XBJ1_0001 SM00382 ATPases associated with a variety of cellular activities XBJ1_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain XBJ1_0002 SM00480 DNA polymerase III beta subunit XBJ1_0004 SM00387 Histidine kinase-like ATPases XBJ1_0004 SM00433 TopoisomeraseII XBJ1_0008 SM00859 Semialdehyde dehydrogenase, NAD binding domain XBJ1_0015 SM00487 DEAD-like helicases superfamily XBJ1_0022 SM00382 ATPases associated with a variety of cellular activities XBJ1_0031 SM01228 XBJ1_0031 XBJ1_0033 SM00344 helix_turn_helix ASNC type XBJ1_0035 SM00327 von Willebrand factor (vWF) type A domain XBJ1_0036 SM00382 ATPases associated with a variety of cellular activities XBJ1_0038 SM00382 ATPases associated with a variety of cellular activities XBJ1_0042 SM00354 helix_turn _helix lactose operon repressor XBJ1_0069 SM00363 S4 RNA-binding domain XBJ1_0081 SM00345 helix_turn_helix gluconate operon transcriptional repressor XBJ1_0081 SM00895 XBJ1_0081 XBJ1_0091 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XBJ1_0097 SM00642 Alpha-amylase domain XBJ1_0140 SM00420 helix_turn_helix, Deoxyribose operon repressor XBJ1_0140 SM01134 XBJ1_0140 XBJ1_0142 SM00450 Rhodanese Homology Domain XBJ1_0165 SM00899 XBJ1_0165 XBJ1_0184 SM00316 Ribosomal protein S1-like RNA-binding domain XBJ1_0184 SM00732 Likely ribonuclease with RNase H fold. XBJ1_0186 SM00448 cheY-homologous receiver domain XBJ1_0186 SM00862 Transcriptional regulatory protein, C terminal XBJ1_0187 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XBJ1_0187 SM00387 Histidine kinase-like ATPases XBJ1_0187 SM00388 His Kinase A (phosphoacceptor) domain XBJ1_0191 SM00382 ATPases associated with a variety of cellular activities XBJ1_0193 SM00062 Bacterial periplasmic substrate-binding proteins XBJ1_0197 SM00634 Bacterial Ig-like domain (group 1) XBJ1_0208 SM00729 Elongator protein 3, MiaB family, Radical SAM XBJ1_0209 SM00382 ATPases associated with a variety of cellular activities XBJ1_0209 SM00448 cheY-homologous receiver domain XBJ1_0210 SM00091 PAS domain XBJ1_0210 SM00387 Histidine kinase-like ATPases XBJ1_0210 SM00388 His Kinase A (phosphoacceptor) domain XBJ1_0211 SM01230 XBJ1_0211 XBJ1_0212 SM00869 Autotransporter beta-domain XBJ1_0231 SM00487 DEAD-like helicases superfamily XBJ1_0231 SM00490 helicase superfamily c-terminal domain XBJ1_0233 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XBJ1_0233 SM00954 Region found in RelA / SpoT proteins XBJ1_0234 SM01409 XBJ1_0234 XBJ1_0235 SM00072 Guanylate kinase homologues. XBJ1_0236 SM00532 Ligase N family XBJ1_0249 SM00382 ATPases associated with a variety of cellular activities XBJ1_0250 SM00382 ATPases associated with a variety of cellular activities XBJ1_0258 SM00912 haemagglutination activity domain XBJ1_0272 SM00382 ATPases associated with a variety of cellular activities XBJ1_0272 SM01086 C-terminal, D2-small domain, of ClpB protein XBJ1_0310 SM00823 Phosphopantetheine attachment site XBJ1_0318 SM00646 XBJ1_0318 XBJ1_0319 SM00853 MutL C terminal dimerisation domain XBJ1_0319 SM01340 XBJ1_0319 XBJ1_0323 SM00244 prohibitin homologues XBJ1_0324 SM00244 prohibitin homologues XBJ1_0325 SM00788 Adenylosuccinate synthetase XBJ1_0327 SM00316 Ribosomal protein S1-like RNA-binding domain XBJ1_0327 SM00357 Cold shock protein domain XBJ1_0327 SM00955 XBJ1_0327 XBJ1_0328 SM00967 RNA 2'-O ribose methyltransferase substrate binding XBJ1_0338 SM01091 Transporter associated domain XBJ1_0360 SM01103 XBJ1_0360 XBJ1_0362 SM00382 ATPases associated with a variety of cellular activities XBJ1_0367 SM00316 Ribosomal protein S1-like RNA-binding domain XBJ1_0371 SM01387 XBJ1_0371 XBJ1_0372 SM00316 Ribosomal protein S1-like RNA-binding domain XBJ1_0372 SM00322 K homology RNA-binding domain XBJ1_0373 SM00028 Tetratricopeptide repeats XBJ1_0374 SM00487 DEAD-like helicases superfamily XBJ1_0374 SM00490 helicase superfamily c-terminal domain XBJ1_0375 SM00448 cheY-homologous receiver domain XBJ1_0375 SM00850 LytTr DNA-binding domain XBJ1_0376 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XBJ1_0377 SM00257 Lysin motif XBJ1_0381 SM00822 XBJ1_0381 XBJ1_0402 SM00421 helix_turn_helix, Lux Regulon XBJ1_0412 SM01236 XBJ1_0412 XBJ1_0414 SM00382 ATPases associated with a variety of cellular activities XBJ1_0416 SM00244 prohibitin homologues XBJ1_0430 SM00062 Bacterial periplasmic substrate-binding proteins XBJ1_0431 SM00382 ATPases associated with a variety of cellular activities XBJ1_0435 SM00062 Bacterial periplasmic substrate-binding proteins XBJ1_0442 SM00966 SpoVT / AbrB like domain XBJ1_0454 SM00487 DEAD-like helicases superfamily XBJ1_0471 SM00382 ATPases associated with a variety of cellular activities XBJ1_0489 SM00382 ATPases associated with a variety of cellular activities XBJ1_0491 SM00235 Zinc-dependent metalloprotease XBJ1_0512 SM01004 Delta-aminolevulinic acid