatase, catalytic domain XBW1_1918 PF12146 Serine aminopeptidase, S33 XBW1_1918 PF12147 Putative methyltransferase XBW1_1919 PF01066 CDP-alcohol phosphatidyltransferase XBW1_1920 PF08279 HTH domain XBW1_1920 PF13280 WYL domain XBW1_1921 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XBW1_1923 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XBW1_1924 PF02613 Nitrate reductase delta subunit XBW1_1925 PF07273 Protein of unknown function (DUF1439) XBW1_1926 PF07690 Major Facilitator Superfamily XBW1_1927 PF13302 Acetyltransferase (GNAT) domain XBW1_1928 PF03023 Lipid II flippase MurJ XBW1_1929 PF01797 Transposase IS200 like XBW1_1931 PF05746 DALR anticodon binding domain XBW1_1931 PF03485 Arginyl tRNA synthetase N terminal domain XBW1_1931 PF00750 tRNA synthetases class I (R) XBW1_1933 PF06185 YecM protein XBW1_1934 PF03932 CutC family XBW1_1936 PF08003 Protein of unknown function (DUF1698) XBW1_1937 PF13649 Methyltransferase domain XBW1_1938 PF01124 MAPEG family XBW1_1939 PF00152 tRNA synthetases class II (D, K and N) XBW1_1939 PF02938 GAD domain XBW1_1939 PF01336 OB-fold nucleic acid binding domain XBW1_1940 PF00293 NUDIX domain XBW1_1941 PF01709 Transcriptional regulator XBW1_1942 PF02075 Crossover junction endodeoxyribonuclease RuvC XBW1_1943 PF01330 RuvA N terminal domain XBW1_1943 PF07499 RuvA, C-terminal domain XBW1_1944 PF17864 RuvB AAA lid domain XBW1_1944 PF05491 RuvB C-terminal winged helix domain XBW1_1944 PF05496 Holliday junction DNA helicase RuvB P-loop domain XBW1_1946 PF02661 Fic/DOC family XBW1_1947 PF00950 ABC 3 transport family XBW1_1948 PF00005 ABC transporter XBW1_1949 PF01297 Zinc-uptake complex component A periplasmic XBW1_1950 PF01551 Peptidase family M23 XBW1_1950 PF08525 Opacity-associated protein A N-terminal motif XBW1_1950 PF01476 LysM domain XBW1_1951 PF03279 Bacterial lipid A biosynthesis acyltransferase XBW1_1952 PF02887 Pyruvate kinase, alpha/beta domain XBW1_1952 PF00224 Pyruvate kinase, barrel domain XBW1_1953 PF01380 SIS domain XBW1_1953 PF01418 Helix-turn-helix domain, rpiR family XBW1_1954 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XBW1_1954 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XBW1_1955 PF00893 Small Multidrug Resistance protein XBW1_1956 PF00893 Small Multidrug Resistance protein XBW1_1957 PF01042 Endoribonuclease L-PSP XBW1_1958 PF04851 Type III restriction enzyme, res subunit XBW1_1958 PF13307 Helicase C-terminal domain XBW1_1959 PF00814 Glycoprotease family XBW1_1960 PF03843 Outer membrane lipoprotein Slp family XBW1_1961 PF13193 AMP-binding enzyme C-terminal domain XBW1_1961 PF00501 AMP-binding enzyme XBW1_1963 PF01612 3'-5' exonuclease XBW1_1963 PF00570 HRDC domain XBW1_1968 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_1981 PF06530 Phage antitermination protein Q XBW1_1990 PF14431 YwqJ-like deaminase XBW1_1990 PF18807 Tripartite Tc toxins repeat XBW1_1999 PF03922 OmpW family XBW1_2000 PF01244 Membrane dipeptidase (Peptidase family M19) XBW1_2003 PF00290 Tryptophan synthase alpha chain XBW1_2004 PF00291 Pyridoxal-phosphate dependent enzyme XBW1_2005 PF00218 Indole-3-glycerol phosphate synthase XBW1_2005 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase XBW1_2006 PF00591 Glycosyl transferase family, a/b domain XBW1_2006 PF02885 Glycosyl transferase family, helical bundle domain XBW1_2007 PF00117 Glutamine amidotransferase class-I XBW1_2008 PF00425 chorismate binding enzyme XBW1_2008 PF04715 Anthranilate synthase component I, N terminal region XBW1_2009 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_2012 PF13358 DDE superfamily endonuclease XBW1_2015 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_2018 PF01797 Transposase IS200 like XBW1_2022 PF02811 PHP domain XBW1_2023 PF01300 Telomere recombination XBW1_2024 PF00849 RNA pseudouridylate synthase XBW1_2024 PF01479 S4 domain XBW1_2025 PF12557 Cob(I)alamin adenosyltransferase N terminal XBW1_2025 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP XBW1_2026 PF00106 short chain dehydrogenase XBW1_2027 PF01343 Peptidase family S49 XBW1_2027 PF08496 Peptidase family S49 N-terminal XBW1_2029 PF10692 Protein of unknown function (DUF2498) XBW1_2031 PF08272 Topoisomerase I zinc-ribbon-like XBW1_2031 PF01131 DNA topoisomerase XBW1_2031 PF01751 Toprim domain XBW1_2031 PF01396 Topoisomerase DNA binding C4 zinc finger XBW1_2032 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_2032 PF03466 LysR substrate binding domain XBW1_2034 PF00694 Aconitase C-terminal domain XBW1_2034 PF00330 Aconitase family (aconitate hydratase) XBW1_2035 PF00925 GTP cyclohydrolase II XBW1_2036 PF06305 Lipopolysaccharide assembly protein A domain XBW1_2037 PF18073 Rubredoxin metal binding domain XBW1_2038 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family XBW1_2039 PF01253 Translation initiation factor SUI1 XBW1_2040 PF13358 DDE superfamily endonuclease XBW1_2040 PF13592 Winged helix-turn helix XBW1_2044 PF07883 Cupin domain XBW1_2048 PF00682 HMGL-like XBW1_2051 PF08206 Ribonuclease B OB domain XBW1_2051 PF00575 S1 RNA binding domain XBW1_2051 PF00773 RNB domain XBW1_2051 PF17876 Cold shock domain XBW1_2052 PF00730 HhH-GPD superfamily base excision DNA repair protein XBW1_2052 PF00633 Helix-hairpin-helix motif XBW1_2052 PF10576 Iron-sulfur binding domain of endonuclease III XBW1_2053 PF02508 Rnf-Nqr subunit, membrane protein XBW1_2054 PF04205 FMN-binding domain XBW1_2055 PF03116 NQR2, RnfD, RnfE family XBW1_2056 PF10531 SLBB domain XBW1_2056 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit XBW1_2056 PF13237 4Fe-4S dicluster domain XBW1_2056 PF13375 RnfC Barrel sandwich hybrid domain XBW1_2057 PF04060 Putative Fe-S cluster XBW1_2058 PF02508 Rnf-Nqr subunit, membrane protein XBW1_2059 PF10754 Protein of unknown function (DUF2569) XBW1_2060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XBW1_2060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XBW1_2061 PF13593 SBF-like CPA transporter family (DUF4137) XBW1_2062 PF00962 Adenosine/AMP deaminase XBW1_2063 PF06097 Bacterial protein of unknown function (DUF945) XBW1_2064 PF01238 Phosphomannose isomerase type I XBW1_2065 PF10415 Fumarase C C-terminus XBW1_2065 PF00206 Lyase XBW1_2066 PF05472 DNA replication terminus site-binding protein (Ter protein) XBW1_2068 PF07690 Major Facilitator Superfamily XBW1_2069 PF03466 LysR substrate binding domain XBW1_2069 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_2070 PF00480 ROK family XBW1_2074 PF06932 Protein of unknown function (DUF1283) XBW1_2076 PF00106 short chain dehydrogenase XBW1_2077 PF01636 Phosphotransferase enzyme family XBW1_2080 PF13673 Acetyltransferase (GNAT) domain XBW1_2080 PF04229 GrpB protein XBW1_2082 PF13358 DDE superfamily endonuclease XBW1_2082 PF13592 Winged helix-turn helix XBW1_2092 PF03958 Bacterial type II/III secretion system short domain XBW1_2092 PF00263 Bacterial type II and III secretion system protein XBW1_2098 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_2098 PF03466 LysR substrate binding domain XBW1_2099 PF07690 Major Facilitator Superfamily XBW1_2101 PF00892 EamA-like transporter family XBW1_2106 PF00202 Aminotransferase class-III XBW1_2108 PF07715 TonB-dependent Receptor Plug Domain XBW1_2108 PF00593 TonB dependent receptor XBW1_2109 PF01047 MarR family XBW1_2115 PF07690 Major Facilitator Superfamily XBW1_2117 PF03797 Autotransporter beta-domain XBW1_2117 PF12951 Passenger-associated-transport-repeat XBW1_2117 PF00082 Subtilase family XBW1_2121 PF01494 FAD binding domain XBW1_2122 PF14497 Glutathione S-transferase, C-terminal domain XBW1_2122 PF02798 Glutathione S-transferase, N-terminal domain XBW1_2127 PF07690 Major Facilitator Superfamily XBW1_2128 PF03466 LysR substrate binding domain XBW1_2128 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_2129 PF07690 Major Facilitator Superfamily XBW1_2133 PF00027 Cyclic nucleotide-binding domain XBW1_2133 PF00325 Bacterial regulatory proteins, crp family XBW1_2134 PF00582 Universal stress protein family XBW1_2135 PF00589 Phage integrase family XBW1_2135 PF02899 Phage integrase, N-terminal SAM-like domain XBW1_2136 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain XBW1_2136 PF18413 Neuraminidase-like domain XBW1_2141 PF13358 DDE superfamily endonuclease XBW1_2143 PF13808 DDE_Tnp_1-associated XBW1_2143 PF01609 Transposase DDE domain XBW1_2147 PF18413 Neuraminidase-like domain XBW1_2147 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain XBW1_2151 PF02233 NAD(P) transhydrogenase beta subunit XBW1_2152 PF05222 Alanine dehydrogenase/PNT, N-terminal domain XBW1_2152 PF01262 Alanine dehydrogenase/PNT, C-terminal domain XBW1_2152 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch XBW1_2153 PF07338 Protein of unknown function (DUF1471) XBW1_2155 PF13520 Amino acid permease XBW1_2158 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain XBW1_2158 PF02753 Pili assembly chaperone PapD, C-terminal domain XBW1_2159 PF13954 PapC N-terminal domain XBW1_2159 PF00577 Outer membrane usher protein XBW1_2159 PF13953 PapC C-terminal domain XBW1_2161 PF00501 AMP-binding enzyme XBW1_2161 PF13193 AMP-binding enzyme C-terminal domain XBW1_2161 PF00550 Phosphopantetheine attachment site XBW1_2161 PF00668 Condensation domain XBW1_2162 PF00501 AMP-binding enzyme XBW1_2162 PF13193 AMP-binding enzyme C-terminal domain XBW1_2162 PF00668 Condensation domain XBW1_2162 PF00550 Phosphopantetheine attachment site XBW1_2163 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold XBW1_2163 PF11898 Domain of unknown function (DUF3418) XBW1_2163 PF00270 DEAD/DEAH box helicase XBW1_2163 PF04408 Helicase associated domain (HA2) XBW1_2163 PF00271 Helicase conserved C-terminal domain XBW1_2164 PF02525 Flavodoxin-like fold XBW1_2165 PF07027 Protein of unknown function (DUF1318) XBW1_2167 PF01609 Transposase DDE domain XBW1_2167 PF13808 DDE_Tnp_1-associated XBW1_2168 PF11739 Dicarboxylate transport XBW1_2169 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XBW1_2169 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XBW1_2174 PF13358 DDE superfamily endonuclease XBW1_2176 PF03692 Putative zinc- or iron-chelating domain XBW1_2177 PF01557 Fumarylacetoacetate (FAA) hydrolase family XBW1_2178 PF13406 Transglycosylase SLT domain XBW1_2179 PF05166 YcgL domain XBW1_2180 PF05209 Septum formation inhibitor MinC, N-terminal domain XBW1_2180 PF03775 Septum formation inhibitor MinC, C-terminal domain XBW1_2181 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XBW1_2182 PF03776 Septum formation topological specificity factor MinE XBW1_2184 PF13808 DDE_Tnp_1-associated XBW1_2184 PF01609 Transposase DDE domain XBW1_2189 PF02413 Caudovirales tail fibre assembly protein, lambda gpK XBW1_2190 PF03406 Phage tail fibre repeat XBW1_2196 PF13610 DDE domain XBW1_2197 PF00704 Glycosyl hydrolases family 18 XBW1_2200 PF13610 DDE domain XBW1_2202 PF16671 Actin cross-linking domain XBW1_2202 PF12146 Serine aminopeptidase, S33 XBW1_2202 PF07634 RtxA repeat XBW1_2202 PF11647 Membrane Localization Domain XBW1_2202 PF11713 Peptidase C80 family XBW1_2207 PF01740 STAS domain XBW1_2207 PF00916 Sulfate permease family XBW1_2209 PF04279 Intracellular septation protein A XBW1_2210 PF03061 Thioesterase superfamily XBW1_2211 PF03544 Gram-negative bacterial TonB protein C-terminal XBW1_2213 PF13396 Phospholipase_D-nuclease N-terminal XBW1_2213 PF13091 PLD-like domain XBW1_2214 PF04269 Protein of unknown function, DUF440 XBW1_2215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XBW1_2215 PF00005 ABC transporter XBW1_2216 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XBW1_2216 PF00005 ABC transporter XBW1_2217 PF12911 N-terminal TM domain of oligopeptide transport permease C XBW1_2217 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_2218 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_2219 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XBW1_2220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XBW1_2222 PF01914 MarC family integral membrane protein XBW1_2223 PF00171 Aldehyde dehydrogenase family XBW1_2223 PF00465 Iron-containing alcohol dehydrogenase XBW1_2224 PF00265 Thymidine kinase XBW1_2225 PF00816 H-NS histone family XBW1_2226 PF01370 NAD dependent epimerase/dehydratase family XBW1_2227 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XBW1_2227 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XBW1_2227 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XBW1_2228 PF00483 Nucleotidyl transferase XBW1_2229 PF00072 Response regulator receiver domain XBW1_2230 PF02810 SEC-C motif XBW1_2231 PF01842 ACT domain XBW1_2231 PF00551 Formyl transferase XBW1_2235 PF03372 Endonuclease/Exonuclease/phosphatase family XBW1_2236 PF01751 Toprim domain XBW1_2236 PF01131 DNA topoisomerase XBW1_2237 PF02769 AIR synthase related protein, C-terminal domain XBW1_2237 PF00586 AIR synthase related protein, N-terminal domain XBW1_2238 PF00881 Nitroreductase family XBW1_2239 PF01343 Peptidase family S49 XBW1_2240 PF17763 Glutaminase/Asparaginase C-terminal domain XBW1_2240 PF00710 Asparaginase, N-terminal XBW1_2241 PF00857 Isochorismatase family XBW1_2242 PF07023 Protein of unknown function (DUF1315) XBW1_2243 PF01641 SelR domain XBW1_2244 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XBW1_2244 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XBW1_2245 PF01263 Aldose 1-epimerase XBW1_2246 PF06629 MltA-interacting protein MipA XBW1_2247 PF01168 Alanine racemase, N-terminal domain XBW1_2247 PF00842 Alanine racemase, C-terminal domain XBW1_2248 PF01266 FAD dependent oxidoreductase XBW1_2249 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_2250 PF07840 FadR C-terminal domain XBW1_2250 PF00392 Bacterial regulatory proteins, gntR family XBW1_2251 PF06450 Bacterial Na+/H+ antiporter B (NhaB) XBW1_2252 PF02600 Disulfide bond formation protein DsbB XBW1_2257 PF02413 Caudovirales tail fibre assembly protein, lambda gpK XBW1_2258 PF02371 Transposase IS116/IS110/IS902 family XBW1_2258 PF01548 Transposase XBW1_2259 PF01548 Transposase XBW1_2259 PF02371 Transposase IS116/IS110/IS902 family XBW1_2267 PF04717 Type VI secretion system, phage-baseplate injector XBW1_2274 PF13358 DDE superfamily endonuclease XBW1_2275 PF03811 InsA N-terminal domain XBW1_2275 PF12759 InsA C-terminal domain XBW1_2276 PF03400 IS1 transposase XBW1_2280 PF00392 Bacterial regulatory proteins, gntR family XBW1_2280 PF00155 Aminotransferase class I and II XBW1_2281 PF01654 Cytochrome bd terminal oxidase subunit I XBW1_2282 PF02322 Cytochrome bd terminal oxidase subunit II XBW1_2284 PF07730 Histidine kinase XBW1_2284 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term XBW1_2284 PF00672 HAMP domain XBW1_2284 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XBW1_2285 PF02562 PhoH-like protein XBW1_2286 PF04231 Endonuclease I XBW1_2287 PF00582 Universal stress protein family XBW1_2288 PF00582 Universal stress protein family XBW1_2289 PF01773 Na+ dependent nucleoside transporter N-terminus XBW1_2289 PF07662 Na+ dependent nucleoside transporter C-terminus XBW1_2290 PF04227 Indigoidine synthase A like protein XBW1_2291 PF00294 pfkB family carbohydrate kinase XBW1_2293 PF13520 Amino acid permease XBW1_2294 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain XBW1_2294 PF01276 Orn/Lys/Arg decarboxylase, major domain XBW1_2294 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain XBW1_2295 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XBW1_2295 PF02805 Metal binding domain of Ada XBW1_2295 PF12833 Helix-turn-helix domain XBW1_2295 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XBW1_2296 PF07859 alpha/beta hydrolase fold XBW1_2299 PF00975 Thioesterase domain XBW1_2301 PF13610 DDE domain XBW1_2312 PF05638 Type VI secretion system effector, Hcp XBW1_2323 PF13358 DDE superfamily endonuclease XBW1_2328 PF01797 Transposase IS200 like XBW1_2335 PF13505 Outer membrane protein beta-barrel domain XBW1_2341 PF12759 InsA C-terminal domain XBW1_2341 PF03811 InsA N-terminal domain XBW1_2342 PF03400 IS1 transposase XBW1_2344 PF13419 Haloacid dehalogenase-like hydrolase XBW1_2345 PF04307 LexA-binding, inner membrane-associated putative hydrolase XBW1_2347 PF01435 Peptidase family M48 XBW1_2348 PF17804 Tail specific protease N-terminal domain XBW1_2348 PF00595 PDZ domain XBW1_2348 PF03572 Peptidase family S41 XBW1_2348 PF11818 C-terminal domain of tail specific protease (DUF3340) XBW1_2349 PF04352 ProQ/FINO