XDD1_1293 e722f9e30a54a8587014d34f82d81523 476 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 6 442 1.2E-206 T 15-10-2018 XDD1_1293 e722f9e30a54a8587014d34f82d81523 476 Gene3D G3DSA:3.80.30.20 147 379 1.0E-81 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe XDD1_1293 e722f9e30a54a8587014d34f82d81523 476 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 5 442 73.43 T 15-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 XDD1_1293 e722f9e30a54a8587014d34f82d81523 476 SMART SM00729 149 369 1.8E-62 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 XDD1_1293 e722f9e30a54a8587014d34f82d81523 476 Pfam PF00919 Uncharacterized protein family UPF0004 6 106 1.4E-28 T 15-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 XDD1_1293 e722f9e30a54a8587014d34f82d81523 476 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 6 439 7.5E-153 T 15-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 XDD1_1293 e722f9e30a54a8587014d34f82d81523 476 Pfam PF01938 TRAM domain 380 442 9.1E-20 T 15-10-2018 IPR002792 TRAM domain XDD1_1293 e722f9e30a54a8587014d34f82d81523 476 Pfam PF04055 Radical SAM superfamily 153 327 4.9E-26 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XDD1_1293 e722f9e30a54a8587014d34f82d81523 476 SUPERFAMILY SSF102114 129 374 3.53E-62 T 15-10-2018 XDD1_1293 e722f9e30a54a8587014d34f82d81523 476 Gene3D G3DSA:3.40.50.12160 5 138 1.8E-32 T 15-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily XDD1_1293 e722f9e30a54a8587014d34f82d81523 476 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 153 173 - T 15-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 XDD1_2520 7227ae4a598e3dae39546013ab8237fc 361 Pfam PF01497 Periplasmic binding protein 81 305 4.8E-22 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain XDD1_2520 7227ae4a598e3dae39546013ab8237fc 361 Gene3D G3DSA:3.40.50.1980 15 360 3.1E-106 T 15-10-2018 XDD1_2520 7227ae4a598e3dae39546013ab8237fc 361 SUPERFAMILY SSF53807 18 351 9.03E-51 T 15-10-2018 XDD1_2686 8bca48a0389a35d96586ddbc3da6264b 412 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 88 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 XDD1_2686 8bca48a0389a35d96586ddbc3da6264b 412 SUPERFAMILY SSF103473 5 403 1.7E-46 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_2686 8bca48a0389a35d96586ddbc3da6264b 412 Pfam PF07690 Major Facilitator Superfamily 12 369 6.3E-38 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_2686 8bca48a0389a35d96586ddbc3da6264b 412 Gene3D G3DSA:1.20.1250.20 2 403 8.0E-50 T 15-10-2018 XDD1_2686 8bca48a0389a35d96586ddbc3da6264b 412 PRINTS PR01035 Tetracycline resistance protein signature 265 285 5.2E-6 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 XDD1_2686 8bca48a0389a35d96586ddbc3da6264b 412 PRINTS PR01035 Tetracycline resistance protein signature 17 33 5.2E-6 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 XDD1_3947 9fe93b75dbf22e78a56439bac933d83d 327 SUPERFAMILY SSF53098 169 319 1.97E-26 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3947 9fe93b75dbf22e78a56439bac933d83d 327 Gene3D G3DSA:3.30.420.10 163 324 2.4E-10 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_3947 9fe93b75dbf22e78a56439bac933d83d 327 Pfam PF00665 Integrase core domain 171 273 2.2E-12 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_3947 9fe93b75dbf22e78a56439bac933d83d 327 Pfam PF13936 Helix-turn-helix domain 3 45 6.5E-15 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_3947 9fe93b75dbf22e78a56439bac933d83d 327 SUPERFAMILY SSF46689 5 116 1.25E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0900 3ebc1e4ddf294ea5696b52d972087c46 1126 SUPERFAMILY SSF82689 1017 1117 5.23E-25 T 15-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 XDD1_0900 3ebc1e4ddf294ea5696b52d972087c46 1126 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 979 1013 - T 15-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 XDD1_0900 3ebc1e4ddf294ea5696b52d972087c46 1126 Pfam PF00924 Mechanosensitive ion channel 907 1106 4.1E-58 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 XDD1_0900 3ebc1e4ddf294ea5696b52d972087c46 1126 Gene3D G3DSA:3.30.70.100 1018 1111 3.9E-20 T 15-10-2018 XDD1_0900 3ebc1e4ddf294ea5696b52d972087c46 1126 SUPERFAMILY SSF82861 864 948 1.06E-8 T 15-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 XDD1_0900 3ebc1e4ddf294ea5696b52d972087c46 1126 Gene3D G3DSA:2.30.30.60 965 1014 1.8E-12 T 15-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily XDD1_0900 3ebc1e4ddf294ea5696b52d972087c46 1126 Pfam PF12795 Mechanosensitive ion channel porin domain 63 302 2.5E-54 T 15-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain XDD1_0900 3ebc1e4ddf294ea5696b52d972087c46 1126 SUPERFAMILY SSF50182 950 1015 3.2E-16 T 15-10-2018 IPR010920 LSM domain superfamily XDD1_0900 3ebc1e4ddf294ea5696b52d972087c46 1126 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 530 846 9.3E-94 T 15-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 SUPERFAMILY SSF81901 132 294 2.96E-45 T 15-10-2018 XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 Pfam PF08238 Sel1 repeat 397 429 1.0E-10 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 Pfam PF08238 Sel1 repeat 252 286 4.9E-7 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 Pfam PF08238 Sel1 repeat 81 116 9.2E-11 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 Pfam PF08238 Sel1 repeat 287 322 2.8E-11 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 Pfam PF08238 Sel1 repeat 360 393 2.5E-7 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 Pfam PF08238 Sel1 repeat 181 214 5.0E-10 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 Pfam PF08238 Sel1 repeat 144 178 2.1E-9 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 Pfam PF08238 Sel1 repeat 217 250 2.0E-11 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 Pfam PF08238 Sel1 repeat 325 358 5.6E-9 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 Pfam PF08238 Sel1 repeat 45 80 4.8E-9 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 SUPERFAMILY SSF81901 269 433 2.27E-51 T 15-10-2018 XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 SUPERFAMILY SSF81901 33 127 9.81E-29 T 15-10-2018 XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 SMART SM00671 215 250 1.9E-8 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 SMART SM00671 395 430 2.0E-12 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 SMART SM00671 323 358 2.4E-9 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 SMART SM00671 179 214 1.9E-11 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 SMART SM00671 287 322 3.9E-12 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 SMART SM00671 251 286 1.6E-7 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 SMART SM00671 143 178 5.0E-12 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 SMART SM00671 81 116 5.7E-13 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 SMART SM00671 359 394 1.6E-7 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 SMART SM00671 45 80 6.0E-11 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 Gene3D G3DSA:1.25.40.10 340 434 2.0E-30 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 Gene3D G3DSA:1.25.40.10 211 326 3.3E-42 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 Gene3D G3DSA:1.25.40.10 130 210 1.9E-29 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_3378 8cf0d82a82d6a58e9f179ff106c3575a 446 Gene3D G3DSA:1.25.40.10 24 129 2.6E-33 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_0108 00bae0a3e9c921e6321cb0aa0c468326 274 Gene3D G3DSA:3.40.190.290 66 270 7.0E-52 T 15-10-2018 XDD1_0108 00bae0a3e9c921e6321cb0aa0c468326 274 SUPERFAMILY SSF46785 1 58 1.36E-12 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_0108 00bae0a3e9c921e6321cb0aa0c468326 274 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 37 4.0E-11 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0108 00bae0a3e9c921e6321cb0aa0c468326 274 SUPERFAMILY SSF53850 64 272 1.79E-39 T 15-10-2018 XDD1_0108 00bae0a3e9c921e6321cb0aa0c468326 274 Gene3D G3DSA:1.10.10.10 1 64 4.3E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0108 00bae0a3e9c921e6321cb0aa0c468326 274 Pfam PF03466 LysR substrate binding domain 64 271 1.8E-36 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_1365 ae3f6778d0874bee0a99faa36732e4d1 256 PIRSF PIRSF004846 3 256 2.3E-74 T 15-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 XDD1_1365 ae3f6778d0874bee0a99faa36732e4d1 256 Gene3D G3DSA:3.40.190.10 29 253 2.6E-82 T 15-10-2018 XDD1_1365 ae3f6778d0874bee0a99faa36732e4d1 256 Gene3D G3DSA:3.40.190.10 106 217 2.6E-82 T 15-10-2018 XDD1_1365 ae3f6778d0874bee0a99faa36732e4d1 256 SUPERFAMILY SSF53850 26 255 1.2E-66 T 15-10-2018 XDD1_1365 ae3f6778d0874bee0a99faa36732e4d1 256 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 33 252 2.9E-73 T 15-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 XDD1_1365 ae3f6778d0874bee0a99faa36732e4d1 256 Pfam PF13531 Bacterial extracellular solute-binding protein 28 253 1.1E-46 T 15-10-2018 XDD1_2194 b0cf8ae34a023c3b0d9651ac18fa856f 210 SUPERFAMILY SSF48150 2 208 9.42E-73 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 XDD1_2194 b0cf8ae34a023c3b0d9651ac18fa856f 210 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.245 T 15-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 XDD1_2194 b0cf8ae34a023c3b0d9651ac18fa856f 210 Gene3D G3DSA:1.10.340.30 21 132 2.0E-77 T 15-10-2018 XDD1_2194 b0cf8ae34a023c3b0d9651ac18fa856f 210 SMART SM00478 38 185 1.4E-54 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XDD1_2194 b0cf8ae34a023c3b0d9651ac18fa856f 210 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 15-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 XDD1_2194 b0cf8ae34a023c3b0d9651ac18fa856f 210 TIGRFAM TIGR01083 nth: endonuclease III 4 194 2.4E-89 T 15-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 XDD1_2194 b0cf8ae34a023c3b0d9651ac18fa856f 210 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 15-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 XDD1_2194 b0cf8ae34a023c3b0d9651ac18fa856f 210 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 15-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 XDD1_2194 b0cf8ae34a023c3b0d9651ac18fa856f 210 Gene3D G3DSA:1.10.1670.10 11 203 2.0E-77 T 15-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 XDD1_2194 b0cf8ae34a023c3b0d9651ac18fa856f 210 Pfam PF00633 Helix-hairpin-helix motif 99 127 1.6E-7 T 15-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 XDD1_2194 b0cf8ae34a023c3b0d9651ac18fa856f 210 PIRSF PIRSF001435 1 210 4.3E-52 T 15-10-2018 XDD1_2194 b0cf8ae34a023c3b0d9651ac18fa856f 210 SMART SM00525 186 206 1.1E-4 T 15-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 XDD1_2194 b0cf8ae34a023c3b0d9651ac18fa856f 210 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 167 5.1E-20 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XDD1_2639 a4592589b2c24f50ad80c95b1dedbc96 692 Gene3D G3DSA:3.40.50.150 19 259 3.6E-111 T 15-10-2018 XDD1_2639 a4592589b2c24f50ad80c95b1dedbc96 692 Gene3D G3DSA:3.50.50.60 279 681 1.3E-144 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_2639 a4592589b2c24f50ad80c95b1dedbc96 692 SUPERFAMILY SSF51905 279 684 2.98E-34 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_2639 a4592589b2c24f50ad80c95b1dedbc96 692 SUPERFAMILY SSF53335 66 250 5.11E-5 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_2639 a4592589b2c24f50ad80c95b1dedbc96 692 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 279 684 1.6E-159 T 15-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 XDD1_2639 a4592589b2c24f50ad80c95b1dedbc96 692 Gene3D G3DSA:3.30.9.10 364 589 1.3E-144 T 15-10-2018 XDD1_2639 a4592589b2c24f50ad80c95b1dedbc96 692 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 128 254 2.2E-47 T 15-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 XDD1_2639 a4592589b2c24f50ad80c95b1dedbc96 692 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 17 679 28.133 T 15-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 XDD1_2639 a4592589b2c24f50ad80c95b1dedbc96 692 Pfam PF01266 FAD dependent oxidoreductase 279 654 1.3E-51 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 SUPERFAMILY SSF100920 384 540 2.75E-60 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 Gene3D G3DSA:1.20.1270.10 524 603 6.8E-27 T 15-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 3.3E-288 T 15-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 SUPERFAMILY SSF53067 187 382 3.37E-67 T 15-10-2018 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.754 T 15-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 PRINTS PR00301 70kDa heat shock protein signature 469 485 3.2E-80 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 PRINTS PR00301 70kDa heat shock protein signature 138 158 3.2E-80 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 PRINTS PR00301 70kDa heat shock protein signature 198 208 3.2E-80 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 PRINTS PR00301 70kDa heat shock protein signature 365 385 3.2E-80 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.2E-80 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 PRINTS PR00301 70kDa heat shock protein signature 334 350 3.2E-80 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.2E-80 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.2E-80 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 PRINTS PR00301 70kDa heat shock protein signature 388 407 3.2E-80 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 Pfam PF00012 Hsp70 protein 4 601 5.1E-264 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 SUPERFAMILY SSF53067 4 183 1.59E-65 T 15-10-2018 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 Gene3D G3DSA:2.60.34.10 383 523 2.5E-66 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 Gene3D G3DSA:3.30.420.40 5 379 5.2E-171 T 15-10-2018 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 Gene3D G3DSA:3.90.640.10 229 316 5.2E-171 T 15-10-2018 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 SUPERFAMILY SSF100934 535 606 1.18E-5 T 15-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 Gene3D G3DSA:3.30.420.40 180 366 5.2E-171 T 15-10-2018 XDD1_0760 000dda6e8949425603dcba1c74c38c64 636 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 XDD1_3819 d00248c0da18f72f57f3eb881bb63445 1503 SUPERFAMILY SSF49373 577 670 1.24E-8 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments XDD1_3819 d00248c0da18f72f57f3eb881bb63445 1503 SUPERFAMILY SSF49373 709 801 1.02E-5 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments XDD1_3819 d00248c0da18f72f57f3eb881bb63445 1503 Gene3D G3DSA:2.40.160.160 108 353 5.1E-104 T 15-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily XDD1_3819 d00248c0da18f72f57f3eb881bb63445 1503 Gene3D G3DSA:2.60.40.10 580 689 1.7E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_3819 d00248c0da18f72f57f3eb881bb63445 1503 Gene3D G3DSA:2.60.40.10 704 805 1.7E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_3819 d00248c0da18f72f57f3eb881bb63445 1503 Gene3D G3DSA:2.60.40.10 915 1020 2.2E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_3819 d00248c0da18f72f57f3eb881bb63445 1503 Gene3D G3DSA:2.60.40.10 815 914 1.1E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_3819 d00248c0da18f72f57f3eb881bb63445 1503 PRINTS PR01369 Intimin signature 198 213 4.4E-8 T 15-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 XDD1_3819 d00248c0da18f72f57f3eb881bb63445 1503 PRINTS PR01369 Intimin signature 226 245 4.4E-8 T 15-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 XDD1_3819 d00248c0da18f72f57f3eb881bb63445 1503 PRINTS PR01369 Intimin signature 294 313 4.4E-8 T 15-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 XDD1_3819 d00248c0da18f72f57f3eb881bb63445 1503 SUPERFAMILY SSF49373 822 912 4.45E-5 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments XDD1_3819 d00248c0da18f72f57f3eb881bb63445 1503 Pfam PF11924 Inverse autotransporter, beta-domain 71 346 9.3E-109 T 15-10-2018 IPR024519 Inverse autotransporter, beta-domain XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 Pfam PF05192 MutS domain III 279 566 4.3E-41 T 15-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 Gene3D G3DSA:3.30.420.110 137 272 8.2E-36 T 15-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 SUPERFAMILY SSF48334 277 573 2.35E-90 T 15-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 Pfam PF01624 MutS domain I 18 129 5.1E-42 T 15-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 SUPERFAMILY SSF53150 124 276 1.06E-42 T 15-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 Pfam PF00488 MutS domain V 617 804 1.3E-88 T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 695 711 - T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 17 850 25.404 T 15-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 Gene3D G3DSA:1.10.1420.10 276 566 2.7E-106 T 15-10-2018 XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 SMART SM00534 614 801 3.3E-124 T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 Pfam PF05190 MutS family domain IV 435 524 5.2E-29 T 15-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 SUPERFAMILY SSF55271 11 123 4.84E-43 T 15-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 SMART SM00533 293 598 3.3E-103 T 15-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 Gene3D G3DSA:3.40.50.300 577 850 2.8E-101 T 15-10-2018 XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 Pfam PF05188 MutS domain II 138 263 6.0E-31 T 15-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 SUPERFAMILY SSF52540 574 805 1.68E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 PIRSF PIRSF037677 9 191 2.7E-28 T 15-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 PIRSF PIRSF037677 213 838 3.9E-126 T 15-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 Gene3D G3DSA:3.40.1170.10 9 131 6.4E-53 T 15-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 17 855 0.0 T 15-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 XDD1_3156 1908406bfb14aa38f0c13b75f3406801 858 Gene3D G3DSA:1.10.1420.10 394 510 2.7E-106 T 15-10-2018 XDD1_3805 609d44322a23bc905cdfa7bc9beffee4 704 Gene3D G3DSA:3.10.20.30 381 455 4.4E-29 T 15-10-2018 IPR012675 Beta-grasp domain superfamily XDD1_3805 609d44322a23bc905cdfa7bc9beffee4 704 SUPERFAMILY SSF109604 3 190 4.39E-75 T 15-10-2018 XDD1_3805 609d44322a23bc905cdfa7bc9beffee4 704 Pfam PF13328 HD domain 26 175 5.7E-53 T 15-10-2018 IPR003607 HD/PDEase domain XDD1_3805 609d44322a23bc905cdfa7bc9beffee4 704 Gene3D G3DSA:3.30.460.10 193 325 1.5E-48 T 15-10-2018 XDD1_3805 609d44322a23bc905cdfa7bc9beffee4 704 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.0E-36 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 XDD1_3805 609d44322a23bc905cdfa7bc9beffee4 704 Gene3D G3DSA:3.30.70.260 624 704 2.8E-13 T 15-10-2018 XDD1_3805 609d44322a23bc905cdfa7bc9beffee4 704 SUPERFAMILY SSF55021 629 701 2.37E-6 T 15-10-2018 XDD1_3805 609d44322a23bc905cdfa7bc9beffee4 704 Gene3D G3DSA:1.10.3210.10 3 190 1.2E-80 T 15-10-2018 XDD1_3805 609d44322a23bc905cdfa7bc9beffee4 704 Pfam PF13291 ACT domain 624 701 2.9E-14 T 15-10-2018 IPR002912 ACT domain XDD1_3805 609d44322a23bc905cdfa7bc9beffee4 704 SUPERFAMILY SSF81301 180 392 4.09E-64 T 15-10-2018 XDD1_3805 609d44322a23bc905cdfa7bc9beffee4 704 SMART SM00954 235 345 8.7E-65 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 XDD1_3805 609d44322a23bc905cdfa7bc9beffee4 704 Pfam PF02824 TGS domain 388 447 7.9E-20 T 15-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 XDD1_3805 609d44322a23bc905cdfa7bc9beffee4 704 SMART SM00471 41 153 4.0E-11 T 15-10-2018 IPR003607 HD/PDEase domain XDD1_3805 609d44322a23bc905cdfa7bc9beffee4 704 SUPERFAMILY SSF81271 375 447 1.29E-20 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 XDD1_3805 609d44322a23bc905cdfa7bc9beffee4 704 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 700 3.6E-283 T 15-10-2018 IPR004811 RelA/SpoT family GO:0015969 XDD1_1388 e8adeed7e3ddd863400d02b436326ef0 175 SUPERFAMILY SSF50249 4 175 4.46E-56 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_1388 e8adeed7e3ddd863400d02b436326ef0 175 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 38.054 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XDD1_1388 e8adeed7e3ddd863400d02b436326ef0 175 Gene3D G3DSA:2.40.50.140 3 149 1.0E-50 T 15-10-2018 XDD1_1388 e8adeed7e3ddd863400d02b436326ef0 175 PIRSF PIRSF002070 2 159 7.5E-38 T 15-10-2018 XDD1_1388 e8adeed7e3ddd863400d02b436326ef0 175 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 4 175 7.6E-57 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XDD1_1388 e8adeed7e3ddd863400d02b436326ef0 175 Pfam PF00436 Single-strand binding protein family 6 112 1.3E-41 T 15-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XDD1_1585 aab61aeb1f39139a9995b1f7b930fb03 1487 Gene3D G3DSA:1.20.58.850 582 852 3.9E-133 T 15-10-2018 XDD1_1585 aab61aeb1f39139a9995b1f7b930fb03 1487 Gene3D G3DSA:1.20.1060.30 667 778 3.9E-133 T 15-10-2018 XDD1_1585 aab61aeb1f39139a9995b1f7b930fb03 1487 Gene3D G3DSA:3.40.1140.10 1383 1468 9.3E-38 T 15-10-2018 XDD1_1585 aab61aeb1f39139a9995b1f7b930fb03 1487 Gene3D G3DSA:1.20.58.850 620 830 3.9E-133 T 15-10-2018 XDD1_1585 aab61aeb1f39139a9995b1f7b930fb03 1487 SUPERFAMILY SSF52540 21 1433 3.08E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1585 aab61aeb1f39139a9995b1f7b930fb03 1487 Pfam PF16330 MukB hinge domain 645 810 1.1E-75 T 15-10-2018 IPR032520 MukB, hinge domain XDD1_1585 aab61aeb1f39139a9995b1f7b930fb03 1487 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 10.937 T 15-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 XDD1_1585 aab61aeb1f39139a9995b1f7b930fb03 1487 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 5.0E-15 T 15-10-2018 XDD1_1585 aab61aeb1f39139a9995b1f7b930fb03 1487 Pfam PF04310 MukB N-terminal 2 227 7.6E-125 T 15-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 XDD1_1585 aab61aeb1f39139a9995b1f7b930fb03 1487 Gene3D G3DSA:3.40.1140.10 1 227 3.6E-102 T 15-10-2018 XDD1_1585 aab61aeb1f39139a9995b1f7b930fb03 1487 PIRSF PIRSF005246 1 1485 0.0 T 15-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 XDD1_1585 aab61aeb1f39139a9995b1f7b930fb03 1487 SUPERFAMILY SSF52540 22 224 1.32E-22 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3320 99606d749e87fdcea821b0163bf76cf4 281 SUPERFAMILY SSF55620 185 267 1.33E-10 T 15-10-2018 XDD1_3320 99606d749e87fdcea821b0163bf76cf4 281 Gene3D G3DSA:3.30.1130.10 144 281 2.2E-60 T 15-10-2018 XDD1_3320 99606d749e87fdcea821b0163bf76cf4 281 Pfam PF14489 QueF-like protein 195 269 3.6E-27 T 15-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XDD1_3320 99606d749e87fdcea821b0163bf76cf4 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 163.226 T 15-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XDD1_3320 99606d749e87fdcea821b0163bf76cf4 281 PIRSF PIRSF004750 6 281 2.3E-126 T 15-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XDD1_3320 99606d749e87fdcea821b0163bf76cf4 281 Gene3D G3DSA:3.30.1130.10 21 139 1.0E-43 T 15-10-2018 XDD1_3320 99606d749e87fdcea821b0163bf76cf4 281 TIGRFAM TIGR03138 QueF: queuine synthase 10 281 5.0E-126 T 15-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XDD1_3320 99606d749e87fdcea821b0163bf76cf4 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 130 6.2E-49 T 15-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XDD1_2042 7a34ecc80b95aba9d47d3e7124154c58 191 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 24 145 2.1E-23 T 15-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN XDD1_2042 7a34ecc80b95aba9d47d3e7124154c58 191 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 32 146 9.7E-23 T 15-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN XDD1_2042 7a34ecc80b95aba9d47d3e7124154c58 191 Gene3D G3DSA:2.60.40.4150 37 179 6.3E-39 T 15-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 Gene3D G3DSA:3.30.559.10 657 844 2.2E-28 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 Pfam PF00668 Condensation domain 662 1136 1.4E-33 T 15-10-2018 IPR001242 Condensation domain XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 Pfam PF00668 Condensation domain 1813 2108 7.6E-9 T 15-10-2018 IPR001242 Condensation domain XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 Gene3D G3DSA:3.40.50.12780 5 429 1.5E-121 T 15-10-2018 XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 SUPERFAMILY SSF47336 1710 1778 1.57E-13 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 Gene3D G3DSA:3.30.300.30 430 539 7.8E-33 T 15-10-2018 XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 SUPERFAMILY SSF52777 659 826 9.78E-23 T 15-10-2018 XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 Gene3D G3DSA:3.30.300.30 1582 1702 5.6E-34 T 15-10-2018 XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 SUPERFAMILY SSF52777 1990 2222 6.0E-5 T 15-10-2018 XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 SUPERFAMILY SSF47336 545 616 7.33E-14 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 Gene3D G3DSA:3.30.559.10 1809 1990 3.2E-11 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 Pfam PF00550 Phosphopantetheine attachment site 1718 1772 1.7E-9 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 Pfam PF00550 Phosphopantetheine attachment site 555 615 2.9E-6 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 40 460 2.9E-116 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1192 1612 8.3E-146 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1325 1336 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 Gene3D G3DSA:3.40.50.12780 1153 1580 5.1E-146 T 15-10-2018 XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 SUPERFAMILY SSF56801 1116 1729 2.75E-159 T 15-10-2018 XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 Pfam PF13193 AMP-binding enzyme C-terminal domain 1596 1688 1.1E-11 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 Pfam PF13193 AMP-binding enzyme C-terminal domain 444 525 3.9E-15 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 SUPERFAMILY SSF56801 11 565 7.72E-141 T 15-10-2018 XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 SUPERFAMILY SSF52777 864 1114 9.34E-35 T 15-10-2018 XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 Pfam PF00501 AMP-binding enzyme 1162 1588 8.5E-104 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 Pfam PF00501 AMP-binding enzyme 19 436 3.9E-94 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 SUPERFAMILY SSF52777 1827 2002 7.11E-13 T 15-10-2018 XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 Gene3D G3DSA:3.30.559.30 1991 2247 2.3E-9 T 15-10-2018 XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 Gene3D G3DSA:1.10.1200.10 1703 1789 9.2E-19 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2713 bcb26c76ba03b183ba9d0b4b3edfd113 2250 Gene3D G3DSA:1.10.1200.10 540 621 4.1E-16 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_3145 a4e3f1d091d8266ac3873e373299e198 339 Gene3D G3DSA:3.90.25.10 194 329 1.4E-143 T 15-10-2018 XDD1_3145 a4e3f1d091d8266ac3873e373299e198 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 6.3E-59 T 15-10-2018 IPR016040 NAD(P)-binding domain XDD1_3145 a4e3f1d091d8266ac3873e373299e198 339 SUPERFAMILY SSF51735 3 337 4.36E-96 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_3145 a4e3f1d091d8266ac3873e373299e198 339 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 335 4.6E-142 T 15-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 XDD1_3145 a4e3f1d091d8266ac3873e373299e198 339 Gene3D G3DSA:3.40.50.720 3 274 1.4E-143 T 15-10-2018 XDD1_3840 0ace792671b6bb0aceac03e486fffa92 457 PIRSF PIRSF000167 3 454 9.9E-175 T 15-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 XDD1_3840 0ace792671b6bb0aceac03e486fffa92 457 Pfam PF04055 Radical SAM superfamily 58 226 6.6E-18 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XDD1_3840 0ace792671b6bb0aceac03e486fffa92 457 Gene3D G3DSA:3.80.30.20 1 363 1.3E-136 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe XDD1_3840 0ace792671b6bb0aceac03e486fffa92 457 SMART SM00729 52 272 8.8E-54 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 XDD1_3840 0ace792671b6bb0aceac03e486fffa92 457 Gene3D G3DSA:1.10.10.920 364 457 5.4E-37 T 15-10-2018 XDD1_3840 0ace792671b6bb0aceac03e486fffa92 457 Pfam PF06969 HemN C-terminal domain 363 431 6.4E-12 T 15-10-2018 IPR010723 HemN, C-terminal XDD1_3840 0ace792671b6bb0aceac03e486fffa92 457 SUPERFAMILY SSF102114 6 444 1.96E-147 T 15-10-2018 XDD1_3840 0ace792671b6bb0aceac03e486fffa92 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 457 3.3E-220 T 15-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 XDD1_1182 600f6321a38b12aec30a80727e751fba 559 PIRSF PIRSF000137 1 535 5.8E-134 T 15-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 XDD1_1182 600f6321a38b12aec30a80727e751fba 559 Pfam PF00732 GMC oxidoreductase 3 300 6.0E-93 T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 XDD1_1182 600f6321a38b12aec30a80727e751fba 559 TIGRFAM TIGR01810 betA: choline dehydrogenase 4 537 4.1E-277 T 15-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 XDD1_1182 600f6321a38b12aec30a80727e751fba 559 Gene3D G3DSA:4.10.450.10 36 199 4.0E-173 T 15-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 XDD1_1182 600f6321a38b12aec30a80727e751fba 559 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 XDD1_1182 600f6321a38b12aec30a80727e751fba 559 SUPERFAMILY SSF51905 2 534 1.58E-84 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1182 600f6321a38b12aec30a80727e751fba 559 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 1 554 59.859 T 15-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 XDD1_1182 600f6321a38b12aec30a80727e751fba 559 Pfam PF05199 GMC oxidoreductase 393 527 1.3E-41 T 15-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 XDD1_1182 600f6321a38b12aec30a80727e751fba 559 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 259 273 - T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 XDD1_1182 600f6321a38b12aec30a80727e751fba 559 Gene3D G3DSA:1.10.1220.110 97 151 4.0E-173 T 15-10-2018 XDD1_1182 600f6321a38b12aec30a80727e751fba 559 Gene3D G3DSA:3.30.410.40 152 474 4.0E-173 T 15-10-2018 XDD1_1182 600f6321a38b12aec30a80727e751fba 559 Gene3D G3DSA:3.50.50.60 3 531 4.0E-173 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1182 600f6321a38b12aec30a80727e751fba 559 SUPERFAMILY SSF54373 295 477 6.47E-62 T 15-10-2018 XDD1_0215 e866054d613615c5c22640c037e97ba3 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 108 145 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 XDD1_0215 e866054d613615c5c22640c037e97ba3 383 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 XDD1_0215 e866054d613615c5c22640c037e97ba3 383 SUPERFAMILY SSF53187 4 379 3.14E-58 T 15-10-2018 XDD1_0215 e866054d613615c5c22640c037e97ba3 383 SUPERFAMILY SSF55031 179 292 1.03E-21 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain XDD1_0215 e866054d613615c5c22640c037e97ba3 383 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 9 375 1.9E-149 T 15-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 XDD1_0215 e866054d613615c5c22640c037e97ba3 383 Gene3D G3DSA:3.30.70.360 179 299 5.8E-84 T 15-10-2018 XDD1_0215 e866054d613615c5c22640c037e97ba3 383 Gene3D G3DSA:3.40.630.10 11 363 5.8E-84 T 15-10-2018 XDD1_0215 e866054d613615c5c22640c037e97ba3 383 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 380 65.038 T 15-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 XDD1_0215 e866054d613615c5c22640c037e97ba3 383 Pfam PF01546 Peptidase family M20/M25/M40 74 376 2.5E-34 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 XDD1_0215 e866054d613615c5c22640c037e97ba3 383 Pfam PF07687 Peptidase dimerisation domain 176 286 4.6E-24 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain XDD1_0572 df3c15fd236099ab46b4c2c5c71f75b9 347 SMART SM00342 260 344 7.8E-29 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_0572 df3c15fd236099ab46b4c2c5c71f75b9 347 Pfam PF14525 AraC-binding-like domain 48 222 1.9E-42 T 15-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like XDD1_0572 df3c15fd236099ab46b4c2c5c71f75b9 347 Pfam PF12833 Helix-turn-helix domain 266 346 4.1E-26 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_0572 df3c15fd236099ab46b4c2c5c71f75b9 347 SUPERFAMILY SSF46689 244 294 2.24E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0572 df3c15fd236099ab46b4c2c5c71f75b9 347 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 297 340 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 XDD1_0572 df3c15fd236099ab46b4c2c5c71f75b9 347 Gene3D G3DSA:1.10.10.60 244 347 3.5E-37 T 15-10-2018 XDD1_0572 df3c15fd236099ab46b4c2c5c71f75b9 347 SUPERFAMILY SSF46689 297 345 6.72E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3675 8eadcd88edfc18e4ff85534900b79441 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 8.0E-35 T 15-10-2018 IPR009383 Protein of unknown function DUF1040 XDD1_3675 8eadcd88edfc18e4ff85534900b79441 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 1.2E-43 T 15-10-2018 IPR009383 Protein of unknown function DUF1040 XDD1_3675 8eadcd88edfc18e4ff85534900b79441 89 Gene3D G3DSA:1.10.1580.20 1 89 5.7E-45 T 15-10-2018 IPR038134 YihD-like superfamily XDD1_3958 049d70e5041a1365e7530f330a8efcc0 213 Pfam PF01292 Prokaryotic cytochrome b561 10 185 4.8E-22 T 15-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 XDD1_3958 049d70e5041a1365e7530f330a8efcc0 213 SUPERFAMILY SSF81342 7 209 6.93E-54 T 15-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 XDD1_3958 049d70e5041a1365e7530f330a8efcc0 213 Gene3D G3DSA:1.20.950.20 3 213 2.5E-70 T 15-10-2018 XDD1_3958 049d70e5041a1365e7530f330a8efcc0 213 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 8 206 1.8E-64 T 15-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 XDD1_3851 dfd24481f31d2a941231617634245c3f 281 Gene3D G3DSA:3.40.190.10 126 219 2.8E-64 T 15-10-2018 XDD1_3851 dfd24481f31d2a941231617634245c3f 281 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 259 2.7E-60 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XDD1_3851 dfd24481f31d2a941231617634245c3f 281 SMART SM00062 38 261 3.8E-68 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XDD1_3851 dfd24481f31d2a941231617634245c3f 281 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 62 75 - T 15-10-2018 IPR018313 Solute-binding protein family 3, conserved site XDD1_3851 dfd24481f31d2a941231617634245c3f 281 SUPERFAMILY SSF53850 11 260 3.88E-67 T 15-10-2018 XDD1_3851 dfd24481f31d2a941231617634245c3f 281 Gene3D G3DSA:3.40.190.10 30 254 2.8E-64 T 15-10-2018 XDD1_3851 dfd24481f31d2a941231617634245c3f 281 SMART SM00079 40 260 0.0064 T 15-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 SUPERFAMILY SSF51735 1167 1357 5.0E-29 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 SMART SM00825 Beta-ketoacyl synthase 11 440 9.3E-149 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 SMART SM00823 Phosphopantetheine attachment site 2080 2152 2.1E-7 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 SUPERFAMILY SSF47336 2077 2151 2.62E-12 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 SUPERFAMILY SSF52151 555 836 3.66E-45 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 390 480 1.8E-15 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 Gene3D G3DSA:3.10.129.110 1379 1645 1.2E-36 T 15-10-2018 XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 Gene3D G3DSA:3.90.180.10 1692 1988 1.8E-99 T 15-10-2018 XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1168 1351 2.1E-14 T 15-10-2018 XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 Pfam PF14765 Polyketide synthase dehydratase 1385 1640 1.1E-31 T 15-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 557 854 2.5E-23 T 15-10-2018 IPR020801 Polyketide synthase, acyl transferase domain XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 170 186 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 1698 1759 2.6E-9 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 SMART SM00826 1376 1535 4.4E-6 T 15-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 SUPERFAMILY SSF50129 1693 1811 5.69E-30 T 15-10-2018 IPR011032 GroES-like superfamily XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 SUPERFAMILY SSF53901 7 436 6.09E-72 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 SMART SM00829 1681 1988 1.3E-141 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 Gene3D G3DSA:3.40.50.720 927 1378 9.1E-55 T 15-10-2018 XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 Pfam PF00698 Acyl transferase domain 555 812 1.1E-24 T 15-10-2018 IPR014043 Acyl transferase XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 SUPERFAMILY SSF51735 1783 1923 1.55E-37 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 Gene3D G3DSA:3.30.70.3290 459 899 5.1E-72 T 15-10-2018 XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 Gene3D G3DSA:3.40.47.10 2 457 8.7E-145 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 Pfam PF08659 KR domain 1169 1349 2.6E-26 T 15-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 Gene3D G3DSA:3.40.50.720 1800 1939 1.8E-99 T 15-10-2018 XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 Gene3D G3DSA:3.40.366.10 555 856 5.1E-72 T 15-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 265 387 8.7E-34 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 9 257 3.8E-63 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 Pfam PF00550 Phosphopantetheine attachment site 2085 2147 4.0E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 Gene3D G3DSA:1.10.1200.10 2077 2160 2.6E-12 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2715 bbad7498f16545173ddb570d38c7b5f5 2211 Pfam PF13602 Zinc-binding dehydrogenase 1854 1988 1.3E-18 T 15-10-2018 XDD1_2008 ba52faba456339c407440cfbdd29ea87 566 Pfam PF01740 STAS domain 453 555 7.8E-9 T 15-10-2018 IPR002645 STAS domain XDD1_2008 ba52faba456339c407440cfbdd29ea87 566 TIGRFAM TIGR00815 sulP: sulfate permease 18 556 9.3E-132 T 15-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 XDD1_2008 ba52faba456339c407440cfbdd29ea87 566 Gene3D G3DSA:3.30.750.24 444 561 9.4E-21 T 15-10-2018 IPR036513 STAS domain superfamily XDD1_2008 ba52faba456339c407440cfbdd29ea87 566 ProSitePatterns PS01130 SLC26A transporters signature. 58 79 - T 15-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 XDD1_2008 ba52faba456339c407440cfbdd29ea87 566 SUPERFAMILY SSF52091 455 561 7.26E-12 T 15-10-2018 IPR036513 STAS domain superfamily XDD1_2008 ba52faba456339c407440cfbdd29ea87 566 Pfam PF00916 Sulfate permease family 29 412 6.3E-80 T 15-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 XDD1_2082 a4ede984ef1f1302d2b906fa5bfca5de 231 SUPERFAMILY SSF53067 111 218 2.07E-30 T 15-10-2018 XDD1_2082 a4ede984ef1f1302d2b906fa5bfca5de 231 Pfam PF00814 Glycoprotease family 31 154 2.4E-29 T 15-10-2018 IPR000905 Gcp-like domain XDD1_2082 a4ede984ef1f1302d2b906fa5bfca5de 231 Gene3D G3DSA:3.30.420.40 96 189 5.1E-85 T 15-10-2018 XDD1_2082 a4ede984ef1f1302d2b906fa5bfca5de 231 Gene3D G3DSA:3.30.420.40 5 223 5.1E-85 T 15-10-2018 XDD1_2082 a4ede984ef1f1302d2b906fa5bfca5de 231 SUPERFAMILY SSF53067 5 106 8.2E-29 T 15-10-2018 XDD1_2082 a4ede984ef1f1302d2b906fa5bfca5de 231 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 220 1.1E-71 T 15-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 XDD1_1057 8d693251c6c35a5e9c3e8a2e210bd8d7 318 Pfam PF00892 EamA-like transporter family 165 298 2.9E-6 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_1057 8d693251c6c35a5e9c3e8a2e210bd8d7 318 Pfam PF00892 EamA-like transporter family 7 145 4.2E-19 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_3109 3d718216f64157a6b5ef397033338f3d 830 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 9 828 0.0 T 15-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 XDD1_3109 3d718216f64157a6b5ef397033338f3d 830 Pfam PF04408 Helicase associated domain (HA2) 394 473 9.9E-9 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 XDD1_3109 3d718216f64157a6b5ef397033338f3d 830 Gene3D G3DSA:3.40.50.300 6 184 1.2E-55 T 15-10-2018 XDD1_3109 3d718216f64157a6b5ef397033338f3d 830 SUPERFAMILY SSF52540 21 344 7.17E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3109 3d718216f64157a6b5ef397033338f3d 830 Pfam PF00270 DEAD/DEAH box helicase 16 167 1.4E-12 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XDD1_3109 3d718216f64157a6b5ef397033338f3d 830 SMART SM00487 4 191 2.2E-24 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XDD1_3109 3d718216f64157a6b5ef397033338f3d 830 PIRSF PIRSF005496 5 830 0.0 T 15-10-2018 XDD1_3109 3d718216f64157a6b5ef397033338f3d 830 SMART SM00847 393 490 1.9E-7 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 XDD1_3109 3d718216f64157a6b5ef397033338f3d 830 Gene3D G3DSA:1.20.120.1080 376 457 4.8E-8 T 15-10-2018 XDD1_3109 3d718216f64157a6b5ef397033338f3d 830 SMART SM00490 231 333 2.9E-14 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_3109 3d718216f64157a6b5ef397033338f3d 830 Pfam PF00271 Helicase conserved C-terminal domain 208 332 1.1E-12 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_3109 3d718216f64157a6b5ef397033338f3d 830 Pfam PF08482 ATP-dependent helicase C-terminal 684 816 7.8E-52 T 15-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal XDD1_3109 3d718216f64157a6b5ef397033338f3d 830 Gene3D G3DSA:3.40.50.300 185 351 1.8E-50 T 15-10-2018 XDD1_3309 e082d08dbabe8a1439eff78ee9f1cbb7 274 Gene3D G3DSA:1.10.166.10 1 70 9.2E-32 T 15-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 XDD1_3309 e082d08dbabe8a1439eff78ee9f1cbb7 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 2.6E-25 T 15-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 XDD1_3309 e082d08dbabe8a1439eff78ee9f1cbb7 274 SUPERFAMILY SSF51161 1 256 1.16E-79 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily XDD1_3309 e082d08dbabe8a1439eff78ee9f1cbb7 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 134 166 0.0019 T 15-10-2018 IPR001451 Hexapeptide repeat XDD1_3309 e082d08dbabe8a1439eff78ee9f1cbb7 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.202 T 15-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 XDD1_3309 e082d08dbabe8a1439eff78ee9f1cbb7 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 1.3E-158 T 15-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 XDD1_3309 e082d08dbabe8a1439eff78ee9f1cbb7 274 Gene3D G3DSA:2.160.10.10 87 257 2.9E-58 T 15-10-2018 XDD1_3309 e082d08dbabe8a1439eff78ee9f1cbb7 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XDD1_3309 e082d08dbabe8a1439eff78ee9f1cbb7 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 3.5E-13 T 15-10-2018 IPR001451 Hexapeptide repeat XDD1_2296 2a71bd1d1f4a8124a59d3b79083cd36a 1326 Gene3D G3DSA:1.20.5.550 87 138 1.1E-24 T 15-10-2018 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 XDD1_2296 2a71bd1d1f4a8124a59d3b79083cd36a 1326 Gene3D G3DSA:3.40.605.10 636 1117 7.2E-143 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 XDD1_2296 2a71bd1d1f4a8124a59d3b79083cd36a 1326 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 148 259 2.0E-46 T 15-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 XDD1_2296 2a71bd1d1f4a8124a59d3b79083cd36a 1326 PIRSF PIRSF000197 74 1326 0.0 T 15-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 XDD1_2296 2a71bd1d1f4a8124a59d3b79083cd36a 1326 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 610 1117 1.3E-245 T 15-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 XDD1_2296 2a71bd1d1f4a8124a59d3b79083cd36a 1326 SUPERFAMILY SSF81935 88 261 7.19E-66 T 15-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 XDD1_2296 2a71bd1d1f4a8124a59d3b79083cd36a 1326 Pfam PF01619 Proline dehydrogenase 270 569 9.5E-100 T 15-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 XDD1_2296 2a71bd1d1f4a8124a59d3b79083cd36a 1326 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 886 893 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 XDD1_2296 2a71bd1d1f4a8124a59d3b79083cd36a 1326 Gene3D G3DSA:3.40.309.10 889 1086 7.2E-143 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 XDD1_2296 2a71bd1d1f4a8124a59d3b79083cd36a 1326 SUPERFAMILY SSF53720 641 1117 1.19E-124 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XDD1_2296 2a71bd1d1f4a8124a59d3b79083cd36a 1326 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 914 925 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 XDD1_2296 2a71bd1d1f4a8124a59d3b79083cd36a 1326 Gene3D G3DSA:3.20.20.220 217 610 5.1E-162 T 15-10-2018 XDD1_2296 2a71bd1d1f4a8124a59d3b79083cd36a 1326 SUPERFAMILY SSF47598 4 45 1.09E-8 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XDD1_2296 2a71bd1d1f4a8124a59d3b79083cd36a 1326 SUPERFAMILY SSF51730 262 617 3.84E-124 T 15-10-2018 IPR029041 FAD-linked oxidoreductase-like XDD1_2296 2a71bd1d1f4a8124a59d3b79083cd36a 1326 Gene3D G3DSA:1.10.1220.10 11 52 9.8E-22 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 XDD1_2296 2a71bd1d1f4a8124a59d3b79083cd36a 1326 Pfam PF00171 Aldehyde dehydrogenase family 666 1110 3.7E-112 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 XDD1_0523 3075e4c2f60905aabf16db01597fe358 408 SUPERFAMILY SSF54506 200 392 2.98E-43 T 15-10-2018 XDD1_0523 3075e4c2f60905aabf16db01597fe358 408 SUPERFAMILY SSF54506 30 197 7.22E-24 T 15-10-2018 XDD1_0523 3075e4c2f60905aabf16db01597fe358 408 Pfam PF04303 PrpF protein 30 390 1.0E-59 T 15-10-2018 IPR007400 PrpF protein XDD1_0523 3075e4c2f60905aabf16db01597fe358 408 Gene3D G3DSA:3.10.310.10 32 389 6.9E-85 T 15-10-2018 XDD1_0523 3075e4c2f60905aabf16db01597fe358 408 Gene3D G3DSA:3.10.310.10 196 376 6.9E-85 T 15-10-2018 XDD1_1470 e29a67fbb932ee206a6ad90acffea748 302 SUPERFAMILY SSF142338 11 295 6.8E-81 T 15-10-2018 XDD1_1470 e29a67fbb932ee206a6ad90acffea748 302 Pfam PF01933 Uncharacterised protein family UPF0052 12 294 5.8E-75 T 15-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 XDD1_1470 e29a67fbb932ee206a6ad90acffea748 302 Gene3D G3DSA:3.40.50.12300 9 301 5.7E-78 T 15-10-2018 IPR038136 Gluconeogenesis factor superfamily XDD1_1470 e29a67fbb932ee206a6ad90acffea748 302 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 258 7.6E-95 T 15-10-2018 IPR010119 Gluconeogenesis factor XDD1_1470 e29a67fbb932ee206a6ad90acffea748 302 Hamap MF_00973 Gluconeogenesis factor. 8 300 31.397 T 15-10-2018 IPR010119 Gluconeogenesis factor XDD1_3172 b7d9515d12dcec31d9a78c18df4bceb3 588 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 490 506 - T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XDD1_3172 b7d9515d12dcec31d9a78c18df4bceb3 588 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 367 429 4.8E-14 T 15-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XDD1_3172 b7d9515d12dcec31d9a78c18df4bceb3 588 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 92 151 8.8E-13 T 15-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XDD1_3172 b7d9515d12dcec31d9a78c18df4bceb3 588 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 185 343 2.6E-48 T 15-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XDD1_3172 b7d9515d12dcec31d9a78c18df4bceb3 588 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 486 552 1.7 T 15-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XDD1_3172 b7d9515d12dcec31d9a78c18df4bceb3 588 SUPERFAMILY SSF55124 26 157 5.23E-26 T 15-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XDD1_3172 b7d9515d12dcec31d9a78c18df4bceb3 588 Gene3D G3DSA:3.30.413.10 438 580 1.9E-33 T 15-10-2018 XDD1_3172 b7d9515d12dcec31d9a78c18df4bceb3 588 Gene3D G3DSA:3.30.413.10 153 360 1.2E-88 T 15-10-2018 XDD1_3172 b7d9515d12dcec31d9a78c18df4bceb3 588 Gene3D G3DSA:3.90.480.20 29 419 1.2E-88 T 15-10-2018 XDD1_3172 b7d9515d12dcec31d9a78c18df4bceb3 588 PRINTS PR00397 Sirohaem Fe-binding site signature 442 460 2.1E-8 T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XDD1_3172 b7d9515d12dcec31d9a78c18df4bceb3 588 PRINTS PR00397 Sirohaem Fe-binding site signature 490 508 2.1E-8 T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XDD1_3172 b7d9515d12dcec31d9a78c18df4bceb3 588 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 22 583 57.839 T 15-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XDD1_3172 b7d9515d12dcec31d9a78c18df4bceb3 588 SUPERFAMILY SSF56014 442 572 7.07E-32 T 15-10-2018 XDD1_3172 b7d9515d12dcec31d9a78c18df4bceb3 588 SUPERFAMILY SSF56014 162 356 3.66E-59 T 15-10-2018 XDD1_3172 b7d9515d12dcec31d9a78c18df4bceb3 588 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 31 571 8.1E-289 T 15-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XDD1_3172 b7d9515d12dcec31d9a78c18df4bceb3 588 SUPERFAMILY SSF55124 358 434 4.91E-21 T 15-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XDD1_1158 d7650cb86a9113d47d671f543f82b935 319 SUPERFAMILY SSF52440 2 122 3.45E-45 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XDD1_1158 d7650cb86a9113d47d671f543f82b935 319 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 313 1.4E-137 T 15-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 XDD1_1158 d7650cb86a9113d47d671f543f82b935 319 Gene3D G3DSA:3.30.1490.20 137 201 7.6E-120 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XDD1_1158 d7650cb86a9113d47d671f543f82b935 319 Gene3D G3DSA:3.30.470.20 115 295 7.6E-120 T 15-10-2018 XDD1_1158 d7650cb86a9113d47d671f543f82b935 319 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 179.776 T 15-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 XDD1_1158 d7650cb86a9113d47d671f543f82b935 319 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 5.5E-47 T 15-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 XDD1_1158 d7650cb86a9113d47d671f543f82b935 319 SUPERFAMILY SSF56059 123 313 5.78E-58 T 15-10-2018 XDD1_1158 d7650cb86a9113d47d671f543f82b935 319 Gene3D G3DSA:3.40.50.20 7 114 7.6E-120 T 15-10-2018 XDD1_1158 d7650cb86a9113d47d671f543f82b935 319 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 3.6E-79 T 15-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 XDD1_1572 a93ebe8c21debca46d3988e468f5cf38 228 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 33.724 T 15-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 XDD1_1572 a93ebe8c21debca46d3988e468f5cf38 228 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 5.0E-90 T 15-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 XDD1_1572 a93ebe8c21debca46d3988e468f5cf38 228 Pfam PF02224 Cytidylate kinase 8 221 5.8E-80 T 15-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 XDD1_1572 a93ebe8c21debca46d3988e468f5cf38 228 SUPERFAMILY SSF52540 6 223 1.05E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1572 a93ebe8c21debca46d3988e468f5cf38 228 Gene3D G3DSA:3.40.50.300 1 228 5.3E-83 T 15-10-2018 XDD1_2969 18eef4e5e6a28826a46302c5cbdd65f8 562 Gene3D G3DSA:3.30.420.350 109 335 2.7E-47 T 15-10-2018 XDD1_2969 18eef4e5e6a28826a46302c5cbdd65f8 562 Pfam PF02543 Carbamoyltransferase N-terminus 107 341 1.9E-22 T 15-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 XDD1_2969 18eef4e5e6a28826a46302c5cbdd65f8 562 Gene3D G3DSA:3.30.420.40 23 342 2.7E-47 T 15-10-2018 XDD1_2969 18eef4e5e6a28826a46302c5cbdd65f8 562 SUPERFAMILY SSF53067 24 342 6.85E-15 T 15-10-2018 XDD1_2969 18eef4e5e6a28826a46302c5cbdd65f8 562 Pfam PF16861 Carbamoyltransferase C-terminus 394 561 3.3E-64 T 15-10-2018 IPR031730 Carbamoyltransferase, C-terminal XDD1_2969 18eef4e5e6a28826a46302c5cbdd65f8 562 Gene3D G3DSA:3.90.870.20 357 562 3.2E-75 T 15-10-2018 IPR038152 Carbamoyltransferase, C-terminal domain superfamily XDD1_0217 804fe187971b80b268c879fe9f21f72b 257 SUPERFAMILY SSF53633 2 255 2.09E-60 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XDD1_0217 804fe187971b80b268c879fe9f21f72b 257 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 233 5.9E-71 T 15-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XDD1_0217 804fe187971b80b268c879fe9f21f72b 257 Hamap MF_00082 Acetylglutamate kinase [argB]. 1 250 41.995 T 15-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XDD1_0217 804fe187971b80b268c879fe9f21f72b 257 PIRSF PIRSF000728 1 257 5.8E-72 T 15-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XDD1_0217 804fe187971b80b268c879fe9f21f72b 257 Pfam PF00696 Amino acid kinase family 4 234 1.0E-38 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XDD1_0217 804fe187971b80b268c879fe9f21f72b 257 Gene3D G3DSA:3.40.1160.10 1 257 2.1E-72 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XDD1_0285 592fa62d1acc6061650cc67827a77794 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 15-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0285 592fa62d1acc6061650cc67827a77794 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 9.1E-51 T 15-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0285 592fa62d1acc6061650cc67827a77794 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.9 T 15-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0285 592fa62d1acc6061650cc67827a77794 110 Gene3D G3DSA:3.90.470.10 1 110 5.8E-47 T 15-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 XDD1_0285 592fa62d1acc6061650cc67827a77794 110 SUPERFAMILY SSF54843 1 109 4.97E-43 T 15-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 XDD1_0285 592fa62d1acc6061650cc67827a77794 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 3.6E-38 T 15-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 XDD1_3831 a1b6404a2df124b2d263a78a41716dbd 628 SUPERFAMILY SSF50985 247 609 2.27E-25 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II XDD1_3831 a1b6404a2df124b2d263a78a41716dbd 628 Gene3D G3DSA:2.130.10.30 493 626 3.5E-14 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II XDD1_3831 a1b6404a2df124b2d263a78a41716dbd 628 Gene3D G3DSA:2.130.10.30 244 382 1.6E-9 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II XDD1_0529 70c80731040067f25efc0c3645a531cd 337 Gene3D G3DSA:3.40.50.1370 7 328 2.6E-135 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XDD1_0529 70c80731040067f25efc0c3645a531cd 337 SUPERFAMILY SSF53671 1 331 1.57E-96 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XDD1_0529 70c80731040067f25efc0c3645a531cd 337 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 332 81.028 T 15-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 XDD1_0529 70c80731040067f25efc0c3645a531cd 337 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 329 3.0E-54 T 15-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 XDD1_0529 70c80731040067f25efc0c3645a531cd 337 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XDD1_0529 70c80731040067f25efc0c3645a531cd 337 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 331 1.7E-129 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 XDD1_0529 70c80731040067f25efc0c3645a531cd 337 Gene3D G3DSA:3.40.50.1370 150 318 2.6E-135 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XDD1_0529 70c80731040067f25efc0c3645a531cd 337 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 1.3E-46 T 15-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 XDD1_0529 70c80731040067f25efc0c3645a531cd 337 PRINTS PR00102 Ornithine carbamoyltransferase signature 310 321 1.4E-31 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 XDD1_0529 70c80731040067f25efc0c3645a531cd 337 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 1.4E-31 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 XDD1_0529 70c80731040067f25efc0c3645a531cd 337 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 1.4E-31 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 XDD1_0529 70c80731040067f25efc0c3645a531cd 337 PRINTS PR00102 Ornithine carbamoyltransferase signature 228 238 1.4E-31 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 XDD1_0529 70c80731040067f25efc0c3645a531cd 337 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 1.4E-31 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 XDD1_0529 70c80731040067f25efc0c3645a531cd 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 4.0E-24 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XDD1_0529 70c80731040067f25efc0c3645a531cd 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 4.0E-24 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XDD1_0529 70c80731040067f25efc0c3645a531cd 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 296 319 4.0E-24 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XDD1_0529 70c80731040067f25efc0c3645a531cd 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 4.0E-24 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XDD1_0706 eef8dfdc6ed74e0adb832d233d2ed597 170 Gene3D G3DSA:3.40.630.30 2 157 1.4E-38 T 15-10-2018 XDD1_0706 eef8dfdc6ed74e0adb832d233d2ed597 170 Pfam PF13673 Acetyltransferase (GNAT) domain 46 149 2.0E-7 T 15-10-2018 IPR000182 GNAT domain XDD1_0706 eef8dfdc6ed74e0adb832d233d2ed597 170 SUPERFAMILY SSF55729 6 149 4.85E-13 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_3306 66e4a69b7deed3f08744af701b17ec45 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 15-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 XDD1_3306 66e4a69b7deed3f08744af701b17ec45 241 Gene3D G3DSA:1.10.287.610 103 150 7.2E-92 T 15-10-2018 XDD1_3306 66e4a69b7deed3f08744af701b17ec45 241 Pfam PF00318 Ribosomal protein S2 9 224 1.3E-92 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_3306 66e4a69b7deed3f08744af701b17ec45 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.3E-107 T 15-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3306 66e4a69b7deed3f08744af701b17ec45 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 7.7E-38 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_3306 66e4a69b7deed3f08744af701b17ec45 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 7.7E-38 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_3306 66e4a69b7deed3f08744af701b17ec45 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 7.7E-38 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_3306 66e4a69b7deed3f08744af701b17ec45 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 7.7E-38 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_3306 66e4a69b7deed3f08744af701b17ec45 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 7.7E-38 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_3306 66e4a69b7deed3f08744af701b17ec45 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 7.7E-38 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_3306 66e4a69b7deed3f08744af701b17ec45 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 15-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 XDD1_3306 66e4a69b7deed3f08744af701b17ec45 241 Gene3D G3DSA:3.40.50.10490 8 219 7.2E-92 T 15-10-2018 XDD1_3306 66e4a69b7deed3f08744af701b17ec45 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.146 T 15-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3306 66e4a69b7deed3f08744af701b17ec45 241 SUPERFAMILY SSF52313 6 235 5.23E-95 T 15-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily XDD1_2274 061fb486d148305c748720a621403efe 442 Gene3D G3DSA:1.20.1740.10 5 435 1.3E-70 T 15-10-2018 XDD1_2274 061fb486d148305c748720a621403efe 442 PIRSF PIRSF006060 1 430 2.7E-57 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XDD1_2274 061fb486d148305c748720a621403efe 442 Pfam PF13520 Amino acid permease 12 402 6.3E-51 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XDD1_0358 2d3458b44146d6566393148c7752962a 458 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 15-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 XDD1_0358 2d3458b44146d6566393148c7752962a 458 PIRSF PIRSF006060 1 456 6.7E-62 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XDD1_0358 2d3458b44146d6566393148c7752962a 458 Pfam PF00324 Amino acid permease 16 428 4.3E-102 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 XDD1_0358 2d3458b44146d6566393148c7752962a 458 Gene3D G3DSA:1.20.1740.10 8 456 1.3E-53 T 15-10-2018 XDD1_2790 11d40be7e4dfa63494d4a4b651cb6e75 267 Pfam PF00459 Inositol monophosphatase family 2 258 1.2E-67 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XDD1_2790 11d40be7e4dfa63494d4a4b651cb6e75 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 2.9E-56 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XDD1_2790 11d40be7e4dfa63494d4a4b651cb6e75 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 2.9E-56 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XDD1_2790 11d40be7e4dfa63494d4a4b651cb6e75 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 2.9E-56 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XDD1_2790 11d40be7e4dfa63494d4a4b651cb6e75 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 2.9E-56 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XDD1_2790 11d40be7e4dfa63494d4a4b651cb6e75 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 2.9E-56 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XDD1_2790 11d40be7e4dfa63494d4a4b651cb6e75 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 2.9E-56 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XDD1_2790 11d40be7e4dfa63494d4a4b651cb6e75 267 SUPERFAMILY SSF56655 1 259 1.27E-82 T 15-10-2018 XDD1_2790 11d40be7e4dfa63494d4a4b651cb6e75 267 Gene3D G3DSA:3.40.190.80 142 267 2.5E-37 T 15-10-2018 XDD1_2790 11d40be7e4dfa63494d4a4b651cb6e75 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 15-10-2018 IPR020583 Inositol monophosphatase, metal-binding site XDD1_2790 11d40be7e4dfa63494d4a4b651cb6e75 267 Gene3D G3DSA:3.30.540.10 1 140 2.2E-53 T 15-10-2018 XDD1_2790 11d40be7e4dfa63494d4a4b651cb6e75 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 7.2E-36 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 XDD1_2790 11d40be7e4dfa63494d4a4b651cb6e75 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 7.2E-36 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 XDD1_2790 11d40be7e4dfa63494d4a4b651cb6e75 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 7.2E-36 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 XDD1_2790 11d40be7e4dfa63494d4a4b651cb6e75 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 7.2E-36 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 XDD1_3642 8bf787c2c2d8970c0f44c23cc0c87d7c 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 1.1E-31 T 15-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3642 8bf787c2c2d8970c0f44c23cc0c87d7c 121 SUPERFAMILY SSF48300 3 57 4.32E-16 T 15-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3642 8bf787c2c2d8970c0f44c23cc0c87d7c 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 48 5.2E-16 T 15-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3642 8bf787c2c2d8970c0f44c23cc0c87d7c 121 SUPERFAMILY SSF54736 50 121 2.27E-25 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like XDD1_3642 8bf787c2c2d8970c0f44c23cc0c87d7c 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 5.9E-48 T 15-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3642 8bf787c2c2d8970c0f44c23cc0c87d7c 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 6.0E-26 T 15-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3642 8bf787c2c2d8970c0f44c23cc0c87d7c 121 Gene3D G3DSA:3.30.1390.10 51 121 1.6E-32 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like XDD1_3642 8bf787c2c2d8970c0f44c23cc0c87d7c 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 25.386 T 15-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3642 8bf787c2c2d8970c0f44c23cc0c87d7c 121 Gene3D G3DSA:1.20.5.710 2 50 6.0E-25 T 15-10-2018 XDD1_0825 984b91644fcc025e4f33071db68d4f57 432 Gene3D G3DSA:3.30.565.10 278 425 4.3E-33 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_0825 984b91644fcc025e4f33071db68d4f57 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 421 1.0E-19 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_0825 984b91644fcc025e4f33071db68d4f57 432 Gene3D G3DSA:1.10.287.130 200 268 6.7E-24 T 15-10-2018 XDD1_0825 984b91644fcc025e4f33071db68d4f57 432 SUPERFAMILY SSF47384 190 269 6.08E-20 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XDD1_0825 984b91644fcc025e4f33071db68d4f57 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 1.1E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_0825 984b91644fcc025e4f33071db68d4f57 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 1.1E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_0825 984b91644fcc025e4f33071db68d4f57 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 1.1E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_0825 984b91644fcc025e4f33071db68d4f57 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 1.1E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_0825 984b91644fcc025e4f33071db68d4f57 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 96 420 4.8E-131 T 15-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 XDD1_0825 984b91644fcc025e4f33071db68d4f57 432 Gene3D G3DSA:3.30.450.20 84 199 1.5E-9 T 15-10-2018 XDD1_0825 984b91644fcc025e4f33071db68d4f57 432 SUPERFAMILY SSF55785 87 195 2.62E-9 T 15-10-2018 IPR035965 PAS domain superfamily XDD1_0825 984b91644fcc025e4f33071db68d4f57 432 Pfam PF00989 PAS fold 99 160 5.7E-7 T 15-10-2018 IPR013767 PAS fold GO:0006355 XDD1_0825 984b91644fcc025e4f33071db68d4f57 432 SMART SM00387 313 425 1.8E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_0825 984b91644fcc025e4f33071db68d4f57 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 269 8.9E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_0825 984b91644fcc025e4f33071db68d4f57 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 98 178 3.7E-6 T 15-10-2018 IPR000014 PAS domain XDD1_0825 984b91644fcc025e4f33071db68d4f57 432 SUPERFAMILY SSF55874 259 421 1.83E-36 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_0825 984b91644fcc025e4f33071db68d4f57 432 SMART SM00388 203 269 1.5E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_0825 984b91644fcc025e4f33071db68d4f57 432 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 1.6E-29 T 15-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 XDD1_0825 984b91644fcc025e4f33071db68d4f57 432 SMART SM00091 98 164 9.8E-5 T 15-10-2018 IPR000014 PAS domain XDD1_0494 bbc356af2e0e017ca51f079ab5cbe6e9 169 Pfam PF00583 Acetyltransferase (GNAT) family 36 122 3.8E-6 T 15-10-2018 IPR000182 GNAT domain XDD1_0494 bbc356af2e0e017ca51f079ab5cbe6e9 169 Gene3D G3DSA:3.40.630.30 1 168 2.9E-42 T 15-10-2018 XDD1_0494 bbc356af2e0e017ca51f079ab5cbe6e9 169 SUPERFAMILY SSF55729 1 160 1.77E-20 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_1547 770abe55467ac2e80b1711e63d5a98c6 651 SMART SM00382 33 220 8.8E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1547 770abe55467ac2e80b1711e63d5a98c6 651 Pfam PF00005 ABC transporter 24 172 6.2E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1547 770abe55467ac2e80b1711e63d5a98c6 651 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_1547 770abe55467ac2e80b1711e63d5a98c6 651 Pfam PF02687 FtsX-like permease family 556 644 6.0E-11 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 XDD1_1547 770abe55467ac2e80b1711e63d5a98c6 651 Gene3D G3DSA:3.40.50.300 1 257 3.2E-71 T 15-10-2018 XDD1_1547 770abe55467ac2e80b1711e63d5a98c6 651 SUPERFAMILY SSF52540 4 237 1.86E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1547 770abe55467ac2e80b1711e63d5a98c6 651 Pfam PF12704 MacB-like periplasmic core domain 276 494 1.1E-38 T 15-10-2018 IPR025857 MacB-like periplasmic core domain XDD1_3834 9ef701150d12a497ce867e026c46e0a5 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 235 347 4.1E-16 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_3834 9ef701150d12a497ce867e026c46e0a5 349 Gene3D G3DSA:3.30.450.20 8 112 2.2E-15 T 15-10-2018 XDD1_3834 9ef701150d12a497ce867e026c46e0a5 349 Gene3D G3DSA:3.30.565.10 191 348 5.7E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_3834 9ef701150d12a497ce867e026c46e0a5 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.1E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_3834 9ef701150d12a497ce867e026c46e0a5 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 1.1E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_3834 9ef701150d12a497ce867e026c46e0a5 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 1.1E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_3834 9ef701150d12a497ce867e026c46e0a5 349 SMART SM00387 233 349 3.7E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_3834 9ef701150d12a497ce867e026c46e0a5 349 SUPERFAMILY SSF47384 123 186 1.79E-13 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XDD1_3834 9ef701150d12a497ce867e026c46e0a5 349 SUPERFAMILY SSF55874 198 346 3.01E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_3834 9ef701150d12a497ce867e026c46e0a5 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 186 8.4E-15 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_3834 9ef701150d12a497ce867e026c46e0a5 349 SMART SM00091 7 75 1.1E-4 T 15-10-2018 IPR000014 PAS domain XDD1_3834 9ef701150d12a497ce867e026c46e0a5 349 SMART SM00388 129 194 1.2E-15 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_3834 9ef701150d12a497ce867e026c46e0a5 349 Gene3D G3DSA:1.10.287.130 115 189 1.8E-15 T 15-10-2018 XDD1_3834 9ef701150d12a497ce867e026c46e0a5 349 SUPERFAMILY SSF55785 11 99 8.12E-5 T 15-10-2018 IPR035965 PAS domain superfamily XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 Gene3D G3DSA:3.40.50.300 563 780 3.3E-65 T 15-10-2018 XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 SMART SM00382 224 369 3.4E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 SMART SM00382 610 751 8.1E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 SUPERFAMILY SSF52540 559 851 6.59E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 SMART SM01086 782 874 1.6E-16 T 15-10-2018 IPR019489 Clp ATPase, C-terminal XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 Gene3D G3DSA:3.40.50.300 370 557 4.3E-42 T 15-10-2018 XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 320 332 - T 15-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 229 361 8.0E-10 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 Gene3D G3DSA:1.10.8.60 782 878 1.3E-14 T 15-10-2018 XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 866 0.0 T 15-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 SUPERFAMILY SSF81923 12 132 6.87E-18 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 721 735 3.4E-33 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 688 706 3.4E-33 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 614 632 3.4E-33 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 659 677 3.4E-33 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 Gene3D G3DSA:1.10.1780.10 1 161 2.8E-43 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 26 75 0.011 T 15-10-2018 IPR004176 Clp, N-terminal XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 782 856 6.6E-15 T 15-10-2018 IPR019489 Clp ATPase, C-terminal XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 Gene3D G3DSA:3.40.50.300 175 368 5.9E-62 T 15-10-2018 XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 SUPERFAMILY SSF52540 187 523 2.95E-73 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2030 8cfeab999b037b210cd1b08380a2fccc 878 Pfam PF07724 AAA domain (Cdc48 subfamily) 609 775 2.7E-39 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_2492 745c9449d55fd82a735e6aaff4fd5d38 341 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 10 289 2.0E-93 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XDD1_2492 745c9449d55fd82a735e6aaff4fd5d38 341 Gene3D G3DSA:3.20.20.300 1 340 1.9E-127 T 15-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 XDD1_2492 745c9449d55fd82a735e6aaff4fd5d38 341 SUPERFAMILY SSF51445 2 290 1.37E-84 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily XDD1_2492 745c9449d55fd82a735e6aaff4fd5d38 341 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 333 48.141 T 15-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 XDD1_2492 745c9449d55fd82a735e6aaff4fd5d38 341 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 15-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 XDD1_3845 2ffab12e6072ed31da34e459ba1e6c87 493 SUPERFAMILY SSF103473 4 490 1.44E-65 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_3845 2ffab12e6072ed31da34e459ba1e6c87 493 Gene3D G3DSA:1.20.1720.10 9 216 1.2E-42 T 15-10-2018 XDD1_3845 2ffab12e6072ed31da34e459ba1e6c87 493 PRINTS PR01036 Tetracycline resistance protein TetB signature 72 94 2.9E-5 T 15-10-2018 XDD1_3845 2ffab12e6072ed31da34e459ba1e6c87 493 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 2.9E-5 T 15-10-2018 XDD1_3845 2ffab12e6072ed31da34e459ba1e6c87 493 PRINTS PR01036 Tetracycline resistance protein TetB signature 395 414 2.9E-5 T 15-10-2018 XDD1_3845 2ffab12e6072ed31da34e459ba1e6c87 493 PRINTS PR01036 Tetracycline resistance protein TetB signature 194 212 2.9E-5 T 15-10-2018 XDD1_3845 2ffab12e6072ed31da34e459ba1e6c87 493 Gene3D G3DSA:1.20.1250.20 260 492 1.1E-17 T 15-10-2018 XDD1_3845 2ffab12e6072ed31da34e459ba1e6c87 493 Pfam PF07690 Major Facilitator Superfamily 14 404 9.6E-54 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0345 e77df163dbcfa1256c029ac3e7335831 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 3.1E-32 T 15-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 XDD1_0345 e77df163dbcfa1256c029ac3e7335831 419 SMART SM00382 170 355 5.0E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0345 