dehydratase XBJ1_0513 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. XBJ1_0528 SM00345 helix_turn_helix gluconate operon transcriptional repressor XBJ1_0528 SM00895 XBJ1_0528 XBJ1_0531 SM00796 Allophanate hydrolase subunit 1 XBJ1_0531 SM00797 Allophanate hydrolase subunit 2 XBJ1_0532 SM00878 Biotin carboxylase C-terminal domain XBJ1_0553 SM00382 ATPases associated with a variety of cellular activities XBJ1_0553 SM00962 SRP54-type protein, GTPase domain XBJ1_0553 SM00963 SRP54-type protein, helical bundle domain XBJ1_0554 SM00382 ATPases associated with a variety of cellular activities XBJ1_0567 SM00636 XBJ1_0567 XBJ1_0570 SM00636 XBJ1_0570 XBJ1_0571 SM00530 Helix-turn-helix XRE-family like proteins XBJ1_0576 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs XBJ1_0576 SM00475 5'-3' exonuclease XBJ1_0587 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XBJ1_0596 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XBJ1_0598 SM00935 Outer membrane protein (OmpH-like) XBJ1_0604 SM00481 DNA polymerase alpha chain like domain XBJ1_0607 SM00977 TilS substrate C-terminal domain XBJ1_0615 SM00382 ATPases associated with a variety of cellular activities XBJ1_0615 SM00930 XBJ1_0615 XBJ1_0654 SM00479 XBJ1_0654 XBJ1_0666 SM00232 JAB/MPN domain XBJ1_0699 SM00778 Zinc-binding domain of primase-helicase XBJ1_0712 SM00530 Helix-turn-helix XRE-family like proteins XBJ1_0716 SM00357 Cold shock protein domain XBJ1_0730 SM00434 DNA Topoisomerase IV XBJ1_0731 SM00387 Histidine kinase-like ATPases XBJ1_0731 SM00388 His Kinase A (phosphoacceptor) domain XBJ1_0731 SM00448 cheY-homologous receiver domain XBJ1_0732 SM00421 helix_turn_helix, Lux Regulon XBJ1_0732 SM00448 cheY-homologous receiver domain XBJ1_0733 SM00387 Histidine kinase-like ATPases XBJ1_0737 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XBJ1_0764 SM00992 Hemimethylated DNA-binding protein YccV like XBJ1_0774 SM00823 Phosphopantetheine attachment site XBJ1_0775 SM00823 Phosphopantetheine attachment site XBJ1_0786 SM00382 ATPases associated with a variety of cellular activities XBJ1_0787 SM00981 XBJ1_0787 XBJ1_0797 SM00849 Metallo-beta-lactamase superfamily XBJ1_0810 SM00382 ATPases associated with a variety of cellular activities XBJ1_0811 SM00849 Metallo-beta-lactamase superfamily XBJ1_0813 SM00411 bacterial (prokaryotic) histone like domain XBJ1_0814 SM00316 Ribosomal protein S1-like RNA-binding domain XBJ1_0818 SM00870 XBJ1_0818 XBJ1_0837 SM00382 ATPases associated with a variety of cellular activities XBJ1_0858 SM00671 Sel1-like repeats. XBJ1_0865 SM00347 helix_turn_helix multiple antibiotic resistance protein XBJ1_0875 SM00342 helix_turn_helix, arabinose operon control protein XBJ1_0887 SM00382 ATPases associated with a variety of cellular activities XBJ1_0889 SM00843 XBJ1_0889 XBJ1_0890 SM00344 helix_turn_helix ASNC type XBJ1_0893 SM00382 ATPases associated with a variety of cellular activities XBJ1_0894 SM00382 ATPases associated with a variety of cellular activities XBJ1_0897 SM00316 Ribosomal protein S1-like RNA-binding domain XBJ1_0898 SM00382 ATPases associated with a variety of cellular activities XBJ1_0898 SM01086 C-terminal, D2-small domain, of ClpB protein XBJ1_0900 SM00357 Cold shock protein domain XBJ1_0902 SM00382 ATPases associated with a variety of cellular activities XBJ1_0903 SM00062 Bacterial periplasmic substrate-binding proteins XBJ1_0903 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. XBJ1_0910 SM00014 Acid phosphatase homologues XBJ1_0912 SM00936 Penicillin-binding protein 5, C-terminal domain XBJ1_0927 SM01350 XBJ1_0927 XBJ1_0928 SM01091 Transporter associated domain XBJ1_0940 SM00919 Malic enzyme, NAD binding domain XBJ1_0940 SM01274 XBJ1_0940 XBJ1_0947 SM00852 Probable molybdopterin binding domain XBJ1_0950 SM00530 Helix-turn-helix XRE-family like proteins XBJ1_0954 SM00382 ATPases associated with a variety of cellular activities XBJ1_0964 SM00487 DEAD-like helicases superfamily XBJ1_0964 SM00488 XBJ1_0964 XBJ1_0964 SM00491 XBJ1_0964 XBJ1_0966 SM00450 Rhodanese Homology Domain XBJ1_0969 SM00487 DEAD-like helicases superfamily XBJ1_0969 SM00490 helicase superfamily c-terminal domain XBJ1_0972 SM00382 ATPases associated with a variety of cellular activities XBJ1_0979 SM00729 Elongator protein 3, MiaB family, Radical SAM XBJ1_0981 SM00487 DEAD-like helicases superfamily XBJ1_0981 SM00490 helicase superfamily c-terminal domain XBJ1_1025 SM00729 Elongator protein 3, MiaB family, Radical SAM XBJ1_1025 SM00876 Biotin and Thiamin Synthesis associated domain XBJ1_1030 SM00382 ATPases associated with a variety of cellular activities XBJ1_1036 SM00382 ATPases associated with a variety of cellular activities XBJ1_1038 SM00855 Phosphoglycerate mutase family XBJ1_1054 SM00881 CoA binding domain XBJ1_1057 SM00861 Transketolase, pyrimidine binding domain