family XBW1_2349 PF17516 ProQ C-terminal domain XBW1_2350 PF13185 GAF domain XBW1_2352 PF10709 Protein of unknown function (DUF2511) XBW1_2353 PF05425 Copper resistance protein D XBW1_2354 PF04234 CopC domain XBW1_2355 PF00210 Ferritin-like domain XBW1_2356 PF06440 DNA polymerase III, theta subunit XBW1_2357 PF00561 alpha/beta hydrolase fold XBW1_2358 PF13995 YebF-like protein XBW1_2359 PF03701 Uncharacterised protein family (UPF0181) XBW1_2360 PF04715 Anthranilate synthase component I, N terminal region XBW1_2360 PF00425 chorismate binding enzyme XBW1_2361 PF00293 NUDIX domain XBW1_2362 PF03315 Serine dehydratase beta chain XBW1_2362 PF03313 Serine dehydratase alpha chain XBW1_2363 PF03830 PTS system sorbose subfamily IIB component XBW1_2363 PF03610 PTS system fructose IIA component XBW1_2364 PF03609 PTS system sorbose-specific iic component XBW1_2365 PF03613 PTS system mannose/fructose/sorbose family IID component XBW1_2366 PF06173 Protein of unknown function (DUF986) XBW1_2367 PF02659 Putative manganese efflux pump XBW1_2368 PF13847 Methyltransferase domain XBW1_2374 PF00958 GMP synthase C terminal domain XBW1_2374 PF00117 Glutamine amidotransferase class-I XBW1_2374 PF02540 NAD synthase XBW1_2375 PF00571 CBS domain XBW1_2375 PF00478 IMP dehydrogenase / GMP reductase domain XBW1_2376 PF13742 OB-fold nucleic acid binding domain XBW1_2376 PF02601 Exonuclease VII, large subunit XBW1_2377 PF00593 TonB dependent receptor XBW1_2377 PF07715 TonB-dependent Receptor Plug Domain XBW1_2378 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XBW1_2378 PF00326 Prolyl oligopeptidase family XBW1_2381 PF03949 Malic enzyme, NAD binding domain XBW1_2381 PF00390 Malic enzyme, N-terminal domain XBW1_2381 PF01515 Phosphate acetyl/butaryl transferase XBW1_2383 PF00072 Response regulator receiver domain XBW1_2383 PF00196 Bacterial regulatory proteins, luxR family XBW1_2384 PF03960 ArsC family XBW1_2385 PF01546 Peptidase family M20/M25/M40 XBW1_2385 PF07687 Peptidase dimerisation domain XBW1_2386 PF02557 D-alanyl-D-alanine carboxypeptidase XBW1_2387 PF13980 Uncharacterised protein family (UPF0370) XBW1_2388 PF17176 tRNA-binding domain XBW1_2388 PF05127 Helicase XBW1_2388 PF13718 GNAT acetyltransferase 2 XBW1_2388 PF08351 Domain of unknown function (DUF1726) XBW1_2389 PF04284 Protein of unknown function (DUF441) XBW1_2392 PF01259 SAICAR synthetase XBW1_2393 PF06804 NlpB/DapX lipoprotein XBW1_2394 PF00701 Dihydrodipicolinate synthetase family XBW1_2395 PF01842 ACT domain XBW1_2396 PF00578 AhpC/TSA family XBW1_2397 PF01594 AI-2E family transporter XBW1_2398 PF01435 Peptidase family M48 XBW1_2398 PF07720 Tetratricopeptide repeat XBW1_2399 PF03960 ArsC family XBW1_2400 PF00308 Bacterial dnaA protein XBW1_2401 PF00860 Permease family XBW1_2403 PF02769 AIR synthase related protein, C-terminal domain XBW1_2403 PF00586 AIR synthase related protein, N-terminal domain XBW1_2404 PF00551 Formyl transferase XBW1_2405 PF13302 Acetyltransferase (GNAT) domain XBW1_2406 PF13089 Polyphosphate kinase N-terminal domain XBW1_2406 PF17941 Polyphosphate kinase C-terminal domain 1 XBW1_2406 PF13090 Polyphosphate kinase C-terminal domain 2 XBW1_2406 PF02503 Polyphosphate kinase middle domain XBW1_2407 PF02541 Ppx/GppA phosphatase family XBW1_2408 PF01769 Divalent cation transporter XBW1_2408 PF00571 CBS domain XBW1_2408 PF03448 MgtE intracellular N domain XBW1_2410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XBW1_2411 PF00873 AcrB/AcrD/AcrF family XBW1_2412 PF00873 AcrB/AcrD/AcrF family XBW1_2413 PF00672 HAMP domain XBW1_2413 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XBW1_2413 PF00512 His Kinase A (phospho-acceptor) domain XBW1_2414 PF00072 Response regulator receiver domain XBW1_2414 PF00486 Transcriptional regulatory protein, C terminal XBW1_2417 PF01791 DeoC/LacD family aldolase XBW1_2418 PF08543 Phosphomethylpyrimidine kinase XBW1_2421 PF00589 Phage integrase family XBW1_2421 PF13356 Arm DNA-binding domain XBW1_2423 PF18273 Type III R-M EcoP15I C-terminal domain XBW1_2423 PF01555 DNA methylase XBW1_2424 PF08774 VRR-NUC domain XBW1_2424 PF04851 Type III restriction enzyme, res subunit XBW1_2428 PF13358 DDE superfamily endonuclease XBW1_2428 PF13592 Winged helix-turn helix XBW1_2435 PF01797 Transposase IS200 like XBW1_2436 PF00313 'Cold-shock' DNA-binding domain XBW1_2437 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP XBW1_2438 PF00324 Amino acid permease XBW1_2440 PF12833 Helix-turn-helix domain XBW1_2441 PF01510 N-acetylmuramoyl-L-alanine amidase XBW1_2442 PF01235 Sodium:alanine symporter family XBW1_2450 PF13358 DDE superfamily endonuclease XBW1_2451 PF00180 Isocitrate/isopropylmalate dehydrogenase XBW1_2453 PF03222 Tryptophan/tyrosine permease family XBW1_2457 PF00180 Isocitrate/isopropylmalate dehydrogenase XBW1_2458 PF00849 RNA pseudouridylate synthase XBW1_2459 PF00293 NUDIX domain XBW1_2461 PF04356 Protein of unknown function (DUF489) XBW1_2462 PF00206 Lyase XBW1_2462 PF08328 Adenylosuccinate lyase C-terminal XBW1_2464 PF00486 Transcriptional regulatory protein, C terminal XBW1_2464 PF00072 Response regulator receiver domain XBW1_2465 PF08918 PhoQ Sensor XBW1_2465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XBW1_2466 PF08007 Cupin superfamily protein XBW1_2467 PF01546 Peptidase family M20/M25/M40 XBW1_2467 PF07687 Peptidase dimerisation domain XBW1_2468 PF02146 Sir2 family XBW1_2469 PF02687 FtsX-like permease family XBW1_2469 PF12704 MacB-like periplasmic core domain XBW1_2470 PF00005 ABC transporter XBW1_2471 PF12704 MacB-like periplasmic core domain XBW1_2471 PF02687 FtsX-like permease family XBW1_2473 PF02559 CarD-like/TRCF domain XBW1_2473 PF00270 DEAD/DEAH box helicase XBW1_2473 PF17757 UvrB interaction domain XBW1_2473 PF00271 Helicase conserved C-terminal domain XBW1_2473 PF03461 TRCF domain XBW1_2476 PF13358 DDE superfamily endonuclease XBW1_2477 PF07992 Pyridine nucleotide-disulphide oxidoreductase XBW1_2478 PF00933 Glycosyl hydrolase family 3 N terminal domain XBW1_2479 PF01636 Phosphotransferase enzyme family XBW1_2480 PF13036 Peptidoglycan-synthase activator LpoB XBW1_2481 PF01230 HIT domain XBW1_2482 PF01026 TatD related DNase XBW1_2483 PF09115 DNA polymerase III, delta subunit, C terminal XBW1_2484 PF02223 Thymidylate kinase XBW1_2485 PF02618 YceG-like family XBW1_2486 PF01063 Amino-transferase class IV XBW1_2487 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_2487 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_2488 PF00550 Phosphopantetheine attachment site XBW1_2490 PF00698 Acyl transferase domain XBW1_2491 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XBW1_2491 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XBW1_2492 PF02504 Fatty acid synthesis protein XBW1_2493 PF01783 Ribosomal L32p protein family XBW1_2494 PF02620 Large ribosomal RNA subunit accumulation protein YceD XBW1_2495 PF02545 Maf-like protein XBW1_2496 PF00849 RNA pseudouridylate synthase XBW1_2496 PF01479 S4 domain XBW1_2497 PF00575 S1 RNA binding domain XBW1_2497 PF10150 Ribonuclease E/G family XBW1_2497 PF12111 Polyribonucleotide phosphorylase C terminal XBW1_2499 PF01797 Transposase IS200 like XBW1_2501 PF04363 Protein of unknown function (DUF496) XBW1_2502 PF00929 Exonuclease XBW1_2502 PF08411 Exonuclease C-terminal XBW1_2504 PF09330 D-lactate dehydrogenase, membrane binding XBW1_2504 PF01565 FAD binding domain XBW1_2505 PF13520 Amino acid permease XBW1_2506 PF07715 TonB-dependent Receptor Plug Domain XBW1_2506 PF00593 TonB dependent receptor XBW1_2507 PF00005 ABC transporter XBW1_2508 PF01032 FecCD transport family XBW1_2510 PF00324 Amino acid permease XBW1_2511 PF03466 LysR substrate binding domain XBW1_2511 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_2512 PF03601 Conserved hypothetical protein 698 XBW1_2513 PF01261 Xylose isomerase-like TIM barrel XBW1_2514 PF00294 pfkB family carbohydrate kinase XBW1_2515 PF00293 NUDIX domain XBW1_2516 PF03222 Tryptophan/tyrosine permease family XBW1_2517 PF01132 Elongation factor P (EF-P) OB domain XBW1_2517 PF09285 Elongation factor P, C-terminal XBW1_2517 PF08207 Elongation factor P (EF-P) KOW-like domain XBW1_2520 PF01569 PAP2 superfamily XBW1_2521 PF00877 NlpC/P60 family XBW1_2522 PF13989 YejG-like protein XBW1_2524 PF07690 Major Facilitator Superfamily XBW1_2525 PF01479 S4 domain XBW1_2525 PF00849 RNA pseudouridylate synthase XBW1_2526 PF04851 Type III restriction enzyme, res subunit XBW1_2526 PF00271 Helicase conserved C-terminal domain XBW1_2527 PF01386 Ribosomal L25p family XBW1_2528 PF04245 37-kD nucleoid-associated bacterial protein XBW1_2529 PF07208 Protein of unknown function (DUF1414) XBW1_2530 PF00884 Sulfatase XBW1_2530 PF11893 Domain of unknown function (DUF3413) XBW1_2535 PF13808 DDE_Tnp_1-associated XBW1_2535 PF01609 Transposase DDE domain XBW1_2538 PF13358 DDE superfamily endonuclease XBW1_2546 PF02369 Bacterial Ig-like domain (group 1) XBW1_2546 PF11924 Inverse autotransporter, beta-domain XBW1_2546 PF07979 Intimin C-type lectin domain XBW1_2546 PF09134 Invasin, domain 3 XBW1_2552 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XBW1_2552 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XBW1_2555 PF16197 Ketoacyl-synthetase C-terminal extension XBW1_2555 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_2555 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_2555 PF00698 Acyl transferase domain XBW1_2555 PF00550 Phosphopantetheine attachment site XBW1_2555 PF00668 Condensation domain XBW1_2556 PF00501 AMP-binding enzyme XBW1_2556 PF13193 AMP-binding enzyme C-terminal domain XBW1_2556 PF00668 Condensation domain XBW1_2556 PF00550 Phosphopantetheine attachment site XBW1_2557 PF13193 AMP-binding enzyme C-terminal domain XBW1_2557 PF00501 AMP-binding enzyme XBW1_2557 PF00550 Phosphopantetheine attachment site XBW1_2557 PF00668 Condensation domain XBW1_2558 PF00005 ABC transporter XBW1_2559 PF00698 Acyl transferase domain XBW1_2559 PF14765 Polyketide synthase dehydratase XBW1_2559 PF00550 Phosphopantetheine attachment site XBW1_2559 PF08659 KR domain XBW1_2559 PF08240 Alcohol dehydrogenase GroES-like domain XBW1_2559 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_2559 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_2559 PF16197 Ketoacyl-synthetase C-terminal extension XBW1_2560 PF13193 AMP-binding enzyme C-terminal domain XBW1_2560 PF00668 Condensation domain XBW1_2560 PF00550 Phosphopantetheine attachment site XBW1_2560 PF00501 AMP-binding enzyme XBW1_2561 PF00698 Acyl transferase domain XBW1_2562 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_2562 PF13193 AMP-binding enzyme C-terminal domain XBW1_2562 PF00550 Phosphopantetheine attachment site XBW1_2562 PF16197 Ketoacyl-synthetase C-terminal extension XBW1_2562 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_2562 PF00202 Aminotransferase class-III XBW1_2562 PF00501 AMP-binding enzyme XBW1_2562 PF00668 Condensation domain XBW1_2563 PF13193 AMP-binding enzyme C-terminal domain XBW1_2563 PF00501 AMP-binding enzyme XBW1_2563 PF00975 Thioesterase domain XBW1_2563 PF00550 Phosphopantetheine attachment site XBW1_2563 PF00668 Condensation domain XBW1_2564 PF02770 Acyl-CoA dehydrogenase, middle domain XBW1_2564 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XBW1_2564 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XBW1_2565 PF00550 Phosphopantetheine attachment site XBW1_2568 PF00589 Phage integrase family XBW1_2568 PF12167 Arm DNA-binding domain XBW1_2569 PF01797 Transposase IS200 like XBW1_2570 PF02049 Flagellar hook-basal body complex protein FliE XBW1_2571 PF01514 Secretory protein of YscJ/FliF family XBW1_2571 PF08345 Flagellar M-ring protein C-terminal XBW1_2572 PF14842 FliG N-terminal domain XBW1_2572 PF01706 FliG C-terminal domain XBW1_2572 PF14841 FliG middle domain XBW1_2573 PF02108 Flagellar assembly protein FliH XBW1_2574 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XBW1_2574 PF18269 T3SS EscN ATPase C-terminal domain XBW1_2575 PF02050 Flagellar FliJ protein XBW1_2576 PF02120 Flagellar hook-length control protein FliK XBW1_2578 PF03748 Flagellar basal body-associated protein FliL XBW1_2579 PF02154 Flagellar motor switch protein FliM XBW1_2579 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XBW1_2580 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XBW1_2580 PF16973 Flagellar motor switch protein FliN N-terminal XBW1_2581 PF04347 Flagellar biosynthesis protein, FliO XBW1_2582 PF00813 FliP family XBW1_2583 PF01313 Bacterial export proteins, family 3 XBW1_2584 PF01311 Bacterial export proteins, family 1 XBW1_2590 PF01609 Transposase DDE domain XBW1_2590 PF13808 DDE_Tnp_1-associated XBW1_2599 PF00669 Bacterial flagellin N-terminal helical region XBW1_2600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XBW1_2600 PF00460 Flagella basal body rod protein XBW1_2601 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase XBW1_2601 PF10135 Rod binding protein XBW1_2602 PF02119 Flagellar P-ring protein XBW1_2604 PF02107 Flagellar L-ring protein XBW1_2605 PF00460 Flagella basal body rod protein XBW1_2605 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XBW1_2606 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XBW1_2606 PF00460 Flagella basal body rod protein XBW1_2607 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XBW1_2607 PF00460 Flagella basal body rod protein XBW1_2607 PF07559 Flagellar basal body protein FlaE XBW1_2608 PF03963 Flagellar hook capping protein - N-terminal region XBW1_2608 PF13860 FlgD Ig-like domain XBW1_2608 PF13861 FlgD Tudor-like domain XBW1_2609 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XBW1_2609 PF00460 Flagella basal body rod protein XBW1_2610 PF00460 Flagella basal body rod protein XBW1_2611 PF17656 FlgA N-terminal domain XBW1_2611 PF13144 Chaperone for flagella basal body P-ring formation XBW1_2612 PF04316 Anti-sigma-28 factor, FlgM XBW1_2613 PF05130 FlgN protein XBW1_2614 PF00419 Fimbrial protein XBW1_2615 PF13954 PapC N-terminal domain XBW1_2615 PF00577 Outer membrane usher protein XBW1_2615 PF13953 PapC C-terminal domain XBW1_2616 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain XBW1_2616 PF02753 Pili assembly chaperone PapD, C-terminal domain XBW1_2619 PF03400 IS1 transposase XBW1_2620 PF12759 InsA C-terminal domain XBW1_2620 PF03811 InsA N-terminal domain XBW1_2622 PF00771 FHIPEP family XBW1_2623 PF01312 FlhB HrpN YscU SpaS Family XBW1_2629 PF01235 Sodium:alanine symporter family XBW1_2630 PF00239 Resolvase, N terminal domain XBW1_2630 PF02796 Helix-turn-helix domain of resolvase XBW1_2632 PF18807 Tripartite Tc toxins repeat XBW1_2632 PF14431 YwqJ-like deaminase XBW1_2643 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_2644 PF13356 Arm DNA-binding domain XBW1_2644 PF00589 Phage integrase family XBW1_2645 PF00589 Phage integrase family XBW1_2645 PF13356 Arm DNA-binding domain XBW1_2651 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_2653 PF04344 Chemotaxis phosphatase, CheZ XBW1_2654 PF00072 Response regulator receiver domain XBW1_2655 PF01339 CheB methylesterase XBW1_2655 PF00072 Response regulator receiver domain XBW1_2656 PF03705 CheR methyltransferase, all-alpha domain XBW1_2656 PF01739 CheR methyltransferase, SAM binding domain XBW1_2657 PF00672 HAMP domain XBW1_2657 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XBW1_2657 PF02203 Tar ligand binding domain homologue XBW1_2658 PF00672 HAMP domain XBW1_2658 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XBW1_2658 PF02203 Tar ligand binding domain homologue XBW1_2659 PF01584 CheW-like domain XBW1_2660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XBW1_2660 PF01584 CheW-like domain XBW1_2660 PF09078 CheY binding XBW1_2660 PF01627 Hpt domain XBW1_2660 PF02895 Signal transducing histidine kinase, homodimeric domain XBW1_2661 PF00691 OmpA family XBW1_2661 PF13677 Membrane MotB of proton-channel complex MotA/MotB XBW1_2662 PF01618 MotA/TolQ/ExbB proton channel family XBW1_2663 PF05280 Flagellar transcriptional activator (FlhC) XBW1_2664 PF05247 Flagellar transcriptional activator (FlhD) XBW1_2671 PF02308 MgtC family XBW1_2673 PF00313 'Cold-shock' DNA-binding domain XBW1_2675 PF10777 Inner membrane protein YlaC XBW1_2683 PF01979 Amidohydrolase family XBW1_2684 PF13991 BssS protein family XBW1_2685 PF00196 Bacterial regulatory proteins, luxR family XBW1_2687 PF03279 Bacterial lipid A biosynthesis acyltransferase XBW1_2688 PF00854 POT family XBW1_2711 