e77df163dbcfa1256c029ac3e7335831 419 SMART SM00959 5 47 3.1E-17 T 15-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 XDD1_0345 e77df163dbcfa1256c029ac3e7335831 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 249.686 T 15-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 XDD1_0345 e77df163dbcfa1256c029ac3e7335831 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 6.4E-23 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XDD1_0345 e77df163dbcfa1256c029ac3e7335831 419 SUPERFAMILY SSF68912 1 46 3.92E-12 T 15-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily XDD1_0345 e77df163dbcfa1256c029ac3e7335831 419 Gene3D G3DSA:3.40.50.300 130 417 1.5E-134 T 15-10-2018 XDD1_0345 e77df163dbcfa1256c029ac3e7335831 419 Gene3D G3DSA:1.10.720.10 1 47 2.7E-24 T 15-10-2018 XDD1_0345 e77df163dbcfa1256c029ac3e7335831 419 SMART SM00357 52 118 9.6E-19 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 XDD1_0345 e77df163dbcfa1256c029ac3e7335831 419 SUPERFAMILY SSF52540 90 371 5.56E-68 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0345 e77df163dbcfa1256c029ac3e7335831 419 SUPERFAMILY SSF50249 48 125 9.0E-30 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_0345 e77df163dbcfa1256c029ac3e7335831 419 Gene3D G3DSA:2.40.50.140 48 117 1.3E-35 T 15-10-2018 XDD1_0345 e77df163dbcfa1256c029ac3e7335831 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.7E-221 T 15-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 XDD1_0345 e77df163dbcfa1256c029ac3e7335831 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 2.0E-16 T 15-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 XDD1_3865 ec014964e826eae5cf160218c1209613 781 SUPERFAMILY SSF50249 636 722 1.78E-25 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_3865 ec014964e826eae5cf160218c1209613 781 SUPERFAMILY SSF53098 322 468 3.29E-49 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3865 ec014964e826eae5cf160218c1209613 781 Pfam PF12836 Helix-hairpin-helix motif 490 554 1.9E-26 T 15-10-2018 XDD1_3865 ec014964e826eae5cf160218c1209613 781 Gene3D G3DSA:3.30.420.140 325 450 1.9E-155 T 15-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 XDD1_3865 ec014964e826eae5cf160218c1209613 781 Gene3D G3DSA:1.10.3500.10 112 497 1.9E-155 T 15-10-2018 IPR023323 Tex-like domain superfamily XDD1_3865 ec014964e826eae5cf160218c1209613 781 Gene3D G3DSA:1.10.150.310 498 629 4.4E-50 T 15-10-2018 XDD1_3865 ec014964e826eae5cf160218c1209613 781 SMART SM00732 326 423 2.1E-36 T 15-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 XDD1_3865 ec014964e826eae5cf160218c1209613 781 SUPERFAMILY SSF47781 559 631 2.52E-20 T 15-10-2018 IPR010994 RuvA domain 2-like XDD1_3865 ec014964e826eae5cf160218c1209613 781 SMART SM00316 648 719 3.8E-26 T 15-10-2018 IPR022967 RNA-binding domain, S1 XDD1_3865 ec014964e826eae5cf160218c1209613 781 SUPERFAMILY SSF158832 2 321 1.44E-119 T 15-10-2018 XDD1_3865 ec014964e826eae5cf160218c1209613 781 Gene3D G3DSA:1.10.10.650 2 109 1.2E-40 T 15-10-2018 IPR023319 Tex-like protein, HTH domain superfamily XDD1_3865 ec014964e826eae5cf160218c1209613 781 Pfam PF16921 Tex protein YqgF-like domain 327 450 9.8E-51 T 15-10-2018 IPR032639 Tex protein, YqgF-like domain XDD1_3865 ec014964e826eae5cf160218c1209613 781 Gene3D G3DSA:2.40.50.140 630 723 1.8E-28 T 15-10-2018 XDD1_3865 ec014964e826eae5cf160218c1209613 781 Pfam PF09371 Tex-like protein N-terminal domain 9 193 3.3E-69 T 15-10-2018 IPR018974 Tex-like protein, N-terminal XDD1_3865 ec014964e826eae5cf160218c1209613 781 SUPERFAMILY SSF47781 469 556 6.0E-27 T 15-10-2018 IPR010994 RuvA domain 2-like XDD1_3865 ec014964e826eae5cf160218c1209613 781 Pfam PF00575 S1 RNA binding domain 647 719 2.0E-22 T 15-10-2018 IPR003029 S1 domain GO:0003676 XDD1_2590 05b746d78402b431bf7ec19639f7ed65 910 SUPERFAMILY SSF50692 818 894 1.08E-9 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily XDD1_2590 05b746d78402b431bf7ec19639f7ed65 910 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 224 277 3.7E-9 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2590 05b746d78402b431bf7ec19639f7ed65 910 Gene3D G3DSA:2.20.25.90 224 278 5.8E-12 T 15-10-2018 XDD1_2590 05b746d78402b431bf7ec19639f7ed65 910 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 5 81 1.8E-11 T 15-10-2018 XDD1_2590 05b746d78402b431bf7ec19639f7ed65 910 Gene3D G3DSA:3.10.20.740 4 130 1.5E-28 T 15-10-2018 XDD1_2590 05b746d78402b431bf7ec19639f7ed65 910 SUPERFAMILY SSF54292 4 80 1.45E-18 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 XDD1_2590 05b746d78402b431bf7ec19639f7ed65 910 SMART SM00929 91 131 2.4E-18 T 15-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2590 05b746d78402b431bf7ec19639f7ed65 910 SUPERFAMILY SSF53706 222 692 3.83E-77 T 15-10-2018 XDD1_2590 05b746d78402b431bf7ec19639f7ed65 910 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 7 658 3.3E-199 T 15-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2590 05b746d78402b431bf7ec19639f7ed65 910 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 153 163 - T 15-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2590 05b746d78402b431bf7ec19639f7ed65 910 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 106 118 - T 15-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2590 05b746d78402b431bf7ec19639f7ed65 910 Gene3D G3DSA:3.40.50.740 471 693 3.5E-12 T 15-10-2018 XDD1_2590 05b746d78402b431bf7ec19639f7ed65 910 Pfam PF00384 Molybdopterin oxidoreductase 561 645 1.7E-6 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2590 05b746d78402b431bf7ec19639f7ed65 910 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 34 51 - T 15-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2590 05b746d78402b431bf7ec19639f7ed65 910 SUPERFAMILY SSF54862 84 216 7.53E-33 T 15-10-2018 XDD1_2590 05b746d78402b431bf7ec19639f7ed65 910 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 91 126 2.2E-14 T 15-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2590 05b746d78402b431bf7ec19639f7ed65 910 Gene3D G3DSA:2.40.40.20 807 906 6.5E-6 T 15-10-2018 XDD1_2590 05b746d78402b431bf7ec19639f7ed65 910 SMART SM00926 224 278 3.8E-8 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_0036 3e6adcceffafd1d227a5e863ec485b7d 513 SUPERFAMILY SSF47917 383 511 4.71E-45 T 15-10-2018 XDD1_0036 3e6adcceffafd1d227a5e863ec485b7d 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 4.0E-44 T 15-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0036 3e6adcceffafd1d227a5e863ec485b7d 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 15-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XDD1_0036 3e6adcceffafd1d227a5e863ec485b7d 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 1.6E-13 T 15-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XDD1_0036 3e6adcceffafd1d227a5e863ec485b7d 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 2.1E-72 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XDD1_0036 3e6adcceffafd1d227a5e863ec485b7d 513 Gene3D G3DSA:2.40.30.20 1 93 9.3E-30 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XDD1_0036 3e6adcceffafd1d227a5e863ec485b7d 513 Gene3D G3DSA:1.20.150.20 383 513 3.0E-48 T 15-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0036 3e6adcceffafd1d227a5e863ec485b7d 513 SUPERFAMILY SSF50615 10 94 4.91E-26 T 15-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XDD1_0036 3e6adcceffafd1d227a5e863ec485b7d 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.284 T 15-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0036 3e6adcceffafd1d227a5e863ec485b7d 513 Gene3D G3DSA:3.40.50.300 94 382 2.4E-131 T 15-10-2018 XDD1_0036 3e6adcceffafd1d227a5e863ec485b7d 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 3.3E-259 T 15-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0036 3e6adcceffafd1d227a5e863ec485b7d 513 SUPERFAMILY SSF52540 96 381 5.32E-94 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 Gene3D G3DSA:2.60.34.10 388 517 8.9E-50 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 614 1.3E-271 T 15-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 Gene3D G3DSA:3.90.640.10 238 310 1.0E-111 T 15-10-2018 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 Gene3D G3DSA:3.30.420.40 194 360 1.0E-111 T 15-10-2018 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 615 45.639 T 15-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 Gene3D G3DSA:1.20.1270.10 519 614 3.0E-28 T 15-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 Gene3D G3DSA:3.30.420.40 23 373 1.0E-111 T 15-10-2018 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 PRINTS PR00301 70kDa heat shock protein signature 465 481 7.2E-54 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 PRINTS PR00301 70kDa heat shock protein signature 70 78 7.2E-54 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 PRINTS PR00301 70kDa heat shock protein signature 20 33 7.2E-54 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 PRINTS PR00301 70kDa heat shock protein signature 152 172 7.2E-54 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 PRINTS PR00301 70kDa heat shock protein signature 384 403 7.2E-54 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 PRINTS PR00301 70kDa heat shock protein signature 211 221 7.2E-54 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 PRINTS PR00301 70kDa heat shock protein signature 328 344 7.2E-54 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 PRINTS PR00301 70kDa heat shock protein signature 359 379 7.2E-54 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 SUPERFAMILY SSF100920 383 534 6.41E-51 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 Pfam PF00012 Hsp70 protein 22 599 4.4E-195 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 SUPERFAMILY SSF53067 20 196 2.17E-51 T 15-10-2018 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 SUPERFAMILY SSF100934 503 614 1.04E-36 T 15-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 XDD1_2783 991f00142dd33d5a9ff6b9867cda64f7 615 SUPERFAMILY SSF53067 200 376 6.41E-48 T 15-10-2018 XDD1_0327 51c8618424351e5cd78a57d217716bf7 112 Pfam PF04219 Protein of unknown function, DUF 10 98 4.3E-39 T 15-10-2018 IPR007335 Protein of unknown function DUF413 XDD1_2106 0514aaa658358fd8aa560cf42453bd7a 176 SUPERFAMILY SSF49401 26 176 2.68E-35 T 15-10-2018 IPR008966 Adhesion domain superfamily XDD1_2106 0514aaa658358fd8aa560cf42453bd7a 176 Gene3D G3DSA:2.60.40.1090 23 176 2.6E-44 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 XDD1_2106 0514aaa658358fd8aa560cf42453bd7a 176 Pfam PF00419 Fimbrial protein 28 176 8.8E-18 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 XDD1_1295 f91495589abb309771eb4a26b2fb3307 127 ProDom PD394905 PM1122 UNCHARACTERIZED 27 107 2.0E-19 T 15-10-2018 XDD1_2629 c760e0c2a0bff99f1698c1dd92fdfd4f 510 Pfam PF00221 Aromatic amino acid lyase 11 470 7.2E-190 T 15-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 XDD1_2629 c760e0c2a0bff99f1698c1dd92fdfd4f 510 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 15-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 XDD1_2629 c760e0c2a0bff99f1698c1dd92fdfd4f 510 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 504 1.7E-223 T 15-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 XDD1_2629 c760e0c2a0bff99f1698c1dd92fdfd4f 510 Gene3D G3DSA:1.10.275.10 2 197 8.3E-73 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal XDD1_2629 c760e0c2a0bff99f1698c1dd92fdfd4f 510 Gene3D G3DSA:1.20.200.10 198 508 8.5E-124 T 15-10-2018 XDD1_2629 c760e0c2a0bff99f1698c1dd92fdfd4f 510 SUPERFAMILY SSF48557 3 498 2.98E-194 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 XDD1_2629 c760e0c2a0bff99f1698c1dd92fdfd4f 510 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.973 T 15-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 XDD1_2956 70a938254d9d6c7c3eadedda0cedf93c 173 Pfam PF00258 Flavodoxin 6 161 5.3E-24 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 XDD1_2956 70a938254d9d6c7c3eadedda0cedf93c 173 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 15-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 XDD1_2956 70a938254d9d6c7c3eadedda0cedf93c 173 SUPERFAMILY SSF52218 1 169 4.81E-45 T 15-10-2018 IPR029039 Flavoprotein-like superfamily XDD1_2956 70a938254d9d6c7c3eadedda0cedf93c 173 Gene3D G3DSA:3.40.50.360 2 173 5.5E-47 T 15-10-2018 IPR029039 Flavoprotein-like superfamily XDD1_2956 70a938254d9d6c7c3eadedda0cedf93c 173 TIGRFAM TIGR01752 flav_long: flavodoxin 3 169 4.2E-68 T 15-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 XDD1_2956 70a938254d9d6c7c3eadedda0cedf93c 173 PIRSF PIRSF038996 1 172 3.1E-55 T 15-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 XDD1_3069 769bc3a536cf562ac9a1c4154df26a71 209 Gene3D G3DSA:3.40.50.12740 3 207 8.0E-57 T 15-10-2018 XDD1_3069 769bc3a536cf562ac9a1c4154df26a71 209 SUPERFAMILY SSF52172 1 126 8.4E-30 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_3069 769bc3a536cf562ac9a1c4154df26a71 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 5.0E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_3069 769bc3a536cf562ac9a1c4154df26a71 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 5.0E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_3069 769bc3a536cf562ac9a1c4154df26a71 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 5.0E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_3069 769bc3a536cf562ac9a1c4154df26a71 209 SMART SM00448 3 116 3.5E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_3069 769bc3a536cf562ac9a1c4154df26a71 209 Pfam PF00072 Response regulator receiver domain 5 117 3.8E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_3069 769bc3a536cf562ac9a1c4154df26a71 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_3069 769bc3a536cf562ac9a1c4154df26a71 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 201 7.7E-18 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_3069 769bc3a536cf562ac9a1c4154df26a71 209 SMART SM00421 144 201 6.6E-20 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_3069 769bc3a536cf562ac9a1c4154df26a71 209 SUPERFAMILY SSF46894 136 207 4.76E-20 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XDD1_3468 2511be122197ef94eb06a97e9abfbda8 140 Pfam PF13279 Thioesterase-like superfamily 15 127 9.8E-13 T 15-10-2018 XDD1_3468 2511be122197ef94eb06a97e9abfbda8 140 SUPERFAMILY SSF54637 7 132 1.93E-33 T 15-10-2018 IPR029069 HotDog domain superfamily XDD1_3468 2511be122197ef94eb06a97e9abfbda8 140 Gene3D G3DSA:3.10.129.10 5 137 6.9E-30 T 15-10-2018 XDD1_3468 2511be122197ef94eb06a97e9abfbda8 140 PIRSF PIRSF003230 2 136 5.5E-23 T 15-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 XDD1_3508 809ad62e596c9b06432929b7248bf47d 213 SUPERFAMILY SSF52833 11 110 7.75E-22 T 15-10-2018 IPR036249 Thioredoxin-like superfamily XDD1_3508 809ad62e596c9b06432929b7248bf47d 213 Gene3D G3DSA:3.40.30.10 11 202 9.2E-78 T 15-10-2018 XDD1_3508 809ad62e596c9b06432929b7248bf47d 213 SUPERFAMILY SSF47616 82 208 3.63E-25 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily XDD1_3508 809ad62e596c9b06432929b7248bf47d 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 194 2.7E-8 T 15-10-2018 IPR004046 Glutathione S-transferase, C-terminal XDD1_3508 809ad62e596c9b06432929b7248bf47d 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 2.2E-17 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 XDD1_3508 809ad62e596c9b06432929b7248bf47d 213 Gene3D G3DSA:1.20.1050.10 89 193 9.2E-78 T 15-10-2018 XDD1_2608 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13551 Winged helix-turn helix 40 96 1.9E-8 T 15-10-2018 XDD1_2608 5b8d6f1d1186e851715dd17f7138d10d 357 SUPERFAMILY SSF53098 230 330 1.12E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_2608 5b8d6f1d1186e851715dd17f7138d10d 357 SUPERFAMILY SSF46689 25 139 3.14E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2608 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13592 Winged helix-turn helix 108 163 3.5E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_2608 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13358 DDE superfamily endonuclease 177 321 3.1E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2608 5b8d6f1d1186e851715dd17f7138d10d 357 Gene3D G3DSA:3.30.420.470 143 350 8.2E-12 T 15-10-2018 XDD1_1917 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13551 Winged helix-turn helix 40 96 1.9E-8 T 15-10-2018 XDD1_1917 5b8d6f1d1186e851715dd17f7138d10d 357 SUPERFAMILY SSF53098 230 330 1.12E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_1917 5b8d6f1d1186e851715dd17f7138d10d 357 SUPERFAMILY SSF46689 25 139 3.14E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1917 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13592 Winged helix-turn helix 108 163 3.5E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_1917 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13358 DDE superfamily endonuclease 177 321 3.1E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_1917 5b8d6f1d1186e851715dd17f7138d10d 357 Gene3D G3DSA:3.30.420.470 143 350 8.2E-12 T 15-10-2018 XDD1_0550 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13551 Winged helix-turn helix 40 96 1.9E-8 T 15-10-2018 XDD1_0550 5b8d6f1d1186e851715dd17f7138d10d 357 SUPERFAMILY SSF53098 230 330 1.12E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0550 5b8d6f1d1186e851715dd17f7138d10d 357 SUPERFAMILY SSF46689 25 139 3.14E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0550 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13592 Winged helix-turn helix 108 163 3.5E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_0550 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13358 DDE superfamily endonuclease 177 321 3.1E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0550 5b8d6f1d1186e851715dd17f7138d10d 357 Gene3D G3DSA:3.30.420.470 143 350 8.2E-12 T 15-10-2018 XDD1_2028 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13551 Winged helix-turn helix 40 96 1.9E-8 T 15-10-2018 XDD1_2028 5b8d6f1d1186e851715dd17f7138d10d 357 SUPERFAMILY SSF53098 230 330 1.12E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_2028 5b8d6f1d1186e851715dd17f7138d10d 357 SUPERFAMILY SSF46689 25 139 3.14E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2028 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13592 Winged helix-turn helix 108 163 3.5E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_2028 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13358 DDE superfamily endonuclease 177 321 3.1E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2028 5b8d6f1d1186e851715dd17f7138d10d 357 Gene3D G3DSA:3.30.420.470 143 350 8.2E-12 T 15-10-2018 XDD1_1499 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13551 Winged helix-turn helix 40 96 1.9E-8 T 15-10-2018 XDD1_1499 5b8d6f1d1186e851715dd17f7138d10d 357 SUPERFAMILY SSF53098 230 330 1.12E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_1499 5b8d6f1d1186e851715dd17f7138d10d 357 SUPERFAMILY SSF46689 25 139 3.14E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1499 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13592 Winged helix-turn helix 108 163 3.5E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_1499 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13358 DDE superfamily endonuclease 177 321 3.1E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_1499 5b8d6f1d1186e851715dd17f7138d10d 357 Gene3D G3DSA:3.30.420.470 143 350 8.2E-12 T 15-10-2018 XDD1_0718 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13551 Winged helix-turn helix 40 96 1.9E-8 T 15-10-2018 XDD1_0718 5b8d6f1d1186e851715dd17f7138d10d 357 SUPERFAMILY SSF53098 230 330 1.12E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0718 5b8d6f1d1186e851715dd17f7138d10d 357 SUPERFAMILY SSF46689 25 139 3.14E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0718 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13592 Winged helix-turn helix 108 163 3.5E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_0718 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13358 DDE superfamily endonuclease 177 321 3.1E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0718 5b8d6f1d1186e851715dd17f7138d10d 357 Gene3D G3DSA:3.30.420.470 143 350 8.2E-12 T 15-10-2018 XDD1_1951 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13551 Winged helix-turn helix 40 96 1.9E-8 T 15-10-2018 XDD1_1951 5b8d6f1d1186e851715dd17f7138d10d 357 SUPERFAMILY SSF53098 230 330 1.12E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_1951 5b8d6f1d1186e851715dd17f7138d10d 357 SUPERFAMILY SSF46689 25 139 3.14E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1951 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13592 Winged helix-turn helix 108 163 3.5E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_1951 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13358 DDE superfamily endonuclease 177 321 3.1E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_1951 5b8d6f1d1186e851715dd17f7138d10d 357 Gene3D G3DSA:3.30.420.470 143 350 8.2E-12 T 15-10-2018 XDD1_0258 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13551 Winged helix-turn helix 40 96 1.9E-8 T 15-10-2018 XDD1_0258 5b8d6f1d1186e851715dd17f7138d10d 357 SUPERFAMILY SSF53098 230 330 1.12E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0258 5b8d6f1d1186e851715dd17f7138d10d 357 SUPERFAMILY SSF46689 25 139 3.14E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0258 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13592 Winged helix-turn helix 108 163 3.5E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_0258 5b8d6f1d1186e851715dd17f7138d10d 357 Pfam PF13358 DDE superfamily endonuclease 177 321 3.1E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0258 5b8d6f1d1186e851715dd17f7138d10d 357 Gene3D G3DSA:3.30.420.470 143 350 8.2E-12 T 15-10-2018 XDD1_3085 a1a4a8e927cfefef190690674700e4d7 406 Pfam PF04860 Phage portal protein 43 377 8.8E-89 T 15-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein XDD1_3085 a1a4a8e927cfefef190690674700e4d7 406 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 35 383 1.2E-74 T 15-10-2018 IPR006427 Phage portal protein, HK97 XDD1_0940 8e3300d96b317117289b8453aeaf78d6 164 PIRSF PIRSF001467 1 164 1.9E-29 T 15-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 XDD1_0940 8e3300d96b317117289b8453aeaf78d6 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 15-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 XDD1_0940 8e3300d96b317117289b8453aeaf78d6 164 Gene3D G3DSA:2.40.100.10 1 164 1.8E-71 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily XDD1_0940 8e3300d96b317117289b8453aeaf78d6 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 4.4E-12 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XDD1_0940 8e3300d96b317117289b8453aeaf78d6 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 4.4E-12 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XDD1_0940 8e3300d96b317117289b8453aeaf78d6 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 4.4E-12 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XDD1_0940 8e3300d96b317117289b8453aeaf78d6 164 SUPERFAMILY SSF50891 1 162 1.46E-59 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily XDD1_0940 8e3300d96b317117289b8453aeaf78d6 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 161 4.1E-47 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XDD1_2074 706f9c2332361edc40bb3d4148d4f951 480 SUPERFAMILY SSF50800 74 168 2.79E-24 T 15-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily XDD1_2074 706f9c2332361edc40bb3d4148d4f951 480 Gene3D G3DSA:2.40.33.10 74 172 1.1E-154 T 15-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_2074 706f9c2332361edc40bb3d4148d4f951 480 SUPERFAMILY SSF52935 329 479 3.14E-39 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_2074 706f9c2332361edc40bb3d4148d4f951 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 6.9E-30 T 15-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_2074 706f9c2332361edc40bb3d4148d4f951 480 Gene3D G3DSA:3.40.1380.20 342 475 1.1E-154 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_2074 706f9c2332361edc40bb3d4148d4f951 480 SUPERFAMILY SSF51621 4 345 2.83E-87 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XDD1_2074 706f9c2332361edc40bb3d4148d4f951 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 7.6E-171 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_2074 706f9c2332361edc40bb3d4148d4f951 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 2.3E-51 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_2074 706f9c2332361edc40bb3d4148d4f951 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 2.3E-51 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_2074 706f9c2332361edc40bb3d4148d4f951 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 2.3E-51 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_2074 706f9c2332361edc40bb3d4148d4f951 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 2.3E-51 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_2074 706f9c2332361edc40bb3d4148d4f951 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 2.3E-51 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_2074 706f9c2332361edc40bb3d4148d4f951 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 2.3E-51 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_2074 706f9c2332361edc40bb3d4148d4f951 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 2.3E-51 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_2074 706f9c2332361edc40bb3d4148d4f951 480 Gene3D G3DSA:3.20.20.60 6 341 1.1E-154 T 15-10-2018 XDD1_2074 706f9c2332361edc40bb3d4148d4f951 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 1.5E-129 T 15-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_1551 404c16f5b374b1464800f96722c54f2c 73 Gene3D G3DSA:2.40.50.140 2 71 3.4E-33 T 15-10-2018 XDD1_1551 404c16f5b374b1464800f96722c54f2c 73 SUPERFAMILY SSF50249 5 71 5.15E-26 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_1551 404c16f5b374b1464800f96722c54f2c 73 SMART SM00316 5 73 5.7E-5 T 15-10-2018 IPR022967 RNA-binding domain, S1 XDD1_1551 404c16f5b374b1464800f96722c54f2c 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 5 72 3.8E-34 T 15-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 XDD1_1551 404c16f5b374b1464800f96722c54f2c 73 Pfam PF01176 Translation initiation factor 1A / IF-1 9 71 8.1E-26 T 15-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 XDD1_1551 404c16f5b374b1464800f96722c54f2c 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 73 24.125 T 15-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 XDD1_1280 e78965e88b8e18c2982aff62485a2695 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 238 9.0E-27 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_1280 e78965e88b8e18c2982aff62485a2695 246 Gene3D G3DSA:1.10.3720.10 18 239 5.5E-45 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_1280 e78965e88b8e18c2982aff62485a2695 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 132 6.7E-16 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 XDD1_1280 e78965e88b8e18c2982aff62485a2695 246 SUPERFAMILY SSF161098 24 223 1.83E-38 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_0341 d879fdba43ccef0e6fa67f11b734c373 502 Pfam PF02541 Ppx/GppA phosphatase family 21 301 7.0E-91 T 15-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 XDD1_0341 d879fdba43ccef0e6fa67f11b734c373 502 SUPERFAMILY SSF53067 132 301 4.26E-39 T 15-10-2018 XDD1_0341 d879fdba43ccef0e6fa67f11b734c373 502 Gene3D G3DSA:3.30.420.40 9 297 2.9E-82 T 15-10-2018 XDD1_0341 d879fdba43ccef0e6fa67f11b734c373 502 PIRSF PIRSF001267 1 496 7.2E-177 T 15-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 XDD1_0341 d879fdba43ccef0e6fa67f11b734c373 502 SUPERFAMILY SSF109604 307 494 1.19E-44 T 15-10-2018 XDD1_0341 d879fdba43ccef0e6fa67f11b734c373 502 SUPERFAMILY SSF53067 7 128 2.14E-37 T 15-10-2018 XDD1_0341 d879fdba43ccef0e6fa67f11b734c373 502 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 494 52.446 T 15-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 XDD1_0341 d879fdba43ccef0e6fa67f11b734c373 502 Gene3D G3DSA:3.30.420.150 112 289 2.9E-82 T 15-10-2018 XDD1_0341 d879fdba43ccef0e6fa67f11b734c373 502 Gene3D G3DSA:1.10.3210.10 305 501 2.8E-51 T 15-10-2018 XDD1_3698 ab41ceeef8f3657c2f9673d729b17760 123 PIRSF PIRSF019853 1 123 1.6E-24 T 15-10-2018 IPR016767 Uncharacterised conserved protein UCP019853 XDD1_0047 17cfdd243a66d5d55a6e6909e1aaa510 485 Hamap MF_01626 Protein ViaA [viaA]. 1 485 53.053 T 15-10-2018 IPR023481 Uncharacterised protein family ViaA XDD1_0047 17cfdd243a66d5d55a6e6909e1aaa510 485 SMART SM00327 321 485 2.8E-7 T 15-10-2018 IPR002035 von Willebrand factor, type A XDD1_0047 17cfdd243a66d5d55a6e6909e1aaa510 485 Pfam PF05762 VWA domain containing CoxE-like protein 309 446 2.0E-10 T 15-10-2018 IPR008912 Uncharacterised protein family CoxE-like XDD1_0047 17cfdd243a66d5d55a6e6909e1aaa510 485 SUPERFAMILY SSF53300 320 461 1.88E-16 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily XDD1_0047 17cfdd243a66d5d55a6e6909e1aaa510 485 Gene3D G3DSA:3.40.50.410 312 446 9.1E-6 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily XDD1_2206 a0471627512c1a33483099854ace9d78 324 Gene3D G3DSA:3.40.190.10 93 303 7.2E-97 T 15-10-2018 XDD1_2206 a0471627512c1a33483099854ace9d78 324 SUPERFAMILY SSF53850 91 322 5.91E-43 T 15-10-2018 XDD1_2206 a0471627512c1a33483099854ace9d78 324 SUPERFAMILY SSF46785 1 113 3.74E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_2206 a0471627512c1a33483099854ace9d78 324 Gene3D G3DSA:1.10.10.10 1 86 9.1E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2206 a0471627512c1a33483099854ace9d78 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2206 a0471627512c1a33483099854ace9d78 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2206 a0471627512c1a33483099854ace9d78 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2206 a0471627512c1a33483099854ace9d78 324 Pfam PF03466 LysR substrate binding domain 91 288 3.9E-41 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_2206 a0471627512c1a33483099854ace9d78 324 Gene3D G3DSA:3.40.190.10 167 267 7.2E-97 T 15-10-2018 XDD1_2206 a0471627512c1a33483099854ace9d78 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 2.1E-14 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0650 84ab59615a3938c802fb569c5616ff40 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 3.2E-24 T 15-10-2018 IPR013185 Translation elongation factor, KOW-like XDD1_0650 84ab59615a3938c802fb569c5616ff40 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 9.8E-26 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 XDD1_0650 84ab59615a3938c802fb569c5616ff40 188 SUPERFAMILY SSF50104 2 63 1.45E-20 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily XDD1_0650 84ab59615a3938c802fb569c5616ff40 188 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 4.7E-77 T 15-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 XDD1_0650 84ab59615a3938c802fb569c5616ff40 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 15-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site XDD1_0650 84ab59615a3938c802fb569c5616ff40 188 PIRSF PIRSF005901 2 188 3.7E-67 T 15-10-2018 IPR020599 Translation elongation factor P/YeiP XDD1_0650 84ab59615a3938c802fb569c5616ff40 188 SUPERFAMILY SSF50249 130 187 1.58E-18 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_0650 84ab59615a3938c802fb569c5616ff40 188 Gene3D G3DSA:2.30.30.30 1 65 1.4E-27 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 XDD1_0650 84ab59615a3938c802fb569c5616ff40 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 8.7E-22 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 XDD1_0650 84ab59615a3938c802fb569c5616ff40 188 SMART SM00841 131 186 3.0E-32 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 XDD1_0650 84ab59615a3938c802fb569c5616ff40 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.576 T 15-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 XDD1_0650 84ab59615a3938c802fb569c5616ff40 188 SUPERFAMILY SSF50249 69 128 2.44E-17 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_0650 84ab59615a3938c802fb569c5616ff40 188 Gene3D G3DSA:2.40.50.140 130 188 1.3E-27 T 15-10-2018 XDD1_0650 84ab59615a3938c802fb569c5616ff40 188 SMART SM01185 69 123 1.1E-25 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 XDD1_0650 84ab59615a3938c802fb569c5616ff40 188 Gene3D G3DSA:2.40.50.140 66 129 7.0E-30 T 15-10-2018 XDD1_2037 1874e26e0bcd07449568ab1d27602025 176 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 10 160 8.4E-60 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 XDD1_2037 1874e26e0bcd07449568ab1d27602025 176 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 161 9.0E-59 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 XDD1_2037 1874e26e0bcd07449568ab1d27602025 176 PIRSF PIRSF028301 1 175 6.7E-62 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 XDD1_2974 05a11ed478175e5e46c1b48a525cf7b3 366 SUPERFAMILY SSF103025 3 277 1.23E-91 T 15-10-2018 XDD1_2974 05a11ed478175e5e46c1b48a525cf7b3 366 Gene3D G3DSA:3.30.1360.120 6 231 1.3E-87 T 15-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 XDD1_2974 05a11ed478175e5e46c1b48a525cf7b3 366 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 8.4E-82 T 15-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain XDD1_2974 05a11ed478175e5e46c1b48a525cf7b3 366 Gene3D G3DSA:4.10.1250.10 232 276 9.2E-28 T 15-10-2018 XDD1_2974 05a11ed478175e5e46c1b48a525cf7b3 366 SUPERFAMILY SSF101790 271 359 5.23E-24 T 15-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal XDD1_2974 05a11ed478175e5e46c1b48a525cf7b3 366 PIRSF PIRSF006487 1 362 1.6E-78 T 15-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 XDD1_2974 05a11ed478175e5e46c1b48a525cf7b3 366 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 358 1.2E-149 T 15-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 XDD1_2974 05a11ed478175e5e46c1b48a525cf7b3 366 Gene3D G3DSA:3.30.70.1400 51 138 1.3E-87 T 15-10-2018 XDD1_2974 05a11ed478175e5e46c1b48a525cf7b3 366 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 353 9.2E-18 T 15-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 XDD1_2974 05a11ed478175e5e46c1b48a525cf7b3 366 Gene3D G3DSA:2.40.30.110 277 366 1.6E-32 T 15-10-2018 XDD1_2974 05a11ed478175e5e46c1b48a525cf7b3 366 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 43.359 T 15-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 XDD1_1317 02b0ef9d3da7ec5b35f9d6610201b443 269 Pfam PF00459 Inositol monophosphatase family 29 249 3.3E-38 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XDD1_1317 02b0ef9d3da7ec5b35f9d6610201b443 269 SUPERFAMILY SSF56655 1 264 2.09E-50 T 15-10-2018 XDD1_1317 02b0ef9d3da7ec5b35f9d6610201b443 269 Gene3D G3DSA:3.40.190.80 143 263 1.5E-17 T 15-10-2018 XDD1_1317 02b0ef9d3da7ec5b35f9d6610201b443 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 76 92 6.4E-14 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XDD1_1317 02b0ef9d3da7ec5b35f9d6610201b443 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 6.4E-14 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XDD1_1317 02b0ef9d3da7ec5b35f9d6610201b443 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 55 71 6.4E-14 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XDD1_1317 02b0ef9d3da7ec5b35f9d6610201b443 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 33 53 6.4E-14 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XDD1_1317 02b0ef9d3da7ec5b35f9d6610201b443 269 Gene3D G3DSA:3.30.540.10 1 133 1.6E-31 T 15-10-2018 XDD1_1317 02b0ef9d3da7ec5b35f9d6610201b443 269 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 76 89 - T 15-10-2018 IPR020583 Inositol monophosphatase, metal-binding site XDD1_1200 f082b4553bda591a425672e19e354972 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 7.4E-17 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 XDD1_1200 f082b4553bda591a425672e19e354972 875 SUPERFAMILY SSF55681 4 255 1.89E-108 T 15-10-2018 XDD1_1200 f082b4553bda591a425672e19e354972 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 XDD1_1200 f082b4553bda591a425672e19e354972 875 SMART SM00863 653 696 3.5E-20 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 XDD1_1200 f082b4553bda591a425672e19e354972 875 Gene3D G3DSA:3.30.54.20 624 677 2.0E-51 T 15-10-2018 XDD1_1200 f082b4553bda591a425672e19e354972 875 Pfam PF02272 DHHA1 domain 735 871 3.5E-28 T 15-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 XDD1_1200 f082b4553bda591a425672e19e354972 875 SUPERFAMILY SSF101353 256 464 1.19E-59 T 15-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 XDD1_1200 f082b4553bda591a425672e19e354972 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 204.925 T 15-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 XDD1_1200 f082b4553bda591a425672e19e354972 875 Pfam PF01411 tRNA synthetases class II (A) 7 553 9.5E-235 T 15-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 XDD1_1200 f082b4553bda591a425672e19e354972 875 SUPERFAMILY SSF55186 552 711 4.58E-52 T 15-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 XDD1_1200 f082b4553bda591a425672e19e354972 875 Gene3D G3DSA:3.10.310.40 764 872 4.0E-34 T 15-10-2018 XDD1_1200 f082b4553bda591a425672e19e354972 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 1.4E-32 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 XDD1_1200 f082b4553bda591a425672e19e354972 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 1.4E-32 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 XDD1_1200 f082b4553bda591a425672e19e354972 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 1.4E-32 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 XDD1_1200 f082b4553bda591a425672e19e354972 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.4E-32 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 XDD1_1200 f082b4553bda591a425672e19e354972 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 1.4E-32 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 XDD1_1200 f082b4553bda591a425672e19e354972 875 Gene3D G3DSA:2.40.30.130 461 552 1.1E-12 T 15-10-2018 XDD1_1200 f082b4553bda591a425672e19e354972 875 SUPERFAMILY SSF50447 455 552 3.11E-19 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XDD1_1200 f082b4553bda591a425672e19e354972 875 Gene3D G3DSA:3.30.930.10 2 252 4.1E-125 T 15-10-2018 XDD1_1200 f082b4553bda591a425672e19e354972 875 Gene3D G3DSA:3.30.980.10 563 697 2.0E-51 T 15-10-2018 XDD1_3684 8c08f421b040565b25793f4fac02a180 530 PIRSF PIRSF000538 11 519 5.0E-115 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 XDD1_3684 8c08f421b040565b25793f4fac02a180 530 Gene3D G3DSA:3.30.420.40 253 519 8.0E-51 T 15-10-2018 XDD1_3684 8c08f421b040565b25793f4fac02a180 530 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 13 260 1.6E-48 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 XDD1_3684 8c08f421b040565b25793f4fac02a180 530 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 300 467 1.7E-17 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 XDD1_3684 8c08f421b040565b25793f4fac02a180 530 Hamap MF_02053 Autoinducer-2 kinase [lsrK]. 15 530 78.756 T 15-10-2018 IPR033676 Autoinducer-2 kinase GO:0009372|GO:0071518 XDD1_3684 8c08f421b040565b25793f4fac02a180 530 SUPERFAMILY SSF53067 12 263 1.43E-57 T 15-10-2018 XDD1_3684 8c08f421b040565b25793f4fac02a180 530 SUPERFAMILY SSF53067 262 512 4.83E-48 T 15-10-2018 XDD1_3684 8c08f421b040565b25793f4fac02a180 530 Gene3D G3DSA:3.30.420.40 7 251 5.4E-61 T 15-10-2018 XDD1_0792 eaf0e674bbc54b935f3db3ad23ec969e 460 Gene3D G3DSA:3.30.230.10 310 460 2.3E-20 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XDD1_0792 eaf0e674bbc54b935f3db3ad23ec969e 460 Hamap MF_01498 DNA repair protein RadA [radA]. 22 457 43.009 T 15-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 XDD1_0792 eaf0e674bbc54b935f3db3ad23ec969e 460 SMART SM00382 93 246 4.3E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0792 eaf0e674bbc54b935f3db3ad23ec969e 460 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 3.1E-9 T 15-10-2018 XDD1_0792 eaf0e674bbc54b935f3db3ad23ec969e 460 Pfam PF13481 AAA domain 87 224 6.8E-14 T 15-10-2018 XDD1_0792 eaf0e674bbc54b935f3db3ad23ec969e 460 Gene3D G3DSA:3.40.50.300 68 281 1.9E-40 T 15-10-2018 XDD1_0792 eaf0e674bbc54b935f3db3ad23ec969e 460 SUPERFAMILY SSF54211 257 456 1.63E-41 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_0792 eaf0e674bbc54b935f3db3ad23ec969e 460 PRINTS PR01874 DNA repair protein radA signature 85 113 1.9E-93 T 15-10-2018 XDD1_0792 eaf0e674bbc54b935f3db3ad23ec969e 460 PRINTS PR01874 DNA repair protein radA signature 324 347 1.9E-93 T 15-10-2018 XDD1_0792 eaf0e674bbc54b935f3db3ad23ec969e 460 PRINTS PR01874 DNA repair protein radA signature 11 35 1.9E-93 T 15-10-2018 XDD1_0792 eaf0e674bbc54b935f3db3ad23ec969e 460 PRINTS PR01874 DNA repair protein radA signature 176 200 1.9E-93 T 15-10-2018 XDD1_0792 eaf0e674bbc54b935f3db3ad23ec969e 460 PRINTS PR01874 DNA repair protein radA signature 250 276 1.9E-93 T 15-10-2018 XDD1_0792 eaf0e674bbc54b935f3db3ad23ec969e 460 PRINTS PR01874 DNA repair protein radA signature 215 243 1.9E-93 T 15-10-2018 XDD1_0792 eaf0e674bbc54b935f3db3ad23ec969e 460 PRINTS PR01874 DNA repair protein radA signature 126 143 1.9E-93 T 15-10-2018 XDD1_0792 eaf0e674bbc54b935f3db3ad23ec969e 460 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 9.1E-235 T 15-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 XDD1_0792 eaf0e674bbc54b935f3db3ad23ec969e 460 SUPERFAMILY SSF52540 70 289 8.77E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3110 b5b145982a23252f7e11994b069a591f 776 PIRSF PIRSF002799 1 776 0.0 T 15-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_3110 b5b145982a23252f7e11994b069a591f 776 Gene3D G3DSA:3.40.710.10 61 719 1.4E-259 T 15-10-2018 XDD1_3110 b5b145982a23252f7e11994b069a591f 776 Pfam PF00905 Penicillin binding protein transpeptidase domain 430 674 6.9E-24 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XDD1_3110 b5b145982a23252f7e11994b069a591f 776 Gene3D G3DSA:1.10.3810.10 159 362 1.4E-259 T 15-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_3110 b5b145982a23252f7e11994b069a591f 776 Gene3D G3DSA:1.20.5.100 11 54 1.2E-16 T 15-10-2018 XDD1_3110 b5b145982a23252f7e11994b069a591f 776 Pfam PF14814 Bifunctional transglycosylase second domain 71 155 1.6E-29 T 15-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_3110 b5b145982a23252f7e11994b069a591f 776 Pfam PF00912 Transglycosylase 165 338 1.1E-54 T 15-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_3110 b5b145982a23252f7e11994b069a591f 776 SUPERFAMILY SSF56601 320 727 7.51E-107 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XDD1_3110 b5b145982a23252f7e11994b069a591f 776 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 26 752 0.0 T 15-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_3110 b5b145982a23252f7e11994b069a591f 776 Gene3D G3DSA:3.30.2060.10 69 158 1.4E-259 T 15-10-2018 XDD1_3110 b5b145982a23252f7e11994b069a591f 776 SUPERFAMILY SSF53955 155 363 7.03E-64 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily XDD1_0755 de5f307569e3d827cdc610bb8d591d17 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 1.0E-33 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0755 de5f307569e3d827cdc610bb8d591d17 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 9.9E-32 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0755 de5f307569e3d827cdc610bb8d591d17 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.545 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0755 de5f307569e3d827cdc610bb8d591d17 86 Pfam PF01649 Ribosomal protein S20 2 84 1.3E-28 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0755 de5f307569e3d827cdc610bb8d591d17 86 SUPERFAMILY SSF46992 3 86 2.88E-32 T 15-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0755 de5f307569e3d827cdc610bb8d591d17 86 Gene3D G3DSA:1.20.58.110 1 86 1.5E-31 T 15-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_2431 57aa46cd3fe45036b3c962af8e9e30b6 689 SUPERFAMILY SSF56024 500 683 4.93E-67 T 15-10-2018 XDD1_2431 57aa46cd3fe45036b3c962af8e9e30b6 689 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.274 T 15-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 XDD1_2431 57aa46cd3fe45036b3c962af8e9e30b6 689 Gene3D G3DSA:3.30.870.10 500 686 2.3E-71 T 15-10-2018 XDD1_2431 57aa46cd3fe45036b3c962af8e9e30b6 689 Gene3D G3DSA:1.20.58.310 9 109 1.5E-37 T 15-10-2018 XDD1_2431 57aa46cd3fe45036b3c962af8e9e30b6 689 SUPERFAMILY SSF56024 315 496 6.91E-56 T 15-10-2018 XDD1_2431 57aa46cd3fe45036b3c962af8e9e30b6 689 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 2.9E-253 T 15-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 XDD1_2431 57aa46cd3fe45036b3c962af8e9e30b6 689 Gene3D G3DSA:3.30.870.10 317 499 1.8E-73 T 15-10-2018 XDD1_2431 57aa46cd3fe45036b3c962af8e9e30b6 689 PIRSF PIRSF015589 1 688 2.2E-241 T 15-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 XDD1_2431 57aa46cd3fe45036b3c962af8e9e30b6 689 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 7.3E-32 T 15-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 XDD1_2431 57aa46cd3fe45036b3c962af8e9e30b6 689 SUPERFAMILY SSF143724 107 313 1.79E-60 T 15-10-2018 XDD1_2431 57aa46cd3fe45036b3c962af8e9e30b6 689 SUPERFAMILY SSF140356 4 105 1.57E-33 T 15-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 XDD1_2431 57aa46cd3fe45036b3c962af8e9e30b6 689 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 2.0E-142 T 15-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 XDD1_2431 57aa46cd3fe45036b3c962af8e9e30b6 689 Gene3D G3DSA:3.30.1840.10 110 307 3.4E-73 T 15-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 XDD1_2431 57aa46cd3fe45036b3c962af8e9e30b6 689 Pfam PF02503 Polyphosphate kinase middle domain 119 321 6.4E-44 T 15-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 XDD1_0841 a0080c5a8af188baae2702f55fe7ef53 349 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 1.4E-114 T 15-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 XDD1_0841 a0080c5a8af188baae2702f55fe7ef53 349 Gene3D G3DSA:3.90.650.10 146 323 9.6E-58 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XDD1_0841 a0080c5a8af188baae2702f55fe7ef53 349 PIRSF PIRSF005303 1 322 2.9E-89 T 15-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 XDD1_0841 a0080c5a8af188baae2702f55fe7ef53 349 SUPERFAMILY SSF55326 4 138 2.27E-34 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XDD1_0841 a0080c5a8af188baae2702f55fe7ef53 349 Gene3D G3DSA:3.30.1330.10 2 144 3.0E-46 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XDD1_0841 a0080c5a8af188baae2702f55fe7ef53 349 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 322 28.97 T 15-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 XDD1_0841 a0080c5a8af188baae2702f55fe7ef53 349 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 1.1E-21 T 15-10-2018 IPR016188 PurM-like, N-terminal domain XDD1_0841 a0080c5a8af188baae2702f55fe7ef53 349 SUPERFAMILY SSF56042 143 305 5.38E-41 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XDD1_0841 a0080c5a8af188baae2702f55fe7ef53 349 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 301 1.2E-9 T 15-10-2018 IPR010918 PurM-like, C-terminal domain XDD1_0424 17ec690fb77ccdf34746a5e8c3f82c4b 403 SUPERFAMILY SSF117892 122 256 2.09E-18 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily XDD1_0424 17ec690fb77ccdf34746a5e8c3f82c4b 403 Gene3D G3DSA:3.30.479.30 117 251 4.1E-16 T 15-10-2018 XDD1_0424 17ec690fb77ccdf34746a5e8c3f82c4b 403 SMART SM00244 89 249 2.6E-40 T 15-10-2018 IPR001107 Band 7 domain XDD1_0424 17ec690fb77ccdf34746a5e8c3f82c4b 403 Pfam PF12221 Bacterial membrane protein N terminal 1 58 7.1E-12 T 15-10-2018 IPR020980 Menbrane protein HflK, N-terminal XDD1_0424 17ec690fb77ccdf34746a5e8c3f82c4b 403 TIGRFAM TIGR01933 hflK: HflK protein 91 349 2.8E-115 T 15-10-2018 IPR010201 HflK GO:0016021 XDD1_0424 17ec690fb77ccdf34746a5e8c3f82c4b 403 PRINTS PR00721 Stomatin signature 96 118 6.1E-5 T 15-10-2018 IPR001972 Stomatin family GO:0016020 XDD1_0424 17ec690fb77ccdf34746a5e8c3f82c4b 403 PRINTS PR00721 Stomatin signature 178 195 6.1E-5 T 15-10-2018 IPR001972 Stomatin family GO:0016020 XDD1_0424 17ec690fb77ccdf34746a5e8c3f82c4b 403 PRINTS PR00721 Stomatin signature 143 164 6.1E-5 T 15-10-2018 IPR001972 Stomatin family GO:0016020 XDD1_0424 17ec690fb77ccdf34746a5e8c3f82c4b 403 Pfam PF01145 SPFH domain / Band 7 family 93 264 7.4E-30 T 15-10-2018 IPR001107 Band 7 domain XDD1_3326 155c8de17a0356566dbcf202eac8a408 591 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_3326 155c8de17a0356566dbcf202eac8a408 591 SUPERFAMILY SSF52540 349 565 1.29E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3326 155c8de17a0356566dbcf202eac8a408 591 Pfam PF00664 ABC transporter transmembrane region 23 280 5.5E-13 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XDD1_3326 155c8de17a0356566dbcf202eac8a408 591 SUPERFAMILY SSF90123 12 316 7.06E-45 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_3326 155c8de17a0356566dbcf202eac8a408 591 SMART SM00382 367 551 1.8E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3326 155c8de17a0356566dbcf202eac8a408 591 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 18 567 5.8E-236 T 15-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 XDD1_3326 155c8de17a0356566dbcf202eac8a408 591 Gene3D G3DSA:1.20.1560.10 8 318 1.8E-37 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_3326 155c8de17a0356566dbcf202eac8a408 591 Gene3D G3DSA:3.40.50.300 320 572 2.2E-66 T 15-10-2018 XDD1_3326 155c8de17a0356566dbcf202eac8a408 591 Pfam PF00005 ABC transporter 358 505 9.4E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_0122 cbb5db5d551a70728f5ba86bc8cafad3 286 SUPERFAMILY SSF47781 78 149 5.34E-9 T 15-10-2018 IPR010994 RuvA domain 2-like XDD1_0122 cbb5db5d551a70728f5ba86bc8cafad3 286 Pfam PF04002 RadC-like JAB domain 166 284 7.9E-43 T 15-10-2018 IPR025657 RadC-like JAB domain XDD1_0122 cbb5db5d551a70728f5ba86bc8cafad3 286 Hamap MF_00018 UPF0758 protein YicR [yicR]. 66 286 50.148 T 15-10-2018 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily XDD1_0122 cbb5db5d551a70728f5ba86bc8cafad3 286 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 235 240 - T 15-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site XDD1_0122 cbb5db5d551a70728f5ba86bc8cafad3 286 Gene3D G3DSA:3.40.140.10 163 286 1.4E-43 T 15-10-2018 XDD1_0122 cbb5db5d551a70728f5ba86bc8cafad3 286 TIGRFAM TIGR00608 radc: DNA repair protein RadC 74 286 3.2E-80 T 15-10-2018 IPR001405 Uncharacterised protein family UPF0758 XDD1_3650 1849175195e221cab9e2960ade0c6748 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 9.9E-71 T 15-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 XDD1_3650 1849175195e221cab9e2960ade0c6748 156 Gene3D G3DSA:1.10.455.10 2 155 2.1E-63 T 15-10-2018 IPR036823 Ribosomal protein S7 domain superfamily XDD1_3650 1849175195e221cab9e2960ade0c6748 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 15-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_3650 1849175195e221cab9e2960ade0c6748 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.0E-65 T 15-10-2018 IPR023798 Ribosomal protein S7 domain XDD1_3650 1849175195e221cab9e2960ade0c6748 156 SUPERFAMILY SSF47973 3 152 1.09E-59 T 15-10-2018 IPR036823 Ribosomal protein S7 domain superfamily XDD1_3650 1849175195e221cab9e2960ade0c6748 156 PIRSF PIRSF002122 3 156 5.0E-62 T 15-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 XDD1_3650 1849175195e221cab9e2960ade0c6748 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.406 T 15-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 XDD1_3028 bd834cd334f7a740e2ab5be4d2930600 335 SUPERFAMILY SSF53822 60 314 9.82E-44 T 15-10-2018 IPR028082 Periplasmic binding protein-like I XDD1_3028 bd834cd334f7a740e2ab5be4d2930600 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 15-10-2018 XDD1_3028 bd834cd334f7a740e2ab5be4d2930600 335 Gene3D G3DSA:1.10.260.40 1 61 1.8E-28 T 15-10-2018 XDD1_3028 bd834cd334f7a740e2ab5be4d2930600 335 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 270 9.0E-14 T 15-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain XDD1_3028 bd834cd334f7a740e2ab5be4d2930600 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 5.0E-19 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_3028 bd834cd334f7a740e2ab5be4d2930600 335 SUPERFAMILY SSF47413 2 58 9.57E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_3028 bd834cd334f7a740e2ab5be4d2930600 335 Gene3D G3DSA:3.40.50.2300 62 154 1.1E-24 T 15-10-2018 XDD1_3028 bd834cd334f7a740e2ab5be4d2930600 335 Gene3D G3DSA:3.40.50.2300 155 334 1.3E-29 T 15-10-2018 XDD1_3028 bd834cd334f7a740e2ab5be4d2930600 335 SMART SM00354 1 73 6.8E-32 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_3028 bd834cd334f7a740e2ab5be4d2930600 335 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 1.0E-146 T 15-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 XDD1_0197 ba8e7ffec7562e938f242e244d72b3ef 256 SUPERFAMILY SSF110997 183 252 3.27E-19 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XDD1_0197 ba8e7ffec7562e938f242e244d72b3ef 256 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 12 177 1.0E-33 T 15-10-2018 IPR011930 Cell division protein FtsN GO:0005515 XDD1_0197 ba8e7ffec7562e938f242e244d72b3ef 256 Hamap MF_02039 Cell division protein FtsN [ftsN]. 27 256 29.962 T 15-10-2018 IPR011930 Cell division protein FtsN GO:0005515 XDD1_0197 ba8e7ffec7562e938f242e244d72b3ef 256 Pfam PF05036 Sporulation related domain 185 251 3.9E-15 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 XDD1_0197 ba8e7ffec7562e938f242e244d72b3ef 256 Gene3D G3DSA:3.30.70.1070 178 256 9.5E-29 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XDD1_0196 843bd30868926f684c13859f24e98328 176 SUPERFAMILY SSF56235 2 171 6.72E-59 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XDD1_0196 843bd30868926f684c13859f24e98328 176 Gene3D G3DSA:3.60.20.10 1 173 1.5E-69 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XDD1_0196 843bd30868926f684c13859f24e98328 176 Pfam PF00227 Proteasome subunit 2 169 9.6E-24 T 15-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 XDD1_0196 843bd30868926f684c13859f24e98328 176 PIRSF PIRSF039093 1 175 2.3E-88 T 15-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 XDD1_0196 843bd30868926f684c13859f24e98328 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 6.9E-87 T 15-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 XDD1_0196 843bd30868926f684c13859f24e98328 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.054 T 15-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 XDD1_3289 a8adc7e5b7cde09646020bcb3a484219 305 Pfam PF00892 EamA-like transporter family 7 141 7.9E-16 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_3289 a8adc7e5b7cde09646020bcb3a484219 305 Pfam PF00892 EamA-like transporter family 157 284 2.9E-9 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_3289 a8adc7e5b7cde09646020bcb3a484219 305 SUPERFAMILY SSF103481 41 144 1.26E-10 T 15-10-2018 XDD1_3289 a8adc7e5b7cde09646020bcb3a484219 305 SUPERFAMILY SSF103481 188 290 5.49E-8 T 15-10-2018 XDD1_2363 928457c53ad51b745f089a98ce70ea8d 204 SUPERFAMILY SSF52113 7 56 7.85E-5 T 15-10-2018 IPR036420 BRCT domain superfamily XDD1_2363 928457c53ad51b745f089a98ce70ea8d 204 Pfam PF11153 Protein of unknown function (DUF2931) 11 202 5.0E-40 T 15-10-2018 IPR021326 Protein of unknown function DUF2931 XDD1_2547 4be1cfe16c254e749d763d40fb5b5f5c 198 Gene3D G3DSA:1.20.1050.10 85 185 1.0E-13 T 15-10-2018 XDD1_2547 4be1cfe16c254e749d763d40fb5b5f5c 198 SUPERFAMILY SSF47616 73 196 1.34E-18 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily XDD1_2547 4be1cfe16c254e749d763d40fb5b5f5c 198 Pfam PF00043 Glutathione S-transferase, C-terminal domain 130 186 3.5E-5 T 15-10-2018 IPR004046 Glutathione S-transferase, C-terminal XDD1_2547 4be1cfe16c254e749d763d40fb5b5f5c 198 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 75 1.9E-11 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 XDD1_2547 4be1cfe16c254e749d763d40fb5b5f5c 198 Gene3D G3DSA:3.40.30.10 1 84 1.3E-20 T 15-10-2018 XDD1_2547 4be1cfe16c254e749d763d40fb5b5f5c 198 SUPERFAMILY SSF52833 1 79 2.56E-19 T 15-10-2018 IPR036249 Thioredoxin-like superfamily XDD1_0941 f0f32adcb2b79fb101e2e049edc43f2a 461 Pfam PF01554 MatE 19 177 2.4E-18 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XDD1_0941 f0f32adcb2b79fb101e2e049edc43f2a 461 Pfam PF01554 MatE 245 411 1.4E-21 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XDD1_0941 f0f32adcb2b79fb101e2e049edc43f2a 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 423 1.2E-52 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XDD1_1415 17c84cda7b6d94ad63c06a8e0595eb62 329 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 51.797 T 15-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 XDD1_1415 17c84cda7b6d94ad63c06a8e0595eb62 329 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 15-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 XDD1_1415 17c84cda7b6d94ad63c06a8e0595eb62 329 PIRSF PIRSF006621 1 322 8.4E-86 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 XDD1_1415 17c84cda7b6d94ad63c06a8e0595eb62 329 SUPERFAMILY SSF51395 1 311 1.46E-72 T 15-10-2018 XDD1_1415 17c84cda7b6d94ad63c06a8e0595eb62 329 Pfam PF01207 Dihydrouridine synthase (Dus) 5 300 7.8E-90 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 XDD1_1415 17c84cda7b6d94ad63c06a8e0595eb62 329 Gene3D G3DSA:1.20.225.30 243 314 5.3E-31 T 15-10-2018 XDD1_1415 17c84cda7b6d94ad63c06a8e0595eb62 329 Gene3D G3DSA:3.20.20.70 1 242 3.7E-86 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_3137 b7780a5870cf5b5b955eee26ab58621e 170 Hamap MF_00746 Protein SprT [sprT]. 12 165 38.747 T 15-10-2018 IPR023483 Uncharacterised protein family SprT XDD1_3137 b7780a5870cf5b5b955eee26ab58621e 170 Pfam PF17283 SprT-like zinc ribbon domain 127 164 1.6E-8 T 15-10-2018 IPR035240 SprT-like, zinc ribbon domain XDD1_3137 b7780a5870cf5b5b955eee26ab58621e 170 Pfam PF10263 SprT-like family 22 119 2.7E-17 T 15-10-2018 IPR006640 SprT-like XDD1_3137 b7780a5870cf5b5b955eee26ab58621e 170 SMART SM00731 16 165 5.7E-50 T 15-10-2018 IPR006640 SprT-like XDD1_0263 f91b97a43bcd5dac2531a55a52a05845 366 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 9 364 3.4E-191 T 15-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 XDD1_0263 f91b97a43bcd5dac2531a55a52a05845 366 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 298 327 - T 15-10-2018 IPR030390 RNA methyltransferase TrmA, active site XDD1_0263 f91b97a43bcd5dac2531a55a52a05845 366 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 3 365 42.868 T 15-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 XDD1_0263 f91b97a43bcd5dac2531a55a52a05845 366 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 9 364 1.6E-187 T 15-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 XDD1_0263 f91b97a43bcd5dac2531a55a52a05845 366 SUPERFAMILY SSF53335 5 364 3.41E-55 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_0263 f91b97a43bcd5dac2531a55a52a05845 366 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 347 357 - T 15-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site XDD1_0263 f91b97a43bcd5dac2531a55a52a05845 366 Gene3D G3DSA:3.40.1350.30 44 188 2.8E-146 T 15-10-2018 XDD1_0263 f91b97a43bcd5dac2531a55a52a05845 366 Gene3D G3DSA:3.40.50.150 13 361 2.8E-146 T 15-10-2018 XDD1_0759 c0934f9668a066dda5c39cef60a78d65 378 SMART SM00271 4 62 7.5E-32 T 15-10-2018 IPR001623 DnaJ domain XDD1_0759 c0934f9668a066dda5c39cef60a78d65 378 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 15-10-2018 IPR018253 DnaJ domain, conserved site XDD1_0759 c0934f9668a066dda5c39cef60a78d65 378 Pfam PF00684 DnaJ central domain 146 206 2.0E-15 T 15-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 XDD1_0759 c0934f9668a066dda5c39cef60a78d65 378 SUPERFAMILY SSF46565 1 107 1.24E-36 T 15-10-2018 IPR036869 Chaperone J-domain superfamily XDD1_0759 c0934f9668a066dda5c39cef60a78d65 378 Gene3D G3DSA:1.10.287.110 1 113 6.2E-39 T 15-10-2018 IPR036869 Chaperone J-domain superfamily XDD1_0759 c0934f9668a066dda5c39cef60a78d65 378 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 1.6E-143 T 15-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 XDD1_0759 c0934f9668a066dda5c39cef60a78d65 378 Pfam PF00226 DnaJ domain 5 67 9.6E-29 T 15-10-2018 IPR001623 DnaJ domain XDD1_0759 c0934f9668a066dda5c39cef60a78d65 378 SUPERFAMILY SSF57938 133 209 1.44E-23 T 15-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily XDD1_0759 c0934f9668a066dda5c39cef60a78d65 378 SUPERFAMILY SSF49493 258 343 1.44E-22 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 XDD1_0759 c0934f9668a066dda5c39cef60a78d65 378 PRINTS PR00625 DnaJ domain signature 7 25 5.6E-33 T 15-10-2018 IPR001623 DnaJ domain XDD1_0759 c0934f9668a066dda5c39cef60a78d65 378 PRINTS PR00625 DnaJ domain signature 25 40 5.6E-33 T 15-10-2018 IPR001623 DnaJ domain XDD1_0759 c0934f9668a066dda5c39cef60a78d65 378 PRINTS PR00625 DnaJ domain signature 42 62 5.6E-33 T 15-10-2018 IPR001623 DnaJ domain XDD1_0759 c0934f9668a066dda5c39cef60a78d65 378 PRINTS PR00625 DnaJ domain signature 62 81 5.6E-33 T 15-10-2018 IPR001623 DnaJ domain XDD1_0759 c0934f9668a066dda5c39cef60a78d65 378 Gene3D G3DSA:2.10.230.10 146 206 1.7E-39 T 15-10-2018 XDD1_0759 c0934f9668a066dda5c39cef60a78d65 378 Pfam PF01556 DnaJ C terminal domain 120 332 3.5E-45 T 15-10-2018 IPR002939 Chaperone DnaJ, C-terminal XDD1_0759 c0934f9668a066dda5c39cef60a78d65 378 Gene3D G3DSA:2.60.260.20 116 248 1.7E-39 T 15-10-2018 XDD1_0759 c0934f9668a066dda5c39cef60a78d65 378 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 372 42.693 T 15-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 XDD1_0759 c0934f9668a066dda5c39cef60a78d65 378 Gene3D G3DSA:2.60.260.20 254 361 1.6E-28 T 15-10-2018 XDD1_0759 c0934f9668a066dda5c39cef60a78d65 378 SUPERFAMILY SSF49493 112 260 5.49E-20 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 XDD1_3318 29af04689a292bd5e384e3f77ceed066 563 Gene3D G3DSA:1.10.45.10 513 562 1.1E-12 T 15-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 XDD1_3318 29af04689a292bd5e384e3f77ceed066 563 Gene3D G3DSA:3.30.43.10 36 110 4.1E-23 T 15-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 XDD1_3318 29af04689a292bd5e384e3f77ceed066 563 Gene3D G3DSA:3.40.462.10 239 512 8.0E-116 T 15-10-2018 IPR016170 Cytokinin dehydrogenase, C-terminal domain superfamily KEGG: 00908+1.5.99.12 XDD1_3318 29af04689a292bd5e384e3f77ceed066 563 SUPERFAMILY SSF56176 24 235 2.01E-25 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XDD1_3318 29af04689a292bd5e384e3f77ceed066 563 Pfam PF01565 FAD binding domain 56 168 7.6E-10 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 XDD1_3318 29af04689a292bd5e384e3f77ceed066 563 SUPERFAMILY SSF55103 240 562 5.69E-126 T 15-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 XDD1_3318 29af04689a292bd5e384e3f77ceed066 563 Gene3D G3DSA:3.30.465.10 111 238 8.8E-47 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 XDD1_3318 29af04689a292bd5e384e3f77ceed066 563 Pfam PF09129 Cholesterol oxidase, substrate-binding 241 562 6.7E-143 T 15-10-2018 IPR015213 Cholesterol oxidase, substrate-binding XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 4.7E-27 T 15-10-2018 IPR019489 Clp ATPase, C-terminal XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 Gene3D G3DSA:1.10.8.60 766 857 1.2E-26 T 15-10-2018 XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 SUPERFAMILY SSF81923 4 156 2.35E-41 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 15-10-2018 IPR028299 ClpA/B, conserved site 2 XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 2.9E-13 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 6.9E-56 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 SMART SM01086 766 855 9.5E-36 T 15-10-2018 IPR019489 Clp ATPase, C-terminal XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 SUPERFAMILY SSF52540 159 545 3.6E-100 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 SMART SM00382 198 344 1.7E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 SMART SM00382 597 735 6.6E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 Gene3D G3DSA:1.10.1780.10 1 147 1.3E-33 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 Gene3D G3DSA:3.40.50.300 148 342 3.3E-75 T 15-10-2018 XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 Gene3D G3DSA:3.40.50.300 550 764 1.8E-89 T 15-10-2018 XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 SUPERFAMILY SSF52540 546 853 1.21E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 2.7E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 2.7E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 2.7E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 2.7E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 Gene3D G3DSA:3.40.50.300 343 544 3.2E-69 T 15-10-2018 XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 15-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 7.2E-12 T 15-10-2018 IPR004176 Clp, N-terminal XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.9E-11 T 15-10-2018 IPR004176 Clp, N-terminal XDD1_1223 a552b3a2fe43953bc69cc69bc769a611 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 15-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 XDD1_2704 008fa27855a5201656034bb4994e9157 317 SUPERFAMILY SSF53686 3 313 2.75E-97 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XDD1_2704 008fa27855a5201656034bb4994e9157 317 Gene3D G3DSA:3.40.50.1100 12 306 4.1E-124 T 15-10-2018 XDD1_2704 008fa27855a5201656034bb4994e9157 317 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 8.1E-138 T 15-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 XDD1_2704 008fa27855a5201656034bb4994e9157 317 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 15-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 XDD1_2704 008fa27855a5201656034bb4994e9157 317 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 1.4E-145 T 15-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 XDD1_2704 008fa27855a5201656034bb4994e9157 317 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 3.7E-70 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XDD1_2704 008fa27855a5201656034bb4994e9157 317 Gene3D G3DSA:3.40.50.1100 43 145 4.1E-124 T 15-10-2018 XDD1_0728 14c6ae03587fa3d1842b660e9ab1aff2 378 SUPERFAMILY SSF52151 22 296 3.92E-46 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase XDD1_0728 14c6ae03587fa3d1842b660e9ab1aff2 378 Pfam PF01734 Patatin-like phospholipase 28 196 3.1E-17 T 15-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 XDD1_0728 14c6ae03587fa3d1842b660e9ab1aff2 378 Gene3D G3DSA:3.40.1090.10 11 112 2.4E-11 T 15-10-2018 XDD1_0728 14c6ae03587fa3d1842b660e9ab1aff2 378 Gene3D G3DSA:3.40.1090.10 115 257 2.6E-7 T 15-10-2018 XDD1_3870 d3a3db3e242b525851f15ea4aa050c9a 295 Gene3D G3DSA:3.40.190.10 161 263 2.5E-53 T 15-10-2018 XDD1_3870 d3a3db3e242b525851f15ea4aa050c9a 295 Gene3D G3DSA:3.40.190.10 92 290 2.5E-53 T 15-10-2018 XDD1_3870 d3a3db3e242b525851f15ea4aa050c9a 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 2.6E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_3870 d3a3db3e242b525851f15ea4aa050c9a 295 SUPERFAMILY SSF53850 102 292 1.3E-39 T 15-10-2018 XDD1_3870 d3a3db3e242b525851f15ea4aa050c9a 295 SUPERFAMILY SSF46785 3 85 8.88E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3870 d3a3db3e242b525851f15ea4aa050c9a 295 Pfam PF03466 LysR substrate binding domain 91 291 4.9E-39 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_3870 d3a3db3e242b525851f15ea4aa050c9a 295 Gene3D G3DSA:1.10.10.10 3 88 1.8E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2056 92811acc44acfa015d3fb68622e0f851 250 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 202 29.027 T 15-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 XDD1_2056 92811acc44acfa015d3fb68622e0f851 250 Pfam PF03932 CutC family 3 200 4.3E-74 T 15-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 XDD1_2056 92811acc44acfa015d3fb68622e0f851 250 SUPERFAMILY SSF110395 2 244 1.44E-73 T 15-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 XDD1_2056 92811acc44acfa015d3fb68622e0f851 250 Gene3D G3DSA:3.20.20.380 1 250 6.5E-90 T 15-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 XDD1_3645 b0a26af54ce81cd9c2992feeee54448c 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 71 2.0E-14 T 15-10-2018 XDD1_3645 b0a26af54ce81cd9c2992feeee54448c 142 SMART SM00649 9 141 7.8E-83 T 15-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 XDD1_3645 b0a26af54ce81cd9c2992feeee54448c 142 Gene3D G3DSA:3.30.1550.10 2 72 4.4E-34 T 15-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily XDD1_3645 b0a26af54ce81cd9c2992feeee54448c 142 Gene3D G3DSA:1.10.10.250 73 141 3.5E-27 T 15-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily XDD1_3645 b0a26af54ce81cd9c2992feeee54448c 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 15-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_3645 b0a26af54ce81cd9c2992feeee54448c 142 SUPERFAMILY SSF54747 3 73 2.49E-29 T 15-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily XDD1_3645 b0a26af54ce81cd9c2992feeee54448c 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.4E-28 T 15-10-2018 IPR020784 Ribosomal protein L11, N-terminal XDD1_3645 b0a26af54ce81cd9c2992feeee54448c 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 2.2E-24 T 15-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 XDD1_3645 b0a26af54ce81cd9c2992feeee54448c 142 SUPERFAMILY SSF46906 68 141 4.45E-26 T 15-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily XDD1_3645 b0a26af54ce81cd9c2992feeee54448c 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.48 T 15-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 XDD1_3645 b0a26af54ce81cd9c2992feeee54448c 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.7E-64 T 15-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_2599 63dc89ae7580a2c0bc6b4c7984a86b98 193 Pfam PF13023 HD domain 9 161 4.8E-19 T 15-10-2018 IPR006674 HD domain XDD1_2599 63dc89ae7580a2c0bc6b4c7984a86b98 193 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 1 193 45.335 T 15-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 XDD1_2599 63dc89ae7580a2c0bc6b4c7984a86b98 193 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 78 183 3.0E-42 T 15-10-2018 XDD1_2599 63dc89ae7580a2c0bc6b4c7984a86b98 193 SUPERFAMILY SSF109604 1 183 1.48E-46 T 15-10-2018 XDD1_2599 63dc89ae7580a2c0bc6b4c7984a86b98 193 Gene3D G3DSA:1.10.3210.10 1 193 3.0E-87 T 15-10-2018 XDD1_2599 63dc89ae7580a2c0bc6b4c7984a86b98 193 SMART SM00471 24 149 1.2E-8 T 15-10-2018 IPR003607 HD/PDEase domain XDD1_3690 c38a9534c713bfecfed5d007b9a9f673 310 PIRSF PIRSF038992 47 305 1.1E-77 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 XDD1_3690 c38a9534c713bfecfed5d007b9a9f673 310 Gene3D G3DSA:3.20.20.70 14 307 4.6E-99 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_3690 c38a9534c713bfecfed5d007b9a9f673 310 SMART SM01133 67 275 9.2E-28 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 XDD1_3690 c38a9534c713bfecfed5d007b9a9f673 310 Pfam PF01791 DeoC/LacD family aldolase 68 274 1.1E-16 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 XDD1_3690 c38a9534c713bfecfed5d007b9a9f673 310 SUPERFAMILY SSF51569 51 291 2.97E-62 T 15-10-2018 XDD1_3690 c38a9534c713bfecfed5d007b9a9f673 310 Hamap MF_02052 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [lsrF]. 17 307 75.246 T 15-10-2018 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase GO:0016747 XDD1_2197 046ff032a28e2151e7716500cd088d7a 107 SUPERFAMILY SSF55159 12 103 5.36E-25 T 15-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 XDD1_2197 046ff032a28e2151e7716500cd088d7a 107 Pfam PF01253 Translation initiation factor SUI1 31 100 2.7E-18 T 15-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 XDD1_2197 046ff032a28e2151e7716500cd088d7a 107 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 7 107 2.1E-37 T 15-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 XDD1_2197 046ff032a28e2151e7716500cd088d7a 107 PIRSF PIRSF037511 1 107 1.7E-33 T 15-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 XDD1_2197 046ff032a28e2151e7716500cd088d7a 107 Gene3D G3DSA:3.30.780.10 27 107 3.1E-33 T 15-10-2018 XDD1_0875 88218dd2b2f99e700d79616664b12fbf 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 230 5.6E-15 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain XDD1_0875 88218dd2b2f99e700d79616664b12fbf 434 SUPERFAMILY SSF54534 90 241 3.14E-38 T 15-10-2018 XDD1_0875 88218dd2b2f99e700d79616664b12fbf 434 Hamap MF_00303 Trigger factor [tig]. 