XBJ1_1063 SM00342 helix_turn_helix, arabinose operon control protein XBJ1_1070 SM00387 Histidine kinase-like ATPases XBJ1_1070 SM00388 His Kinase A (phosphoacceptor) domain XBJ1_1071 SM00448 cheY-homologous receiver domain XBJ1_1071 SM00862 Transcriptional regulatory protein, C terminal XBJ1_1092 SM00382 ATPases associated with a variety of cellular activities XBJ1_1094 SM00382 ATPases associated with a variety of cellular activities XBJ1_1095 SM00342 helix_turn_helix, arabinose operon control protein XBJ1_1109 SM01081 Putative carbohydrate binding domain XBJ1_1121 SM00421 helix_turn_helix, Lux Regulon XBJ1_1126 SM00823 Phosphopantetheine attachment site XBJ1_1127 SM00382 ATPases associated with a variety of cellular activities XBJ1_1146 SM00382 ATPases associated with a variety of cellular activities XBJ1_1147 SM00327 von Willebrand factor (vWF) type A domain XBJ1_1152 SM00327 von Willebrand factor (vWF) type A domain XBJ1_1185 SM00530 Helix-turn-helix XRE-family like proteins XBJ1_1223 SM00635 Bacterial Ig-like domain 2 XBJ1_1227 SM01252 XBJ1_1227 XBJ1_1247 SM00530 Helix-turn-helix XRE-family like proteins XBJ1_1250 SM00382 ATPases associated with a variety of cellular activities XBJ1_1255 SM00530 Helix-turn-helix XRE-family like proteins XBJ1_1261 SM00507 HNH nucleases XBJ1_1279 SM00232 JAB/MPN domain XBJ1_1291 SM00530 Helix-turn-helix XRE-family like proteins XBJ1_1302 SM00530 Helix-turn-helix XRE-family like proteins XBJ1_1318 SM00778 Zinc-binding domain of primase-helicase XBJ1_1343 SM00382 ATPases associated with a variety of cellular activities XBJ1_1351 SM00867 YceI-like domain XBJ1_1399 SM00342 helix_turn_helix, arabinose operon control protein XBJ1_1403 SM00822 XBJ1_1403 XBJ1_1415 SM00487 DEAD-like helicases superfamily XBJ1_1416 SM00382 ATPases associated with a variety of cellular activities XBJ1_1421 SM00382 ATPases associated with a variety of cellular activities XBJ1_1430 SM01022 XBJ1_1430 XBJ1_1440 SM00923 MbtH-like protein XBJ1_1441 SM00823 Phosphopantetheine attachment site XBJ1_1441 SM00824 Thioesterase XBJ1_1442 SM00382 ATPases associated with a variety of cellular activities XBJ1_1484 SM00220 Serine/Threonine protein kinases, catalytic domain XBJ1_1486 SM00327 von Willebrand factor (vWF) type A domain XBJ1_1487 SM00382 ATPases associated with a variety of cellular activities XBJ1_1508 SM00634 Bacterial Ig-like domain (group 1) XBJ1_1548 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XBJ1_1548 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XBJ1_1548 SM00493 XBJ1_1548 XBJ1_1570 SM00862 Transcriptional regulatory protein, C terminal XBJ1_1578 SM00966 SpoVT / AbrB like domain XBJ1_1588 SM00382 ATPases associated with a variety of cellular activities XBJ1_1592 SM00244 prohibitin homologues XBJ1_1594 SM00422 helix_turn_helix, mercury resistance XBJ1_1606 SM00387 Histidine kinase-like ATPases XBJ1_1609 SM00493 XBJ1_1609 XBJ1_1611 SM00382 ATPases associated with a variety of cellular activities XBJ1_1623 SM00938 Nitrogen regulatory protein P-II XBJ1_1625 SM00382 ATPases associated with a variety of cellular activities XBJ1_1626 SM00382 ATPases associated with a variety of cellular activities XBJ1_1628 SM00344 helix_turn_helix ASNC type XBJ1_1632 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XBJ1_1634 SM00411 bacterial (prokaryotic) histone like domain XBJ1_1635 SM00382 ATPases associated with a variety of cellular activities XBJ1_1635 SM00464 Found in ATP-dependent protease La (LON) XBJ1_1636 SM00382 ATPases associated with a variety of cellular activities XBJ1_1636 SM00994 ClpX C4-type zinc finger XBJ1_1636 SM01086 C-terminal, D2-small domain, of ClpB protein XBJ1_1652 SM00636 XBJ1_1652 XBJ1_1656 SM00981 XBJ1_1656 XBJ1_1659 SM00861 Transketolase, pyrimidine binding domain XBJ1_1678 SM01323 XBJ1_1678 XBJ1_1687 SM00091 PAS domain XBJ1_1687 SM00387 Histidine kinase-like ATPases XBJ1_1687 SM00388 His Kinase A (phosphoacceptor) domain XBJ1_1688 SM00448 cheY-homologous receiver domain XBJ1_1688 SM00862 Transcriptional regulatory protein, C terminal XBJ1_1720 SM00851 MGS-like domain XBJ1_1720 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XBJ1_1721 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain XBJ1_1727 SM00904 Riboflavin kinase XBJ1_1741 SM00271 DnaJ molecular chaperone homology domain XBJ1_1767 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XBJ1_1767 SM00450 Rhodanese Homology Domain XBJ1_1768 SM00869 Autotransporter beta-domain XBJ1_1795 SM00486 DNA polymerase type-B family XBJ1_1796 SM00487 DEAD-like helicases superfamily XBJ1_1796 SM00490 helicase superfamily c-terminal domain XBJ1_1798 SM00271 DnaJ molecular chaperone homology domain XBJ1_1802 SM00650 Ribosomal RNA adenine dimethylases XBJ1_1808 SM00563 Phosphate acyltransferases XBJ1_1809 SM00434 DNA Topoisomerase IV XBJ1_1810 SM00387 