PF03354 Phage Terminase XBW1_2715 PF02567 Phenazine biosynthesis-like protein XBW1_2717 PF01070 FMN-dependent dehydrogenase XBW1_2718 PF02652 L-lactate permease XBW1_2719 PF03466 LysR substrate binding domain XBW1_2719 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_2721 PF06821 Serine hydrolase XBW1_2723 PF01797 Transposase IS200 like XBW1_2728 PF01381 Helix-turn-helix XBW1_2728 PF00717 Peptidase S24-like XBW1_2733 PF00313 'Cold-shock' DNA-binding domain XBW1_2734 PF00158 Sigma-54 interaction domain XBW1_2734 PF01590 GAF domain XBW1_2736 PF00795 Carbon-nitrogen hydrolase XBW1_2739 PF00586 AIR synthase related protein, N-terminal domain XBW1_2739 PF02769 AIR synthase related protein, C-terminal domain XBW1_2742 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading XBW1_2742 PF18416 N-acetylglucosamine binding protein domain 2 XBW1_2743 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XBW1_2756 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_2758 PF00111 2Fe-2S iron-sulfur cluster binding domain XBW1_2759 PF00268 Ribonucleotide reductase, small chain XBW1_2761 PF03477 ATP cone domain XBW1_2761 PF02867 Ribonucleotide reductase, barrel domain XBW1_2761 PF00317 Ribonucleotide reductase, all-alpha domain XBW1_2763 PF03989 DNA gyrase C-terminal domain, beta-propeller XBW1_2763 PF00521 DNA gyrase/topoisomerase IV, subunit A XBW1_2765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XBW1_2765 PF00512 His Kinase A (phospho-acceptor) domain XBW1_2765 PF09456 RcsC Alpha-Beta-Loop (ABL) XBW1_2765 PF00072 Response regulator receiver domain XBW1_2766 PF00196 Bacterial regulatory proteins, luxR family XBW1_2766 PF00072 Response regulator receiver domain XBW1_2767 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XBW1_2767 PF16359 RcsD-ABL domain XBW1_2767 PF01627 Hpt domain XBW1_2769 PF03222 Tryptophan/tyrosine permease family XBW1_2770 PF07437 YfaZ precursor XBW1_2771 PF00501 AMP-binding enzyme XBW1_2771 PF13193 AMP-binding enzyme C-terminal domain XBW1_2772 PF13378 Enolase C-terminal domain-like XBW1_2773 PF00378 Enoyl-CoA hydratase/isomerase XBW1_2774 PF12697 Alpha/beta hydrolase family XBW1_2775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XBW1_2775 PF16582 Middle domain of thiamine pyrophosphate XBW1_2775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XBW1_2779 PF13808 DDE_Tnp_1-associated XBW1_2779 PF01609 Transposase DDE domain XBW1_2781 PF02753 Pili assembly chaperone PapD, C-terminal domain XBW1_2781 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain XBW1_2782 PF03400 IS1 transposase XBW1_2783 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_2784 PF03811 InsA N-terminal domain XBW1_2784 PF12759 InsA C-terminal domain XBW1_2786 PF02413 Caudovirales tail fibre assembly protein, lambda gpK XBW1_2787 PF05675 Protein of unknown function (DUF817) XBW1_2789 PF00459 Inositol monophosphatase family XBW1_2790 PF00849 RNA pseudouridylate synthase XBW1_2790 PF01479 S4 domain XBW1_2798 PF03354 Phage Terminase XBW1_2802 PF03245 Bacteriophage Rz lysis protein XBW1_2810 PF06530 Phage antitermination protein Q XBW1_2824 PF13356 Arm DNA-binding domain XBW1_2824 PF00589 Phage integrase family XBW1_2826 PF02413 Caudovirales tail fibre assembly protein, lambda gpK XBW1_2853 PF10668 Phage terminase small subunit XBW1_2853 PF03592 Terminase small subunit XBW1_2866 PF13443 Cro/C1-type HTH DNA-binding domain XBW1_2866 PF00717 Peptidase S24-like XBW1_2884 PF01066 CDP-alcohol phosphatidyltransferase XBW1_2885 PF01541 GIY-YIG catalytic domain XBW1_2885 PF02151 UvrB/uvrC motif XBW1_2885 PF08459 UvrC Helix-hairpin-helix N-terminal XBW1_2886 PF00196 Bacterial regulatory proteins, luxR family XBW1_2886 PF00072 Response regulator receiver domain XBW1_2890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XBW1_2890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XBW1_2893 PF01609 Transposase DDE domain XBW1_2893 PF13808 DDE_Tnp_1-associated XBW1_2896 PF03811 InsA N-terminal domain XBW1_2896 PF12759 InsA C-terminal domain XBW1_2897 PF03400 IS1 transposase XBW1_2899 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_2899 PF03466 LysR substrate binding domain XBW1_2902 PF00324 Amino acid permease XBW1_2903 PF13358 DDE superfamily endonuclease XBW1_2903 PF13592 Winged helix-turn helix XBW1_2909 PF02413 Caudovirales tail fibre assembly protein, lambda gpK XBW1_2911 PF00474 Sodium:solute symporter family XBW1_2912 PF14850 DNA-binding domain of Proline dehydrogenase XBW1_2912 PF18327 Proline utilization A proline dehydrogenase N-terminal domain XBW1_2912 PF01619 Proline dehydrogenase XBW1_2912 PF00171 Aldehyde dehydrogenase family XBW1_2913 PF02899 Phage integrase, N-terminal SAM-like domain XBW1_2914 PF04542 Sigma-70 region 2 XBW1_2914 PF04539 Sigma-70 region 3 XBW1_2914 PF04545 Sigma-70, region 4 XBW1_2915 PF00700 Bacterial flagellin C-terminal helical region XBW1_2915 PF00669 Bacterial flagellin N-terminal helical region XBW1_2916 PF07195 Flagellar hook-associated protein 2 C-terminus XBW1_2916 PF07196 Flagellin hook IN motif XBW1_2916 PF02465 Flagellar hook-associated protein 2 N-terminus XBW1_2917 PF02561 Flagellar protein FliS XBW1_2918 PF05400 Flagellar protein FliT XBW1_2922 PF00501 AMP-binding enzyme XBW1_2922 PF00668 Condensation domain XBW1_2922 PF00550 Phosphopantetheine attachment site XBW1_2922 PF13193 AMP-binding enzyme C-terminal domain XBW1_2923 PF08241 Methyltransferase domain XBW1_2923 PF00501 AMP-binding enzyme XBW1_2923 PF00668 Condensation domain XBW1_2923 PF13193 AMP-binding enzyme C-terminal domain XBW1_2923 PF00550 Phosphopantetheine attachment site XBW1_2923 PF00975 Thioesterase domain XBW1_2923 PF00391 PEP-utilising enzyme, mobile domain XBW1_2939 PF01609 Transposase DDE domain XBW1_2939 PF13808 DDE_Tnp_1-associated XBW1_2945 PF00893 Small Multidrug Resistance protein XBW1_2946 PF01171 PP-loop family XBW1_2947 PF01544 CorA-like Mg2+ transporter protein XBW1_2948 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XBW1_2950 PF08534 Redoxin XBW1_2952 PF18024 Helix-turn-helix domain XBW1_2952 PF00158 Sigma-54 interaction domain XBW1_2954 PF05128 Domain of unknown function (DUF697) XBW1_2955 PF04317 YcjX-like family, DUF463 XBW1_2956 PF04024 PspC domain XBW1_2957 PF06667 Phage shock protein B XBW1_2958 PF04012 PspA/IM30 family XBW1_2959 PF00158 Sigma-54 interaction domain XBW1_2959 PF02954 Bacterial regulatory protein, Fis family XBW1_2960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XBW1_2961 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_2962 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_2962 PF12911 N-terminal TM domain of oligopeptide transport permease C XBW1_2963 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XBW1_2963 PF00005 ABC transporter XBW1_2964 PF00005 ABC transporter XBW1_2966 PF02798 Glutathione S-transferase, N-terminal domain XBW1_2966 PF00043 Glutathione S-transferase, C-terminal domain XBW1_2967 PF08543 Phosphomethylpyrimidine kinase XBW1_2968 PF01479 S4 domain XBW1_2968 PF00579 tRNA synthetases class I (W and Y) XBW1_2969 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region XBW1_2969 PF01243 Pyridoxamine 5'-phosphate oxidase XBW1_2970 PF03702 Anhydro-N-acetylmuramic acid kinase XBW1_2971 PF05433 Glycine zipper 2TM domain XBW1_2972 PF01047 MarR family XBW1_2974 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XBW1_2975 PF00929 Exonuclease XBW1_2976 PF00462 Glutaredoxin XBW1_2977 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XBW1_2977 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XBW1_2978 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_2979 PF00356 Bacterial regulatory proteins, lacI family XBW1_2980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_2980 PF03466 LysR substrate binding domain XBW1_2981 PF07690 Major Facilitator Superfamily XBW1_2984 PF00677 Lumazine binding domain XBW1_2985 PF01554 MatE XBW1_2986 PF02887 Pyruvate kinase, alpha/beta domain XBW1_2986 PF00224 Pyruvate kinase, barrel domain XBW1_2987 PF04728 Lipoprotein leucine-zipper XBW1_2988 PF03734 L,D-transpeptidase catalytic domain XBW1_2988 PF01476 LysM domain XBW1_2988 PF17969 L,D-transpeptidase C-terminal domain XBW1_2989 PF03061 Thioesterase superfamily XBW1_2990 PF01565 FAD binding domain XBW1_2990 PF13183 4Fe-4S dicluster domain XBW1_2990 PF02913 FAD linked oxidases, C-terminal domain XBW1_2991 PF01594 AI-2E family transporter XBW1_2993 PF00391 PEP-utilising enzyme, mobile domain XBW1_2993 PF02896 PEP-utilising enzyme, TIM barrel domain XBW1_2993 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain XBW1_2994 PF03618 Kinase/pyrophosphorylase XBW1_2995 PF00793 DAHP synthetase I family XBW1_2996 PF00593 TonB dependent receptor XBW1_2996 PF07715 TonB-dependent Receptor Plug Domain XBW1_2997 PF05171 Haemin-degrading HemS.ChuX domain XBW1_2998 PF01497 Periplasmic binding protein XBW1_2999 PF01032 FecCD transport family XBW1_3000 PF00005 ABC transporter XBW1_3002 PF12833 Helix-turn-helix domain XBW1_3003 PF10437 Bacterial lipoate protein ligase C-terminus XBW1_3003 PF03099 Biotin/lipoate A/B protein ligase family XBW1_3004 PF00877 NlpC/P60 family XBW1_3006 PF00892 EamA-like transporter family XBW1_3008 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase XBW1_3009 PF01522 Polysaccharide deacetylase XBW1_3010 PF00551 Formyl transferase XBW1_3010 PF02911 Formyl transferase, C-terminal domain XBW1_3010 PF01370 NAD dependent epimerase/dehydratase family XBW1_3011 PF00535 Glycosyl transferase family 2 XBW1_3012 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XBW1_3013 PF00005 ABC transporter XBW1_3014 PF01032 FecCD transport family XBW1_3015 PF00216 Bacterial DNA-binding protein XBW1_3016 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain XBW1_3016 PF03483 B3/4 domain XBW1_3016 PF03484 tRNA synthetase B5 domain XBW1_3016 PF03147 Ferredoxin-fold anticodon binding domain XBW1_3016 PF01588 Putative tRNA binding domain XBW1_3017 PF01409 tRNA synthetases class II core domain (F) XBW1_3017 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain XBW1_3018 PF00453 Ribosomal protein L20 XBW1_3019 PF01632 Ribosomal protein L35 XBW1_3020 PF00707 Translation initiation factor IF-3, C-terminal domain XBW1_3020 PF05198 Translation initiation factor IF-3, N-terminal domain XBW1_3021 PF02824 TGS domain XBW1_3021 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XBW1_3021 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XBW1_3021 PF03129 Anticodon binding domain XBW1_3042 PF03245 Bacteriophage Rz lysis protein XBW1_3049 PF03589 Antitermination protein XBW1_3057 PF00772 DnaB-like helicase N terminal domain XBW1_3057 PF03796 DnaB-like helicase C terminal domain XBW1_3061 PF01381 Helix-turn-helix XBW1_3061 PF00717 Peptidase S24-like XBW1_3090 PF01464 Transglycosylase SLT domain XBW1_3092 PF01297 Zinc-uptake complex component A periplasmic XBW1_3093 PF00005 ABC transporter XBW1_3094 PF00950 ABC 3 transport family XBW1_3095 PF00950 ABC 3 transport family XBW1_3097 PF14002 YniB-like protein XBW1_3100 PF07484 Phage Tail Collar Domain XBW1_3101 PF02413 Caudovirales tail fibre assembly protein, lambda gpK XBW1_3102 PF08400 Prophage tail fibre N-terminal XBW1_3102 PF07484 Phage Tail Collar Domain XBW1_3102 PF03335 Phage tail fibre repeat XBW1_3108 PF13358 DDE superfamily endonuclease XBW1_3110 PF00072 Response regulator receiver domain XBW1_3110 PF00486 Transcriptional regulatory protein, C terminal XBW1_3111 PF00512 His Kinase A (phospho-acceptor) domain XBW1_3111 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XBW1_3111 PF08521 Two-component sensor kinase N-terminal XBW1_3113 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XBW1_3113 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XBW1_3113 PF11890 Domain of unknown function (DUF3410) XBW1_3114 PF01118 Semialdehyde dehydrogenase, NAD binding domain XBW1_3114 PF02774 Semialdehyde dehydrogenase, dimerisation domain XBW1_3115 PF01416 tRNA pseudouridine synthase XBW1_3116 PF09335 SNARE associated Golgi protein XBW1_3117 PF01039 Carboxyl transferase domain XBW1_3117 PF17848 Acetyl-coA carboxylase zinc finger domain XBW1_3118 PF08245 Mur ligase middle domain XBW1_3118 PF02875 Mur ligase family, glutamate ligase domain XBW1_3119 PF05036 Sporulation related domain XBW1_3120 PF02674 Colicin V production protein XBW1_3121 PF00156 Phosphoribosyl transferase domain XBW1_3122 PF02441 Flavoprotein XBW1_3123 PF01370 NAD dependent epimerase/dehydratase family XBW1_3123 PF08338 Domain of unknown function (DUF1731) XBW1_3124 PF02798 Glutathione S-transferase, N-terminal domain XBW1_3124 PF00043 Glutathione S-transferase, C-terminal domain XBW1_3125 PF00293 NUDIX domain XBW1_3127 PF08990 Erythronolide synthase docking XBW1_3127 PF16197 Ketoacyl-synthetase C-terminal extension XBW1_3127 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_3127 PF00550 Phosphopantetheine attachment site XBW1_3127 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_3127 PF00698 Acyl transferase domain XBW1_3127 PF08659 KR domain XBW1_3128 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_3128 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_3129 PF00698 Acyl transferase domain XBW1_3129 PF03060 Nitronate monooxygenase XBW1_3132 PF00795 Carbon-nitrogen hydrolase XBW1_3133 PF00501 AMP-binding enzyme XBW1_3133 PF13193 AMP-binding enzyme C-terminal domain XBW1_3133 PF00668 Condensation domain XBW1_3133 PF07993 Male sterility protein XBW1_3133 PF00550 Phosphopantetheine attachment site XBW1_3134 PF00005 ABC transporter XBW1_3141 PF00202 Aminotransferase class-III XBW1_3142 PF04958 Arginine N-succinyltransferase beta subunit XBW1_3143 PF00171 Aldehyde dehydrogenase family XBW1_3144 PF04996 Succinylarginine dihydrolase XBW1_3145 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family XBW1_3146 PF00324 Amino acid permease XBW1_3147 PF01515 Phosphate acetyl/butaryl transferase XBW1_3147 PF07085 DRTGG domain XBW1_3149 PF00871 Acetokinase family XBW1_3150 PF04217 Protein of unknown function, DUF412 XBW1_3151 PF03887 YfbU domain XBW1_3152 PF13419 Haloacid dehalogenase-like hydrolase XBW1_3153 PF02080 TrkA-C domain XBW1_3153 PF03600 Citrate transporter XBW1_3156 PF00155 Aminotransferase class I and II XBW1_3158 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_3158 PF03466 LysR substrate binding domain XBW1_3160 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 XBW1_3161 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit XBW1_3162 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit XBW1_3162 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit XBW1_3164 PF10531 SLBB domain XBW1_3164 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit XBW1_3164 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XBW1_3165 PF01568 Molydopterin dinucleotide binding domain XBW1_3165 PF00384 Molybdopterin oxidoreductase XBW1_3165 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XBW1_3165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XBW1_3166 PF00146 NADH dehydrogenase XBW1_3167 PF12838 4Fe-4S dicluster domain XBW1_3168 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 XBW1_3169 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XBW1_3170 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XBW1_3170 PF00361 Proton-conducting membrane transporter XBW1_3171 PF00361 Proton-conducting membrane transporter XBW1_3172 PF00361 Proton-conducting membrane transporter XBW1_3176 PF01609 Transposase DDE domain XBW1_3176 PF13808 DDE_Tnp_1-associated XBW1_3179 PF01970 Tripartite tricarboxylate transporter TctA family XBW1_3180 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_3180 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_3181 PF01266 FAD dependent oxidoreductase XBW1_3181 PF05430 S-adenosyl-L-methionine-dependent methyltransferase XBW1_3182 PF00583 Acetyltransferase (GNAT) family XBW1_3185 PF08891 YfcL protein XBW1_3186 PF04315 Elongation factor P hydroxylase XBW1_3187 PF01925 Sulfite exporter TauE/SafE XBW1_3188 PF01264 Chorismate synthase XBW1_3189 PF05175 Methyltransferase small domain XBW1_3190 PF00324 Amino acid permease XBW1_3191 PF00221 Aromatic amino acid lyase XBW1_3192 PF01175 Urocanase Rossmann-like domain XBW1_3192 PF17392 Urocanase C-terminal domain XBW1_3192 PF17391 Urocanase N-terminal domain XBW1_3193 PF00392 Bacterial regulatory proteins, gntR family XBW1_3193 PF07702 UTRA domain XBW1_3194 PF00491 Arginase family XBW1_3195 