1 418 22.444 T 15-10-2018 IPR005215 Trigger factor GO:0015031 XDD1_0875 88218dd2b2f99e700d79616664b12fbf 434 SUPERFAMILY SSF109998 248 429 1.77E-47 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily XDD1_0875 88218dd2b2f99e700d79616664b12fbf 434 PIRSF PIRSF003095 1 433 2.8E-133 T 15-10-2018 IPR005215 Trigger factor GO:0015031 XDD1_0875 88218dd2b2f99e700d79616664b12fbf 434 Gene3D G3DSA:1.10.3120.10 116 417 2.6E-111 T 15-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 XDD1_0875 88218dd2b2f99e700d79616664b12fbf 434 TIGRFAM TIGR00115 tig: trigger factor 13 412 5.4E-144 T 15-10-2018 IPR005215 Trigger factor GO:0015031 XDD1_0875 88218dd2b2f99e700d79616664b12fbf 434 SUPERFAMILY SSF102735 1 131 1.27E-41 T 15-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 XDD1_0875 88218dd2b2f99e700d79616664b12fbf 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 3.9E-39 T 15-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 XDD1_0875 88218dd2b2f99e700d79616664b12fbf 434 Gene3D G3DSA:3.10.50.40 150 246 2.6E-111 T 15-10-2018 XDD1_0875 88218dd2b2f99e700d79616664b12fbf 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 5.5E-44 T 15-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 XDD1_0875 88218dd2b2f99e700d79616664b12fbf 434 Gene3D G3DSA:3.30.70.1050 1 115 5.3E-44 T 15-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 XDD1_1857 161ca8a112368796adfd6cfdc9ae543e 341 Gene3D G3DSA:3.40.50.2300 69 323 1.4E-100 T 15-10-2018 XDD1_1857 161ca8a112368796adfd6cfdc9ae543e 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.2E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_1857 161ca8a112368796adfd6cfdc9ae543e 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.2E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_1857 161ca8a112368796adfd6cfdc9ae543e 341 Gene3D G3DSA:3.40.50.2300 162 324 1.4E-100 T 15-10-2018 XDD1_1857 161ca8a112368796adfd6cfdc9ae543e 341 SUPERFAMILY SSF53822 60 337 2.55E-95 T 15-10-2018 IPR028082 Periplasmic binding protein-like I XDD1_1857 161ca8a112368796adfd6cfdc9ae543e 341 Gene3D G3DSA:1.10.260.40 3 59 1.1E-25 T 15-10-2018 XDD1_1857 161ca8a112368796adfd6cfdc9ae543e 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 3.1E-39 T 15-10-2018 XDD1_1857 161ca8a112368796adfd6cfdc9ae543e 341 SUPERFAMILY SSF47413 1 59 5.63E-17 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_1857 161ca8a112368796adfd6cfdc9ae543e 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 15-10-2018 XDD1_1857 161ca8a112368796adfd6cfdc9ae543e 341 SMART SM00354 1 71 1.4E-36 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_1857 161ca8a112368796adfd6cfdc9ae543e 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 5.1E-19 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_1857 161ca8a112368796adfd6cfdc9ae543e 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 61.859 T 15-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 XDD1_3333 21be7b408729daed1e06695c2c3b6f1b 283 Gene3D G3DSA:3.40.50.150 78 273 1.6E-34 T 15-10-2018 XDD1_3333 21be7b408729daed1e06695c2c3b6f1b 283 Pfam PF05175 Methyltransferase small domain 93 189 1.6E-10 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 XDD1_3333 21be7b408729daed1e06695c2c3b6f1b 283 SUPERFAMILY SSF53335 30 266 5.49E-33 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_3333 21be7b408729daed1e06695c2c3b6f1b 283 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 182 188 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XDD1_3333 21be7b408729daed1e06695c2c3b6f1b 283 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 40 262 5.3E-34 T 15-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 XDD1_1249 4d922a87cf002509031936f1c013ab9e 171 SMART SM00347 46 148 8.1E-27 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_1249 4d922a87cf002509031936f1c013ab9e 171 Pfam PF01047 MarR family 53 112 2.2E-14 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_1249 4d922a87cf002509031936f1c013ab9e 171 SUPERFAMILY SSF46785 23 165 1.72E-27 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1249 4d922a87cf002509031936f1c013ab9e 171 Gene3D G3DSA:1.10.10.10 12 163 3.8E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1249 4d922a87cf002509031936f1c013ab9e 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 3.7E-22 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_1249 4d922a87cf002509031936f1c013ab9e 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 3.7E-22 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_1249 4d922a87cf002509031936f1c013ab9e 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 3.7E-22 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_1249 4d922a87cf002509031936f1c013ab9e 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 3.7E-22 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_1249 4d922a87cf002509031936f1c013ab9e 171 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 15-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site XDD1_3904 4c2ea3f9816416799fa8d275419a536b 302 Gene3D G3DSA:3.40.190.10 92 302 1.0E-66 T 15-10-2018 XDD1_3904 4c2ea3f9816416799fa8d275419a536b 302 Pfam PF14502 Helix-turn-helix domain 25 72 5.9E-24 T 15-10-2018 XDD1_3904 4c2ea3f9816416799fa8d275419a536b 302 SUPERFAMILY SSF53850 75 302 4.48E-82 T 15-10-2018 XDD1_3904 4c2ea3f9816416799fa8d275419a536b 302 Gene3D G3DSA:3.40.190.10 168 259 1.0E-66 T 15-10-2018 XDD1_3904 4c2ea3f9816416799fa8d275419a536b 302 Pfam PF14503 YhfZ C-terminal domain 76 302 3.4E-84 T 15-10-2018 IPR032791 Uncharacterised protein YhfZ, C-terminal domain XDD1_1689 3389416d71bc2982015f18eb576fff41 405 Pfam PF04860 Phage portal protein 43 377 1.4E-88 T 15-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein XDD1_1689 3389416d71bc2982015f18eb576fff41 405 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 35 383 1.4E-74 T 15-10-2018 IPR006427 Phage portal protein, HK97 XDD1_2562 60ce4091bc4555c5a798321b70595f8a 914 Pfam PF16359 RcsD-ABL domain 677 782 3.0E-31 T 15-10-2018 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain XDD1_2562 60ce4091bc4555c5a798321b70595f8a 914 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 607 5.4E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2562 60ce4091bc4555c5a798321b70595f8a 914 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 645 5.4E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2562 60ce4091bc4555c5a798321b70595f8a 914 PRINTS PR00344 Bacterial sensor protein C-terminal signature 651 664 5.4E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2562 60ce4091bc4555c5a798321b70595f8a 914 SUPERFAMILY SSF47226 827 908 6.28E-15 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 XDD1_2562 60ce4091bc4555c5a798321b70595f8a 914 Pfam PF01627 Hpt domain 829 893 7.5E-10 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XDD1_2562 60ce4091bc4555c5a798321b70595f8a 914 Gene3D G3DSA:1.10.287.130 446 504 5.0E-21 T 15-10-2018 XDD1_2562 60ce4091bc4555c5a798321b70595f8a 914 Gene3D G3DSA:3.30.565.10 505 664 5.0E-21 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_2562 60ce4091bc4555c5a798321b70595f8a 914 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 8 909 23.435 T 15-10-2018 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 XDD1_2562 60ce4091bc4555c5a798321b70595f8a 914 SUPERFAMILY SSF47384 428 507 3.73E-5 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XDD1_2562 60ce4091bc4555c5a798321b70595f8a 914 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 554 666 5.8E-10 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_2562 60ce4091bc4555c5a798321b70595f8a 914 Gene3D G3DSA:3.40.50.11620 675 794 7.4E-25 T 15-10-2018 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily XDD1_2562 60ce4091bc4555c5a798321b70595f8a 914 SUPERFAMILY SSF55874 497 669 2.26E-18 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_2562 60ce4091bc4555c5a798321b70595f8a 914 SMART SM00387 554 667 1.3E-5 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_2562 60ce4091bc4555c5a798321b70595f8a 914 Gene3D G3DSA:1.20.120.160 805 914 3.4E-9 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 XDD1_0780 78ac8c7b2cc6dddbf9a6ab69da6189c8 829 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 470 7.7E-140 T 15-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XDD1_0780 78ac8c7b2cc6dddbf9a6ab69da6189c8 829 Pfam PF13840 ACT domain 325 385 2.6E-9 T 15-10-2018 IPR027795 CASTOR, ACT domain XDD1_0780 78ac8c7b2cc6dddbf9a6ab69da6189c8 829 Pfam PF13840 ACT domain 403 464 5.7E-7 T 15-10-2018 IPR027795 CASTOR, ACT domain XDD1_0780 78ac8c7b2cc6dddbf9a6ab69da6189c8 829 Gene3D G3DSA:1.20.120.1320 41 142 2.0E-82 T 15-10-2018 XDD1_0780 78ac8c7b2cc6dddbf9a6ab69da6189c8 829 Gene3D G3DSA:3.30.2130.10 312 473 4.9E-49 T 15-10-2018 XDD1_0780 78ac8c7b2cc6dddbf9a6ab69da6189c8 829 Pfam PF00742 Homoserine dehydrogenase 624 820 7.0E-47 T 15-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 XDD1_0780 78ac8c7b2cc6dddbf9a6ab69da6189c8 829 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 15-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XDD1_0780 78ac8c7b2cc6dddbf9a6ab69da6189c8 829 SUPERFAMILY SSF55347 624 807 1.18E-50 T 15-10-2018 XDD1_0780 78ac8c7b2cc6dddbf9a6ab69da6189c8 829 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 482 615 4.7E-28 T 15-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 XDD1_0780 78ac8c7b2cc6dddbf9a6ab69da6189c8 829 Gene3D G3DSA:3.30.360.10 635 805 4.5E-118 T 15-10-2018 XDD1_0780 78ac8c7b2cc6dddbf9a6ab69da6189c8 829 Pfam PF00696 Amino acid kinase family 2 284 1.9E-44 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XDD1_0780 78ac8c7b2cc6dddbf9a6ab69da6189c8 829 Gene3D G3DSA:3.40.1160.10 3 295 2.0E-82 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XDD1_0780 78ac8c7b2cc6dddbf9a6ab69da6189c8 829 SUPERFAMILY SSF53633 1 296 9.73E-71 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XDD1_0780 78ac8c7b2cc6dddbf9a6ab69da6189c8 829 SUPERFAMILY SSF51735 474 646 9.33E-38 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0780 78ac8c7b2cc6dddbf9a6ab69da6189c8 829 SUPERFAMILY SSF55021 313 391 9.16E-23 T 15-10-2018 XDD1_0780 78ac8c7b2cc6dddbf9a6ab69da6189c8 829 Gene3D G3DSA:3.40.50.720 476 821 4.5E-118 T 15-10-2018 XDD1_0780 78ac8c7b2cc6dddbf9a6ab69da6189c8 829 SUPERFAMILY SSF55021 393 486 4.58E-23 T 15-10-2018 XDD1_0780 78ac8c7b2cc6dddbf9a6ab69da6189c8 829 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 670 692 - T 15-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 XDD1_0780 78ac8c7b2cc6dddbf9a6ab69da6189c8 829 PIRSF PIRSF000727 1 827 0.0 T 15-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XDD1_0633 94e1427817f1d8fe9201cf5a32ff1852 164 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 3.9E-35 T 15-10-2018 IPR005134 Uncharacterised protein family UPF0114 XDD1_0633 94e1427817f1d8fe9201cf5a32ff1852 164 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 163 2.9E-74 T 15-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria XDD1_0633 94e1427817f1d8fe9201cf5a32ff1852 164 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 164 90.251 T 15-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria XDD1_1194 93219d2f5325b7863b51d1b169fbd80c 176 SUPERFAMILY SSF52540 2 168 2.34E-27 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1194 93219d2f5325b7863b51d1b169fbd80c 176 Pfam PF01202 Shikimate kinase 11 165 8.5E-47 T 15-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 XDD1_1194 93219d2f5325b7863b51d1b169fbd80c 176 PRINTS PR01100 Shikimate kinase family signature 57 65 4.4E-24 T 15-10-2018 XDD1_1194 93219d2f5325b7863b51d1b169fbd80c 176 PRINTS PR01100 Shikimate kinase family signature 5 20 4.4E-24 T 15-10-2018 XDD1_1194 93219d2f5325b7863b51d1b169fbd80c 176 PRINTS PR01100 Shikimate kinase family signature 29 42 4.4E-24 T 15-10-2018 XDD1_1194 93219d2f5325b7863b51d1b169fbd80c 176 PRINTS PR01100 Shikimate kinase family signature 74 83 4.4E-24 T 15-10-2018 XDD1_1194 93219d2f5325b7863b51d1b169fbd80c 176 PRINTS PR01100 Shikimate kinase family signature 95 112 4.4E-24 T 15-10-2018 XDD1_1194 93219d2f5325b7863b51d1b169fbd80c 176 Gene3D G3DSA:3.40.50.300 1 168 1.0E-52 T 15-10-2018 XDD1_1194 93219d2f5325b7863b51d1b169fbd80c 176 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 15-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 XDD1_1194 93219d2f5325b7863b51d1b169fbd80c 176 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 25.75 T 15-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 XDD1_3665 29af5e6c4ba49399bd11a188c200daf6 72 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 7.8E-34 T 15-10-2018 IPR010648 Uncharacterised protein family UPF0270 XDD1_3665 29af5e6c4ba49399bd11a188c200daf6 72 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 67 8.0E-27 T 15-10-2018 IPR010648 Uncharacterised protein family UPF0270 XDD1_3665 29af5e6c4ba49399bd11a188c200daf6 72 SUPERFAMILY SSF118001 1 70 3.27E-28 T 15-10-2018 IPR036685 YehU-like superfamily XDD1_3665 29af5e6c4ba49399bd11a188c200daf6 72 Gene3D G3DSA:1.10.10.610 1 72 1.9E-29 T 15-10-2018 IPR036685 YehU-like superfamily XDD1_3665 29af5e6c4ba49399bd11a188c200daf6 72 PIRSF PIRSF006169 1 72 2.7E-36 T 15-10-2018 IPR010648 Uncharacterised protein family UPF0270 XDD1_3665 29af5e6c4ba49399bd11a188c200daf6 72 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.277 T 15-10-2018 IPR010648 Uncharacterised protein family UPF0270 XDD1_1338 62f88d112705147eeef898ba94883b4c 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 126 1.8E-36 T 15-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_1338 62f88d112705147eeef898ba94883b4c 129 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 84 97 - T 15-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_1338 62f88d112705147eeef898ba94883b4c 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 123 7.2E-27 T 15-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_1338 62f88d112705147eeef898ba94883b4c 129 Gene3D G3DSA:1.20.1300.10 2 129 3.4E-42 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_1338 62f88d112705147eeef898ba94883b4c 129 SUPERFAMILY SSF81343 4 129 9.81E-32 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_1338 62f88d112705147eeef898ba94883b4c 129 PIRSF PIRSF000178 2 129 7.0E-28 T 15-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_1338 62f88d112705147eeef898ba94883b4c 129 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 9 33 - T 15-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_1777 39fef008d6cb28058b450aede2705c67 795 SMART SM00896 701 794 7.8E-42 T 15-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 XDD1_1777 39fef008d6cb28058b450aede2705c67 795 SUPERFAMILY SSF56037 196 393 2.62E-74 T 15-10-2018 XDD1_1777 39fef008d6cb28058b450aede2705c67 795 Gene3D G3DSA:3.30.56.10 7 180 1.1E-72 T 15-10-2018 XDD1_1777 39fef008d6cb28058b450aede2705c67 795 SUPERFAMILY SSF55681 467 689 8.45E-57 T 15-10-2018 XDD1_1777 39fef008d6cb28058b450aede2705c67 795 Gene3D G3DSA:3.30.930.10 485 693 9.3E-67 T 15-10-2018 XDD1_1777 39fef008d6cb28058b450aede2705c67 795 SUPERFAMILY SSF50249 35 196 3.18E-49 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_1777 39fef008d6cb28058b450aede2705c67 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 2.0E-19 T 15-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 XDD1_1777 39fef008d6cb28058b450aede2705c67 795 Gene3D G3DSA:2.40.50.140 39 154 1.1E-72 T 15-10-2018 XDD1_1777 39fef008d6cb28058b450aede2705c67 795 Gene3D G3DSA:3.30.70.380 702 795 3.0E-29 T 15-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 XDD1_1777 39fef008d6cb28058b450aede2705c67 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 47.544 T 15-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 XDD1_1777 39fef008d6cb28058b450aede2705c67 795 Pfam PF03483 B3/4 domain 212 385 3.8E-68 T 15-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 XDD1_1777 39fef008d6cb28058b450aede2705c67 795 Pfam PF01588 Putative tRNA binding domain 46 145 9.2E-27 T 15-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 XDD1_1777 39fef008d6cb28058b450aede2705c67 795 Gene3D G3DSA:3.30.56.10 401 475 1.2E-27 T 15-10-2018 XDD1_1777 39fef008d6cb28058b450aede2705c67 795 SMART SM00874 403 471 1.7E-31 T 15-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 XDD1_1777 39fef008d6cb28058b450aede2705c67 795 SUPERFAMILY SSF46955 403 475 2.2E-21 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily XDD1_1777 39fef008d6cb28058b450aede2705c67 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 3.2E-287 T 15-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 XDD1_1777 39fef008d6cb28058b450aede2705c67 795 SUPERFAMILY SSF54991 696 794 1.44E-29 T 15-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 XDD1_1777 39fef008d6cb28058b450aede2705c67 795 SMART SM00873 212 385 1.3E-91 T 15-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 XDD1_1777 39fef008d6cb28058b450aede2705c67 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.1E-26 T 15-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 XDD1_1777 39fef008d6cb28058b450aede2705c67 795 Gene3D G3DSA:3.50.40.10 198 395 1.3E-79 T 15-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 XDD1_2952 6d49c69297a4db3f80c18b7878b7432c 310 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 190 206 - T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 XDD1_2952 6d49c69297a4db3f80c18b7878b7432c 310 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 308 1.4E-158 T 15-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 XDD1_2952 6d49c69297a4db3f80c18b7878b7432c 310 Pfam PF00472 RF-1 domain 173 282 1.5E-41 T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 XDD1_2952 6d49c69297a4db3f80c18b7878b7432c 310 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 310 33.997 T 15-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 XDD1_2952 6d49c69297a4db3f80c18b7878b7432c 310 Gene3D G3DSA:3.30.160.20 171 266 2.5E-98 T 15-10-2018 XDD1_2952 6d49c69297a4db3f80c18b7878b7432c 310 Gene3D G3DSA:3.30.70.1660 75 303 2.5E-98 T 15-10-2018 XDD1_2952 6d49c69297a4db3f80c18b7878b7432c 310 Gene3D G3DSA:1.20.58.410 1 61 4.1E-16 T 15-10-2018 XDD1_2952 6d49c69297a4db3f80c18b7878b7432c 310 SMART SM00937 30 140 2.8E-58 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 XDD1_2952 6d49c69297a4db3f80c18b7878b7432c 310 Pfam PF03462 PCRF domain 2 164 3.8E-53 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 XDD1_2952 6d49c69297a4db3f80c18b7878b7432c 310 SUPERFAMILY SSF75620 1 309 1.18E-136 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.559.10 3272 3651 2.0E-153 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF47336 5355 5428 2.62E-19 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.559.10 41 236 1.3E-45 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF52777 1312 1576 4.45E-66 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 662 673 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF52777 4561 4833 1.33E-45 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.559.10 5449 5827 1.1E-153 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF52777 41 213 1.1E-33 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1062 1077 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF56801 6972 7538 2.62E-169 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF56801 3703 4272 3.01E-164 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:1.10.1200.10 5352 5435 4.2E-26 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:1.10.1200.10 1025 1110 2.4E-25 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:1.10.1200.10 4248 4329 3.7E-21 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF56801 5880 6455 5.1E-173 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:1.10.1200.10 3176 3254 6.4E-24 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:1.10.1200.10 6431 6513 5.4E-21 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:1.10.1200.10 2084 2163 2.3E-20 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.559.10 6562 6923 3.5E-85 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.559.30 2398 2660 2.2E-46 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.559.30 4565 4832 2.7E-49 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF52777 5443 5649 5.67E-50 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF52777 1118 1324 2.78E-51 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.300.30 922 1024 5.8E-37 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.300.30 7409 7515 4.0E-36 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.300.30 6327 6430 3.3E-37 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.300.30 4143 4247 9.3E-36 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.300.30 3070 3175 1.6E-36 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF47336 4252 4323 1.31E-15 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.300.30 5248 5351 2.6E-36 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.300.30 1980 2083 3.8E-36 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF47336 2087 2159 1.07E-14 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.559.10 1124 1498 2.3E-158 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.559.30 5633 5880 1.1E-153 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.559.30 1308 1553 2.3E-158 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF52777 2397 2661 4.0E-43 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF13193 AMP-binding enzyme C-terminal domain 936 1011 6.4E-12 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF13193 AMP-binding enzyme C-terminal domain 6340 6415 5.4E-13 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF13193 AMP-binding enzyme C-terminal domain 3084 3159 1.5E-11 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF13193 AMP-binding enzyme C-terminal domain 5261 5336 8.8E-13 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF13193 AMP-binding enzyme C-terminal domain 7423 7498 1.4E-11 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF13193 AMP-binding enzyme C-terminal domain 4157 4232 8.6E-12 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF13193 AMP-binding enzyme C-terminal domain 1993 2068 1.7E-13 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.40.50.1820 7516 7621 5.9E-22 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.559.10 2205 2397 6.6E-38 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.559.10 4369 4564 3.0E-38 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF52777 218 499 1.11E-30 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00550 Phosphopantetheine attachment site 6445 6506 1.0E-7 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00550 Phosphopantetheine attachment site 7527 7589 6.0E-12 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00550 Phosphopantetheine attachment site 2097 2159 9.8E-7 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00550 Phosphopantetheine attachment site 3189 3250 9.5E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00550 Phosphopantetheine attachment site 1040 1102 1.5E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00550 Phosphopantetheine attachment site 5366 5426 1.0E-12 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00550 Phosphopantetheine attachment site 4262 4323 1.3E-9 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1735 1746 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.40.50.12780 4836 5245 8.9E-149 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.40.50.12780 3732 4141 3.3E-143 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.40.50.12780 1579 1977 6.0E-135 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.40.50.12780 7003 7407 1.7E-152 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.40.50.12780 503 920 1.2E-140 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.40.50.12780 2664 3068 8.2E-150 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.559.30 245 485 3.3E-29 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 5939 6356 3.0E-143 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 534 952 1.0E-135 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3763 4173 1.1E-138 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 7034 7439 1.9E-141 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4867 5277 1.6E-137 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2695 3100 2.3E-139 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1610 2009 2.4E-135 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF52777 6555 6749 1.67E-31 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 6071 6082 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.559.30 6735 6989 3.5E-85 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 ProSitePatterns PS00012 Phosphopantetheine attachment site. 5387 5402 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2818 2829 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF56801 2632 3199 1.57E-168 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF52777 2208 2407 9.56E-32 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF52777 6736 6999 1.03E-43 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3890 3901 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF52777 4371 4571 2.22E-32 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF56801 1549 2108 1.28E-162 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF52777 3465 3728 7.89E-63 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF47336 7518 7590 4.32E-17 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00668 Condensation domain 2210 2654 6.1E-50 T 15-10-2018 IPR001242 Condensation domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00668 Condensation domain 1123 1569 1.8E-110 T 15-10-2018 IPR001242 Condensation domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00668 Condensation domain 4373 4826 4.2E-51 T 15-10-2018 IPR001242 Condensation domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00668 Condensation domain 5448 5898 2.6E-108 T 15-10-2018 IPR001242 Condensation domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00668 Condensation domain 3271 3722 3.8E-104 T 15-10-2018 IPR001242 Condensation domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00668 Condensation domain 37 493 8.3E-70 T 15-10-2018 IPR001242 Condensation domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00668 Condensation domain 6556 6993 2.2E-50 T 15-10-2018 IPR001242 Condensation domain XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00501 AMP-binding enzyme 7013 7415 9.5E-109 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00501 AMP-binding enzyme 2674 3076 2.7E-106 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00501 AMP-binding enzyme 513 928 1.7E-101 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00501 AMP-binding enzyme 1589 1985 9.9E-100 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00501 AMP-binding enzyme 4847 5253 1.3E-103 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00501 AMP-binding enzyme 5918 6332 1.4E-110 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Pfam PF00501 AMP-binding enzyme 3743 4149 5.1E-105 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.40.50.12780 5904 6326 1.8E-152 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF47336 6434 6507 5.37E-15 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 4994 5005 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF52777 3266 3477 1.45E-49 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF47336 3178 3251 4.71E-18 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF56801 474 1051 1.83E-160 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 Gene3D G3DSA:3.30.559.30 3461 3707 2.0E-153 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 7157 7168 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SMART SM00823 Phosphopantetheine attachment site 7525 7594 0.0064 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SMART SM00823 Phosphopantetheine attachment site 4259 4327 0.47 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SMART SM00823 Phosphopantetheine attachment site 5363 5432 8.7E-4 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SMART SM00823 Phosphopantetheine attachment site 1038 1107 0.0014 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SMART SM00823 Phosphopantetheine attachment site 6442 6510 0.14 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SMART SM00823 Phosphopantetheine attachment site 3186 3255 0.029 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF47336 1030 1104 1.31E-18 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF56801 4804 5376 5.49E-163 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 SUPERFAMILY SSF52777 5637 5903 3.78E-62 T 15-10-2018 XDD1_2281 5eb2bc07d8dcc8ada3cf8930f325ec96 7632 ProSitePatterns PS00012 Phosphopantetheine attachment site. 7549 7564 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_0654 d60413059db469e815df1e3f1cdc5872 316 Gene3D G3DSA:3.90.245.10 2 315 1.1E-123 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like XDD1_0654 d60413059db469e815df1e3f1cdc5872 316 SUPERFAMILY SSF53590 3 310 4.71E-105 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like XDD1_0654 d60413059db469e815df1e3f1cdc5872 316 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 302 1.4E-93 T 15-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain XDD1_0654 d60413059db469e815df1e3f1cdc5872 316 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 9 19 - T 15-10-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 XDD1_0833 963a8d6cca55d79e2a543a72c68f37a8 374 SUPERFAMILY SSF51713 2 364 8.89E-166 T 15-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XDD1_0833 963a8d6cca55d79e2a543a72c68f37a8 374 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 2.0E-94 T 15-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XDD1_0833 963a8d6cca55d79e2a543a72c68f37a8 374 Gene3D G3DSA:3.20.20.105 1 367 2.2E-172 T 15-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XDD1_0833 963a8d6cca55d79e2a543a72c68f37a8 374 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 7.5E-191 T 15-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XDD1_0833 963a8d6cca55d79e2a543a72c68f37a8 374 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 367 3.0E-181 T 15-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XDD1_0833 963a8d6cca55d79e2a543a72c68f37a8 374 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 364 57.66 T 15-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 SMART SM01086 652 741 2.2E-32 T 15-10-2018 IPR019489 Clp ATPase, C-terminal XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 15-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 733 0.0 T 15-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 SMART SM00382 486 653 1.9E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 SMART SM00382 205 350 3.6E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 SUPERFAMILY SSF52540 436 749 1.35E-76 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 341 1.1E-12 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 1.7E-36 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 1.7E-36 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 1.7E-36 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 1.7E-36 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 Gene3D G3DSA:1.10.8.60 355 437 2.8E-34 T 15-10-2018 XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 Pfam PF07724 AAA domain (Cdc48 subfamily) 485 644 1.1E-48 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 SUPERFAMILY SSF81923 1 140 1.44E-56 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.4E-13 T 15-10-2018 IPR004176 Clp, N-terminal XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 Gene3D G3DSA:1.10.8.60 652 757 8.7E-33 T 15-10-2018 XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 Gene3D G3DSA:1.10.1780.10 1 142 6.7E-42 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 Gene3D G3DSA:3.40.50.300 438 651 2.9E-78 T 15-10-2018 XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 Gene3D G3DSA:3.40.50.300 165 354 1.1E-62 T 15-10-2018 XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 652 732 7.5E-24 T 15-10-2018 IPR019489 Clp ATPase, C-terminal XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 SUPERFAMILY SSF52540 167 424 3.42E-67 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1550 74d2951dd096cdf7b9215da59b7b8a1a 761 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 15-10-2018 IPR028299 ClpA/B, conserved site 2 XDD1_2080 1ecf257ed05e2737f2b6487253ab0dce 114 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 15-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 XDD1_2080 1ecf257ed05e2737f2b6487253ab0dce 114 Gene3D G3DSA:3.30.1330.40 1 114 2.3E-35 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XDD1_2080 1ecf257ed05e2737f2b6487253ab0dce 114 SUPERFAMILY SSF55298 1 113 4.87E-28 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XDD1_2080 1ecf257ed05e2737f2b6487253ab0dce 114 Pfam PF01042 Endoribonuclease L-PSP 3 113 9.7E-26 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 XDD1_0469 b43d0a53da8a81db666423e2af0c83a8 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.737 T 15-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 XDD1_0469 b43d0a53da8a81db666423e2af0c83a8 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 1.3E-60 T 15-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 XDD1_0469 b43d0a53da8a81db666423e2af0c83a8 158 PIRSF PIRSF006092 1 158 1.1E-55 T 15-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 XDD1_0469 b43d0a53da8a81db666423e2af0c83a8 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 7.2E-29 T 15-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 XDD1_0469 b43d0a53da8a81db666423e2af0c83a8 158 Gene3D G3DSA:3.10.50.30 76 158 1.4E-31 T 15-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 XDD1_0469 b43d0a53da8a81db666423e2af0c83a8 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 15-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 XDD1_0469 b43d0a53da8a81db666423e2af0c83a8 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 15-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 XDD1_0469 b43d0a53da8a81db666423e2af0c83a8 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 1.1E-32 T 15-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 XDD1_0469 b43d0a53da8a81db666423e2af0c83a8 158 SUPERFAMILY SSF46557 3 78 1.23E-29 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 XDD1_0469 b43d0a53da8a81db666423e2af0c83a8 158 Gene3D G3DSA:1.10.287.180 1 75 7.8E-34 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 XDD1_0469 b43d0a53da8a81db666423e2af0c83a8 158 SUPERFAMILY SSF54534 81 157 1.96E-24 T 15-10-2018 XDD1_2769 62a8692a7f5ac86a3595f5dc3491233d 425 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 7 412 2.0E-158 T 15-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 XDD1_2769 62a8692a7f5ac86a3595f5dc3491233d 425 Gene3D G3DSA:3.40.50.800 328 424 5.9E-24 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily XDD1_2769 62a8692a7f5ac86a3595f5dc3491233d 425 SUPERFAMILY SSF52954 330 424 1.05E-21 T 15-10-2018 XDD1_2769 62a8692a7f5ac86a3595f5dc3491233d 425 Pfam PF03129 Anticodon binding domain 345 422 3.5E-9 T 15-10-2018 IPR004154 Anticodon-binding XDD1_2769 62a8692a7f5ac86a3595f5dc3491233d 425 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 422 33.394 T 15-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 XDD1_2769 62a8692a7f5ac86a3595f5dc3491233d 425 Pfam PF13393 Histidyl-tRNA synthetase 10 311 1.4E-44 T 15-10-2018 XDD1_2769 62a8692a7f5ac86a3595f5dc3491233d 425 SUPERFAMILY SSF55681 5 320 2.87E-106 T 15-10-2018 XDD1_2769 62a8692a7f5ac86a3595f5dc3491233d 425 Gene3D G3DSA:3.30.930.10 3 322 4.1E-119 T 15-10-2018 XDD1_2769 62a8692a7f5ac86a3595f5dc3491233d 425 PIRSF PIRSF001549 2 424 2.2E-126 T 15-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 XDD1_1846 84b2aaf830f6bb70fd5ff8a5bf090ad2 137 Pfam PF03061 Thioesterase superfamily 50 127 1.4E-16 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 XDD1_1846 84b2aaf830f6bb70fd5ff8a5bf090ad2 137 Gene3D G3DSA:3.10.129.10 1 137 3.0E-59 T 15-10-2018 XDD1_1846 84b2aaf830f6bb70fd5ff8a5bf090ad2 137 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 4.3E-44 T 15-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 XDD1_1846 84b2aaf830f6bb70fd5ff8a5bf090ad2 137 SUPERFAMILY SSF54637 4 136 2.19E-30 T 15-10-2018 IPR029069 HotDog domain superfamily XDD1_3891 5b43400e7f325430c98c5f1af2b35c49 227 SUPERFAMILY SSF53271 50 225 2.36E-32 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like XDD1_3891 5b43400e7f325430c98c5f1af2b35c49 227 Pfam PF00156 Phosphoribosyl transferase domain 153 224 4.8E-7 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 XDD1_3891 5b43400e7f325430c98c5f1af2b35c49 227 Gene3D G3DSA:3.40.50.2020 103 226 1.9E-15 T 15-10-2018 XDD1_1675 d3cb70b13c1392c3c883ab21ad149d9a 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 388 542 1.5E-45 T 15-10-2018 IPR001162 UvrC family homology region XDD1_1675 d3cb70b13c1392c3c883ab21ad149d9a 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 8 589 1.6E-229 T 15-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 XDD1_1675 d3cb70b13c1392c3c883ab21ad149d9a 610 SMART SM00465 17 98 1.5E-22 T 15-10-2018 IPR000305 GIY-YIG endonuclease XDD1_1675 d3cb70b13c1392c3c883ab21ad149d9a 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 29.897 T 15-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 XDD1_1675 d3cb70b13c1392c3c883ab21ad149d9a 610 Gene3D G3DSA:4.10.860.10 201 241 7.9E-6 T 15-10-2018 XDD1_1675 d3cb70b13c1392c3c883ab21ad149d9a 610 Pfam PF02151 UvrB/uvrC motif 205 238 1.9E-9 T 15-10-2018 IPR001943 UVR domain GO:0005515 XDD1_1675 d3cb70b13c1392c3c883ab21ad149d9a 610 Gene3D G3DSA:1.10.150.20 555 610 3.4E-24 T 15-10-2018 XDD1_1675 d3cb70b13c1392c3c883ab21ad149d9a 610 SUPERFAMILY SSF46600 190 243 9.68E-14 T 15-10-2018 IPR036876 UVR domain superfamily XDD1_1675 d3cb70b13c1392c3c883ab21ad149d9a 610 SUPERFAMILY SSF47781 512 609 1.24E-18 T 15-10-2018 IPR010994 RuvA domain 2-like XDD1_1675 d3cb70b13c1392c3c883ab21ad149d9a 610 Gene3D G3DSA:3.30.420.340 377 552 7.7E-46 T 15-10-2018 IPR038476 UvrC homology region 2 superfamily XDD1_1675 d3cb70b13c1392c3c883ab21ad149d9a 610 SUPERFAMILY SSF82771 17 100 2.22E-24 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 XDD1_1675 d3cb70b13c1392c3c883ab21ad149d9a 610 SMART SM00278 588 607 61.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XDD1_1675 d3cb70b13c1392c3c883ab21ad149d9a 610 SMART SM00278 556 575 0.39 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XDD1_1675 d3cb70b13c1392c3c883ab21ad149d9a 610 Pfam PF14520 Helix-hairpin-helix domain 557 609 1.6E-6 T 15-10-2018 XDD1_1675 d3cb70b13c1392c3c883ab21ad149d9a 610 Gene3D G3DSA:3.40.1440.10 5 102 6.5E-32 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 XDD1_1675 d3cb70b13c1392c3c883ab21ad149d9a 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 7.1E-12 T 15-10-2018 IPR000305 GIY-YIG endonuclease XDD1_0211 d798341e5b84aadc296dd39b9eeebf11 302 SUPERFAMILY SSF46785 4 85 1.09E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_0211 d798341e5b84aadc296dd39b9eeebf11 302 Pfam PF03466 LysR substrate binding domain 95 296 5.6E-20 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_0211 d798341e5b84aadc296dd39b9eeebf11 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.8E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0211 d798341e5b84aadc296dd39b9eeebf11 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.8E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0211 d798341e5b84aadc296dd39b9eeebf11 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.8E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0211 d798341e5b84aadc296dd39b9eeebf11 302 Gene3D G3DSA:1.10.10.10 1 87 3.0E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0211 d798341e5b84aadc296dd39b9eeebf11 302 Gene3D G3DSA:3.40.190.10 90 295 2.2E-53 T 15-10-2018 XDD1_0211 d798341e5b84aadc296dd39b9eeebf11 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 2.0E-14 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0211 d798341e5b84aadc296dd39b9eeebf11 302 Gene3D G3DSA:3.40.190.10 172 270 2.2E-53 T 15-10-2018 XDD1_0211 d798341e5b84aadc296dd39b9eeebf11 302 SUPERFAMILY SSF53850 90 297 1.54E-36 T 15-10-2018 XDD1_3505 12d8e0ea05765307a79f762d13b31b82 472 SUPERFAMILY SSF51971 145 401 2.94E-69 T 15-10-2018 XDD1_3505 12d8e0ea05765307a79f762d13b31b82 472 SUPERFAMILY SSF46548 7 157 3.03E-41 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XDD1_3505 12d8e0ea05765307a79f762d13b31b82 472 Gene3D G3DSA:3.50.50.60 407 469 9.7E-24 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_3505 12d8e0ea05765307a79f762d13b31b82 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 7.8E-256 T 15-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 XDD1_3505 12d8e0ea05765307a79f762d13b31b82 472 Gene3D G3DSA:1.10.1060.10 11 145 3.9E-34 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XDD1_3505 12d8e0ea05765307a79f762d13b31b82 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 1.2E-37 T 15-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 XDD1_3505 12d8e0ea05765307a79f762d13b31b82 472 Gene3D G3DSA:3.50.50.60 146 263 6.5E-32 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_3505 12d8e0ea05765307a79f762d13b31b82 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 1.7E-38 T 15-10-2018 XDD1_3505 12d8e0ea05765307a79f762d13b31b82 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.7E-38 T 15-10-2018 XDD1_3505 12d8e0ea05765307a79f762d13b31b82 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.7E-38 T 15-10-2018 XDD1_3505 12d8e0ea05765307a79f762d13b31b82 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 1.7E-38 T 15-10-2018 XDD1_3505 12d8e0ea05765307a79f762d13b31b82 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 1.7E-38 T 15-10-2018 XDD1_3505 12d8e0ea05765307a79f762d13b31b82 472 Gene3D G3DSA:3.50.50.60 285 405 9.7E-24 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_3505 12d8e0ea05765307a79f762d13b31b82 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 1.8E-25 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XDD1_2070 ccb9b2bc3783de65fc24ca7c8ce2af47 267 Pfam PF00005 ABC transporter 35 164 1.9E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_2070 ccb9b2bc3783de65fc24ca7c8ce2af47 267 Gene3D G3DSA:3.40.50.300 7 256 8.2E-58 T 15-10-2018 XDD1_2070 ccb9b2bc3783de65fc24ca7c8ce2af47 267 SUPERFAMILY SSF52540 13 240 9.77E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2070 ccb9b2bc3783de65fc24ca7c8ce2af47 267 SMART SM00382 44 214 1.2E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1090 2a4915baf12447d27983f8296821af11 78 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 2 77 1.0E-24 T 15-10-2018 IPR021676 Protein of unknown function DUF3262 XDD1_1090 2a4915baf12447d27983f8296821af11 78 Pfam PF11660 Protein of unknown function (DUF3262) 1 77 6.0E-28 T 15-10-2018 IPR021676 Protein of unknown function DUF3262 XDD1_1459 2a4915baf12447d27983f8296821af11 78 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 2 77 1.0E-24 T 15-10-2018 IPR021676 Protein of unknown function DUF3262 XDD1_1459 2a4915baf12447d27983f8296821af11 78 Pfam PF11660 Protein of unknown function (DUF3262) 1 77 6.0E-28 T 15-10-2018 IPR021676 Protein of unknown function DUF3262 XDD1_0984 07703484c8282924593d24598a1d3ea1 181 Pfam PF13673 Acetyltransferase (GNAT) domain 59 159 3.8E-14 T 15-10-2018 IPR000182 GNAT domain XDD1_0984 07703484c8282924593d24598a1d3ea1 181 SUPERFAMILY SSF55729 27 179 5.24E-26 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_0984 07703484c8282924593d24598a1d3ea1 181 Gene3D G3DSA:3.40.630.30 15 181 4.0E-48 T 15-10-2018 XDD1_2394 eb1d84fa4bfb61029b7e4ff9329eab7b 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 9.2E-197 T 15-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 XDD1_2394 eb1d84fa4bfb61029b7e4ff9329eab7b 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 1.4E-160 T 15-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 XDD1_2394 eb1d84fa4bfb61029b7e4ff9329eab7b 488 Gene3D G3DSA:3.20.20.70 1 486 2.3E-207 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_2394 eb1d84fa4bfb61029b7e4ff9329eab7b 488 PIRSF PIRSF000130 1 487 1.1E-196 T 15-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 XDD1_2394 eb1d84fa4bfb61029b7e4ff9329eab7b 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.07 T 15-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 XDD1_2394 eb1d84fa4bfb61029b7e4ff9329eab7b 488 SUPERFAMILY SSF51412 1 477 1.57E-123 T 15-10-2018 XDD1_2394 eb1d84fa4bfb61029b7e4ff9329eab7b 488 SMART SM01240 7 473 0.0 T 15-10-2018 XDD1_2394 eb1d84fa4bfb61029b7e4ff9329eab7b 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 15-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 XDD1_2394 eb1d84fa4bfb61029b7e4ff9329eab7b 488 Pfam PF00571 CBS domain 149 202 5.5E-5 T 15-10-2018 IPR000644 CBS domain XDD1_2394 eb1d84fa4bfb61029b7e4ff9329eab7b 488 Pfam PF00571 CBS domain 95 140 1.1E-8 T 15-10-2018 IPR000644 CBS domain XDD1_2394 eb1d84fa4bfb61029b7e4ff9329eab7b 488 SMART SM00116 96 144 3.2E-11 T 15-10-2018 IPR000644 CBS domain XDD1_2394 eb1d84fa4bfb61029b7e4ff9329eab7b 488 SMART SM00116 158 206 3.3E-8 T 15-10-2018 IPR000644 CBS domain XDD1_2394 eb1d84fa4bfb61029b7e4ff9329eab7b 488 SUPERFAMILY SSF54631 94 203 2.27E-25 T 15-10-2018 XDD1_1496 d8b29590b0fab6bcc999ec30a437c8b7 358 SUPERFAMILY SSF56349 11 306 1.44E-52 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XDD1_1496 d8b29590b0fab6bcc999ec30a437c8b7 358 Gene3D G3DSA:1.10.150.130 9 123 3.2E-21 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal XDD1_1496 d8b29590b0fab6bcc999ec30a437c8b7 358 Gene3D G3DSA:1.10.443.10 125 308 2.6E-52 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XDD1_1496 d8b29590b0fab6bcc999ec30a437c8b7 358 Pfam PF00589 Phage integrase family 128 299 6.4E-39 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XDD1_1496 d8b29590b0fab6bcc999ec30a437c8b7 358 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 18 104 1.5E-5 T 15-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 XDD1_3299 b6d121f249421c3b570f5cd2c1ee9c9a 455 Gene3D G3DSA:2.30.42.10 125 224 1.5E-26 T 15-10-2018 XDD1_3299 b6d121f249421c3b570f5cd2c1ee9c9a 455 Pfam PF13180 PDZ domain 218 290 1.5E-7 T 15-10-2018 IPR001478 PDZ domain GO:0005515 XDD1_3299 b6d121f249421c3b570f5cd2c1ee9c9a 455 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 454 2.5E-149 T 15-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 XDD1_3299 b6d121f249421c3b570f5cd2c1ee9c9a 455 SUPERFAMILY SSF50156 199 297 1.84E-13 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 XDD1_3299 b6d121f249421c3b570f5cd2c1ee9c9a 455 SUPERFAMILY SSF50156 87 181 2.1E-12 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 XDD1_3299 b6d121f249421c3b570f5cd2c1ee9c9a 455 Pfam PF02163 Peptidase family M50 9 443 2.4E-85 T 15-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 XDD1_3299 b6d121f249421c3b570f5cd2c1ee9c9a 455 SMART SM00228 215 284 1.2E-7 T 15-10-2018 IPR001478 PDZ domain GO:0005515 XDD1_3299 b6d121f249421c3b570f5cd2c1ee9c9a 455 SMART SM00228 114 185 2.2E-4 T 15-10-2018 IPR001478 PDZ domain GO:0005515 XDD1_3299 b6d121f249421c3b570f5cd2c1ee9c9a 455 Gene3D G3DSA:2.30.42.10 225 312 6.3E-18 T 15-10-2018 XDD1_1350 6fc10c740e6f6a460006e8112dbebe06 134 PIRSF PIRSF003230 1 134 1.2E-44 T 15-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 XDD1_1350 6fc10c740e6f6a460006e8112dbebe06 134 SUPERFAMILY SSF54637 1 133 7.77E-40 T 15-10-2018 IPR029069 HotDog domain superfamily XDD1_1350 6fc10c740e6f6a460006e8112dbebe06 134 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 11 28 - T 15-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 XDD1_1350 6fc10c740e6f6a460006e8112dbebe06 134 Pfam PF03061 Thioesterase superfamily 21 102 1.9E-18 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 XDD1_1350 6fc10c740e6f6a460006e8112dbebe06 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 8.2E-41 T 15-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 XDD1_1350 6fc10c740e6f6a460006e8112dbebe06 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 1.1E-46 T 15-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 XDD1_1350 6fc10c740e6f6a460006e8112dbebe06 134 Gene3D G3DSA:3.10.129.10 1 134 3.8E-40 T 15-10-2018 XDD1_0476 b10f4de5405d8c4576264dc0d43997c1 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 8 152 24.272 T 15-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 XDD1_0476 b10f4de5405d8c4576264dc0d43997c1 152 Pfam PF02576 RimP N-terminal domain 13 84 8.9E-26 T 15-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal XDD1_0476 b10f4de5405d8c4576264dc0d43997c1 152 Gene3D G3DSA:3.30.300.70 2 81 2.6E-23 T 15-10-2018 IPR035956 RimP, N-terminal domain superfamily XDD1_0476 b10f4de5405d8c4576264dc0d43997c1 152 Pfam PF17384 RimP C-terminal SH3 domain 87 152 1.6E-21 T 15-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal XDD1_0476 b10f4de5405d8c4576264dc0d43997c1 152 SUPERFAMILY SSF74942 85 152 9.81E-18 T 15-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily XDD1_0476 b10f4de5405d8c4576264dc0d43997c1 152 SUPERFAMILY SSF75420 4 84 2.09E-22 T 15-10-2018 IPR035956 RimP, N-terminal domain superfamily XDD1_2415 50710ae1e628369514c9b50fa312d8ef 352 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 343 36.619 T 15-10-2018 IPR014524 Outer membrane protein assembly factor BamC XDD1_2415 50710ae1e628369514c9b50fa312d8ef 352 Pfam PF06804 NlpB/DapX lipoprotein 40 342 4.1E-106 T 15-10-2018 IPR010653 NlpB/DapX lipoprotein XDD1_2415 50710ae1e628369514c9b50fa312d8ef 352 Gene3D G3DSA:3.30.530.50 101 213 4.2E-37 T 15-10-2018 XDD1_2415 50710ae1e628369514c9b50fa312d8ef 352 PIRSF PIRSF026343 9 345 3.6E-104 T 15-10-2018 IPR014524 Outer membrane protein assembly factor BamC XDD1_2415 50710ae1e628369514c9b50fa312d8ef 352 Gene3D G3DSA:3.30.310.170 226 352 6.9E-48 T 15-10-2018 XDD1_3021 5a88fe6309fd4b75fdd71bcb057f81d9 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.786 T 15-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_3021 5a88fe6309fd4b75fdd71bcb057f81d9 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 360 2.6E-157 T 15-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_3021 5a88fe6309fd4b75fdd71bcb057f81d9 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 15-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_3021 5a88fe6309fd4b75fdd71bcb057f81d9 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 15-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_3021 5a88fe6309fd4b75fdd71bcb057f81d9 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 15-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_3021 5a88fe6309fd4b75fdd71bcb057f81d9 360 Pfam PF00953 Glycosyl transferase family 4 99 284 5.9E-37 T 15-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 XDD1_0316 fd4bad7917e43afda71a18bfe5248e68 195 SUPERFAMILY SSF55821 12 192 6.1E-53 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily XDD1_0316 fd4bad7917e43afda71a18bfe5248e68 195 Pfam PF01300 Telomere recombination 21 194 1.5E-40 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 XDD1_0316 fd4bad7917e43afda71a18bfe5248e68 195 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 12 193 40.567 T 15-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 XDD1_0316 fd4bad7917e43afda71a18bfe5248e68 195 Gene3D G3DSA:3.90.870.10 9 193 1.0E-60 T 15-10-2018 XDD1_2538 a316763e93dc97e5d49931440be649f0 230 Pfam PF00849 RNA pseudouridylate synthase 62 192 7.0E-18 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_2538 a316763e93dc97e5d49931440be649f0 230 SUPERFAMILY SSF55174 1 55 2.65E-12 T 15-10-2018 XDD1_2538 a316763e93dc97e5d49931440be649f0 230 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 9.8E-57 T 15-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 XDD1_2538 a316763e93dc97e5d49931440be649f0 230 Gene3D G3DSA:3.30.70.580 63 227 1.1E-59 T 15-10-2018 XDD1_2538 a316763e93dc97e5d49931440be649f0 230 SMART SM00363 1 58 3.5E-11 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_2538 a316763e93dc97e5d49931440be649f0 230 Pfam PF01479 S4 domain 1 47 1.3E-8 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_2538 a316763e93dc97e5d49931440be649f0 230 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 15-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 XDD1_2538 a316763e93dc97e5d49931440be649f0 230 Gene3D G3DSA:3.10.290.10 1 62 8.5E-20 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XDD1_2538 a316763e93dc97e5d49931440be649f0 230 Gene3D G3DSA:3.30.70.1560 128 209 1.1E-59 T 15-10-2018 XDD1_2538 a316763e93dc97e5d49931440be649f0 230 SUPERFAMILY SSF55120 61 227 1.18E-46 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_0299 6c5c717bfc6e916ce78de125a9163ac9 144 Gene3D G3DSA:3.100.10.10 70 144 6.5E-12 T 15-10-2018 XDD1_0299 6c5c717bfc6e916ce78de125a9163ac9 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 15-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0299 6c5c717bfc6e916ce78de125a9163ac9 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.111 T 15-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 XDD1_0299 6c5c717bfc6e916ce78de125a9163ac9 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.7E-31 T 15-10-2018 IPR021131 Ribosomal protein L18e/L15P XDD1_0299 6c5c717bfc6e916ce78de125a9163ac9 144 SUPERFAMILY SSF52080 4 143 4.19E-46 T 15-10-2018 IPR036227 Ribosomal L18e/L15P superfamily XDD1_0299 6c5c717bfc6e916ce78de125a9163ac9 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 8.6E-51 T 15-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_2816 d44f0773c00a867150d02bb39047c9ba 191 Gene3D G3DSA:1.10.1740.10 1 120 8.9E-46 T 15-10-2018 XDD1_2816 d44f0773c00a867150d02bb39047c9ba 191 SUPERFAMILY SSF88659 122 183 9.53E-18 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XDD1_2816 d44f0773c00a867150d02bb39047c9ba 191 Pfam PF04542 Sigma-70 region 2 25 91 3.6E-15 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 XDD1_2816 d44f0773c00a867150d02bb39047c9ba 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 15-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XDD1_2816 d44f0773c00a867150d02bb39047c9ba 191 SUPERFAMILY SSF88946 2 104 5.97E-30 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 XDD1_2816 d44f0773c00a867150d02bb39047c9ba 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 183 1.1E-29 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 XDD1_2816 d44f0773c00a867150d02bb39047c9ba 191 Pfam PF08281 Sigma-70, region 4 133 180 3.1E-18 T 15-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XDD1_2816 d44f0773c00a867150d02bb39047c9ba 191 Gene3D G3DSA:1.10.10.10 121 191 3.6E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2816 d44f0773c00a867150d02bb39047c9ba 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 1.7E-98 T 15-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XDD1_1596 f037eeb500184aa4d2eb9249d82138f9 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 1.2E-93 T 15-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 XDD1_1596 f037eeb500184aa4d2eb9249d82138f9 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 15-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 XDD1_1596 f037eeb500184aa4d2eb9249d82138f9 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 3.2E-157 T 15-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 XDD1_1596 f037eeb500184aa4d2eb9249d82138f9 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.411 T 15-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 XDD1_1596 f037eeb500184aa4d2eb9249d82138f9 336 SUPERFAMILY SSF51395 1 334 9.53E-106 T 15-10-2018 XDD1_1596 f037eeb500184aa4d2eb9249d82138f9 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 15-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 XDD1_1596 f037eeb500184aa4d2eb9249d82138f9 336 Gene3D G3DSA:3.20.20.70 1 336 4.4E-144 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_1596 f037eeb500184aa4d2eb9249d82138f9 336 PIRSF PIRSF000164 11 336 2.5E-97 T 15-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 XDD1_1850 3d32565828c607371bff5b249eac69ad 469 Gene3D G3DSA:3.40.1380.20 336 466 8.4E-40 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_1850 3d32565828c607371bff5b249eac69ad 469 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 15-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_1850 3d32565828c607371bff5b249eac69ad 469 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 468 7.4E-186 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_1850 3d32565828c607371bff5b249eac69ad 469 Pfam PF00224 Pyruvate kinase, barrel domain 1 340 9.5E-154 T 15-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_1850 3d32565828c607371bff5b249eac69ad 469 SUPERFAMILY SSF51621 1 338 7.68E-102 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XDD1_1850 3d32565828c607371bff5b249eac69ad 469 PRINTS PR01050 Pyruvate kinase family signature 217 243 2.5E-78 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_1850 3d32565828c607371bff5b249eac69ad 469 PRINTS PR01050 Pyruvate kinase family signature 59 75 2.5E-78 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_1850 3d32565828c607371bff5b249eac69ad 469 PRINTS PR01050 Pyruvate kinase family signature 244 268 2.5E-78 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_1850 3d32565828c607371bff5b249eac69ad 469 PRINTS PR01050 Pyruvate kinase family signature 294 312 2.5E-78 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_1850 3d32565828c607371bff5b249eac69ad 469 PRINTS PR01050 Pyruvate kinase family signature 269 293 2.5E-78 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_1850 3d32565828c607371bff5b249eac69ad 469 PRINTS PR01050 Pyruvate kinase family signature 186 200 2.5E-78 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_1850 3d32565828c607371bff5b249eac69ad 469 PRINTS PR01050 Pyruvate kinase family signature 313 329 2.5E-78 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_1850 3d32565828c607371bff5b249eac69ad 469 Gene3D G3DSA:2.40.33.10 71 167 2.0E-147 T 15-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_1850 3d32565828c607371bff5b249eac69ad 469 Gene3D G3DSA:3.20.20.60 4 332 2.0E-147 T 15-10-2018 XDD1_1850 3d32565828c607371bff5b249eac69ad 469 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 467 3.6E-25 T 15-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_1850 3d32565828c607371bff5b249eac69ad 469 SUPERFAMILY SSF52935 323 468 1.11E-32 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XDD1_1850 3d32565828c607371bff5b249eac69ad 469 SUPERFAMILY SSF50800 70 167 3.14E-30 T 15-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily XDD1_3470 6ec0efd14f537cc8f9d1d59b6da6c35b 774 Pfam PF03176 MMPL family 251 409 2.1E-8 T 15-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 XDD1_3470 6ec0efd14f537cc8f9d1d59b6da6c35b 774 SUPERFAMILY SSF82866 218 404 1.26E-20 T 15-10-2018 XDD1_3470 6ec0efd14f537cc8f9d1d59b6da6c35b 774 Gene3D G3DSA:1.20.1640.10 234 411 2.6E-8 T 15-10-2018 XDD1_3470 6ec0efd14f537cc8f9d1d59b6da6c35b 774 SUPERFAMILY SSF82866 638 765 2.35E-17 T 15-10-2018 XDD1_3522 b7f92d4bf1a298cc4b8edc8929e7d7f8 325 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 2.8E-83 T 15-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 XDD1_3522 b7f92d4bf1a298cc4b8edc8929e7d7f8 325 Gene3D G3DSA:1.20.58.1130 9 207 1.1E-86 T 15-10-2018 XDD1_3522 b7f92d4bf1a298cc4b8edc8929e7d7f8 325 Gene3D G3DSA:1.20.1420.30 35 310 1.1E-86 T 15-10-2018 XDD1_3522 b7f92d4bf1a298cc4b8edc8929e7d7f8 325 Pfam PF01699 Sodium/calcium exchanger protein 176 317 5.3E-30 T 15-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 XDD1_3522 b7f92d4bf1a298cc4b8edc8929e7d7f8 325 Pfam PF01699 Sodium/calcium exchanger protein 5 143 1.3E-24 T 15-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 XDD1_1103 ada7324b6085d78805b43b0b0fcae105 133 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 21 132 8.5E-39 T 15-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 XDD1_1103 ada7324b6085d78805b43b0b0fcae105 133 Pfam PF07511 Protein of unknown function (DUF1525) 21 131 6.9E-36 T 15-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 XDD1_3590 105132849b181859822881494c8e5934 598 Gene3D G3DSA:3.50.50.60 7 409 1.2E-162 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_3590 105132849b181859822881494c8e5934 598 SUPERFAMILY SSF56425 227 358 6.58E-42 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_3590 105132849b181859822881494c8e5934 598 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 1.4E-244 T 15-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_3590 105132849b181859822881494c8e5934 598 Gene3D G3DSA:3.90.700.10 237 363 1.2E-162 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_3590 105132849b181859822881494c8e5934 598 SUPERFAMILY SSF51905 3 432 4.33E-73 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_3590 105132849b181859822881494c8e5934 598 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 1.2E-38 T 15-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_3590 105132849b181859822881494c8e5934 598 PIRSF PIRSF000171 1 576 9.5E-42 T 15-10-2018 XDD1_3590 105132849b181859822881494c8e5934 598 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 15-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_3590 105132849b181859822881494c8e5934 598 Gene3D G3DSA:4.10.80.40 543 577 2.2E-18 T 15-10-2018 XDD1_3590 105132849b181859822881494c8e5934 598 SUPERFAMILY SSF46977 444 586 3.66E-46 T 15-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_3590 105132849b181859822881494c8e5934 598 Gene3D G3DSA:1.20.58.100 424 538 9.2E-35 T 15-10-2018 XDD1_3590 105132849b181859822881494c8e5934 598 Pfam PF00890 FAD binding domain 7 397 1.3E-113 T 15-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_3590 105132849b181859822881494c8e5934 598 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 6.1E-5 T 15-10-2018 XDD1_3590 105132849b181859822881494c8e5934 598 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 6.1E-5 T 15-10-2018 XDD1_3590 105132849b181859822881494c8e5934 598 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 15-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 XDD1_3590 105132849b181859822881494c8e5934 598 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.5E-9 T 15-10-2018 XDD1_3590 105132849b181859822881494c8e5934 598 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 1.5E-9 T 15-10-2018 XDD1_2780 75e441f2061fc3209da35d91b9670b24 431 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 4.1E-45 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XDD1_2780 75e441f2061fc3209da35d91b9670b24 431 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 4.1E-45 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XDD1_2780 75e441f2061fc3209da35d91b9670b24 431 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 4.1E-45 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XDD1_2780 75e441f2061fc3209da35d91b9670b24 431 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 4.1E-45 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XDD1_2780 75e441f2061fc3209da35d91b9670b24 431 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 4.1E-45 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XDD1_2780 75e441f2061fc3209da35d91b9670b24 431 PIRSF PIRSF036388 2 431 6.1E-223 T 15-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 XDD1_2780 75e441f2061fc3209da35d91b9670b24 431 Gene3D G3DSA:3.40.630.10 95 430 1.0E-104 T 15-10-2018 XDD1_2780 75e441f2061fc3209da35d91b9670b24 431 SUPERFAMILY SSF53187 107 428 3.11E-102 T 15-10-2018 XDD1_2780 75e441f2061fc3209da35d91b9670b24 431 Pfam PF12404 Peptidase 6 82 7.2E-32 T 15-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 XDD1_2780 75e441f2061fc3209da35d91b9670b24 431 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 15-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XDD1_2780 75e441f2061fc3209da35d91b9670b24 431 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 110 422 2.8E-103 T 15-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XDD1_1263 34132a3d3426fef7b7a6b191f0e31544 225 Hamap MF_00013 Octanoyltransferase [lipB]. 10 211 37.498 T 15-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XDD1_1263 34132a3d3426fef7b7a6b191f0e31544 225 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 32 209 2.2E-73 T 15-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XDD1_1263 34132a3d3426fef7b7a6b191f0e31544 225 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 80 133 9.0E-22 T 15-10-2018 XDD1_1263 34132a3d3426fef7b7a6b191f0e31544 225 Pfam PF03099 Biotin/lipoate A/B protein ligase family 64 163 9.1E-7 T 15-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 XDD1_1263 34132a3d3426fef7b7a6b191f0e31544 225 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 76 91 - T 15-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 XDD1_1263 34132a3d3426fef7b7a6b191f0e31544 225 PIRSF PIRSF016262 6 222 2.6E-58 T 15-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XDD1_1263 34132a3d3426fef7b7a6b191f0e31544 225 SUPERFAMILY SSF55681 6 211 1.33E-69 T 15-10-2018 XDD1_1263 34132a3d3426fef7b7a6b191f0e31544 225 Gene3D G3DSA:3.30.930.10 6 209 2.1E-61 T 15-10-2018 XDD1_1467 31030c6c68897c5e7bd5b883e5a1ce0b 81 SUPERFAMILY SSF54285 1 81 1.87E-22 T 15-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp XDD1_1467 31030c6c68897c5e7bd5b883e5a1ce0b 81 Gene3D G3DSA:3.10.20.30 1 81 8.9E-27 T 15-10-2018 IPR012675 Beta-grasp domain superfamily XDD1_1467 31030c6c68897c5e7bd5b883e5a1ce0b 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 6.7E-23 T 15-10-2018 XDD1_1467 31030c6c68897c5e7bd5b883e5a1ce0b 81 Pfam PF02597 ThiS family 4 81 1.1E-19 T 15-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 XDD1_3945 0da133ba38ce8dc7b9611f964d3eb60d 631 SUPERFAMILY SSF46785 571 627 3.54E-12 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3945 0da133ba38ce8dc7b9611f964d3eb60d 631 SUPERFAMILY SSF50465 290 370 1.73E-7 T 15-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal XDD1_3945 0da133ba38ce8dc7b9611f964d3eb60d 631 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 627 9.3E-196 T 15-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 XDD1_3945 0da133ba38ce8dc7b9611f964d3eb60d 631 SUPERFAMILY SSF46785 439 503 6.61E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3945 0da133ba38ce8dc7b9611f964d3eb60d 631 Pfam PF09106 Elongation factor SelB, winged helix 445 500 3.2E-15 T 15-10-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 XDD1_3945 0da133ba38ce8dc7b9611f964d3eb60d 631 SUPERFAMILY SSF52540 2 199 1.67E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3945 0da133ba38ce8dc7b9611f964d3eb60d 631 SUPERFAMILY SSF50447 185 308 1.63E-22 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XDD1_3945 0da133ba38ce8dc7b9611f964d3eb60d 631 Pfam PF00009 Elongation factor Tu GTP binding domain 3 161 1.3E-27 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3945 0da133ba38ce8dc7b9611f964d3eb60d 631 Pfam PF09107 Elongation factor SelB, winged helix 583 625 1.6E-18 T 15-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 XDD1_3945 0da133ba38ce8dc7b9611f964d3eb60d 631 Gene3D G3DSA:2.40.30.10 181 295 1.6E-23 T 15-10-2018 XDD1_3945 0da133ba38ce8dc7b9611f964d3eb60d 631 Gene3D G3DSA:3.40.50.300 1 166 1.7E-42 T 15-10-2018 XDD1_3945 0da133ba38ce8dc7b9611f964d3eb60d 631 Gene3D G3DSA:1.10.10.10 507 566 1.5E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3945 0da133ba38ce8dc7b9611f964d3eb60d 631 Gene3D G3DSA:1.10.10.10 567 627 2.5E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2982 c69bc483f5273aa884de254662a3c41e 413 SUPERFAMILY SSF51735 108 295 5.39E-58 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2982 c69bc483f5273aa884de254662a3c41e 413 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 1.8E-37 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 XDD1_2982 c69bc483f5273aa884de254662a3c41e 413 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 15-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XDD1_2982 c69bc483f5273aa884de254662a3c41e 413 Gene3D G3DSA:3.40.50.720 109 297 2.9E-109 T 15-10-2018 XDD1_2982 c69bc483f5273aa884de254662a3c41e 413 SUPERFAMILY SSF52283 7 137 5.53E-49 T 15-10-2018 XDD1_2982 c69bc483f5273aa884de254662a3c41e 413 Gene3D G3DSA:3.30.70.260 328 412 1.6E-30 T 15-10-2018 XDD1_2982 c69bc483f5273aa884de254662a3c41e 413 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 3.4E-51 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 XDD1_2982 c69bc483f5273aa884de254662a3c41e 413 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site XDD1_2982 c69bc483f5273aa884de254662a3c41e 413 Gene3D G3DSA:3.40.50.720 14 312 2.9E-109 T 15-10-2018 XDD1_2982 c69bc483f5273aa884de254662a3c41e 413 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site XDD1_2982 c69bc483f5273aa884de254662a3c41e 413 SUPERFAMILY SSF55021 338 412 2.0E-16 T 15-10-2018 XDD1_1947 9bd767745a345e1bd951f1305803c788 143 Pfam PF13551 Winged helix-turn helix 16 76 2.0E-11 T 15-10-2018 XDD1_1947 9bd767745a345e1bd951f1305803c788 143 SUPERFAMILY SSF46689 8 118 5.38E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2762 9bd767745a345e1bd951f1305803c788 143 Pfam PF13551 Winged helix-turn helix 16 76 2.0E-11 T 15-10-2018 XDD1_2762 9bd767745a345e1bd951f1305803c788 143 SUPERFAMILY SSF46689 8 118 5.38E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2609 9bd767745a345e1bd951f1305803c788 143 Pfam PF13551 Winged helix-turn helix 16 76 2.0E-11 T 15-10-2018 XDD1_2609 9bd767745a345e1bd951f1305803c788 143 SUPERFAMILY SSF46689 8 118 5.38E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2450 9bd767745a345e1bd951f1305803c788 143 Pfam PF13551 Winged helix-turn helix 16 76 2.0E-11 T 15-10-2018 XDD1_2450 9bd767745a345e1bd951f1305803c788 143 SUPERFAMILY SSF46689 8 118 5.38E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2690 9bd767745a345e1bd951f1305803c788 143 Pfam PF13551 Winged helix-turn helix 16 76 2.0E-11 T 15-10-2018 XDD1_2690 9bd767745a345e1bd951f1305803c788 143 SUPERFAMILY SSF46689 8 118 5.38E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1400 9bd767745a345e1bd951f1305803c788 143 Pfam PF13551 Winged helix-turn helix 16 76 2.0E-11 T 15-10-2018 XDD1_1400 9bd767745a345e1bd951f1305803c788 143 SUPERFAMILY SSF46689 8 118 5.38E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0240 9bd767745a345e1bd951f1305803c788 143 Pfam PF13551 Winged helix-turn helix 16 76 2.0E-11 T 15-10-2018 XDD1_0240 9bd767745a345e1bd951f1305803c788 143 SUPERFAMILY SSF46689 8 118 5.38E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3786 9bd767745a345e1bd951f1305803c788 143 Pfam PF13551 Winged helix-turn helix 16 76 2.0E-11 T 15-10-2018 XDD1_3786 9bd767745a345e1bd951f1305803c788 143 SUPERFAMILY SSF46689 8 118 5.38E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3859 9bd767745a345e1bd951f1305803c788 143 Pfam PF13551 Winged helix-turn helix 16 76 2.0E-11 T 15-10-2018 XDD1_3859 9bd767745a345e1bd951f1305803c788 143 SUPERFAMILY SSF46689 8 118 5.38E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1004 9bd767745a345e1bd951f1305803c788 143 Pfam PF13551 Winged helix-turn helix 16 76 2.0E-11 T 15-10-2018 XDD1_1004 9bd767745a345e1bd951f1305803c788 143 SUPERFAMILY SSF46689 8 118 5.38E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3211 9bd767745a345e1bd951f1305803c788 143 Pfam PF13551 Winged helix-turn helix 16 76 2.0E-11 T 15-10-2018 XDD1_3211 9bd767745a345e1bd951f1305803c788 143 SUPERFAMILY SSF46689 8 118 5.38E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1697 9bd767745a345e1bd951f1305803c788 143 Pfam PF13551 Winged helix-turn helix 16 76 2.0E-11 T 15-10-2018 XDD1_1697 9bd767745a345e1bd951f1305803c788 143 SUPERFAMILY SSF46689 8 118 5.38E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3881 9bd767745a345e1bd951f1305803c788 143 Pfam PF13551 Winged helix-turn helix 16 76 2.0E-11 T 15-10-2018 XDD1_3881 9bd767745a345e1bd951f1305803c788 143 SUPERFAMILY SSF46689 8 118 5.38E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0387 9bd767745a345e1bd951f1305803c788 143 Pfam PF13551 Winged helix-turn helix 16 76 2.0E-11 T 15-10-2018 XDD1_0387 9bd767745a345e1bd951f1305803c788 143 SUPERFAMILY SSF46689 8 118 5.38E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0237 9bd767745a345e1bd951f1305803c788 143 Pfam PF13551 Winged helix-turn helix 16 76 2.0E-11 T 15-10-2018 XDD1_0237 9bd767745a345e1bd951f1305803c788 143 SUPERFAMILY SSF46689 8 118 5.38E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2350 9bd767745a345e1bd951f1305803c788 143 Pfam PF13551 Winged helix-turn helix 16 76 2.0E-11 T 15-10-2018 XDD1_2350 9bd767745a345e1bd951f1305803c788 143 SUPERFAMILY SSF46689 8 118 5.38E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 SUPERFAMILY SSF56801 425 1005 1.83E-163 T 15-10-2018 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1361 1508 2.1E-21 T 15-10-2018 IPR010060 Non-ribosomal peptide synthase XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 SMART SM00823 Phosphopantetheine attachment site 992 1060 3.1E-4 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 SUPERFAMILY SSF52777 1702 1968 1.22E-43 T 15-10-2018 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 SUPERFAMILY SSF52777 1251 1483 1.56E-20 T 15-10-2018 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 SUPERFAMILY SSF52777 1072 1263 4.78E-29 T 15-10-2018 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 Gene3D G3DSA:3.30.559.30 1237 1486 1.6E-41 T 15-10-2018 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 Pfam PF00501 AMP-binding enzyme 1981 2067 1.4E-19 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 Pfam PF00501 AMP-binding enzyme 467 887 2.8E-101 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1016 1031 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 SUPERFAMILY SSF52777 199 454 3.22E-27 T 15-10-2018 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 Gene3D G3DSA:3.40.50.12780 457 879 2.1E-131 T 15-10-2018 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 SUPERFAMILY SSF47336 984 1056 1.14E-19 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 Pfam PF00550 Phosphopantetheine attachment site 994 1056 1.8E-12 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 488 911 2.8E-134 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 Pfam PF13193 AMP-binding enzyme C-terminal domain 895 967 4.2E-13 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 Gene3D G3DSA:3.40.50.980 1972 2070 7.7E-27 T 15-10-2018 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 SUPERFAMILY SSF52777 17 192 1.02E-23 T 15-10-2018 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 Gene3D G3DSA:3.30.559.30 203 453 5.7E-31 T 15-10-2018 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 Gene3D G3DSA:3.30.300.30 882 980 2.0E-32 T 15-10-2018 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 Gene3D G3DSA:3.30.559.30 1700 1957 2.5E-96 T 15-10-2018 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 Pfam PF00668 Condensation domain 11 446 1.0E-59 T 15-10-2018 IPR001242 Condensation domain XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 Pfam PF00668 Condensation domain 1076 1486 1.2E-51 T 15-10-2018 IPR001242 Condensation domain XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 Pfam PF00668 Condensation domain 1517 1961 5.7E-78 T 15-10-2018 IPR001242 Condensation domain XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 SUPERFAMILY SSF52777 1522 1699 9.0E-29 T 15-10-2018 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 ProSitePatterns PS00455 Putative AMP-binding domain signature. 