Histidine kinase-like ATPases XBJ1_1810 SM00433 TopoisomeraseII XBJ1_1824 SM01118 XBJ1_1824 XBJ1_1826 SM00287 Bacterial SH3 domain homologues XBJ1_1828 SM00905 Dihydroneopterin aldolase XBJ1_1829 SM01207 XBJ1_1829 XBJ1_1833 SM00400 zinc finger XBJ1_1833 SM00493 XBJ1_1833 XBJ1_1833 SM00766 DNA primase DnaG DnaB-binding XBJ1_1848 SM00479 XBJ1_1848 XBJ1_1883 SM00778 Zinc-binding domain of primase-helicase XBJ1_1897 SM00450 Rhodanese Homology Domain XBJ1_1898 SM00421 helix_turn_helix, Lux Regulon XBJ1_1908 SM00357 Cold shock protein domain XBJ1_1921 SM00073 Histidine Phosphotransfer domain XBJ1_1921 SM00260 Two component signalling adaptor domain XBJ1_1921 SM00387 Histidine kinase-like ATPases XBJ1_1921 SM01231 XBJ1_1921 XBJ1_1922 SM00260 Two component signalling adaptor domain XBJ1_1923 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XBJ1_1923 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XBJ1_1923 SM00319 Homologues of the ligand binding domain of Tar XBJ1_1924 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XBJ1_1924 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XBJ1_1924 SM00319 Homologues of the ligand binding domain of Tar XBJ1_1925 SM00138 Methyltransferase, chemotaxis proteins XBJ1_1926 SM00448 cheY-homologous receiver domain XBJ1_1927 SM00448 cheY-homologous receiver domain XBJ1_1936 SM00857 Resolvase, N terminal domain XBJ1_1949 SM00858 XBJ1_1949 XBJ1_1960 SM00047 Lysozyme subfamily 2 XBJ1_1966 SM00823 Phosphopantetheine attachment site XBJ1_1966 SM00824 Thioesterase XBJ1_1967 SM00823 Phosphopantetheine attachment site XBJ1_1968 SM00823 Phosphopantetheine attachment site XBJ1_1988 SM00507 HNH nucleases XBJ1_2003 SM01252 XBJ1_2003 XBJ1_2020 SM00530 Helix-turn-helix XRE-family like proteins XBJ1_2025 SM00487 DEAD-like helicases superfamily XBJ1_2025 SM00490 helicase superfamily c-terminal domain XBJ1_2028 SM00778 Zinc-binding domain of primase-helicase XBJ1_2038 SM00355 zinc finger XBJ1_2040 SM00507 HNH nucleases XBJ1_2057 SM00232 JAB/MPN domain XBJ1_2067 SM00116 Domain in cystathionine beta-synthase and other proteins. XBJ1_2067 SM00924 MgtE intracellular N domain XBJ1_2079 SM00507 HNH nucleases XBJ1_2096 SM00382 ATPases associated with a variety of cellular activities XBJ1_2096 SM01086 C-terminal, D2-small domain, of ClpB protein XBJ1_2122 SM00387 Histidine kinase-like ATPases XBJ1_2123 SM00387 Histidine kinase-like ATPases XBJ1_2127 SM00345 helix_turn_helix gluconate operon transcriptional repressor XBJ1_2149 SM00634 Bacterial Ig-like domain (group 1) XBJ1_2151 SM00823 Phosphopantetheine attachment site XBJ1_2152 SM00823 Phosphopantetheine attachment site XBJ1_2153 SM00823 Phosphopantetheine attachment site XBJ1_2154 SM00382 ATPases associated with a variety of cellular activities XBJ1_2156 SM00342 helix_turn_helix, arabinose operon control protein XBJ1_2173 SM00028 Tetratricopeptide repeats XBJ1_2179 SM00382 ATPases associated with a variety of cellular activities XBJ1_2186 SM00564 beta-propeller repeat XBJ1_2197 SM00869 Autotransporter beta-domain XBJ1_2198 SM01400 XBJ1_2198 XBJ1_2202 SM00937 XBJ1_2202 XBJ1_2208 SM00195 Dual specificity phosphatase, catalytic domain XBJ1_2222 SM00836 DALR anticodon binding domain XBJ1_2222 SM01016 Arginyl tRNA synthetase N terminal dom XBJ1_2224 SM00363 S4 RNA-binding domain XBJ1_2227 SM00382 ATPases associated with a variety of cellular activities XBJ1_2237 SM00487 DEAD-like helicases superfamily XBJ1_2237 SM00491 XBJ1_2237 XBJ1_2266 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XBJ1_2267 SM00382 ATPases associated with a variety of cellular activities XBJ1_2272 SM00749 bacterial OsmY and nodulation domain XBJ1_2280 SM00481 DNA polymerase alpha chain like domain XBJ1_2282 SM00363 S4 RNA-binding domain XBJ1_2284 SM00822 XBJ1_2284 XBJ1_2289 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XBJ1_2289 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XBJ1_2289 SM00493 XBJ1_2289 XBJ1_2295 SM01321 XBJ1_2295 XBJ1_2298 SM00028 Tetratricopeptide repeats XBJ1_2299 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family XBJ1_2302 SM00357 Cold shock protein domain XBJ1_2302 SM00955 XBJ1_2302 XBJ1_2303 SM00478 endonuclease III XBJ1_2303 SM00525 XBJ1_2303 XBJ1_2305 SM00900 XBJ1_2305 XBJ1_2335 SM01022 XBJ1_2335 XBJ1_2339 SM00347 helix_turn_helix multiple antibiotic resistance protein XBJ1_2343 SM00869 Autotransporter beta-domain XBJ1_2353 SM00100 Cyclic nucleotide-monophosphate binding domain XBJ1_2353 SM00419 helix_turn_helix, cAMP Regulatory protein XBJ1_2357 SM01002 Alanine dehydrogenase/PNT, C-terminal domain XBJ1_2357 SM01003 Alanine dehydrogenase/PNT, N-terminal domain XBJ1_2367 SM00823 Phosphopantetheine attachment site XBJ1_2368 SM00382 ATPases associated with a variety of cellular activities XBJ1_2368 SM00487 DEAD-like helicases superfamily XBJ1_2368 SM00490 helicase