PF01979 Amidohydrolase family XBW1_3197 PF01713 Smr domain XBW1_3201 PF01797 Transposase IS200 like XBW1_3218 PF00574 Clp protease XBW1_3219 PF04860 Phage portal protein XBW1_3228 PF03245 Bacteriophage Rz lysis protein XBW1_3236 PF06530 Phage antitermination protein Q XBW1_3250 PF13356 Arm DNA-binding domain XBW1_3250 PF00589 Phage integrase family XBW1_3251 PF04358 DsrC like protein XBW1_3252 PF00708 Acylphosphatase XBW1_3253 PF08755 Hemimethylated DNA-binding protein YccV like XBW1_3254 PF13380 CoA binding domain XBW1_3255 PF00580 UvrD/REP helicase N-terminal domain XBW1_3255 PF13361 UvrD-like helicase C-terminal domain XBW1_3255 PF12462 DNA helicase IV / RNA helicase N terminal XBW1_3256 PF12805 FUSC-like inner membrane protein yccS XBW1_3257 PF00550 Phosphopantetheine attachment site XBW1_3257 PF00501 AMP-binding enzyme XBW1_3257 PF13193 AMP-binding enzyme C-terminal domain XBW1_3257 PF00668 Condensation domain XBW1_3261 PF00083 Sugar (and other) transporter XBW1_3261 PF07690 Major Facilitator Superfamily XBW1_3264 PF04994 TfoX C-terminal domain XBW1_3264 PF04993 TfoX N-terminal domain XBW1_3265 PF03846 Cell division inhibitor SulA XBW1_3266 PF01389 OmpA-like transmembrane domain XBW1_3266 PF00691 OmpA family XBW1_3267 PF17414 MatP C-terminal ribbon-helix-helix domain XBW1_3267 PF06303 MatP N-terminal domain XBW1_3268 PF05362 Lon protease (S16) C-terminal proteolytic domain XBW1_3268 PF13654 AAA domain XBW1_3269 PF07977 FabA-like domain XBW1_3270 PF03886 ABC-type transport auxiliary lipoprotein component XBW1_3271 PF02470 MlaD protein XBW1_3272 PF04403 Paraquat-inducible protein A XBW1_3273 PF00005 ABC transporter XBW1_3273 PF16326 ABC transporter C-terminal domain XBW1_3273 PF12848 ABC transporter XBW1_3274 PF10672 S-adenosylmethionine-dependent methyltransferase XBW1_3274 PF01170 Putative RNA methylase family UPF0020 XBW1_3274 PF02926 THUMP domain XBW1_3276 PF00111 2Fe-2S iron-sulfur cluster binding domain XBW1_3276 PF03476 MOSC N-terminal beta barrel domain XBW1_3276 PF03473 MOSC domain XBW1_3277 PF07126 Cell-division protein ZapC XBW1_3278 PF01180 Dihydroorotate dehydrogenase XBW1_3279 PF11940 Domain of unknown function (DUF3458) Ig-like fold XBW1_3279 PF01433 Peptidase family M1 domain XBW1_3279 PF17432 Domain of unknown function (DUF3458_C) ARM repeats XBW1_3281 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family XBW1_3281 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain XBW1_3282 PF00152 tRNA synthetases class II (D, K and N) XBW1_3282 PF01336 OB-fold nucleic acid binding domain XBW1_3283 PF00267 Gram-negative porin XBW1_3285 PF00155 Aminotransferase class I and II XBW1_3286 PF00753 Metallo-beta-lactamase superfamily XBW1_3287 PF05951 Bacterial protein of unknown function (DUF882) XBW1_3288 PF01797 Transposase IS200 like XBW1_3289 PF01471 Putative peptidoglycan binding domain XBW1_3289 PF03734 L,D-transpeptidase catalytic domain XBW1_3290 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) XBW1_3291 PF03466 LysR substrate binding domain XBW1_3291 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_3293 PF01142 tRNA pseudouridine synthase D (TruD) XBW1_3294 PF06969 HemN C-terminal domain XBW1_3294 PF04055 Radical SAM superfamily XBW1_3297 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XBW1_3298 PF00155 Aminotransferase class I and II XBW1_3300 PF05191 Adenylate kinase, active site lid XBW1_3303 PF01820 D-ala D-ala ligase N-terminus XBW1_3303 PF07478 D-ala D-ala ligase C-terminus XBW1_3306 PF00248 Aldo/keto reductase family XBW1_3309 PF00132 Bacterial transferase hexapeptide (six repeats) XBW1_3311 PF04229 GrpB protein XBW1_3312 PF04310 MukB N-terminal XBW1_3312 PF16330 MukB hinge domain XBW1_3313 PF04288 MukE-like family XBW1_3314 PF17192 MukF middle domain XBW1_3314 PF03882 MukF winged-helix domain XBW1_3314 PF17193 MukF C-terminal domain XBW1_3316 PF02698 DUF218 domain XBW1_3317 PF02348 Cytidylyltransferase XBW1_3318 PF03966 Trm112p-like protein XBW1_3319 PF02606 Tetraacyldisaccharide-1-P 4'-kinase XBW1_3320 PF00664 ABC transporter transmembrane region XBW1_3320 PF00005 ABC transporter XBW1_3321 PF03772 Competence protein XBW1_3321 PF00753 Metallo-beta-lactamase superfamily XBW1_3322 PF00216 Bacterial DNA-binding protein XBW1_3323 PF00575 S1 RNA binding domain XBW1_3324 PF02224 Cytidylate kinase XBW1_3325 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XBW1_3326 PF00266 Aminotransferase class-V XBW1_3328 PF00550 Phosphopantetheine attachment site XBW1_3328 PF07993 Male sterility protein XBW1_3328 PF00668 Condensation domain XBW1_3328 PF00501 AMP-binding enzyme XBW1_3328 PF13193 AMP-binding enzyme C-terminal domain XBW1_3329 PF00710 Asparaginase, N-terminal XBW1_3329 PF17763 Glutaminase/Asparaginase C-terminal domain XBW1_3330 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding XBW1_3330 PF18381 YcaO cyclodehydratase C-terminal domain XBW1_3331 PF01797 Transposase IS200 like XBW1_3332 PF01226 Formate/nitrite transporter XBW1_3336 PF01228 Glycine radical XBW1_3336 PF02901 Pyruvate formate lyase-like XBW1_3337 PF04055 Radical SAM superfamily XBW1_3340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XBW1_3340 PF02403 Seryl-tRNA synthetase N-terminal domain XBW1_3341 PF12002 MgsA AAA+ ATPase C terminal XBW1_3341 PF16193 AAA C-terminal domain XBW1_3341 PF00004 ATPase family associated with various cellular activities (AAA) XBW1_3342 PF03548 Outer membrane lipoprotein carrier protein LolA XBW1_3343 PF01580 FtsK/SpoIIIE family XBW1_3343 PF17854 FtsK alpha domain XBW1_3343 PF09397 Ftsk gamma domain XBW1_3343 PF13491 4TM region of DNA translocase FtsK/SpoIIIE XBW1_3344 PF01037 Lrp/AsnC ligand binding domain XBW1_3345 PF07992 Pyridine nucleotide-disulphide oxidoreductase XBW1_3346 PF00005 ABC transporter XBW1_3346 PF00664 ABC transporter transmembrane region XBW1_3347 PF00005 ABC transporter XBW1_3347 PF00664 ABC transporter transmembrane region XBW1_3348 PF03588 Leucyl/phenylalanyl-tRNA protein transferase XBW1_3350 PF01176 Translation initiation factor 1A / IF-1 XBW1_3351 PF10431 C-terminal, D2-small domain, of ClpB protein XBW1_3351 PF00004 ATPase family associated with various cellular activities (AAA) XBW1_3351 PF07724 AAA domain (Cdc48 subfamily) XBW1_3351 PF02861 Clp amino terminal domain, pathogenicity island component XBW1_3351 PF17871 AAA lid domain XBW1_3352 PF02617 ATP-dependent Clp protease adaptor protein ClpS XBW1_3354 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_3355 PF03956 Lysine exporter LysO XBW1_3356 PF00005 ABC transporter XBW1_3357 PF00497 Bacterial extracellular solute-binding proteins, family 3 XBW1_3358 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_3359 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_3360 PF05958 tRNA (Uracil-5-)-methyltransferase XBW1_3361 PF10722 Putative bacterial sensory transduction regulator XBW1_3362 PF07214 Protein of unknown function (DUF1418) XBW1_3363 PF00462 Glutaredoxin XBW1_3365 PF01569 PAP2 superfamily XBW1_3367 PF00768 D-alanyl-D-alanine carboxypeptidase XBW1_3367 PF07943 Penicillin-binding protein 5, C-terminal domain XBW1_3368 PF00043 Glutathione S-transferase, C-terminal domain XBW1_3368 PF13417 Glutathione S-transferase, N-terminal domain XBW1_3369 PF01370 NAD dependent epimerase/dehydratase family XBW1_3371 PF01634 ATP phosphoribosyltransferase XBW1_3371 PF08029 HisG, C-terminal domain XBW1_3372 PF00155 Aminotransferase class I and II XBW1_3372 PF00815 Histidinol dehydrogenase XBW1_3373 PF00815 Histidinol dehydrogenase XBW1_3373 PF00155 Aminotransferase class I and II XBW1_3374 PF00475 Imidazoleglycerol-phosphate dehydratase XBW1_3375 PF00117 Glutamine amidotransferase class-I XBW1_3376 PF00977 Histidine biosynthesis protein XBW1_3377 PF00977 Histidine biosynthesis protein XBW1_3378 PF01502 Phosphoribosyl-AMP cyclohydrolase XBW1_3378 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase XBW1_3379 PF00465 Iron-containing alcohol dehydrogenase XBW1_3381 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain XBW1_3381 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XBW1_3382 PF01609 Transposase DDE domain XBW1_3382 PF13808 DDE_Tnp_1-associated XBW1_3385 PF01609 Transposase DDE domain XBW1_3385 PF13808 DDE_Tnp_1-associated XBW1_3386 PF03471 Transporter associated domain XBW1_3386 PF00571 CBS domain XBW1_3386 PF03741 Integral membrane protein TerC family XBW1_3387 PF03406 Phage tail fibre repeat XBW1_3388 PF07484 Phage Tail Collar Domain XBW1_3388 PF03335 Phage tail fibre repeat XBW1_3388 PF08400 Prophage tail fibre N-terminal XBW1_3389 PF05170 AsmA family XBW1_3390 PF00692 dUTPase XBW1_3391 PF00485 Phosphoribulokinase / Uridine kinase family XBW1_3392 PF10609 NUBPL iron-transfer P-loop NTPase XBW1_3393 PF09334 tRNA synthetases class I (M) XBW1_3393 PF01588 Putative tRNA binding domain XBW1_3394 PF03788 LrgA family XBW1_3396 PF04172 LrgB-like family XBW1_3397 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region XBW1_3397 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XBW1_3398 PF03949 Malic enzyme, NAD binding domain XBW1_3398 PF00390 Malic enzyme, N-terminal domain XBW1_3399 PF02698 DUF218 domain XBW1_3400 PF04235 Protein of unknown function (DUF418) XBW1_3401 PF01227 GTP cyclohydrolase I XBW1_3402 PF06779 Uncharacterised MFS-type transporter YbfB XBW1_3403 PF03454 MoeA C-terminal region (domain IV) XBW1_3403 PF00994 Probable molybdopterin binding domain XBW1_3403 PF03453 MoeA N-terminal region (domain I and II) XBW1_3404 PF00899 ThiF family XBW1_3409 PF00149 Calcineurin-like phosphoesterase XBW1_3410 PF12848 ABC transporter XBW1_3410 PF00005 ABC transporter XBW1_3412 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XBW1_3413 PF05116 Sucrose-6F-phosphate phosphohydrolase XBW1_3420 PF04193 PQ loop repeat XBW1_3423 PF03811 InsA N-terminal domain XBW1_3423 PF12759 InsA C-terminal domain XBW1_3424 PF03400 IS1 transposase XBW1_3426 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_3430 PF07690 Major Facilitator Superfamily XBW1_3433 PF00892 EamA-like transporter family XBW1_3434 PF00210 Ferritin-like domain XBW1_3435 PF03831 PhnA domain XBW1_3435 PF08274 PhnA Zinc-Ribbon XBW1_3436 PF01797 Transposase IS200 like XBW1_3440 PF00005 ABC transporter XBW1_3441 PF06733 DEAD_2 XBW1_3441 PF00270 DEAD/DEAH box helicase XBW1_3441 PF13307 Helicase C-terminal domain XBW1_3443 PF00581 Rhodanese-like domain XBW1_3444 PF04226 Transglycosylase associated protein XBW1_3445 PF01207 Dihydrouridine synthase (Dus) XBW1_3446 PF00270 DEAD/DEAH box helicase XBW1_3446 PF00271 Helicase conserved C-terminal domain XBW1_3447 PF00440 Bacterial regulatory proteins, tetR family XBW1_3447 PF09209 Tetracyclin repressor-like, C-terminal domain XBW1_3448 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XBW1_3449 PF00005 ABC transporter XBW1_3452 PF01027 Inhibitor of apoptosis-promoting Bax1 XBW1_3453 PF02391 MoaE protein XBW1_3454 PF02597 ThiS family XBW1_3455 PF01967 MoaC family XBW1_3456 PF04055 Radical SAM superfamily XBW1_3456 PF06463 Molybdenum Cofactor Synthesis C XBW1_3457 PF01933 Uncharacterised protein family UPF0052 XBW1_3458 PF04851 Type III restriction enzyme, res subunit XBW1_3458 PF00271 Helicase conserved C-terminal domain XBW1_3458 PF12344 Ultra-violet resistance protein B XBW1_3458 PF02151 UvrB/uvrC motif XBW1_3458 PF17757 UvrB interaction domain XBW1_3461 PF08241 Methyltransferase domain XBW1_3462 PF00155 Aminotransferase class I and II XBW1_3463 PF06968 Biotin and Thiamin Synthesis associated domain XBW1_3463 PF04055 Radical SAM superfamily XBW1_3464 PF00202 Aminotransferase class-III XBW1_3466 PF10282 Lactonase, 7-bladed beta-propeller XBW1_3468 PF03459 TOBE domain XBW1_3468 PF00005 ABC transporter XBW1_3469 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_3471 PF10766 Multidrug efflux pump-associated protein AcrZ XBW1_3473 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_3473 PF03459 TOBE domain XBW1_3474 PF00005 ABC transporter XBW1_3477 PF00300 Histidine phosphatase superfamily (branch 1) XBW1_3478 PF00793 DAHP synthetase I family XBW1_3479 PF04973 Nicotinamide mononucleotide transporter XBW1_3481 PF13174 Tetratricopeptide repeat XBW1_3481 PF16331 TolA binding protein trimerisation XBW1_3482 PF00691 OmpA family XBW1_3483 PF07676 WD40-like Beta Propeller Repeat XBW1_3483 PF04052 TolB amino-terminal domain XBW1_3484 PF06519 TolA C-terminal XBW1_3484 PF06519 TolA C-terminal XBW1_3485 PF02472 Biopolymer transport protein ExbD/TolR XBW1_3486 PF01618 MotA/TolQ/ExbB proton channel family XBW1_3487 PF03061 Thioesterase superfamily XBW1_3488 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) XBW1_3490 PF02322 Cytochrome bd terminal oxidase subunit II XBW1_3491 PF01654 Cytochrome bd terminal oxidase subunit I XBW1_3492 PF02629 CoA binding domain XBW1_3492 PF00549 CoA-ligase XBW1_3493 PF00549 CoA-ligase XBW1_3493 PF08442 ATP-grasp domain XBW1_3494 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XBW1_3494 PF02817 e3 binding domain XBW1_3494 PF00364 Biotin-requiring enzyme XBW1_3495 PF16078 2-oxoglutarate dehydrogenase N-terminus XBW1_3495 PF00676 Dehydrogenase E1 component XBW1_3495 PF16870 2-oxoglutarate dehydrogenase C-terminal XBW1_3495 PF02779 Transketolase, pyrimidine binding domain XBW1_3496 PF13085 2Fe-2S iron-sulfur cluster binding domain XBW1_3497 PF02910 Fumarate reductase flavoprotein C-term XBW1_3497 PF00890 FAD binding domain XBW1_3498 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XBW1_3499 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XBW1_3500 PF00285 Citrate synthase, C-terminal domain XBW1_3502 PF07690 Major Facilitator Superfamily XBW1_3503 PF01784 NIF3 (NGG1p interacting factor 3) XBW1_3504 PF10725 Protein of unknown function (DUF2517) XBW1_3505 PF03814 Potassium-transporting ATPase A subunit XBW1_3507 PF02669 K+-transporting ATPase, c chain XBW1_3508 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XBW1_3508 PF00512 His Kinase A (phospho-acceptor) domain XBW1_3508 PF02702 Osmosensitive K+ channel His kinase sensor domain XBW1_3508 PF13493 Domain of unknown function (DUF4118) XBW1_3508 PF13492 GAF domain XBW1_3509 PF00486 Transcriptional regulatory protein, C terminal XBW1_3509 PF00072 Response regulator receiver domain XBW1_3510 PF17967 Pullulanase N2 domain XBW1_3510 PF03714 Bacterial pullanase-associated domain XBW1_3510 PF18494 Pullulanase Ins domain XBW1_3510 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XBW1_3510 PF11852 Domain of unknown function (DUF3372) XBW1_3512 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XBW1_3512 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XBW1_3512 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XBW1_3512 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XBW1_3513 PF17206 SeqA protein N-terminal domain XBW1_3513 PF03925 SeqA protein C-terminal domain XBW1_3514 PF12697 Alpha/beta hydrolase family XBW1_3517 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_3523 PF07634 RtxA repeat XBW1_3523 PF12146 Serine aminopeptidase, S33 XBW1_3523 PF11647 Membrane Localization Domain XBW1_3523 PF11713 Peptidase C80 family XBW1_3523 PF16671 Actin cross-linking domain XBW1_3525 PF02794 RTX toxin acyltransferase family XBW1_3528 PF00005 ABC transporter XBW1_3528 PF03412 Peptidase C39 family XBW1_3528 PF00664 ABC transporter transmembrane region XBW1_3530 PF03412 Peptidase C39 family XBW1_3530 PF00005 ABC transporter XBW1_3530 PF00664 ABC transporter transmembrane region XBW1_3531 PF12833 Helix-turn-helix domain XBW1_3531 PF01965 DJ-1/PfpI family XBW1_3532 PF13610 DDE domain XBW1_3534 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XBW1_3535 PF00873 AcrB/AcrD/AcrF family XBW1_3540 PF01609 Transposase DDE domain XBW1_3540 PF13808 DDE_Tnp_1-associated XBW1_3543 PF01402 Ribbon-helix-helix protein, copG family XBW1_3544 PF00258 Flavodoxin XBW1_3545 PF01475 Ferric uptake regulator family XBW1_3546 PF00728 Glycosyl hydrolase family 20, catalytic domain XBW1_3546 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain XBW1_3546 PF02838 Glycosyl hydrolase family 20, domain 2 XBW1_3546 PF03173 Putative carbohydrate binding domain XBW1_3547 PF00749 tRNA synthetases class I (E and Q), catalytic domain XBW1_3547 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain XBW1_3548 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_3549 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_3552 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XBW1_3552 