621 632 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 SUPERFAMILY SSF56801 1939 2066 4.19E-28 T 15-10-2018 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 Gene3D G3DSA:3.30.559.10 1522 1891 2.5E-96 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 Gene3D G3DSA:3.30.559.10 1062 1236 7.6E-39 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 Gene3D G3DSA:1.10.1200.10 981 1061 5.7E-26 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1908 cc7d3d23e26d65a311745142dca33b88 2079 Gene3D G3DSA:3.30.559.10 16 202 4.3E-24 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2092 9315a3789c90787d22b6cb5b6261e7be 148 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 5 148 41.65 T 15-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 XDD1_2092 9315a3789c90787d22b6cb5b6261e7be 148 PIRSF PIRSF006173 1 148 2.4E-66 T 15-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 XDD1_2092 9315a3789c90787d22b6cb5b6261e7be 148 Pfam PF03692 Putative zinc- or iron-chelating domain 27 95 1.2E-8 T 15-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein XDD1_1275 610fed4a06593ae79610a131da3a3933 343 SUPERFAMILY SSF48019 212 336 3.91E-33 T 15-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 XDD1_1275 610fed4a06593ae79610a131da3a3933 343 SUPERFAMILY SSF52540 1 210 3.19E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1275 610fed4a06593ae79610a131da3a3933 343 Gene3D G3DSA:1.20.272.10 214 343 4.6E-45 T 15-10-2018 XDD1_1275 610fed4a06593ae79610a131da3a3933 343 Gene3D G3DSA:3.40.50.300 1 140 1.8E-47 T 15-10-2018 XDD1_1275 610fed4a06593ae79610a131da3a3933 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 21 332 3.7E-97 T 15-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 XDD1_1275 610fed4a06593ae79610a131da3a3933 343 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 337 2.8E-58 T 15-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_1275 610fed4a06593ae79610a131da3a3933 343 Gene3D G3DSA:1.10.8.60 143 213 9.6E-25 T 15-10-2018 XDD1_1275 610fed4a06593ae79610a131da3a3933 343 Pfam PF06144 DNA polymerase III, delta subunit 21 190 3.3E-43 T 15-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 XDD1_0277 576998c3f2deb568391d029af556872b 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.8E-33 T 15-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal XDD1_0277 576998c3f2deb568391d029af556872b 394 Gene3D G3DSA:3.40.50.300 1 203 2.0E-71 T 15-10-2018 XDD1_0277 576998c3f2deb568391d029af556872b 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site XDD1_0277 576998c3f2deb568391d029af556872b 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 2.0E-239 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XDD1_0277 576998c3f2deb568391d029af556872b 394 SUPERFAMILY SSF50465 298 393 3.17E-35 T 15-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal XDD1_0277 576998c3f2deb568391d029af556872b 394 SUPERFAMILY SSF50447 205 301 6.68E-32 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XDD1_0277 576998c3f2deb568391d029af556872b 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 9.8E-18 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XDD1_0277 576998c3f2deb568391d029af556872b 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_0277 576998c3f2deb568391d029af556872b 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_0277 576998c3f2deb568391d029af556872b 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_0277 576998c3f2deb568391d029af556872b 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_0277 576998c3f2deb568391d029af556872b 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_0277 576998c3f2deb568391d029af556872b 394 Gene3D G3DSA:2.40.30.10 338 393 9.6E-29 T 15-10-2018 XDD1_0277 576998c3f2deb568391d029af556872b 394 Gene3D G3DSA:2.40.30.10 206 334 2.8E-54 T 15-10-2018 XDD1_0277 576998c3f2deb568391d029af556872b 394 SUPERFAMILY SSF52540 6 219 4.57E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0277 576998c3f2deb568391d029af556872b 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 6.0E-59 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_0277 576998c3f2deb568391d029af556872b 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.531 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XDD1_0277 576998c3f2deb568391d029af556872b 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 2.1E-14 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XDD1_3188 815008e0cec393f536115a2d000c42ff 728 SUPERFAMILY SSF52096 6 304 8.03E-68 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XDD1_3188 815008e0cec393f536115a2d000c42ff 728 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 205 4.1E-41 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 XDD1_3188 815008e0cec393f536115a2d000c42ff 728 SUPERFAMILY SSF48179 623 714 2.47E-22 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XDD1_3188 815008e0cec393f536115a2d000c42ff 728 Gene3D G3DSA:1.10.1040.50 497 708 1.9E-71 T 15-10-2018 XDD1_3188 815008e0cec393f536115a2d000c42ff 728 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 15-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 XDD1_3188 815008e0cec393f536115a2d000c42ff 728 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 15-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 XDD1_3188 815008e0cec393f536115a2d000c42ff 728 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 XDD1_3188 815008e0cec393f536115a2d000c42ff 728 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 4.8E-24 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 XDD1_3188 815008e0cec393f536115a2d000c42ff 728 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 691 1.1E-5 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 XDD1_3188 815008e0cec393f536115a2d000c42ff 728 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 1.2E-61 T 15-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 XDD1_3188 815008e0cec393f536115a2d000c42ff 728 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 51.666 T 15-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 XDD1_3188 815008e0cec393f536115a2d000c42ff 728 SUPERFAMILY SSF48179 495 611 2.21E-28 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XDD1_3188 815008e0cec393f536115a2d000c42ff 728 SUPERFAMILY SSF51735 315 495 6.31E-59 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_3188 815008e0cec393f536115a2d000c42ff 728 Gene3D G3DSA:3.90.226.10 1 310 4.9E-93 T 15-10-2018 XDD1_3188 815008e0cec393f536115a2d000c42ff 728 Gene3D G3DSA:3.40.50.720 314 496 2.1E-67 T 15-10-2018 XDD1_0930 a70bc3780faecbf902d287b379f0a529 425 Gene3D G3DSA:1.20.1250.20 224 419 1.2E-20 T 15-10-2018 XDD1_0930 a70bc3780faecbf902d287b379f0a529 425 Gene3D G3DSA:1.20.1250.20 6 204 1.4E-18 T 15-10-2018 XDD1_0930 a70bc3780faecbf902d287b379f0a529 425 SUPERFAMILY SSF103473 6 417 1.44E-50 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0930 a70bc3780faecbf902d287b379f0a529 425 Pfam PF07690 Major Facilitator Superfamily 23 368 5.1E-23 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0129 f5df7fee6d8b21355ab6898b34f600a9 367 Gene3D G3DSA:3.40.50.2000 170 354 2.3E-67 T 15-10-2018 XDD1_0129 f5df7fee6d8b21355ab6898b34f600a9 367 SUPERFAMILY SSF53756 8 366 1.79E-84 T 15-10-2018 XDD1_0129 f5df7fee6d8b21355ab6898b34f600a9 367 Pfam PF13439 Glycosyltransferase Family 4 14 172 1.6E-12 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XDD1_0129 f5df7fee6d8b21355ab6898b34f600a9 367 Pfam PF00534 Glycosyl transferases group 1 182 347 1.0E-39 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 XDD1_0129 f5df7fee6d8b21355ab6898b34f600a9 367 Gene3D G3DSA:3.40.50.2000 14 355 2.3E-67 T 15-10-2018 XDD1_3824 66c8217443846ac869113b193103e720 1255 Gene3D G3DSA:2.60.40.10 573 679 3.3E-11 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_3824 66c8217443846ac869113b193103e720 1255 Gene3D G3DSA:2.60.40.10 691 792 4.1E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_3824 66c8217443846ac869113b193103e720 1255 Pfam PF02369 Bacterial Ig-like domain (group 1) 809 887 2.6E-8 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain XDD1_3824 66c8217443846ac869113b193103e720 1255 Gene3D G3DSA:2.60.40.10 797 892 3.1E-12 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_3824 66c8217443846ac869113b193103e720 1255 PRINTS PR01369 Intimin signature 190 205 2.6E-7 T 15-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 XDD1_3824 66c8217443846ac869113b193103e720 1255 PRINTS PR01369 Intimin signature 218 237 2.6E-7 T 15-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 XDD1_3824 66c8217443846ac869113b193103e720 1255 PRINTS PR01369 Intimin signature 286 305 2.6E-7 T 15-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 XDD1_3824 66c8217443846ac869113b193103e720 1255 SUPERFAMILY SSF49373 810 887 1.7E-10 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments XDD1_3824 66c8217443846ac869113b193103e720 1255 SUPERFAMILY SSF49373 572 653 3.66E-10 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments XDD1_3824 66c8217443846ac869113b193103e720 1255 SMART SM00634 576 673 0.025 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain XDD1_3824 66c8217443846ac869113b193103e720 1255 SMART SM00634 797 889 2.6E-4 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain XDD1_3824 66c8217443846ac869113b193103e720 1255 Gene3D G3DSA:2.40.160.160 100 345 1.4E-103 T 15-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily XDD1_3824 66c8217443846ac869113b193103e720 1255 Pfam PF11924 Inverse autotransporter, beta-domain 64 338 1.5E-108 T 15-10-2018 IPR024519 Inverse autotransporter, beta-domain XDD1_1340 75725b51f6ce0e219e48dea1d259f9b3 588 SUPERFAMILY SSF46977 452 588 4.71E-46 T 15-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_1340 75725b51f6ce0e219e48dea1d259f9b3 588 Gene3D G3DSA:3.90.700.10 246 350 3.1E-173 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_1340 75725b51f6ce0e219e48dea1d259f9b3 588 PIRSF PIRSF000171 1 580 8.7E-47 T 15-10-2018 XDD1_1340 75725b51f6ce0e219e48dea1d259f9b3 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 5.6E-35 T 15-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_1340 75725b51f6ce0e219e48dea1d259f9b3 588 Gene3D G3DSA:3.50.50.60 9 416 3.1E-173 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1340 75725b51f6ce0e219e48dea1d259f9b3 588 Pfam PF00890 FAD binding domain 9 405 1.1E-118 T 15-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_1340 75725b51f6ce0e219e48dea1d259f9b3 588 Gene3D G3DSA:4.10.80.40 548 588 9.5E-25 T 15-10-2018 XDD1_1340 75725b51f6ce0e219e48dea1d259f9b3 588 SUPERFAMILY SSF56425 236 356 2.39E-42 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_1340 75725b51f6ce0e219e48dea1d259f9b3 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 4.7E-5 T 15-10-2018 XDD1_1340 75725b51f6ce0e219e48dea1d259f9b3 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 4.7E-5 T 15-10-2018 XDD1_1340 75725b51f6ce0e219e48dea1d259f9b3 588 SUPERFAMILY SSF51905 4 440 1.25E-75 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1340 75725b51f6ce0e219e48dea1d259f9b3 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 15-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_1340 75725b51f6ce0e219e48dea1d259f9b3 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 2.3E-242 T 15-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_1340 75725b51f6ce0e219e48dea1d259f9b3 588 Gene3D G3DSA:1.20.58.100 431 547 2.9E-39 T 15-10-2018 XDD1_1340 75725b51f6ce0e219e48dea1d259f9b3 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 9.6E-276 T 15-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_2627 18c0034a8215f4bc4a2206c147c3ec0f 253 SUPERFAMILY SSF64288 113 252 9.58E-38 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily XDD1_2627 18c0034a8215f4bc4a2206c147c3ec0f 253 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 88 7.3E-19 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_2627 18c0034a8215f4bc4a2206c147c3ec0f 253 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 24 252 1.3E-98 T 15-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 XDD1_2627 18c0034a8215f4bc4a2206c147c3ec0f 253 SUPERFAMILY SSF46785 21 108 4.38E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_2627 18c0034a8215f4bc4a2206c147c3ec0f 253 SMART SM00345 29 88 1.3E-17 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_2627 18c0034a8215f4bc4a2206c147c3ec0f 253 SMART SM00866 109 246 8.0E-27 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 XDD1_2627 18c0034a8215f4bc4a2206c147c3ec0f 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 62 78 1.1E-7 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_2627 18c0034a8215f4bc4a2206c147c3ec0f 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 62 1.1E-7 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_2627 18c0034a8215f4bc4a2206c147c3ec0f 253 Pfam PF07702 UTRA domain 112 246 1.2E-30 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 XDD1_2627 18c0034a8215f4bc4a2206c147c3ec0f 253 Gene3D G3DSA:1.10.10.10 23 92 1.4E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2627 18c0034a8215f4bc4a2206c147c3ec0f 253 Gene3D G3DSA:3.40.1410.10 107 242 4.8E-28 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily XDD1_0938 6157d01d04dcae6b7a47cbe8dbb361e4 170 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 11 165 2.0E-64 T 15-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 XDD1_0938 6157d01d04dcae6b7a47cbe8dbb361e4 170 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 11 164 31.571 T 15-10-2018 IPR033747 Class I PurE XDD1_0938 6157d01d04dcae6b7a47cbe8dbb361e4 170 PIRSF PIRSF001338 6 169 8.2E-65 T 15-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 XDD1_0938 6157d01d04dcae6b7a47cbe8dbb361e4 170 SUPERFAMILY SSF52255 10 168 1.31E-64 T 15-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 XDD1_0938 6157d01d04dcae6b7a47cbe8dbb361e4 170 Pfam PF00731 AIR carboxylase 10 158 1.3E-61 T 15-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 XDD1_0938 6157d01d04dcae6b7a47cbe8dbb361e4 170 SMART SM01001 9 160 5.2E-97 T 15-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 XDD1_0938 6157d01d04dcae6b7a47cbe8dbb361e4 170 Gene3D G3DSA:3.40.50.7700 1 170 4.7E-74 T 15-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 XDD1_2089 e16492dde76455d50353ebe82c6f09ce 92 Pfam PF05166 YcgL domain 5 75 2.2E-32 T 15-10-2018 IPR027354 YcgL domain XDD1_2089 e16492dde76455d50353ebe82c6f09ce 92 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 81 6.0E-31 T 15-10-2018 IPR027354 YcgL domain XDD1_2089 e16492dde76455d50353ebe82c6f09ce 92 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 26.157 T 15-10-2018 IPR027354 YcgL domain XDD1_2089 e16492dde76455d50353ebe82c6f09ce 92 SUPERFAMILY SSF160191 1 89 1.57E-37 T 15-10-2018 IPR038068 YcgL-like superfamily XDD1_2089 e16492dde76455d50353ebe82c6f09ce 92 Gene3D G3DSA:3.10.510.20 1 74 1.5E-30 T 15-10-2018 IPR038068 YcgL-like superfamily XDD1_3474 036a7a381fabed9662d615ebd2d72681 242 Gene3D G3DSA:3.40.50.720 2 242 4.0E-75 T 15-10-2018 XDD1_3474 036a7a381fabed9662d615ebd2d72681 242 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 4 242 7.7E-134 T 15-10-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XDD1_3474 036a7a381fabed9662d615ebd2d72681 242 SUPERFAMILY SSF51735 2 241 1.13E-71 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_3474 036a7a381fabed9662d615ebd2d72681 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 241 1.4E-56 T 15-10-2018 XDD1_3474 036a7a381fabed9662d615ebd2d72681 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 2.8E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3474 036a7a381fabed9662d615ebd2d72681 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.8E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3474 036a7a381fabed9662d615ebd2d72681 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 2.8E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3474 036a7a381fabed9662d615ebd2d72681 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.5E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3474 036a7a381fabed9662d615ebd2d72681 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.5E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3474 036a7a381fabed9662d615ebd2d72681 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.5E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3474 036a7a381fabed9662d615ebd2d72681 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.5E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3474 036a7a381fabed9662d615ebd2d72681 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 3.5E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3474 036a7a381fabed9662d615ebd2d72681 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.5E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_1074 6b957abdd1ae135863e3ac24ad4e35d7 240 Pfam PF08900 Domain of unknown function (DUF1845) 15 231 1.2E-81 T 15-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 XDD1_1074 6b957abdd1ae135863e3ac24ad4e35d7 240 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 17 232 1.2E-76 T 15-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 XDD1_2955 82eeb83b2ac0026b9ee41bb3cc32ffd4 313 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 21 313 58.397 T 15-10-2018 IPR023009 Tyrosine recombinase XerC/XerD XDD1_2955 82eeb83b2ac0026b9ee41bb3cc32ffd4 313 Gene3D G3DSA:1.10.443.10 125 307 4.3E-80 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XDD1_2955 82eeb83b2ac0026b9ee41bb3cc32ffd4 313 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 23 104 1.4E-20 T 15-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 XDD1_2955 82eeb83b2ac0026b9ee41bb3cc32ffd4 313 Pfam PF00589 Phage integrase family 128 299 1.0E-55 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XDD1_2955 82eeb83b2ac0026b9ee41bb3cc32ffd4 313 Gene3D G3DSA:1.10.150.130 20 113 1.8E-17 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal XDD1_2955 82eeb83b2ac0026b9ee41bb3cc32ffd4 313 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 24 312 3.1E-117 T 15-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 XDD1_2955 82eeb83b2ac0026b9ee41bb3cc32ffd4 313 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 19 313 62.865 T 15-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 XDD1_2955 82eeb83b2ac0026b9ee41bb3cc32ffd4 313 SUPERFAMILY SSF47823 20 115 3.14E-34 T 15-10-2018 XDD1_2955 82eeb83b2ac0026b9ee41bb3cc32ffd4 313 SUPERFAMILY SSF56349 121 311 7.65E-59 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XDD1_0066 b70210d184dfd8c34c8b8a3188b68033 240 Gene3D G3DSA:1.10.150.240 24 94 6.0E-64 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 XDD1_0066 b70210d184dfd8c34c8b8a3188b68033 240 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 12 222 1.4E-74 T 15-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 XDD1_0066 b70210d184dfd8c34c8b8a3188b68033 240 Gene3D G3DSA:3.40.50.1000 12 217 6.0E-64 T 15-10-2018 IPR023214 HAD superfamily XDD1_0066 b70210d184dfd8c34c8b8a3188b68033 240 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 92 189 6.2E-10 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_0066 b70210d184dfd8c34c8b8a3188b68033 240 SUPERFAMILY SSF56784 5 224 2.85E-60 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_0066 b70210d184dfd8c34c8b8a3188b68033 240 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 9 225 36.629 T 15-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 XDD1_0066 b70210d184dfd8c34c8b8a3188b68033 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 6.8E-10 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_0066 b70210d184dfd8c34c8b8a3188b68033 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 6.8E-10 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_0066 b70210d184dfd8c34c8b8a3188b68033 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 6.8E-10 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_0066 b70210d184dfd8c34c8b8a3188b68033 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 6.8E-10 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_0066 b70210d184dfd8c34c8b8a3188b68033 240 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 84 194 1.3E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_0066 b70210d184dfd8c34c8b8a3188b68033 240 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 194 1.3E-37 T 15-10-2018 XDD1_0838 a4bee5dce92d5db977674667e3f1ccc3 368 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 XDD1_0838 a4bee5dce92d5db977674667e3f1ccc3 368 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 366 1.1E-71 T 15-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 XDD1_0838 a4bee5dce92d5db977674667e3f1ccc3 368 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 362 4.4E-147 T 15-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 XDD1_0838 a4bee5dce92d5db977674667e3f1ccc3 368 SUPERFAMILY SSF53597 145 363 3.27E-56 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XDD1_0838 a4bee5dce92d5db977674667e3f1ccc3 368 SUPERFAMILY SSF53927 4 146 9.21E-49 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 XDD1_0838 a4bee5dce92d5db977674667e3f1ccc3 368 PIRSF PIRSF006769 1 367 6.8E-129 T 15-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 XDD1_0838 a4bee5dce92d5db977674667e3f1ccc3 368 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 101 1.1E-20 T 15-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain XDD1_0838 a4bee5dce92d5db977674667e3f1ccc3 368 Gene3D G3DSA:3.40.140.10 1 141 1.5E-46 T 15-10-2018 XDD1_0838 a4bee5dce92d5db977674667e3f1ccc3 368 Pfam PF01872 RibD C-terminal domain 148 361 3.7E-56 T 15-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 XDD1_0838 a4bee5dce92d5db977674667e3f1ccc3 368 Gene3D G3DSA:3.40.430.10 142 367 1.3E-74 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XDD1_2413 75a1f1dc182d1c88bdfde606f0d77b22 150 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 5 132 1.0E-41 T 15-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame XDD1_2413 75a1f1dc182d1c88bdfde606f0d77b22 150 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 5 150 18.986 T 15-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame XDD1_2413 75a1f1dc182d1c88bdfde606f0d77b22 150 Pfam PF04284 Protein of unknown function (DUF441) 9 147 7.4E-48 T 15-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 Gene3D G3DSA:2.40.160.160 86 329 6.4E-89 T 15-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 SUPERFAMILY SSF49373 429 519 3.34E-16 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 PRINTS PR01369 Intimin signature 175 190 4.0E-5 T 15-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 PRINTS PR01369 Intimin signature 202 221 4.0E-5 T 15-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 PRINTS PR01369 Intimin signature 357 369 4.0E-5 T 15-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 Pfam PF09134 Invasin, domain 3 525 610 6.6E-8 T 15-10-2018 IPR015217 Invasin, domain 3 XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 Pfam PF11924 Inverse autotransporter, beta-domain 50 322 1.7E-95 T 15-10-2018 IPR024519 Inverse autotransporter, beta-domain XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 SUPERFAMILY SSF49373 617 704 1.96E-17 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 SUPERFAMILY SSF49373 522 612 3.73E-17 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 Pfam PF02369 Bacterial Ig-like domain (group 1) 715 791 2.1E-8 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 Pfam PF02369 Bacterial Ig-like domain (group 1) 808 883 2.3E-8 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 Pfam PF02369 Bacterial Ig-like domain (group 1) 430 506 4.6E-11 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 Pfam PF02369 Bacterial Ig-like domain (group 1) 619 696 2.9E-8 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 SUPERFAMILY SSF49373 805 888 7.85E-18 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 SUPERFAMILY SSF49373 712 796 1.67E-16 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 Gene3D G3DSA:2.60.40.10 712 799 4.9E-16 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 Gene3D G3DSA:2.60.40.10 803 890 6.4E-17 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 Gene3D G3DSA:2.60.40.10 617 706 1.3E-18 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 Gene3D G3DSA:2.60.40.10 428 518 7.8E-18 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 Gene3D G3DSA:2.60.40.10 521 612 4.9E-18 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 SMART SM00634 709 797 1.8E-8 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 SMART SM00634 615 703 1.5E-12 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 SMART SM00634 427 515 1.1E-12 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 SMART SM00634 803 890 1.1E-8 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain XDD1_1100 a51dc7248e3708f6b61471e91e09932a 1083 SMART SM00634 521 608 5.2E-9 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain XDD1_2649 0dc35025b783c55aa372a3119e79841b 378 SUPERFAMILY SSF52283 11 112 7.23E-18 T 15-10-2018 XDD1_2649 0dc35025b783c55aa372a3119e79841b 378 Gene3D G3DSA:3.40.50.720 6 280 1.0E-115 T 15-10-2018 XDD1_2649 0dc35025b783c55aa372a3119e79841b 378 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 4 360 47.74 T 15-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 XDD1_2649 0dc35025b783c55aa372a3119e79841b 378 SUPERFAMILY SSF51735 94 260 6.82E-35 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2649 0dc35025b783c55aa372a3119e79841b 378 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 122 149 - T 15-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XDD1_2649 0dc35025b783c55aa372a3119e79841b 378 Gene3D G3DSA:3.30.1370.170 296 377 8.1E-32 T 15-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 XDD1_2649 0dc35025b783c55aa372a3119e79841b 378 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 284 2.2E-17 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 XDD1_2649 0dc35025b783c55aa372a3119e79841b 378 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 200 216 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site XDD1_2649 0dc35025b783c55aa372a3119e79841b 378 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 259 4.9E-34 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 XDD1_2649 0dc35025b783c55aa372a3119e79841b 378 Gene3D G3DSA:3.40.50.720 95 260 1.0E-115 T 15-10-2018 XDD1_2649 0dc35025b783c55aa372a3119e79841b 378 Pfam PF11890 Domain of unknown function (DUF3410) 293 372 5.3E-29 T 15-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 XDD1_2310 25291ae7a75a287c10210809b7cc1dcc 567 PRINTS PR01009 Flagellar M-ring protein signature 154 168 6.1E-43 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 XDD1_2310 25291ae7a75a287c10210809b7cc1dcc 567 PRINTS PR01009 Flagellar M-ring protein signature 122 140 6.1E-43 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 XDD1_2310 25291ae7a75a287c10210809b7cc1dcc 567 PRINTS PR01009 Flagellar M-ring protein signature 372 396 6.1E-43 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 XDD1_2310 25291ae7a75a287c10210809b7cc1dcc 567 PRINTS PR01009 Flagellar M-ring protein signature 197 215 6.1E-43 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 XDD1_2310 25291ae7a75a287c10210809b7cc1dcc 567 PRINTS PR01009 Flagellar M-ring protein signature 266 284 6.1E-43 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 XDD1_2310 25291ae7a75a287c10210809b7cc1dcc 567 PIRSF PIRSF004862 4 567 1.4E-161 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 XDD1_2310 25291ae7a75a287c10210809b7cc1dcc 567 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 15 566 9.7E-167 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 XDD1_2310 25291ae7a75a287c10210809b7cc1dcc 567 Pfam PF01514 Secretory protein of YscJ/FliF family 33 221 9.5E-74 T 15-10-2018 IPR006182 Secretory protein YscJ/FliF XDD1_2310 25291ae7a75a287c10210809b7cc1dcc 567 Pfam PF08345 Flagellar M-ring protein C-terminal 253 447 2.2E-51 T 15-10-2018 IPR013556 Flagellar M-ring C-terminal XDD1_2310 25291ae7a75a287c10210809b7cc1dcc 567 Gene3D G3DSA:3.30.300.30 123 225 6.2E-10 T 15-10-2018 XDD1_1498 3cf23504eec4726287ed71e203689343 167 Pfam PF07262 CDI immunity protein 7 152 5.6E-6 T 15-10-2018 IPR009888 Immunity protein CdiI XDD1_1498 3cf23504eec4726287ed71e203689343 167 SUPERFAMILY SSF160207 2 154 3.79E-24 T 15-10-2018 IPR037891 Immunity protein Cdil-like superfamily XDD1_0836 fc1059fbcae04c9f642f4899f79d0ebd 333 Pfam PF07549 SecD/SecF GG Motif 52 77 3.6E-11 T 15-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site XDD1_0836 fc1059fbcae04c9f642f4899f79d0ebd 333 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 137 299 5.9E-56 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial XDD1_0836 fc1059fbcae04c9f642f4899f79d0ebd 333 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 28 313 28.506 T 15-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 XDD1_0836 fc1059fbcae04c9f642f4899f79d0ebd 333 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 56 302 3.4E-89 T 15-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 XDD1_0836 fc1059fbcae04c9f642f4899f79d0ebd 333 PRINTS PR01755 Bacterial translocase SecF protein signature 55 70 2.1E-33 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial XDD1_0836 fc1059fbcae04c9f642f4899f79d0ebd 333 PRINTS PR01755 Bacterial translocase SecF protein signature 170 184 2.1E-33 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial XDD1_0836 fc1059fbcae04c9f642f4899f79d0ebd 333 PRINTS PR01755 Bacterial translocase SecF protein signature 250 265 2.1E-33 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial XDD1_0836 fc1059fbcae04c9f642f4899f79d0ebd 333 PRINTS PR01755 Bacterial translocase SecF protein signature 218 236 2.1E-33 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial XDD1_0836 fc1059fbcae04c9f642f4899f79d0ebd 333 Pfam PF02355 Protein export membrane protein 128 311 1.6E-72 T 15-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial XDD1_0836 fc1059fbcae04c9f642f4899f79d0ebd 333 Gene3D G3DSA:1.20.1640.10 122 324 4.3E-16 T 15-10-2018 XDD1_0836 fc1059fbcae04c9f642f4899f79d0ebd 333 SUPERFAMILY SSF82866 92 313 1.06E-42 T 15-10-2018 XDD1_1265 4ea484c5b957276766f55bfd108dc48c 486 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 87 469 2.4E-108 T 15-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 XDD1_1265 4ea484c5b957276766f55bfd108dc48c 486 PIRSF PIRSF006247 2 486 1.4E-162 T 15-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 XDD1_1265 4ea484c5b957276766f55bfd108dc48c 486 Pfam PF02386 Cation transport protein 41 481 4.2E-89 T 15-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 XDD1_0592 851bf443f9b00215f3939259653dc6c7 306 TIGRFAM TIGR03638 cas1_ECOLI: CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI 7 273 3.3E-113 T 15-10-2018 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype GO:0004520|GO:0043571|GO:0046872 XDD1_0592 851bf443f9b00215f3939259653dc6c7 306 Gene3D G3DSA:3.100.10.20 1 95 1.4E-40 T 15-10-2018 XDD1_0592 851bf443f9b00215f3939259653dc6c7 306 Pfam PF01867 CRISPR associated protein Cas1 25 122 1.9E-5 T 15-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 XDD1_0592 851bf443f9b00215f3939259653dc6c7 306 Pfam PF01867 CRISPR associated protein Cas1 129 244 1.4E-10 T 15-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 XDD1_0592 851bf443f9b00215f3939259653dc6c7 306 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 14 280 17.86 T 15-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 XDD1_0592 851bf443f9b00215f3939259653dc6c7 306 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 17 245 9.3E-50 T 15-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 XDD1_0592 851bf443f9b00215f3939259653dc6c7 306 Gene3D G3DSA:1.20.120.920 96 292 7.1E-87 T 15-10-2018 XDD1_3383 62c1fd8a47e0c2d63e139179e332c7c7 217 SUPERFAMILY SSF55120 6 214 9.92E-64 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_3383 62c1fd8a47e0c2d63e139179e332c7c7 217 Pfam PF00849 RNA pseudouridylate synthase 21 167 5.4E-29 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_3383 62c1fd8a47e0c2d63e139179e332c7c7 217 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 7 215 2.1E-59 T 15-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_3383 62c1fd8a47e0c2d63e139179e332c7c7 217 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 59 73 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_3383 62c1fd8a47e0c2d63e139179e332c7c7 217 Gene3D G3DSA:3.30.2350.10 3 217 1.7E-71 T 15-10-2018 XDD1_2776 d993252f8202e7bbd680abe04fbcd57e 187 Pfam PF11188 Protein of unknown function (DUF2975) 67 185 2.3E-14 T 15-10-2018 IPR021354 Protein of unknown function DUF2975 XDD1_1321 8d2e390546e40c5ef83915f5419e12f6 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 102 1.3E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_1321 8d2e390546e40c5ef83915f5419e12f6 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 1.3E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_1321 8d2e390546e40c5ef83915f5419e12f6 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 1.3E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_1321 8d2e390546e40c5ef83915f5419e12f6 259 Pfam PF00561 alpha/beta hydrolase fold 22 118 2.6E-19 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_1321 8d2e390546e40c5ef83915f5419e12f6 259 SUPERFAMILY SSF53474 4 256 2.68E-51 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1321 8d2e390546e40c5ef83915f5419e12f6 259 Gene3D G3DSA:3.40.50.1820 7 257 9.2E-70 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1302 ab384d033cab0648c5ae8035381f5fad 150 SUPERFAMILY SSF46785 5 134 8.33E-44 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1302 ab384d033cab0648c5ae8035381f5fad 150 Gene3D G3DSA:1.10.10.10 1 83 6.5E-34 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1302 ab384d033cab0648c5ae8035381f5fad 150 Pfam PF01475 Ferric uptake regulator family 11 130 7.0E-46 T 15-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 XDD1_1302 ab384d033cab0648c5ae8035381f5fad 150 Gene3D G3DSA:3.30.1490.190 85 142 1.3E-23 T 15-10-2018 XDD1_1181 e1cfeaaca5e9a57692854592ef9d74bf 178 SUPERFAMILY SSF58113 29 165 1.16E-7 T 15-10-2018 XDD1_1181 e1cfeaaca5e9a57692854592ef9d74bf 178 Gene3D G3DSA:1.20.120.20 72 168 7.1E-10 T 15-10-2018 XDD1_0065 eac0fac9e54d486b71c63bc31ab8b4bb 344 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 22 31 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_0065 eac0fac9e54d486b71c63bc31ab8b4bb 344 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 13 340 1.1E-115 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XDD1_0065 eac0fac9e54d486b71c63bc31ab8b4bb 344 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 152 173 1.4E-28 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XDD1_0065 eac0fac9e54d486b71c63bc31ab8b4bb 344 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 76 95 1.4E-28 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XDD1_0065 eac0fac9e54d486b71c63bc31ab8b4bb 344 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 26 42 1.4E-28 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XDD1_0065 eac0fac9e54d486b71c63bc31ab8b4bb 344 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 205 215 1.4E-28 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XDD1_0065 eac0fac9e54d486b71c63bc31ab8b4bb 344 Gene3D G3DSA:1.10.240.10 196 308 6.8E-141 T 15-10-2018 XDD1_0065 eac0fac9e54d486b71c63bc31ab8b4bb 344 Gene3D G3DSA:3.40.50.620 16 339 6.8E-141 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_0065 eac0fac9e54d486b71c63bc31ab8b4bb 344 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 13 341 41.903 T 15-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 XDD1_0065 eac0fac9e54d486b71c63bc31ab8b4bb 344 SUPERFAMILY SSF52374 15 340 1.45E-96 T 15-10-2018 XDD1_0065 eac0fac9e54d486b71c63bc31ab8b4bb 344 Pfam PF00579 tRNA synthetases class I (W and Y) 12 295 1.1E-87 T 15-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_2503 efbbf3523da9db6c167fe8d4a3bee251 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 7.1E-50 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2503 efbbf3523da9db6c167fe8d4a3bee251 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 7.1E-50 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2503 efbbf3523da9db6c167fe8d4a3bee251 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 7.1E-50 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2503 efbbf3523da9db6c167fe8d4a3bee251 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 7.1E-50 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2503 efbbf3523da9db6c167fe8d4a3bee251 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 7.1E-50 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2503 efbbf3523da9db6c167fe8d4a3bee251 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 7.1E-50 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2503 efbbf3523da9db6c167fe8d4a3bee251 249 SUPERFAMILY SSF51735 9 248 1.88E-86 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2503 efbbf3523da9db6c167fe8d4a3bee251 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.4E-15 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2503 efbbf3523da9db6c167fe8d4a3bee251 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.4E-15 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2503 efbbf3523da9db6c167fe8d4a3bee251 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.4E-15 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2503 efbbf3523da9db6c167fe8d4a3bee251 249 Gene3D G3DSA:3.40.50.720 1 249 4.0E-88 T 15-10-2018 XDD1_2503 efbbf3523da9db6c167fe8d4a3bee251 249 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 13 247 3.4E-101 T 15-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XDD1_2503 efbbf3523da9db6c167fe8d4a3bee251 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 192 1.1E-4 T 15-10-2018 XDD1_2503 efbbf3523da9db6c167fe8d4a3bee251 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XDD1_2503 efbbf3523da9db6c167fe8d4a3bee251 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 246 2.9E-68 T 15-10-2018 XDD1_1167 bfc3764a7ffc5898770aaf8b353e85f8 193 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 8.1E-84 T 15-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 XDD1_1167 bfc3764a7ffc5898770aaf8b353e85f8 193 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.853 T 15-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 XDD1_1167 bfc3764a7ffc5898770aaf8b353e85f8 193 SUPERFAMILY SSF53697 1 189 1.17E-52 T 15-10-2018 XDD1_1167 bfc3764a7ffc5898770aaf8b353e85f8 193 Pfam PF13580 SIS domain 13 146 5.4E-32 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XDD1_1167 bfc3764a7ffc5898770aaf8b353e85f8 193 Gene3D G3DSA:3.40.50.10490 1 192 7.6E-73 T 15-10-2018 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 109.116 T 15-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 Gene3D G3DSA:3.40.50.670 704 803 3.7E-27 T 15-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 15-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 Gene3D G3DSA:3.10.20.690 592 683 1.1E-36 T 15-10-2018 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 Gene3D G3DSA:3.40.50.670 398 577 3.3E-74 T 15-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 4.0E-78 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 4.0E-78 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 4.0E-78 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 4.0E-78 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 4.0E-78 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 4.0E-78 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 4.0E-78 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 4.0E-78 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 4.0E-78 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 4.0E-78 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 Pfam PF00204 DNA gyrase B 221 390 8.0E-59 T 15-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 Gene3D G3DSA:3.30.230.10 221 392 3.4E-75 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 3.4E-71 T 15-10-2018 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 3.4E-71 T 15-10-2018 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 3.4E-71 T 15-10-2018 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 3.4E-71 T 15-10-2018 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 3.4E-71 T 15-10-2018 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 3.4E-71 T 15-10-2018 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 3.4E-71 T 15-10-2018 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 3.4E-71 T 15-10-2018 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 3.4E-71 T 15-10-2018 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 15-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 3.3E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 SUPERFAMILY SSF54211 221 392 1.29E-61 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 732 793 2.9E-30 T 15-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 SMART SM00387 31 175 1.6E-32 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 Gene3D G3DSA:3.30.565.10 1 220 5.1E-98 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 SUPERFAMILY SSF55874 4 220 1.83E-78 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 SUPERFAMILY SSF56719 394 795 7.85E-87 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 Pfam PF01751 Toprim domain 419 531 8.9E-18 T 15-10-2018 IPR006171 TOPRIM domain XDD1_0004 f9486116a0f64897a0f51a69d3953c85 804 SMART SM00433 35 797 1.4E-284 T 15-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XDD1_0207 694061784c970f94c28a6318bd13c18b 134 Gene3D G3DSA:3.10.450.50 7 133 5.1E-38 T 15-10-2018 XDD1_0207 694061784c970f94c28a6318bd13c18b 134 SUPERFAMILY SSF54427 11 132 1.4E-26 T 15-10-2018 IPR032710 NTF2-like domain superfamily XDD1_0207 694061784c970f94c28a6318bd13c18b 134 PIRSF PIRSF029394 4 134 1.0E-26 T 15-10-2018 IPR016918 Uncharacterised conserved protein UCP029394 XDD1_0425 865ad61d6b831865c8d251af5e428613 336 PIRSF PIRSF005651 1 333 1.5E-97 T 15-10-2018 IPR010200 HflC GO:0016021|GO:0052547 XDD1_0425 865ad61d6b831865c8d251af5e428613 336 SUPERFAMILY SSF117892 56 163 1.83E-17 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily XDD1_0425 865ad61d6b831865c8d251af5e428613 336 SMART SM00244 18 224 9.7E-43 T 15-10-2018 IPR001107 Band 7 domain XDD1_0425 865ad61d6b831865c8d251af5e428613 336 SUPERFAMILY SSF117892 194 231 9.29E-8 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily XDD1_0425 865ad61d6b831865c8d251af5e428613 336 Pfam PF01145 SPFH domain / Band 7 family 22 239 1.1E-33 T 15-10-2018 IPR001107 Band 7 domain XDD1_0425 865ad61d6b831865c8d251af5e428613 336 TIGRFAM TIGR01932 hflC: HflC protein 1 325 1.2E-122 T 15-10-2018 IPR010200 HflC GO:0016021|GO:0052547 XDD1_2807 09610ac704351abb601c3d349d920b8c 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 5.1E-103 T 15-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 XDD1_2807 09610ac704351abb601c3d349d920b8c 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 129.561 T 15-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 XDD1_2807 09610ac704351abb601c3d349d920b8c 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 237 2.5E-104 T 15-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 XDD1_2807 09610ac704351abb601c3d349d920b8c 243 SUPERFAMILY SSF63892 4 242 2.35E-100 T 15-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 XDD1_2807 09610ac704351abb601c3d349d920b8c 243 Gene3D G3DSA:3.20.20.70 1 243 2.4E-107 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_3107 c757ed5044b7180a007a64aa25f8bf99 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 29.84 T 15-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 XDD1_3107 c757ed5044b7180a007a64aa25f8bf99 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 15-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria XDD1_3107 c757ed5044b7180a007a64aa25f8bf99 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 15-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria XDD1_3107 c757ed5044b7180a007a64aa25f8bf99 151 SUPERFAMILY SSF57716 111 149 4.56E-10 T 15-10-2018 XDD1_3107 c757ed5044b7180a007a64aa25f8bf99 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 15-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site XDD1_3107 c757ed5044b7180a007a64aa25f8bf99 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 7.8E-51 T 15-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 XDD1_3107 c757ed5044b7180a007a64aa25f8bf99 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 110 143 2.4E-10 T 15-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 XDD1_3107 c757ed5044b7180a007a64aa25f8bf99 151 SUPERFAMILY SSF109635 9 109 6.28E-37 T 15-10-2018 IPR037187 DksA, N-terminal domain superfamily XDD1_3107 c757ed5044b7180a007a64aa25f8bf99 151 Gene3D G3DSA:1.20.120.910 20 150 1.4E-35 T 15-10-2018 XDD1_0982 c635eeecdf3f9227d4a3cbc88acec18d 156 Hamap MF_00042 Ribonuclease H [rnhA]. 2 150 36.876 T 15-10-2018 IPR022892 Ribonuclease HI GO:0004523 XDD1_0982 c635eeecdf3f9227d4a3cbc88acec18d 156 SUPERFAMILY SSF53098 3 143 2.02E-57 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0982 c635eeecdf3f9227d4a3cbc88acec18d 156 Gene3D G3DSA:3.30.420.10 1 155 1.2E-57 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_0982 c635eeecdf3f9227d4a3cbc88acec18d 156 Pfam PF00075 RNase H 3 141 1.2E-50 T 15-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 XDD1_3123 f97754720861e54395e9bf8083881afe 508 SMART SM00471 63 282 1.8E-9 T 15-10-2018 IPR003607 HD/PDEase domain XDD1_3123 f97754720861e54395e9bf8083881afe 508 Gene3D G3DSA:1.10.3210.10 162 256 2.1E-15 T 15-10-2018 XDD1_3123 f97754720861e54395e9bf8083881afe 508 Gene3D G3DSA:1.10.3210.10 1 161 7.0E-41 T 15-10-2018 XDD1_3123 f97754720861e54395e9bf8083881afe 508 Pfam PF13286 Phosphohydrolase-associated domain 380 503 3.0E-9 T 15-10-2018 IPR026875 Phosphohydrolase-associated domain XDD1_3123 f97754720861e54395e9bf8083881afe 508 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 31 505 1.2E-118 T 15-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 XDD1_3123 f97754720861e54395e9bf8083881afe 508 Gene3D G3DSA:1.10.3410.10 260 393 9.2E-21 T 15-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 XDD1_3123 f97754720861e54395e9bf8083881afe 508 SUPERFAMILY SSF109604 30 506 1.84E-63 T 15-10-2018 XDD1_3123 f97754720861e54395e9bf8083881afe 508 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 508 50.835 T 15-10-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 XDD1_3123 f97754720861e54395e9bf8083881afe 508 Pfam PF01966 HD domain 67 138 7.8E-9 T 15-10-2018 IPR006674 HD domain XDD1_1463 022185e4619b29dfcb76907d4d84cf71 96 SUPERFAMILY SSF46689 5 88 7.17E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1463 022185e4619b29dfcb76907d4d84cf71 96 Pfam PF13936 Helix-turn-helix domain 3 45 6.9E-16 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_0556 a75232474d1affebfd26ecd7c849c6c5 110 Gene3D G3DSA:2.30.30.110 1 110 1.4E-43 T 15-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor XDD1_0556 a75232474d1affebfd26ecd7c849c6c5 110 SUPERFAMILY SSF50118 5 109 1.74E-31 T 15-10-2018 XDD1_0556 a75232474d1affebfd26ecd7c849c6c5 110 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 9 107 3.1E-24 T 15-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 XDD1_2670 59de22f4ee6827d42c76be781708dcf5 403 Gene3D G3DSA:3.90.1150.10 23 389 2.7E-149 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_2670 59de22f4ee6827d42c76be781708dcf5 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_2670 59de22f4ee6827d42c76be781708dcf5 403 Pfam PF00202 Aminotransferase class-III 26 397 2.9E-120 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_2670 59de22f4ee6827d42c76be781708dcf5 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 13 397 2.7E-152 T 15-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 XDD1_2670 59de22f4ee6827d42c76be781708dcf5 403 PIRSF PIRSF000521 168 400 4.3E-36 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_2670 59de22f4ee6827d42c76be781708dcf5 403 PIRSF PIRSF000521 26 156 3.0E-4 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_2670 59de22f4ee6827d42c76be781708dcf5 403 SUPERFAMILY SSF53383 9 398 2.58E-121 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_2670 59de22f4ee6827d42c76be781708dcf5 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 5 401 5.7E-212 T 15-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 XDD1_2670 59de22f4ee6827d42c76be781708dcf5 403 Gene3D G3DSA:3.40.640.10 57 302 2.7E-149 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_2670 59de22f4ee6827d42c76be781708dcf5 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 400 67.529 T 15-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 XDD1_1586 be5f9c92852ee32b0aaa6e459f5692b3 237 SUPERFAMILY SSF56784 33 237 4.95E-67 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_1586 be5f9c92852ee32b0aaa6e459f5692b3 237 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 16 220 6.5E-34 T 15-10-2018 IPR005519 Acid phosphatase, class B-like XDD1_1586 be5f9c92852ee32b0aaa6e459f5692b3 237 TIGRFAM TIGR01672 AphA: HAD phosphatase, family IIIB 1 237 5.7E-95 T 15-10-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 XDD1_1586 be5f9c92852ee32b0aaa6e459f5692b3 237 PIRSF PIRSF017818 1 237 5.7E-111 T 15-10-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 XDD1_1586 be5f9c92852ee32b0aaa6e459f5692b3 237 Gene3D G3DSA:3.40.50.1000 24 237 9.4E-91 T 15-10-2018 IPR023214 HAD superfamily XDD1_1067 9c84efeae8584f8c6508cf2a8a4ad899 458 Pfam PF00772 DnaB-like helicase N terminal domain 16 116 1.3E-29 T 15-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 XDD1_1067 9c84efeae8584f8c6508cf2a8a4ad899 458 Pfam PF03796 DnaB-like helicase C terminal domain 191 448 8.3E-93 T 15-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 XDD1_1067 9c84efeae8584f8c6508cf2a8a4ad899 458 Gene3D G3DSA:3.40.50.300 171 453 2.6E-92 T 15-10-2018 XDD1_1067 9c84efeae8584f8c6508cf2a8a4ad899 458 Gene3D G3DSA:1.10.860.10 10 169 3.9E-45 T 15-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal XDD1_1067 9c84efeae8584f8c6508cf2a8a4ad899 458 SUPERFAMILY SSF52540 189 442 4.43E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1067 9c84efeae8584f8c6508cf2a8a4ad899 458 SMART SM00382 208 408 0.0044 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1067 9c84efeae8584f8c6508cf2a8a4ad899 458 SUPERFAMILY SSF48024 14 123 1.83E-33 T 15-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 XDD1_1067 9c84efeae8584f8c6508cf2a8a4ad899 458 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 16 450 1.6E-144 T 15-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 XDD1_2699 4610c5bf0661ca730247cb0312151db3 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XDD1_2699 4610c5bf0661ca730247cb0312151db3 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 248 3.7E-64 T 15-10-2018 XDD1_2699 4610c5bf0661ca730247cb0312151db3 250 Gene3D G3DSA:3.40.50.720 2 250 3.7E-76 T 15-10-2018 XDD1_2699 4610c5bf0661ca730247cb0312151db3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.6E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2699 4610c5bf0661ca730247cb0312151db3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.6E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2699 4610c5bf0661ca730247cb0312151db3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.6E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2699 4610c5bf0661ca730247cb0312151db3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.6E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2699 4610c5bf0661ca730247cb0312151db3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.6E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2699 4610c5bf0661ca730247cb0312151db3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.6E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2699 4610c5bf0661ca730247cb0312151db3 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.0E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2699 4610c5bf0661ca730247cb0312151db3 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 2.0E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2699 4610c5bf0661ca730247cb0312151db3 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 2.0E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2699 4610c5bf0661ca730247cb0312151db3 250 SUPERFAMILY SSF51735 5 249 4.66E-79 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0147 a263011156237166fc323a5f28bfd17f 398 SUPERFAMILY SSF53383 5 396 1.29E-124 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_0147 a263011156237166fc323a5f28bfd17f 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 2.7E-215 T 15-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 XDD1_0147 a263011156237166fc323a5f28bfd17f 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 15-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 XDD1_0147 a263011156237166fc323a5f28bfd17f 398 Gene3D G3DSA:3.90.1150.10 38 388 2.0E-139 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_0147 a263011156237166fc323a5f28bfd17f 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.467 T 15-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 XDD1_0147 a263011156237166fc323a5f28bfd17f 398 Gene3D G3DSA:3.40.640.10 58 296 2.0E-139 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_0147 a263011156237166fc323a5f28bfd17f 398 Pfam PF00155 Aminotransferase class I and II 43 386 8.5E-77 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XDD1_3366 b49bce451f4900d22ff95b2605794ebe 204 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site XDD1_3366 b49bce451f4900d22ff95b2605794ebe 204 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 33 3.2E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site XDD1_3366 b49bce451f4900d22ff95b2605794ebe 204 PIRSF PIRSF004525 8 203 1.6E-57 T 15-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted XDD1_3366 b49bce451f4900d22ff95b2605794ebe 204 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 34 4.5E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:3.30.559.30 1931 2177 1.2E-148 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:3.30.300.30 458 558 7.4E-33 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:3.30.300.30 3695 3797 5.5E-35 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:3.30.300.30 2601 2716 7.8E-35 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:3.30.300.30 4775 4883 2.6E-36 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:3.30.300.30 1534 1636 2.9E-33 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2233 2630 1.8E-139 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1161 1563 1.3E-138 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3322 3724 7.3E-137 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 86 487 2.9E-129 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4403 4805 1.2E-139 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SUPERFAMILY SSF47336 1641 1713 1.17E-17 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:3.40.50.12780 53 457 8.3E-137 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:3.40.50.12780 3289 3694 6.6E-143 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:3.40.50.12780 1126 1533 4.1E-144 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:3.40.50.12780 2199 2600 1.2E-144 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 ProSitePatterns PS00455 Putative AMP-binding domain signature. 4529 4540 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3832 3847 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:3.40.50.12780 4372 4773 1.0E-142 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SUPERFAMILY SSF52777 3920 4120 1.33E-29 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SUPERFAMILY SSF52777 1741 1927 4.78E-47 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SUPERFAMILY SSF52777 2844 3038 3.22E-30 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF00975 Thioesterase domain 4983 5239 8.8E-25 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2751 2766 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SUPERFAMILY SSF56801 4342 4909 1.03E-168 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SUPERFAMILY SSF47336 4888 4961 3.45E-16 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:3.30.559.30 3025 3277 8.9E-84 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF00668 Condensation domain 3922 4362 9.7E-45 T 15-10-2018 IPR001242 Condensation domain XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF00668 Condensation domain 2846 3280 3.0E-41 T 15-10-2018 IPR001242 Condensation domain XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF00668 Condensation domain 1738 2192 3.9E-105 T 15-10-2018 IPR001242 Condensation domain XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF00668 Condensation domain 685 1119 5.0E-45 T 15-10-2018 IPR001242 Condensation domain XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SUPERFAMILY SSF52777 4107 4352 2.67E-45 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:1.10.1200.10 2717 2797 1.9E-24 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:1.10.1200.10 559 641 1.8E-22 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SUPERFAMILY SSF47336 3800 3872 6.62E-18 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3443 3454 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SUPERFAMILY SSF52777 3025 3288 1.22E-45 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:3.40.50.1820 4965 5241 7.9E-48 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SUPERFAMILY SSF47336 2719 2791 1.73E-18 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SUPERFAMILY SSF52777 865 1126 2.33E-43 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SUPERFAMILY SSF52777 690 861 1.11E-29 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SUPERFAMILY SSF47336 563 635 5.9E-16 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SUPERFAMILY SSF56801 27 584 2.62E-155 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SUPERFAMILY SSF52777 1934 2175 4.89E-65 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SUPERFAMILY SSF56801 1101 1662 3.66E-163 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF00501 AMP-binding enzyme 1140 1539 1.1E-100 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF00501 AMP-binding enzyme 4382 4781 1.7E-106 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF00501 AMP-binding enzyme 3301 3700 5.2E-102 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF00501 AMP-binding enzyme 65 463 8.1E-96 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF00501 AMP-binding enzyme 2212 2606 3.4E-103 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SMART SM00823 Phosphopantetheine attachment site 2727 2795 0.0035 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SMART SM00823 Phosphopantetheine attachment site 4896 4964 0.57 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SMART SM00823 Phosphopantetheine attachment site 1649 1717 0.0025 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SMART SM00823 Phosphopantetheine attachment site 571 639 0.0087 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SMART SM00823 Phosphopantetheine attachment site 3808 3876 0.017 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 ProSitePatterns PS00012 Phosphopantetheine attachment site. 595 610 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF00550 Phosphopantetheine attachment site 3810 3871 4.0E-10 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF00550 Phosphopantetheine attachment site 4899 4960 3.6E-8 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF00550 Phosphopantetheine attachment site 2730 2789 6.5E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF00550 Phosphopantetheine attachment site 574 634 1.2E-9 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF00550 Phosphopantetheine attachment site 1652 1711 7.3E-10 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SUPERFAMILY SSF53474 4963 5229 1.22E-47 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1673 1688 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SUPERFAMILY SSF56801 2169 2740 5.63E-167 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF13193 AMP-binding enzyme C-terminal domain 4789 4869 4.4E-12 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF13193 AMP-binding enzyme C-terminal domain 471 544 6.1E-9 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF13193 AMP-binding enzyme C-terminal domain 2614 2700 2.1E-10 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF13193 AMP-binding enzyme C-terminal domain 1547 1622 1.0E-12 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Pfam PF13193 AMP-binding enzyme C-terminal domain 3708 3781 2.0E-11 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:3.30.559.10 690 1050 9.1E-83 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 ProSitePatterns PS00455 Putative AMP-binding domain signature. 206 217 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:3.30.559.30 864 1116 9.1E-83 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:3.30.559.30 4106 4358 3.0E-83 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:1.10.1200.10 3798 3882 5.2E-25 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2354 2365 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:3.30.559.10 3927 4292 3.0E-83 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 SUPERFAMILY SSF56801 3260 3821 7.46E-169 T 15-10-2018 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:1.10.1200.10 1637 1721 2.9E-25 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:1.10.1200.10 4884 4964 2.2E-21 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4920 4935 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1282 1293 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:3.30.559.10 1740 2121 1.2E-148 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_3571 177e2af6bdecfef24c7da8e1369fce12 5245 Gene3D G3DSA:3.30.559.10 2851 3211 8.9E-84 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_0304 8ef7b9348f4b09ccc622181e19b5149b 206 Pfam PF01479 S4 domain 97 143 3.1E-19 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0304 8ef7b9348f4b09ccc622181e19b5149b 206 SUPERFAMILY SSF55174 3 206 7.72E-74 T 15-10-2018 XDD1_0304 8ef7b9348f4b09ccc622181e19b5149b 206 SMART SM00363 96 160 9.9E-21 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0304 8ef7b9348f4b09ccc622181e19b5149b 206 Gene3D G3DSA:1.10.1050.10 1 102 1.3E-45 T 15-10-2018 XDD1_0304 8ef7b9348f4b09ccc622181e19b5149b 206 SMART SM01390 3 95 1.2E-48 T 15-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 XDD1_0304 8ef7b9348f4b09ccc622181e19b5149b 206 Gene3D G3DSA:3.10.290.10 103 191 1.5E-37 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XDD1_0304 8ef7b9348f4b09ccc622181e19b5149b 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 3.8E-32 T 15-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 XDD1_0304 8ef7b9348f4b09ccc622181e19b5149b 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 15-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0304 8ef7b9348f4b09ccc622181e19b5149b 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 1.1E-86 T 15-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 XDD1_0304 8ef7b9348f4b09ccc622181e19b5149b 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.461 T 15-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 XDD1_1955 94d516acaba402e576de5c0d9cfc9b64 824 Gene3D G3DSA:2.160.20.100 349 480 8.6E-18 T 15-10-2018 XDD1_1955 94d516acaba402e576de5c0d9cfc9b64 824 Pfam PF13599 Pentapeptide repeats (9 copies) 266 339 4.6E-11 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_1955 94d516acaba402e576de5c0d9cfc9b64 824 Pfam PF13599 Pentapeptide repeats (9 copies) 163 216 6.4E-8 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_1955 94d516acaba402e576de5c0d9cfc9b64 824 Pfam PF00805 Pentapeptide repeats (8 copies) 623 647 0.01 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_1955 94d516acaba402e576de5c0d9cfc9b64 824 Pfam PF00805 Pentapeptide repeats (8 copies) 572 610 1.4E-8 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_1955 94d516acaba402e576de5c0d9cfc9b64 824 Pfam PF00805 Pentapeptide repeats (8 copies) 537 560 0.0082 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_1955 94d516acaba402e576de5c0d9cfc9b64 824 Pfam PF00805 Pentapeptide repeats (8 copies) 416 452 2.9E-4 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_1955 94d516acaba402e576de5c0d9cfc9b64 824 SUPERFAMILY SSF141571 348 454 4.19E-17 T 15-10-2018 XDD1_1955 94d516acaba402e576de5c0d9cfc9b64 824 Gene3D G3DSA:2.160.20.80 126 245 7.7E-16 T 15-10-2018 XDD1_1955 94d516acaba402e576de5c0d9cfc9b64 824 Gene3D G3DSA:2.160.20.80 522 683 1.2E-20 T 15-10-2018 XDD1_1955 94d516acaba402e576de5c0d9cfc9b64 824 Gene3D G3DSA:2.160.20.100 246 348 1.5E-22 T 15-10-2018 XDD1_1955 94d516acaba402e576de5c0d9cfc9b64 824 SUPERFAMILY SSF141571 223 372 2.62E-26 T 15-10-2018 XDD1_1955 94d516acaba402e576de5c0d9cfc9b64 824 SUPERFAMILY SSF141571 139 241 6.15E-16 T 15-10-2018 XDD1_1955 94d516acaba402e576de5c0d9cfc9b64 824 SUPERFAMILY SSF141571 537 647 3.01E-18 T 15-10-2018 XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 SMART SM00464 10 202 1.5E-81 T 15-10-2018 IPR003111 Lon, substrate-binding domain XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 Gene3D G3DSA:3.40.50.300 314 490 8.5E-61 T 15-10-2018 XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 Gene3D G3DSA:1.10.8.60 491 584 7.2E-33 T 15-10-2018 XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 Gene3D G3DSA:2.30.130.40 1 118 6.5E-39 T 15-10-2018 XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 15-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 Gene3D G3DSA:1.20.58.1480 120 245 9.4E-46 T 15-10-2018 XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.472 T 15-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 1.4E-96 T 15-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 SUPERFAMILY SSF54211 595 770 1.67E-57 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 15-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 PIRSF PIRSF001174 1 775 0.0 T 15-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 SUPERFAMILY SSF52540 313 586 8.71E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 1.7E-43 T 15-10-2018 IPR003111 Lon, substrate-binding domain XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 SUPERFAMILY SSF88697 10 201 4.22E-52 T 15-10-2018 IPR015947 PUA-like superfamily XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 8.2E-57 T 15-10-2018 XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 8.2E-57 T 15-10-2018 XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 8.2E-57 T 15-10-2018 XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 8.2E-57 T 15-10-2018 XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 8.2E-57 T 15-10-2018 XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 Gene3D G3DSA:3.30.230.10 585 772 6.3E-86 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 1.2E-17 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_0878 f2820af54e8b6cac0b54f3d523cb4baf 784 SMART SM00382 348 492 1.3E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1787 64a412930d71af779d4c69e3aae47b57 78 Pfam PF01797 Transposase IS200 like 1 64 6.3E-17 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 XDD1_1787 64a412930d71af779d4c69e3aae47b57 78 SUPERFAMILY SSF143422 1 65 1.83E-19 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 XDD1_1787 64a412930d71af779d4c69e3aae47b57 78 SMART SM01321 1 65 0.0054 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 XDD1_1787 64a412930d71af779d4c69e3aae47b57 78 Gene3D G3DSA:3.30.70.1290 1 70 2.3E-21 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 Gene3D G3DSA:3.30.470.20 666 936 1.0E-124 T 15-10-2018 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 SUPERFAMILY SSF56059 674 934 8.49E-105 T 15-10-2018 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 6.3E-39 T 15-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 3 1053 0.0 T 15-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 SUPERFAMILY SSF52440 2 127 4.32E-49 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 Gene3D G3DSA:1.10.1030.10 404 522 3.6E-38 T 15-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 SUPERFAMILY SSF48108 396 554 1.96E-52 T 15-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 SUPERFAMILY SSF52335 939 1071 3.92E-34 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 Gene3D G3DSA:3.40.50.1380 937 1073 7.3E-35 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 SMART SM01096 424 547 2.5E-72 T 15-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 875 1.6E-37 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 6.2E-78 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 Gene3D G3DSA:3.40.50.20 524 663 7.5E-65 T 15-10-2018 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 SUPERFAMILY SSF56059 128 401 1.45E-112 T 15-10-2018 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 Gene3D G3DSA:3.40.50.20 1 116 5.6E-50 T 15-10-2018 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 SMART SM00851 956 1042 3.1E-30 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 3.2E-66 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 3.2E-66 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 3.2E-66 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 3.2E-66 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.2E-66 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.2E-66 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 3.2E-66 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 Gene3D G3DSA:3.30.470.20 119 403 1.2E-135 T 15-10-2018 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.181 T 15-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.418 T 15-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 SUPERFAMILY SSF52440 557 676 2.73E-49 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XDD1_0742 1033874e8bab4b8fa50d87b91a090302 1077 Pfam PF02142 MGS-like domain 957 1041 1.1E-17 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain XDD1_1868 185776269eb2f122d144bcc356f7a86c 292 Pfam PF08543 Phosphomethylpyrimidine kinase 74 257 2.1E-16 T 15-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 XDD1_1868 185776269eb2f122d144bcc356f7a86c 292 Gene3D G3DSA:3.40.1190.20 1 292 7.7E-90 T 15-10-2018 IPR029056 Ribokinase-like XDD1_1868 185776269eb2f122d144bcc356f7a86c 292 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 291 51.275 T 15-10-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 XDD1_1868 185776269eb2f122d144bcc356f7a86c 292 SUPERFAMILY SSF53613 1 285 9.04E-72 T 15-10-2018 IPR029056 Ribokinase-like XDD1_1868 185776269eb2f122d144bcc356f7a86c 292 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 289 1.2E-123 T 15-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 XDD1_2054 cf7ee02916229f97cb290443d43d466a 576 SMART SM00836 460 576 2.6E-38 T 15-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 XDD1_2054 cf7ee02916229f97cb290443d43d466a 576 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 1.9E-21 T 15-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XDD1_2054 cf7ee02916229f97cb290443d43d466a 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_2054 cf7ee02916229f97cb290443d43d466a 576 SUPERFAMILY SSF52374 108 453 1.38E-95 T 15-10-2018 XDD1_2054 cf7ee02916229f97cb290443d43d466a 576 Gene3D G3DSA:3.40.50.620 109 453 6.6E-109 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_2054 cf7ee02916229f97cb290443d43d466a 576 SUPERFAMILY SSF47323 454 576 1.5E-35 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_2054 cf7ee02916229f97cb290443d43d466a 576 SUPERFAMILY SSF55190 2 101 7.32E-22 T 15-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 XDD1_2054 cf7ee02916229f97cb290443d43d466a 576 Gene3D G3DSA:3.30.1360.70 1 106 2.3E-35 T 15-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 XDD1_2054 cf7ee02916229f97cb290443d43d466a 576 Gene3D G3DSA:1.10.730.10 454 576 1.7E-33 T 15-10-2018 XDD1_2054 cf7ee02916229f97cb290443d43d466a 576 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 576 28.967 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XDD1_2054 cf7ee02916229f97cb290443d43d466a 576 Pfam PF00750 tRNA synthetases class I (R) 101 446 9.6E-166 T 15-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 XDD1_2054 cf7ee02916229f97cb290443d43d466a 576 SMART SM01016 5 87 7.8E-28 T 15-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XDD1_2054 cf7ee02916229f97cb290443d43d466a 576 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 576 4.7E-206 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XDD1_2054 cf7ee02916229f97cb290443d43d466a 576 Pfam PF05746 DALR anticodon binding domain 460 576 3.3E-35 T 15-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 XDD1_2054 cf7ee02916229f97cb290443d43d466a 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 6.0E-26 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XDD1_2054 cf7ee02916229f97cb290443d43d466a 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 6.0E-26 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XDD1_2054 cf7ee02916229f97cb290443d43d466a 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 6.0E-26 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XDD1_2054 cf7ee02916229f97cb290443d43d466a 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 6.0E-26 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XDD1_3000 c8101f33b2d418fcc6ed5583e73b1a1b 157 Gene3D G3DSA:2.60.270.50 14 114 6.3E-13 T 15-10-2018 XDD1_3288 c43727f48c2fe7ea93f9f795b618a6a3 471 Pfam PF01171 PP-loop family 32 214 1.4E-58 T 15-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 XDD1_3288 c43727f48c2fe7ea93f9f795b618a6a3 471 SMART SM00977 392 464 1.5E-23 T 15-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XDD1_3288 c43727f48c2fe7ea93f9f795b618a6a3 471 Pfam PF11734 TilS substrate C-terminal domain 392 464 3.7E-24 T 15-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XDD1_3288 c43727f48c2fe7ea93f9f795b618a6a3 471 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 392 437 1.9E-12 T 15-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XDD1_3288 c43727f48c2fe7ea93f9f795b618a6a3 471 SUPERFAMILY SSF82829 250 335 6.41E-24 T 15-10-2018 XDD1_3288 c43727f48c2fe7ea93f9f795b618a6a3 471 Pfam PF09179 TilS substrate binding domain 266 331 2.4E-19 T 15-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XDD1_3288 c43727f48c2fe7ea93f9f795b618a6a3 471 Gene3D G3DSA:1.20.59.20 250 334 5.4E-29 T 15-10-2018 XDD1_3288 c43727f48c2fe7ea93f9f795b618a6a3 471 SUPERFAMILY SSF52402 25 249 1.1E-62 T 15-10-2018 XDD1_3288 c43727f48c2fe7ea93f9f795b618a6a3 471 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 32 219 7.5E-54 T 15-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XDD1_3288 c43727f48c2fe7ea93f9f795b618a6a3 471 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 16 326 24.33 T 15-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XDD1_3288 c43727f48c2fe7ea93f9f795b618a6a3 471 SUPERFAMILY SSF56037 341 466 4.71E-27 T 15-10-2018 XDD1_3288 c43727f48c2fe7ea93f9f795b618a6a3 471 Gene3D G3DSA:3.40.50.620 22 249 5.5E-73 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_0788 22dd3ec629b9347451d89e6069a3f196 639 SUPERFAMILY SSF53955 473 635 5.63E-47 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily XDD1_0788 22dd3ec629b9347451d89e6069a3f196 639 SUPERFAMILY SSF48435 24 471 2.88E-121 T 15-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 XDD1_0788 22dd3ec629b9347451d89e6069a3f196 639 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 495 523 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 XDD1_0788 22dd3ec629b9347451d89e6069a3f196 639 Pfam PF14718 Soluble lytic murein transglycosylase L domain 401 466 9.7E-21 T 15-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 XDD1_0788 22dd3ec629b9347451d89e6069a3f196 639 Gene3D G3DSA:1.10.1240.20 397 466 9.9E-25 T 15-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 XDD1_0788 22dd3ec629b9347451d89e6069a3f196 639 Gene3D G3DSA:1.25.20.10 24 383 6.8E-113 T 15-10-2018 XDD1_0788 22dd3ec629b9347451d89e6069a3f196 639 Gene3D G3DSA:1.10.530.10 467 639 6.7E-50 T 15-10-2018 XDD1_0788 22dd3ec629b9347451d89e6069a3f196 639 Pfam PF01464 Transglycosylase SLT domain 483 588 7.5E-31 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 591 597 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 320 895 5.9E-181 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 354 896 1.5E-112 T 15-10-2018 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 SUPERFAMILY SSF81653 390 487 4.45E-24 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 Gene3D G3DSA:3.40.1110.10 600 718 1.7E-91 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 Gene3D G3DSA:3.30.70.100 70 132 8.6E-12 T 15-10-2018 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 Pfam PF00122 E1-E2 ATPase 388 568 1.3E-49 T 15-10-2018 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 711 722 7.7E-25 T 15-10-2018 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 786 805 7.7E-25 T 15-10-2018 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 809 821 7.7E-25 T 15-10-2018 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 589 603 7.7E-25 T 15-10-2018 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 437 451 7.7E-25 T 15-10-2018 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 733 743 7.7E-25 T 15-10-2018 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 15-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 359 863 1.2E-85 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 SUPERFAMILY SSF55008 3 68 6.54E-12 T 15-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 Gene3D G3DSA:3.40.50.1000 570 838 1.7E-91 T 15-10-2018 IPR023214 HAD superfamily XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 SUPERFAMILY SSF55008 71 133 4.19E-12 T 15-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 SUPERFAMILY SSF56784 587 892 2.95E-60 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 Pfam PF00702 haloacid dehalogenase-like hydrolase 586 800 1.4E-47 T 15-10-2018 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 Gene3D G3DSA:2.70.150.20 375 491 5.8E-33 T 15-10-2018 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 Gene3D G3DSA:3.30.70.100 169 233 4.6E-20 T 15-10-2018 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 Gene3D G3DSA:3.30.70.100 6 66 1.6E-11 T 15-10-2018 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 301 895 3.6E-188 T 15-10-2018 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 SUPERFAMILY SSF81665 354 854 1.12E-11 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 Pfam PF00403 Heavy-metal-associated domain 72 128 2.0E-8 T 15-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 Pfam PF00403 Heavy-metal-associated domain 8 56 4.5E-7 T 15-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 Pfam PF00403 Heavy-metal-associated domain 173 227 2.5E-14 T 15-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 786 802 2.0E-6 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 817 842 2.0E-6 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 ProSitePatterns PS01047 Heavy-metal-associated domain. 