superfamily c-terminal domain XBJ1_2368 SM00847 Helicase associated domain (HA2) Add an annotation XBJ1_2398 SM00341 Helicase and RNase D C-terminal XBJ1_2398 SM00474 3'-5' exonuclease XBJ1_2403 SM00382 ATPases associated with a variety of cellular activities XBJ1_2417 SM00155 Phospholipase D. Active site motifs. XBJ1_2419 SM00382 ATPases associated with a variety of cellular activities XBJ1_2420 SM00382 ATPases associated with a variety of cellular activities XBJ1_2432 SM00528 Domain in histone-like proteins of HNS family XBJ1_2434 SM00984 UDP binding domain XBJ1_2443 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XBJ1_2443 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XBJ1_2443 SM00493 XBJ1_2443 XBJ1_2448 SM00870 XBJ1_2448 XBJ1_2452 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XBJ1_2455 SM01005 Alanine racemase, C-terminal domain XBJ1_2457 SM00345 helix_turn_helix gluconate operon transcriptional repressor XBJ1_2469 SM00382 ATPases associated with a variety of cellular activities XBJ1_2475 SM00382 ATPases associated with a variety of cellular activities XBJ1_2479 SM00382 ATPases associated with a variety of cellular activities XBJ1_2480 SM00382 ATPases associated with a variety of cellular activities XBJ1_2486 SM00363 S4 RNA-binding domain XBJ1_2490 SM00347 helix_turn_helix multiple antibiotic resistance protein XBJ1_2492 SM00479 XBJ1_2492 XBJ1_2496 SM00354 helix_turn _helix lactose operon repressor XBJ1_2506 SM00257 Lysin motif XBJ1_2517 SM00382 ATPases associated with a variety of cellular activities XBJ1_2521 SM00342 helix_turn_helix, arabinose operon control protein XBJ1_2537 SM00382 ATPases associated with a variety of cellular activities XBJ1_2539 SM00411 bacterial (prokaryotic) histone like domain XBJ1_2540 SM00873 B3/4 domain XBJ1_2540 SM00874 tRNA synthetase B5 domain XBJ1_2540 SM00896 Ferredoxin-fold anticodon binding domain XBJ1_2545 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XBJ1_2551 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XBJ1_2551 SM00245 tail specific protease XBJ1_2552 SM00945 ProQ/FINO family XBJ1_2553 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XBJ1_2575 SM00869 Autotransporter beta-domain XBJ1_2584 SM00116 Domain in cystathionine beta-synthase and other proteins. XBJ1_2584 SM01240 XBJ1_2584 XBJ1_2590 SM00919 Malic enzyme, NAD binding domain XBJ1_2590 SM01274 XBJ1_2590 XBJ1_2592 SM00421 helix_turn_helix, Lux Regulon XBJ1_2592 SM00448 cheY-homologous receiver domain XBJ1_2630 SM01130 XBJ1_2630 XBJ1_2668 SM00778 Zinc-binding domain of primase-helicase XBJ1_2668 SM00885 D5 N terminal like XBJ1_2675 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XBJ1_2675 SM00465 GIY-YIG type nucleases (URI domain) XBJ1_2676 SM00421 helix_turn_helix, Lux Regulon XBJ1_2676 SM00448 cheY-homologous receiver domain XBJ1_2679 SM01321 XBJ1_2679 XBJ1_2689 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XBJ1_2690 SM00822 XBJ1_2690 XBJ1_2690 SM00825 Beta-ketoacyl synthase XBJ1_2691 SM00823 Phosphopantetheine attachment site XBJ1_2693 SM00382 ATPases associated with a variety of cellular activities XBJ1_2694 SM00822 XBJ1_2694 XBJ1_2694 SM00823 Phosphopantetheine attachment site XBJ1_2694 SM00825 Beta-ketoacyl synthase XBJ1_2694 SM00826 XBJ1_2694 XBJ1_2694 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. XBJ1_2694 SM00829 Enoylreductase XBJ1_2695 SM00823 Phosphopantetheine attachment site XBJ1_2696 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. XBJ1_2707 SM00382 ATPases associated with a variety of cellular activities XBJ1_2718 SM00822 XBJ1_2718 XBJ1_2728 SM00869 Autotransporter beta-domain XBJ1_2733 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XBJ1_2733 SM00387 Histidine kinase-like ATPases XBJ1_2733 SM00388 His Kinase A (phosphoacceptor) domain XBJ1_2734 SM00448 cheY-homologous receiver domain XBJ1_2734 SM00862 Transcriptional regulatory protein, C terminal XBJ1_2741 SM00357 Cold shock protein domain XBJ1_2745 SM00342 helix_turn_helix, arabinose operon control protein XBJ1_2746 SM00644 XBJ1_2746 XBJ1_2754 SM00248 ankyrin repeats XBJ1_2784 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XBJ1_2804 SM00830 Chorismate mutase type II XBJ1_2828 SM01329 XBJ1_2828 XBJ1_2835 SM00448 cheY-homologous receiver domain XBJ1_2835 SM00862 Transcriptional regulatory protein, C terminal XBJ1_2836 SM00387 Histidine kinase-like ATPases XBJ1_2837 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XBJ1_2840 SM00382 ATPases associated with a variety of cellular activities XBJ1_2843 SM00487 DEAD-like helicases superfamily XBJ1_2843 SM00490 helicase superfamily c-terminal domain XBJ1_2843 SM00982 XBJ1_2843 XBJ1_2843 SM01058 CarD-like/TRCF domain XBJ1_2855 SM00825 Beta-ketoacyl synthase XBJ1_2859 SM00822 XBJ1_2859 XBJ1_2860 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. XBJ1_2866 