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XBW1_3553 PF02378 Phosphotransferase system, EIIC XBW1_3553 PF00367 phosphotransferase system, EIIB XBW1_3553 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 XBW1_3554 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase XBW1_3555 PF01979 Amidohydrolase family XBW1_3556 PF01047 MarR family XBW1_3556 PF00480 ROK family XBW1_3558 PF07690 Major Facilitator Superfamily XBW1_3560 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_3562 PF01494 FAD binding domain XBW1_3563 PF04055 Radical SAM superfamily XBW1_3563 PF01938 TRAM domain XBW1_3563 PF00919 Uncharacterized protein family UPF0004 XBW1_3564 PF02562 PhoH-like protein XBW1_3565 PF02130 Uncharacterized protein family UPF0054 XBW1_3566 PF03471 Transporter associated domain XBW1_3566 PF00571 CBS domain XBW1_3567 PF00795 Carbon-nitrogen hydrolase XBW1_3568 PF00497 Bacterial extracellular solute-binding proteins, family 3 XBW1_3569 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_3570 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_3571 PF00005 ABC transporter XBW1_3572 PF13603 Leucyl-tRNA synthetase, Domain 2 XBW1_3572 PF08264 Anticodon-binding domain of tRNA XBW1_3572 PF00133 tRNA synthetases class I (I, L, M and V) XBW1_3573 PF04390 Lipopolysaccharide-assembly XBW1_3574 PF06144 DNA polymerase III, delta subunit XBW1_3574 PF14840 Processivity clamp loader gamma complex DNA pol III C-term XBW1_3575 PF01467 Cytidylyltransferase-like XBW1_3577 PF02590 Predicted SPOUT methyltransferase XBW1_3578 PF03717 Penicillin-binding Protein dimerisation domain XBW1_3578 PF00905 Penicillin binding protein transpeptidase domain XBW1_3579 PF01098 Cell cycle protein XBW1_3580 PF03330 Lytic transglycolase XBW1_3580 PF05036 Sporulation related domain XBW1_3582 PF00768 D-alanyl-D-alanine carboxypeptidase XBW1_3582 PF07943 Penicillin-binding protein 5, C-terminal domain XBW1_3583 PF04359 Protein of unknown function (DUF493) XBW1_3585 PF02386 Cation transport protein XBW1_3587 PF04055 Radical SAM superfamily XBW1_3587 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family XBW1_3588 PF02537 CrcB-like protein, Camphor Resistance (CrcB) XBW1_3589 PF00313 'Cold-shock' DNA-binding domain XBW1_3590 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XBW1_3590 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XBW1_3593 PF00005 ABC transporter XBW1_3593 PF00571 CBS domain XBW1_3594 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_3595 PF04069 Substrate binding domain of ABC-type glycine betaine transport system XBW1_3596 PF03591 AzlC protein XBW1_3597 PF05437 Branched-chain amino acid transport protein (AzlD) XBW1_3598 PF01047 MarR family XBW1_3599 PF00529 HlyD membrane-fusion protein of T1SS XBW1_3599 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XBW1_3600 PF07690 Major Facilitator Superfamily XBW1_3601 PF13599 Pentapeptide repeats (9 copies) XBW1_3603 PF06276 Ferric iron reductase FhuF-like transporter XBW1_3603 PF04183 IucA / IucC family XBW1_3604 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) XBW1_3606 PF06276 Ferric iron reductase FhuF-like transporter XBW1_3606 PF11575 FhuF 2Fe-2S C-terminal domain XBW1_3607 PF00005 ABC transporter XBW1_3608 PF01032 FecCD transport family XBW1_3609 PF01032 FecCD transport family XBW1_3610 PF01497 Periplasmic binding protein XBW1_3611 PF00593 TonB dependent receptor XBW1_3611 PF07715 TonB-dependent Receptor Plug Domain XBW1_3613 PF00588 SpoU rRNA Methylase family XBW1_3613 PF08032 RNA 2'-O ribose methyltransferase substrate binding XBW1_3617 PF13091 PLD-like domain XBW1_3619 PF10043 Predicted periplasmic lipoprotein (DUF2279) XBW1_3625 PF07724 AAA domain (Cdc48 subfamily) XBW1_3625 PF17871 AAA lid domain XBW1_3625 PF10431 C-terminal, D2-small domain, of ClpB protein XBW1_3625 PF02861 Clp amino terminal domain, pathogenicity island component XBW1_3625 PF00004 ATPase family associated with various cellular activities (AAA) XBW1_3627 PF01479 S4 domain XBW1_3627 PF00849 RNA pseudouridylate synthase XBW1_3628 PF13525 Outer membrane lipoprotein XBW1_3629 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XBW1_3630 PF01817 Chorismate mutase type II XBW1_3630 PF00800 Prephenate dehydratase XBW1_3631 PF02153 Prephenate dehydrogenase XBW1_3631 PF01817 Chorismate mutase type II XBW1_3632 PF00793 DAHP synthetase I family XBW1_3635 PF01245 Ribosomal protein L19 XBW1_3636 PF01746 tRNA (Guanine-1)-methyltransferase XBW1_3637 PF05239 PRC-barrel domain XBW1_3637 PF01782 RimM N-terminal domain XBW1_3638 PF00886 Ribosomal protein S16 XBW1_3639 PF00448 SRP54-type protein, GTPase domain XBW1_3639 PF02881 SRP54-type protein, helical bundle domain XBW1_3639 PF02978 Signal peptide binding domain XBW1_3640 PF01578 Cytochrome C assembly protein XBW1_3641 PF01595 Cyclin M transmembrane N-terminal domain XBW1_3641 PF00571 CBS domain XBW1_3641 PF03471 Transporter associated domain XBW1_3642 PF02664 S-Ribosylhomocysteinase (LuxS) XBW1_3643 PF04262 Glutamate-cysteine ligase XBW1_3645 PF02599 Global regulator protein family XBW1_3646 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XBW1_3646 PF01411 tRNA synthetases class II (A) XBW1_3646 PF02272 DHHA1 domain XBW1_3647 PF00154 recA bacterial DNA recombination protein XBW1_3648 PF02464 Competence-damaged protein XBW1_3649 PF07690 Major Facilitator Superfamily XBW1_3650 PF00501 AMP-binding enzyme XBW1_3650 PF01553 Acyltransferase XBW1_3650 PF13193 AMP-binding enzyme C-terminal domain XBW1_3651 PF01202 Shikimate kinase XBW1_3652 PF00171 Aldehyde dehydrogenase family XBW1_3653 PF01472 PUA domain XBW1_3653 PF00696 Amino acid kinase family XBW1_3654 PF07417 Sigma factor-binding transcriptional regulator Crl XBW1_3656 PF00156 Phosphoribosyl transferase domain XBW1_3657 PF01546 Peptidase family M20/M25/M40 XBW1_3657 PF07687 Peptidase dimerisation domain XBW1_3658 PF11799 impB/mucB/samB family C-terminal domain XBW1_3658 PF00817 impB/mucB/samB family XBW1_3658 PF11798 IMS family HHH motif XBW1_3659 PF07690 Major Facilitator Superfamily XBW1_3660 PF02028 BCCT, betaine/carnitine/choline family transporter XBW1_3661 PF13977 BetI-type transcriptional repressor, C-terminal XBW1_3661 PF00440 Bacterial regulatory proteins, tetR family XBW1_3662 PF00171 Aldehyde dehydrogenase family XBW1_3663 PF05199 GMC oxidoreductase XBW1_3663 PF00732 GMC oxidoreductase XBW1_3664 PF13673 Acetyltransferase (GNAT) domain XBW1_3666 PF07715 TonB-dependent Receptor Plug Domain XBW1_3666 PF00593 TonB dependent receptor XBW1_3667 PF04542 Sigma-70 region 2 XBW1_3667 PF08281 Sigma-70, region 4 XBW1_3669 PF04400 (Na+)-NQR maturation NqrM XBW1_3670 PF02424 ApbE family XBW1_3671 PF00175 Oxidoreductase NAD-binding domain XBW1_3671 PF00970 Oxidoreductase FAD-binding domain XBW1_3671 PF00111 2Fe-2S iron-sulfur cluster binding domain XBW1_3672 PF02508 Rnf-Nqr subunit, membrane protein XBW1_3673 PF02508 Rnf-Nqr subunit, membrane protein XBW1_3674 PF04205 FMN-binding domain XBW1_3675 PF03116 NQR2, RnfD, RnfE family XBW1_3676 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) XBW1_3676 PF11973 NQRA C-terminal domain XBW1_3677 PF03734 L,D-transpeptidase catalytic domain XBW1_3678 PF13230 Glutamine amidotransferases class-II XBW1_3679 PF13580 SIS domain XBW1_3680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XBW1_3680 PF09317 Domain of unknown function (DUF1974) XBW1_3680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XBW1_3681 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain XBW1_3681 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XBW1_3682 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_3682 PF03466 LysR substrate binding domain XBW1_3683 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_3683 PF03466 LysR substrate binding domain XBW1_3689 PF01478 Type IV leader peptidase family XBW1_3690 PF04452 RNA methyltransferase XBW1_3691 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain XBW1_3691 PF02951 Prokaryotic glutathione synthetase, N-terminal domain XBW1_3692 PF02622 Uncharacterized ACR, COG1678 XBW1_3693 PF03652 Holliday junction resolvase XBW1_3694 PF00437 Type II/IV secretion system protein XBW1_3695 PF01168 Alanine racemase, N-terminal domain XBW1_3696 PF03807 NADP oxidoreductase coenzyme F420-dependent XBW1_3696 PF14748 Pyrroline-5-carboxylate reductase dimerisation XBW1_3697 PF02325 YGGT family XBW1_3698 PF01725 Ham1 family XBW1_3699 PF04055 Radical SAM superfamily XBW1_3699 PF06969 HemN C-terminal domain XBW1_3700 PF01497 Periplasmic binding protein XBW1_3701 PF11101 Protein of unknown function (DUF2884) XBW1_3702 PF04960 Glutaminase XBW1_3703 PF04320 Protein with unknown function (DUF469) XBW1_3704 PF02390 Putative methyltransferase XBW1_3705 PF14815 NUDIX domain XBW1_3705 PF00730 HhH-GPD superfamily base excision DNA repair protein XBW1_3705 PF00633 Helix-hairpin-helix motif XBW1_3705 PF10576 Iron-sulfur binding domain of endonuclease III XBW1_3706 PF04362 Bacterial Fe(2+) trafficking XBW1_3707 PF01464 Transglycosylase SLT domain XBW1_3707 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain XBW1_3709 PF00589 Phage integrase family XBW1_3715 PF06755 CbtA_toxin of type IV toxin-antitoxin system XBW1_3733 PF13358 DDE superfamily endonuclease XBW1_3737 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_3737 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_3739 PF13358 DDE superfamily endonuclease XBW1_3743 PF00436 Single-strand binding protein family XBW1_3746 PF01751 Toprim domain XBW1_3746 PF01131 DNA topoisomerase XBW1_3751 PF02040 Arsenical pump membrane protein XBW1_3752 PF01022 Bacterial regulatory protein, arsR family XBW1_3758 PF03796 DnaB-like helicase C terminal domain XBW1_3758 PF00772 DnaB-like helicase N terminal domain XBW1_3761 PF13614 AAA domain XBW1_3762 PF00772 DnaB-like helicase N terminal domain XBW1_3762 PF03796 DnaB-like helicase C terminal domain XBW1_3769 PF01751 Toprim domain XBW1_3769 PF01131 DNA topoisomerase XBW1_3770 PF01797 Transposase IS200 like XBW1_3798 PF00239 Resolvase, N terminal domain XBW1_3798 PF02796 Helix-turn-helix domain of resolvase XBW1_3822 PF13358 DDE superfamily endonuclease XBW1_3824 PF03400 IS1 transposase XBW1_3825 PF03811 InsA N-terminal domain XBW1_3825 PF12759 InsA C-terminal domain XBW1_3828 PF05525 Branched-chain amino acid transport protein XBW1_3829 PF00209 Sodium:neurotransmitter symporter family XBW1_3830 PF06610 L-alanine exporter XBW1_3833 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_3835 PF01435 Peptidase family M48 XBW1_3836 PF13533 Biotin-lipoyl like XBW1_3838 PF07690 Major Facilitator Superfamily XBW1_3839 PF00501 AMP-binding enzyme XBW1_3839 PF13193 AMP-binding enzyme C-terminal domain XBW1_3839 PF00668 Condensation domain XBW1_3839 PF00550 Phosphopantetheine attachment site XBW1_3840 PF00550 Phosphopantetheine attachment site XBW1_3840 PF00698 Acyl transferase domain XBW1_3840 PF00668 Condensation domain XBW1_3840 PF16197 Ketoacyl-synthetase C-terminal extension XBW1_3840 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_3840 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_3841 PF00550 Phosphopantetheine attachment site XBW1_3841 PF00975 Thioesterase domain XBW1_3841 PF00501 AMP-binding enzyme XBW1_3841 PF00668 Condensation domain XBW1_3841 PF13193 AMP-binding enzyme C-terminal domain XBW1_3842 PF00550 Phosphopantetheine attachment site XBW1_3842 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_3842 PF00202 Aminotransferase class-III XBW1_3842 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_3842 PF16197 Ketoacyl-synthetase C-terminal extension XBW1_3842 PF00501 AMP-binding enzyme XBW1_3842 PF13193 AMP-binding enzyme C-terminal domain XBW1_3842 PF00668 Condensation domain XBW1_3844 PF13649 Methyltransferase domain XBW1_3845 PF00975 Thioesterase domain XBW1_3845 PF00550 Phosphopantetheine attachment site XBW1_3845 PF00668 Condensation domain XBW1_3845 PF13193 AMP-binding enzyme C-terminal domain XBW1_3845 PF00501 AMP-binding enzyme XBW1_3846 PF00668 Condensation domain XBW1_3846 PF00550 Phosphopantetheine attachment site XBW1_3846 PF13193 AMP-binding enzyme C-terminal domain XBW1_3846 PF00501 AMP-binding enzyme XBW1_3847 PF00550 Phosphopantetheine attachment site XBW1_3847 PF00668 Condensation domain XBW1_3847 PF00501 AMP-binding enzyme XBW1_3847 PF00975 Thioesterase domain XBW1_3847 PF13193 AMP-binding enzyme C-terminal domain XBW1_3851 PF00012 Hsp70 protein XBW1_3852 PF05860 haemagglutination activity domain XBW1_3852 PF13332 Hemagglutinin repeat XBW1_3853 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB XBW1_3853 PF17287 POTRA domain XBW1_3853 PF08479 POTRA domain, ShlB-type XBW1_3854 PF03400 IS1 transposase XBW1_3855 PF03811 InsA N-terminal domain XBW1_3855 PF12759 InsA C-terminal domain XBW1_3859 PF01609 Transposase DDE domain XBW1_3859 PF13808 DDE_Tnp_1-associated XBW1_3860 PF00152 tRNA synthetases class II (D, K and N) XBW1_3860 PF01336 OB-fold nucleic acid binding domain XBW1_3861 PF00472 RF-1 domain XBW1_3861 PF03462 PCRF domain XBW1_3862 PF17768 RecJ OB domain XBW1_3862 PF02272 DHHA1 domain XBW1_3862 PF01368 DHH family XBW1_3863 PF10411 Disulfide bond isomerase protein N-terminus XBW1_3863 PF13098 Thioredoxin-like domain XBW1_3864 PF00589 Phage integrase family XBW1_3864 PF02899 Phage integrase, N-terminal SAM-like domain XBW1_3865 PF00258 Flavodoxin XBW1_3867 PF03937 Flavinator of succinate dehydrogenase XBW1_3868 PF01571 Aminomethyltransferase folate-binding domain XBW1_3870 PF07690 Major Facilitator Superfamily XBW1_3871 PF02347 Glycine cleavage system P-protein XBW1_3872 PF01597 Glycine cleavage H-protein XBW1_3873 PF08669 Glycine cleavage T-protein C-terminal barrel domain XBW1_3873 PF01571 Aminomethyltransferase folate-binding domain XBW1_3874 PF01494 FAD binding domain XBW1_3875 PF01494 FAD binding domain XBW1_3876 PF00557 Metallopeptidase family M24 XBW1_3876 PF05195 Aminopeptidase P, N-terminal domain XBW1_3877 PF03695 Uncharacterised protein family (UPF0149) XBW1_3878 PF05164 Cell division protein ZapA XBW1_3879 PF01812 5-formyltetrahydrofolate cyclo-ligase family XBW1_3880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XBW1_3880 PF01842 ACT domain XBW1_3880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XBW1_3881 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) XBW1_3882 PF03466 LysR substrate binding domain XBW1_3882 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_3883 PF04402 Protein of unknown function (DUF541) XBW1_3885 PF01810 LysE type translocator XBW1_3886 PF05552 Conserved TM helix XBW1_3886 PF00924 Mechanosensitive ion channel XBW1_3887 PF06062 Uncharacterised protein family (UPF0231) XBW1_3888 PF00330 Aconitase family (aconitate hydratase) XBW1_3888 PF11791 Aconitate B N-terminal domain XBW1_3888 PF06434 Aconitate hydratase 2 N-terminus XBW1_3889 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XBW1_3889 PF07992 Pyridine nucleotide-disulphide oxidoreductase XBW1_3890 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XBW1_3890 PF02817 e3 binding domain XBW1_3890 PF00364 Biotin-requiring enzyme XBW1_3891 PF00456 Transketolase, thiamine diphosphate binding domain XBW1_3891 PF17831 Pyruvate dehydrogenase E1 component middle domain XBW1_3892 PF00392 Bacterial regulatory proteins, gntR family XBW1_3892 PF07729 FCD domain XBW1_3893 PF17113 Regulatory signalling modulator protein AmpE XBW1_3894 PF01510 N-acetylmuramoyl-L-alanine amidase XBW1_3895 PF07963 Prokaryotic N-terminal methylation motif XBW1_3896 PF00437 Type II/IV secretion system protein XBW1_3896 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XBW1_3897 PF00482 Type II secretion system (T2SS), protein F XBW1_3898 PF01121 Dephospho-CoA kinase XBW1_3899 PF07072 Cell division protein XBW1_3900 PF00293 NUDIX domain XBW1_3901 PF00005 ABC transporter XBW1_3901 PF12848 ABC transporter XBW1_3901 PF16326 ABC transporter C-terminal domain XBW1_3902 PF01043 SecA preprotein cross-linking domain XBW1_3902 PF02810 SEC-C motif XBW1_3902 PF07516 SecA Wing and Scaffold domain XBW1_3902 PF07517 SecA DEAD-like domain XBW1_3903 PF06558 Secretion monitor precursor protein (SecM) XBW1_3905 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase XBW1_3906 PF00091 Tubulin/FtsZ family, GTPase domain XBW1_3906 PF12327 FtsZ family, C-terminal domain XBW1_3907 PF02491 SHS2 domain inserted in FTSA XBW1_3908 PF03799 Cell division protein FtsQ XBW1_3908 PF08478 POTRA domain, FtsQ-type