173 202 - T 15-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 XDD1_0921 b19eadaaa9c273509ca12c4c01e901ec 902 SUPERFAMILY SSF55008 169 234 3.93E-19 T 15-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 XDD1_3877 5a80cc2b2523c4a75f133c8a6a58a17b 556 SUPERFAMILY SSF53328 9 195 1.31E-29 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XDD1_3877 5a80cc2b2523c4a75f133c8a6a58a17b 556 Gene3D G3DSA:3.40.50.12230 8 306 2.4E-42 T 15-10-2018 XDD1_3877 5a80cc2b2523c4a75f133c8a6a58a17b 556 Pfam PF00551 Formyl transferase 80 162 1.5E-13 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XDD1_3877 5a80cc2b2523c4a75f133c8a6a58a17b 556 SUPERFAMILY SSF50486 201 286 2.94E-6 T 15-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 XDD1_1870 96888defd7bf3ba64b58f69ffe16a172 269 Gene3D G3DSA:3.40.50.300 2 266 6.4E-73 T 15-10-2018 XDD1_1870 96888defd7bf3ba64b58f69ffe16a172 269 Pfam PF00005 ABC transporter 31 178 4.1E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1870 96888defd7bf3ba64b58f69ffe16a172 269 SUPERFAMILY SSF52540 5 250 1.6E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1870 96888defd7bf3ba64b58f69ffe16a172 269 SMART SM00382 39 228 7.5E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1870 96888defd7bf3ba64b58f69ffe16a172 269 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_0381 f6d4603f10c7386ce86807390057ed96 608 SMART SM00490 250 331 2.8E-30 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_0381 f6d4603f10c7386ce86807390057ed96 608 Pfam PF00570 HRDC domain 534 600 1.7E-22 T 15-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 XDD1_0381 f6d4603f10c7386ce86807390057ed96 608 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 14 603 4.3E-268 T 15-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 XDD1_0381 f6d4603f10c7386ce86807390057ed96 608 SMART SM00956 411 514 3.0E-55 T 15-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 XDD1_0381 f6d4603f10c7386ce86807390057ed96 608 SUPERFAMILY SSF47819 531 606 2.4E-25 T 15-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 XDD1_0381 f6d4603f10c7386ce86807390057ed96 608 SUPERFAMILY SSF52540 208 455 8.85E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0381 f6d4603f10c7386ce86807390057ed96 608 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 16 464 1.2E-197 T 15-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 XDD1_0381 f6d4603f10c7386ce86807390057ed96 608 Gene3D G3DSA:3.40.50.300 209 340 4.4E-44 T 15-10-2018 XDD1_0381 f6d4603f10c7386ce86807390057ed96 608 SMART SM00487 22 218 6.9E-34 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XDD1_0381 f6d4603f10c7386ce86807390057ed96 608 SUPERFAMILY SSF52540 14 202 1.49E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0381 f6d4603f10c7386ce86807390057ed96 608 SMART SM00341 530 608 1.2E-19 T 15-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 XDD1_0381 f6d4603f10c7386ce86807390057ed96 608 Pfam PF09382 RQC domain 406 516 2.8E-39 T 15-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 XDD1_0381 f6d4603f10c7386ce86807390057ed96 608 Gene3D G3DSA:3.40.50.300 2 208 1.1E-88 T 15-10-2018 XDD1_0381 f6d4603f10c7386ce86807390057ed96 608 Gene3D G3DSA:1.10.10.10 341 522 9.5E-53 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0381 f6d4603f10c7386ce86807390057ed96 608 Pfam PF16124 RecQ zinc-binding 343 404 2.0E-16 T 15-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain XDD1_0381 f6d4603f10c7386ce86807390057ed96 608 Pfam PF00271 Helicase conserved C-terminal domain 232 330 1.2E-20 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_0381 f6d4603f10c7386ce86807390057ed96 608 Gene3D G3DSA:1.10.150.80 523 607 4.5E-28 T 15-10-2018 XDD1_0381 f6d4603f10c7386ce86807390057ed96 608 Pfam PF00270 DEAD/DEAH box helicase 28 187 1.6E-20 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XDD1_1576 6a441738169b08aff6e85bdbd4ee130d 784 Pfam PF00753 Metallo-beta-lactamase superfamily 536 711 1.7E-17 T 15-10-2018 IPR001279 Metallo-beta-lactamase XDD1_1576 6a441738169b08aff6e85bdbd4ee130d 784 Pfam PF03772 Competence protein 233 501 4.5E-47 T 15-10-2018 IPR004477 ComEC/Rec2-related protein XDD1_1576 6a441738169b08aff6e85bdbd4ee130d 784 SMART SM00849 538 719 5.0E-12 T 15-10-2018 IPR001279 Metallo-beta-lactamase XDD1_1576 6a441738169b08aff6e85bdbd4ee130d 784 Pfam PF13567 Domain of unknown function (DUF4131) 54 187 1.1E-10 T 15-10-2018 IPR025405 Domain of unknown function DUF4131 XDD1_1576 6a441738169b08aff6e85bdbd4ee130d 784 SUPERFAMILY SSF56281 528 772 2.23E-42 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XDD1_1576 6a441738169b08aff6e85bdbd4ee130d 784 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 114 748 2.2E-173 T 15-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 XDD1_1576 6a441738169b08aff6e85bdbd4ee130d 784 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 254 437 3.5E-35 T 15-10-2018 IPR004477 ComEC/Rec2-related protein XDD1_1576 6a441738169b08aff6e85bdbd4ee130d 784 Gene3D G3DSA:3.60.15.10 528 759 5.4E-44 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XDD1_1845 d90251c51e7823644b6f388350c6ec4b 1024 SUPERFAMILY SSF46548 523 691 5.23E-7 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XDD1_1845 d90251c51e7823644b6f388350c6ec4b 1024 Pfam PF01565 FAD binding domain 52 192 6.0E-38 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 XDD1_1845 d90251c51e7823644b6f388350c6ec4b 1024 SUPERFAMILY SSF55103 258 542 7.03E-53 T 15-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 XDD1_1845 d90251c51e7823644b6f388350c6ec4b 1024 Pfam PF13183 4Fe-4S dicluster domain 576 687 1.9E-12 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XDD1_1845 d90251c51e7823644b6f388350c6ec4b 1024 SUPERFAMILY SSF56176 14 282 4.73E-54 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XDD1_1845 d90251c51e7823644b6f388350c6ec4b 1024 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 1.4E-63 T 15-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 XDD1_1845 d90251c51e7823644b6f388350c6ec4b 1024 Gene3D G3DSA:3.30.465.40 239 301 1.0E-5 T 15-10-2018 XDD1_1845 d90251c51e7823644b6f388350c6ec4b 1024 Gene3D G3DSA:3.30.465.40 17 219 6.6E-46 T 15-10-2018 XDD1_1845 d90251c51e7823644b6f388350c6ec4b 1024 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 673 684 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XDD1_2293 2553ef543654ff7361db5e591265461f 557 Pfam PF00005 ABC transporter 359 496 1.1E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_2293 2553ef543654ff7361db5e591265461f 557 SMART SM00382 366 554 4.1E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_2293 2553ef543654ff7361db5e591265461f 557 Gene3D G3DSA:3.40.50.300 334 557 9.1E-38 T 15-10-2018 XDD1_2293 2553ef543654ff7361db5e591265461f 557 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 7 547 3.7E-138 T 15-10-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015833|GO:0016021|GO:1904680 XDD1_2293 2553ef543654ff7361db5e591265461f 557 Pfam PF00664 ABC transporter transmembrane region 27 266 1.5E-10 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XDD1_2293 2553ef543654ff7361db5e591265461f 557 SUPERFAMILY SSF90123 12 315 1.23E-33 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_2293 2553ef543654ff7361db5e591265461f 557 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_2293 2553ef543654ff7361db5e591265461f 557 Gene3D G3DSA:1.20.1560.10 2 321 4.9E-30 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_2293 2553ef543654ff7361db5e591265461f 557 SUPERFAMILY SSF52540 335 547 3.28E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3193 6c0b147d09fbe72b59929e7546b16962 338 PIRSF PIRSF001415 3 336 9.7E-150 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XDD1_3193 6c0b147d09fbe72b59929e7546b16962 338 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 15-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XDD1_3193 6c0b147d09fbe72b59929e7546b16962 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 3.1E-55 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XDD1_3193 6c0b147d09fbe72b59929e7546b16962 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 3.1E-55 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XDD1_3193 6c0b147d09fbe72b59929e7546b16962 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 3.1E-55 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XDD1_3193 6c0b147d09fbe72b59929e7546b16962 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 3.1E-55 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XDD1_3193 6c0b147d09fbe72b59929e7546b16962 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 3.1E-55 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XDD1_3193 6c0b147d09fbe72b59929e7546b16962 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 3.1E-55 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XDD1_3193 6c0b147d09fbe72b59929e7546b16962 338 SUPERFAMILY SSF51569 8 335 1.59E-141 T 15-10-2018 XDD1_3193 6c0b147d09fbe72b59929e7546b16962 338 Gene3D G3DSA:3.20.20.70 4 337 6.0E-144 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_3193 6c0b147d09fbe72b59929e7546b16962 338 SMART SM01004 9 333 1.4E-239 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XDD1_3193 6c0b147d09fbe72b59929e7546b16962 338 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 8.3E-137 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XDD1_0673 b5878bca8b06ea0beb79339338cc2513 174 Hamap MF_00299 Probable RNA 2'-phosphotransferase [kptA]. 1 167 28.973 T 15-10-2018 IPR022928 RNA 2'-phosphotransferase KptA, putative GO:0016773 XDD1_0673 b5878bca8b06ea0beb79339338cc2513 174 Gene3D G3DSA:1.10.10.970 1 66 1.6E-13 T 15-10-2018 XDD1_0673 b5878bca8b06ea0beb79339338cc2513 174 SUPERFAMILY SSF56399 3 169 2.01E-51 T 15-10-2018 XDD1_0673 b5878bca8b06ea0beb79339338cc2513 174 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 2 160 2.6E-34 T 15-10-2018 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 XDD1_0673 b5878bca8b06ea0beb79339338cc2513 174 Gene3D G3DSA:3.20.170.30 87 174 2.0E-30 T 15-10-2018 XDD1_3286 531ba28a47a68e0bd1b659c63871b216 87 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 10 83 7.3E-27 T 15-10-2018 IPR009778 Modulator of Rho-dependent transcription termination XDD1_3286 531ba28a47a68e0bd1b659c63871b216 87 SUPERFAMILY SSF101744 5 85 8.89E-29 T 15-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 XDD1_3286 531ba28a47a68e0bd1b659c63871b216 87 Gene3D G3DSA:2.30.30.400 11 87 3.8E-29 T 15-10-2018 IPR038626 Rof-like superfamily XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 SUPERFAMILY SSF54211 304 496 3.59E-46 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 Pfam PF00575 S1 RNA binding domain 623 694 9.4E-22 T 15-10-2018 IPR003029 S1 domain GO:0003676 XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 695 0.0 T 15-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 Gene3D G3DSA:3.30.1370.10 554 625 6.0E-20 T 15-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 697 30.479 T 15-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 SUPERFAMILY SSF50249 611 696 3.08E-22 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 Gene3D G3DSA:2.40.50.140 626 696 2.3E-29 T 15-10-2018 XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 SUPERFAMILY SSF54211 4 144 5.06E-49 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 1.8E-18 T 15-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 Pfam PF01138 3' exoribonuclease family, domain 1 328 460 8.5E-22 T 15-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 Gene3D G3DSA:3.30.230.70 2 230 1.0E-78 T 15-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 SMART SM00322 556 621 2.4E-12 T 15-10-2018 IPR004087 K Homology domain GO:0003676 XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 SUPERFAMILY SSF54791 558 626 1.71E-17 T 15-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 SUPERFAMILY SSF55666 145 235 3.23E-31 T 15-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 PIRSF PIRSF005499 2 711 1.5E-298 T 15-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 8.0E-14 T 15-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 Pfam PF03725 3' exoribonuclease family, domain 2 464 531 7.0E-5 T 15-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 Gene3D G3DSA:3.30.230.70 235 553 1.2E-112 T 15-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 SUPERFAMILY SSF55666 454 552 1.68E-27 T 15-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 SUPERFAMILY SSF46915 239 324 3.92E-17 T 15-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 324 1.1E-23 T 15-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 Pfam PF00013 KH domain 560 618 1.0E-8 T 15-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 XDD1_0482 1f08e05272f495a108b1fdd4a2df2cf0 712 SMART SM00316 624 694 3.5E-27 T 15-10-2018 IPR022967 RNA-binding domain, S1 XDD1_2418 fde7307e056ed22784e4c4dfd78210f8 90 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 26 57 3.7E-5 T 15-10-2018 XDD1_2418 fde7307e056ed22784e4c4dfd78210f8 90 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 25 72 3.1E-6 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM XDD1_2418 fde7307e056ed22784e4c4dfd78210f8 90 SUPERFAMILY SSF143120 8 73 8.89E-10 T 15-10-2018 IPR036165 YefM-like superfamily XDD1_0927 2322b77fdd34fb6fd549ed20117d9567 193 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 16 174 4.6E-24 T 15-10-2018 IPR013830 SGNH hydrolase-type esterase domain XDD1_0927 2322b77fdd34fb6fd549ed20117d9567 193 SUPERFAMILY SSF52266 12 186 5.8E-49 T 15-10-2018 XDD1_0927 2322b77fdd34fb6fd549ed20117d9567 193 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 13 23 - T 15-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 XDD1_0927 2322b77fdd34fb6fd549ed20117d9567 193 Gene3D G3DSA:3.40.50.1110 10 193 1.4E-68 T 15-10-2018 IPR036514 SGNH hydrolase superfamily XDD1_0202 5c0f595289a4d0fa9eb9c13aef4181be 386 Gene3D G3DSA:3.40.640.10 2 247 1.9E-88 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_0202 5c0f595289a4d0fa9eb9c13aef4181be 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XDD1_0202 5c0f595289a4d0fa9eb9c13aef4181be 386 PIRSF PIRSF001434 3 384 5.5E-136 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XDD1_0202 5c0f595289a4d0fa9eb9c13aef4181be 386 Gene3D G3DSA:3.90.1150.10 248 385 2.8E-53 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_0202 5c0f595289a4d0fa9eb9c13aef4181be 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 382 5.5E-203 T 15-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 XDD1_0202 5c0f595289a4d0fa9eb9c13aef4181be 386 SUPERFAMILY SSF53383 7 381 3.13E-119 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_0202 5c0f595289a4d0fa9eb9c13aef4181be 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 381 1.8E-143 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XDD1_2513 3012cbd18e0cf7ca22dbcca1f52740bf 106 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 12 99 4.0E-38 T 15-10-2018 IPR007458 Protein of unknown function DUF496 XDD1_2513 3012cbd18e0cf7ca22dbcca1f52740bf 106 Pfam PF04363 Protein of unknown function (DUF496) 9 100 1.4E-45 T 15-10-2018 IPR007458 Protein of unknown function DUF496 XDD1_2513 3012cbd18e0cf7ca22dbcca1f52740bf 106 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 9 103 24.958 T 15-10-2018 IPR007458 Protein of unknown function DUF496 XDD1_2513 3012cbd18e0cf7ca22dbcca1f52740bf 106 PIRSF PIRSF028773 1 105 1.6E-49 T 15-10-2018 IPR007458 Protein of unknown function DUF496 XDD1_2770 78fe3bfd27d120934d4e16df4b8d2844 373 SUPERFAMILY SSF51604 23 139 1.02E-9 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily XDD1_2770 78fe3bfd27d120934d4e16df4b8d2844 373 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 3.2E-125 T 15-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 XDD1_2770 78fe3bfd27d120934d4e16df4b8d2844 373 SUPERFAMILY SSF56014 265 351 3.43E-10 T 15-10-2018 XDD1_2770 78fe3bfd27d120934d4e16df4b8d2844 373 Gene3D G3DSA:3.20.20.20 1 261 5.0E-105 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XDD1_2770 78fe3bfd27d120934d4e16df4b8d2844 373 PIRSF PIRSF004640 1 364 5.9E-146 T 15-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 XDD1_2770 78fe3bfd27d120934d4e16df4b8d2844 373 Pfam PF04551 GcpE protein 14 354 6.2E-131 T 15-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 XDD1_2770 78fe3bfd27d120934d4e16df4b8d2844 373 Gene3D G3DSA:3.30.413.10 262 360 2.2E-22 T 15-10-2018 XDD1_2770 78fe3bfd27d120934d4e16df4b8d2844 373 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 34.636 T 15-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 XDD1_2234 f20334269dc3be6a6bbee8cebf2a5c9a 565 Gene3D G3DSA:3.40.190.10 62 546 1.3E-200 T 15-10-2018 XDD1_2234 f20334269dc3be6a6bbee8cebf2a5c9a 565 Gene3D G3DSA:3.90.76.10 92 215 1.3E-200 T 15-10-2018 XDD1_2234 f20334269dc3be6a6bbee8cebf2a5c9a 565 PIRSF PIRSF002741 20 564 1.1E-108 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 XDD1_2234 f20334269dc3be6a6bbee8cebf2a5c9a 565 Gene3D G3DSA:3.10.105.10 318 534 1.3E-200 T 15-10-2018 XDD1_2234 f20334269dc3be6a6bbee8cebf2a5c9a 565 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 102 485 1.7E-89 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain XDD1_2234 f20334269dc3be6a6bbee8cebf2a5c9a 565 SUPERFAMILY SSF53850 56 547 8.69E-144 T 15-10-2018 XDD1_2234 f20334269dc3be6a6bbee8cebf2a5c9a 565 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 108 129 - T 15-10-2018 IPR023765 Solute-binding protein family 5, conserved site XDD1_1366 03ae81d5e4d12c99d6e8a3d67da1f6ac 230 SUPERFAMILY SSF161098 5 219 4.97E-51 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_1366 03ae81d5e4d12c99d6e8a3d67da1f6ac 230 Gene3D G3DSA:1.10.3720.10 2 224 2.2E-62 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_1366 03ae81d5e4d12c99d6e8a3d67da1f6ac 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 213 2.7E-21 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_1366 03ae81d5e4d12c99d6e8a3d67da1f6ac 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 11 220 2.6E-72 T 15-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 XDD1_0033 8b9ba3324d90613a9907b40cb06aa0c5 140 SUPERFAMILY SSF46604 89 138 1.54E-15 T 15-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0033 8b9ba3324d90613a9907b40cb06aa0c5 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 5.1E-28 T 15-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0033 8b9ba3324d90613a9907b40cb06aa0c5 140 SUPERFAMILY SSF51344 4 87 8.63E-24 T 15-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0033 8b9ba3324d90613a9907b40cb06aa0c5 140 Gene3D G3DSA:2.60.15.10 4 91 1.8E-31 T 15-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0033 8b9ba3324d90613a9907b40cb06aa0c5 140 Gene3D G3DSA:1.20.5.440 92 135 1.4E-18 T 15-10-2018 XDD1_0033 8b9ba3324d90613a9907b40cb06aa0c5 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.922 T 15-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0033 8b9ba3324d90613a9907b40cb06aa0c5 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 90 134 5.9E-12 T 15-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain XDD1_0033 8b9ba3324d90613a9907b40cb06aa0c5 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 4.0E-37 T 15-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0033 8b9ba3324d90613a9907b40cb06aa0c5 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 4.2E-45 T 15-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_3578 1c8e0fce44c9d297f2521a37f0a818d9 523 Pfam PF00448 SRP54-type protein, GTPase domain 320 519 6.1E-79 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XDD1_3578 1c8e0fce44c9d297f2521a37f0a818d9 523 SMART SM00963 225 305 1.4E-25 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XDD1_3578 1c8e0fce44c9d297f2521a37f0a818d9 523 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 248 520 64.927 T 15-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 XDD1_3578 1c8e0fce44c9d297f2521a37f0a818d9 523 Gene3D G3DSA:3.40.50.300 317 508 2.0E-118 T 15-10-2018 XDD1_3578 1c8e0fce44c9d297f2521a37f0a818d9 523 SMART SM00382 318 498 2.1E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3578 1c8e0fce44c9d297f2521a37f0a818d9 523 SMART SM00962 319 520 5.9E-125 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XDD1_3578 1c8e0fce44c9d297f2521a37f0a818d9 523 Pfam PF02881 SRP54-type protein, helical bundle domain 237 301 7.7E-13 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XDD1_3578 1c8e0fce44c9d297f2521a37f0a818d9 523 Gene3D G3DSA:1.20.120.140 222 518 2.0E-118 T 15-10-2018 XDD1_3578 1c8e0fce44c9d297f2521a37f0a818d9 523 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 248 519 9.2E-116 T 15-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 XDD1_3578 1c8e0fce44c9d297f2521a37f0a818d9 523 SUPERFAMILY SSF47364 220 299 2.69E-22 T 15-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 XDD1_3578 1c8e0fce44c9d297f2521a37f0a818d9 523 SUPERFAMILY SSF52540 316 519 8.07E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3578 1c8e0fce44c9d297f2521a37f0a818d9 523 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 493 506 - T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XDD1_1013 54343943d6b284c203eae8ddb1b03768 520 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 288 489 1.8E-66 T 15-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal XDD1_1013 54343943d6b284c203eae8ddb1b03768 520 Gene3D G3DSA:1.20.140.10 283 477 1.2E-66 T 15-10-2018 XDD1_1013 54343943d6b284c203eae8ddb1b03768 520 PIRSF PIRSF000331 11 501 9.2E-194 T 15-10-2018 IPR004925 HpaB/PvcC/4-BUDH XDD1_1013 54343943d6b284c203eae8ddb1b03768 520 TIGRFAM TIGR02310 HpaB-2: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 4 520 0.0 T 15-10-2018 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria GO:0010124|GO:0016712|GO:0050660 KEGG: 00350+1.14.14.9|MetaCyc: PWY-7431 XDD1_1013 54343943d6b284c203eae8ddb1b03768 520 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 15 281 2.5E-89 T 15-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal XDD1_1013 54343943d6b284c203eae8ddb1b03768 520 SUPERFAMILY SSF47203 272 493 1.57E-46 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 XDD1_1013 54343943d6b284c203eae8ddb1b03768 520 PIRSF PIRSF500125 2 518 2.8E-279 T 15-10-2018 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein XDD1_1013 54343943d6b284c203eae8ddb1b03768 520 SUPERFAMILY SSF56645 13 282 1.42E-79 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 XDD1_1013 54343943d6b284c203eae8ddb1b03768 520 Gene3D G3DSA:2.40.110.10 152 282 3.3E-38 T 15-10-2018 XDD1_1013 54343943d6b284c203eae8ddb1b03768 520 Gene3D G3DSA:1.10.3140.10 14 150 9.4E-42 T 15-10-2018 XDD1_3444 dc90ab34c40d88526a583e81c3da01f0 592 Pfam PF17289 Terminase RNaseH-like domain 415 573 1.0E-27 T 15-10-2018 IPR035421 Terminase, large subunit gp17-like XDD1_3444 dc90ab34c40d88526a583e81c3da01f0 592 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 8 64 6.8E-13 T 15-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 XDD1_3444 dc90ab34c40d88526a583e81c3da01f0 592 Gene3D G3DSA:3.30.420.240 374 574 8.2E-15 T 15-10-2018 XDD1_3444 dc90ab34c40d88526a583e81c3da01f0 592 Gene3D G3DSA:3.40.50.300 87 308 2.8E-23 T 15-10-2018 XDD1_3444 dc90ab34c40d88526a583e81c3da01f0 592 Pfam PF03237 Terminase-like family 166 387 4.8E-50 T 15-10-2018 IPR004921 Terminase large subunit, T4likevirus-type XDD1_2857 dc90ab34c40d88526a583e81c3da01f0 592 Pfam PF17289 Terminase RNaseH-like domain 415 573 1.0E-27 T 15-10-2018 IPR035421 Terminase, large subunit gp17-like XDD1_2857 dc90ab34c40d88526a583e81c3da01f0 592 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 8 64 6.8E-13 T 15-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 XDD1_2857 dc90ab34c40d88526a583e81c3da01f0 592 Gene3D G3DSA:3.30.420.240 374 574 8.2E-15 T 15-10-2018 XDD1_2857 dc90ab34c40d88526a583e81c3da01f0 592 Gene3D G3DSA:3.40.50.300 87 308 2.8E-23 T 15-10-2018 XDD1_2857 dc90ab34c40d88526a583e81c3da01f0 592 Pfam PF03237 Terminase-like family 166 387 4.8E-50 T 15-10-2018 IPR004921 Terminase large subunit, T4likevirus-type XDD1_2039 97752b9a7d408b65e36971bf5a284b8f 1237 Pfam PF06761 Intracellular multiplication and human macrophage-killing 535 844 1.8E-78 T 15-10-2018 IPR009612 ImcF-related XDD1_2039 97752b9a7d408b65e36971bf5a284b8f 1237 Pfam PF14331 ImcF-related N-terminal domain 208 483 3.4E-84 T 15-10-2018 IPR025743 ImcF-related, N-terminal domain XDD1_2039 97752b9a7d408b65e36971bf5a284b8f 1237 Pfam PF06744 Type VI secretion protein IcmF C-terminal 974 1175 1.6E-51 T 15-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal XDD1_2039 97752b9a7d408b65e36971bf5a284b8f 1237 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 15 1229 0.0 T 15-10-2018 IPR017731 Type VI secretion system, IcmF XDD1_2039 97752b9a7d408b65e36971bf5a284b8f 1237 SUPERFAMILY SSF52540 138 307 3.61E-6 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0305 1bd230bb5f08a8390a4e59223bb0ff39 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 7.5E-24 T 15-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_0305 1bd230bb5f08a8390a4e59223bb0ff39 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 6.9E-113 T 15-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_0305 1bd230bb5f08a8390a4e59223bb0ff39 329 Gene3D G3DSA:3.30.1360.10 17 228 6.0E-86 T 15-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_0305 1bd230bb5f08a8390a4e59223bb0ff39 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.558 T 15-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_0305 1bd230bb5f08a8390a4e59223bb0ff39 329 Gene3D G3DSA:2.170.120.12 53 177 6.0E-86 T 15-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_0305 1bd230bb5f08a8390a4e59223bb0ff39 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 15-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_0305 1bd230bb5f08a8390a4e59223bb0ff39 329 SUPERFAMILY SSF55257 6 231 1.57E-30 T 15-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_0305 1bd230bb5f08a8390a4e59223bb0ff39 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 15-10-2018 XDD1_0305 1bd230bb5f08a8390a4e59223bb0ff39 329 SMART SM00662 23 234 6.6E-105 T 15-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_0305 1bd230bb5f08a8390a4e59223bb0ff39 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 5.2E-23 T 15-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_0305 1bd230bb5f08a8390a4e59223bb0ff39 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 15-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_0305 1bd230bb5f08a8390a4e59223bb0ff39 329 Gene3D G3DSA:1.10.150.20 244 329 9.7E-39 T 15-10-2018 XDD1_0305 1bd230bb5f08a8390a4e59223bb0ff39 329 SUPERFAMILY SSF56553 53 178 1.66E-41 T 15-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_2221 2e99e8db9f9e27c9bd8caac782774a34 213 SUPERFAMILY SSF56925 23 213 1.46E-29 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel XDD1_2221 2e99e8db9f9e27c9bd8caac782774a34 213 Pfam PF03922 OmpW family 23 213 6.2E-65 T 15-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 XDD1_2221 2e99e8db9f9e27c9bd8caac782774a34 213 Gene3D G3DSA:2.40.160.20 22 213 3.3E-75 T 15-10-2018 XDD1_2622 4f20b67ad945941b315ef369e6b00a9a 732 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 329 508 1.1E-57 T 15-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 XDD1_2622 4f20b67ad945941b315ef369e6b00a9a 732 Pfam PF00378 Enoyl-CoA hydratase/isomerase 29 218 3.0E-41 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 XDD1_2622 4f20b67ad945941b315ef369e6b00a9a 732 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 508 533 - T 15-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 XDD1_2622 4f20b67ad945941b315ef369e6b00a9a 732 SUPERFAMILY SSF48179 638 731 4.0E-28 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XDD1_2622 4f20b67ad945941b315ef369e6b00a9a 732 Gene3D G3DSA:1.10.1040.50 514 726 7.1E-69 T 15-10-2018 XDD1_2622 4f20b67ad945941b315ef369e6b00a9a 732 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 21 731 0.0 T 15-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 XDD1_2622 4f20b67ad945941b315ef369e6b00a9a 732 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 119 139 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 XDD1_2622 4f20b67ad945941b315ef369e6b00a9a 732 SUPERFAMILY SSF48179 511 618 4.85E-28 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XDD1_2622 4f20b67ad945941b315ef369e6b00a9a 732 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 15 731 51.845 T 15-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 XDD1_2622 4f20b67ad945941b315ef369e6b00a9a 732 SUPERFAMILY SSF52096 16 318 4.23E-67 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XDD1_2622 4f20b67ad945941b315ef369e6b00a9a 732 Gene3D G3DSA:3.40.50.720 327 513 6.4E-61 T 15-10-2018 XDD1_2622 4f20b67ad945941b315ef369e6b00a9a 732 SUPERFAMILY SSF51735 326 508 1.38E-50 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2622 4f20b67ad945941b315ef369e6b00a9a 732 Gene3D G3DSA:3.90.226.10 16 325 5.0E-95 T 15-10-2018 XDD1_2622 4f20b67ad945941b315ef369e6b00a9a 732 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 511 604 9.9E-24 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 XDD1_2622 4f20b67ad945941b315ef369e6b00a9a 732 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 643 728 2.2E-8 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 XDD1_1079 fc11c00a07b65638092ebd7ebf27c913 176 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 37.694 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XDD1_1079 fc11c00a07b65638092ebd7ebf27c913 176 Pfam PF00436 Single-strand binding protein family 6 112 2.7E-41 T 15-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XDD1_1079 fc11c00a07b65638092ebd7ebf27c913 176 Gene3D G3DSA:2.40.50.140 2 155 9.1E-50 T 15-10-2018 XDD1_1079 fc11c00a07b65638092ebd7ebf27c913 176 SUPERFAMILY SSF50249 4 176 7.88E-55 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_1079 fc11c00a07b65638092ebd7ebf27c913 176 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 176 4.0E-55 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XDD1_1079 fc11c00a07b65638092ebd7ebf27c913 176 PIRSF PIRSF002070 2 166 5.0E-37 T 15-10-2018 XDD1_0581 c6fa14185d769390d005fb41241a21fc 139 Gene3D G3DSA:3.10.129.10 3 138 6.7E-31 T 15-10-2018 XDD1_0581 c6fa14185d769390d005fb41241a21fc 139 Pfam PF13279 Thioesterase-like superfamily 13 134 1.1E-8 T 15-10-2018 XDD1_0581 c6fa14185d769390d005fb41241a21fc 139 SUPERFAMILY SSF54637 5 136 5.1E-35 T 15-10-2018 IPR029069 HotDog domain superfamily XDD1_1025 e822cdf01d0dfc87ef0f32808335559a 254 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 245 8.0E-118 T 15-10-2018 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68 XDD1_1025 e822cdf01d0dfc87ef0f32808335559a 254 SUPERFAMILY SSF56529 37 245 6.15E-71 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 XDD1_1025 e822cdf01d0dfc87ef0f32808335559a 254 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 47 243 5.9E-58 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 XDD1_1025 e822cdf01d0dfc87ef0f32808335559a 254 Gene3D G3DSA:3.90.850.10 36 249 1.1E-75 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 XDD1_2436 e9519de480eb948fe67aa52eff7cdb9e 653 Gene3D G3DSA:3.60.120.10 10 400 5.7E-110 T 15-10-2018 IPR005801 ADC synthase GO:0009058 XDD1_2436 e9519de480eb948fe67aa52eff7cdb9e 653 SUPERFAMILY SSF52317 452 638 8.13E-23 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_2436 e9519de480eb948fe67aa52eff7cdb9e 653 PRINTS PR00097 Anthranilate synthase component II signature 453 467 6.2E-7 T 15-10-2018 XDD1_2436 e9519de480eb948fe67aa52eff7cdb9e 653 PRINTS PR00097 Anthranilate synthase component II signature 530 541 6.2E-7 T 15-10-2018 XDD1_2436 e9519de480eb948fe67aa52eff7cdb9e 653 PRINTS PR00097 Anthranilate synthase component II signature 616 629 6.2E-7 T 15-10-2018 XDD1_2436 e9519de480eb948fe67aa52eff7cdb9e 653 Pfam PF00425 chorismate binding enzyme 133 391 1.8E-46 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal XDD1_2436 e9519de480eb948fe67aa52eff7cdb9e 653 Pfam PF00117 Glutamine amidotransferase class-I 455 628 5.0E-19 T 15-10-2018 IPR017926 Glutamine amidotransferase XDD1_2436 e9519de480eb948fe67aa52eff7cdb9e 653 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 494 508 1.4E-5 T 15-10-2018 XDD1_2436 e9519de480eb948fe67aa52eff7cdb9e 653 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 530 546 1.4E-5 T 15-10-2018 XDD1_2436 e9519de480eb948fe67aa52eff7cdb9e 653 SUPERFAMILY SSF56322 107 399 6.15E-60 T 15-10-2018 IPR005801 ADC synthase GO:0009058 XDD1_2436 e9519de480eb948fe67aa52eff7cdb9e 653 Gene3D G3DSA:3.40.50.880 451 650 7.0E-32 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_2436 e9519de480eb948fe67aa52eff7cdb9e 653 PRINTS PR00096 Glutamine amidotransferase superfamily signature 616 629 2.0E-8 T 15-10-2018 XDD1_2436 e9519de480eb948fe67aa52eff7cdb9e 653 PRINTS PR00096 Glutamine amidotransferase superfamily signature 497 506 2.0E-8 T 15-10-2018 XDD1_2436 e9519de480eb948fe67aa52eff7cdb9e 653 PRINTS PR00096 Glutamine amidotransferase superfamily signature 530 541 2.0E-8 T 15-10-2018 XDD1_2781 fcc52a966da7c359cf935c4cc9cd385b 64 Gene3D G3DSA:1.10.10.600 1 64 5.2E-31 T 15-10-2018 IPR036762 IscX-like superfamily XDD1_2781 fcc52a966da7c359cf935c4cc9cd385b 64 PIRSF PIRSF039003 1 64 1.1E-33 T 15-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 XDD1_2781 fcc52a966da7c359cf935c4cc9cd385b 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 1.7E-32 T 15-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 XDD1_2781 fcc52a966da7c359cf935c4cc9cd385b 64 Pfam PF04384 Iron-sulphur cluster assembly 1 64 7.2E-34 T 15-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 XDD1_2781 fcc52a966da7c359cf935c4cc9cd385b 64 SUPERFAMILY SSF140319 1 63 1.7E-27 T 15-10-2018 IPR036762 IscX-like superfamily XDD1_1561 34d7494f16b01718f017fe8a5b1e651e 429 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 422 1.5E-177 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XDD1_1561 34d7494f16b01718f017fe8a5b1e651e 429 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 427 41.235 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XDD1_1561 34d7494f16b01718f017fe8a5b1e651e 429 Gene3D G3DSA:3.30.930.10 105 429 7.6E-113 T 15-10-2018 XDD1_1561 34d7494f16b01718f017fe8a5b1e651e 429 SUPERFAMILY SSF46589 1 110 4.29E-29 T 15-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 XDD1_1561 34d7494f16b01718f017fe8a5b1e651e 429 Gene3D G3DSA:1.10.287.40 1 104 1.7E-20 T 15-10-2018 XDD1_1561 34d7494f16b01718f017fe8a5b1e651e 429 SUPERFAMILY SSF55681 116 423 1.16E-98 T 15-10-2018 XDD1_1561 34d7494f16b01718f017fe8a5b1e651e 429 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 224 405 6.1E-36 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_1561 34d7494f16b01718f017fe8a5b1e651e 429 PIRSF PIRSF001529 1 429 6.9E-181 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XDD1_1561 34d7494f16b01718f017fe8a5b1e651e 429 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 2.3E-30 T 15-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 XDD1_1561 34d7494f16b01718f017fe8a5b1e651e 429 PRINTS PR00981 Seryl-tRNA synthetase signature 338 354 1.0E-32 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XDD1_1561 34d7494f16b01718f017fe8a5b1e651e 429 PRINTS PR00981 Seryl-tRNA synthetase signature 356 372 1.0E-32 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XDD1_1561 34d7494f16b01718f017fe8a5b1e651e 429 PRINTS PR00981 Seryl-tRNA synthetase signature 269 281 1.0E-32 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XDD1_1561 34d7494f16b01718f017fe8a5b1e651e 429 PRINTS PR00981 Seryl-tRNA synthetase signature 321 334 1.0E-32 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XDD1_1561 34d7494f16b01718f017fe8a5b1e651e 429 PRINTS PR00981 Seryl-tRNA synthetase signature 281 294 1.0E-32 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XDD1_2459 86ac5d5aa2a8b256e99ce332366544a5 384 Pfam PF07690 Major Facilitator Superfamily 8 321 6.2E-38 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_2459 86ac5d5aa2a8b256e99ce332366544a5 384 Gene3D G3DSA:1.20.1250.20 2 183 2.3E-29 T 15-10-2018 XDD1_2459 86ac5d5aa2a8b256e99ce332366544a5 384 SUPERFAMILY SSF103473 3 377 1.14E-57 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_2459 86ac5d5aa2a8b256e99ce332366544a5 384 Gene3D G3DSA:1.20.1250.20 193 384 1.6E-17 T 15-10-2018 XDD1_2010 bc00e6514c6a2443cd7ce8224072887a 527 SUPERFAMILY SSF53335 331 516 6.16E-17 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_2010 bc00e6514c6a2443cd7ce8224072887a 527 SUPERFAMILY SSF53474 2 220 1.28E-24 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2010 bc00e6514c6a2443cd7ce8224072887a 527 Gene3D G3DSA:3.40.50.150 302 523 2.1E-13 T 15-10-2018 XDD1_2010 bc00e6514c6a2443cd7ce8224072887a 527 Pfam PF12147 Putative methyltransferase 213 522 1.6E-136 T 15-10-2018 IPR022744 Methyltransferase domain, putative XDD1_2010 bc00e6514c6a2443cd7ce8224072887a 527 Pfam PF12146 Serine aminopeptidase, S33 2 205 7.6E-53 T 15-10-2018 IPR022742 Serine aminopeptidase, S33 XDD1_2010 bc00e6514c6a2443cd7ce8224072887a 527 Gene3D G3DSA:3.40.50.1820 1 222 3.0E-35 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1198 66d1c82f5daf4ee8af3970598f57f30f 358 Pfam PF00154 recA bacterial DNA recombination protein 9 270 5.7E-142 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XDD1_1198 66d1c82f5daf4ee8af3970598f57f30f 358 PRINTS PR00142 RecA protein signature 95 124 1.7E-84 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XDD1_1198 66d1c82f5daf4ee8af3970598f57f30f 358 PRINTS PR00142 RecA protein signature 212 240 1.7E-84 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XDD1_1198 66d1c82f5daf4ee8af3970598f57f30f 358 PRINTS PR00142 RecA protein signature 299 316 1.7E-84 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XDD1_1198 66d1c82f5daf4ee8af3970598f57f30f 358 PRINTS PR00142 RecA protein signature 245 274 1.7E-84 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XDD1_1198 66d1c82f5daf4ee8af3970598f57f30f 358 PRINTS PR00142 RecA protein signature 129 158 1.7E-84 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XDD1_1198 66d1c82f5daf4ee8af3970598f57f30f 358 PRINTS PR00142 RecA protein signature 167 196 1.7E-84 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XDD1_1198 66d1c82f5daf4ee8af3970598f57f30f 358 Gene3D G3DSA:3.30.250.10 271 329 2.8E-25 T 15-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal XDD1_1198 66d1c82f5daf4ee8af3970598f57f30f 358 ProSitePatterns PS00321 recA signature. 215 223 - T 15-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 XDD1_1198 66d1c82f5daf4ee8af3970598f57f30f 358 Hamap MF_00268 Protein RecA [recA]. 7 331 50.903 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XDD1_1198 66d1c82f5daf4ee8af3970598f57f30f 358 SUPERFAMILY SSF52540 6 269 9.16E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1198 66d1c82f5daf4ee8af3970598f57f30f 358 SUPERFAMILY SSF54752 271 326 9.55E-21 T 15-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal XDD1_1198 66d1c82f5daf4ee8af3970598f57f30f 358 SMART SM00382 59 230 6.0E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1198 66d1c82f5daf4ee8af3970598f57f30f 358 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 1.4E-171 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XDD1_1198 66d1c82f5daf4ee8af3970598f57f30f 358 Gene3D G3DSA:3.40.50.300 28 269 3.0E-82 T 15-10-2018 XDD1_0521 bfbed2a8a66aa826d6f51b520537337d 254 SMART SM00382 26 219 3.4E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0521 bfbed2a8a66aa826d6f51b520537337d 254 Gene3D G3DSA:3.40.50.300 1 253 3.6E-77 T 15-10-2018 XDD1_0521 bfbed2a8a66aa826d6f51b520537337d 254 Pfam PF00005 ABC transporter 17 171 1.5E-37 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_0521 bfbed2a8a66aa826d6f51b520537337d 254 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_0521 bfbed2a8a66aa826d6f51b520537337d 254 PIRSF PIRSF039085 1 247 6.0E-98 T 15-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 XDD1_0521 bfbed2a8a66aa826d6f51b520537337d 254 SUPERFAMILY SSF52540 1 240 1.95E-73 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1266 c75ef18fd428bc6b6e01cab2a07ebc54 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 3.0E-29 T 15-10-2018 IPR007454 Uncharacterised protein family UPF0250 XDD1_1266 c75ef18fd428bc6b6e01cab2a07ebc54 87 Gene3D G3DSA:3.30.70.260 1 87 2.0E-34 T 15-10-2018 XDD1_1266 c75ef18fd428bc6b6e01cab2a07ebc54 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 27.125 T 15-10-2018 IPR007454 Uncharacterised protein family UPF0250 XDD1_1266 c75ef18fd428bc6b6e01cab2a07ebc54 87 SUPERFAMILY SSF117991 1 87 2.49E-31 T 15-10-2018 IPR027471 YbeD-like domain superfamily XDD1_0851 0713a6ef43acbc431d63852cef07ab55 224 Gene3D G3DSA:1.10.10.10 120 206 2.2E-11 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0851 0713a6ef43acbc431d63852cef07ab55 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 197 7.1E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_0851 0713a6ef43acbc431d63852cef07ab55 224 SMART SM00421 144 201 2.3E-4 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_0851 0713a6ef43acbc431d63852cef07ab55 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 1.9E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_0851 0713a6ef43acbc431d63852cef07ab55 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 1.9E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_0851 0713a6ef43acbc431d63852cef07ab55 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 1.9E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_0851 0713a6ef43acbc431d63852cef07ab55 224 SUPERFAMILY SSF46894 138 203 1.16E-12 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XDD1_0851 0713a6ef43acbc431d63852cef07ab55 224 SUPERFAMILY SSF55785 8 117 1.38E-5 T 15-10-2018 IPR035965 PAS domain superfamily XDD1_0851 0713a6ef43acbc431d63852cef07ab55 224 Pfam PF08448 PAS fold 12 123 3.0E-11 T 15-10-2018 IPR013656 PAS fold-4 XDD1_0851 0713a6ef43acbc431d63852cef07ab55 224 Gene3D G3DSA:3.30.450.20 6 119 8.6E-8 T 15-10-2018 XDD1_2164 b47e6f570393dbfea90cff035ff858fe 120 SUPERFAMILY SSF51182 2 106 1.19E-21 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily XDD1_2164 b47e6f570393dbfea90cff035ff858fe 120 Pfam PF07883 Cupin domain 38 88 8.6E-10 T 15-10-2018 IPR013096 Cupin 2, conserved barrel XDD1_2164 b47e6f570393dbfea90cff035ff858fe 120 Gene3D G3DSA:2.60.120.10 1 100 8.9E-33 T 15-10-2018 IPR014710 RmlC-like jelly roll fold XDD1_2763 135982b2d4ea80d7af425c81126af3bb 178 Gene3D G3DSA:3.30.420.470 8 167 7.6E-12 T 15-10-2018 XDD1_2763 135982b2d4ea80d7af425c81126af3bb 178 Pfam PF13358 DDE superfamily endonuclease 15 149 9.8E-34 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_3787 135982b2d4ea80d7af425c81126af3bb 178 Gene3D G3DSA:3.30.420.470 8 167 7.6E-12 T 15-10-2018 XDD1_3787 135982b2d4ea80d7af425c81126af3bb 178 Pfam PF13358 DDE superfamily endonuclease 15 149 9.8E-34 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_1698 135982b2d4ea80d7af425c81126af3bb 178 Gene3D G3DSA:3.30.420.470 8 167 7.6E-12 T 15-10-2018 XDD1_1698 135982b2d4ea80d7af425c81126af3bb 178 Pfam PF13358 DDE superfamily endonuclease 15 149 9.8E-34 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2689 135982b2d4ea80d7af425c81126af3bb 178 Gene3D G3DSA:3.30.420.470 8 167 7.6E-12 T 15-10-2018 XDD1_2689 135982b2d4ea80d7af425c81126af3bb 178 Pfam PF13358 DDE superfamily endonuclease 15 149 9.8E-34 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0409 135982b2d4ea80d7af425c81126af3bb 178 Gene3D G3DSA:3.30.420.470 8 167 7.6E-12 T 15-10-2018 XDD1_0409 135982b2d4ea80d7af425c81126af3bb 178 Pfam PF13358 DDE superfamily endonuclease 15 149 9.8E-34 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2610 135982b2d4ea80d7af425c81126af3bb 178 Gene3D G3DSA:3.30.420.470 8 167 7.6E-12 T 15-10-2018 XDD1_2610 135982b2d4ea80d7af425c81126af3bb 178 Pfam PF13358 DDE superfamily endonuclease 15 149 9.8E-34 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2449 135982b2d4ea80d7af425c81126af3bb 178 Gene3D G3DSA:3.30.420.470 8 167 7.6E-12 T 15-10-2018 XDD1_2449 135982b2d4ea80d7af425c81126af3bb 178 Pfam PF13358 DDE superfamily endonuclease 15 149 9.8E-34 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_1003 135982b2d4ea80d7af425c81126af3bb 178 Gene3D G3DSA:3.30.420.470 8 167 7.6E-12 T 15-10-2018 XDD1_1003 135982b2d4ea80d7af425c81126af3bb 178 Pfam PF13358 DDE superfamily endonuclease 15 149 9.8E-34 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_1401 135982b2d4ea80d7af425c81126af3bb 178 Gene3D G3DSA:3.30.420.470 8 167 7.6E-12 T 15-10-2018 XDD1_1401 135982b2d4ea80d7af425c81126af3bb 178 Pfam PF13358 DDE superfamily endonuclease 15 149 9.8E-34 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2351 135982b2d4ea80d7af425c81126af3bb 178 Gene3D G3DSA:3.30.420.470 8 167 7.6E-12 T 15-10-2018 XDD1_2351 135982b2d4ea80d7af425c81126af3bb 178 Pfam PF13358 DDE superfamily endonuclease 15 149 9.8E-34 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0388 135982b2d4ea80d7af425c81126af3bb 178 Gene3D G3DSA:3.30.420.470 8 167 7.6E-12 T 15-10-2018 XDD1_0388 135982b2d4ea80d7af425c81126af3bb 178 Pfam PF13358 DDE superfamily endonuclease 15 149 9.8E-34 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0236 135982b2d4ea80d7af425c81126af3bb 178 Gene3D G3DSA:3.30.420.470 8 167 7.6E-12 T 15-10-2018 XDD1_0236 135982b2d4ea80d7af425c81126af3bb 178 Pfam PF13358 DDE superfamily endonuclease 15 149 9.8E-34 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_3885 135982b2d4ea80d7af425c81126af3bb 178 Gene3D G3DSA:3.30.420.470 8 167 7.6E-12 T 15-10-2018 XDD1_3885 135982b2d4ea80d7af425c81126af3bb 178 Pfam PF13358 DDE superfamily endonuclease 15 149 9.8E-34 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0193 d434a4a5a5d670e259936c184b5391e1 196 SUPERFAMILY SSF89562 24 181 4.58E-43 T 15-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily XDD1_0193 d434a4a5a5d670e259936c184b5391e1 196 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 24 184 1.7E-84 T 15-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 XDD1_0193 d434a4a5a5d670e259936c184b5391e1 196 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 24 184 46.584 T 15-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 XDD1_0193 d434a4a5a5d670e259936c184b5391e1 196 Pfam PF03737 Aldolase/RraA 29 175 2.0E-36 T 15-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein XDD1_0193 d434a4a5a5d670e259936c184b5391e1 196 TIGRFAM TIGR01935 NOT-MenG: RraA family 28 177 1.4E-62 T 15-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 XDD1_0193 d434a4a5a5d670e259936c184b5391e1 196 Gene3D G3DSA:3.50.30.40 24 184 1.3E-60 T 15-10-2018 XDD1_2942 ca8ed709adef94e2c6b01df5ffd3f2fa 355 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 48 5.6E-10 T 15-10-2018 XDD1_2942 ca8ed709adef94e2c6b01df5ffd3f2fa 355 SUPERFAMILY SSF53613 61 342 4.68E-57 T 15-10-2018 IPR029056 Ribokinase-like XDD1_2942 ca8ed709adef94e2c6b01df5ffd3f2fa 355 Gene3D G3DSA:3.40.1190.20 58 349 8.7E-75 T 15-10-2018 IPR029056 Ribokinase-like XDD1_2942 ca8ed709adef94e2c6b01df5ffd3f2fa 355 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 303 316 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 XDD1_2942 ca8ed709adef94e2c6b01df5ffd3f2fa 355 Pfam PF00294 pfkB family carbohydrate kinase 61 343 6.8E-61 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB XDD1_2942 ca8ed709adef94e2c6b01df5ffd3f2fa 355 Gene3D G3DSA:1.10.10.10 2 57 5.6E-11 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2942 ca8ed709adef94e2c6b01df5ffd3f2fa 355 SUPERFAMILY SSF46785 1 54 2.04E-9 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3927 23ba3474f54dce5a448d2f01c8bdbee5 404 Gene3D G3DSA:3.40.47.10 141 400 3.2E-152 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_3927 23ba3474f54dce5a448d2f01c8bdbee5 404 Pfam PF02803 Thiolase, C-terminal domain 279 402 2.1E-45 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 XDD1_3927 23ba3474f54dce5a448d2f01c8bdbee5 404 SUPERFAMILY SSF53901 4 278 8.05E-77 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_3927 23ba3474f54dce5a448d2f01c8bdbee5 404 Pfam PF00108 Thiolase, N-terminal domain 5 270 2.7E-72 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 XDD1_3927 23ba3474f54dce5a448d2f01c8bdbee5 404 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 401 7.7E-135 T 15-10-2018 IPR002155 Thiolase GO:0016747 XDD1_3927 23ba3474f54dce5a448d2f01c8bdbee5 404 Gene3D G3DSA:3.40.47.10 6 284 3.2E-152 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_3927 23ba3474f54dce5a448d2f01c8bdbee5 404 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 403 8.2E-215 T 15-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 XDD1_3927 23ba3474f54dce5a448d2f01c8bdbee5 404 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 15-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 XDD1_3927 23ba3474f54dce5a448d2f01c8bdbee5 404 ProSitePatterns PS00737 Thiolases signature 2. 349 365 - T 15-10-2018 IPR020613 Thiolase, conserved site GO:0016747 XDD1_3927 23ba3474f54dce5a448d2f01c8bdbee5 404 PIRSF PIRSF000429 1 404 1.8E-131 T 15-10-2018 IPR002155 Thiolase GO:0016747 XDD1_3927 23ba3474f54dce5a448d2f01c8bdbee5 404 ProSitePatterns PS00099 Thiolases active site. 384 397 - T 15-10-2018 IPR020610 Thiolase, active site GO:0016747 XDD1_3927 23ba3474f54dce5a448d2f01c8bdbee5 404 SUPERFAMILY SSF53901 279 402 7.61E-45 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_1521 fd5c5e09531fd11b8ba31f5151159f69 209 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 117 203 18.942 T 15-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 XDD1_1521 fd5c5e09531fd11b8ba31f5151159f69 209 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 2.6E-28 T 15-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 XDD1_1521 fd5c5e09531fd11b8ba31f5151159f69 209 Gene3D G3DSA:3.10.20.400 5 102 6.0E-31 T 15-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 XDD1_1521 fd5c5e09531fd11b8ba31f5151159f69 209 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 208 37.005 T 15-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 XDD1_1521 fd5c5e09531fd11b8ba31f5151159f69 209 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 3.0E-21 T 15-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 XDD1_1521 fd5c5e09531fd11b8ba31f5151159f69 209 Gene3D G3DSA:1.10.287.1080 117 208 9.6E-29 T 15-10-2018 XDD1_1521 fd5c5e09531fd11b8ba31f5151159f69 209 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 120 203 3.1E-30 T 15-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 XDD1_1521 fd5c5e09531fd11b8ba31f5151159f69 209 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 121 207 2.9E-17 T 15-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 XDD1_1521 fd5c5e09531fd11b8ba31f5151159f69 209 SUPERFAMILY SSF101386 119 207 5.98E-24 T 15-10-2018 XDD1_1521 fd5c5e09531fd11b8ba31f5151159f69 209 SUPERFAMILY SSF141734 14 126 2.88E-42 T 15-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 XDD1_0502 78a459ea1c7cdf0d236dc5b002cde113 154 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 94 2.0E-39 T 15-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal XDD1_0502 78a459ea1c7cdf0d236dc5b002cde113 154 Gene3D G3DSA:2.30.30.20 101 153 8.9E-25 T 15-10-2018 XDD1_0502 78a459ea1c7cdf0d236dc5b002cde113 154 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.803 T 15-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 XDD1_0502 78a459ea1c7cdf0d236dc5b002cde113 154 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 6.9E-63 T 15-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 XDD1_0502 78a459ea1c7cdf0d236dc5b002cde113 154 SUPERFAMILY SSF54893 2 100 6.02E-35 T 15-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily XDD1_0502 78a459ea1c7cdf0d236dc5b002cde113 154 SUPERFAMILY SSF57825 102 151 6.41E-16 T 15-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily XDD1_0502 78a459ea1c7cdf0d236dc5b002cde113 154 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 96 1.0E-29 T 15-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal XDD1_0502 78a459ea1c7cdf0d236dc5b002cde113 154 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 150 1.4E-19 T 15-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal XDD1_0502 78a459ea1c7cdf0d236dc5b002cde113 154 Gene3D G3DSA:3.30.70.140 1 100 2.5E-36 T 15-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily XDD1_3272 9eacab70e44bee2fa873959cedc3ee05 309 Gene3D G3DSA:3.40.50.880 1 301 6.3E-119 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_3272 9eacab70e44bee2fa873959cedc3ee05 309 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 40.683 T 15-10-2018 IPR033752 MetA family XDD1_3272 9eacab70e44bee2fa873959cedc3ee05 309 PIRSF PIRSF000450 1 308 5.4E-144 T 15-10-2018 IPR033752 MetA family XDD1_3272 9eacab70e44bee2fa873959cedc3ee05 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 4.4E-131 T 15-10-2018 IPR033752 MetA family XDD1_3272 9eacab70e44bee2fa873959cedc3ee05 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 5.0E-127 T 15-10-2018 XDD1_3272 9eacab70e44bee2fa873959cedc3ee05 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 9.8E-154 T 15-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 XDD1_3272 9eacab70e44bee2fa873959cedc3ee05 309 SUPERFAMILY SSF52317 17 297 1.86E-100 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_0413 7a578ce0e5b656679e87ca25fa520fa4 467 Gene3D G3DSA:3.40.640.10 59 325 1.4E-193 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_0413 7a578ce0e5b656679e87ca25fa520fa4 467 Pfam PF01212 Beta-eliminating lyase 47 430 9.0E-90 T 15-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 XDD1_0413 7a578ce0e5b656679e87ca25fa520fa4 467 Gene3D G3DSA:3.90.1150.10 7 459 1.4E-193 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_0413 7a578ce0e5b656679e87ca25fa520fa4 467 SUPERFAMILY SSF53383 4 464 3.35E-124 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_0413 7a578ce0e5b656679e87ca25fa520fa4 467 PIRSF PIRSF001386 1 465 1.8E-204 T 15-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 XDD1_2912 40e6ee4d6002f251572c515fc7e814c8 694 Pfam PF03406 Phage tail fibre repeat 169 210 2.7E-20 T 15-10-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 XDD1_2912 40e6ee4d6002f251572c515fc7e814c8 694 Pfam PF12571 Phage tail-collar fibre protein 1 149 4.9E-64 T 15-10-2018 IPR022225 Phage tail fibre protein XDD1_1179 8acd674f7a6b8f017ec64c8cb5c0458b 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 165 2.9E-20 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 XDD1_1179 8acd674f7a6b8f017ec64c8cb5c0458b 171 SUPERFAMILY SSF88659 107 166 4.8E-13 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XDD1_1179 8acd674f7a6b8f017ec64c8cb5c0458b 171 Gene3D G3DSA:1.10.1740.10 1 79 1.3E-7 T 15-10-2018 XDD1_1179 8acd674f7a6b8f017ec64c8cb5c0458b 171 Pfam PF04542 Sigma-70 region 2 17 82 3.9E-10 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 XDD1_1179 8acd674f7a6b8f017ec64c8cb5c0458b 171 SUPERFAMILY SSF88946 5 99 5.1E-12 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 XDD1_1179 8acd674f7a6b8f017ec64c8cb5c0458b 171 Pfam PF08281 Sigma-70, region 4 113 165 4.7E-16 T 15-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XDD1_1179 8acd674f7a6b8f017ec64c8cb5c0458b 171 Gene3D G3DSA:1.10.10.10 110 166 1.1E-12 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1201 b232ed9036c6f301f49b482c03d51294 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 XDD1_1201 b232ed9036c6f301f49b482c03d51294 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 15-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 XDD1_1201 b232ed9036c6f301f49b482c03d51294 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 1.3E-31 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 XDD1_1201 b232ed9036c6f301f49b482c03d51294 61 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 59 17.134 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 XDD1_1201 b232ed9036c6f301f49b482c03d51294 61 Gene3D G3DSA:3.30.70.1680 1 61 1.3E-31 T 15-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 XDD1_1201 b232ed9036c6f301f49b482c03d51294 61 Pfam PF02599 Global regulator protein family 1 52 2.5E-27 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 XDD1_2066 d787f7ad13dfb8b0ff1a3f9663238be9 341 SUPERFAMILY SSF52540 23 255 7.36E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2066 d787f7ad13dfb8b0ff1a3f9663238be9 341 Gene3D G3DSA:1.10.8.60 185 258 5.2E-30 T 15-10-2018 XDD1_2066 d787f7ad13dfb8b0ff1a3f9663238be9 341 Gene3D G3DSA:3.40.50.300 23 184 2.1E-39 T 15-10-2018 XDD1_2066 d787f7ad13dfb8b0ff1a3f9663238be9 341 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 2.7E-147 T 15-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 XDD1_2066 d787f7ad13dfb8b0ff1a3f9663238be9 341 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 3.9E-33 T 15-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 XDD1_2066 d787f7ad13dfb8b0ff1a3f9663238be9 341 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 3.7E-117 T 15-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 XDD1_2066 d787f7ad13dfb8b0ff1a3f9663238be9 341 SMART SM00382 54 181 1.5E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_2066 d787f7ad13dfb8b0ff1a3f9663238be9 341 Gene3D G3DSA:1.10.10.10 260 339 1.6E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2066 d787f7ad13dfb8b0ff1a3f9663238be9 341 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 341 182.641 T 15-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 XDD1_2066 d787f7ad13dfb8b0ff1a3f9663238be9 341 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 334 5.0E-37 T 15-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 XDD1_2066 d787f7ad13dfb8b0ff1a3f9663238be9 341 SUPERFAMILY SSF46785 260 330 4.28E-25 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1134 fe1fbbae9b2e6a64b0beb3f785836c71 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 2.0E-35 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 XDD1_1134 fe1fbbae9b2e6a64b0beb3f785836c71 90 SUPERFAMILY SSF111148 1 89 1.19E-39 T 15-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 XDD1_1134 fe1fbbae9b2e6a64b0beb3f785836c71 90 PIRSF PIRSF029827 1 90 7.4E-44 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 XDD1_1134 fe1fbbae9b2e6a64b0beb3f785836c71 90 Gene3D G3DSA:1.10.3880.10 1 90 4.5E-38 T 15-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 XDD1_1134 fe1fbbae9b2e6a64b0beb3f785836c71 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 4.6E-40 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 XDD1_1134 fe1fbbae9b2e6a64b0beb3f785836c71 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.178 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 XDD1_3542 c596f5b3fd41327fc1fe515494fe9d9b 153 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 13 151 6.3E-60 T 15-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 XDD1_3542 c596f5b3fd41327fc1fe515494fe9d9b 153 Gene3D G3DSA:1.10.1660.10 3 136 9.8E-32 T 15-10-2018 XDD1_3542 c596f5b3fd41327fc1fe515494fe9d9b 153 Pfam PF00376 MerR family regulatory protein 14 50 7.9E-13 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XDD1_3542 c596f5b3fd41327fc1fe515494fe9d9b 153 ProSitePatterns PS00552 MerR-type HTH domain signature. 16 38 - T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XDD1_3542 c596f5b3fd41327fc1fe515494fe9d9b 153 Pfam PF09278 MerR, DNA binding 55 120 4.2E-14 T 15-10-2018 IPR015358 Transcription regulator MerR, DNA binding XDD1_3542 c596f5b3fd41327fc1fe515494fe9d9b 153 SMART SM00422 13 81 1.4E-21 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XDD1_3542 c596f5b3fd41327fc1fe515494fe9d9b 153 SUPERFAMILY SSF46955 13 135 8.79E-27 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily XDD1_3542 c596f5b3fd41327fc1fe515494fe9d9b 153 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 48 68 2.1E-9 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XDD1_3542 c596f5b3fd41327fc1fe515494fe9d9b 153 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 25 38 2.1E-9 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XDD1_3542 c596f5b3fd41327fc1fe515494fe9d9b 153 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 25 2.1E-9 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XDD1_3348 3dbcc251ecfb9b2cf9f2d9d27a43ebba 307 Gene3D G3DSA:3.40.190.10 163 263 1.4E-62 T 15-10-2018 XDD1_3348 3dbcc251ecfb9b2cf9f2d9d27a43ebba 307 SUPERFAMILY SSF53850 93 296 4.89E-43 T 15-10-2018 XDD1_3348 3dbcc251ecfb9b2cf9f2d9d27a43ebba 307 SUPERFAMILY SSF46785 3 87 1.3E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3348 3dbcc251ecfb9b2cf9f2d9d27a43ebba 307 Gene3D G3DSA:3.40.190.10 103 289 1.4E-62 T 15-10-2018 XDD1_3348 3dbcc251ecfb9b2cf9f2d9d27a43ebba 307 Pfam PF03466 LysR substrate binding domain 91 293 1.1E-41 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_3348 3dbcc251ecfb9b2cf9f2d9d27a43ebba 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.1E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_3348 3dbcc251ecfb9b2cf9f2d9d27a43ebba 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.8E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_3348 3dbcc251ecfb9b2cf9f2d9d27a43ebba 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.8E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_3348 3dbcc251ecfb9b2cf9f2d9d27a43ebba 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.8E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_3348 3dbcc251ecfb9b2cf9f2d9d27a43ebba 307 Gene3D G3DSA:1.10.10.10 7 94 1.2E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1036 7afc983d9c0f5b6cb1de12d4eccbc133 649 SUPERFAMILY SSF52467 190 379 3.44E-42 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily XDD1_1036 7afc983d9c0f5b6cb1de12d4eccbc133 649 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 224 357 1.1E-32 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 XDD1_1036 7afc983d9c0f5b6cb1de12d4eccbc133 649 Gene3D G3DSA:3.40.50.1220 217 394 3.8E-37 T 15-10-2018 XDD1_1036 7afc983d9c0f5b6cb1de12d4eccbc133 649 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 480 499 - T 15-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 XDD1_1036 7afc983d9c0f5b6cb1de12d4eccbc133 649 SUPERFAMILY SSF52518 420 631 1.66E-53 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_1036 7afc983d9c0f5b6cb1de12d4eccbc133 649 Gene3D G3DSA:3.40.50.970 417 616 7.2E-48 T 15-10-2018 XDD1_1036 7afc983d9c0f5b6cb1de12d4eccbc133 649 SUPERFAMILY SSF52518 6 212 3.8E-33 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_1036 7afc983d9c0f5b6cb1de12d4eccbc133 649 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 198 1.3E-32 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 XDD1_1036 7afc983d9c0f5b6cb1de12d4eccbc133 649 Gene3D G3DSA:3.40.50.970 4 216 1.1E-34 T 15-10-2018 XDD1_1036 7afc983d9c0f5b6cb1de12d4eccbc133 649 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 444 603 4.0E-40 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 XDD1_1036 7afc983d9c0f5b6cb1de12d4eccbc133 649 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 10 645 1.5E-286 T 15-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 XDD1_3412 18e535ba6dd550add91b4c2953f8b5ef 139 Gene3D G3DSA:3.30.1130.10 22 138 1.8E-42 T 15-10-2018 XDD1_3412 18e535ba6dd550add91b4c2953f8b5ef 139 SUPERFAMILY SSF55620 22 136 7.78E-37 T 15-10-2018 XDD1_3412 18e535ba6dd550add91b4c2953f8b5ef 139 SMART SM00905 26 136 5.2E-46 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 XDD1_3412 18e535ba6dd550add91b4c2953f8b5ef 139 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 26 136 1.4E-27 T 15-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 XDD1_3412 18e535ba6dd550add91b4c2953f8b5ef 139 TIGRFAM TIGR00526 folB_dom: FolB domain 23 137 6.6E-36 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 XDD1_3412 18e535ba6dd550add91b4c2953f8b5ef 139 Pfam PF02152 Dihydroneopterin aldolase 26 135 7.1E-31 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 XDD1_2514 fe0a5877adb461216067cf7a9152e219 476 PIRSF PIRSF000977 2 476 3.3E-208 T 15-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 XDD1_2514 fe0a5877adb461216067cf7a9152e219 476 SMART SM00479 9 202 0.0039 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XDD1_2514 fe0a5877adb461216067cf7a9152e219 476 Gene3D G3DSA:2.30.30.450 213 353 2.5E-56 T 15-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily XDD1_2514 fe0a5877adb461216067cf7a9152e219 476 Gene3D G3DSA:3.30.420.10 1 200 2.7E-72 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_2514 fe0a5877adb461216067cf7a9152e219 476 Pfam PF00929 Exonuclease 12 191 3.2E-27 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XDD1_2514 fe0a5877adb461216067cf7a9152e219 476 SUPERFAMILY SSF53098 9 474 5.84E-136 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_2514 fe0a5877adb461216067cf7a9152e219 476 Pfam PF08411 Exonuclease C-terminal 211 471 1.1E-105 T 15-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 XDD1_2514 fe0a5877adb461216067cf7a9152e219 476 Gene3D G3DSA:1.20.1280.70 359 420 1.6E-28 T 15-10-2018 XDD1_3007 fef593485c159a537455f97caf15ecb4 256 SUPERFAMILY SSF160950 10 256 1.27E-85 T 15-10-2018 IPR036268 ZapD domain superfamily XDD1_3007 fef593485c159a537455f97caf15ecb4 256 Gene3D G3DSA:1.10.3900.10 20 186 3.2E-80 T 15-10-2018 XDD1_3007 fef593485c159a537455f97caf15ecb4 256 Hamap MF_01092 Cell division protein ZapD [zapD]. 