SM00363 S4 RNA-binding domain XBJ1_2867 SM00316 Ribosomal protein S1-like RNA-binding domain XBJ1_2870 SM00479 XBJ1_2870 XBJ1_2876 SM00382 ATPases associated with a variety of cellular activities XBJ1_2883 SM00518 AP endonuclease family 2 XBJ1_2888 SM00841 Elongation factor P, C-terminal XBJ1_2888 SM01185 XBJ1_2888 XBJ1_2892 SM00014 Acid phosphatase homologues XBJ1_2896 SM00363 S4 RNA-binding domain XBJ1_2897 SM00487 DEAD-like helicases superfamily XBJ1_2897 SM00490 helicase superfamily c-terminal domain XBJ1_2907 SM00530 Helix-turn-helix XRE-family like proteins XBJ1_2919 SM00926 Molybdopterin oxidoreductase Fe4S4 domain XBJ1_2919 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XBJ1_2920 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XBJ1_2930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XBJ1_2943 SM00382 ATPases associated with a variety of cellular activities XBJ1_2945 SM00382 ATPases associated with a variety of cellular activities XBJ1_2952 SM00825 Beta-ketoacyl synthase XBJ1_2953 SM00822 XBJ1_2953 XBJ1_2953 SM00825 Beta-ketoacyl synthase XBJ1_2953 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. XBJ1_2966 SM00859 Semialdehyde dehydrogenase, NAD binding domain XBJ1_2972 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XBJ1_2972 SM00387 Histidine kinase-like ATPases XBJ1_2972 SM00388 His Kinase A (phosphoacceptor) domain XBJ1_2973 SM00448 cheY-homologous receiver domain XBJ1_2973 SM00862 Transcriptional regulatory protein, C terminal XBJ1_2975 SM00825 Beta-ketoacyl synthase XBJ1_2986 SM00345 helix_turn_helix gluconate operon transcriptional repressor XBJ1_2986 SM00866 XBJ1_2986 XBJ1_2989 SM00463 Small MutS-related domain XBJ1_2990 SM00855 Phosphoglycerate mutase family XBJ1_3004 SM00564 beta-propeller repeat XBJ1_3008 SM00530 Helix-turn-helix XRE-family like proteins XBJ1_3010 SM00028 Tetratricopeptide repeats XBJ1_3013 SM00562 XBJ1_3013 XBJ1_3015 SM00530 Helix-turn-helix XRE-family like proteins XBJ1_3019 SM01359 XBJ1_3019 XBJ1_3019 SM01360 XBJ1_3019 XBJ1_3025 SM00271 DnaJ molecular chaperone homology domain XBJ1_3035 SM00938 Nitrogen regulatory protein P-II XBJ1_3037 SM00382 ATPases associated with a variety of cellular activities XBJ1_3037 SM00448 cheY-homologous receiver domain XBJ1_3039 SM00387 Histidine kinase-like ATPases XBJ1_3039 SM00388 His Kinase A (phosphoacceptor) domain XBJ1_3040 SM01211 XBJ1_3040 XBJ1_3041 SM00062 Bacterial periplasmic substrate-binding proteins XBJ1_3043 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XBJ1_3045 SM00478 endonuclease III XBJ1_3071 SM00257 Lysin motif XBJ1_3072 SM00849 Metallo-beta-lactamase superfamily XBJ1_3075 SM00479 XBJ1_3075 XBJ1_3080 SM00861 Transketolase, pyrimidine binding domain XBJ1_3081 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XBJ1_3090 SM00421 helix_turn_helix, Lux Regulon XBJ1_3090 SM00448 cheY-homologous receiver domain XBJ1_3093 SM00840 XBJ1_3093 XBJ1_3096 SM01001 AIR carboxylase XBJ1_3119 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XBJ1_3119 SM00292 breast cancer carboxy-terminal domain XBJ1_3119 SM00532 Ligase N family XBJ1_3120 SM00771 ZipA, C-terminal domain (FtsZ-binding) XBJ1_3129 SM00382 ATPases associated with a variety of cellular activities XBJ1_3148 SM00358 Double-stranded RNA binding motif XBJ1_3148 SM00535 Ribonuclease III family XBJ1_3156 SM00487 DEAD-like helicases superfamily XBJ1_3156 SM00490 helicase superfamily c-terminal domain XBJ1_3158 SM00986 Uracil DNA glycosylase superfamily XBJ1_3158 SM00987 UreE urease accessory protein, C-terminal domain XBJ1_3184 SM01321 XBJ1_3184 XBJ1_3197 SM00729 Elongator protein 3, MiaB family, Radical SAM XBJ1_3200 SM00116 Domain in cystathionine beta-synthase and other proteins. XBJ1_3200 SM01091 Transporter associated domain XBJ1_3202 SM00062 Bacterial periplasmic substrate-binding proteins XBJ1_3205 SM00382 ATPases associated with a variety of cellular activities XBJ1_3215 SM00936 Penicillin-binding protein 5, C-terminal domain XBJ1_3219 SM00729 Elongator protein 3, MiaB family, Radical SAM XBJ1_3221 SM00357 Cold shock protein domain XBJ1_3226 SM00382 ATPases associated with a variety of cellular activities XBJ1_3232 SM00347 helix_turn_helix multiple antibiotic resistance protein XBJ1_3238 SM01006 Siderophore biosynthesis protein domain XBJ1_3241 SM00382 ATPases associated with a variety of cellular activities XBJ1_3248 SM00967 RNA 2'-O ribose methyltransferase substrate binding XBJ1_3249 SM01144 XBJ1_3249 XBJ1_3250 SM00881 CoA binding domain XBJ1_3251 SM00155 Phospholipase D. Active site motifs. XBJ1_3257 SM00382 ATPases associated with a variety of cellular activities XBJ1_3257 SM01086 C-terminal, D2-small domain, of ClpB protein XBJ1_3259 SM00363 S4 RNA-binding domain XBJ1_3262 SM00830 Chorismate mutase type II XBJ1_3263 SM00830 Chorismate mutase type II XBJ1_3270 