XBW1_3909 PF01820 D-ala D-ala ligase N-terminus XBW1_3909 PF07478 D-ala D-ala ligase C-terminus XBW1_3910 PF08245 Mur ligase middle domain XBW1_3910 PF02875 Mur ligase family, glutamate ligase domain XBW1_3910 PF01225 Mur ligase family, catalytic domain XBW1_3911 PF03033 Glycosyltransferase family 28 N-terminal domain XBW1_3911 PF04101 Glycosyltransferase family 28 C-terminal domain XBW1_3912 PF01098 Cell cycle protein XBW1_3913 PF02875 Mur ligase family, glutamate ligase domain XBW1_3913 PF08245 Mur ligase middle domain XBW1_3914 PF00953 Glycosyl transferase family 4 XBW1_3914 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 XBW1_3915 PF08245 Mur ligase middle domain XBW1_3915 PF02875 Mur ligase family, glutamate ligase domain XBW1_3915 PF01225 Mur ligase family, catalytic domain XBW1_3916 PF08245 Mur ligase middle domain XBW1_3916 PF01225 Mur ligase family, catalytic domain XBW1_3916 PF02875 Mur ligase family, glutamate ligase domain XBW1_3917 PF00905 Penicillin binding protein transpeptidase domain XBW1_3917 PF03717 Penicillin-binding Protein dimerisation domain XBW1_3918 PF04999 Cell division protein FtsL XBW1_3919 PF01795 MraW methylase family XBW1_3920 PF02381 MraZ protein, putative antitoxin-like XBW1_3921 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family XBW1_3921 PF00356 Bacterial regulatory proteins, lacI family XBW1_3922 PF10369 Small subunit of acetolactate synthase XBW1_3923 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XBW1_3923 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XBW1_3923 PF00205 Thiamine pyrophosphate enzyme, central domain XBW1_3924 PF00501 AMP-binding enzyme XBW1_3925 PF03466 LysR substrate binding domain XBW1_3925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_3926 PF00682 HMGL-like XBW1_3926 PF08502 LeuA allosteric (dimerisation) domain XBW1_3927 PF00180 Isocitrate/isopropylmalate dehydrogenase XBW1_3928 PF02976 DNA mismatch repair enzyme MutH XBW1_3930 PF01327 Polypeptide deformylase XBW1_3931 PF01053 Cys/Met metabolism PLP-dependent enzyme XBW1_3932 PF00291 Pyridoxal-phosphate dependent enzyme XBW1_3932 PF00571 CBS domain XBW1_3936 PF16363 GDP-mannose 4,6 dehydratase XBW1_3940 PF00694 Aconitase C-terminal domain XBW1_3941 PF00330 Aconitase family (aconitate hydratase) XBW1_3942 PF03466 LysR substrate binding domain XBW1_3942 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_3944 PF01161 Phosphatidylethanolamine-binding protein XBW1_3945 PF00491 Arginase family XBW1_3946 PF17944 Arginine decarboxylase C-terminal helical extension XBW1_3946 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XBW1_3946 PF17810 Arginine decarboxylase helical bundle domain XBW1_3947 PF02773 S-adenosylmethionine synthetase, C-terminal domain XBW1_3947 PF02772 S-adenosylmethionine synthetase, central domain XBW1_3947 PF00438 S-adenosylmethionine synthetase, N-terminal domain XBW1_3948 PF17283 SprT-like zinc ribbon domain XBW1_3948 PF10263 SprT-like family XBW1_3953 PF00375 Sodium:dicarboxylate symporter family XBW1_3954 PF00171 Aldehyde dehydrogenase family XBW1_3955 PF00939 Sodium:sulfate symporter transmembrane region XBW1_3956 PF03952 Enolase, N-terminal domain XBW1_3956 PF00113 Enolase, C-terminal TIM barrel domain XBW1_3957 PF00117 Glutamine amidotransferase class-I XBW1_3957 PF06418 CTP synthase N-terminus XBW1_3958 PF03819 MazG nucleotide pyrophosphohydrolase domain XBW1_3959 PF04607 Region found in RelA / SpoT proteins XBW1_3959 PF13291 ACT domain XBW1_3959 PF02824 TGS domain XBW1_3960 PF05958 tRNA (Uracil-5-)-methyltransferase XBW1_3960 PF01938 TRAM domain XBW1_3961 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XBW1_3961 PF00512 His Kinase A (phospho-acceptor) domain XBW1_3961 PF00072 Response regulator receiver domain XBW1_3961 PF00672 HAMP domain XBW1_3961 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XBW1_3961 PF01627 Hpt domain XBW1_3962 PF13286 Phosphohydrolase-associated domain XBW1_3962 PF01966 HD domain XBW1_3963 PF01048 Phosphorylase superfamily XBW1_3964 PF01497 Periplasmic binding protein XBW1_3965 PF01521 Iron-sulphur cluster biosynthesis XBW1_3966 PF00202 Aminotransferase class-III XBW1_3967 PF07977 FabA-like domain XBW1_3971 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_3971 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_3972 PF00550 Phosphopantetheine attachment site XBW1_3981 PF14814 Bifunctional transglycosylase second domain XBW1_3981 PF00912 Transglycosylase XBW1_3981 PF00905 Penicillin binding protein transpeptidase domain XBW1_3981 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal XBW1_3982 PF00271 Helicase conserved C-terminal domain XBW1_3982 PF00270 DEAD/DEAH box helicase XBW1_3982 PF04408 Helicase associated domain (HA2) XBW1_3982 PF08482 ATP-dependent helicase C-terminal XBW1_3983 PF17746 SfsA N-terminal OB domain XBW1_3983 PF03749 Sugar fermentation stimulation protein RE domain XBW1_3984 PF01258 Prokaryotic dksA/traR C4-type zinc finger XBW1_3985 PF00749 tRNA synthetases class I (E and Q), catalytic domain XBW1_3986 PF12627 Probable RNA and SrmB- binding site of polymerase A XBW1_3986 PF01743 Poly A polymerase head domain XBW1_3986 PF12626 Polymerase A arginine-rich C-terminus XBW1_3987 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XBW1_3988 PF02548 Ketopantoate hydroxymethyltransferase XBW1_3989 PF02569 Pantoate-beta-alanine ligase XBW1_3990 PF02261 Aspartate decarboxylase XBW1_3991 PF01061 ABC-2 type transporter XBW1_3992 PF00005 ABC transporter XBW1_3993 PF00484 Carbonic anhydrase XBW1_3994 PF00156 Phosphoribosyl transferase domain XBW1_3995 PF13693 Winged helix-turn-helix DNA-binding XBW1_4003 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) XBW1_4005 PF02423 Ornithine cyclodeaminase/mu-crystallin family XBW1_4006 PF00291 Pyridoxal-phosphate dependent enzyme XBW1_4008 PF00551 Formyl transferase XBW1_4009 PF01810 LysE type translocator XBW1_4010 PF08402 TOBE domain XBW1_4010 PF00005 ABC transporter XBW1_4011 PF01554 MatE XBW1_4012 PF05643 Putative bacterial lipoprotein (DUF799) XBW1_4014 PF03783 Curli production assembly/transport component CsgG XBW1_4015 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XBW1_4015 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XBW1_4019 PF00589 Phage integrase family XBW1_4020 PF07683 Cobalamin synthesis protein cobW C-terminal domain XBW1_4020 PF02492 CobW/HypB/UreG, nucleotide-binding domain XBW1_4021 PF04328 Selenoprotein, putative XBW1_4022 PF02554 Carbon starvation protein CstA XBW1_4022 PF13722 5TM C-terminal transporter carbon starvation CstA XBW1_4023 PF00884 Sulfatase XBW1_4024 PF07929 Plasmid pRiA4b ORF-3-like protein XBW1_4025 PF13358 DDE superfamily endonuclease XBW1_4029 PF00313 'Cold-shock' DNA-binding domain XBW1_4031 PF12759 InsA C-terminal domain XBW1_4031 PF03811 InsA N-terminal domain XBW1_4034 PF14864 Alkyl sulfatase C-terminal XBW1_4034 PF14863 Alkyl sulfatase dimerisation XBW1_4034 PF00753 Metallo-beta-lactamase superfamily XBW1_4036 PF05188 MutS domain II XBW1_4036 PF00488 MutS domain V XBW1_4036 PF05190 MutS family domain IV XBW1_4036 PF01624 MutS domain I XBW1_4036 PF05192 MutS domain III XBW1_4037 PF00140 Sigma-70 factor, region 1.2 XBW1_4037 PF04545 Sigma-70, region 4 XBW1_4037 PF04542 Sigma-70 region 2 XBW1_4037 PF04539 Sigma-70 region 3 XBW1_4038 PF01551 Peptidase family M23 XBW1_4038 PF01476 LysM domain XBW1_4040 PF01975 Survival protein SurE XBW1_4041 PF01142 tRNA pseudouridine synthase D (TruD) XBW1_4042 PF02542 YgbB family XBW1_4043 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase XBW1_4044 PF04977 Septum formation initiator XBW1_4047 PF00009 Elongation factor Tu GTP binding domain XBW1_4048 PF01507 Phosphoadenosine phosphosulfate reductase family XBW1_4049 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XBW1_4049 PF14824 Sirohaem biosynthesis protein central XBW1_4049 PF10414 Sirohaem synthase dimerisation region XBW1_4050 PF01507 Phosphoadenosine phosphosulfate reductase family XBW1_4051 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XBW1_4051 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XBW1_4052 PF00175 Oxidoreductase NAD-binding domain XBW1_4052 PF00667 FAD binding domain XBW1_4052 PF00258 Flavodoxin XBW1_4053 PF01242 6-pyruvoyl tetrahydropterin synthase XBW1_4054 PF04055 Radical SAM superfamily XBW1_4055 PF00324 Amino acid permease XBW1_4056 PF03372 Endonuclease/Exonuclease/phosphatase family XBW1_4061 PF12724 Flavodoxin domain XBW1_4062 PF02386 Cation transport protein XBW1_4063 PF01205 Uncharacterized protein family UPF0029 XBW1_4063 PF09186 Domain of unknown function (DUF1949) XBW1_4064 PF00557 Metallopeptidase family M24 XBW1_4065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XBW1_4065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XBW1_4065 PF00378 Enoyl-CoA hydratase/isomerase XBW1_4066 PF02803 Thiolase, C-terminal domain XBW1_4066 PF00108 Thiolase, N-terminal domain XBW1_4067 PF00970 Oxidoreductase FAD-binding domain XBW1_4067 PF00175 Oxidoreductase NAD-binding domain XBW1_4068 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase XBW1_4069 PF02357 Transcription termination factor nusG XBW1_4070 PF00490 Delta-aminolevulinic acid dehydratase XBW1_4071 PF00902 Sec-independent protein translocase protein (TatC) XBW1_4073 PF02416 mttA/Hcf106 family XBW1_4074 PF03109 ABC1 family XBW1_4075 PF02036 SCP-2 sterol transfer family XBW1_4076 PF01209 ubiE/COQ5 methyltransferase family XBW1_4079 PF09335 SNARE associated Golgi protein XBW1_4081 PF01048 Phosphorylase superfamily XBW1_4083 PF01717 Cobalamin-independent synthase, Catalytic domain XBW1_4083 PF08267 Cobalamin-independent synthase, N-terminal domain XBW1_4084 PF03466 LysR substrate binding domain XBW1_4084 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_4085 PF00892 EamA-like transporter family XBW1_4086 PF00999 Sodium/hydrogen exchanger family XBW1_4087 PF00860 Permease family XBW1_4091 PF07350 Protein of unknown function (DUF1479) XBW1_4092 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_4094 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_4094 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_4095 PF02583 Metal-sensitive transcriptional repressor XBW1_4096 PF00107 Zinc-binding dehydrogenase XBW1_4096 PF08240 Alcohol dehydrogenase GroES-like domain XBW1_4097 PF00756 Putative esterase XBW1_4098 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XBW1_4098 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XBW1_4102 PF00436 Single-strand binding protein family XBW1_4103 PF17760 UvrA interaction domain XBW1_4103 PF17755 UvrA DNA-binding domain XBW1_4103 PF00005 ABC transporter XBW1_4105 PF02600 Disulfide bond formation protein DsbB XBW1_4106 PF00144 Beta-lactamase XBW1_4111 PF00155 Aminotransferase class I and II XBW1_4112 PF01168 Alanine racemase, N-terminal domain XBW1_4112 PF00842 Alanine racemase, C-terminal domain XBW1_4113 PF03796 DnaB-like helicase C terminal domain XBW1_4113 PF00772 DnaB-like helicase N terminal domain XBW1_4114 PF08240 Alcohol dehydrogenase GroES-like domain XBW1_4114 PF00107 Zinc-binding dehydrogenase XBW1_4115 PF01207 Dihydrouridine synthase (Dus) XBW1_4120 PF01475 Ferric uptake regulator family XBW1_4121 PF00717 Peptidase S24-like XBW1_4121 PF01726 LexA DNA binding domain XBW1_4122 PF01219 Prokaryotic diacylglycerol kinase XBW1_4123 PF01553 Acyltransferase XBW1_4124 PF01040 UbiA prenyltransferase family XBW1_4125 PF04345 Chorismate lyase XBW1_4126 PF00342 Phosphoglucose isomerase XBW1_4127 PF01842 ACT domain XBW1_4127 PF00696 Amino acid kinase family XBW1_4128 PF09339 IclR helix-turn-helix domain XBW1_4128 PF01614 Bacterial transcriptional regulator XBW1_4129 PF01081 KDPG and KHG aldolase XBW1_4131 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) XBW1_4132 PF00463 Isocitrate lyase family XBW1_4133 PF01274 Malate synthase XBW1_4134 PF04204 Homoserine O-succinyltransferase XBW1_4141 PF00005 ABC transporter XBW1_4141 PF09383 NIL domain XBW1_4142 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_4143 PF03180 NLPA lipoprotein XBW1_4145 PF18389 TrmO C-terminal domain XBW1_4145 PF01980 tRNA-methyltransferase O XBW1_4146 PF04073 Aminoacyl-tRNA editing domain XBW1_4146 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XBW1_4146 PF03129 Anticodon binding domain XBW1_4147 PF17185 NlpE C-terminal OB domain XBW1_4147 PF04170 NlpE N-terminal domain XBW1_4148 PF07073 Modulator of Rho-dependent transcription termination (ROF) XBW1_4154 PF09179 TilS substrate binding domain XBW1_4154 PF11734 TilS substrate C-terminal domain XBW1_4154 PF01171 PP-loop family XBW1_4155 PF00892 EamA-like transporter family XBW1_4156 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit XBW1_4157 PF02811 PHP domain XBW1_4157 PF14579 Helix-hairpin-helix motif XBW1_4157 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XBW1_4157 PF07733 Bacterial DNA polymerase III alpha NTPase domain XBW1_4157 PF01336 OB-fold nucleic acid binding domain XBW1_4158 PF01351 Ribonuclease HII XBW1_4159 PF02684 Lipid-A-disaccharide synthetase XBW1_4160 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 XBW1_4160 PF00132 Bacterial transferase hexapeptide (six repeats) XBW1_4161 PF07977 FabA-like domain XBW1_4162 PF00132 Bacterial transferase hexapeptide (six repeats) XBW1_4162 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD XBW1_4163 PF03938 Outer membrane protein (OmpH-like) XBW1_4164 PF07244 Surface antigen variable number repeat XBW1_4164 PF01103 Surface antigen XBW1_4165 PF17820 PDZ domain XBW1_4165 PF02163 Peptidase family M50 XBW1_4167 PF01255 Putative undecaprenyl diphosphate synthase XBW1_4168 PF13288 DXP reductoisomerase C-terminal domain XBW1_4168 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase XBW1_4168 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain XBW1_4169 PF01765 Ribosome recycling factor XBW1_4170 PF00696 Amino acid kinase family XBW1_4171 PF00889 Elongation factor TS XBW1_4172 PF00318 Ribosomal protein S2 XBW1_4173 PF00557 Metallopeptidase family M24 XBW1_4174 PF01842 ACT domain XBW1_4174 PF08335 GlnD PII-uridylyltransferase XBW1_4174 PF01966 HD domain XBW1_4175 PF00132 Bacterial transferase hexapeptide (six repeats) XBW1_4175 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal XBW1_4175 PF14602 Hexapeptide repeat of succinyl-transferase XBW1_4176 PF11944 Protein of unknown function (DUF3461) XBW1_4177 PF00258 Flavodoxin XBW1_4178 PF04287 tRNA pseudouridine synthase C XBW1_4178 PF00849 RNA pseudouridylate synthase XBW1_4179 PF04287 tRNA pseudouridine synthase C XBW1_4181 PF07348 Syd protein (SUKH-2) XBW1_4187 PF14489 QueF-like protein XBW1_4187 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term XBW1_4188 PF03641 Possible lysine decarboxylase XBW1_4188 PF11892 Domain of unknown function (DUF3412) XBW1_4188 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases XBW1_4189 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XBW1_4189 PF01367 5'-3' exonuclease, C-terminal SAM fold XBW1_4190 PF02321 Outer membrane efflux protein XBW1_4191 PF00529 HlyD membrane-fusion protein of T1SS XBW1_4192 PF00005 ABC transporter XBW1_4192 PF00664 ABC transporter transmembrane region XBW1_4193 PF02974 Protease inhibitor Inh XBW1_4194 PF08548 Peptidase M10 serralysin C terminal XBW1_4194 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) XBW1_4195 PF18125 RlmM ferredoxin-like domain XBW1_4195 PF01728 FtsJ-like methyltransferase XBW1_4196 PF04241 Protein of unknown function (DUF423) XBW1_4197 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_4197 PF03466 LysR substrate binding domain XBW1_4198 PF00266 Aminotransferase class-V XBW1_4199 PF02657 Fe-S metabolism associated domain XBW1_4200 PF00899 ThiF family XBW1_4201 PF03562 MltA specific insert domain XBW1_4201 PF06725 3D domain XBW1_4204 PF01520 N-acetylmuramoyl-L-alanine amidase XBW1_4204 PF11741 AMIN domain XBW1_4205 PF00696 Amino acid kinase family XBW1_4205 PF00583 Acetyltransferase (GNAT) family XBW1_4206 PF13538 UvrD-like helicase C-terminal domain XBW1_4207 PF13361 UvrD-like helicase C-terminal domain XBW1_4207 PF00580 UvrD/REP helicase N-terminal domain XBW1_4207 PF12705 PD-(D/E)XK nuclease superfamily XBW1_4208 PF16187 Middle or third domain of peptidase_M16 XBW1_4208 PF05193 Peptidase M16 inactive domain XBW1_4208 PF00675 Insulinase (Peptidase family M16) XBW1_4209 PF17946 RecC C-terminal domain XBW1_4212 PF07963 Prokaryotic N-terminal methylation motif