11 256 31.525 T 15-10-2018 IPR009777 Cell division protein ZapD XDD1_3007 fef593485c159a537455f97caf15ecb4 256 Pfam PF07072 Cell division protein 26 234 2.7E-73 T 15-10-2018 IPR009777 Cell division protein ZapD XDD1_3007 fef593485c159a537455f97caf15ecb4 256 Gene3D G3DSA:2.60.440.10 13 256 3.2E-80 T 15-10-2018 IPR027462 Z ring-associated protein D, C-terminal XDD1_2885 dbe6c29a59a54dca0655a98cf35d97e8 628 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 57 1.2E-22 T 15-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 XDD1_2885 dbe6c29a59a54dca0655a98cf35d97e8 628 Gene3D G3DSA:3.40.50.12780 30 494 1.0E-95 T 15-10-2018 XDD1_2885 dbe6c29a59a54dca0655a98cf35d97e8 628 Pfam PF00501 AMP-binding enzyme 59 500 2.7E-80 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2885 dbe6c29a59a54dca0655a98cf35d97e8 628 SUPERFAMILY SSF56801 3 604 9.55E-160 T 15-10-2018 XDD1_2885 dbe6c29a59a54dca0655a98cf35d97e8 628 Pfam PF13193 AMP-binding enzyme C-terminal domain 509 592 2.2E-23 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2885 dbe6c29a59a54dca0655a98cf35d97e8 628 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 1 627 0.0 T 15-10-2018 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747 XDD1_2885 dbe6c29a59a54dca0655a98cf35d97e8 628 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2885 dbe6c29a59a54dca0655a98cf35d97e8 628 Gene3D G3DSA:3.30.300.30 496 628 9.1E-26 T 15-10-2018 XDD1_0526 0c06793c8035f86f0014e38bc597e803 411 Pfam PF07690 Major Facilitator Superfamily 216 386 3.3E-9 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0526 0c06793c8035f86f0014e38bc597e803 411 Gene3D G3DSA:1.20.1250.20 1 183 2.5E-6 T 15-10-2018 XDD1_0526 0c06793c8035f86f0014e38bc597e803 411 SUPERFAMILY SSF103473 22 387 2.22E-24 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0526 0c06793c8035f86f0014e38bc597e803 411 Gene3D G3DSA:1.20.1250.20 210 407 2.6E-10 T 15-10-2018 XDD1_3184 9de6f6395d84658a916e0ca16c5d4fc9 180 Pfam PF12724 Flavodoxin domain 4 152 1.1E-52 T 15-10-2018 IPR026816 Flavodoxin domain XDD1_3184 9de6f6395d84658a916e0ca16c5d4fc9 180 SUPERFAMILY SSF52218 1 167 1.42E-29 T 15-10-2018 IPR029039 Flavoprotein-like superfamily XDD1_3184 9de6f6395d84658a916e0ca16c5d4fc9 180 Gene3D G3DSA:3.40.50.360 4 112 7.4E-12 T 15-10-2018 IPR029039 Flavoprotein-like superfamily XDD1_3005 cffabab8f2c513ede3742a9d88faee4f 399 Gene3D G3DSA:1.20.81.30 251 360 3.2E-17 T 15-10-2018 XDD1_3005 cffabab8f2c513ede3742a9d88faee4f 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 9.4E-14 T 15-10-2018 IPR003004 GspF/PilC family XDD1_3005 cffabab8f2c513ede3742a9d88faee4f 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 159 187 9.4E-14 T 15-10-2018 IPR003004 GspF/PilC family XDD1_3005 cffabab8f2c513ede3742a9d88faee4f 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 9.4E-14 T 15-10-2018 IPR003004 GspF/PilC family XDD1_3005 cffabab8f2c513ede3742a9d88faee4f 399 Gene3D G3DSA:1.20.81.30 54 166 1.4E-25 T 15-10-2018 XDD1_3005 cffabab8f2c513ede3742a9d88faee4f 399 Pfam PF00482 Type II secretion system (T2SS), protein F 64 187 2.1E-27 T 15-10-2018 IPR018076 Type II secretion system F domain XDD1_3005 cffabab8f2c513ede3742a9d88faee4f 399 Pfam PF00482 Type II secretion system (T2SS), protein F 272 390 6.3E-24 T 15-10-2018 IPR018076 Type II secretion system F domain XDD1_3154 716a3c58f969ca612f7ad8cad56fc6ee 205 Gene3D G3DSA:1.10.3290.10 6 205 3.9E-50 T 15-10-2018 IPR036597 Fido-like domain superfamily XDD1_3154 716a3c58f969ca612f7ad8cad56fc6ee 205 Pfam PF02661 Fic/DOC family 59 158 1.5E-21 T 15-10-2018 IPR003812 Fido domain XDD1_3154 716a3c58f969ca612f7ad8cad56fc6ee 205 SUPERFAMILY SSF140931 35 202 3.27E-38 T 15-10-2018 IPR036597 Fido-like domain superfamily XDD1_3329 55d2108317c3530b42b223d9edf944a1 486 PRINTS PR00313 NodO calcium binding signature 376 384 6.2E-12 T 15-10-2018 XDD1_3329 55d2108317c3530b42b223d9edf944a1 486 PRINTS PR00313 NodO calcium binding signature 385 394 6.2E-12 T 15-10-2018 XDD1_3329 55d2108317c3530b42b223d9edf944a1 486 PRINTS PR00313 NodO calcium binding signature 367 375 6.2E-12 T 15-10-2018 XDD1_3329 55d2108317c3530b42b223d9edf944a1 486 PRINTS PR00313 NodO calcium binding signature 346 357 6.2E-12 T 15-10-2018 XDD1_3329 55d2108317c3530b42b223d9edf944a1 486 Pfam PF08548 Peptidase M10 serralysin C terminal 264 486 2.0E-86 T 15-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 XDD1_3329 55d2108317c3530b42b223d9edf944a1 486 Pfam PF00413 Matrixin 104 206 1.0E-8 T 15-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 XDD1_3329 55d2108317c3530b42b223d9edf944a1 486 SMART SM00235 85 248 1.0E-9 T 15-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 XDD1_3329 55d2108317c3530b42b223d9edf944a1 486 Gene3D G3DSA:3.40.390.10 44 271 8.3E-168 T 15-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 XDD1_3329 55d2108317c3530b42b223d9edf944a1 486 PIRSF PIRSF001205 1 486 1.4E-209 T 15-10-2018 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 XDD1_3329 55d2108317c3530b42b223d9edf944a1 486 SUPERFAMILY SSF55486 19 262 1.02E-50 T 15-10-2018 XDD1_3329 55d2108317c3530b42b223d9edf944a1 486 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 372 390 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XDD1_3329 55d2108317c3530b42b223d9edf944a1 486 SUPERFAMILY SSF51120 266 483 7.46E-44 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XDD1_3329 55d2108317c3530b42b223d9edf944a1 486 Gene3D G3DSA:2.150.10.10 272 478 8.3E-168 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XDD1_1406 502e7ebe7c9534ac50a0a521347712f4 196 Gene3D G3DSA:1.10.357.10 1 195 3.7E-51 T 15-10-2018 XDD1_1406 502e7ebe7c9534ac50a0a521347712f4 196 SUPERFAMILY SSF46689 2 83 4.21E-19 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1406 502e7ebe7c9534ac50a0a521347712f4 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 7.9E-8 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_1406 502e7ebe7c9534ac50a0a521347712f4 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 7.9E-8 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_1406 502e7ebe7c9534ac50a0a521347712f4 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 3.2E-14 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_3597 1a94fb4bfd22c27fd15ceb945605888f 537 Gene3D G3DSA:2.40.100.10 410 530 2.9E-37 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily XDD1_3597 1a94fb4bfd22c27fd15ceb945605888f 537 SMART SM00796 1 191 3.5E-79 T 15-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D XDD1_3597 1a94fb4bfd22c27fd15ceb945605888f 537 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 2 191 1.2E-58 T 15-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D XDD1_3597 1a94fb4bfd22c27fd15ceb945605888f 537 SMART SM00797 255 536 9.8E-96 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B XDD1_3597 1a94fb4bfd22c27fd15ceb945605888f 537 SUPERFAMILY SSF50891 413 525 3.34E-15 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily XDD1_3597 1a94fb4bfd22c27fd15ceb945605888f 537 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 257 522 1.5E-74 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B XDD1_3597 1a94fb4bfd22c27fd15ceb945605888f 537 Gene3D G3DSA:2.40.100.10 75 203 6.5E-51 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily XDD1_3597 1a94fb4bfd22c27fd15ceb945605888f 537 Gene3D G3DSA:3.30.1360.40 3 74 1.8E-9 T 15-10-2018 XDD1_3597 1a94fb4bfd22c27fd15ceb945605888f 537 SUPERFAMILY SSF50891 81 201 9.48E-38 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily XDD1_3597 1a94fb4bfd22c27fd15ceb945605888f 537 SUPERFAMILY SSF160467 2 84 2.48E-10 T 15-10-2018 XDD1_3597 1a94fb4bfd22c27fd15ceb945605888f 537 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 234 526 4.4E-74 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B XDD1_0569 c232cb457fec7c46fecb28daefce8fe5 578 Pfam PF00005 ABC transporter 21 153 1.4E-19 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_0569 c232cb457fec7c46fecb28daefce8fe5 578 SUPERFAMILY SSF52540 318 503 2.34E-33 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0569 c232cb457fec7c46fecb28daefce8fe5 578 ProSitePatterns PS00211 ABC transporters family signature. 125 139 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_0569 c232cb457fec7c46fecb28daefce8fe5 578 Pfam PF00005 ABC transporter 320 446 5.5E-15 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_0569 c232cb457fec7c46fecb28daefce8fe5 578 SMART SM00382 324 491 1.5E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0569 c232cb457fec7c46fecb28daefce8fe5 578 SMART SM00382 29 198 1.1E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0569 c232cb457fec7c46fecb28daefce8fe5 578 SUPERFAMILY SSF52540 3 203 5.8E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0569 c232cb457fec7c46fecb28daefce8fe5 578 Gene3D G3DSA:3.40.50.300 1 237 6.4E-48 T 15-10-2018 XDD1_0569 c232cb457fec7c46fecb28daefce8fe5 578 Gene3D G3DSA:3.40.50.300 290 508 8.9E-39 T 15-10-2018 XDD1_1881 d3e77f4eb4209a1f34866bbe4bb93002 531 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 472 519 7.1E-28 T 15-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 XDD1_1881 d3e77f4eb4209a1f34866bbe4bb93002 531 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 236 249 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 XDD1_1881 d3e77f4eb4209a1f34866bbe4bb93002 531 SUPERFAMILY SSF52540 212 453 1.39E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1881 d3e77f4eb4209a1f34866bbe4bb93002 531 SUPERFAMILY SSF55785 78 132 3.84E-9 T 15-10-2018 IPR035965 PAS domain superfamily XDD1_1881 d3e77f4eb4209a1f34866bbe4bb93002 531 Gene3D G3DSA:1.10.10.60 461 520 2.3E-26 T 15-10-2018 XDD1_1881 d3e77f4eb4209a1f34866bbe4bb93002 531 Gene3D G3DSA:1.10.8.60 384 460 1.8E-20 T 15-10-2018 XDD1_1881 d3e77f4eb4209a1f34866bbe4bb93002 531 SMART SM00382 232 376 6.4E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1881 d3e77f4eb4209a1f34866bbe4bb93002 531 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 84 130 1.5E-8 T 15-10-2018 IPR000014 PAS domain XDD1_1881 d3e77f4eb4209a1f34866bbe4bb93002 531 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 425 434 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site XDD1_1881 d3e77f4eb4209a1f34866bbe4bb93002 531 SMART SM00091 80 146 3.6E-7 T 15-10-2018 IPR000014 PAS domain XDD1_1881 d3e77f4eb4209a1f34866bbe4bb93002 531 Pfam PF00158 Sigma-54 interaction domain 212 378 4.0E-62 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 XDD1_1881 d3e77f4eb4209a1f34866bbe4bb93002 531 Pfam PF00989 PAS fold 84 154 2.7E-8 T 15-10-2018 IPR013767 PAS fold GO:0006355 XDD1_1881 d3e77f4eb4209a1f34866bbe4bb93002 531 Gene3D G3DSA:3.30.70.260 1 81 1.0E-25 T 15-10-2018 XDD1_1881 d3e77f4eb4209a1f34866bbe4bb93002 531 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 298 313 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 XDD1_1881 d3e77f4eb4209a1f34866bbe4bb93002 531 SUPERFAMILY SSF46689 467 519 1.37E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1881 d3e77f4eb4209a1f34866bbe4bb93002 531 Gene3D G3DSA:3.40.50.300 202 383 5.6E-61 T 15-10-2018 XDD1_1881 d3e77f4eb4209a1f34866bbe4bb93002 531 Gene3D G3DSA:3.30.450.20 83 186 4.7E-24 T 15-10-2018 XDD1_3416 596cc5ff95304efbb61a7ff79c96a072 582 Pfam PF08278 DNA primase DnaG DnaB-binding 452 573 5.1E-33 T 15-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 XDD1_3416 596cc5ff95304efbb61a7ff79c96a072 582 SUPERFAMILY SSF56731 116 427 1.05E-114 T 15-10-2018 XDD1_3416 596cc5ff95304efbb61a7ff79c96a072 582 SMART SM00766 451 576 1.7E-40 T 15-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 XDD1_3416 596cc5ff95304efbb61a7ff79c96a072 582 Pfam PF13155 Toprim-like 263 348 4.1E-14 T 15-10-2018 XDD1_3416 596cc5ff95304efbb61a7ff79c96a072 582 TIGRFAM TIGR01391 dnaG: DNA primase 4 418 6.0E-151 T 15-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 XDD1_3416 596cc5ff95304efbb61a7ff79c96a072 582 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 2.0E-44 T 15-10-2018 IPR013264 DNA primase, catalytic core, N-terminal XDD1_3416 596cc5ff95304efbb61a7ff79c96a072 582 Gene3D G3DSA:1.10.860.10 436 582 4.4E-50 T 15-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal XDD1_3416 596cc5ff95304efbb61a7ff79c96a072 582 SUPERFAMILY SSF117023 448 575 7.32E-41 T 15-10-2018 XDD1_3416 596cc5ff95304efbb61a7ff79c96a072 582 SMART SM00493 259 330 9.5E-21 T 15-10-2018 IPR006171 TOPRIM domain XDD1_3416 596cc5ff95304efbb61a7ff79c96a072 582 Gene3D G3DSA:3.40.1360.10 241 367 1.5E-44 T 15-10-2018 XDD1_3416 596cc5ff95304efbb61a7ff79c96a072 582 Hamap MF_00974 DNA primase [dnaG]. 4 577 29.854 T 15-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 XDD1_3416 596cc5ff95304efbb61a7ff79c96a072 582 Gene3D G3DSA:3.90.980.10 115 240 2.5E-48 T 15-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily XDD1_3416 596cc5ff95304efbb61a7ff79c96a072 582 Gene3D G3DSA:3.90.580.10 1 101 4.4E-37 T 15-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 XDD1_3416 596cc5ff95304efbb61a7ff79c96a072 582 Gene3D G3DSA:1.20.50.20 368 426 6.5E-24 T 15-10-2018 XDD1_3416 596cc5ff95304efbb61a7ff79c96a072 582 Pfam PF01807 CHC2 zinc finger 6 100 4.3E-39 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XDD1_3416 596cc5ff95304efbb61a7ff79c96a072 582 SMART SM00400 36 90 1.1E-37 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XDD1_3416 596cc5ff95304efbb61a7ff79c96a072 582 Pfam PF10410 DnaB-helicase binding domain of primase 369 422 6.5E-11 T 15-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 XDD1_3416 596cc5ff95304efbb61a7ff79c96a072 582 SUPERFAMILY SSF57783 4 100 4.93E-36 T 15-10-2018 XDD1_0136 217ff72b38a39d11ff95d20ee914c354 354 SUPERFAMILY SSF53756 9 353 3.35E-83 T 15-10-2018 XDD1_0136 217ff72b38a39d11ff95d20ee914c354 354 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 84 324 1.9E-50 T 15-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 XDD1_0136 217ff72b38a39d11ff95d20ee914c354 354 Gene3D G3DSA:3.40.50.2000 173 354 2.2E-40 T 15-10-2018 XDD1_0136 217ff72b38a39d11ff95d20ee914c354 354 Gene3D G3DSA:3.40.50.2000 3 168 9.0E-38 T 15-10-2018 XDD1_0136 217ff72b38a39d11ff95d20ee914c354 354 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 10 354 5.4E-150 T 15-10-2018 IPR011916 Lipopolysaccharide heptosyltransferase III, putative XDD1_1763 e5a2344d90effc5f18fbfde957a06633 1382 SMART SM00634 826 916 6.4E-7 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain XDD1_1763 e5a2344d90effc5f18fbfde957a06633 1382 SMART SM00634 602 701 0.097 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain XDD1_1763 e5a2344d90effc5f18fbfde957a06633 1382 Gene3D G3DSA:2.60.40.10 600 707 6.9E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_1763 e5a2344d90effc5f18fbfde957a06633 1382 Gene3D G3DSA:2.60.40.10 720 821 2.5E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_1763 e5a2344d90effc5f18fbfde957a06633 1382 Gene3D G3DSA:2.60.40.10 825 920 3.6E-15 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_1763 e5a2344d90effc5f18fbfde957a06633 1382 Gene3D G3DSA:2.40.160.160 128 373 4.3E-102 T 15-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily XDD1_1763 e5a2344d90effc5f18fbfde957a06633 1382 PRINTS PR01369 Intimin signature 218 233 7.3E-7 T 15-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 XDD1_1763 e5a2344d90effc5f18fbfde957a06633 1382 PRINTS PR01369 Intimin signature 314 333 7.3E-7 T 15-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 XDD1_1763 e5a2344d90effc5f18fbfde957a06633 1382 PRINTS PR01369 Intimin signature 246 265 7.3E-7 T 15-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 XDD1_1763 e5a2344d90effc5f18fbfde957a06633 1382 SUPERFAMILY SSF49373 728 800 5.89E-5 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments XDD1_1763 e5a2344d90effc5f18fbfde957a06633 1382 SUPERFAMILY SSF49373 841 915 2.94E-13 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments XDD1_1763 e5a2344d90effc5f18fbfde957a06633 1382 Pfam PF11924 Inverse autotransporter, beta-domain 92 366 4.7E-107 T 15-10-2018 IPR024519 Inverse autotransporter, beta-domain XDD1_1763 e5a2344d90effc5f18fbfde957a06633 1382 Pfam PF02369 Bacterial Ig-like domain (group 1) 839 912 3.9E-10 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain XDD1_1763 e5a2344d90effc5f18fbfde957a06633 1382 SUPERFAMILY SSF49373 600 690 1.36E-8 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments XDD1_0826 1d9334a5e693cc59e872b93becde9e55 446 Pfam PF05525 Branched-chain amino acid transport protein 7 429 2.8E-154 T 15-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 XDD1_0826 1d9334a5e693cc59e872b93becde9e55 446 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 416 8.3E-153 T 15-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 XDD1_3164 8eb8ec119a52f3e9748ebe9722c5e182 266 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 19 257 40.973 T 15-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 XDD1_3164 8eb8ec119a52f3e9748ebe9722c5e182 266 Gene3D G3DSA:3.90.550.10 14 265 1.1E-68 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_3164 8eb8ec119a52f3e9748ebe9722c5e182 266 SUPERFAMILY SSF53448 20 258 6.5E-57 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_3164 8eb8ec119a52f3e9748ebe9722c5e182 266 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 22 257 5.2E-66 T 15-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 XDD1_3164 8eb8ec119a52f3e9748ebe9722c5e182 266 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 20 258 3.5E-73 T 15-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 XDD1_3164 8eb8ec119a52f3e9748ebe9722c5e182 266 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 119 126 - T 15-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 XDD1_3317 18adba8cee74819f7fbafcc7b7050e77 567 Pfam PF09129 Cholesterol oxidase, substrate-binding 242 562 5.4E-135 T 15-10-2018 IPR015213 Cholesterol oxidase, substrate-binding XDD1_3317 18adba8cee74819f7fbafcc7b7050e77 567 Gene3D G3DSA:1.10.45.10 514 563 3.6E-13 T 15-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 XDD1_3317 18adba8cee74819f7fbafcc7b7050e77 567 Gene3D G3DSA:3.30.43.10 36 110 6.1E-23 T 15-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 XDD1_3317 18adba8cee74819f7fbafcc7b7050e77 567 Gene3D G3DSA:3.40.462.10 239 513 2.1E-112 T 15-10-2018 IPR016170 Cytokinin dehydrogenase, C-terminal domain superfamily KEGG: 00908+1.5.99.12 XDD1_3317 18adba8cee74819f7fbafcc7b7050e77 567 SUPERFAMILY SSF56176 28 203 1.21E-27 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XDD1_3317 18adba8cee74819f7fbafcc7b7050e77 567 SUPERFAMILY SSF55103 241 562 1.57E-120 T 15-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 XDD1_3317 18adba8cee74819f7fbafcc7b7050e77 567 Gene3D G3DSA:3.30.465.10 111 238 4.8E-50 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 XDD1_3317 18adba8cee74819f7fbafcc7b7050e77 567 Pfam PF01565 FAD binding domain 56 171 6.5E-13 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 XDD1_2505 f7c5db9cd63dad129846647f58204e40 317 SUPERFAMILY SSF53901 4 317 1.39E-70 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2505 f7c5db9cd63dad129846647f58204e40 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 2.9E-32 T 15-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XDD1_2505 f7c5db9cd63dad129846647f58204e40 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 7.6E-36 T 15-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XDD1_2505 f7c5db9cd63dad129846647f58204e40 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 1.5E-144 T 15-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XDD1_2505 f7c5db9cd63dad129846647f58204e40 317 Gene3D G3DSA:3.40.47.10 1 317 8.4E-125 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2505 f7c5db9cd63dad129846647f58204e40 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 70.851 T 15-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XDD1_2701 278736beaa83af645993bec736d47e35 672 Gene3D G3DSA:2.20.70.80 391 431 6.9E-19 T 15-10-2018 XDD1_2701 278736beaa83af645993bec736d47e35 672 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 597 670 1.4E-15 T 15-10-2018 IPR001357 BRCT domain XDD1_2701 278736beaa83af645993bec736d47e35 672 Gene3D G3DSA:1.10.150.20 506 586 1.8E-27 T 15-10-2018 XDD1_2701 278736beaa83af645993bec736d47e35 672 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 1.8E-10 T 15-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 XDD1_2701 278736beaa83af645993bec736d47e35 672 Gene3D G3DSA:1.10.150.20 432 505 4.6E-31 T 15-10-2018 XDD1_2701 278736beaa83af645993bec736d47e35 672 Gene3D G3DSA:3.40.50.10190 587 671 1.7E-27 T 15-10-2018 IPR036420 BRCT domain superfamily XDD1_2701 278736beaa83af645993bec736d47e35 672 SMART SM00292 596 671 4.6E-15 T 15-10-2018 IPR001357 BRCT domain XDD1_2701 278736beaa83af645993bec736d47e35 672 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 15-10-2018 IPR018239 NAD-dependent DNA ligase, active site XDD1_2701 278736beaa83af645993bec736d47e35 672 Gene3D G3DSA:1.10.287.610 1 69 4.4E-31 T 15-10-2018 XDD1_2701 278736beaa83af645993bec736d47e35 672 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 15-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site XDD1_2701 278736beaa83af645993bec736d47e35 672 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 666 9.6E-275 T 15-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 XDD1_2701 278736beaa83af645993bec736d47e35 672 SUPERFAMILY SSF47781 404 578 1.04E-60 T 15-10-2018 IPR010994 RuvA domain 2-like XDD1_2701 278736beaa83af645993bec736d47e35 672 Gene3D G3DSA:3.30.1490.70 78 316 1.7E-103 T 15-10-2018 XDD1_2701 278736beaa83af645993bec736d47e35 672 SUPERFAMILY SSF50249 318 399 6.0E-29 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_2701 278736beaa83af645993bec736d47e35 672 SUPERFAMILY SSF56091 3 316 1.24E-124 T 15-10-2018 XDD1_2701 278736beaa83af645993bec736d47e35 672 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 318 6.2E-139 T 15-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 XDD1_2701 278736beaa83af645993bec736d47e35 672 SUPERFAMILY SSF52113 597 670 8.01E-20 T 15-10-2018 IPR036420 BRCT domain superfamily XDD1_2701 278736beaa83af645993bec736d47e35 672 Hamap MF_01588 DNA ligase [ligA]. 2 670 54.256 T 15-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 XDD1_2701 278736beaa83af645993bec736d47e35 672 PIRSF PIRSF001604 1 672 2.5E-257 T 15-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 XDD1_2701 278736beaa83af645993bec736d47e35 672 SMART SM00532 3 448 5.7E-286 T 15-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 XDD1_2701 278736beaa83af645993bec736d47e35 672 Gene3D G3DSA:3.30.470.30 70 253 1.7E-103 T 15-10-2018 XDD1_2701 278736beaa83af645993bec736d47e35 672 Gene3D G3DSA:2.40.50.140 317 390 1.4E-34 T 15-10-2018 XDD1_2701 278736beaa83af645993bec736d47e35 672 Pfam PF14520 Helix-hairpin-helix domain 446 502 5.4E-7 T 15-10-2018 XDD1_2701 278736beaa83af645993bec736d47e35 672 Pfam PF12826 Helix-hairpin-helix motif 510 573 1.0E-22 T 15-10-2018 XDD1_2701 278736beaa83af645993bec736d47e35 672 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 396 1.7E-35 T 15-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 XDD1_2701 278736beaa83af645993bec736d47e35 672 SMART SM00278 480 499 0.88 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XDD1_2701 278736beaa83af645993bec736d47e35 672 SMART SM00278 446 465 2.4 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XDD1_2701 278736beaa83af645993bec736d47e35 672 SMART SM00278 512 531 280.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XDD1_2701 278736beaa83af645993bec736d47e35 672 SMART SM00278 544 563 280.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XDD1_3463 66e71777c2414183611f44ce9e7edc09 82 Hamap MF_01217 Acyl carrier protein [acpP]. 5 79 14.251 T 15-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 XDD1_3463 66e71777c2414183611f44ce9e7edc09 82 Gene3D G3DSA:1.10.1200.10 1 77 4.3E-20 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_3463 66e71777c2414183611f44ce9e7edc09 82 Pfam PF00550 Phosphopantetheine attachment site 9 75 4.4E-12 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_3463 66e71777c2414183611f44ce9e7edc09 82 SUPERFAMILY SSF47336 2 80 4.84E-19 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_3689 5df90ef28e9d1a94613469a522c30334 339 Gene3D G3DSA:3.40.50.2300 129 265 5.3E-107 T 15-10-2018 XDD1_3689 5df90ef28e9d1a94613469a522c30334 339 Pfam PF13407 Periplasmic binding protein domain 29 284 3.5E-54 T 15-10-2018 IPR025997 Periplasmic binding protein XDD1_3689 5df90ef28e9d1a94613469a522c30334 339 Gene3D G3DSA:3.40.50.2300 29 299 5.3E-107 T 15-10-2018 XDD1_3689 5df90ef28e9d1a94613469a522c30334 339 SUPERFAMILY SSF53822 26 339 1.02E-82 T 15-10-2018 IPR028082 Periplasmic binding protein-like I XDD1_2421 05dc5ca5c14a37e220762a5581c4ec42 373 Pfam PF01594 AI-2E family transporter 19 345 1.6E-75 T 15-10-2018 IPR002549 Transmembrane protein TqsA-like XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Pfam PF13193 AMP-binding enzyme C-terminal domain 2074 2149 5.7E-13 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Pfam PF13193 AMP-binding enzyme C-terminal domain 4218 4289 5.2E-12 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Pfam PF13193 AMP-binding enzyme C-terminal domain 946 1031 7.2E-10 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Pfam PF13193 AMP-binding enzyme C-terminal domain 3151 3226 4.9E-12 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:3.30.559.30 2446 2691 4.4E-153 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SUPERFAMILY SSF52777 1174 1368 1.33E-32 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Pfam PF00501 AMP-binding enzyme 2729 3143 1.3E-102 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Pfam PF00501 AMP-binding enzyme 3808 4210 1.3E-105 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Pfam PF00501 AMP-binding enzyme 511 938 1.5E-99 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Pfam PF00501 AMP-binding enzyme 1648 2066 3.1E-98 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:3.30.300.30 2061 2165 1.5E-34 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SUPERFAMILY SSF56801 2695 3266 1.1E-159 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SUPERFAMILY SSF56801 3768 4329 8.77E-163 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:3.30.559.30 3523 3766 2.2E-155 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Pfam PF00975 Thioesterase domain 4681 4922 1.6E-29 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Pfam PF00975 Thioesterase domain 4405 4654 1.4E-29 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1808 1819 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:3.40.50.1820 4392 4659 2.4E-54 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3277 3292 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SUPERFAMILY SSF56801 1605 2189 1.7E-156 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:3.30.559.30 230 475 2.2E-156 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2877 2888 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SUPERFAMILY SSF52777 2452 2713 7.56E-65 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:3.30.559.10 3339 3713 2.2E-155 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:3.30.559.10 46 420 2.2E-156 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:3.30.559.30 1354 1623 2.0E-85 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:3.30.300.30 3138 3239 4.6E-37 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:3.30.300.30 932 1045 3.5E-33 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SUPERFAMILY SSF52777 234 498 3.56E-64 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SUPERFAMILY SSF52777 41 246 1.11E-49 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SUPERFAMILY SSF47336 3245 3318 2.88E-19 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:3.30.300.30 4204 4302 1.5E-32 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SUPERFAMILY SSF47336 4309 4379 1.06E-18 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:3.40.50.1820 4670 4938 3.0E-53 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SUPERFAMILY SSF52777 3527 3790 1.07E-63 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SUPERFAMILY SSF56801 472 1071 1.44E-154 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SMART SM00823 Phosphopantetheine attachment site 3253 3322 6.1E-4 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SMART SM00823 Phosphopantetheine attachment site 4316 4384 0.025 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SMART SM00823 Phosphopantetheine attachment site 2176 2245 0.0034 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SMART SM00823 Phosphopantetheine attachment site 1058 1126 0.77 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Pfam PF00668 Condensation domain 3338 3784 1.3E-106 T 15-10-2018 IPR001242 Condensation domain XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Pfam PF00668 Condensation domain 45 491 4.5E-112 T 15-10-2018 IPR001242 Condensation domain XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Pfam PF00668 Condensation domain 1175 1627 3.1E-54 T 15-10-2018 IPR001242 Condensation domain XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Pfam PF00668 Condensation domain 2261 2706 1.2E-112 T 15-10-2018 IPR001242 Condensation domain XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SUPERFAMILY SSF52777 3333 3539 4.34E-50 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:3.30.559.10 1181 1557 2.0E-85 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:3.40.50.12780 2711 3137 2.2E-140 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 ProSitePatterns PS00455 Putative AMP-binding domain signature. 675 686 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:3.40.50.12780 501 930 5.4E-131 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:3.40.50.12780 1637 2058 3.2E-132 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:3.40.50.12780 3798 4202 1.9E-149 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SMART SM00824 Thioesterase 4683 4927 1.2E-4 T 15-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2200 2215 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Pfam PF00550 Phosphopantetheine attachment site 4318 4377 7.4E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Pfam PF00550 Phosphopantetheine attachment site 2178 2239 4.9E-12 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Pfam PF00550 Phosphopantetheine attachment site 1060 1120 6.0E-8 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Pfam PF00550 Phosphopantetheine attachment site 3256 3317 1.2E-10 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1668 2090 6.3E-124 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3829 4234 6.3E-137 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 532 962 1.6E-131 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2747 3167 2.4E-135 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:1.10.1200.10 3240 3326 3.5E-25 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:1.10.1200.10 4303 4384 3.9E-24 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SUPERFAMILY SSF47336 2168 2242 1.57E-19 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:3.30.559.10 2262 2636 4.4E-153 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3952 3963 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4340 4355 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:1.10.1200.10 1046 1129 5.1E-20 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 Gene3D G3DSA:1.10.1200.10 2166 2246 2.4E-26 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SUPERFAMILY SSF52777 2256 2462 4.0E-50 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SUPERFAMILY SSF52777 1356 1610 1.09E-41 T 15-10-2018 XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SUPERFAMILY SSF53474 4663 4934 6.89E-53 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SUPERFAMILY SSF47336 1050 1122 1.31E-15 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2283 ea5152650e1f7ca7a655c6bc8f600a95 4941 SUPERFAMILY SSF53474 4394 4660 1.22E-51 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_3066 9a82d733a9087ed3dc81d79c389438a2 327 SUPERFAMILY SSF46689 5 116 6.72E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3066 9a82d733a9087ed3dc81d79c389438a2 327 Pfam PF13936 Helix-turn-helix domain 3 45 3.1E-14 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_3066 9a82d733a9087ed3dc81d79c389438a2 327 SUPERFAMILY SSF53098 169 319 1.67E-26 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3066 9a82d733a9087ed3dc81d79c389438a2 327 Pfam PF00665 Integrase core domain 171 273 8.8E-13 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_3066 9a82d733a9087ed3dc81d79c389438a2 327 Gene3D G3DSA:3.30.420.10 163 324 2.7E-10 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_0054 35da62d036f7b3a3f3bd607675e111ec 461 SUPERFAMILY SSF103473 13 450 1.83E-54 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0054 35da62d036f7b3a3f3bd607675e111ec 461 Gene3D G3DSA:1.20.1250.20 256 456 1.2E-11 T 15-10-2018 XDD1_0054 35da62d036f7b3a3f3bd607675e111ec 461 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 433 2.6E-72 T 15-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 XDD1_0054 35da62d036f7b3a3f3bd607675e111ec 461 Gene3D G3DSA:1.20.1720.10 13 253 3.4E-42 T 15-10-2018 XDD1_0054 35da62d036f7b3a3f3bd607675e111ec 461 Pfam PF07690 Major Facilitator Superfamily 16 405 1.7E-36 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0054 35da62d036f7b3a3f3bd607675e111ec 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 2.6E-8 T 15-10-2018 XDD1_0054 35da62d036f7b3a3f3bd607675e111ec 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 2.6E-8 T 15-10-2018 XDD1_0054 35da62d036f7b3a3f3bd607675e111ec 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 2.6E-8 T 15-10-2018 XDD1_0054 35da62d036f7b3a3f3bd607675e111ec 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 2.6E-8 T 15-10-2018 XDD1_0054 35da62d036f7b3a3f3bd607675e111ec 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 2.6E-8 T 15-10-2018 XDD1_2501 79dd56933745fc4f94cae847a6ce4320 413 SUPERFAMILY SSF53901 215 412 3.46E-73 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2501 79dd56933745fc4f94cae847a6ce4320 413 PIRSF PIRSF000447 1 413 5.1E-195 T 15-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 XDD1_2501 79dd56933745fc4f94cae847a6ce4320 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 3.2E-191 T 15-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 XDD1_2501 79dd56933745fc4f94cae847a6ce4320 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site XDD1_2501 79dd56933745fc4f94cae847a6ce4320 413 SMART SM00825 Beta-ketoacyl synthase 6 413 2.0E-17 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XDD1_2501 79dd56933745fc4f94cae847a6ce4320 413 SUPERFAMILY SSF53901 3 253 1.43E-79 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2501 79dd56933745fc4f94cae847a6ce4320 413 Gene3D G3DSA:3.40.47.10 1 256 5.6E-91 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2501 79dd56933745fc4f94cae847a6ce4320 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 256 369 6.7E-40 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal XDD1_2501 79dd56933745fc4f94cae847a6ce4320 413 Gene3D G3DSA:3.40.47.10 258 402 9.0E-54 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2501 79dd56933745fc4f94cae847a6ce4320 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 248 1.9E-63 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XDD1_0418 ca24d85f808ee7ab69bc0fff3af50574 638 SMART SM01340 212 329 1.3E-54 T 15-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 XDD1_0418 ca24d85f808ee7ab69bc0fff3af50574 638 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 328 9.0E-37 T 15-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 XDD1_0418 ca24d85f808ee7ab69bc0fff3af50574 638 SUPERFAMILY SSF54211 191 329 1.1E-35 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_0418 ca24d85f808ee7ab69bc0fff3af50574 638 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 635 25.65 T 15-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 XDD1_0418 ca24d85f808ee7ab69bc0fff3af50574 638 SMART SM00853 461 596 6.1E-16 T 15-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 XDD1_0418 ca24d85f808ee7ab69bc0fff3af50574 638 Gene3D G3DSA:3.30.230.10 217 328 2.4E-40 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XDD1_0418 ca24d85f808ee7ab69bc0fff3af50574 638 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 309 4.7E-104 T 15-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 XDD1_0418 ca24d85f808ee7ab69bc0fff3af50574 638 SUPERFAMILY SSF118116 456 637 6.93E-40 T 15-10-2018 IPR037198 MutL, C-terminal domain superfamily XDD1_0418 ca24d85f808ee7ab69bc0fff3af50574 638 Gene3D G3DSA:3.30.565.10 1 216 3.5E-74 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_0418 ca24d85f808ee7ab69bc0fff3af50574 638 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 121 3.7E-13 T 15-10-2018 XDD1_0418 ca24d85f808ee7ab69bc0fff3af50574 638 Pfam PF08676 MutL C terminal dimerisation domain 458 588 1.1E-25 T 15-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 XDD1_0418 ca24d85f808ee7ab69bc0fff3af50574 638 SUPERFAMILY SSF55874 2 208 1.96E-57 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_0418 ca24d85f808ee7ab69bc0fff3af50574 638 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 15-10-2018 IPR014762 DNA mismatch repair, conserved site XDD1_0418 ca24d85f808ee7ab69bc0fff3af50574 638 Gene3D G3DSA:2.30.42.20 458 632 7.8E-61 T 15-10-2018 XDD1_0418 ca24d85f808ee7ab69bc0fff3af50574 638 Gene3D G3DSA:3.30.1370.100 502 590 7.8E-61 T 15-10-2018 XDD1_1151 90b8a3858f8780dbe280139eb2926b62 199 SUPERFAMILY SSF52972 2 198 2.04E-75 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XDD1_1151 90b8a3858f8780dbe280139eb2926b62 199 Gene3D G3DSA:3.90.950.10 1 199 1.6E-84 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XDD1_1151 90b8a3858f8780dbe280139eb2926b62 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 5 196 5.3E-68 T 15-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 XDD1_1151 90b8a3858f8780dbe280139eb2926b62 199 Hamap MF_01405 dITP/XTP pyrophosphatase. 4 198 51.602 T 15-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 XDD1_1151 90b8a3858f8780dbe280139eb2926b62 199 Pfam PF01725 Ham1 family 6 194 5.0E-59 T 15-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 XDD1_0295 c29f52b040aaec6e2ced5451ed9e75c2 177 PIRSF PIRSF002162 1 177 1.0E-43 T 15-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0295 c29f52b040aaec6e2ced5451ed9e75c2 177 Pfam PF00347 Ribosomal protein L6 11 82 4.4E-18 T 15-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0295 c29f52b040aaec6e2ced5451ed9e75c2 177 Pfam PF00347 Ribosomal protein L6 90 164 1.1E-18 T 15-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0295 c29f52b040aaec6e2ced5451ed9e75c2 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 15-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0295 c29f52b040aaec6e2ced5451ed9e75c2 177 SUPERFAMILY SSF56053 83 177 8.16E-36 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0295 c29f52b040aaec6e2ced5451ed9e75c2 177 SUPERFAMILY SSF56053 1 82 9.11E-23 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0295 c29f52b040aaec6e2ced5451ed9e75c2 177 Gene3D G3DSA:3.90.930.12 83 177 3.3E-40 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0295 c29f52b040aaec6e2ced5451ed9e75c2 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.1E-33 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XDD1_0295 c29f52b040aaec6e2ced5451ed9e75c2 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.1E-33 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XDD1_0295 c29f52b040aaec6e2ced5451ed9e75c2 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.1E-33 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XDD1_0295 c29f52b040aaec6e2ced5451ed9e75c2 177 Gene3D G3DSA:3.90.930.12 1 82 2.1E-30 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0295 c29f52b040aaec6e2ced5451ed9e75c2 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.7E-73 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XDD1_0295 c29f52b040aaec6e2ced5451ed9e75c2 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.242 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XDD1_3004 39762fe0aac6603eac5328240ae46918 519 SMART SM00382 254 375 0.0013 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3004 39762fe0aac6603eac5328240ae46918 519 Pfam PF00437 Type II/IV secretion system protein 129 393 2.1E-82 T 15-10-2018 IPR001482 Type II/IV secretion system protein XDD1_3004 39762fe0aac6603eac5328240ae46918 519 SUPERFAMILY SSF52540 108 513 1.91E-90 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3004 39762fe0aac6603eac5328240ae46918 519 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 321 335 - T 15-10-2018 IPR001482 Type II/IV secretion system protein XDD1_3004 39762fe0aac6603eac5328240ae46918 519 Gene3D G3DSA:3.30.450.90 93 227 2.0E-43 T 15-10-2018 XDD1_3004 39762fe0aac6603eac5328240ae46918 519 Gene3D G3DSA:3.40.50.300 228 518 3.6E-100 T 15-10-2018 XDD1_2111 6c7cc08aabfc3ec9f8edb355496170a9 462 SUPERFAMILY SSF52467 289 460 5.49E-76 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily XDD1_2111 6c7cc08aabfc3ec9f8edb355496170a9 462 PIRSF PIRSF000204 1 462 1.0E-235 T 15-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 XDD1_2111 6c7cc08aabfc3ec9f8edb355496170a9 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 459 3.6E-203 T 15-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 XDD1_2111 6c7cc08aabfc3ec9f8edb355496170a9 462 Gene3D G3DSA:3.40.50.1220 286 462 1.1E-86 T 15-10-2018 XDD1_2311 7878cbff197b0dbb15d95916aa308207 330 Gene3D G3DSA:1.10.220.30 193 330 2.0E-41 T 15-10-2018 XDD1_2311 7878cbff197b0dbb15d95916aa308207 330 SUPERFAMILY SSF48029 4 103 1.41E-20 T 15-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical XDD1_2311 7878cbff197b0dbb15d95916aa308207 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 193 218 3.6E-70 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 XDD1_2311 7878cbff197b0dbb15d95916aa308207 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 224 244 3.6E-70 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 XDD1_2311 7878cbff197b0dbb15d95916aa308207 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 3.6E-70 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 XDD1_2311 7878cbff197b0dbb15d95916aa308207 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 3.6E-70 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 XDD1_2311 7878cbff197b0dbb15d95916aa308207 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 113 136 3.6E-70 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 XDD1_2311 7878cbff197b0dbb15d95916aa308207 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 3.6E-70 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 XDD1_2311 7878cbff197b0dbb15d95916aa308207 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 270 296 3.6E-70 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 XDD1_2311 7878cbff197b0dbb15d95916aa308207 330 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 330 3.3E-135 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 XDD1_2311 7878cbff197b0dbb15d95916aa308207 330 Gene3D G3DSA:1.10.220.30 1 82 2.0E-18 T 15-10-2018 XDD1_2311 7878cbff197b0dbb15d95916aa308207 330 Pfam PF14842 FliG N-terminal domain 3 102 4.5E-30 T 15-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain XDD1_2311 7878cbff197b0dbb15d95916aa308207 330 Pfam PF01706 FliG C-terminal domain 216 322 2.5E-37 T 15-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal XDD1_2311 7878cbff197b0dbb15d95916aa308207 330 SUPERFAMILY SSF48029 113 323 5.23E-63 T 15-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical XDD1_2311 7878cbff197b0dbb15d95916aa308207 330 Gene3D G3DSA:1.10.220.30 89 190 1.8E-25 T 15-10-2018 XDD1_2311 7878cbff197b0dbb15d95916aa308207 330 Pfam PF14841 FliG middle domain 114 186 3.0E-24 T 15-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain XDD1_2311 7878cbff197b0dbb15d95916aa308207 330 PIRSF PIRSF003161 1 330 1.3E-114 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 XDD1_0835 d6b240240c5d6b4412206e0b78642569 615 Pfam PF02355 Protein export membrane protein 433 603 1.3E-15 T 15-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial XDD1_0835 d6b240240c5d6b4412206e0b78642569 615 Pfam PF07549 SecD/SecF GG Motif 120 139 1.1E-5 T 15-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site XDD1_0835 d6b240240c5d6b4412206e0b78642569 615 Pfam PF13721 SecD export protein N-terminal TM region 2 103 1.2E-37 T 15-10-2018 IPR027398 SecD export protein N-terminal TM domain XDD1_0835 d6b240240c5d6b4412206e0b78642569 615 Gene3D G3DSA:3.30.1360.200 278 431 1.0E-48 T 15-10-2018 XDD1_0835 d6b240240c5d6b4412206e0b78642569 615 Gene3D G3DSA:3.30.70.3400 222 437 1.0E-48 T 15-10-2018 XDD1_0835 d6b240240c5d6b4412206e0b78642569 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 615 48.409 T 15-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 XDD1_0835 d6b240240c5d6b4412206e0b78642569 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 601 1.3E-151 T 15-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 XDD1_0835 d6b240240c5d6b4412206e0b78642569 615 SUPERFAMILY SSF82866 328 606 3.14E-42 T 15-10-2018 XDD1_0835 d6b240240c5d6b4412206e0b78642569 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 594 1.4E-83 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial XDD1_1135 7222213b965e21667762912a343309ea 346 SUPERFAMILY SSF48150 4 226 3.14E-76 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 XDD1_1135 7222213b965e21667762912a343309ea 346 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 193 209 - T 15-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 XDD1_1135 7222213b965e21667762912a343309ea 346 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 276 1.1E-123 T 15-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 XDD1_1135 7222213b965e21667762912a343309ea 346 Gene3D G3DSA:3.90.79.10 224 346 1.4E-11 T 15-10-2018 XDD1_1135 7222213b965e21667762912a343309ea 346 SMART SM00478 40 191 1.8E-47 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XDD1_1135 7222213b965e21667762912a343309ea 346 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 167 9.7E-22 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XDD1_1135 7222213b965e21667762912a343309ea 346 Gene3D G3DSA:1.10.1670.10 10 212 3.9E-87 T 15-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 XDD1_1135 7222213b965e21667762912a343309ea 346 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 193 209 7.3E-5 T 15-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 XDD1_1135 7222213b965e21667762912a343309ea 346 Pfam PF00633 Helix-hairpin-helix motif 100 128 7.2E-8 T 15-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 XDD1_1135 7222213b965e21667762912a343309ea 346 Gene3D G3DSA:1.10.340.30 22 133 3.9E-87 T 15-10-2018 XDD1_1135 7222213b965e21667762912a343309ea 346 SMART SM00525 192 212 2.6E-5 T 15-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 XDD1_1135 7222213b965e21667762912a343309ea 346 SUPERFAMILY SSF55811 221 345 1.49E-23 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XDD1_1135 7222213b965e21667762912a343309ea 346 Pfam PF14815 NUDIX domain 234 343 1.2E-22 T 15-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 XDD1_0049 123d84d3ec592def8fef1cb45679c754 502 SMART SM00382 277 472 3.9E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0049 123d84d3ec592def8fef1cb45679c754 502 SMART SM00382 29 226 1.8E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0049 123d84d3ec592def8fef1cb45679c754 502 Gene3D G3DSA:3.40.50.300 1 240 9.9E-56 T 15-10-2018 XDD1_0049 123d84d3ec592def8fef1cb45679c754 502 Pfam PF00005 ABC transporter 22 169 2.6E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_0049 123d84d3ec592def8fef1cb45679c754 502 Gene3D G3DSA:3.40.50.300 256 501 3.2E-47 T 15-10-2018 XDD1_0049 123d84d3ec592def8fef1cb45679c754 502 SUPERFAMILY SSF52540 2 229 1.27E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0049 123d84d3ec592def8fef1cb45679c754 502 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_0049 123d84d3ec592def8fef1cb45679c754 502 SUPERFAMILY SSF52540 246 478 3.16E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0049 123d84d3ec592def8fef1cb45679c754 502 Pfam PF00005 ABC transporter 269 423 1.6E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_0332 9de8875ac6687ea35064bb7187177209 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.124 T 15-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XDD1_0332 9de8875ac6687ea35064bb7187177209 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 1.2E-264 T 15-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XDD1_0332 9de8875ac6687ea35064bb7187177209 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 15-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XDD1_0332 9de8875ac6687ea35064bb7187177209 616 SUPERFAMILY SSF52016 421 611 6.28E-60 T 15-10-2018 XDD1_0332 9de8875ac6687ea35064bb7187177209 616 Gene3D G3DSA:3.50.30.80 421 573 2.3E-55 T 15-10-2018 XDD1_0332 9de8875ac6687ea35064bb7187177209 616 SUPERFAMILY SSF143975 3 420 2.22E-133 T 15-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XDD1_0332 9de8875ac6687ea35064bb7187177209 616 Pfam PF00920 Dehydratase family 34 607 2.2E-218 T 15-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XDD1_0332 9de8875ac6687ea35064bb7187177209 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 15-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XDD1_1988 f6b5e19c2f7475bf4fcb07cfd74e7302 349 Pfam PF16868 NMT1-like family 42 330 2.2E-107 T 15-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family XDD1_1988 f6b5e19c2f7475bf4fcb07cfd74e7302 349 SUPERFAMILY SSF53850 38 331 3.69E-60 T 15-10-2018 XDD1_1988 f6b5e19c2f7475bf4fcb07cfd74e7302 349 Gene3D G3DSA:3.40.190.10 128 267 4.7E-85 T 15-10-2018 XDD1_1988 f6b5e19c2f7475bf4fcb07cfd74e7302 349 Gene3D G3DSA:3.40.190.10 42 330 4.7E-85 T 15-10-2018 XDD1_1988 f6b5e19c2f7475bf4fcb07cfd74e7302 349 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 13 330 2.7E-84 T 15-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family XDD1_1590 af507cf981647d7bd66ed0cb4a0fcd6b 396 Gene3D G3DSA:3.90.1150.10 11 391 9.7E-167 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_1590 af507cf981647d7bd66ed0cb4a0fcd6b 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 15-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 XDD1_1590 af507cf981647d7bd66ed0cb4a0fcd6b 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 8.3E-40 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XDD1_1590 af507cf981647d7bd66ed0cb4a0fcd6b 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 8.3E-40 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XDD1_1590 af507cf981647d7bd66ed0cb4a0fcd6b 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 8.3E-40 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XDD1_1590 af507cf981647d7bd66ed0cb4a0fcd6b 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 8.3E-40 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XDD1_1590 af507cf981647d7bd66ed0cb4a0fcd6b 396 Gene3D G3DSA:3.40.640.10 45 315 9.7E-167 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_1590 af507cf981647d7bd66ed0cb4a0fcd6b 396 Pfam PF00155 Aminotransferase class I and II 27 392 3.8E-91 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XDD1_1590 af507cf981647d7bd66ed0cb4a0fcd6b 396 SUPERFAMILY SSF53383 1 395 8.87E-119 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_2256 f4c275cd33ab9ac6732f99147727e1bf 355 SMART SM01005 231 355 1.1E-68 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_2256 f4c275cd33ab9ac6732f99147727e1bf 355 PRINTS PR00992 Alanine racemase signature 247 262 1.0E-69 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_2256 f4c275cd33ab9ac6732f99147727e1bf 355 PRINTS PR00992 Alanine racemase signature 27 43 1.0E-69 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_2256 f4c275cd33ab9ac6732f99147727e1bf 355 PRINTS PR00992 Alanine racemase signature 189 216 1.0E-69 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_2256 f4c275cd33ab9ac6732f99147727e1bf 355 PRINTS PR00992 Alanine racemase signature 121 133 1.0E-69 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_2256 f4c275cd33ab9ac6732f99147727e1bf 355 PRINTS PR00992 Alanine racemase signature 285 302 1.0E-69 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_2256 f4c275cd33ab9ac6732f99147727e1bf 355 PRINTS PR00992 Alanine racemase signature 337 350 1.0E-69 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_2256 f4c275cd33ab9ac6732f99147727e1bf 355 PRINTS PR00992 Alanine racemase signature 61 79 1.0E-69 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_2256 f4c275cd33ab9ac6732f99147727e1bf 355 PRINTS PR00992 Alanine racemase signature 155 166 1.0E-69 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_2256 f4c275cd33ab9ac6732f99147727e1bf 355 PRINTS PR00992 Alanine racemase signature 264 279 1.0E-69 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_2256 f4c275cd33ab9ac6732f99147727e1bf 355 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 15-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_2256 f4c275cd33ab9ac6732f99147727e1bf 355 TIGRFAM TIGR00492 alr: alanine racemase 4 355 2.7E-116 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_2256 f4c275cd33ab9ac6732f99147727e1bf 355 Pfam PF00842 Alanine racemase, C-terminal domain 231 352 3.2E-42 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_2256 f4c275cd33ab9ac6732f99147727e1bf 355 Gene3D G3DSA:2.40.37.10 9 350 2.3E-112 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XDD1_2256 f4c275cd33ab9ac6732f99147727e1bf 355 Hamap MF_01201 Alanine racemase. 2 355 33.332 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_2256 f4c275cd33ab9ac6732f99147727e1bf 355 Pfam PF01168 Alanine racemase, N-terminal domain 9 216 1.5E-61 T 15-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_2256 f4c275cd33ab9ac6732f99147727e1bf 355 SUPERFAMILY SSF50621 225 354 3.38E-46 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XDD1_2256 f4c275cd33ab9ac6732f99147727e1bf 355 Gene3D G3DSA:3.20.20.10 11 214 2.3E-112 T 15-10-2018 IPR029066 PLP-binding barrel XDD1_2256 f4c275cd33ab9ac6732f99147727e1bf 355 SUPERFAMILY SSF51419 9 232 7.52E-60 T 15-10-2018 IPR029066 PLP-binding barrel XDD1_1577 68e3ad8646de3bd07ea68c4b3251edc4 581 SUPERFAMILY SSF52540 330 579 4.71E-95 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1577 68e3ad8646de3bd07ea68c4b3251edc4 581 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 11 580 3.1E-260 T 15-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 XDD1_1577 68e3ad8646de3bd07ea68c4b3251edc4 581 Gene3D G3DSA:1.20.1560.10 2 327 1.1E-79 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_1577 68e3ad8646de3bd07ea68c4b3251edc4 581 Pfam PF00664 ABC transporter transmembrane region 27 296 9.4E-60 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XDD1_1577 68e3ad8646de3bd07ea68c4b3251edc4 581 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_1577 68e3ad8646de3bd07ea68c4b3251edc4 581 Pfam PF00005 ABC transporter 358 508 1.0E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1577 68e3ad8646de3bd07ea68c4b3251edc4 581 SUPERFAMILY SSF90123 13 326 5.62E-73 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_1577 68e3ad8646de3bd07ea68c4b3251edc4 581 Gene3D G3DSA:3.40.50.300 328 580 4.7E-95 T 15-10-2018 XDD1_1577 68e3ad8646de3bd07ea68c4b3251edc4 581 SMART SM00382 367 554 6.8E-19 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3553 39ea179a10a99b24557d32b351218527 347 Gene3D G3DSA:3.90.640.10 190 263 1.8E-131 T 15-10-2018 XDD1_3553 39ea179a10a99b24557d32b351218527 347 Pfam PF06723 MreB/Mbl protein 11 338 7.7E-151 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XDD1_3553 39ea179a10a99b24557d32b351218527 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 9.5E-66 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XDD1_3553 39ea179a10a99b24557d32b351218527 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 9.5E-66 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XDD1_3553 39ea179a10a99b24557d32b351218527 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 9.5E-66 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XDD1_3553 39ea179a10a99b24557d32b351218527 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 9.5E-66 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XDD1_3553 39ea179a10a99b24557d32b351218527 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 9.5E-66 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XDD1_3553 39ea179a10a99b24557d32b351218527 347 SUPERFAMILY SSF53067 153 340 2.72E-51 T 15-10-2018 XDD1_3553 39ea179a10a99b24557d32b351218527 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 1.5E-169 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XDD1_3553 39ea179a10a99b24557d32b351218527 347 Gene3D G3DSA:3.30.420.40 158 321 1.8E-131 T 15-10-2018 XDD1_3553 39ea179a10a99b24557d32b351218527 347 Gene3D G3DSA:3.30.420.40 14 331 1.8E-131 T 15-10-2018 XDD1_3553 39ea179a10a99b24557d32b351218527 347 SUPERFAMILY SSF53067 9 152 8.91E-38 T 15-10-2018 XDD1_3818 fc262dfc80e92b5a420f7a50a99bb37b 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 135 2.3E-25 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XDD1_3818 fc262dfc80e92b5a420f7a50a99bb37b 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 600 3.3E-288 T 15-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 XDD1_3818 fc262dfc80e92b5a420f7a50a99bb37b 607 Gene3D G3DSA:3.30.70.240 390 483 7.3E-128 T 15-10-2018 XDD1_3818 fc262dfc80e92b5a420f7a50a99bb37b 607 SUPERFAMILY SSF52540 3 220 5.64E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3818 fc262dfc80e92b5a420f7a50a99bb37b 607 SUPERFAMILY SSF54980 399 513 7.19E-27 T 15-10-2018 IPR035647 EF-G domain III/V-like XDD1_3818 fc262dfc80e92b5a420f7a50a99bb37b 607 SUPERFAMILY SSF50447 152 300 4.64E-32 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XDD1_3818 fc262dfc80e92b5a420f7a50a99bb37b 607 Gene3D G3DSA:2.40.30.10 200 300 3.8E-35 T 15-10-2018 XDD1_3818 fc262dfc80e92b5a420f7a50a99bb37b 607 Gene3D G3DSA:2.40.50.250 484 600 7.3E-128 T 15-10-2018 XDD1_3818 fc262dfc80e92b5a420f7a50a99bb37b 607 Pfam PF00679 Elongation factor G C-terminus 398 477 3.1E-21 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like XDD1_3818 fc262dfc80e92b5a420f7a50a99bb37b 607 SUPERFAMILY SSF54980 303 388 6.83E-15 T 15-10-2018 IPR035647 EF-G domain III/V-like XDD1_3818 fc262dfc80e92b5a420f7a50a99bb37b 607 PRINTS PR00315 GTP-binding elongation factor signature 72 82 3.1E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3818 fc262dfc80e92b5a420f7a50a99bb37b 607 PRINTS PR00315 GTP-binding elongation factor signature 8 21 3.1E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3818 fc262dfc80e92b5a420f7a50a99bb37b 607 PRINTS PR00315 GTP-binding elongation factor signature 124 133 3.1E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3818 fc262dfc80e92b5a420f7a50a99bb37b 607 PRINTS PR00315 GTP-binding elongation factor signature 52 60 3.1E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3818 fc262dfc80e92b5a420f7a50a99bb37b 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site XDD1_3818 fc262dfc80e92b5a420f7a50a99bb37b 607 Pfam PF00009 Elongation factor Tu GTP binding domain 5 196 6.3E-56 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3818 fc262dfc80e92b5a420f7a50a99bb37b 607 Gene3D G3DSA:3.40.50.300 2 199 2.0E-68 T 15-10-2018 XDD1_3818 fc262dfc80e92b5a420f7a50a99bb37b 607 Pfam PF03144 Elongation factor Tu domain 2 220 290 1.3E-11 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XDD1_3818 fc262dfc80e92b5a420f7a50a99bb37b 607 Gene3D G3DSA:3.30.70.870 307 591 7.3E-128 T 15-10-2018 XDD1_3387 b6e0946bf36aaecd6313e406ab2b72f3 433 SUPERFAMILY SSF54534 174 278 1.96E-27 T 15-10-2018 XDD1_3387 b6e0946bf36aaecd6313e406ab2b72f3 433 Pfam PF09312 SurA N-terminal domain 26 143 9.5E-40 T 15-10-2018 IPR015391 SurA N-terminal XDD1_3387 b6e0946bf36aaecd6313e406ab2b72f3 433 Hamap MF_01183 Chaperone SurA [surA]. 8 429 33.41 T 15-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 XDD1_3387 b6e0946bf36aaecd6313e406ab2b72f3 433 Gene3D G3DSA:3.10.50.40 284 386 2.6E-82 T 15-10-2018 XDD1_3387 b6e0946bf36aaecd6313e406ab2b72f3 433 Gene3D G3DSA:1.10.4030.10 22 149 4.6E-40 T 15-10-2018 XDD1_3387 b6e0946bf36aaecd6313e406ab2b72f3 433 SUPERFAMILY SSF54534 284 385 1.96E-30 T 15-10-2018 XDD1_3387 b6e0946bf36aaecd6313e406ab2b72f3 433 Pfam PF00639 PPIC-type PPIASE domain 180 273 2.3E-18 T 15-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 XDD1_3387 b6e0946bf36aaecd6313e406ab2b72f3 433 Pfam PF00639 PPIC-type PPIASE domain 290 381 2.0E-25 T 15-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 XDD1_3387 b6e0946bf36aaecd6313e406ab2b72f3 433 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 322 343 - T 15-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 XDD1_3387 b6e0946bf36aaecd6313e406ab2b72f3 433 SUPERFAMILY SSF109998 26 201 2.2E-38 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily XDD1_3387 b6e0946bf36aaecd6313e406ab2b72f3 433 Gene3D G3DSA:3.10.50.40 176 283 2.6E-82 T 15-10-2018 XDD1_3003 2fd07841e6463f0c5c5e16ba55d207f2 140 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 2.1E-10 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site XDD1_3003 2fd07841e6463f0c5c5e16ba55d207f2 140 Gene3D G3DSA:3.30.700.10 6 139 1.4E-22 T 15-10-2018 XDD1_3003 2fd07841e6463f0c5c5e16ba55d207f2 140 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site XDD1_3003 2fd07841e6463f0c5c5e16ba55d207f2 140 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 26 4.4E-10 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site XDD1_3003 2fd07841e6463f0c5c5e16ba55d207f2 140 SUPERFAMILY SSF54523 6 106 4.71E-20 T 15-10-2018 XDD1_3030 ddb855ac8c943c6b290fb2ce59bfe943 575 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 15-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 XDD1_3030 ddb855ac8c943c6b290fb2ce59bfe943 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 167 6.2E-59 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 XDD1_3030 ddb855ac8c943c6b290fb2ce59bfe943 575 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 570 2.1E-275 T 15-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 XDD1_3030 ddb855ac8c943c6b290fb2ce59bfe943 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 546 1.0E-49 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 XDD1_3030 ddb855ac8c943c6b290fb2ce59bfe943 575 Gene3D G3DSA:3.40.50.970 1 176 7.2E-72 T 15-10-2018 XDD1_3030 ddb855ac8c943c6b290fb2ce59bfe943 575 SUPERFAMILY SSF52518 371 569 2.95E-66 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_3030 ddb855ac8c943c6b290fb2ce59bfe943 575 Gene3D G3DSA:3.40.50.1220 190 360 2.4E-61 T 15-10-2018 XDD1_3030 ddb855ac8c943c6b290fb2ce59bfe943 575 SUPERFAMILY SSF52467 188 362 1.26E-61 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily XDD1_3030 ddb855ac8c943c6b290fb2ce59bfe943 575 SUPERFAMILY SSF52518 2 182 1.43E-65 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_3030 ddb855ac8c943c6b290fb2ce59bfe943 575 Gene3D G3DSA:3.40.50.970 364 567 1.3E-65 T 15-10-2018 XDD1_3030 ddb855ac8c943c6b290fb2ce59bfe943 575 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 2.2E-46 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 XDD1_0046 8dab56959c5ab3d32aec144df10c60db 330 Gene3D G3DSA:3.30.930.10 1 330 1.0E-141 T 15-10-2018 XDD1_0046 8dab56959c5ab3d32aec144df10c60db 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 44.677 T 15-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 XDD1_0046 8dab56959c5ab3d32aec144df10c60db 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 1.9E-92 T 15-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 XDD1_0046 8dab56959c5ab3d32aec144df10c60db 330 PIRSF PIRSF001555 1 329 4.0E-149 T 15-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 XDD1_0046 8dab56959c5ab3d32aec144df10c60db 330 SUPERFAMILY SSF55681 5 328 3.25E-97 T 15-10-2018 XDD1_0046 8dab56959c5ab3d32aec144df10c60db 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 6.9E-179 T 15-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 XDD1_1433 27f997b8bda4edb834b6498b6b883bcf 334 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 244 6.5E-9 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 XDD1_1433 27f997b8bda4edb834b6498b6b883bcf 334 Gene3D G3DSA:3.40.50.720 7 307 1.7E-73 T 15-10-2018 XDD1_1433 27f997b8bda4edb834b6498b6b883bcf 334 SUPERFAMILY SSF51735 3 154 3.52E-50 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1433 27f997b8bda4edb834b6498b6b883bcf 334 Gene3D G3DSA:3.30.360.10 129 321 1.7E-73 T 15-10-2018 XDD1_1433 27f997b8bda4edb834b6498b6b883bcf 334 SUPERFAMILY SSF55347 130 303 8.76E-29 T 15-10-2018 XDD1_1433 27f997b8bda4edb834b6498b6b883bcf 334 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 124 2.7E-27 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 XDD1_2290 d2877ee0c2794261d8ed508cfac2a3f6 360 Gene3D G3DSA:3.20.20.30 5 359 2.0E-94 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 XDD1_2290 d2877ee0c2794261d8ed508cfac2a3f6 360 SUPERFAMILY SSF51679 6 355 1.83E-77 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 XDD1_2290 d2877ee0c2794261d8ed508cfac2a3f6 360 TIGRFAM TIGR04021 LLM_DMSO2_sfnG: dimethyl sulfone monooxygenase SfnG 9 356 2.2E-174 T 15-10-2018 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG KEGG: 00920+1.14.14.35|MetaCyc: PWY-6059 XDD1_2290 d2877ee0c2794261d8ed508cfac2a3f6 360 Pfam PF00296 Luciferase-like monooxygenase 10 328 9.7E-60 T 15-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 XDD1_0983 7b3c6603ae6650af39de9e23b9fdcd88 249 Gene3D G3DSA:3.20.20.140 209 249 8.3E-8 T 15-10-2018 XDD1_0983 7b3c6603ae6650af39de9e23b9fdcd88 249 Pfam PF00929 Exonuclease 9 173 1.0E-38 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XDD1_0983 7b3c6603ae6650af39de9e23b9fdcd88 249 SUPERFAMILY SSF53098 7 185 1.86E-52 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0983 7b3c6603ae6650af39de9e23b9fdcd88 249 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 225 1.1E-86 T 15-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_0983 7b3c6603ae6650af39de9e23b9fdcd88 249 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 2.3E-93 T 15-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_0983 7b3c6603ae6650af39de9e23b9fdcd88 249 SMART SM00479 7 184 2.7E-47 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XDD1_0983 7b3c6603ae6650af39de9e23b9fdcd88 249 Gene3D G3DSA:3.30.420.10 1 190 9.8E-60 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_1475 7b70fa5dcecc3c11796a9de5e2d5e2d8 346 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.81 T 15-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XDD1_1475 7b70fa5dcecc3c11796a9de5e2d5e2d8 346 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 3.3E-20 T 15-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XDD1_1475 7b70fa5dcecc3c11796a9de5e2d5e2d8 346 SMART SM00876 220 312 1.3E-49 T 15-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XDD1_1475 7b70fa5dcecc3c11796a9de5e2d5e2d8 346 SMART SM00729 43 255 1.5E-42 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 XDD1_1475 7b70fa5dcecc3c11796a9de5e2d5e2d8 346 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 4.0E-126 T 15-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XDD1_1475 7b70fa5dcecc3c11796a9de5e2d5e2d8 346 SUPERFAMILY SSF102114 5 313 7.46E-95 T 15-10-2018 XDD1_1475 7b70fa5dcecc3c11796a9de5e2d5e2d8 346 PIRSF PIRSF001619 1 318 3.1E-140 T 15-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XDD1_1475 7b70fa5dcecc3c11796a9de5e2d5e2d8 346 Gene3D G3DSA:3.20.20.70 4 315 4.1E-136 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_1475 7b70fa5dcecc3c11796a9de5e2d5e2d8 346 Pfam PF04055 Radical SAM superfamily 50 203 8.3E-17 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XDD1_0074 42faf239b05413444c89527aec5098da 183 Pfam PF05137 Fimbrial assembly protein (PilN) 102 173 3.1E-8 T 15-10-2018 IPR007813 Fimbrial assembly PilN XDD1_0074 42faf239b05413444c89527aec5098da 183 PIRSF PIRSF020785 1 183 4.1E-38 T 15-10-2018 IPR016778 Competence protein ComB XDD1_1362 e7a9f8504cad4206340c671faf4bb78f 494 Pfam PF00005 ABC transporter 23 163 1.3E-17 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1362 e7a9f8504cad4206340c671faf4bb78f 494 SMART SM00382 28 260 2.0E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1362 e7a9f8504cad4206340c671faf4bb78f 494 SMART SM00382 285 494 3.8E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1362 e7a9f8504cad4206340c671faf4bb78f 494 Gene3D G3DSA:3.40.50.300 5 238 1.0E-34 T 15-10-2018 XDD1_1362 e7a9f8504cad4206340c671faf4bb78f 494 Gene3D G3DSA:3.40.50.300 244 493 2.6E-51 T 15-10-2018 XDD1_1362 e7a9f8504cad4206340c671faf4bb78f 494 SUPERFAMILY SSF52540 253 484 1.63E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1362 e7a9f8504cad4206340c671faf4bb78f 494 SUPERFAMILY SSF52540 4 227 6.23E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1362 e7a9f8504cad4206340c671faf4bb78f 494 Pfam PF00005 ABC transporter 276 429 2.1E-25 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1995 4f195a704e641ff89370aae3a91b5ed4 363 PIRSF PIRSF006641 1 363 6.1E-159 T 15-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 XDD1_1995 4f195a704e641ff89370aae3a91b5ed4 363 SUPERFAMILY SSF81271 279 359 9.16E-36 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 XDD1_1995 4f195a704e641ff89370aae3a91b5ed4 363 Gene3D G3DSA:3.40.50.300 4 278 1.4E-153 T 15-10-2018 XDD1_1995 4f195a704e641ff89370aae3a91b5ed4 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.2E-176 T 15-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 XDD1_1995 4f195a704e641ff89370aae3a91b5ed4 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.3E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_1995 4f195a704e641ff89370aae3a91b5ed4 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.3E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_1995 4f195a704e641ff89370aae3a91b5ed4 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.3E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_1995 4f195a704e641ff89370aae3a91b5ed4 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.3E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_1995 4f195a704e641ff89370aae3a91b5ed4 363 Gene3D G3DSA:3.10.20.30 48 362 1.4E-153 T 15-10-2018 IPR012675 Beta-grasp domain superfamily XDD1_1995 4f195a704e641ff89370aae3a91b5ed4 363 Gene3D G3DSA:1.10.150.300 120 200 1.4E-153 T 15-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 XDD1_1995 4f195a704e641ff89370aae3a91b5ed4 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.977 T 15-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 XDD1_1995 4f195a704e641ff89370aae3a91b5ed4 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 2.2E-21 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_1995 4f195a704e641ff89370aae3a91b5ed4 363 SUPERFAMILY SSF52540 3 301 2.8E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1995 4f195a704e641ff89370aae3a91b5ed4 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 3.0E-39 T 15-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 XDD1_2557 9f6df2f3d0c427390cb18f714f09b4b0 763 Gene3D G3DSA:1.10.1650.20 341 394 1.5E-156 T 15-10-2018 XDD1_2557 9f6df2f3d0c427390cb18f714f09b4b0 763 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 4.2E-181 T 15-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XDD1_2557 9f6df2f3d0c427390cb18f714f09b4b0 763 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XDD1_2557 9f6df2f3d0c427390cb18f714f09b4b0 763 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 9.2E-119 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XDD1_2557 9f6df2f3d0c427390cb18f714f09b4b0 763 SUPERFAMILY SSF51998 222 741 9.16E-169 T 15-10-2018 XDD1_2557 9f6df2f3d0c427390cb18f714f09b4b0 763 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 7.4E-13 T 15-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XDD1_2557 9f6df2f3d0c427390cb18f714f09b4b0 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 1.0E-40 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XDD1_2557 9f6df2f3d0c427390cb18f714f09b4b0 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.0E-40 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XDD1_2557 9f6df2f3d0c427390cb18f714f09b4b0 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 1.0E-40 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XDD1_2557 9f6df2f3d0c427390cb18f714f09b4b0 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 1.0E-40 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XDD1_2557 9f6df2f3d0c427390cb18f714f09b4b0 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 1.0E-40 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XDD1_2557 9f6df2f3d0c427390cb18f714f09b4b0 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 1.0E-40 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XDD1_2557 9f6df2f3d0c427390cb18f714f09b4b0 763 Gene3D G3DSA:3.20.70.20 209 732 1.5E-156 T 15-10-2018 XDD1_2557 9f6df2f3d0c427390cb18f714f09b4b0 763 SUPERFAMILY SSF48168 10 221 1.23E-73 T 15-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XDD1_2557 9f6df2f3d0c427390cb18f714f09b4b0 763 Pfam PF03477 ATP cone domain 6 92 4.5E-16 T 15-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 XDD1_0297 fb1b3eaaabc807fd20ae99e55ccc3f5f 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 1.6E-70 T 15-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 XDD1_0297 fb1b3eaaabc807fd20ae99e55ccc3f5f 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.55 T 15-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 XDD1_0297 fb1b3eaaabc807fd20ae99e55ccc3f5f 166 Gene3D G3DSA:3.30.160.20 1 72 2.4E-33 T 15-10-2018 XDD1_0297 fb1b3eaaabc807fd20ae99e55ccc3f5f 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 6.3E-29 T 15-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 XDD1_0297 fb1b3eaaabc807fd20ae99e55ccc3f5f 166 SUPERFAMILY SSF54211 79 159 3.54E-27 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_0297 fb1b3eaaabc807fd20ae99e55ccc3f5f 166 Gene3D G3DSA:3.30.230.10 74 166 1.7E-38 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XDD1_0297 fb1b3eaaabc807fd20ae99e55ccc3f5f 166 SUPERFAMILY SSF54768 9 75 1.57E-23 T 15-10-2018 XDD1_0297 fb1b3eaaabc807fd20ae99e55ccc3f5f 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 15-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site XDD1_0297 fb1b3eaaabc807fd20ae99e55ccc3f5f 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 2.8E-30 T 15-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 XDD1_2033 da87df6ff6be1e368da7446396947e9c 184 SUPERFAMILY SSF160719 60 170 2.88E-8 T 15-10-2018 XDD1_2033 da87df6ff6be1e368da7446396947e9c 184 Pfam PF04965 Gene 25-like lysozyme 56 159 4.2E-19 T 15-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD XDD1_3974 74fbb49d33b4944065f5435323670d54 108 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 13.279 T 15-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 XDD1_3974 74fbb49d33b4944065f5435323670d54 108 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 104 2.7E-33 T 15-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 XDD1_3974 74fbb49d33b4944065f5435323670d54 108 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 5 87 7.0E-40 T 15-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 XDD1_3974 74fbb49d33b4944065f5435323670d54 108 Gene3D G3DSA:3.30.230.10 1 108 2.6E-40 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XDD1_3974 74fbb49d33b4944065f5435323670d54 108 SUPERFAMILY SSF54211 1 104 2.0E-28 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_3974 74fbb49d33b4944065f5435323670d54 108 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 45 59 - T 15-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 XDD1_3974 74fbb49d33b4944065f5435323670d54 108 Pfam PF00825 Ribonuclease P 1 100 1.7E-30 T 15-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 XDD1_1176 6553818a18814d1a4361e9555de37176 408 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 2 408 62.826 T 15-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 XDD1_1176 6553818a18814d1a4361e9555de37176 408 PIRSF PIRSF000044 1 408 1.2E-218 T 15-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 XDD1_1176 6553818a18814d1a4361e9555de37176 408 Gene3D G3DSA:3.40.50.80 276 394 1.0E-32 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XDD1_1176 6553818a18814d1a4361e9555de37176 408 SUPERFAMILY SSF54292 41 125 3.23E-22 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 XDD1_1176 6553818a18814d1a4361e9555de37176 408 Gene3D G3DSA:2.40.30.10 127 265 4.1E-50 T 15-10-2018 XDD1_1176 6553818a18814d1a4361e9555de37176 408 Pfam PF00175 Oxidoreductase NAD-binding domain 278 387 1.6E-17 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 XDD1_1176 6553818a18814d1a4361e9555de37176 408 SUPERFAMILY SSF52343 256 403 1.27E-37 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XDD1_1176 6553818a18814d1a4361e9555de37176 408 Gene3D G3DSA:3.10.20.30 35 126 1.3E-30 T 15-10-2018 IPR012675 Beta-grasp domain superfamily XDD1_1176 6553818a18814d1a4361e9555de37176 408 SUPERFAMILY SSF63380 106 273 1.86E-35 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XDD1_1176 6553818a18814d1a4361e9555de37176 408 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 277 296 4.0E-5 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_1176 6553818a18814d1a4361e9555de37176 408 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 210 217 4.0E-5 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_1176 6553818a18814d1a4361e9555de37176 408 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 243 252 4.0E-5 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_1176 6553818a18814d1a4361e9555de37176 408 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 374 382 4.0E-5 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_1176 6553818a18814d1a4361e9555de37176 408 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 41 115 1.4E-10 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 XDD1_1176 6553818a18814d1a4361e9555de37176 408 Pfam PF00970 Oxidoreductase FAD-binding domain 205 267 1.4E-8 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 XDD1_1176 6553818a18814d1a4361e9555de37176 408 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 4 408 1.5E-230 T 15-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 XDD1_0399 1b3f1a677260193421ad59e99f93ba84 352 Gene3D G3DSA:1.10.40.50 278 352 9.3E-28 T 15-10-2018 XDD1_0399 1b3f1a677260193421ad59e99f93ba84 352 Pfam PF03193 RsgA GTPase 101 278 1.8E-54 T 15-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 XDD1_0399 1b3f1a677260193421ad59e99f93ba84 352 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 336 7.5E-91 T 15-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 XDD1_0399 1b3f1a677260193421ad59e99f93ba84 352 Gene3D G3DSA:3.40.50.300 104 277 5.3E-47 T 15-10-2018 XDD1_0399 1b3f1a677260193421ad59e99f93ba84 352 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 41 342 37.014 T 15-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 XDD1_0399 1b3f1a677260193421ad59e99f93ba84 352 Gene3D G3DSA:2.40.50.140 36 103 5.3E-25 T 15-10-2018 XDD1_0399 1b3f1a677260193421ad59e99f93ba84 352 SUPERFAMILY SSF52540 115 342 9.77E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0803 b9c077736d01010fda0ccbb7237ccdb2 86 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 4.8E-21 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like XDD1_0803 b9c077736d01010fda0ccbb7237ccdb2 86 Gene3D G3DSA:3.30.1340.10 2 85 2.6E-24 T 15-10-2018 IPR035895 HPr-like superfamily XDD1_0803 b9c077736d01010fda0ccbb7237ccdb2 86 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 15-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site XDD1_0803 b9c077736d01010fda0ccbb7237ccdb2 86 SUPERFAMILY SSF55594 3 83 2.09E-20 T 15-10-2018 IPR035895 HPr-like superfamily XDD1_0803 b9c077736d01010fda0ccbb7237ccdb2 86 PRINTS PR00107 Phosphocarrier protein signature 38 53 6.5E-13 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like XDD1_0803 b9c077736d01010fda0ccbb7237ccdb2 86 PRINTS PR00107 Phosphocarrier protein signature 13 29 6.5E-13 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like XDD1_0803 b9c077736d01010fda0ccbb7237ccdb2 86 PRINTS PR00107 Phosphocarrier protein signature 53 70 6.5E-13 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like XDD1_0803 b9c077736d01010fda0ccbb7237ccdb2 86 Pfam PF00381 PTS HPr component phosphorylation site 4 82 1.3E-21 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like XDD1_0045 8f4f7d8b4cd72c7f5f2a152aafdb2c82 153 SUPERFAMILY SSF54909 68 153 8.04E-19 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel XDD1_0045 8f4f7d8b4cd72c7f5f2a152aafdb2c82 153 Gene3D G3DSA:3.30.70.920 59 141 3.0E-34 T 15-10-2018 XDD1_0045 8f4f7d8b4cd72c7f5f2a152aafdb2c82 153 SUPERFAMILY SSF46785 5 67 2.26E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_0045 8f4f7d8b4cd72c7f5f2a152aafdb2c82 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 15-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site XDD1_0045 8f4f7d8b4cd72c7f5f2a152aafdb2c82 153 SMART SM00344 7 114 7.9E-43 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 XDD1_0045 8f4f7d8b4cd72c7f5f2a152aafdb2c82 153 Gene3D G3DSA:1.10.10.10 3 58 5.1E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0045 8f4f7d8b4cd72c7f5f2a152aafdb2c82 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 3.5E-12 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 XDD1_0045 8f4f7d8b4cd72c7f5f2a152aafdb2c82 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 3.5E-12 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 XDD1_0045 8f4f7d8b4cd72c7f5f2a152aafdb2c82 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 3.5E-12 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 XDD1_0045 8f4f7d8b4cd72c7f5f2a152aafdb2c82 153 Pfam PF01037 Lrp/AsnC ligand binding domain 77 144 1.1E-16 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain XDD1_0045 8f4f7d8b4cd72c7f5f2a152aafdb2c82 153 Pfam PF13404 AsnC-type helix-turn-helix domain 7 48 8.3E-14 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 XDD1_2766 f8689351f90e4e152fe059edbde6ff19 496 Gene3D G3DSA:3.40.50.300 207 383 1.1E-48 T 15-10-2018 XDD1_2766 f8689351f90e4e152fe059edbde6ff19 496 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 465 2.1E-179 T 15-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 XDD1_2766 f8689351f90e4e152fe059edbde6ff19 496 Pfam PF01926 50S ribosome-binding GTPase 212 329 2.0E-24 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_2766 f8689351f90e4e152fe059edbde6ff19 496 Pfam PF01926 50S ribosome-binding GTPase 5 119 2.8E-27 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_2766 f8689351f90e4e152fe059edbde6ff19 496 PIRSF PIRSF006485 1 473 1.8E-179 T 15-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 XDD1_2766 f8689351f90e4e152fe059edbde6ff19 496 SUPERFAMILY SSF52540 4 180 4.0E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2766 f8689351f90e4e152fe059edbde6ff19 496 Gene3D G3DSA:3.30.300.20 385 467 6.4E-19 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta XDD1_2766 f8689351f90e4e152fe059edbde6ff19 496 Hamap MF_00195 GTPase Der [der]. 