SM00382 ATPases associated with a variety of cellular activities XBJ1_3270 SM00962 SRP54-type protein, GTPase domain XBJ1_3270 SM00963 SRP54-type protein, helical bundle domain XBJ1_3272 SM01091 Transporter associated domain XBJ1_3286 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XBJ1_3287 SM00382 ATPases associated with a variety of cellular activities XBJ1_3293 SM00563 Phosphate acyltransferases XBJ1_3296 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase XBJ1_3322 SM00900 XBJ1_3322 XBJ1_3334 SM00849 Metallo-beta-lactamase superfamily XBJ1_3335 SM00849 Metallo-beta-lactamase superfamily XBJ1_3340 SM00732 Likely ribonuclease with RNase H fold. XBJ1_3346 SM00729 Elongator protein 3, MiaB family, Radical SAM XBJ1_3352 SM00478 endonuclease III XBJ1_3352 SM00525 XBJ1_3352 XBJ1_3365 SM00778 Zinc-binding domain of primase-helicase XBJ1_3377 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XBJ1_3377 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XBJ1_3377 SM00493 XBJ1_3377 XBJ1_3402 SM00634 Bacterial Ig-like domain (group 1) XBJ1_3422 SM00937 XBJ1_3422 XBJ1_3439 SM01011 Aminopeptidase P, N-terminal domain XBJ1_3456 SM00345 helix_turn_helix gluconate operon transcriptional repressor XBJ1_3456 SM00895 XBJ1_3456 XBJ1_3458 SM00644 XBJ1_3458 XBJ1_3460 SM00382 ATPases associated with a variety of cellular activities XBJ1_3466 SM00382 ATPases associated with a variety of cellular activities XBJ1_3467 SM00957 SecA DEAD-like domain XBJ1_3467 SM00958 SecA preprotein cross-linking domain XBJ1_3471 SM00864 Tubulin/FtsZ family, GTPase domain XBJ1_3471 SM00865 Tubulin/FtsZ family, C-terminal domain XBJ1_3472 SM00842 Cell division protein FtsA XBJ1_3486 SM00354 helix_turn _helix lactose operon repressor XBJ1_3493 SM00917 LeuA allosteric (dimerisation) domain XBJ1_3494 SM01329 XBJ1_3494 XBJ1_3495 SM00927 DNA mismatch repair enzyme MutH XBJ1_3501 SM00116 Domain in cystathionine beta-synthase and other proteins. XBJ1_3510 SM00852 Probable molybdopterin binding domain XBJ1_3517 SM00448 cheY-homologous receiver domain XBJ1_3517 SM00862 Transcriptional regulatory protein, C terminal XBJ1_3520 SM00342 helix_turn_helix, arabinose operon control protein XBJ1_3520 SM00871 Bacterial transcription activator, effector binding domain XBJ1_3521 SM00855 Phosphoglycerate mutase family XBJ1_3525 SM00382 ATPases associated with a variety of cellular activities XBJ1_3527 SM00530 Helix-turn-helix XRE-family like proteins XBJ1_3528 SM00382 ATPases associated with a variety of cellular activities XBJ1_3533 SM00530 Helix-turn-helix XRE-family like proteins XBJ1_3541 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain XBJ1_3542 SM01133 XBJ1_3542 XBJ1_3548 SM00749 bacterial OsmY and nodulation domain XBJ1_3560 SM00530 Helix-turn-helix XRE-family like proteins XBJ1_3567 SM00841 Elongation factor P, C-terminal XBJ1_3567 SM01185 XBJ1_3567 XBJ1_3571 SM00883 Chaperonin 10 Kd subunit XBJ1_3575 SM00357 Cold shock protein domain XBJ1_3579 SM00533 DNA-binding domain of DNA mismatch repair MUTS family XBJ1_3579 SM00534 ATPase domain of DNA mismatch repair MUTS family XBJ1_3582 SM00257 Lysin motif XBJ1_3599 SM00903 Flavin reductase like domain XBJ1_3622 SM00833 Cobalamin synthesis protein cobW C-terminal domain XBJ1_3631 SM00382 ATPases associated with a variety of cellular activities XBJ1_3644 SM00731 SprT homologues. XBJ1_3651 SM01192 XBJ1_3651 XBJ1_3651 SM01193 XBJ1_3651 XBJ1_3654 SM00954 Region found in RelA / SpoT proteins XBJ1_3656 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XBJ1_3656 SM00387 Histidine kinase-like ATPases XBJ1_3656 SM00388 His Kinase A (phosphoacceptor) domain XBJ1_3656 SM00448 cheY-homologous receiver domain XBJ1_3657 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XBJ1_3665 SM00490 helicase superfamily c-terminal domain XBJ1_3665 SM00847 Helicase associated domain (HA2) Add an annotation XBJ1_3680 SM00382 ATPases associated with a variety of cellular activities XBJ1_3681 SM00947 Carbonic anhydrase XBJ1_3685 SM00382 ATPases associated with a variety of cellular activities XBJ1_3689 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XBJ1_3703 SM00646 XBJ1_3703 XBJ1_3706 SM00925 MltA specific insert domain XBJ1_3711 SM00047 Lysozyme subfamily 2 XBJ1_3724 SM00354 helix_turn _helix lactose operon repressor XBJ1_3725 SM00354 helix_turn _helix lactose operon repressor XBJ1_3749 SM00487 DEAD-like helicases superfamily XBJ1_3754 SM01101 XBJ1_3754 XBJ1_3763 SM00347 helix_turn_helix multiple antibiotic resistance protein XBJ1_3797 SM00878 Biotin carboxylase C-terminal domain XBJ1_3800 SM00829 Enoylreductase XBJ1_3806 SM00316 Ribosomal protein S1-like RNA-binding domain XBJ1_3817 SM01005 Alanine racemase, C-terminal domain XBJ1_3824 SM00382 ATPases associated with a variety of cellular activities XBJ1_3828 SM00116 Domain in cystathionine