XBW1_4214 PF00303 Thymidylate synthase XBW1_4215 PF01790 Prolipoprotein diacylglyceryl transferase XBW1_4216 PF01590 GAF domain XBW1_4216 PF05524 PEP-utilising enzyme, N-terminal XBW1_4216 PF00391 PEP-utilising enzyme, mobile domain XBW1_4216 PF02896 PEP-utilising enzyme, TIM barrel domain XBW1_4217 PF00293 NUDIX domain XBW1_4219 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_4220 PF00005 ABC transporter XBW1_4221 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_4230 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase XBW1_4232 PF03062 MBOAT, membrane-bound O-acyltransferase family XBW1_4235 PF02447 GntP family permease XBW1_4236 PF01202 Shikimate kinase XBW1_4237 PF00356 Bacterial regulatory proteins, lacI family XBW1_4237 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family XBW1_4238 PF00356 Bacterial regulatory proteins, lacI family XBW1_4239 PF02056 Family 4 glycosyl hydrolase XBW1_4239 PF11975 Family 4 glycosyl hydrolase C-terminal domain XBW1_4240 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit XBW1_4241 PF02378 Phosphotransferase system, EIIC XBW1_4242 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XBW1_4245 PF00440 Bacterial regulatory proteins, tetR family XBW1_4246 PF07690 Major Facilitator Superfamily XBW1_4248 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XBW1_4249 PF01609 Transposase DDE domain XBW1_4249 PF02281 Transposase Tn5 dimerisation domain XBW1_4249 PF14706 Transposase DNA-binding XBW1_4250 PF13610 DDE domain XBW1_4251 PF01850 PIN domain XBW1_4252 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin XBW1_4255 PF00270 DEAD/DEAH box helicase XBW1_4255 PF18019 HD domain XBW1_4255 PF00271 Helicase conserved C-terminal domain XBW1_4260 PF09704 CRISPR-associated protein (Cas_Cas5) XBW1_4265 PF01047 MarR family XBW1_4267 PF01053 Cys/Met metabolism PLP-dependent enzyme XBW1_4268 PF00291 Pyridoxal-phosphate dependent enzyme XBW1_4271 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XBW1_4271 PF01411 tRNA synthetases class II (A) XBW1_4275 PF01797 Transposase IS200 like XBW1_4276 PF01139 tRNA-splicing ligase RtcB XBW1_4278 PF02463 RecF/RecN/SMC N terminal domain XBW1_4279 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XBW1_4282 PF13416 Bacterial extracellular solute-binding protein XBW1_4284 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_4285 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_4286 PF08402 TOBE domain XBW1_4286 PF00005 ABC transporter XBW1_4287 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XBW1_4287 PF00381 PTS HPr component phosphorylation site XBW1_4288 PF00294 pfkB family carbohydrate kinase XBW1_4288 PF00294 pfkB family carbohydrate kinase XBW1_4289 PF02378 Phosphotransferase system, EIIC XBW1_4289 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XBW1_4295 PF01381 Helix-turn-helix XBW1_4296 PF01177 Asp/Glu/Hydantoin racemase XBW1_4297 PF03466 LysR substrate binding domain XBW1_4297 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_4298 PF00375 Sodium:dicarboxylate symporter family XBW1_4302 PF01048 Phosphorylase superfamily XBW1_4303 PF01906 Putative heavy-metal-binding XBW1_4309 PF03400 IS1 transposase XBW1_4310 PF03811 InsA N-terminal domain XBW1_4310 PF12759 InsA C-terminal domain XBW1_4312 PF01797 Transposase IS200 like XBW1_4317 PF00589 Phage integrase family XBW1_4317 PF13356 Arm DNA-binding domain XBW1_4318 PF00589 Phage integrase family XBW1_4318 PF13356 Arm DNA-binding domain XBW1_4321 PF13693 Winged helix-turn-helix DNA-binding XBW1_4325 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_4329 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_4332 PF13356 Arm DNA-binding domain XBW1_4332 PF00589 Phage integrase family XBW1_4334 PF00144 Beta-lactamase XBW1_4335 PF03739 Lipopolysaccharide export system permease LptF/LptG XBW1_4336 PF03739 Lipopolysaccharide export system permease LptF/LptG XBW1_4337 PF02789 Cytosol aminopeptidase family, N-terminal domain XBW1_4337 PF00883 Cytosol aminopeptidase family, catalytic domain XBW1_4338 PF04364 DNA polymerase III chi subunit, HolC XBW1_4339 PF00133 tRNA synthetases class I (I, L, M and V) XBW1_4339 PF08264 Anticodon-binding domain of tRNA XBW1_4339 PF10458 Valyl tRNA synthetase tRNA binding arm XBW1_4340 PF00497 Bacterial extracellular solute-binding proteins, family 3 XBW1_4343 PF00528 Binding-protein-dependent transport system inner membrane component XBW1_4344 PF00005 ABC transporter XBW1_4345 PF00497 Bacterial extracellular solute-binding proteins, family 3 XBW1_4346 PF00583 Acetyltransferase (GNAT) family XBW1_4347 PF06877 Regulator of ribonuclease activity B XBW1_4348 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XBW1_4348 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XBW1_4349 PF00294 pfkB family carbohydrate kinase XBW1_4350 PF02668 Taurine catabolism dioxygenase TauD, TfdA family XBW1_4352 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family XBW1_4359 PF01810 LysE type translocator XBW1_4360 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family XBW1_4361 PF10127 RNA repair pathway DNA polymerase beta family XBW1_4362 PF01139 tRNA-splicing ligase RtcB XBW1_4364 PF00158 Sigma-54 interaction domain XBW1_4364 PF06956 Regulator of RNA terminal phosphate cyclase XBW1_4365 PF12706 Beta-lactamase superfamily domain XBW1_4368 PF13193 AMP-binding enzyme C-terminal domain XBW1_4368 PF00501 AMP-binding enzyme XBW1_4369 PF04715 Anthranilate synthase component I, N terminal region XBW1_4369 PF00425 chorismate binding enzyme XBW1_4370 PF00117 Glutamine amidotransferase class-I XBW1_4371 PF13193 AMP-binding enzyme C-terminal domain XBW1_4371 PF00501 AMP-binding enzyme XBW1_4373 PF00465 Iron-containing alcohol dehydrogenase XBW1_4373 PF00171 Aldehyde dehydrogenase family XBW1_4374 PF01494 FAD binding domain XBW1_4378 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XBW1_4378 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XBW1_4380 PF00384 Molybdopterin oxidoreductase XBW1_4381 PF05684 Protein of unknown function (DUF819) XBW1_4384 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain XBW1_4384 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain XBW1_4385 PF01042 Endoribonuclease L-PSP XBW1_4386 PF01243 Pyridoxamine 5'-phosphate oxidase XBW1_4388 PF01541 GIY-YIG catalytic domain XBW1_4389 PF13508 Acetyltransferase (GNAT) domain XBW1_4395 PF07690 Major Facilitator Superfamily XBW1_4396 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_4396 PF03466 LysR substrate binding domain XBW1_4397 PF00106 short chain dehydrogenase XBW1_4399 PF02350 UDP-N-acetylglucosamine 2-epimerase XBW1_4404 PF11924 Inverse autotransporter, beta-domain XBW1_4404 PF09134 Invasin, domain 3 XBW1_4404 PF02369 Bacterial Ig-like domain (group 1) XBW1_4405 PF06580 Histidine kinase XBW1_4405 PF07694 5TMR of 5TMR-LYT XBW1_4406 PF04397 LytTr DNA-binding domain XBW1_4406 PF00072 Response regulator receiver domain XBW1_4408 PF03880 DbpA RNA binding domain XBW1_4408 PF00271 Helicase conserved C-terminal domain XBW1_4408 PF00270 DEAD/DEAH box helicase XBW1_4408 PF12343 Cold shock protein DEAD box A XBW1_4409 PF13181 Tetratricopeptide repeat XBW1_4409 PF07719 Tetratricopeptide repeat XBW1_4410 PF01138 3' exoribonuclease family, domain 1 XBW1_4410 PF03725 3' exoribonuclease family, domain 2 XBW1_4410 PF00575 S1 RNA binding domain XBW1_4410 PF00013 KH domain XBW1_4410 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain XBW1_4411 PF00312 Ribosomal protein S15 XBW1_4412 PF16198 tRNA pseudouridylate synthase B C-terminal domain XBW1_4412 PF09157 Pseudouridine synthase II TruB, C-terminal XBW1_4412 PF01509 TruB family pseudouridylate synthase (N terminal domain) XBW1_4413 PF02033 Ribosome-binding factor A XBW1_4414 PF11987 Translation-initiation factor 2 XBW1_4414 PF00009 Elongation factor Tu GTP binding domain XBW1_4414 PF08364 Bacterial translation initiation factor IF-2 associated region XBW1_4414 PF04760 Translation initiation factor IF-2, N-terminal region XBW1_4414 PF03144 Elongation factor Tu domain 2 XBW1_4415 PF08529 NusA N-terminal domain XBW1_4415 PF13184 NusA-like KH domain XBW1_4415 PF00575 S1 RNA binding domain XBW1_4416 PF17384 RimP C-terminal SH3 domain XBW1_4416 PF02576 RimP N-terminal domain XBW1_4417 PF03840 Preprotein translocase SecG subunit XBW1_4418 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XBW1_4418 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XBW1_4418 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XBW1_4418 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XBW1_4419 PF00809 Pterin binding enzyme XBW1_4420 PF17862 AAA+ lid domain XBW1_4420 PF01434 Peptidase family M41 XBW1_4420 PF06480 FtsH Extracellular XBW1_4420 PF00004 ATPase family associated with various cellular activities (AAA) XBW1_4421 PF01728 FtsJ-like methyltransferase XBW1_4422 PF01985 CRS1 / YhbY (CRM) domain XBW1_4423 PF03449 Transcription elongation factor, N-terminal XBW1_4423 PF01272 Transcription elongation factor, GreA/GreB, C-term XBW1_4425 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family XBW1_4426 PF01018 GTP1/OBG XBW1_4426 PF01926 50S ribosome-binding GTPase XBW1_4427 PF01016 Ribosomal L27 protein XBW1_4429 PF00829 Ribosomal prokaryotic L21 protein XBW1_4430 PF00348 Polyprenyl synthetase XBW1_4433 PF13693 Winged helix-turn-helix DNA-binding XBW1_4434 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XBW1_4434 PF00056 lactate/malate dehydrogenase, NAD binding domain XBW1_4435 PF02863 Arginine repressor, C-terminal domain XBW1_4435 PF01316 Arginine repressor, DNA binding domain XBW1_4436 PF01225 Mur ligase family, catalytic domain XBW1_4436 PF02875 Mur ligase family, glutamate ligase domain XBW1_4436 PF08245 Mur ligase middle domain XBW1_4437 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain XBW1_4438 PF00719 Inorganic pyrophosphatase XBW1_4439 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like XBW1_4440 PF04357 TamB, inner membrane protein subunit of TAM complex XBW1_4441 PF01103 Surface antigen XBW1_4441 PF07244 Surface antigen variable number repeat XBW1_4441 PF17243 POTRA domain TamA domain 1 XBW1_4442 PF01625 Peptide methionine sulfoxide reductase XBW1_4443 PF00571 CBS domain XBW1_4443 PF01595 Cyclin M transmembrane N-terminal domain XBW1_4443 PF03471 Transporter associated domain XBW1_4444 PF06526 Protein of unknown function (DUF1107) XBW1_4445 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) XBW1_4446 PF00459 Inositol monophosphatase family XBW1_4447 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XBW1_4447 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XBW1_4448 PF03948 Ribosomal protein L9, C-terminal domain XBW1_4448 PF01281 Ribosomal protein L9, N-terminal domain XBW1_4449 PF01084 Ribosomal protein S18 XBW1_4450 PF00436 Single-strand binding protein family XBW1_4451 PF01250 Ribosomal protein S6 XBW1_4452 PF00588 SpoU rRNA Methylase family XBW1_4452 PF08032 RNA 2'-O ribose methyltransferase substrate binding XBW1_4453 PF00575 S1 RNA binding domain XBW1_4453 PF17876 Cold shock domain XBW1_4453 PF08461 Ribonuclease R winged-helix domain XBW1_4453 PF08206 Ribonuclease B OB domain XBW1_4453 PF00773 RNB domain XBW1_4454 PF02082 Transcriptional regulator XBW1_4455 PF00709 Adenylosuccinate synthetase XBW1_4456 PF01145 SPFH domain / Band 7 family XBW1_4457 PF12221 Bacterial membrane protein N terminal XBW1_4457 PF01145 SPFH domain / Band 7 family XBW1_4460 PF13167 GTP-binding GTPase N-terminal XBW1_4460 PF01926 50S ribosome-binding GTPase XBW1_4460 PF16360 GTP-binding GTPase Middle Region XBW1_4461 PF17209 Hfq protein XBW1_4463 PF08676 MutL C terminal dimerisation domain XBW1_4463 PF01119 DNA mismatch repair protein, C-terminal domain XBW1_4464 PF01520 N-acetylmuramoyl-L-alanine amidase XBW1_4465 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE XBW1_4466 PF08331 Domain of unknown function (DUF1730) XBW1_4467 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal XBW1_4467 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal XBW1_4469 PF01425 Amidase XBW1_4470 PF01011 PQQ enzyme repeat XBW1_4471 PF07690 Major Facilitator Superfamily XBW1_4472 PF12759 InsA C-terminal domain XBW1_4472 PF03811 InsA N-terminal domain XBW1_4473 PF03400 IS1 transposase XBW1_4474 PF03466 LysR substrate binding domain XBW1_4474 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_4476 PF01494 FAD binding domain XBW1_4477 PF00550 Phosphopantetheine attachment site XBW1_4477 PF00668 Condensation domain XBW1_4477 PF00975 Thioesterase domain XBW1_4477 PF00501 AMP-binding enzyme XBW1_4477 PF13193 AMP-binding enzyme C-terminal domain XBW1_4482 PF00929 Exonuclease XBW1_4484 PF03193 RsgA GTPase XBW1_4485 PF02666 Phosphatidylserine decarboxylase XBW1_4486 PF12795 Mechanosensitive ion channel porin domain XBW1_4486 PF00924 Mechanosensitive ion channel XBW1_4486 PF12794 Mechanosensitive ion channel inner membrane domain 1 XBW1_4488 PF00155 Aminotransferase class I and II XBW1_4488 PF00392 Bacterial regulatory proteins, gntR family XBW1_4489 PF02627 Carboxymuconolactone decarboxylase family XBW1_4490 PF05656 Protein of unknown function (DUF805) XBW1_4491 PF00356 Bacterial regulatory proteins, lacI family XBW1_4492 PF00083 Sugar (and other) transporter XBW1_4492 PF07690 Major Facilitator Superfamily XBW1_4494 PF12146 Serine aminopeptidase, S33 XBW1_4495 PF00271 Helicase conserved C-terminal domain XBW1_4495 PF00570 HRDC domain XBW1_4495 PF00270 DEAD/DEAH box helicase XBW1_4495 PF16124 RecQ zinc-binding XBW1_4495 PF09382 RQC domain XBW1_4498 PF03061 Thioesterase superfamily XBW1_4502 PF00892 EamA-like transporter family XBW1_4503 PF01544 CorA-like Mg2+ transporter protein XBW1_4504 PF00580 UvrD/REP helicase N-terminal domain XBW1_4504 PF13361 UvrD-like helicase C-terminal domain XBW1_4505 PF13419 Haloacid dehalogenase-like hydrolase XBW1_4506 PF02899 Phage integrase, N-terminal SAM-like domain XBW1_4506 PF00589 Phage integrase family XBW1_4507 PF04340 Protein of unknown function, DUF484 XBW1_4508 PF01678 Diaminopimelate epimerase XBW1_4509 PF13627 Prokaryotic lipoprotein-attachment site XBW1_4510 PF01491 Frataxin-like domain XBW1_4511 PF01797 Transposase IS200 like XBW1_4515 PF01295 Adenylate cyclase, class-I XBW1_4515 PF12633 Adenylate cyclase NT domain XBW1_4516 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain XBW1_4516 PF03900 Porphobilinogen deaminase, C-terminal domain XBW1_4517 PF02602 Uroporphyrinogen-III synthase HemD XBW1_4518 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase XBW1_4519 PF07219 HemY protein N-terminus XBW1_4519 PF07719 Tetratricopeptide repeat XBW1_4521 PF00324 Amino acid permease XBW1_4522 PF03808 Glycosyl transferase WecB/TagA/CpsF family XBW1_4523 PF06899 WzyE protein, O-antigen assembly polymerase XBW1_4524 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 XBW1_4525 PF01943 Polysaccharide biosynthesis protein XBW1_4526 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XBW1_4528 PF00483 Nucleotidyl transferase XBW1_4529 PF16363 GDP-mannose 4,6 dehydratase XBW1_4530 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XBW1_4530 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XBW1_4530 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XBW1_4531 PF02350 UDP-N-acetylglucosamine 2-epimerase XBW1_4533 PF02706 Chain length determinant protein XBW1_4534 PF00953 Glycosyl transferase family 4 XBW1_4535 PF07498 Rho termination factor, N-terminal domain XBW1_4535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XBW1_4535 PF07497 Rho termination factor, RNA-binding domain XBW1_4538 PF00085 Thioredoxin XBW1_4540 PF00270 DEAD/DEAH box helicase XBW1_4540 PF00271 Helicase conserved C-terminal domain XBW1_4541 PF02541 Ppx/GppA phosphatase family XBW1_4542 PF00580 UvrD/REP helicase N-terminal domain XBW1_4542 PF13361 UvrD-like helicase C-terminal domain XBW1_4543 PF00850 Histone deacetylase domain XBW1_4544 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain XBW1_4544 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain XBW1_4545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_4545 PF03466 LysR substrate binding domain XBW1_4546 PF00291 Pyridoxal-phosphate dependent enzyme XBW1_4546 PF00585 C-terminal regulatory domain of Threonine dehydratase XBW1_4547 PF00920 Dehydratase family XBW1_4548 PF01063 Amino-transferase class IV XBW1_4550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XBW1_4550 PF00205 Thiamine