2 468 39.132 T 15-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 XDD1_2766 f8689351f90e4e152fe059edbde6ff19 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.7E-10 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_2766 f8689351f90e4e152fe059edbde6ff19 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 6.7E-10 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_2766 f8689351f90e4e152fe059edbde6ff19 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 211 346 5.5E-22 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XDD1_2766 f8689351f90e4e152fe059edbde6ff19 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 156 2.0E-23 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XDD1_2766 f8689351f90e4e152fe059edbde6ff19 496 SUPERFAMILY SSF52540 209 471 1.06E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2766 f8689351f90e4e152fe059edbde6ff19 496 Gene3D G3DSA:3.40.50.300 2 159 2.9E-43 T 15-10-2018 XDD1_2766 f8689351f90e4e152fe059edbde6ff19 496 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 385 465 4.0E-25 T 15-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like XDD1_2330 3284c23b3304783de218ff516ced60f0 545 SUPERFAMILY SSF64518 134 543 1.96E-40 T 15-10-2018 XDD1_2330 3284c23b3304783de218ff516ced60f0 545 Pfam PF00460 Flagella basal body rod protein 6 35 3.5E-8 T 15-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 XDD1_2330 3284c23b3304783de218ff516ced60f0 545 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 353 4.5E-73 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 XDD1_2330 3284c23b3304783de218ff516ced60f0 545 PRINTS PR01005 Flagellar hook-associated protein signature 511 535 3.2E-67 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 XDD1_2330 3284c23b3304783de218ff516ced60f0 545 PRINTS PR01005 Flagellar hook-associated protein signature 359 381 3.2E-67 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 XDD1_2330 3284c23b3304783de218ff516ced60f0 545 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 3.2E-67 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 XDD1_2330 3284c23b3304783de218ff516ced60f0 545 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 3.2E-67 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 XDD1_2330 3284c23b3304783de218ff516ced60f0 545 PRINTS PR01005 Flagellar hook-associated protein signature 124 144 3.2E-67 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 XDD1_2330 3284c23b3304783de218ff516ced60f0 545 PRINTS PR01005 Flagellar hook-associated protein signature 157 181 3.2E-67 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 XDD1_2330 3284c23b3304783de218ff516ced60f0 545 PRINTS PR01005 Flagellar hook-associated protein signature 259 281 3.2E-67 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 XDD1_2330 3284c23b3304783de218ff516ced60f0 545 PRINTS PR01005 Flagellar hook-associated protein signature 407 424 3.2E-67 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 XDD1_2330 3284c23b3304783de218ff516ced60f0 545 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 3.2E-67 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 XDD1_2330 3284c23b3304783de218ff516ced60f0 545 PRINTS PR01005 Flagellar hook-associated protein signature 439 458 3.2E-67 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 XDD1_2330 3284c23b3304783de218ff516ced60f0 545 PRINTS PR01005 Flagellar hook-associated protein signature 464 485 3.2E-67 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 XDD1_2330 3284c23b3304783de218ff516ced60f0 545 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 489 543 1.1E-6 T 15-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain XDD1_3844 83d8c60db437105a0654531cdc671b3a 206 SUPERFAMILY SSF46689 2 81 3.85E-15 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3844 83d8c60db437105a0654531cdc671b3a 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 8.8E-10 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_3844 83d8c60db437105a0654531cdc671b3a 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.0E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_3844 83d8c60db437105a0654531cdc671b3a 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.0E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_3844 83d8c60db437105a0654531cdc671b3a 206 Gene3D G3DSA:1.10.357.10 5 185 1.1E-35 T 15-10-2018 XDD1_0363 5cb6ba40ca95daa00aaa0a1cdc24b950 313 SUPERFAMILY SSF54782 220 308 5.62E-28 T 15-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XDD1_0363 5cb6ba40ca95daa00aaa0a1cdc24b950 313 Gene3D G3DSA:3.40.190.10 6 216 1.3E-84 T 15-10-2018 XDD1_0363 5cb6ba40ca95daa00aaa0a1cdc24b950 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 213 2.1E-79 T 15-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XDD1_0363 5cb6ba40ca95daa00aaa0a1cdc24b950 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 1.5E-49 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XDD1_0363 5cb6ba40ca95daa00aaa0a1cdc24b950 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 1.5E-49 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XDD1_0363 5cb6ba40ca95daa00aaa0a1cdc24b950 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 1.5E-49 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XDD1_0363 5cb6ba40ca95daa00aaa0a1cdc24b950 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 1.5E-49 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XDD1_0363 5cb6ba40ca95daa00aaa0a1cdc24b950 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 1.5E-49 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XDD1_0363 5cb6ba40ca95daa00aaa0a1cdc24b950 313 PIRSF PIRSF001438 1 311 2.5E-123 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XDD1_0363 5cb6ba40ca95daa00aaa0a1cdc24b950 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 3.9E-21 T 15-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XDD1_0363 5cb6ba40ca95daa00aaa0a1cdc24b950 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 2.1E-114 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XDD1_0363 5cb6ba40ca95daa00aaa0a1cdc24b950 313 SUPERFAMILY SSF53850 4 219 5.57E-87 T 15-10-2018 XDD1_0363 5cb6ba40ca95daa00aaa0a1cdc24b950 313 Gene3D G3DSA:3.30.160.40 221 306 4.0E-29 T 15-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XDD1_0363 5cb6ba40ca95daa00aaa0a1cdc24b950 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 15-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XDD1_0363 5cb6ba40ca95daa00aaa0a1cdc24b950 313 Gene3D G3DSA:3.40.190.10 100 199 1.3E-84 T 15-10-2018 XDD1_0363 5cb6ba40ca95daa00aaa0a1cdc24b950 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.595 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XDD1_1260 056551e9902fb9156b1ae7bec3bb172c 69 Gene3D G3DSA:2.40.50.140 1 68 3.5E-32 T 15-10-2018 XDD1_1260 056551e9902fb9156b1ae7bec3bb172c 69 SMART SM00357 5 69 1.3E-33 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 XDD1_1260 056551e9902fb9156b1ae7bec3bb172c 69 SUPERFAMILY SSF50249 3 68 4.5E-26 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_1260 056551e9902fb9156b1ae7bec3bb172c 69 PRINTS PR00050 Cold shock protein signature 6 21 4.4E-19 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XDD1_1260 056551e9902fb9156b1ae7bec3bb172c 69 PRINTS PR00050 Cold shock protein signature 42 60 4.4E-19 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XDD1_1260 056551e9902fb9156b1ae7bec3bb172c 69 PRINTS PR00050 Cold shock protein signature 27 36 4.4E-19 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XDD1_1260 056551e9902fb9156b1ae7bec3bb172c 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.0E-33 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XDD1_1260 056551e9902fb9156b1ae7bec3bb172c 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 15-10-2018 IPR019844 Cold-shock conserved site XDD1_1260 056551e9902fb9156b1ae7bec3bb172c 69 PIRSF PIRSF002599 1 69 8.5E-27 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 XDD1_1436 b1840c7a3cd96019b2795ed94dd87d19 413 Pfam PF03453 MoeA N-terminal region (domain I and II) 10 170 8.3E-46 T 15-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 XDD1_1436 b1840c7a3cd96019b2795ed94dd87d19 413 Pfam PF00994 Probable molybdopterin binding domain 185 320 5.4E-26 T 15-10-2018 IPR001453 MoaB/Mog domain XDD1_1436 b1840c7a3cd96019b2795ed94dd87d19 413 Gene3D G3DSA:2.40.340.10 331 401 6.0E-147 T 15-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 XDD1_1436 b1840c7a3cd96019b2795ed94dd87d19 413 Gene3D G3DSA:3.40.980.10 178 330 6.0E-147 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily XDD1_1436 b1840c7a3cd96019b2795ed94dd87d19 413 Pfam PF03454 MoeA C-terminal region (domain IV) 335 406 7.7E-16 T 15-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 XDD1_1436 b1840c7a3cd96019b2795ed94dd87d19 413 SUPERFAMILY SSF63867 330 410 2.75E-22 T 15-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 XDD1_1436 b1840c7a3cd96019b2795ed94dd87d19 413 Gene3D G3DSA:2.170.190.11 53 144 6.0E-147 T 15-10-2018 XDD1_1436 b1840c7a3cd96019b2795ed94dd87d19 413 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 179 316 8.8E-34 T 15-10-2018 IPR001453 MoaB/Mog domain XDD1_1436 b1840c7a3cd96019b2795ed94dd87d19 413 SUPERFAMILY SSF63882 9 179 1.44E-56 T 15-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 XDD1_1436 b1840c7a3cd96019b2795ed94dd87d19 413 Gene3D G3DSA:3.90.105.10 29 177 6.0E-147 T 15-10-2018 XDD1_1436 b1840c7a3cd96019b2795ed94dd87d19 413 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 256 289 - T 15-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 XDD1_1436 b1840c7a3cd96019b2795ed94dd87d19 413 SMART SM00852 183 320 2.8E-41 T 15-10-2018 IPR001453 MoaB/Mog domain XDD1_1436 b1840c7a3cd96019b2795ed94dd87d19 413 SUPERFAMILY SSF53218 180 325 8.64E-43 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily XDD1_0860 09284eaaf656a035a9b9ca2b19dba476 482 Gene3D G3DSA:3.40.50.620 175 395 2.3E-54 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_0860 09284eaaf656a035a9b9ca2b19dba476 482 Gene3D G3DSA:3.30.2130.30 1 174 7.6E-36 T 15-10-2018 XDD1_0860 09284eaaf656a035a9b9ca2b19dba476 482 SUPERFAMILY SSF143437 1 173 2.96E-50 T 15-10-2018 XDD1_0860 09284eaaf656a035a9b9ca2b19dba476 482 Gene3D G3DSA:3.40.250.10 396 482 1.6E-10 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily XDD1_0860 09284eaaf656a035a9b9ca2b19dba476 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 370 2.4E-129 T 15-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 XDD1_0860 09284eaaf656a035a9b9ca2b19dba476 482 Pfam PF02926 THUMP domain 29 161 3.3E-25 T 15-10-2018 IPR004114 THUMP domain GO:0003723 XDD1_0860 09284eaaf656a035a9b9ca2b19dba476 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 228.969 T 15-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 XDD1_0860 09284eaaf656a035a9b9ca2b19dba476 482 SMART SM00981 75 165 5.0E-24 T 15-10-2018 IPR004114 THUMP domain GO:0003723 XDD1_0860 09284eaaf656a035a9b9ca2b19dba476 482 SUPERFAMILY SSF52821 393 481 1.7E-11 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily XDD1_0860 09284eaaf656a035a9b9ca2b19dba476 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 383 482 1.6E-42 T 15-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 XDD1_0860 09284eaaf656a035a9b9ca2b19dba476 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 3.6E-79 T 15-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 XDD1_0860 09284eaaf656a035a9b9ca2b19dba476 482 SUPERFAMILY SSF52402 174 372 9.48E-43 T 15-10-2018 XDD1_3304 0b26c3ec9e254f8b99f9435a3c56a9f0 242 PIRSF PIRSF005650 4 242 1.2E-89 T 15-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 XDD1_3304 0b26c3ec9e254f8b99f9435a3c56a9f0 242 Gene3D G3DSA:3.40.1160.10 3 241 4.0E-75 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XDD1_3304 0b26c3ec9e254f8b99f9435a3c56a9f0 242 Pfam PF00696 Amino acid kinase family 11 219 2.2E-27 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XDD1_3304 0b26c3ec9e254f8b99f9435a3c56a9f0 242 SUPERFAMILY SSF53633 7 240 5.89E-72 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XDD1_3304 0b26c3ec9e254f8b99f9435a3c56a9f0 242 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.4E-103 T 15-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 XDD1_3304 0b26c3ec9e254f8b99f9435a3c56a9f0 242 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.102 T 15-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 12 329 39.568 T 15-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 Pfam PF04545 Sigma-70, region 4 263 315 9.3E-15 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 Gene3D G3DSA:1.10.601.10 3 164 4.4E-46 T 15-10-2018 XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 SUPERFAMILY SSF88946 57 165 1.7E-45 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 Gene3D G3DSA:1.10.10.10 245 321 1.8E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 Pfam PF04539 Sigma-70 region 3 175 248 1.3E-20 T 15-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 Pfam PF04542 Sigma-70 region 2 95 164 8.1E-20 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 288 314 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 SUPERFAMILY SSF88659 226 324 1.83E-22 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 PRINTS PR00046 Major sigma-70 factor signature 303 314 2.5E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 PRINTS PR00046 Major sigma-70 factor signature 119 132 2.5E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 PRINTS PR00046 Major sigma-70 factor signature 143 151 2.5E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 PRINTS PR00046 Major sigma-70 factor signature 288 303 2.5E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 PRINTS PR00046 Major sigma-70 factor signature 267 279 2.5E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 52 329 8.8E-142 T 15-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 Gene3D G3DSA:1.10.10.10 168 243 3.6E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 SUPERFAMILY SSF88659 168 242 5.23E-15 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 91 317 5.9E-34 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 119 132 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3158 7e35c93e0b6081c4ae125e23b286f07d 331 Pfam PF00140 Sigma-70 factor, region 1.2 57 89 4.8E-11 T 15-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XDD1_2554 3892b4edebdba5d1770a1c4342eef65f 144 Gene3D G3DSA:1.10.530.40 2 144 1.7E-51 T 15-10-2018 XDD1_2554 3892b4edebdba5d1770a1c4342eef65f 144 SUPERFAMILY SSF53955 1 144 3.79E-48 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily XDD1_2554 3892b4edebdba5d1770a1c4342eef65f 144 Pfam PF00959 Phage lysozyme 32 136 4.8E-22 T 15-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XDD1_1164 2065c14a7e5b4298503c42f5d5b3ff2d 309 SUPERFAMILY SSF46785 3 85 3.73E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1164 2065c14a7e5b4298503c42f5d5b3ff2d 309 Gene3D G3DSA:1.10.10.10 5 95 1.8E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1164 2065c14a7e5b4298503c42f5d5b3ff2d 309 Pfam PF03466 LysR substrate binding domain 92 296 2.3E-35 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_1164 2065c14a7e5b4298503c42f5d5b3ff2d 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.4E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_1164 2065c14a7e5b4298503c42f5d5b3ff2d 309 SUPERFAMILY SSF53850 94 297 2.48E-36 T 15-10-2018 XDD1_1164 2065c14a7e5b4298503c42f5d5b3ff2d 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.4E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_1164 2065c14a7e5b4298503c42f5d5b3ff2d 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.4E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_1164 2065c14a7e5b4298503c42f5d5b3ff2d 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.4E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_1164 2065c14a7e5b4298503c42f5d5b3ff2d 309 Gene3D G3DSA:3.40.190.290 96 302 4.4E-34 T 15-10-2018 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 Gene3D G3DSA:1.10.1440.20 608 667 6.9E-19 T 15-10-2018 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 Pfam PF00694 Aconitase C-terminal domain 707 834 1.2E-49 T 15-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 SUPERFAMILY SSF53732 26 642 1.83E-223 T 15-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 Gene3D G3DSA:3.30.499.20 23 388 2.4E-160 T 15-10-2018 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 Pfam PF00330 Aconitase family (aconitate hydratase) 85 578 6.9E-183 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 Gene3D G3DSA:3.30.499.10 389 606 1.1E-100 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 ProSitePatterns PS00450 Aconitase family signature 1. 443 459 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 ProSitePatterns PS01244 Aconitase family signature 2. 509 522 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 SUPERFAMILY SSF52016 646 906 3.73E-89 T 15-10-2018 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 Gene3D G3DSA:3.20.19.10 668 907 1.2E-106 T 15-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 34 906 0.0 T 15-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 PRINTS PR00415 Aconitase family signature 388 402 2.7E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 PRINTS PR00415 Aconitase family signature 162 175 2.7E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 PRINTS PR00415 Aconitase family signature 447 458 2.7E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 PRINTS PR00415 Aconitase family signature 219 232 2.7E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 PRINTS PR00415 Aconitase family signature 509 522 2.7E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 PRINTS PR00415 Aconitase family signature 186 194 2.7E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 PRINTS PR00415 Aconitase family signature 309 322 2.7E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 PRINTS PR00415 Aconitase family signature 295 308 2.7E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XDD1_2203 df7aa06b8b9a70a3d5ca3a10166451b1 907 PRINTS PR00415 Aconitase family signature 233 248 2.7E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XDD1_3146 1191977cbce374a62964dc19152821f6 362 Gene3D G3DSA:3.30.428.10 46 177 2.3E-55 T 15-10-2018 IPR036265 HIT-like superfamily XDD1_3146 1191977cbce374a62964dc19152821f6 362 Gene3D G3DSA:3.30.428.10 178 361 1.1E-68 T 15-10-2018 IPR036265 HIT-like superfamily XDD1_3146 1191977cbce374a62964dc19152821f6 362 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 5 358 2.6E-160 T 15-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 XDD1_3146 1191977cbce374a62964dc19152821f6 362 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 11 178 1.4E-63 T 15-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 XDD1_3146 1191977cbce374a62964dc19152821f6 362 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 15-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 XDD1_3146 1191977cbce374a62964dc19152821f6 362 SUPERFAMILY SSF54197 182 357 5.44E-52 T 15-10-2018 IPR036265 HIT-like superfamily XDD1_3146 1191977cbce374a62964dc19152821f6 362 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 359 3.1E-59 T 15-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 XDD1_3146 1191977cbce374a62964dc19152821f6 362 PIRSF PIRSF000808 3 354 2.1E-119 T 15-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 XDD1_3146 1191977cbce374a62964dc19152821f6 362 SUPERFAMILY SSF54197 6 179 1.24E-70 T 15-10-2018 IPR036265 HIT-like superfamily XDD1_0039 1365218c1b37f58fc31c0b45ebb40eac 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 15-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0039 1365218c1b37f58fc31c0b45ebb40eac 79 Gene3D G3DSA:1.20.20.10 1 78 3.9E-32 T 15-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0039 1365218c1b37f58fc31c0b45ebb40eac 79 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.4E-8 T 15-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0039 1365218c1b37f58fc31c0b45ebb40eac 79 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.4E-8 T 15-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0039 1365218c1b37f58fc31c0b45ebb40eac 79 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.4E-8 T 15-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0039 1365218c1b37f58fc31c0b45ebb40eac 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 14.529 T 15-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0039 1365218c1b37f58fc31c0b45ebb40eac 79 SUPERFAMILY SSF81333 3 76 3.79E-18 T 15-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily XDD1_0039 1365218c1b37f58fc31c0b45ebb40eac 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 4.5E-31 T 15-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 XDD1_0039 1365218c1b37f58fc31c0b45ebb40eac 79 Pfam PF00137 ATP synthase subunit C 10 72 2.7E-9 T 15-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 XDD1_3168 559e576164dbb6dd087850ef16630068 480 Gene3D G3DSA:2.40.30.10 337 440 2.5E-27 T 15-10-2018 XDD1_3168 559e576164dbb6dd087850ef16630068 480 SUPERFAMILY SSF52540 26 240 1.34E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3168 559e576164dbb6dd087850ef16630068 480 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 33 439 1.5E-194 T 15-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XDD1_3168 559e576164dbb6dd087850ef16630068 480 Gene3D G3DSA:2.40.30.10 247 334 2.5E-23 T 15-10-2018 XDD1_3168 559e576164dbb6dd087850ef16630068 480 SUPERFAMILY SSF50465 338 440 7.19E-26 T 15-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal XDD1_3168 559e576164dbb6dd087850ef16630068 480 Gene3D G3DSA:3.40.50.300 11 245 1.5E-69 T 15-10-2018 XDD1_3168 559e576164dbb6dd087850ef16630068 480 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 24 480 52.08 T 15-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XDD1_3168 559e576164dbb6dd087850ef16630068 480 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 88 103 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site XDD1_3168 559e576164dbb6dd087850ef16630068 480 PRINTS PR00315 GTP-binding elongation factor signature 34 47 3.8E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3168 559e576164dbb6dd087850ef16630068 480 PRINTS PR00315 GTP-binding elongation factor signature 131 142 3.8E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3168 559e576164dbb6dd087850ef16630068 480 PRINTS PR00315 GTP-binding elongation factor signature 95 103 3.8E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3168 559e576164dbb6dd087850ef16630068 480 PRINTS PR00315 GTP-binding elongation factor signature 115 125 3.8E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3168 559e576164dbb6dd087850ef16630068 480 PRINTS PR00315 GTP-binding elongation factor signature 168 177 3.8E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3168 559e576164dbb6dd087850ef16630068 480 SUPERFAMILY SSF50447 247 334 5.52E-23 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XDD1_3168 559e576164dbb6dd087850ef16630068 480 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 39 219 3.3E-14 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XDD1_3168 559e576164dbb6dd087850ef16630068 480 Pfam PF00009 Elongation factor Tu GTP binding domain 33 232 9.0E-42 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_1410 368e90a8983743c44f4289d2b953565f 578 Pfam PF00005 ABC transporter 27 167 3.5E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1410 368e90a8983743c44f4289d2b953565f 578 SMART SM00382 356 546 7.8E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1410 368e90a8983743c44f4289d2b953565f 578 SMART SM00382 34 268 1.6E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1410 368e90a8983743c44f4289d2b953565f 578 Pfam PF00005 ABC transporter 348 491 2.4E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1410 368e90a8983743c44f4289d2b953565f 578 SUPERFAMILY SSF52540 13 228 6.21E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1410 368e90a8983743c44f4289d2b953565f 578 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_1410 368e90a8983743c44f4289d2b953565f 578 SUPERFAMILY SSF52540 316 551 7.5E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1410 368e90a8983743c44f4289d2b953565f 578 Gene3D G3DSA:3.40.50.300 325 558 9.7E-62 T 15-10-2018 XDD1_1410 368e90a8983743c44f4289d2b953565f 578 Gene3D G3DSA:3.40.50.300 1 233 1.2E-57 T 15-10-2018 XDD1_3061 ea4fa86eb74509243d794106cfcaec16 717 Pfam PF02554 Carbon starvation protein CstA 34 406 3.0E-161 T 15-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 XDD1_3061 ea4fa86eb74509243d794106cfcaec16 717 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 486 614 1.6E-34 T 15-10-2018 IPR025299 CstA, C-terminal domain XDD1_1766 058a81a2dbd0505513c1780aa752bcb8 81 Gene3D G3DSA:3.30.420.470 2 71 1.7E-7 T 15-10-2018 XDD1_1766 058a81a2dbd0505513c1780aa752bcb8 81 Pfam PF13358 DDE superfamily endonuclease 3 52 1.7E-12 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2750 ec2878a0a1db56bd1f3c13fb9a13542a 178 Pfam PF04586 Caudovirus prohead serine protease 9 163 1.9E-45 T 15-10-2018 IPR006433 Prohead protease XDD1_2750 ec2878a0a1db56bd1f3c13fb9a13542a 178 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 18 160 3.7E-38 T 15-10-2018 IPR006433 Prohead protease XDD1_1347 345c43f3d1451a062562cb5722c1fb92 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 360 7.4E-107 T 15-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 XDD1_1347 345c43f3d1451a062562cb5722c1fb92 379 PIRSF PIRSF000267 2 378 2.8E-128 T 15-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 XDD1_1347 345c43f3d1451a062562cb5722c1fb92 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 2.5E-191 T 15-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 XDD1_0145 9a83198cac8c2526d9506b59d61e1762 349 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 323 5.9E-80 T 15-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 XDD1_0145 9a83198cac8c2526d9506b59d61e1762 349 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 343 1.9E-161 T 15-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 XDD1_0145 9a83198cac8c2526d9506b59d61e1762 349 Gene3D G3DSA:3.40.50.2000 1 150 1.5E-59 T 15-10-2018 XDD1_0145 9a83198cac8c2526d9506b59d61e1762 349 Gene3D G3DSA:3.40.50.2000 163 348 1.9E-64 T 15-10-2018 XDD1_0145 9a83198cac8c2526d9506b59d61e1762 349 SUPERFAMILY SSF53756 1 344 1.99E-98 T 15-10-2018 XDD1_0273 b5cc2614a05f4a68b70ec8ba4e5e06a6 319 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 80 317 5.3E-73 T 15-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XDD1_0273 b5cc2614a05f4a68b70ec8ba4e5e06a6 319 SUPERFAMILY SSF55681 70 268 3.4E-58 T 15-10-2018 XDD1_0273 b5cc2614a05f4a68b70ec8ba4e5e06a6 319 Pfam PF02237 Biotin protein ligase C terminal domain 271 317 3.0E-11 T 15-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XDD1_0273 b5cc2614a05f4a68b70ec8ba4e5e06a6 319 Pfam PF08279 HTH domain 10 59 3.5E-11 T 15-10-2018 IPR013196 Helix-turn-helix, type 11 XDD1_0273 b5cc2614a05f4a68b70ec8ba4e5e06a6 319 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 1.9E-22 T 15-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 XDD1_0273 b5cc2614a05f4a68b70ec8ba4e5e06a6 319 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.043 T 15-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 XDD1_0273 b5cc2614a05f4a68b70ec8ba4e5e06a6 319 Gene3D G3DSA:3.30.930.10 65 270 8.0E-72 T 15-10-2018 XDD1_0273 b5cc2614a05f4a68b70ec8ba4e5e06a6 319 Gene3D G3DSA:2.30.30.100 271 313 4.8E-23 T 15-10-2018 XDD1_0273 b5cc2614a05f4a68b70ec8ba4e5e06a6 319 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 7 72 1.4E-20 T 15-10-2018 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 XDD1_0273 b5cc2614a05f4a68b70ec8ba4e5e06a6 319 SUPERFAMILY SSF46785 5 60 3.27E-10 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_0273 b5cc2614a05f4a68b70ec8ba4e5e06a6 319 SUPERFAMILY SSF50037 271 317 5.04E-11 T 15-10-2018 IPR008988 Transcriptional repressor, C-terminal XDD1_0273 b5cc2614a05f4a68b70ec8ba4e5e06a6 319 Gene3D G3DSA:1.10.10.10 1 64 6.0E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1695 d14bdc106ac0b404bf48e2c169291bd2 87 Gene3D G3DSA:1.10.260.40 1 71 7.5E-34 T 15-10-2018 XDD1_1695 d14bdc106ac0b404bf48e2c169291bd2 87 SUPERFAMILY SSF47413 2 73 1.43E-31 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_1695 d14bdc106ac0b404bf48e2c169291bd2 87 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 80 5.3E-39 T 15-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain XDD1_3339 841cc3ef4fd380b96eee8c7fd4df5bb7 683 SUPERFAMILY SSF52317 1 193 4.27E-56 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_3339 841cc3ef4fd380b96eee8c7fd4df5bb7 683 Gene3D G3DSA:3.60.120.10 208 678 1.8E-140 T 15-10-2018 IPR005801 ADC synthase GO:0009058 XDD1_3339 841cc3ef4fd380b96eee8c7fd4df5bb7 683 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 323 670 1.0E-104 T 15-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 XDD1_3339 841cc3ef4fd380b96eee8c7fd4df5bb7 683 Pfam PF00117 Glutamine amidotransferase class-I 4 185 5.4E-50 T 15-10-2018 IPR017926 Glutamine amidotransferase XDD1_3339 841cc3ef4fd380b96eee8c7fd4df5bb7 683 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 3 186 5.8E-45 T 15-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XDD1_3339 841cc3ef4fd380b96eee8c7fd4df5bb7 683 Pfam PF04715 Anthranilate synthase component I, N terminal region 232 366 4.0E-20 T 15-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XDD1_3339 841cc3ef4fd380b96eee8c7fd4df5bb7 683 Gene3D G3DSA:3.40.50.880 1 200 5.8E-65 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_3339 841cc3ef4fd380b96eee8c7fd4df5bb7 683 SUPERFAMILY SSF56322 224 671 1.44E-126 T 15-10-2018 IPR005801 ADC synthase GO:0009058 XDD1_3339 841cc3ef4fd380b96eee8c7fd4df5bb7 683 PRINTS PR00097 Anthranilate synthase component II signature 121 133 4.9E-27 T 15-10-2018 XDD1_3339 841cc3ef4fd380b96eee8c7fd4df5bb7 683 PRINTS PR00097 Anthranilate synthase component II signature 3 17 4.9E-27 T 15-10-2018 XDD1_3339 841cc3ef4fd380b96eee8c7fd4df5bb7 683 PRINTS PR00097 Anthranilate synthase component II signature 48 57 4.9E-27 T 15-10-2018 XDD1_3339 841cc3ef4fd380b96eee8c7fd4df5bb7 683 PRINTS PR00097 Anthranilate synthase component II signature 164 177 4.9E-27 T 15-10-2018 XDD1_3339 841cc3ef4fd380b96eee8c7fd4df5bb7 683 PRINTS PR00097 Anthranilate synthase component II signature 76 87 4.9E-27 T 15-10-2018 XDD1_3339 841cc3ef4fd380b96eee8c7fd4df5bb7 683 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 76 92 2.4E-7 T 15-10-2018 XDD1_3339 841cc3ef4fd380b96eee8c7fd4df5bb7 683 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 45 59 2.4E-7 T 15-10-2018 XDD1_3339 841cc3ef4fd380b96eee8c7fd4df5bb7 683 Pfam PF00425 chorismate binding enzyme 413 668 1.0E-91 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal XDD1_3339 841cc3ef4fd380b96eee8c7fd4df5bb7 683 PRINTS PR00096 Glutamine amidotransferase superfamily signature 76 87 1.9E-12 T 15-10-2018 XDD1_3339 841cc3ef4fd380b96eee8c7fd4df5bb7 683 PRINTS PR00096 Glutamine amidotransferase superfamily signature 48 57 1.9E-12 T 15-10-2018 XDD1_3339 841cc3ef4fd380b96eee8c7fd4df5bb7 683 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 1.9E-12 T 15-10-2018 XDD1_0076 ad9f0a4764bea42485ccfdb309f4bb85 843 Pfam PF00905 Penicillin binding protein transpeptidase domain 428 603 4.2E-22 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XDD1_0076 ad9f0a4764bea42485ccfdb309f4bb85 843 Gene3D G3DSA:3.40.710.10 651 825 9.8E-27 T 15-10-2018 XDD1_0076 ad9f0a4764bea42485ccfdb309f4bb85 843 Gene3D G3DSA:3.40.710.10 390 640 3.8E-63 T 15-10-2018 XDD1_0076 ad9f0a4764bea42485ccfdb309f4bb85 843 Gene3D G3DSA:1.10.3810.10 49 242 4.0E-79 T 15-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_0076 ad9f0a4764bea42485ccfdb309f4bb85 843 SUPERFAMILY SSF56601 211 826 9.58E-112 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XDD1_0076 ad9f0a4764bea42485ccfdb309f4bb85 843 SUPERFAMILY SSF53955 43 257 4.22E-80 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily XDD1_0076 ad9f0a4764bea42485ccfdb309f4bb85 843 Pfam PF17092 Penicillin-binding protein OB-like domain 316 425 1.1E-27 T 15-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_0076 ad9f0a4764bea42485ccfdb309f4bb85 843 Gene3D G3DSA:3.40.710.10 243 379 2.8E-9 T 15-10-2018 XDD1_0076 ad9f0a4764bea42485ccfdb309f4bb85 843 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 66 778 6.7E-170 T 15-10-2018 XDD1_0076 ad9f0a4764bea42485ccfdb309f4bb85 843 Pfam PF00912 Transglycosylase 55 229 1.7E-64 T 15-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 19 898 0.0 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 613 728 2.1E-29 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 242 584 1.4E-26 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 Gene3D G3DSA:1.20.1110.10 659 895 7.5E-24 T 15-10-2018 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 Gene3D G3DSA:3.40.50.1000 546 658 2.7E-5 T 15-10-2018 IPR023214 HAD superfamily XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 Pfam PF00689 Cation transporting ATPase, C-terminus 722 890 1.9E-16 T 15-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 PRINTS PR01836 Magnesium-transporting ATPase signature 697 712 4.8E-86 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 PRINTS PR01836 Magnesium-transporting ATPase signature 802 823 4.8E-86 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 PRINTS PR01836 Magnesium-transporting ATPase signature 282 298 4.8E-86 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 PRINTS PR01836 Magnesium-transporting ATPase signature 767 783 4.8E-86 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 PRINTS PR01836 Magnesium-transporting ATPase signature 852 873 4.8E-86 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 PRINTS PR01836 Magnesium-transporting ATPase signature 299 318 4.8E-86 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 PRINTS PR01836 Magnesium-transporting ATPase signature 403 416 4.8E-86 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 PRINTS PR01836 Magnesium-transporting ATPase signature 715 726 4.8E-86 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 PRINTS PR01836 Magnesium-transporting ATPase signature 747 760 4.8E-86 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 Gene3D G3DSA:1.20.1110.10 73 144 2.9E-5 T 15-10-2018 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 Pfam PF00690 Cation transporter/ATPase, N-terminus 25 90 8.6E-14 T 15-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 Gene3D G3DSA:2.70.150.20 145 234 1.1E-12 T 15-10-2018 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 371 377 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 Gene3D G3DSA:1.20.1110.10 235 383 2.6E-30 T 15-10-2018 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 SUPERFAMILY SSF81653 157 269 5.1E-25 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 Pfam PF00702 haloacid dehalogenase-like hydrolase 365 653 6.8E-17 T 15-10-2018 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 Gene3D G3DSA:3.40.1110.10 384 545 3.7E-52 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 SUPERFAMILY SSF56784 367 738 2.8E-37 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 Pfam PF00122 E1-E2 ATPase 143 349 7.8E-41 T 15-10-2018 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 SMART SM00831 22 95 2.6E-16 T 15-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 XDD1_2379 54d36e42ed1696d6b5df2d807dcb4b56 899 SUPERFAMILY SSF81665 25 896 3.53E-98 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 XDD1_3762 27ff6e0ac11f83abcac79ba4a43c9e4c 610 PIRSF PIRSF028304 1 610 8.6E-184 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like XDD1_3762 27ff6e0ac11f83abcac79ba4a43c9e4c 610 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 3 610 1.0E-196 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like XDD1_3762 27ff6e0ac11f83abcac79ba4a43c9e4c 610 Pfam PF05947 Type VI secretion system, TssF 5 608 5.0E-198 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like XDD1_0898 6fc11a3451746203f0f3bbe8ae06df13 399 Pfam PF00529 HlyD membrane-fusion protein of T1SS 297 363 3.9E-10 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 XDD1_0898 6fc11a3451746203f0f3bbe8ae06df13 399 Gene3D G3DSA:2.40.420.20 307 376 1.1E-110 T 15-10-2018 XDD1_0898 6fc11a3451746203f0f3bbe8ae06df13 399 Gene3D G3DSA:2.40.30.170 55 306 1.1E-110 T 15-10-2018 XDD1_0898 6fc11a3451746203f0f3bbe8ae06df13 399 Gene3D G3DSA:2.40.50.100 67 211 1.1E-110 T 15-10-2018 XDD1_0898 6fc11a3451746203f0f3bbe8ae06df13 399 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 296 8.2E-12 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XDD1_0898 6fc11a3451746203f0f3bbe8ae06df13 399 Gene3D G3DSA:1.10.287.470 102 175 1.1E-110 T 15-10-2018 XDD1_0898 6fc11a3451746203f0f3bbe8ae06df13 399 SUPERFAMILY SSF111369 55 303 1.7E-85 T 15-10-2018 XDD1_0898 6fc11a3451746203f0f3bbe8ae06df13 399 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 378 2.0E-80 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 XDD1_0912 c4c8994e7c235bb5701cb19e07c43e14 320 Gene3D G3DSA:3.40.50.1400 162 300 2.1E-89 T 15-10-2018 XDD1_0912 c4c8994e7c235bb5701cb19e07c43e14 320 Pfam PF00762 Ferrochelatase 5 317 5.6E-105 T 15-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 XDD1_0912 c4c8994e7c235bb5701cb19e07c43e14 320 Gene3D G3DSA:3.40.50.1400 7 317 2.1E-89 T 15-10-2018 XDD1_0912 c4c8994e7c235bb5701cb19e07c43e14 320 SUPERFAMILY SSF53800 4 319 1.09E-98 T 15-10-2018 XDD1_0912 c4c8994e7c235bb5701cb19e07c43e14 320 TIGRFAM TIGR00109 hemH: ferrochelatase 2 317 2.4E-105 T 15-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 XDD1_0912 c4c8994e7c235bb5701cb19e07c43e14 320 Hamap MF_00323 Ferrochelatase [hemH]. 4 319 36.671 T 15-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 XDD1_0912 c4c8994e7c235bb5701cb19e07c43e14 320 ProSitePatterns PS00534 Ferrochelatase signature. 188 206 - T 15-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 XDD1_2336 d0126d2124cf468219ee6bbdcf82bfae 402 Pfam PF00460 Flagella basal body rod protein 4 33 7.7E-9 T 15-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 XDD1_2336 d0126d2124cf468219ee6bbdcf82bfae 402 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 384 5.6E-93 T 15-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G XDD1_2336 d0126d2124cf468219ee6bbdcf82bfae 402 SUPERFAMILY SSF117143 73 363 2.09E-77 T 15-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like XDD1_2336 d0126d2124cf468219ee6bbdcf82bfae 402 Pfam PF07559 Flagellar basal body protein FlaE 172 283 5.3E-17 T 15-10-2018 IPR011491 Flagellar hook protein FlgE XDD1_2336 d0126d2124cf468219ee6bbdcf82bfae 402 Gene3D G3DSA:2.60.98.20 144 284 2.9E-35 T 15-10-2018 IPR037058 Flagellar hook protein FlgE superfamily XDD1_2336 d0126d2124cf468219ee6bbdcf82bfae 402 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 15-10-2018 IPR019776 Flagellar basal body rod protein, conserved site XDD1_2336 d0126d2124cf468219ee6bbdcf82bfae 402 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 324 401 2.1E-20 T 15-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain XDD1_3017 b35748f3d9fc3bde9b5e4138ad63b603 487 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 42.951 T 15-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XDD1_3017 b35748f3d9fc3bde9b5e4138ad63b603 487 SUPERFAMILY SSF53244 323 476 2.93E-47 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XDD1_3017 b35748f3d9fc3bde9b5e4138ad63b603 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 418 2.0E-21 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 XDD1_3017 b35748f3d9fc3bde9b5e4138ad63b603 487 Pfam PF01225 Mur ligase family, catalytic domain 21 119 5.5E-30 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 XDD1_3017 b35748f3d9fc3bde9b5e4138ad63b603 487 Gene3D G3DSA:3.40.1190.10 108 324 3.0E-84 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XDD1_3017 b35748f3d9fc3bde9b5e4138ad63b603 487 Pfam PF08245 Mur ligase middle domain 124 304 3.4E-26 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XDD1_3017 b35748f3d9fc3bde9b5e4138ad63b603 487 Gene3D G3DSA:3.90.190.20 325 484 5.0E-51 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XDD1_3017 b35748f3d9fc3bde9b5e4138ad63b603 487 Gene3D G3DSA:3.40.50.720 20 107 1.2E-32 T 15-10-2018 XDD1_3017 b35748f3d9fc3bde9b5e4138ad63b603 487 SUPERFAMILY SSF53623 105 322 1.3E-71 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XDD1_3017 b35748f3d9fc3bde9b5e4138ad63b603 487 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 1.3E-181 T 15-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XDD1_3017 b35748f3d9fc3bde9b5e4138ad63b603 487 SUPERFAMILY SSF51984 20 106 1.28E-28 T 15-10-2018 XDD1_2685 eb45c75c366386b383f4ab24d91c5476 497 SUPERFAMILY SSF51905 4 350 3.84E-63 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_2685 eb45c75c366386b383f4ab24d91c5476 497 Gene3D G3DSA:3.40.30.120 382 485 4.3E-7 T 15-10-2018 XDD1_2685 eb45c75c366386b383f4ab24d91c5476 497 Pfam PF01494 FAD binding domain 5 329 5.9E-72 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 XDD1_2685 eb45c75c366386b383f4ab24d91c5476 497 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 336 3.7E-40 T 15-10-2018 XDD1_2685 eb45c75c366386b383f4ab24d91c5476 497 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 269 284 3.7E-40 T 15-10-2018 XDD1_2685 eb45c75c366386b383f4ab24d91c5476 497 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 149 164 3.7E-40 T 15-10-2018 XDD1_2685 eb45c75c366386b383f4ab24d91c5476 497 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.7E-40 T 15-10-2018 XDD1_2685 eb45c75c366386b383f4ab24d91c5476 497 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 320 3.7E-40 T 15-10-2018 XDD1_2685 eb45c75c366386b383f4ab24d91c5476 497 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 300 3.7E-40 T 15-10-2018 XDD1_2685 eb45c75c366386b383f4ab24d91c5476 497 Gene3D G3DSA:3.50.50.60 7 328 2.3E-100 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_2685 eb45c75c366386b383f4ab24d91c5476 497 Gene3D G3DSA:3.30.70.2450 178 258 2.3E-100 T 15-10-2018 XDD1_0480 a3000e76467a5e16c5dadbecf7524f58 317 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 218 5.9E-87 T 15-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_0480 a3000e76467a5e16c5dadbecf7524f58 317 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 3.1E-24 T 15-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 XDD1_0480 a3000e76467a5e16c5dadbecf7524f58 317 Gene3D G3DSA:2.30.130.10 249 314 5.0E-23 T 15-10-2018 IPR036974 PUA domain superfamily GO:0003723 XDD1_0480 a3000e76467a5e16c5dadbecf7524f58 317 SUPERFAMILY SSF88697 250 310 1.64E-13 T 15-10-2018 IPR015947 PUA-like superfamily XDD1_0480 a3000e76467a5e16c5dadbecf7524f58 317 Gene3D G3DSA:3.30.2350.10 2 248 2.9E-94 T 15-10-2018 XDD1_0480 a3000e76467a5e16c5dadbecf7524f58 317 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 309 18.398 T 15-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_0480 a3000e76467a5e16c5dadbecf7524f58 317 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 309 4.4E-19 T 15-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_0480 a3000e76467a5e16c5dadbecf7524f58 317 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 9.5E-58 T 15-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 XDD1_0480 a3000e76467a5e16c5dadbecf7524f58 317 SUPERFAMILY SSF55120 9 248 4.89E-83 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_2229 a66f0682e8d41f9c004e818dbccf9857 117 SUPERFAMILY SSF102816 11 117 5.1E-44 T 15-10-2018 IPR036763 Putative dsDNA mimic superfamily XDD1_2229 a66f0682e8d41f9c004e818dbccf9857 117 PIRSF PIRSF004916 9 117 2.8E-48 T 15-10-2018 IPR007376 dsDNA mimic, putative XDD1_2229 a66f0682e8d41f9c004e818dbccf9857 117 Hamap MF_00680 UPF0263 protein YciU [yciU]. 13 117 29.769 T 15-10-2018 IPR007376 dsDNA mimic, putative XDD1_2229 a66f0682e8d41f9c004e818dbccf9857 117 Pfam PF04269 Protein of unknown function, DUF440 16 117 8.6E-42 T 15-10-2018 IPR007376 dsDNA mimic, putative XDD1_2229 a66f0682e8d41f9c004e818dbccf9857 117 Gene3D G3DSA:3.10.450.140 17 117 1.1E-35 T 15-10-2018 IPR036763 Putative dsDNA mimic superfamily XDD1_2229 a66f0682e8d41f9c004e818dbccf9857 117 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 15 117 2.0E-39 T 15-10-2018 IPR007376 dsDNA mimic, putative XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 Gene3D G3DSA:1.10.1200.10 1037 1118 1.3E-21 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 SUPERFAMILY SSF52777 1342 1613 7.89E-46 T 15-10-2018 XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 SUPERFAMILY SSF47336 2131 2204 3.66E-17 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 ProSitePatterns PS00455 Putative AMP-binding domain signature. 673 684 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2163 2178 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 SMART SM00823 Phosphopantetheine attachment site 1048 1116 0.21 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 SMART SM00823 Phosphopantetheine attachment site 2139 2208 0.021 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 SUPERFAMILY SSF56801 1585 2152 1.7E-165 T 15-10-2018 XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 SUPERFAMILY SSF52777 234 508 7.0E-63 T 15-10-2018 XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 SUPERFAMILY SSF52777 39 246 4.56E-50 T 15-10-2018 XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 Gene3D G3DSA:3.30.559.30 1340 1603 2.6E-86 T 15-10-2018 XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 SUPERFAMILY SSF56801 482 1061 7.2E-162 T 15-10-2018 XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 Gene3D G3DSA:3.30.300.30 927 1036 3.8E-35 T 15-10-2018 XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1775 1786 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 SUPERFAMILY SSF52777 1161 1354 3.56E-33 T 15-10-2018 XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 Gene3D G3DSA:3.30.559.10 1168 1537 2.6E-86 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 Gene3D G3DSA:3.30.559.30 230 486 6.3E-152 T 15-10-2018 XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 Pfam PF00550 Phosphopantetheine attachment site 2142 2202 1.0E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 Pfam PF00550 Phosphopantetheine attachment site 1051 1111 8.0E-9 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 SUPERFAMILY SSF47336 1041 1112 3.4E-16 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 Pfam PF00668 Condensation domain 45 501 3.1E-105 T 15-10-2018 IPR001242 Condensation domain XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 Pfam PF00668 Condensation domain 1163 1607 8.9E-53 T 15-10-2018 IPR001242 Condensation domain XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 Gene3D G3DSA:3.30.559.10 46 420 6.3E-152 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1652 2057 5.9E-138 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 542 957 1.4E-138 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 Pfam PF00501 AMP-binding enzyme 1631 2033 3.9E-105 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 Pfam PF00501 AMP-binding enzyme 522 933 1.8E-108 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 Gene3D G3DSA:3.30.300.30 2028 2129 1.6E-33 T 15-10-2018 XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 Gene3D G3DSA:3.40.50.12780 1621 2025 1.7E-149 T 15-10-2018 XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 Gene3D G3DSA:3.40.50.12780 511 925 3.7E-149 T 15-10-2018 XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 Gene3D G3DSA:3.40.50.1820 2130 2235 1.6E-23 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 Pfam PF13193 AMP-binding enzyme C-terminal domain 941 1021 2.4E-12 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2282 8a7f4b8d39c05c3254892793d2a9a957 2242 Pfam PF13193 AMP-binding enzyme C-terminal domain 2041 2112 4.1E-12 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2600 50a90d123754fa133e9f2cf6d6df54cd 609 Gene3D G3DSA:3.30.70.1450 322 395 1.3E-14 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 XDD1_2600 50a90d123754fa133e9f2cf6d6df54cd 609 Pfam PF02080 TrkA-C domain 230 297 5.2E-14 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 XDD1_2600 50a90d123754fa133e9f2cf6d6df54cd 609 Pfam PF02080 TrkA-C domain 325 392 5.9E-10 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 XDD1_2600 50a90d123754fa133e9f2cf6d6df54cd 609 SUPERFAMILY SSF116726 318 392 1.29E-16 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 XDD1_2600 50a90d123754fa133e9f2cf6d6df54cd 609 SUPERFAMILY SSF116726 231 289 9.42E-10 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 XDD1_2600 50a90d123754fa133e9f2cf6d6df54cd 609 Gene3D G3DSA:3.30.70.1450 218 301 5.7E-14 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 XDD1_2600 50a90d123754fa133e9f2cf6d6df54cd 609 Pfam PF03600 Citrate transporter 429 606 2.7E-18 T 15-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 XDD1_2600 50a90d123754fa133e9f2cf6d6df54cd 609 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 557 573 - T 15-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 XDD1_2600 50a90d123754fa133e9f2cf6d6df54cd 609 Pfam PF03600 Citrate transporter 16 197 1.0E-36 T 15-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 XDD1_0153 3380c6e45abd592c137f1cf10b448f9d 98 Pfam PF01381 Helix-turn-helix 22 68 1.0E-8 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_0153 3380c6e45abd592c137f1cf10b448f9d 98 Gene3D G3DSA:1.10.260.40 8 81 3.1E-15 T 15-10-2018 XDD1_0153 3380c6e45abd592c137f1cf10b448f9d 98 SUPERFAMILY SSF47413 7 68 3.22E-9 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_0153 3380c6e45abd592c137f1cf10b448f9d 98 SMART SM00530 20 70 2.9E-4 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_2065 c5206e9f00fff2b565aa93952115c081 205 SUPERFAMILY SSF50249 2 63 4.17E-18 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_2065 c5206e9f00fff2b565aa93952115c081 205 Gene3D G3DSA:1.10.150.20 67 142 2.7E-29 T 15-10-2018 XDD1_2065 c5206e9f00fff2b565aa93952115c081 205 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 205 2.7E-67 T 15-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 XDD1_2065 c5206e9f00fff2b565aa93952115c081 205 Gene3D G3DSA:1.10.8.10 158 205 1.0E-22 T 15-10-2018 XDD1_2065 c5206e9f00fff2b565aa93952115c081 205 SUPERFAMILY SSF46929 161 203 5.76E-10 T 15-10-2018 IPR036267 RuvA, C-terminal domain superfamily XDD1_2065 c5206e9f00fff2b565aa93952115c081 205 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 205 32.306 T 15-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 XDD1_2065 c5206e9f00fff2b565aa93952115c081 205 Gene3D G3DSA:2.40.50.140 1 66 5.5E-27 T 15-10-2018 XDD1_2065 c5206e9f00fff2b565aa93952115c081 205 SUPERFAMILY SSF47781 66 136 1.11E-21 T 15-10-2018 IPR010994 RuvA domain 2-like XDD1_2065 c5206e9f00fff2b565aa93952115c081 205 Pfam PF14520 Helix-hairpin-helix domain 72 130 2.8E-16 T 15-10-2018 XDD1_2065 c5206e9f00fff2b565aa93952115c081 205 Pfam PF07499 RuvA, C-terminal domain 163 203 6.1E-15 T 15-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 XDD1_2065 c5206e9f00fff2b565aa93952115c081 205 SMART SM00278 73 92 0.054 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XDD1_2065 c5206e9f00fff2b565aa93952115c081 205 SMART SM00278 108 127 0.13 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XDD1_2065 c5206e9f00fff2b565aa93952115c081 205 Pfam PF01330 RuvA N terminal domain 2 62 2.6E-19 T 15-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 XDD1_1532 3bd0eb8ced87f9446cefa11294b2ef89 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 7.9E-16 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 XDD1_1532 3bd0eb8ced87f9446cefa11294b2ef89 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 152 165 7.9E-16 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 XDD1_1532 3bd0eb8ced87f9446cefa11294b2ef89 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 125 142 7.9E-16 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 XDD1_1532 3bd0eb8ced87f9446cefa11294b2ef89 401 Gene3D G3DSA:3.40.710.10 25 285 1.1E-91 T 15-10-2018 XDD1_1532 3bd0eb8ced87f9446cefa11294b2ef89 401 Gene3D G3DSA:2.60.410.10 286 377 8.5E-24 T 15-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XDD1_1532 3bd0eb8ced87f9446cefa11294b2ef89 401 SUPERFAMILY SSF56601 10 286 9.48E-80 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XDD1_1532 3bd0eb8ced87f9446cefa11294b2ef89 401 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 266 6.1E-97 T 15-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 XDD1_1532 3bd0eb8ced87f9446cefa11294b2ef89 401 SMART SM00936 286 377 8.4E-29 T 15-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XDD1_1532 3bd0eb8ced87f9446cefa11294b2ef89 401 SUPERFAMILY SSF69189 286 379 1.37E-21 T 15-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XDD1_1532 3bd0eb8ced87f9446cefa11294b2ef89 401 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 286 377 2.3E-22 T 15-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XDD1_0132 f1f6685fb8fc992ab7b36d8a6a01167f 273 Gene3D G3DSA:1.10.8.50 131 273 2.1E-47 T 15-10-2018 XDD1_0132 f1f6685fb8fc992ab7b36d8a6a01167f 273 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 273 42.784 T 15-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 XDD1_0132 f1f6685fb8fc992ab7b36d8a6a01167f 273 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 272 1.8E-101 T 15-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 XDD1_0132 f1f6685fb8fc992ab7b36d8a6a01167f 273 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 3.2E-28 T 15-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 XDD1_0132 f1f6685fb8fc992ab7b36d8a6a01167f 273 Pfam PF06827 Zinc finger found in FPG and IleRS 241 273 2.6E-5 T 15-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 XDD1_0132 f1f6685fb8fc992ab7b36d8a6a01167f 273 SMART SM01232 129 221 1.3E-47 T 15-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 XDD1_0132 f1f6685fb8fc992ab7b36d8a6a01167f 273 SUPERFAMILY SSF46946 130 222 1.3E-30 T 15-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 XDD1_0132 f1f6685fb8fc992ab7b36d8a6a01167f 273 SUPERFAMILY SSF81624 2 138 1.09E-42 T 15-10-2018 IPR035937 MutM-like, N-terminal XDD1_0132 f1f6685fb8fc992ab7b36d8a6a01167f 273 Gene3D G3DSA:3.20.190.10 2 128 7.0E-43 T 15-10-2018 IPR035937 MutM-like, N-terminal XDD1_0132 f1f6685fb8fc992ab7b36d8a6a01167f 273 SMART SM00898 2 115 3.5E-52 T 15-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 XDD1_0132 f1f6685fb8fc992ab7b36d8a6a01167f 273 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 7.2E-33 T 15-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 XDD1_0132 f1f6685fb8fc992ab7b36d8a6a01167f 273 SUPERFAMILY SSF57716 217 272 1.68E-14 T 15-10-2018 XDD1_1731 9a35e6f1ba2fe3aba33958f42428f84e 326 Pfam PF03610 PTS system fructose IIA component 5 116 2.4E-34 T 15-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 XDD1_1731 9a35e6f1ba2fe3aba33958f42428f84e 326 SUPERFAMILY SSF53062 3 128 7.33E-37 T 15-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 XDD1_1731 9a35e6f1ba2fe3aba33958f42428f84e 326 Gene3D G3DSA:3.40.50.510 2 134 2.2E-41 T 15-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 XDD1_1731 9a35e6f1ba2fe3aba33958f42428f84e 326 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 3 116 4.9E-42 T 15-10-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 XDD1_1731 9a35e6f1ba2fe3aba33958f42428f84e 326 SUPERFAMILY SSF52728 167 325 1.57E-53 T 15-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 XDD1_1731 9a35e6f1ba2fe3aba33958f42428f84e 326 Pfam PF03830 PTS system sorbose subfamily IIB component 169 315 1.7E-53 T 15-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 XDD1_1731 9a35e6f1ba2fe3aba33958f42428f84e 326 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 169 316 1.4E-54 T 15-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 XDD1_1731 9a35e6f1ba2fe3aba33958f42428f84e 326 Gene3D G3DSA:3.40.35.10 164 326 1.6E-58 T 15-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 XDD1_0579 12ca5b7209e2695a6cae79592eb2f1b8 725 SUPERFAMILY SSF52518 404 640 4.32E-33 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_0579 12ca5b7209e2695a6cae79592eb2f1b8 725 Gene3D G3DSA:3.40.50.970 3 203 4.9E-24 T 15-10-2018 XDD1_0579 12ca5b7209e2695a6cae79592eb2f1b8 725 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 442 583 8.7E-20 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 XDD1_0579 12ca5b7209e2695a6cae79592eb2f1b8 725 Gene3D G3DSA:3.40.50.970 432 619 1.4E-16 T 15-10-2018 XDD1_0579 12ca5b7209e2695a6cae79592eb2f1b8 725 SUPERFAMILY SSF52518 21 202 2.04E-26 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_1468 028fde84f500d49c15030cc3e66d056e 159 Pfam PF01967 MoaC family 15 150 7.9E-55 T 15-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 XDD1_1468 028fde84f500d49c15030cc3e66d056e 159 SUPERFAMILY SSF55040 11 155 5.62E-61 T 15-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 XDD1_1468 028fde84f500d49c15030cc3e66d056e 159 Gene3D G3DSA:3.30.70.640 1 159 2.6E-70 T 15-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 XDD1_1468 028fde84f500d49c15030cc3e66d056e 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 6.3E-73 T 15-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 XDD1_1468 028fde84f500d49c15030cc3e66d056e 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 36.346 T 15-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 XDD1_3495 698bb8d9393346640ce999887a86e23c 226 Pfam PF05947 Type VI secretion system, TssF 19 82 5.6E-15 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like XDD1_2230 79c8f866370e9a73d8c5c2f04a39dba7 343 Gene3D G3DSA:3.40.50.300 18 342 1.8E-97 T 15-10-2018 XDD1_2230 79c8f866370e9a73d8c5c2f04a39dba7 343 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 252 338 6.7E-29 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 XDD1_2230 79c8f866370e9a73d8c5c2f04a39dba7 343 SUPERFAMILY SSF52540 21 273 1.73E-73 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2230 79c8f866370e9a73d8c5c2f04a39dba7 343 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 253 320 2.5E-19 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 XDD1_2230 79c8f866370e9a73d8c5c2f04a39dba7 343 SMART SM00382 58 251 3.3E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_2230 79c8f866370e9a73d8c5c2f04a39dba7 343 Pfam PF00005 ABC transporter 50 201 4.8E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_2230 79c8f866370e9a73d8c5c2f04a39dba7 343 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_1773 f7884fbc1bb2f62d6dcf5b4962654e0f 126 Gene3D G3DSA:3.30.110.10 31 126 3.6E-40 T 15-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 XDD1_1773 f7884fbc1bb2f62d6dcf5b4962654e0f 126 SUPERFAMILY SSF54364 1 33 3.79E-12 T 15-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 XDD1_1773 f7884fbc1bb2f62d6dcf5b4962654e0f 126 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 38 124 2.6E-38 T 15-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 XDD1_1773 f7884fbc1bb2f62d6dcf5b4962654e0f 126 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 31 2.5E-12 T 15-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 XDD1_1773 f7884fbc1bb2f62d6dcf5b4962654e0f 126 SUPERFAMILY SSF55200 37 126 1.57E-35 T 15-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 XDD1_1773 f7884fbc1bb2f62d6dcf5b4962654e0f 126 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 126 8.1E-58 T 15-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 XDD1_1773 f7884fbc1bb2f62d6dcf5b4962654e0f 126 ProSitePatterns PS00938 Initiation factor 3 signature. 13 26 - T 15-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 XDD1_1773 f7884fbc1bb2f62d6dcf5b4962654e0f 126 Gene3D G3DSA:3.10.20.80 1 30 4.7E-13 T 15-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 XDD1_1190 2867e5be4ddf8f9f37bb7b5f24bd7328 415 Hamap MF_01063 Esterase FrsA [frsA]. 1 415 59.382 T 15-10-2018 IPR010520 UPF0255 family XDD1_1190 2867e5be4ddf8f9f37bb7b5f24bd7328 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 414 8.8E-177 T 15-10-2018 IPR010520 UPF0255 family XDD1_1190 2867e5be4ddf8f9f37bb7b5f24bd7328 415 SUPERFAMILY SSF53474 46 379 5.36E-48 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1190 2867e5be4ddf8f9f37bb7b5f24bd7328 415 Gene3D G3DSA:3.40.50.1820 16 415 6.4E-105 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1865 cf555bcf30418e9ba1b9119a97a2be56 369 Gene3D G3DSA:3.30.420.40 145 327 8.0E-134 T 15-10-2018 XDD1_1865 cf555bcf30418e9ba1b9119a97a2be56 369 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 5 366 3.0E-165 T 15-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 XDD1_1865 cf555bcf30418e9ba1b9119a97a2be56 369 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 41.794 T 15-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 XDD1_1865 cf555bcf30418e9ba1b9119a97a2be56 369 SUPERFAMILY SSF53067 5 340 3.75E-25 T 15-10-2018 XDD1_1865 cf555bcf30418e9ba1b9119a97a2be56 369 Gene3D G3DSA:3.30.420.40 11 362 8.0E-134 T 15-10-2018 XDD1_0734 edc1cd7bcadc88e395bb4e2f848d3046 238 SUPERFAMILY SSF53167 3 235 6.41E-96 T 15-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 XDD1_0734 edc1cd7bcadc88e395bb4e2f848d3046 238 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 2.1E-125 T 15-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 XDD1_0734 edc1cd7bcadc88e395bb4e2f848d3046 238 Gene3D G3DSA:3.40.50.1580 1 237 1.4E-79 T 15-10-2018 XDD1_0734 edc1cd7bcadc88e395bb4e2f848d3046 238 Pfam PF01048 Phosphorylase superfamily 15 218 7.2E-42 T 15-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 XDD1_0734 edc1cd7bcadc88e395bb4e2f848d3046 238 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 53.512 T 15-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 XDD1_0734 edc1cd7bcadc88e395bb4e2f848d3046 238 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 15-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 XDD1_0116 657b98b7fb53786784972a8998b29a06 213 SUPERFAMILY SSF53271 2 211 1.8E-47 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like XDD1_0116 657b98b7fb53786784972a8998b29a06 213 Pfam PF00156 Phosphoribosyl transferase domain 44 162 8.2E-13 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 XDD1_0116 657b98b7fb53786784972a8998b29a06 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 1.5E-67 T 15-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XDD1_0116 657b98b7fb53786784972a8998b29a06 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 35.999 T 15-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XDD1_0116 657b98b7fb53786784972a8998b29a06 213 Gene3D G3DSA:3.40.50.2020 1 213 1.2E-78 T 15-10-2018 XDD1_1091 19e97b372ff4ef8a08421dc645012f35 125 Pfam PF11190 Protein of unknown function (DUF2976) 37 123 6.4E-32 T 15-10-2018 IPR021356 Integrating conjugative element protein PFL4702 XDD1_1091 19e97b372ff4ef8a08421dc645012f35 125 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 22 124 5.5E-36 T 15-10-2018 IPR021356 Integrating conjugative element protein PFL4702 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 242 746 1.9E-83 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 Pfam PF00122 E1-E2 ATPase 269 448 1.5E-45 T 15-10-2018 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 Pfam PF00403 Heavy-metal-associated domain 87 143 3.0E-12 T 15-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 SUPERFAMILY SSF81665 221 753 1.44E-16 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 ProSitePatterns PS01047 Heavy-metal-associated domain. 