beta-synthase and other proteins. XBJ1_3830 SM00382 ATPases associated with a variety of cellular activities XBJ1_3838 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XBJ1_3839 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XBJ1_3853 SM00073 Histidine Phosphotransfer domain XBJ1_3853 SM00091 PAS domain XBJ1_3853 SM00387 Histidine kinase-like ATPases XBJ1_3853 SM00388 His Kinase A (phosphoacceptor) domain XBJ1_3853 SM00448 cheY-homologous receiver domain XBJ1_3857 SM00749 bacterial OsmY and nodulation domain XBJ1_3883 SM00320 WD40 repeats XBJ1_3885 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XBJ1_3885 SM00450 Rhodanese Homology Domain XBJ1_3890 SM00342 helix_turn_helix, arabinose operon control protein XBJ1_3894 SM00825 Beta-ketoacyl synthase XBJ1_3896 SM00829 Enoylreductase XBJ1_3912 SM01005 Alanine racemase, C-terminal domain XBJ1_3913 SM00382 ATPases associated with a variety of cellular activities XBJ1_3920 SM00671 Sel1-like repeats. XBJ1_3924 SM00829 Enoylreductase XBJ1_3935 SM00232 JAB/MPN domain XBJ1_3970 SM00778 Zinc-binding domain of primase-helicase XBJ1_3971 SM00487 DEAD-like helicases superfamily XBJ1_3971 SM00490 helicase superfamily c-terminal domain XBJ1_3989 SM01252 XBJ1_3989 XBJ1_3999 SM00563 Phosphate acyltransferases XBJ1_4004 SM00346 helix_turn_helix isocitrate lyase regulation XBJ1_4018 SM00798 AICARFT/IMPCHase bienzyme XBJ1_4018 SM00851 MGS-like domain XBJ1_4019 SM01209 XBJ1_4019 XBJ1_4019 SM01210 XBJ1_4019 XBJ1_4021 SM00411 bacterial (prokaryotic) histone like domain XBJ1_4033 SM00876 Biotin and Thiamin Synthesis associated domain XBJ1_4037 SM00829 Enoylreductase XBJ1_4039 SM00421 helix_turn_helix, Lux Regulon XBJ1_4048 SM00382 ATPases associated with a variety of cellular activities XBJ1_4052 SM00287 Bacterial SH3 domain homologues XBJ1_4053 SM00663 RNA polymerase I subunit A N-terminus XBJ1_4058 SM00649 Ribosomal protein L11/L12 XBJ1_4059 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. XBJ1_4059 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. XBJ1_4063 SM00838 Elongation factor G C-terminus XBJ1_4063 SM00889 Elongation factor G, domain IV XBJ1_4077 SM00382 ATPases associated with a variety of cellular activities XBJ1_4089 SM00100 Cyclic nucleotide-monophosphate binding domain XBJ1_4089 SM00419 helix_turn_helix, cAMP Regulatory protein XBJ1_4096 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs XBJ1_4096 SM00474 3'-5' exonuclease XBJ1_4096 SM00475 5'-3' exonuclease XBJ1_4096 SM00482 DNA polymerase A domain XBJ1_4104 SM01133 XBJ1_4104 XBJ1_4127 SM00345 helix_turn_helix gluconate operon transcriptional repressor XBJ1_4132 SM00479 XBJ1_4132 XBJ1_4144 SM00341 Helicase and RNase D C-terminal XBJ1_4144 SM00487 DEAD-like helicases superfamily XBJ1_4144 SM00490 helicase superfamily c-terminal domain XBJ1_4144 SM00956 XBJ1_4144 XBJ1_4157 SM01219 XBJ1_4157 XBJ1_4175 SM00984 UDP binding domain XBJ1_4179 SM00357 Cold shock protein domain XBJ1_4179 SM00382 ATPases associated with a variety of cellular activities XBJ1_4179 SM00959 Rho termination factor, N-terminal domain XBJ1_4184 SM00487 DEAD-like helicases superfamily XBJ1_4184 SM00490 helicase superfamily c-terminal domain XBJ1_4196 SM00382 ATPases associated with a variety of cellular activities XBJ1_4215 SM00422 helix_turn_helix, mercury resistance XBJ1_4217 SM00662 RNA polymerases D XBJ1_4218 SM00363 S4 RNA-binding domain XBJ1_4218 SM01390 XBJ1_4218 XBJ1_4230 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. XBJ1_4231 SM01374 XBJ1_4231 XBJ1_4235 SM00322 K homology RNA-binding domain XBJ1_4238 SM01382 XBJ1_4238 XBJ1_4238 SM01383 XBJ1_4238 XBJ1_4242 SM01403 XBJ1_4242 XBJ1_4271 SM00859 Semialdehyde dehydrogenase, NAD binding domain XBJ1_4280 SM00487 DEAD-like helicases superfamily XBJ1_4280 SM00490 helicase superfamily c-terminal domain XBJ1_4282 SM00354 helix_turn _helix lactose operon repressor XBJ1_4285 SM00382 ATPases associated with a variety of cellular activities XBJ1_4285 SM01086 C-terminal, D2-small domain, of ClpB protein XBJ1_4305 SM00563 Phosphate acyltransferases XBJ1_4311 SM00448 cheY-homologous receiver domain XBJ1_4311 SM00862 Transcriptional regulatory protein, C terminal XBJ1_4312 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XBJ1_4312 SM00387 Histidine kinase-like ATPases XBJ1_4312 SM00388 His Kinase A (phosphoacceptor) domain XBJ1_4313 SM00984 UDP binding domain XBJ1_4328 SM00984 UDP binding domain XBJ1_4330 SM00971 Serine acetyltransferase, N-terminal XBJ1_4333 SM00450 Rhodanese Homology Domain XBJ1_4336 SM00829 Enoylreductase XBJ1_4352 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain XBJ1_4352 SM01232 XBJ1_4352 XBJ1_4376 SM00778 Zinc-binding domain of primase-helicase XBJ1_4389 SM00345 helix_turn_helix gluconate operon transcriptional repressor XBJ1_4389 SM00866 XBJ1_4389 XBJ1_4411 SM01234 XBJ1_4411