pyrophosphate enzyme, central domain XBW1_4550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XBW1_4553 PF13335 Magnesium chelatase, subunit ChlI C-terminal XBW1_4553 PF01078 Magnesium chelatase, subunit ChlI XBW1_4554 PF04219 Protein of unknown function, DUF XBW1_4555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_4555 PF03466 LysR substrate binding domain XBW1_4559 PF00132 Bacterial transferase hexapeptide (six repeats) XBW1_4560 PF07369 Protein of unknown function (DUF1488) XBW1_4561 PF18317 Shikimate 5'-dehydrogenase C-terminal domain XBW1_4561 PF01488 Shikimate / quinate 5-dehydrogenase XBW1_4561 PF08501 Shikimate dehydrogenase substrate binding domain XBW1_4562 PF01300 Telomere recombination XBW1_4563 PF01396 Topoisomerase DNA binding C4 zinc finger XBW1_4564 PF02481 DNA recombination-mediator protein A XBW1_4564 PF17782 DprA winged helix domain XBW1_4565 PF01327 Polypeptide deformylase XBW1_4566 PF00551 Formyl transferase XBW1_4566 PF02911 Formyl transferase, C-terminal domain XBW1_4567 PF01189 16S rRNA methyltransferase RsmB/F XBW1_4567 PF01029 NusB family XBW1_4568 PF02080 TrkA-C domain XBW1_4568 PF02254 TrkA-N domain XBW1_4569 PF03889 Alternative ribosome-rescue factor A XBW1_4570 PF13411 MerR HTH family regulatory protein XBW1_4571 PF01196 Ribosomal protein L17 XBW1_4572 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain XBW1_4572 PF01000 RNA polymerase Rpb3/RpoA insert domain XBW1_4572 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain XBW1_4573 PF01479 S4 domain XBW1_4573 PF00163 Ribosomal protein S4/S9 N-terminal domain XBW1_4574 PF00411 Ribosomal protein S11 XBW1_4575 PF00416 Ribosomal protein S13/S18 XBW1_4577 PF00344 SecY translocase XBW1_4578 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A XBW1_4579 PF00327 Ribosomal protein L30p/L7e XBW1_4580 PF00333 Ribosomal protein S5, N-terminal domain XBW1_4580 PF03719 Ribosomal protein S5, C-terminal domain XBW1_4581 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast XBW1_4582 PF00347 Ribosomal protein L6 XBW1_4583 PF00410 Ribosomal protein S8 XBW1_4584 PF00253 Ribosomal protein S14p/S29e XBW1_4585 PF00673 ribosomal L5P family C-terminus XBW1_4585 PF00281 Ribosomal protein L5 XBW1_4586 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 XBW1_4587 PF00238 Ribosomal protein L14p/L23e XBW1_4588 PF00366 Ribosomal protein S17 XBW1_4589 PF00831 Ribosomal L29 protein XBW1_4590 PF00252 Ribosomal protein L16p/L10e XBW1_4591 PF07650 KH domain XBW1_4591 PF00189 Ribosomal protein S3, C-terminal domain XBW1_4592 PF00237 Ribosomal protein L22p/L17e XBW1_4593 PF00203 Ribosomal protein S19 XBW1_4594 PF00181 Ribosomal Proteins L2, RNA binding domain XBW1_4594 PF03947 Ribosomal Proteins L2, C-terminal domain XBW1_4595 PF00276 Ribosomal protein L23 XBW1_4596 PF00573 Ribosomal protein L4/L1 family XBW1_4597 PF00297 Ribosomal protein L3 XBW1_4598 PF00338 Ribosomal protein S10p/S20e XBW1_4600 PF00210 Ferritin-like domain XBW1_4601 PF03143 Elongation factor Tu C-terminal domain XBW1_4601 PF03144 Elongation factor Tu domain 2 XBW1_4601 PF00009 Elongation factor Tu GTP binding domain XBW1_4604 PF00485 Phosphoribulokinase / Uridine kinase family XBW1_4605 PF08279 HTH domain XBW1_4605 PF03099 Biotin/lipoate A/B protein ligase family XBW1_4605 PF02237 Biotin protein ligase C terminal domain XBW1_4606 PF01565 FAD binding domain XBW1_4606 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain XBW1_4611 PF01177 Asp/Glu/Hydantoin racemase XBW1_4612 PF00593 TonB dependent receptor XBW1_4612 PF07715 TonB-dependent Receptor Plug Domain XBW1_4613 PF05958 tRNA (Uracil-5-)-methyltransferase XBW1_4614 PF07226 Protein of unknown function (DUF1422) XBW1_4615 PF00440 Bacterial regulatory proteins, tetR family XBW1_4616 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XBW1_4616 PF07992 Pyridine nucleotide-disulphide oxidoreductase XBW1_4617 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XBW1_4617 PF03466 LysR substrate binding domain XBW1_4618 PF00206 Lyase XBW1_4618 PF14698 Argininosuccinate lyase C-terminal XBW1_4619 PF00764 Arginosuccinate synthase XBW1_4620 PF00696 Amino acid kinase family XBW1_4621 PF01118 Semialdehyde dehydrogenase, NAD binding domain XBW1_4621 PF02774 Semialdehyde dehydrogenase, dimerisation domain XBW1_4622 PF01546 Peptidase family M20/M25/M40 XBW1_4622 PF07687 Peptidase dimerisation domain XBW1_4623 PF02219 Methylenetetrahydrofolate reductase XBW1_4627 PF00311 Phosphoenolpyruvate carboxylase XBW1_4628 PF00742 Homoserine dehydrogenase XBW1_4628 PF00696 Amino acid kinase family XBW1_4628 PF03447 Homoserine dehydrogenase, NAD binding domain XBW1_4629 PF01053 Cys/Met metabolism PLP-dependent enzyme XBW1_4630 PF01340 Met Apo-repressor, MetJ XBW1_4631 PF01197 Ribosomal protein L31 XBW1_4632 PF17764 3′ DNA-binding domain (3′BD) XBW1_4632 PF18319 PriA DNA helicase Cys-rich region (CRR) domain XBW1_4632 PF00270 DEAD/DEAH box helicase XBW1_4632 PF18074 Primosomal protein N C-terminal domain XBW1_4632 PF00271 Helicase conserved C-terminal domain XBW1_4633 PF00356 Bacterial regulatory proteins, lacI family XBW1_4634 PF05036 Sporulation related domain XBW1_4635 PF00227 Proteasome subunit XBW1_4636 PF00004 ATPase family associated with various cellular activities (AAA) XBW1_4636 PF10431 C-terminal, D2-small domain, of ClpB protein XBW1_4636 PF07724 AAA domain (Cdc48 subfamily) XBW1_4637 PF01040 UbiA prenyltransferase family XBW1_4638 PF03737 Aldolase/RraA XBW1_4639 PF06005 Cell division protein ZapB XBW1_4641 PF00230 Major intrinsic protein XBW1_4642 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XBW1_4642 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XBW1_4643 PF07690 Major Facilitator Superfamily XBW1_4644 PF00970 Oxidoreductase FAD-binding domain XBW1_4644 PF00175 Oxidoreductase NAD-binding domain XBW1_4645 PF05656 Protein of unknown function (DUF805) XBW1_4646 PF07305 Protein of unknown function (DUF1454) XBW1_4647 PF00121 Triosephosphate isomerase XBW1_4649 PF00365 Phosphofructokinase XBW1_4650 PF16916 Dimerisation domain of Zinc Transporter XBW1_4650 PF01545 Cation efflux family XBW1_4657 PF07813 LTXXQ motif family protein XBW1_4658 PF00072 Response regulator receiver domain XBW1_4658 PF00486 Transcriptional regulatory protein, C terminal XBW1_4659 PF16527 Two-component sensor protein CpxA, periplasmic domain XBW1_4659 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XBW1_4659 PF00672 HAMP domain XBW1_4659 PF00512 His Kinase A (phospho-acceptor) domain XBW1_4661 PF00155 Aminotransferase class I and II XBW1_4664 PF04991 LicD family XBW1_4667 PF01501 Glycosyl transferase family 8 XBW1_4667 PF00535 Glycosyl transferase family 2 XBW1_4670 PF13439 Glycosyltransferase Family 4 XBW1_4670 PF00534 Glycosyl transferases group 1 XBW1_4671 PF02719 Polysaccharide biosynthesis protein XBW1_4671 PF08485 Polysaccharide biosynthesis protein C-terminal XBW1_4672 PF04321 RmlD substrate binding domain XBW1_4673 PF02350 UDP-N-acetylglucosamine 2-epimerase XBW1_4675 PF13358 DDE superfamily endonuclease XBW1_4676 PF00588 SpoU rRNA Methylase family XBW1_4677 PF06426 Serine acetyltransferase, N-terminal XBW1_4677 PF00132 Bacterial transferase hexapeptide (six repeats) XBW1_4678 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus XBW1_4678 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus XBW1_4679 PF02556 Preprotein translocase subunit SecB XBW1_4680 PF00581 Rhodanese-like domain XBW1_4681 PF01551 Peptidase family M23 XBW1_4682 PF04748 Divergent polysaccharide deacetylase XBW1_4683 PF00107 Zinc-binding dehydrogenase XBW1_4683 PF08240 Alcohol dehydrogenase GroES-like domain XBW1_4684 PF00155 Aminotransferase class I and II XBW1_4685 PF01370 NAD dependent epimerase/dehydratase family XBW1_4686 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XBW1_4687 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XBW1_4690 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XBW1_4691 PF13439 Glycosyltransferase Family 4 XBW1_4691 PF00534 Glycosyl transferases group 1 XBW1_4692 PF00534 Glycosyl transferases group 1 XBW1_4692 PF13439 Glycosyltransferase Family 4 XBW1_4693 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XBW1_4695 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) XBW1_4696 PF00535 Glycosyl transferase family 2 XBW1_4697 PF01467 Cytidylyltransferase-like XBW1_4698 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XBW1_4698 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XBW1_4698 PF06827 Zinc finger found in FPG and IleRS XBW1_4699 PF04932 O-Antigen ligase XBW1_4701 PF13439 Glycosyltransferase Family 4 XBW1_4701 PF00534 Glycosyl transferases group 1 XBW1_4703 PF00534 Glycosyl transferases group 1 XBW1_4704 PF00471 Ribosomal protein L33 XBW1_4705 PF00830 Ribosomal L28 family XBW1_4707 PF04002 RadC-like JAB domain XBW1_4708 PF02441 Flavoprotein XBW1_4708 PF04127 DNA / pantothenate metabolism flavoprotein XBW1_4709 PF00692 dUTPase XBW1_4710 PF00440 Bacterial regulatory proteins, tetR family XBW1_4711 PF00156 Phosphoribosyl transferase domain XBW1_4712 PF03725 3' exoribonuclease family, domain 2 XBW1_4712 PF01138 3' exoribonuclease family, domain 1 XBW1_4713 PF08340 Domain of unknown function (DUF1732) XBW1_4713 PF03755 YicC-like family, N-terminal region XBW1_4727 PF07690 Major Facilitator Superfamily XBW1_4729 PF00294 pfkB family carbohydrate kinase XBW1_4731 PF07702 UTRA domain XBW1_4731 PF00392 Bacterial regulatory proteins, gntR family XBW1_4733 PF17074 Darcynin, domain of unknown function XBW1_4735 PF00884 Sulfatase XBW1_4736 PF09106 Elongation factor SelB, winged helix XBW1_4736 PF03144 Elongation factor Tu domain 2 XBW1_4736 PF00009 Elongation factor Tu GTP binding domain XBW1_4736 PF09107 Elongation factor SelB, winged helix XBW1_4737 PF12390 Selenocysteine synthase N terminal XBW1_4737 PF03841 L-seryl-tRNA selenium transferase XBW1_4738 PF04216 Protein involved in formate dehydrogenase formation XBW1_4744 PF12728 Helix-turn-helix domain XBW1_4749 PF00384 Molybdopterin oxidoreductase XBW1_4749 PF01568 Molydopterin dinucleotide binding domain XBW1_4749 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XBW1_4752 PF02634 FdhD/NarQ family XBW1_4758 PF03544 Gram-negative bacterial TonB protein C-terminal XBW1_4759 PF02525 Flavodoxin-like fold XBW1_4760 PF00106 short chain dehydrogenase XBW1_4762 PF00202 Aminotransferase class-III XBW1_4764 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_4764 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_4766 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_4766 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_4770 PF00550 Phosphopantetheine attachment site XBW1_4771 PF13358 DDE superfamily endonuclease XBW1_4772 PF10396 GTP-binding protein TrmE N-terminus XBW1_4772 PF01926 50S ribosome-binding GTPase XBW1_4772 PF12631 MnmE helical domain XBW1_4773 PF14849 YidC periplasmic domain XBW1_4773 PF02096 60Kd inner membrane protein XBW1_4774 PF01809 Putative membrane protein insertion efficiency factor XBW1_4775 PF00825 Ribonuclease P XBW1_4776 PF00468 Ribosomal protein L34 XBW1_CDS3306568R PF08173 Membrane bound YbgT-like protein XBW1_mp0001 PF01051 Initiator Replication protein XBW1_mp0004 PF13610 DDE domain XBW1_mp0007 PF13610 DDE domain XBW1_mp0009 PF05973 Phage derived protein Gp49-like (DUF891) XBW1_mp0010 PF13610 DDE domain XBW1_mp0016 PF00106 short chain dehydrogenase XBW1_mp0017 PF00248 Aldo/keto reductase family XBW1_mp0019 PF03129 Anticodon binding domain XBW1_mp0019 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XBW1_mp0020 PF09334 tRNA synthetases class I (M) XBW1_mp0020 PF13603 Leucyl-tRNA synthetase, Domain 2 XBW1_mp0020 PF00133 tRNA synthetases class I (I, L, M and V) XBW1_mp0020 PF08264 Anticodon-binding domain of tRNA XBW1_mp0021 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XBW1_mp0023 PF01048 Phosphorylase superfamily XBW1_mp0024 PF17676 LD-carboxypeptidase C-terminal domain XBW1_mp0024 PF02016 LD-carboxypeptidase N-terminal domain XBW1_mp0025 PF13649 Methyltransferase domain XBW1_mp0026 PF01336 OB-fold nucleic acid binding domain XBW1_mp0026 PF00152 tRNA synthetases class II (D, K and N) XBW1_mp0032 PF00239 Resolvase, N terminal domain XBW1_mp0032 PF02796 Helix-turn-helix domain of resolvase XBW1_mp0034 PF00239 Resolvase, N terminal domain XBW1_mp0034 PF02796 Helix-turn-helix domain of resolvase XBW1_mp0037 PF04055 Radical SAM superfamily XBW1_mp0040 PF00005 ABC transporter XBW1_mp0040 PF03412 Peptidase C39 family XBW1_mp0040 PF00664 ABC transporter transmembrane region XBW1_mp0047 PF03400 IS1 transposase XBW1_mp0048 PF03811 InsA N-terminal domain XBW1_mp0048 PF12759 InsA C-terminal domain XBW1_mp0073 PF13358 DDE superfamily endonuclease XBW1_mp0082 PF05016 ParE toxin of type II toxin-antitoxin system, parDE XBW1_mp0084 PF02517 CPBP intramembrane metalloprotease XBW1_mp0087 PF04717 Type VI secretion system, phage-baseplate injector XBW1_mp0088 PF03400 IS1 transposase XBW1_mp0089 PF03811 InsA N-terminal domain XBW1_mp0089 PF12759 InsA C-terminal domain XBW1_mp0103 PF04717 Type VI secretion system, phage-baseplate injector XBW1_mp0116 PF00239 Resolvase, N terminal domain XBW1_mp0116 PF02796 Helix-turn-helix domain of resolvase XBW1_mp0118 PF12323 Helix-turn-helix domain XBW1_mp0118 PF01385 Probable transposase XBW1_mp0118 PF07282 Putative transposase DNA-binding domain XBW1_mp0120 PF01609 Transposase DDE domain XBW1_mp0120 PF13808 DDE_Tnp_1-associated XBW1_mp0124 PF13358 DDE superfamily endonuclease XBW1_mp0144 PF01381 Helix-turn-helix XBW1_mp0147 PF02086 D12 class N6 adenine-specific DNA methyltransferase XBW1_mp0148 PF04381 Putative exonuclease, RdgC XBW1_mp0150 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system XBW1_mp0151 PF12728 Helix-turn-helix domain XBW1_mp0151 PF00145 C-5 cytosine-specific DNA methylase XBW1_mp0161 PF05973 Phage derived protein Gp49-like (DUF891) XBW1_mp0165 PF08240 Alcohol dehydrogenase GroES-like domain XBW1_mp0165 PF13823 Alcohol dehydrogenase GroES-associated XBW1_mp0165 PF00107 Zinc-binding dehydrogenase XBW1_mp0166 PF13610 DDE domain XBW1_mp0167 PF00975 Thioesterase domain XBW1_mp0168 PF00668 Condensation domain XBW1_mp0168 PF13193 AMP-binding enzyme C-terminal domain XBW1_mp0168 PF16197 Ketoacyl-synthetase C-terminal extension XBW1_mp0168 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_mp0168 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_mp0168 PF00550 Phosphopantetheine attachment site XBW1_mp0168 PF00501 AMP-binding enzyme XBW1_mp0168 PF00202 Aminotransferase class-III XBW1_mp0172 PF00501 AMP-binding enzyme XBW1_mp0172 PF00668 Condensation domain XBW1_mp0172 PF16197 Ketoacyl-synthetase C-terminal extension XBW1_mp0172 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_mp0172 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_mp0172 PF00550 Phosphopantetheine attachment site XBW1_mp0172 PF00202 Aminotransferase class-III XBW1_mp0172 PF13193 AMP-binding enzyme C-terminal domain XBW1_mp0173 PF00698 Acyl transferase domain XBW1_mp0173 PF16197 Ketoacyl-synthetase C-terminal extension XBW1_mp0173 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_mp0173 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_mp0173 PF08659 KR domain XBW1_mp0173 PF00550 Phosphopantetheine attachment site XBW1_mp0174 PF02668 Taurine catabolism dioxygenase TauD, TfdA family XBW1_mp0175 PF00155 Aminotransferase class I and II XBW1_mp0176 PF04055 Radical SAM superfamily XBW1_mp0176 PF12544 Lysine-2,3-aminomutase XBW1_mp0178 PF13610 DDE domain XBW1_mp0179 PF13340 Putative transposase of IS4/5 family (DUF4096) XBW1_mp0181 PF00665 Integrase core domain XBW1_mp0181 PF13936 Helix-turn-helix domain XBW1_mp0183 PF13610 DDE domain XBW1_mp0184 PF03811 InsA N-terminal domain XBW1_mp0184 PF12759 InsA C-terminal domain XBW1_mp0185 PF03400 IS1 transposase XBW1_mp0186 PF02796 Helix-turn-helix domain of resolvase XBW1_mp0186 PF00239 Resolvase, N terminal domain XBW1_mp0189 PF16197 Ketoacyl-synthetase C-terminal extension XBW1_mp0189 PF00698 Acyl transferase domain XBW1_mp0189 PF14765 Polyketide synthase dehydratase XBW1_mp0189 PF00550 Phosphopantetheine attachment site XBW1_mp0189 PF08659 KR domain XBW1_mp0189 PF02801 Beta-ketoacyl synthase, C-terminal domain XBW1_mp0189 PF00109 Beta-ketoacyl synthase, N-terminal domain XBW1_mp0195 PF13610 DDE domain XBW1_p0006 PF13693 Winged helix-turn-helix DNA-binding XBW1_p0007 PF05638 Type VI secretion system effector, Hcp