87 116 - T 15-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 Gene3D G3DSA:3.40.1110.10 480 599 4.6E-85 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 218 767 1.6E-177 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 Pfam PF00702 haloacid dehalogenase-like hydrolase 466 678 6.1E-42 T 15-10-2018 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 SUPERFAMILY SSF56784 467 764 1.37E-54 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 Gene3D G3DSA:2.70.150.20 268 373 1.7E-30 T 15-10-2018 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 Gene3D G3DSA:3.40.50.1000 450 717 4.6E-85 T 15-10-2018 IPR023214 HAD superfamily XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 Gene3D G3DSA:3.30.70.100 80 150 2.6E-17 T 15-10-2018 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 ProSitePatterns PS01229 Hypothetical cof family signature 2. 665 687 - T 15-10-2018 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 PRINTS PR00941 Cadmium-transporting ATPase signature 85 94 5.0E-7 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 PRINTS PR00941 Cadmium-transporting ATPase signature 96 117 5.0E-7 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 PRINTS PR00941 Cadmium-transporting ATPase signature 273 289 5.0E-7 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 PRINTS PR00941 Cadmium-transporting ATPase signature 253 273 5.0E-7 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 PRINTS PR00941 Cadmium-transporting ATPase signature 334 350 5.0E-7 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 471 477 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 SUPERFAMILY SSF55008 81 145 8.25E-15 T 15-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 SUPERFAMILY SSF81653 271 368 3.01E-20 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 665 684 7.0E-29 T 15-10-2018 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 469 483 7.0E-29 T 15-10-2018 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 592 603 7.0E-29 T 15-10-2018 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 318 332 7.0E-29 T 15-10-2018 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 688 700 7.0E-29 T 15-10-2018 XDD1_3582 bde399c4a0fe1ad35eb796b41ac55d62 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 614 624 7.0E-29 T 15-10-2018 XDD1_1810 0e3ca44656e3a289e27194102909e380 333 Gene3D G3DSA:1.10.3470.10 5 332 4.3E-123 T 15-10-2018 IPR037294 ABC transporter, BtuC-like XDD1_1810 0e3ca44656e3a289e27194102909e380 333 Pfam PF01032 FecCD transport family 17 327 2.8E-99 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 XDD1_1810 0e3ca44656e3a289e27194102909e380 333 SUPERFAMILY SSF81345 7 327 2.62E-89 T 15-10-2018 IPR037294 ABC transporter, BtuC-like XDD1_0527 95fa5cfe8ae22c724fdc0443d9d69951 167 Gene3D G3DSA:3.40.630.30 11 151 1.3E-24 T 15-10-2018 XDD1_0527 95fa5cfe8ae22c724fdc0443d9d69951 167 Pfam PF00583 Acetyltransferase (GNAT) family 55 144 8.8E-14 T 15-10-2018 IPR000182 GNAT domain XDD1_0527 95fa5cfe8ae22c724fdc0443d9d69951 167 SUPERFAMILY SSF55729 2 149 1.89E-28 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_2654 0b6356ec16c35c58038130b7b7b5e558 437 Pfam PF08245 Mur ligase middle domain 55 201 7.7E-12 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XDD1_2654 0b6356ec16c35c58038130b7b7b5e558 437 SUPERFAMILY SSF53623 14 293 1.83E-83 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XDD1_2654 0b6356ec16c35c58038130b7b7b5e558 437 TIGRFAM TIGR01499 folC: bifunctional protein FolC 33 423 1.8E-103 T 15-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 XDD1_2654 0b6356ec16c35c58038130b7b7b5e558 437 PIRSF PIRSF001563 7 430 8.0E-106 T 15-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 XDD1_2654 0b6356ec16c35c58038130b7b7b5e558 437 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 145 160 - T 15-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 XDD1_2654 0b6356ec16c35c58038130b7b7b5e558 437 Gene3D G3DSA:3.90.190.20 296 426 1.3E-33 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XDD1_2654 0b6356ec16c35c58038130b7b7b5e558 437 SUPERFAMILY SSF53244 294 423 5.13E-31 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XDD1_2654 0b6356ec16c35c58038130b7b7b5e558 437 Gene3D G3DSA:3.40.1190.10 2 295 4.1E-92 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XDD1_2654 0b6356ec16c35c58038130b7b7b5e558 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 295 349 2.6E-5 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 Pfam PF01588 Putative tRNA binding domain 579 672 3.6E-21 T 15-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 SUPERFAMILY SSF52374 6 387 7.98E-103 T 15-10-2018 XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 1.4E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 1.4E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 1.4E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 1.4E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 1.4E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 1.4E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 Gene3D G3DSA:1.10.730.10 389 526 1.9E-33 T 15-10-2018 XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 Gene3D G3DSA:2.20.28.20 142 176 3.3E-162 T 15-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.295 T 15-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 538 675 1.9E-44 T 15-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 SUPERFAMILY SSF50249 568 674 5.63E-28 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 SUPERFAMILY SSF57770 142 176 6.15E-13 T 15-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 Pfam PF09334 tRNA synthetases class I (M) 9 396 1.3E-163 T 15-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 Gene3D G3DSA:3.40.50.620 9 384 3.3E-162 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 Gene3D G3DSA:2.40.50.140 563 675 2.4E-29 T 15-10-2018 XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 535 4.1E-201 T 15-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XDD1_1445 5b7a42cc0471548fa22b452ddfd45158 675 SUPERFAMILY SSF47323 390 546 7.41E-44 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_2346 1d61a6541922a9e33908ceec52cfb211 234 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 168 224 8.2E-18 T 15-10-2018 IPR016148 Pili assembly chaperone, C-terminal XDD1_2346 1d61a6541922a9e33908ceec52cfb211 234 SUPERFAMILY SSF49584 139 229 5.89E-24 T 15-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily XDD1_2346 1d61a6541922a9e33908ceec52cfb211 234 SUPERFAMILY SSF49354 20 145 2.07E-40 T 15-10-2018 IPR008962 PapD-like superfamily XDD1_2346 1d61a6541922a9e33908ceec52cfb211 234 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 145 8.3E-42 T 15-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 XDD1_2346 1d61a6541922a9e33908ceec52cfb211 234 Gene3D G3DSA:2.60.40.10 149 232 1.7E-25 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_2346 1d61a6541922a9e33908ceec52cfb211 234 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 102 119 - T 15-10-2018 IPR018046 Pili assembly chaperone, conserved site XDD1_2346 1d61a6541922a9e33908ceec52cfb211 234 Gene3D G3DSA:2.60.40.10 26 146 4.3E-42 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_2346 1d61a6541922a9e33908ceec52cfb211 234 PRINTS PR00969 Pili chaperone signature 103 120 1.3E-35 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XDD1_2346 1d61a6541922a9e33908ceec52cfb211 234 PRINTS PR00969 Pili chaperone signature 127 142 1.3E-35 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XDD1_2346 1d61a6541922a9e33908ceec52cfb211 234 PRINTS PR00969 Pili chaperone signature 25 34 1.3E-35 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XDD1_2346 1d61a6541922a9e33908ceec52cfb211 234 PRINTS PR00969 Pili chaperone signature 163 178 1.3E-35 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XDD1_2346 1d61a6541922a9e33908ceec52cfb211 234 PRINTS PR00969 Pili chaperone signature 75 96 1.3E-35 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XDD1_2995 1af25910d54cdefaa150d898cbe4dd4d 615 SUPERFAMILY SSF51230 102 193 2.36E-23 T 15-10-2018 IPR011053 Single hybrid motif XDD1_2995 1af25910d54cdefaa150d898cbe4dd4d 615 Pfam PF02817 e3 binding domain 312 347 5.2E-15 T 15-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 XDD1_2995 1af25910d54cdefaa150d898cbe4dd4d 615 Gene3D G3DSA:3.30.559.10 367 615 2.5E-100 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2995 1af25910d54cdefaa150d898cbe4dd4d 615 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 183 615 7.1E-217 T 15-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 XDD1_2995 1af25910d54cdefaa150d898cbe4dd4d 615 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 220 249 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 XDD1_2995 1af25910d54cdefaa150d898cbe4dd4d 615 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 125 154 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 XDD1_2995 1af25910d54cdefaa150d898cbe4dd4d 615 Gene3D G3DSA:2.40.50.100 102 179 1.9E-20 T 15-10-2018 XDD1_2995 1af25910d54cdefaa150d898cbe4dd4d 615 Gene3D G3DSA:2.40.50.100 1 78 1.5E-22 T 15-10-2018 XDD1_2995 1af25910d54cdefaa150d898cbe4dd4d 615 Gene3D G3DSA:2.40.50.100 196 274 1.4E-20 T 15-10-2018 XDD1_2995 1af25910d54cdefaa150d898cbe4dd4d 615 SUPERFAMILY SSF47005 306 351 2.49E-13 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 XDD1_2995 1af25910d54cdefaa150d898cbe4dd4d 615 Pfam PF00364 Biotin-requiring enzyme 198 268 1.9E-21 T 15-10-2018 IPR000089 Biotin/lipoyl attachment XDD1_2995 1af25910d54cdefaa150d898cbe4dd4d 615 Pfam PF00364 Biotin-requiring enzyme 4 73 2.0E-22 T 15-10-2018 IPR000089 Biotin/lipoyl attachment XDD1_2995 1af25910d54cdefaa150d898cbe4dd4d 615 Pfam PF00364 Biotin-requiring enzyme 103 173 2.0E-21 T 15-10-2018 IPR000089 Biotin/lipoyl attachment XDD1_2995 1af25910d54cdefaa150d898cbe4dd4d 615 SUPERFAMILY SSF51230 197 289 9.16E-24 T 15-10-2018 IPR011053 Single hybrid motif XDD1_2995 1af25910d54cdefaa150d898cbe4dd4d 615 Gene3D G3DSA:4.10.320.10 312 357 1.1E-22 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 XDD1_2995 1af25910d54cdefaa150d898cbe4dd4d 615 SUPERFAMILY SSF52777 373 614 3.87E-80 T 15-10-2018 XDD1_2995 1af25910d54cdefaa150d898cbe4dd4d 615 SUPERFAMILY SSF51230 1 92 1.19E-23 T 15-10-2018 IPR011053 Single hybrid motif XDD1_2995 1af25910d54cdefaa150d898cbe4dd4d 615 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 XDD1_2995 1af25910d54cdefaa150d898cbe4dd4d 615 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 384 614 1.8E-80 T 15-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 XDD1_2226 3a155b86329eb40f47fe421969b4c47d 233 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 155 225 3.3E-18 T 15-10-2018 IPR037682 TonB, C-terminal GO:0055085 XDD1_2226 3a155b86329eb40f47fe421969b4c47d 233 PRINTS PR01374 Gram-negative bacterial tonB protein signature 70 80 1.4E-27 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XDD1_2226 3a155b86329eb40f47fe421969b4c47d 233 PRINTS PR01374 Gram-negative bacterial tonB protein signature 151 172 1.4E-27 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XDD1_2226 3a155b86329eb40f47fe421969b4c47d 233 PRINTS PR01374 Gram-negative bacterial tonB protein signature 191 208 1.4E-27 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XDD1_2226 3a155b86329eb40f47fe421969b4c47d 233 PRINTS PR01374 Gram-negative bacterial tonB protein signature 172 190 1.4E-27 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XDD1_2226 3a155b86329eb40f47fe421969b4c47d 233 Gene3D G3DSA:3.30.2420.10 146 232 8.2E-29 T 15-10-2018 XDD1_2226 3a155b86329eb40f47fe421969b4c47d 233 Pfam PF16031 TonB N-terminal region 41 153 1.4E-7 T 15-10-2018 XDD1_2226 3a155b86329eb40f47fe421969b4c47d 233 SUPERFAMILY SSF74653 151 220 3.14E-21 T 15-10-2018 XDD1_2226 3a155b86329eb40f47fe421969b4c47d 233 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 157 218 9.0E-16 T 15-10-2018 IPR006260 TonB/TolA, C-terminal XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.559.30 1001 1248 1.3E-154 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF56801 5546 6117 2.75E-163 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.559.10 5123 5497 1.6E-153 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.559.10 4061 4422 2.7E-84 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF52777 4053 4248 5.23E-32 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF47336 7191 7264 7.59E-17 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF47336 2866 2939 2.22E-18 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 ProSitePatterns PS00012 Phosphopantetheine attachment site. 7223 7238 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.559.30 4234 4488 2.7E-84 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:1.10.1200.10 2864 2946 3.0E-25 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:1.10.1200.10 1776 1857 4.7E-21 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 ProSitePatterns PS00455 Putative AMP-binding domain signature. 4663 4674 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF52777 1900 2093 3.0E-32 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SMART SM00823 Phosphopantetheine attachment site 1787 1855 0.095 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SMART SM00823 Phosphopantetheine attachment site 7199 7268 0.021 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SMART SM00823 Phosphopantetheine attachment site 731 800 0.0087 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SMART SM00823 Phosphopantetheine attachment site 5037 5106 0.0016 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SMART SM00823 Phosphopantetheine attachment site 3938 4006 0.22 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SMART SM00823 Phosphopantetheine attachment site 2874 2943 7.7E-4 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SMART SM00823 Phosphopantetheine attachment site 6104 6172 0.089 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF52777 2955 3160 9.34E-48 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1428 1439 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF56801 1246 1800 6.54E-167 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF52777 5117 5323 1.05E-51 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:1.10.1200.10 720 800 1.6E-24 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:1.10.1200.10 6093 6176 1.0E-23 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:1.10.1200.10 5026 5108 1.9E-25 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:1.10.1200.10 7188 7268 3.8E-22 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:1.10.1200.10 3925 4008 3.6E-23 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF52777 17 175 1.67E-30 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF56801 2324 2887 1.96E-169 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 241 645 1.1E-144 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2387 2788 2.2E-141 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 5609 6018 3.3E-140 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3450 3852 3.1E-135 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4534 4951 4.4E-127 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 6704 7113 4.4E-139 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1305 1701 3.4E-144 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.559.10 2960 3338 2.3E-154 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.300.30 5989 6092 9.7E-37 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.300.30 1672 1775 2.7E-34 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.300.30 7084 7187 2.0E-36 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.300.30 2759 2863 2.9E-36 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.300.30 4922 5025 4.9E-36 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF56801 4470 5050 7.46E-157 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 ProSitePatterns PS00012 Phosphopantetheine attachment site. 5061 5076 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF52777 6404 6670 1.22E-40 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF47336 6096 6168 4.32E-17 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.559.10 1897 2086 1.8E-37 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF52777 811 1019 6.89E-50 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.559.10 817 1193 1.3E-154 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.559.30 3144 3393 2.3E-154 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF52777 3146 3416 7.45E-63 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.40.50.12780 210 613 2.4E-150 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.40.50.12780 1274 1669 4.8E-146 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.40.50.12780 3419 3820 1.9E-142 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.40.50.12780 6673 7081 2.3E-150 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.40.50.12780 4502 4919 3.7E-134 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.40.50.12780 5578 5986 1.7E-141 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.40.50.12780 2356 2756 1.1E-143 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF56801 181 744 1.7E-171 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF56801 3391 3951 1.31E-166 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.559.10 17 187 1.5E-33 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF52777 5310 5575 3.11E-62 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF56801 6642 7211 5.76E-168 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 ProSitePatterns PS00455 Putative AMP-binding domain signature. 5733 5744 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2898 2913 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF52777 6220 6416 9.45E-31 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 ProSitePatterns PS00455 Putative AMP-binding domain signature. 6831 6842 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.300.30 3822 3924 1.2E-35 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.300.30 615 719 9.8E-37 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2515 2526 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00550 Phosphopantetheine attachment site 2877 2938 9.6E-10 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00550 Phosphopantetheine attachment site 7202 7262 4.4E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00550 Phosphopantetheine attachment site 3941 4001 6.0E-8 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00550 Phosphopantetheine attachment site 734 795 1.6E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00550 Phosphopantetheine attachment site 6107 6167 6.3E-9 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00550 Phosphopantetheine attachment site 1789 1851 1.8E-7 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00550 Phosphopantetheine attachment site 5040 5101 2.9E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF47336 5029 5103 9.42E-19 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.559.10 6227 6593 3.7E-84 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF52777 2083 2353 2.56E-41 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 ProSitePatterns PS00455 Putative AMP-binding domain signature. 372 383 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00501 AMP-binding enzyme 6683 7089 1.9E-107 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00501 AMP-binding enzyme 220 621 2.5E-111 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00501 AMP-binding enzyme 4513 4927 5.5E-99 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00501 AMP-binding enzyme 3429 3828 3.8E-106 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00501 AMP-binding enzyme 2367 2764 1.3E-108 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00501 AMP-binding enzyme 5588 5994 2.2E-105 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00501 AMP-binding enzyme 1285 1677 1.3E-107 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF52777 4237 4475 2.45E-42 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF13193 AMP-binding enzyme C-terminal domain 1685 1760 4.9E-11 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF13193 AMP-binding enzyme C-terminal domain 4935 5010 4.6E-13 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF13193 AMP-binding enzyme C-terminal domain 7097 7172 1.3E-13 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF13193 AMP-binding enzyme C-terminal domain 2772 2847 3.8E-12 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF13193 AMP-binding enzyme C-terminal domain 3836 3911 2.4E-12 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF13193 AMP-binding enzyme C-terminal domain 6002 6077 2.1E-14 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF13193 AMP-binding enzyme C-terminal domain 629 704 3.7E-11 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3573 3584 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF47336 3930 4002 6.94E-17 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.559.30 6402 6659 3.7E-84 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.559.30 5307 5553 1.6E-153 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF52777 1007 1271 1.78E-64 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00668 Condensation domain 16 174 9.5E-23 T 15-10-2018 IPR001242 Condensation domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00668 Condensation domain 2959 3409 3.0E-105 T 15-10-2018 IPR001242 Condensation domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00668 Condensation domain 5122 5568 3.9E-109 T 15-10-2018 IPR001242 Condensation domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00668 Condensation domain 814 1264 1.1E-104 T 15-10-2018 IPR001242 Condensation domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00668 Condensation domain 6221 6663 1.3E-50 T 15-10-2018 IPR001242 Condensation domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00668 Condensation domain 4055 4491 6.7E-45 T 15-10-2018 IPR001242 Condensation domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Pfam PF00668 Condensation domain 1901 2346 3.2E-52 T 15-10-2018 IPR001242 Condensation domain XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 Gene3D G3DSA:3.30.559.30 2087 2352 7.1E-46 T 15-10-2018 XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF47336 723 797 2.36E-18 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2286 358b072fab200dbec382ec47747a8b93 7310 SUPERFAMILY SSF47336 1781 1852 3.53E-15 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2827 5f670d4228feade0bfe3557725ff3b99 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 1.8E-33 T 15-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 XDD1_2827 5f670d4228feade0bfe3557725ff3b99 144 SUPERFAMILY SSF55961 1 142 2.96E-36 T 15-10-2018 XDD1_2827 5f670d4228feade0bfe3557725ff3b99 144 Gene3D G3DSA:3.30.530.20 3 143 2.6E-40 T 15-10-2018 IPR023393 START-like domain superfamily XDD1_1136 747458f2a0e2e8ab57cba56f7a9bf9d3 248 Pfam PF02390 Putative methyltransferase 73 242 6.3E-63 T 15-10-2018 XDD1_1136 747458f2a0e2e8ab57cba56f7a9bf9d3 248 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 57 247 6.2E-72 T 15-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 XDD1_1136 747458f2a0e2e8ab57cba56f7a9bf9d3 248 SUPERFAMILY SSF53335 27 246 5.78E-42 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_1136 747458f2a0e2e8ab57cba56f7a9bf9d3 248 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 33 247 31.435 T 15-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 XDD1_1136 747458f2a0e2e8ab57cba56f7a9bf9d3 248 Gene3D G3DSA:3.40.50.150 39 248 4.5E-74 T 15-10-2018 XDD1_2181 69d07c2e3be6714539e1f22117c166c1 390 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 384 3.2E-111 T 15-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 XDD1_2181 69d07c2e3be6714539e1f22117c166c1 390 Gene3D G3DSA:2.60.120.10 302 383 3.5E-142 T 15-10-2018 IPR014710 RmlC-like jelly roll fold XDD1_2181 69d07c2e3be6714539e1f22117c166c1 390 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 127 135 - T 15-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 XDD1_2181 69d07c2e3be6714539e1f22117c166c1 390 Pfam PF01238 Phosphomannose isomerase type I 1 357 2.4E-97 T 15-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 XDD1_2181 69d07c2e3be6714539e1f22117c166c1 390 SUPERFAMILY SSF51182 1 372 3.56E-97 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily XDD1_2181 69d07c2e3be6714539e1f22117c166c1 390 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 2.1E-67 T 15-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 XDD1_2181 69d07c2e3be6714539e1f22117c166c1 390 PRINTS PR00714 Phosphomannose isomerase type I signature 127 150 2.1E-67 T 15-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 XDD1_2181 69d07c2e3be6714539e1f22117c166c1 390 PRINTS PR00714 Phosphomannose isomerase type I signature 221 236 2.1E-67 T 15-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 XDD1_2181 69d07c2e3be6714539e1f22117c166c1 390 PRINTS PR00714 Phosphomannose isomerase type I signature 256 275 2.1E-67 T 15-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 XDD1_2181 69d07c2e3be6714539e1f22117c166c1 390 PRINTS PR00714 Phosphomannose isomerase type I signature 237 256 2.1E-67 T 15-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 XDD1_2181 69d07c2e3be6714539e1f22117c166c1 390 PRINTS PR00714 Phosphomannose isomerase type I signature 275 294 2.1E-67 T 15-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 XDD1_2181 69d07c2e3be6714539e1f22117c166c1 390 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 2.1E-67 T 15-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 XDD1_2181 69d07c2e3be6714539e1f22117c166c1 390 PRINTS PR00714 Phosphomannose isomerase type I signature 82 103 2.1E-67 T 15-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 XDD1_2181 69d07c2e3be6714539e1f22117c166c1 390 Gene3D G3DSA:1.10.441.10 151 301 3.5E-142 T 15-10-2018 XDD1_2181 69d07c2e3be6714539e1f22117c166c1 390 PIRSF PIRSF001480 1 390 3.8E-107 T 15-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 XDD1_2181 69d07c2e3be6714539e1f22117c166c1 390 Gene3D G3DSA:2.60.120.10 6 276 3.5E-142 T 15-10-2018 IPR014710 RmlC-like jelly roll fold XDD1_2892 a1b0eec554e672055369bced0994d39a 290 SUPERFAMILY SSF51197 12 270 7.78E-55 T 15-10-2018 XDD1_2892 a1b0eec554e672055369bced0994d39a 290 Gene3D G3DSA:3.60.130.10 3 283 1.9E-88 T 15-10-2018 XDD1_2892 a1b0eec554e672055369bced0994d39a 290 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 30 268 5.0E-40 T 15-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 XDD1_2821 4354bb7ac80a49e04c39184338ccfff0 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 15-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XDD1_2821 4354bb7ac80a49e04c39184338ccfff0 226 SMART SM00987 49 210 6.5E-42 T 15-10-2018 XDD1_2821 4354bb7ac80a49e04c39184338ccfff0 226 Pfam PF03167 Uracil DNA glycosylase superfamily 53 209 1.3E-26 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XDD1_2821 4354bb7ac80a49e04c39184338ccfff0 226 SUPERFAMILY SSF52141 6 221 9.16E-96 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XDD1_2821 4354bb7ac80a49e04c39184338ccfff0 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 212 2.5E-87 T 15-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XDD1_2821 4354bb7ac80a49e04c39184338ccfff0 226 Gene3D G3DSA:3.40.470.10 2 226 5.1E-104 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XDD1_2821 4354bb7ac80a49e04c39184338ccfff0 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.325 T 15-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XDD1_2821 4354bb7ac80a49e04c39184338ccfff0 226 SMART SM00986 49 210 6.5E-42 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XDD1_2423 9b3bbb4ee53d57cc05e7773eda4a354c 123 SUPERFAMILY SSF52833 9 122 2.94E-35 T 15-10-2018 IPR036249 Thioredoxin-like superfamily XDD1_2423 9b3bbb4ee53d57cc05e7773eda4a354c 123 Gene3D G3DSA:3.40.30.10 4 122 1.1E-47 T 15-10-2018 XDD1_2423 9b3bbb4ee53d57cc05e7773eda4a354c 123 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 9 122 6.9E-44 T 15-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 XDD1_2423 9b3bbb4ee53d57cc05e7773eda4a354c 123 Pfam PF03960 ArsC family 12 121 1.3E-22 T 15-10-2018 IPR006660 Arsenate reductase-like XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 SUPERFAMILY SSF56801 1329 1838 7.85E-81 T 15-10-2018 XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 SUPERFAMILY SSF52777 1090 1326 4.78E-27 T 15-10-2018 XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 SMART SM00823 Phosphopantetheine attachment site 1850 1920 0.44 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 SMART SM00823 Phosphopantetheine attachment site 812 883 0.012 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 SUPERFAMILY SSF47336 807 883 6.28E-15 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 Gene3D G3DSA:3.30.559.10 911 1272 3.2E-52 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 Gene3D G3DSA:3.30.300.30 1735 1837 1.7E-12 T 15-10-2018 XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 ProSitePatterns PS00012 Phosphopantetheine attachment site. 838 853 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 Pfam PF00668 Condensation domain 952 1342 8.0E-33 T 15-10-2018 IPR001242 Condensation domain XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 ProSitePatterns PS00455 Putative AMP-binding domain signature. 458 469 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 SUPERFAMILY SSF47336 1847 1920 1.11E-10 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 Gene3D G3DSA:1.10.1200.10 1838 1926 1.1E-11 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 Pfam PF00501 AMP-binding enzyme 1366 1740 4.2E-44 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 Pfam PF00501 AMP-binding enzyme 338 702 5.9E-57 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 Gene3D G3DSA:3.30.559.30 1086 1323 3.2E-52 T 15-10-2018 XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 Pfam PF00975 Thioesterase domain 1944 2164 5.0E-7 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1486 1497 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 Gene3D G3DSA:3.40.50.12780 1356 1734 8.0E-59 T 15-10-2018 XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 Gene3D G3DSA:3.40.50.12780 289 697 1.3E-71 T 15-10-2018 XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 SUPERFAMILY SSF52777 906 1102 2.11E-22 T 15-10-2018 XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 Gene3D G3DSA:3.40.50.1820 1932 2173 1.4E-7 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 Gene3D G3DSA:3.30.300.30 698 803 1.6E-29 T 15-10-2018 XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 SUPERFAMILY SSF53474 1878 2164 2.5E-9 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 Gene3D G3DSA:3.40.50.1820 804 909 1.3E-19 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 Pfam PF00550 Phosphopantetheine attachment site 1852 1911 7.9E-8 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 Pfam PF00550 Phosphopantetheine attachment site 813 879 2.2E-14 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 Pfam PF13193 AMP-binding enzyme C-terminal domain 712 786 7.7E-13 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2712 bfa3f229e10ee54ee8c4e34c3ae1e6e0 2180 SUPERFAMILY SSF56801 277 824 1.44E-106 T 15-10-2018 XDD1_2661 c7ece715a89e5ad6f3b70493f0bd8865 175 ProSitePatterns PS00893 Nudix box signature. 72 93 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XDD1_2661 c7ece715a89e5ad6f3b70493f0bd8865 175 Pfam PF00293 NUDIX domain 35 148 1.6E-16 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XDD1_2661 c7ece715a89e5ad6f3b70493f0bd8865 175 PIRSF PIRSF017340 1 169 1.7E-63 T 15-10-2018 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 XDD1_2661 c7ece715a89e5ad6f3b70493f0bd8865 175 Gene3D G3DSA:3.90.79.10 2 173 2.9E-55 T 15-10-2018 XDD1_2661 c7ece715a89e5ad6f3b70493f0bd8865 175 SUPERFAMILY SSF55811 9 165 6.63E-33 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XDD1_1609 23b5929a249b428c03321e660807bdd4 197 PIRSF PIRSF003093 1 197 1.5E-56 T 15-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 XDD1_1609 23b5929a249b428c03321e660807bdd4 197 SUPERFAMILY SSF52540 57 171 6.37E-26 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1609 23b5929a249b428c03321e660807bdd4 197 Gene3D G3DSA:3.40.50.300 57 170 1.2E-25 T 15-10-2018 XDD1_1609 23b5929a249b428c03321e660807bdd4 197 Pfam PF03846 Cell division inhibitor SulA 54 145 5.3E-38 T 15-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 XDD1_1609 23b5929a249b428c03321e660807bdd4 197 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 13 197 31.693 T 15-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 XDD1_0643 c5c99a7c99fdf172e930ad805eec9b9b 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 7.0E-195 T 15-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 XDD1_0643 c5c99a7c99fdf172e930ad805eec9b9b 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 5.4E-142 T 15-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 XDD1_0643 c5c99a7c99fdf172e930ad805eec9b9b 433 PIRSF PIRSF004539 1 433 4.4E-174 T 15-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 XDD1_0839 ea5b04be9a88a720a4cf534812d79fb5 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 2.1E-59 T 15-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XDD1_0839 ea5b04be9a88a720a4cf534812d79fb5 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.743 T 15-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XDD1_0839 ea5b04be9a88a720a4cf534812d79fb5 156 SUPERFAMILY SSF52121 4 154 1.7E-60 T 15-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XDD1_0839 ea5b04be9a88a720a4cf534812d79fb5 156 Gene3D G3DSA:3.40.50.960 1 156 1.6E-64 T 15-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XDD1_0839 ea5b04be9a88a720a4cf534812d79fb5 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.1E-56 T 15-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XDD1_0335 b109a5f6aa45c8a36f4149154d1ba7b6 386 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 14 339 8.1E-122 T 15-10-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 XDD1_0335 b109a5f6aa45c8a36f4149154d1ba7b6 386 Pfam PF13533 Biotin-lipoyl like 55 103 1.6E-6 T 15-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain XDD1_0335 b109a5f6aa45c8a36f4149154d1ba7b6 386 Gene3D G3DSA:2.40.50.100 56 136 5.4E-6 T 15-10-2018 XDD1_0335 b109a5f6aa45c8a36f4149154d1ba7b6 386 SUPERFAMILY SSF111369 160 261 9.94E-8 T 15-10-2018 XDD1_0335 b109a5f6aa45c8a36f4149154d1ba7b6 386 Gene3D G3DSA:2.40.30.170 227 346 4.0E-32 T 15-10-2018 XDD1_0335 b109a5f6aa45c8a36f4149154d1ba7b6 386 Pfam PF13437 HlyD family secretion protein 212 322 1.2E-12 T 15-10-2018 XDD1_2081 981d968034590f838cd03d1898304e6b 638 SUPERFAMILY SSF52540 14 233 8.63E-27 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2081 981d968034590f838cd03d1898304e6b 638 SMART SM00491 474 603 2.8E-54 T 15-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 XDD1_2081 981d968034590f838cd03d1898304e6b 638 Pfam PF04851 Type III restriction enzyme, res subunit 18 232 3.2E-6 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XDD1_2081 981d968034590f838cd03d1898304e6b 638 Pfam PF13307 Helicase C-terminal domain 459 616 1.4E-34 T 15-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 XDD1_2081 981d968034590f838cd03d1898304e6b 638 SUPERFAMILY SSF52540 40 599 4.15E-11 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2081 981d968034590f838cd03d1898304e6b 638 SMART SM00487 16 302 0.0037 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XDD1_2081 981d968034590f838cd03d1898304e6b 638 Gene3D G3DSA:3.40.50.300 442 632 7.4E-37 T 15-10-2018 XDD1_2081 981d968034590f838cd03d1898304e6b 638 Gene3D G3DSA:3.40.50.300 18 283 9.9E-49 T 15-10-2018 XDD1_1133 e0f6c2103c7fee1016f5919a9de93dfb 381 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 236 264 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 XDD1_1133 e0f6c2103c7fee1016f5919a9de93dfb 381 Pfam PF01464 Transglycosylase SLT domain 219 341 4.5E-34 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 XDD1_1133 e0f6c2103c7fee1016f5919a9de93dfb 381 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 25 381 59.683 T 15-10-2018 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 XDD1_1133 e0f6c2103c7fee1016f5919a9de93dfb 381 SUPERFAMILY SSF53955 180 380 3.38E-38 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily XDD1_1133 e0f6c2103c7fee1016f5919a9de93dfb 381 Pfam PF11873 Domain of unknown function (DUF3393) 29 214 5.7E-76 T 15-10-2018 IPR024570 Murein transglycosylase-C, N-terminal XDD1_1133 e0f6c2103c7fee1016f5919a9de93dfb 381 Gene3D G3DSA:1.10.530.10 201 378 7.6E-53 T 15-10-2018 XDD1_1775 87cae367af5aee0746b6bd3faea67896 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.068 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1775 87cae367af5aee0746b6bd3faea67896 118 Gene3D G3DSA:1.10.1900.20 56 118 2.6E-29 T 15-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1775 87cae367af5aee0746b6bd3faea67896 118 Gene3D G3DSA:1.10.720.90 2 55 5.5E-25 T 15-10-2018 XDD1_1775 87cae367af5aee0746b6bd3faea67896 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 5.0E-14 T 15-10-2018 XDD1_1775 87cae367af5aee0746b6bd3faea67896 118 Pfam PF00453 Ribosomal protein L20 3 109 2.9E-49 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1775 87cae367af5aee0746b6bd3faea67896 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-42 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1775 87cae367af5aee0746b6bd3faea67896 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-42 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1775 87cae367af5aee0746b6bd3faea67896 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-42 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1775 87cae367af5aee0746b6bd3faea67896 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.7E-53 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1775 87cae367af5aee0746b6bd3faea67896 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1775 87cae367af5aee0746b6bd3faea67896 118 SUPERFAMILY SSF74731 3 117 8.11E-51 T 15-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1166 79612d2b7dfe228f7568f137796edfb0 815 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 3.4E-114 T 15-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 XDD1_1166 79612d2b7dfe228f7568f137796edfb0 815 SUPERFAMILY SSF56645 119 355 2.88E-47 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 XDD1_1166 79612d2b7dfe228f7568f137796edfb0 815 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 328 8.2E-10 T 15-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 XDD1_1166 79612d2b7dfe228f7568f137796edfb0 815 Gene3D G3DSA:1.10.540.10 122 235 3.1E-102 T 15-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 XDD1_1166 79612d2b7dfe228f7568f137796edfb0 815 Gene3D G3DSA:2.40.110.10 236 359 3.1E-102 T 15-10-2018 XDD1_1166 79612d2b7dfe228f7568f137796edfb0 815 Gene3D G3DSA:1.20.140.10 360 507 3.1E-102 T 15-10-2018 XDD1_1166 79612d2b7dfe228f7568f137796edfb0 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 233 1.3E-16 T 15-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 XDD1_1166 79612d2b7dfe228f7568f137796edfb0 815 SUPERFAMILY SSF47203 360 507 1.06E-20 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 XDD1_1166 79612d2b7dfe228f7568f137796edfb0 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 507 2.4E-10 T 15-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 XDD1_0338 a8bc62f8d079178b485b16b4ddf6ae02 492 Gene3D G3DSA:3.40.50.720 1 208 1.1E-84 T 15-10-2018 XDD1_0338 a8bc62f8d079178b485b16b4ddf6ae02 492 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.8E-58 T 15-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XDD1_0338 a8bc62f8d079178b485b16b4ddf6ae02 492 SUPERFAMILY SSF48179 350 485 6.97E-39 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XDD1_0338 a8bc62f8d079178b485b16b4ddf6ae02 492 SUPERFAMILY SSF51735 29 209 7.45E-57 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0338 a8bc62f8d079178b485b16b4ddf6ae02 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 483 8.4E-20 T 15-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XDD1_0338 a8bc62f8d079178b485b16b4ddf6ae02 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 2.5E-27 T 15-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XDD1_0338 a8bc62f8d079178b485b16b4ddf6ae02 492 SUPERFAMILY SSF48179 210 369 2.55E-41 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XDD1_0338 a8bc62f8d079178b485b16b4ddf6ae02 492 Gene3D G3DSA:1.10.1040.10 209 492 5.2E-124 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 XDD1_0338 a8bc62f8d079178b485b16b4ddf6ae02 492 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 486 38.965 T 15-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XDD1_0338 a8bc62f8d079178b485b16b4ddf6ae02 492 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 2.5E-131 T 15-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XDD1_1737 74606668185511b6a17b6c3d22f48455 317 SUPERFAMILY SSF53474 6 313 2.22E-60 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1737 74606668185511b6a17b6c3d22f48455 317 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 40 48 2.9E-13 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XDD1_1737 74606668185511b6a17b6c3d22f48455 317 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 109 123 2.9E-13 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XDD1_1737 74606668185511b6a17b6c3d22f48455 317 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 66 77 2.9E-13 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XDD1_1737 74606668185511b6a17b6c3d22f48455 317 PIRSF PIRSF006431 2 317 2.9E-139 T 15-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 XDD1_1737 74606668185511b6a17b6c3d22f48455 317 Gene3D G3DSA:3.40.50.1820 1 317 1.2E-110 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1737 74606668185511b6a17b6c3d22f48455 317 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 13 314 2.6E-128 T 15-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 XDD1_1737 74606668185511b6a17b6c3d22f48455 317 Pfam PF00561 alpha/beta hydrolase fold 41 297 2.6E-30 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_1737 74606668185511b6a17b6c3d22f48455 317 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 2.8E-6 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_1737 74606668185511b6a17b6c3d22f48455 317 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 2.8E-6 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_1737 74606668185511b6a17b6c3d22f48455 317 PRINTS PR00111 Alpha/beta hydrolase fold signature 63 78 2.8E-6 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_3359 8b1b37fe89f85dca9505ac3b1fb32936 441 PIRSF PIRSF000423 1 441 6.7E-202 T 15-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 XDD1_3359 8b1b37fe89f85dca9505ac3b1fb32936 441 SUPERFAMILY SSF53633 3 290 3.63E-66 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XDD1_3359 8b1b37fe89f85dca9505ac3b1fb32936 441 Pfam PF00696 Amino acid kinase family 25 267 1.1E-28 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XDD1_3359 8b1b37fe89f85dca9505ac3b1fb32936 441 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 441 225.063 T 15-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 XDD1_3359 8b1b37fe89f85dca9505ac3b1fb32936 441 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 441 3.1E-187 T 15-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 XDD1_3359 8b1b37fe89f85dca9505ac3b1fb32936 441 Gene3D G3DSA:3.40.1160.10 7 292 1.5E-81 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XDD1_3359 8b1b37fe89f85dca9505ac3b1fb32936 441 Pfam PF00583 Acetyltransferase (GNAT) family 336 412 5.5E-7 T 15-10-2018 IPR000182 GNAT domain XDD1_3359 8b1b37fe89f85dca9505ac3b1fb32936 441 SUPERFAMILY SSF55729 296 419 1.77E-17 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_3359 8b1b37fe89f85dca9505ac3b1fb32936 441 Gene3D G3DSA:3.40.630.30 293 441 2.8E-37 T 15-10-2018 XDD1_2476 7b3aad828969c11cb4d6db2bad983695 367 Gene3D G3DSA:2.30.30.280 214 282 4.0E-29 T 15-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 XDD1_2476 7b3aad828969c11cb4d6db2bad983695 367 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 362 40.84 T 15-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 XDD1_2476 7b3aad828969c11cb4d6db2bad983695 367 Gene3D G3DSA:2.40.30.10 283 366 2.4E-31 T 15-10-2018 XDD1_2476 7b3aad828969c11cb4d6db2bad983695 367 Gene3D G3DSA:3.40.50.620 1 212 3.2E-97 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_2476 7b3aad828969c11cb4d6db2bad983695 367 SUPERFAMILY SSF52402 5 295 1.15E-57 T 15-10-2018 XDD1_2476 7b3aad828969c11cb4d6db2bad983695 367 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 361 3.3E-156 T 15-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 XDD1_2476 7b3aad828969c11cb4d6db2bad983695 367 Pfam PF03054 tRNA methyl transferase 7 361 3.4E-143 T 15-10-2018 XDD1_2195 ac3bbd25cf2e7e60e2580927c8fbafd2 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 644 3.1E-215 T 15-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 XDD1_2195 ac3bbd25cf2e7e60e2580927c8fbafd2 644 SUPERFAMILY SSF50249 8 78 7.55E-14 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_2195 ac3bbd25cf2e7e60e2580927c8fbafd2 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 644 44.615 T 15-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 XDD1_2195 ac3bbd25cf2e7e60e2580927c8fbafd2 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 643 0.0 T 15-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 XDD1_2195 ac3bbd25cf2e7e60e2580927c8fbafd2 644 Pfam PF08206 Ribonuclease B OB domain 24 80 2.0E-16 T 15-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain XDD1_2195 ac3bbd25cf2e7e60e2580927c8fbafd2 644 SMART SM00357 23 79 2.8E-9 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 XDD1_2195 ac3bbd25cf2e7e60e2580927c8fbafd2 644 ProSitePatterns PS01175 Ribonuclease II family signature. 485 509 - T 15-10-2018 IPR022966 Ribonuclease II/R, conserved site XDD1_2195 ac3bbd25cf2e7e60e2580927c8fbafd2 644 SUPERFAMILY SSF50249 561 643 5.03E-18 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_2195 ac3bbd25cf2e7e60e2580927c8fbafd2 644 Gene3D G3DSA:2.40.50.140 1 82 6.5E-28 T 15-10-2018 XDD1_2195 ac3bbd25cf2e7e60e2580927c8fbafd2 644 Pfam PF00773 RNB domain 190 517 2.7E-88 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 XDD1_2195 ac3bbd25cf2e7e60e2580927c8fbafd2 644 Pfam PF00575 S1 RNA binding domain 562 640 2.0E-7 T 15-10-2018 IPR003029 S1 domain GO:0003676 XDD1_2195 ac3bbd25cf2e7e60e2580927c8fbafd2 644 SUPERFAMILY SSF50249 83 173 1.09E-30 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_2195 ac3bbd25cf2e7e60e2580927c8fbafd2 644 Gene3D G3DSA:2.40.50.140 559 644 1.1E-32 T 15-10-2018 XDD1_2195 ac3bbd25cf2e7e60e2580927c8fbafd2 644 SMART SM00955 190 518 1.7E-124 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 XDD1_2195 ac3bbd25cf2e7e60e2580927c8fbafd2 644 Gene3D G3DSA:2.40.50.640 83 157 2.7E-29 T 15-10-2018 XDD1_2195 ac3bbd25cf2e7e60e2580927c8fbafd2 644 SUPERFAMILY SSF50249 181 558 7.42E-116 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_2951 5a0ba0207d20ddf38a1ae12608406c43 504 Gene3D G3DSA:3.30.930.10 154 498 1.1E-135 T 15-10-2018 XDD1_2951 5a0ba0207d20ddf38a1ae12608406c43 504 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 20 504 45.263 T 15-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XDD1_2951 5a0ba0207d20ddf38a1ae12608406c43 504 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 13 504 3.1E-228 T 15-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XDD1_2951 5a0ba0207d20ddf38a1ae12608406c43 504 Pfam PF01336 OB-fold nucleic acid binding domain 67 145 2.5E-15 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 XDD1_2951 5a0ba0207d20ddf38a1ae12608406c43 504 Gene3D G3DSA:2.40.50.140 14 153 4.7E-43 T 15-10-2018 XDD1_2951 5a0ba0207d20ddf38a1ae12608406c43 504 PIRSF PIRSF039101 1 504 9.2E-200 T 15-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XDD1_2951 5a0ba0207d20ddf38a1ae12608406c43 504 SUPERFAMILY SSF55681 161 501 4.59E-124 T 15-10-2018 XDD1_2951 5a0ba0207d20ddf38a1ae12608406c43 504 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 500 3.2E-83 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_2951 5a0ba0207d20ddf38a1ae12608406c43 504 SUPERFAMILY SSF50249 13 154 2.23E-47 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_2951 5a0ba0207d20ddf38a1ae12608406c43 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 2.2E-38 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XDD1_2951 5a0ba0207d20ddf38a1ae12608406c43 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 2.2E-38 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XDD1_2951 5a0ba0207d20ddf38a1ae12608406c43 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 385 401 2.2E-38 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XDD1_2951 5a0ba0207d20ddf38a1ae12608406c43 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 2.2E-38 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XDD1_2951 5a0ba0207d20ddf38a1ae12608406c43 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 2.2E-38 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XDD1_1986 6b1c43894b63276f7fbe405b72b90ba9 396 Gene3D G3DSA:3.50.50.60 3 385 2.4E-77 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1986 6b1c43894b63276f7fbe405b72b90ba9 396 Gene3D G3DSA:3.30.9.10 86 352 2.4E-77 T 15-10-2018 XDD1_1986 6b1c43894b63276f7fbe405b72b90ba9 396 Pfam PF01266 FAD dependent oxidoreductase 3 390 6.9E-60 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 XDD1_1986 6b1c43894b63276f7fbe405b72b90ba9 396 SUPERFAMILY SSF51905 1 284 2.76E-45 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0172 4bb59b7a7b1c3046732e8a45bc951850 230 SUPERFAMILY SSF52172 1 186 8.54E-42 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_0172 4bb59b7a7b1c3046732e8a45bc951850 230 SMART SM00862 150 226 3.3E-20 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XDD1_0172 4bb59b7a7b1c3046732e8a45bc951850 230 SMART SM00448 2 111 1.3E-46 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_0172 4bb59b7a7b1c3046732e8a45bc951850 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 226 3.7E-20 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XDD1_0172 4bb59b7a7b1c3046732e8a45bc951850 230 Gene3D G3DSA:3.40.50.2300 1 127 2.6E-41 T 15-10-2018 XDD1_0172 4bb59b7a7b1c3046732e8a45bc951850 230 Pfam PF00072 Response regulator receiver domain 4 112 2.0E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_0172 4bb59b7a7b1c3046732e8a45bc951850 230 Gene3D G3DSA:1.10.10.10 128 230 1.9E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1595 00f9221080d722696d6e633f45e761a3 872 Gene3D G3DSA:1.25.50.10 546 871 9.7E-117 T 15-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily XDD1_1595 00f9221080d722696d6e633f45e761a3 872 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 870 0.0 T 15-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 XDD1_1595 00f9221080d722696d6e633f45e761a3 872 Pfam PF01433 Peptidase family M1 domain 208 439 2.4E-59 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XDD1_1595 00f9221080d722696d6e633f45e761a3 872 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 1.0E-8 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XDD1_1595 00f9221080d722696d6e633f45e761a3 872 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 1.0E-8 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XDD1_1595 00f9221080d722696d6e633f45e761a3 872 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 1.0E-8 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XDD1_1595 00f9221080d722696d6e633f45e761a3 872 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 1.0E-8 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XDD1_1595 00f9221080d722696d6e633f45e761a3 872 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 1.0E-8 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XDD1_1595 00f9221080d722696d6e633f45e761a3 872 Gene3D G3DSA:2.60.40.1730 15 194 8.6E-72 T 15-10-2018 XDD1_1595 00f9221080d722696d6e633f45e761a3 872 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 548 871 3.5E-115 T 15-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal XDD1_1595 00f9221080d722696d6e633f45e761a3 872 Gene3D G3DSA:1.10.390.10 280 443 1.1E-64 T 15-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily XDD1_1595 00f9221080d722696d6e633f45e761a3 872 Gene3D G3DSA:1.10.1740.60 195 279 1.4E-40 T 15-10-2018 XDD1_1595 00f9221080d722696d6e633f45e761a3 872 SUPERFAMILY SSF55486 204 450 1.61E-73 T 15-10-2018 XDD1_1595 00f9221080d722696d6e633f45e761a3 872 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 444 544 8.3E-34 T 15-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold XDD1_1595 00f9221080d722696d6e633f45e761a3 872 SUPERFAMILY SSF63737 7 193 1.83E-46 T 15-10-2018 XDD1_1595 00f9221080d722696d6e633f45e761a3 872 Gene3D G3DSA:2.60.40.1840 444 545 1.8E-36 T 15-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily XDD1_0310 e6ea2736b0dc12699a36c4f54812fd89 440 Pfam PF01029 NusB family 17 138 5.5E-24 T 15-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 XDD1_0310 e6ea2736b0dc12699a36c4f54812fd89 440 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 12 440 67.506 T 15-10-2018 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 XDD1_0310 e6ea2736b0dc12699a36c4f54812fd89 440 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 19 440 1.1E-168 T 15-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 XDD1_0310 e6ea2736b0dc12699a36c4f54812fd89 440 Gene3D G3DSA:3.40.50.150 242 440 1.3E-69 T 15-10-2018 XDD1_0310 e6ea2736b0dc12699a36c4f54812fd89 440 Gene3D G3DSA:1.10.287.730 157 183 1.4E-13 T 15-10-2018 XDD1_0310 e6ea2736b0dc12699a36c4f54812fd89 440 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 327 338 - T 15-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 XDD1_0310 e6ea2736b0dc12699a36c4f54812fd89 440 Gene3D G3DSA:3.30.70.1170 184 241 1.2E-21 T 15-10-2018 XDD1_0310 e6ea2736b0dc12699a36c4f54812fd89 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 328 340 2.0E-30 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XDD1_0310 e6ea2736b0dc12699a36c4f54812fd89 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 422 439 2.0E-30 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XDD1_0310 e6ea2736b0dc12699a36c4f54812fd89 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 262 272 2.0E-30 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XDD1_0310 e6ea2736b0dc12699a36c4f54812fd89 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 233 247 2.0E-30 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XDD1_0310 e6ea2736b0dc12699a36c4f54812fd89 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 378 394 2.0E-30 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XDD1_0310 e6ea2736b0dc12699a36c4f54812fd89 440 SUPERFAMILY SSF53335 151 439 6.6E-74 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_0310 e6ea2736b0dc12699a36c4f54812fd89 440 SUPERFAMILY SSF48013 17 160 8.11E-35 T 15-10-2018 IPR035926 NusB-like superfamily XDD1_0310 e6ea2736b0dc12699a36c4f54812fd89 440 Pfam PF01189 16S rRNA methyltransferase RsmB/F 252 437 4.7E-71 T 15-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 XDD1_0310 e6ea2736b0dc12699a36c4f54812fd89 440 Gene3D G3DSA:1.10.940.10 12 156 2.8E-46 T 15-10-2018 IPR035926 NusB-like superfamily XDD1_0061 6e9bd5e7d31432af30c6ed800e2d6006 651 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 15-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 XDD1_0061 6e9bd5e7d31432af30c6ed800e2d6006 651 Gene3D G3DSA:3.30.300.30 518 651 2.5E-32 T 15-10-2018 XDD1_0061 6e9bd5e7d31432af30c6ed800e2d6006 651 Gene3D G3DSA:3.40.50.12780 51 515 1.1E-104 T 15-10-2018 XDD1_0061 6e9bd5e7d31432af30c6ed800e2d6006 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_0061 6e9bd5e7d31432af30c6ed800e2d6006 651 Pfam PF00501 AMP-binding enzyme 83 522 5.5E-93 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_0061 6e9bd5e7d31432af30c6ed800e2d6006 651 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 1.2E-19 T 15-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 XDD1_0061 6e9bd5e7d31432af30c6ed800e2d6006 651 SUPERFAMILY SSF56801 13 643 2.22E-185 T 15-10-2018 XDD1_0061 6e9bd5e7d31432af30c6ed800e2d6006 651 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.405 T 15-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 XDD1_0061 6e9bd5e7d31432af30c6ed800e2d6006 651 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 5.2E-24 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_1600 39987110ea1dd33c95453900f691ea10 636 Gene3D G3DSA:1.10.287.380 554 636 1.4E-25 T 15-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 XDD1_1600 39987110ea1dd33c95453900f691ea10 636 SMART SM00382 28 230 3.3E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1600 39987110ea1dd33c95453900f691ea10 636 SMART SM00382 344 515 1.8E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1600 39987110ea1dd33c95453900f691ea10 636 Pfam PF00005 ABC transporter 335 469 2.6E-25 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1600 39987110ea1dd33c95453900f691ea10 636 Gene3D G3DSA:3.40.50.300 283 551 1.7E-66 T 15-10-2018 XDD1_1600 39987110ea1dd33c95453900f691ea10 636 Pfam PF16326 ABC transporter C-terminal domain 563 631 9.0E-17 T 15-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 XDD1_1600 39987110ea1dd33c95453900f691ea10 636 Gene3D G3DSA:3.40.50.300 11 279 3.7E-66 T 15-10-2018 XDD1_1600 39987110ea1dd33c95453900f691ea10 636 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_1600 39987110ea1dd33c95453900f691ea10 636 Pfam PF12848 ABC transporter 224 299 1.1E-11 T 15-10-2018 IPR032781 ABC-transporter extension domain XDD1_1600 39987110ea1dd33c95453900f691ea10 636 SUPERFAMILY SSF52540 310 501 2.79E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1600 39987110ea1dd33c95453900f691ea10 636 SUPERFAMILY SSF52540 4 241 1.5E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1600 39987110ea1dd33c95453900f691ea10 636 Pfam PF00005 ABC transporter 19 185 2.3E-22 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1600 39987110ea1dd33c95453900f691ea10 636 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_0434 84300f375734fe8bd2f63919cbaf0b1c 150 SUPERFAMILY SSF55658 1 57 7.85E-19 T 15-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal XDD1_0434 84300f375734fe8bd2f63919cbaf0b1c 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.6 T 15-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0434 84300f375734fe8bd2f63919cbaf0b1c 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 1.1E-21 T 15-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0434 84300f375734fe8bd2f63919cbaf0b1c 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 4.1E-25 T 15-10-2018 IPR020069 Ribosomal protein L9, C-terminal XDD1_0434 84300f375734fe8bd2f63919cbaf0b1c 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 15-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0434 84300f375734fe8bd2f63919cbaf0b1c 150 Gene3D G3DSA:3.10.430.100 61 149 2.0E-31 T 15-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily XDD1_0434 84300f375734fe8bd2f63919cbaf0b1c 150 Gene3D G3DSA:3.40.5.10 1 50 4.5E-25 T 15-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0434 84300f375734fe8bd2f63919cbaf0b1c 150 SUPERFAMILY SSF55653 60 149 3.01E-25 T 15-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily XDD1_0434 84300f375734fe8bd2f63919cbaf0b1c 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.5E-57 T 15-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0303 233de45593fc80c0dacad19925451316 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 1.8E-55 T 15-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0303 233de45593fc80c0dacad19925451316 129 PIRSF PIRSF002131 1 129 5.5E-53 T 15-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 XDD1_0303 233de45593fc80c0dacad19925451316 129 Pfam PF00411 Ribosomal protein S11 19 128 1.6E-54 T 15-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 XDD1_0303 233de45593fc80c0dacad19925451316 129 Gene3D G3DSA:3.30.420.80 1 129 7.9E-59 T 15-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 XDD1_0303 233de45593fc80c0dacad19925451316 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 15-10-2018 IPR018102 Ribosomal S11, conserved site XDD1_0303 233de45593fc80c0dacad19925451316 129 SUPERFAMILY SSF53137 14 129 3.79E-48 T 15-10-2018 XDD1_0303 233de45593fc80c0dacad19925451316 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.674 T 15-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 Pfam PF07724 AAA domain (Cdc48 subfamily) 645 806 1.3E-37 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 SUPERFAMILY SSF52540 179 507 6.21E-69 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 896 0.0 T 15-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 Gene3D G3DSA:3.40.50.300 362 593 8.9E-43 T 15-10-2018 XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 313 325 - T 15-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 SMART SM01086 812 897 1.5E-6 T 15-10-2018 IPR019489 Clp ATPase, C-terminal XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 680 698 - T 15-10-2018 IPR028299 ClpA/B, conserved site 2 XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 695 713 2.7E-29 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 2.7E-29 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 757 771 2.7E-29 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 724 742 2.7E-29 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 Gene3D G3DSA:1.10.8.60 812 909 7.8E-9 T 15-10-2018 XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 SUPERFAMILY SSF81923 11 123 1.73E-13 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 812 885 6.4E-11 T 15-10-2018 IPR019489 Clp ATPase, C-terminal XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 Gene3D G3DSA:1.10.1780.10 5 159 1.0E-36 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 Gene3D G3DSA:3.40.50.300 170 361 3.9E-59 T 15-10-2018 XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 SUPERFAMILY SSF52540 595 877 4.16E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 Gene3D G3DSA:3.40.50.300 598 810 1.6E-61 T 15-10-2018 XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 SMART SM00382 217 363 1.4E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 SMART SM00382 646 812 1.5E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3756 db4ba9dfb1754b45bce25952bd5d498a 910 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 222 333 1.1E-7 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_0744 11ea89cdbb06d79130b26fde1a42e80d 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 34.967 T 15-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XDD1_0744 11ea89cdbb06d79130b26fde1a42e80d 273 SUPERFAMILY SSF55347 131 240 1.59E-36 T 15-10-2018 XDD1_0744 11ea89cdbb06d79130b26fde1a42e80d 273 PIRSF PIRSF000161 4 272 1.1E-88 T 15-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XDD1_0744 11ea89cdbb06d79130b26fde1a42e80d 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 1.6E-41 T 15-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XDD1_0744 11ea89cdbb06d79130b26fde1a42e80d 273 SUPERFAMILY SSF51735 5 271 9.87E-52 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0744 11ea89cdbb06d79130b26fde1a42e80d 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 269 3.1E-103 T 15-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XDD1_0744 11ea89cdbb06d79130b26fde1a42e80d 273 Gene3D G3DSA:3.30.360.10 131 238 1.4E-102 T 15-10-2018 XDD1_0744 11ea89cdbb06d79130b26fde1a42e80d 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 15-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XDD1_0744 11ea89cdbb06d79130b26fde1a42e80d 273 Gene3D G3DSA:3.40.50.720 7 268 1.4E-102 T 15-10-2018 XDD1_0744 11ea89cdbb06d79130b26fde1a42e80d 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 4.7E-43 T 15-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 Gene3D G3DSA:3.40.47.10 2 429 5.9E-145 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 SUPERFAMILY SSF52151 521 801 5.49E-55 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 Gene3D G3DSA:3.30.70.3290 444 847 6.1E-111 T 15-10-2018 XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 SUPERFAMILY SSF51735 895 1106 7.48E-5 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 379 489 4.3E-18 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 Gene3D G3DSA:3.30.559.10 1483 1845 3.5E-117 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 SUPERFAMILY SSF52777 1661 1906 1.22E-48 T 15-10-2018 XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 Pfam PF00668 Condensation domain 1478 1909 8.0E-103 T 15-10-2018 IPR001242 Condensation domain XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 Pfam PF00550 Phosphopantetheine attachment site 1398 1459 2.4E-12 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 SUPERFAMILY SSF51735 1125 1305 5.62E-22 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 524 817 3.8E-55 T 15-10-2018 IPR020801 Polyketide synthase, acyl transferase domain XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 166 182 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 SUPERFAMILY SSF53901 3 425 8.49E-73 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 Gene3D G3DSA:3.40.366.10 520 818 6.1E-111 T 15-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 Gene3D G3DSA:3.40.50.720 1000 1358 2.0E-56 T 15-10-2018 XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 261 376 1.4E-38 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 Pfam PF00698 Acyl transferase domain 522 787 7.9E-36 T 15-10-2018 IPR014043 Acyl transferase XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1421 1436 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 Pfam PF08659 KR domain 1126 1307 1.1E-31 T 15-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 Gene3D G3DSA:3.30.70.250 648 709 6.1E-111 T 15-10-2018 XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 SUPERFAMILY SSF47336 1390 1458 3.4E-16 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 6 251 7.0E-63 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1126 1309 4.8E-13 T 15-10-2018 XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 SMART SM00825 Beta-ketoacyl synthase 7 430 6.2E-148 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 Gene3D G3DSA:3.30.559.30 1656 1901 3.5E-117 T 15-10-2018 XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 SUPERFAMILY SSF52777 1475 1647 1.67E-36 T 15-10-2018 XDD1_1798 fccd6796c948fa9fd2e897d551a2d036 1926 Gene3D G3DSA:1.10.1200.10 1385 1468 3.5E-19 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2911 505546d934b243aa79352f88887f95ff 123 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 43 123 4.1E-30 T 15-10-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly XDD1_2067 cb7a367bc800c47a0f1b619a6a6449c8 1200 Gene3D G3DSA:3.40.50.300 835 1021 7.3E-27 T 15-10-2018 XDD1_2067 cb7a367bc800c47a0f1b619a6a6449c8 1200 SUPERFAMILY SSF52540 267 1052 1.19E-27 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2067 cb7a367bc800c47a0f1b619a6a6449c8 1200 Pfam PF13087 AAA domain 826 999 2.0E-22 T 15-10-2018 XDD1_2067 cb7a367bc800c47a0f1b619a6a6449c8 1200 Pfam PF13091 PLD-like domain 1056 1162 5.5E-7 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 XDD1_2067 cb7a367bc800c47a0f1b619a6a6449c8 1200 Gene3D G3DSA:3.30.870.10 1022 1197 4.6E-11 T 15-10-2018 XDD1_2067 cb7a367bc800c47a0f1b619a6a6449c8 1200 Gene3D G3DSA:3.40.50.300 182 489 7.5E-13 T 15-10-2018 XDD1_2067 cb7a367bc800c47a0f1b619a6a6449c8 1200 SUPERFAMILY SSF56024 1032 1194 4.71E-13 T 15-10-2018 XDD1_1750 2c5e79d0882d54c532aee2d2491e2790 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 5.7E-26 T 15-10-2018 XDD1_1750 2c5e79d0882d54c532aee2d2491e2790 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 5.7E-26 T 15-10-2018 XDD1_1750 2c5e79d0882d54c532aee2d2491e2790 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 5.7E-26 T 15-10-2018 XDD1_1750 2c5e79d0882d54c532aee2d2491e2790 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 5.7E-26 T 15-10-2018 XDD1_1750 2c5e79d0882d54c532aee2d2491e2790 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 5.7E-26 T 15-10-2018 XDD1_1750 2c5e79d0882d54c532aee2d2491e2790 463 PRINTS PR00173 Glutamate-aspartate symporter signature 31 51 5.7E-26 T 15-10-2018 XDD1_1750 2c5e79d0882d54c532aee2d2491e2790 463 Gene3D G3DSA:1.10.3860.10 18 459 6.0E-106 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XDD1_1750 2c5e79d0882d54c532aee2d2491e2790 463 Pfam PF00375 Sodium:dicarboxylate symporter family 29 442 9.4E-103 T 15-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 XDD1_1750 2c5e79d0882d54c532aee2d2491e2790 463 SUPERFAMILY SSF118215 29 442 6.54E-97 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XDD1_0831 e2cc9d5fe4b1c7cfcab81a379725487b 222 PIRSF PIRSF011489 28 221 1.4E-76 T 15-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 XDD1_0831 e2cc9d5fe4b1c7cfcab81a379725487b 222 Pfam PF04336 Acyl carrier protein phosphodiesterase 108 213 4.3E-27 T 15-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 XDD1_3528 8826f3b005ab4de7e40a0e94da2dae69 478 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 475 1.7E-156 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XDD1_3528 8826f3b005ab4de7e40a0e94da2dae69 478 PRINTS PR00045 Sigma-54 factor signature 393 404 1.5E-31 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XDD1_3528 8826f3b005ab4de7e40a0e94da2dae69 478 PRINTS PR00045 Sigma-54 factor signature 377 389 1.5E-31 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XDD1_3528 8826f3b005ab4de7e40a0e94da2dae69 478 PRINTS PR00045 Sigma-54 factor signature 187 204 1.5E-31 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XDD1_3528 8826f3b005ab4de7e40a0e94da2dae69 478 PRINTS PR00045 Sigma-54 factor signature 451 469 1.5E-31 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XDD1_3528 8826f3b005ab4de7e40a0e94da2dae69 478 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 456 463 - T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XDD1_3528 8826f3b005ab4de7e40a0e94da2dae69 478 Pfam PF04963 Sigma-54 factor, core binding domain 115 304 4.7E-60 T 15-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 XDD1_3528 8826f3b005ab4de7e40a0e94da2dae69 478 Gene3D G3DSA:1.10.10.60 418 475 1.1E-23 T 15-10-2018 XDD1_3528 8826f3b005ab4de7e40a0e94da2dae69 478 Gene3D G3DSA:1.10.10.1330 117 252 2.5E-25 T 15-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily XDD1_3528 8826f3b005ab4de7e40a0e94da2dae69 478 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 365 384 - T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XDD1_3528 8826f3b005ab4de7e40a0e94da2dae69 478 Pfam PF04552 Sigma-54, DNA binding domain 319 476 2.4E-70 T 15-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding XDD1_3528 8826f3b005ab4de7e40a0e94da2dae69 478 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 5.0E-16 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XDD1_3528 8826f3b005ab4de7e40a0e94da2dae69 478 PIRSF PIRSF000774 1 478 3.3E-152 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XDD1_2795 49256a726d4f8de97d27657ac665d241 550 Gene3D G3DSA:3.40.50.620 271 549 2.2E-112 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_2795 49256a726d4f8de97d27657ac665d241 550 PIRSF PIRSF006630 12 264 2.6E-82 T 15-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 XDD1_2795 49256a726d4f8de97d27657ac665d241 550 PIRSF PIRSF006630 259 549 8.3E-124 T 15-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 XDD1_2795 49256a726d4f8de97d27657ac665d241 550 Pfam PF02540 NAD synthase 274 522 2.7E-73 T 15-10-2018 IPR022310 NAD/GMP synthase XDD1_2795 49256a726d4f8de97d27657ac665d241 550 Pfam PF00795 Carbon-nitrogen hydrolase 17 247 5.8E-23 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 XDD1_2795 49256a726d4f8de97d27657ac665d241 550 TIGRFAM TIGR00552 nadE: NAD+ synthetase 280 526 1.4E-60 T 15-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 XDD1_2795 49256a726d4f8de97d27657ac665d241 550 SUPERFAMILY SSF56317 13 251 7.85E-60 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XDD1_2795 49256a726d4f8de97d27657ac665d241 550 SUPERFAMILY SSF52402 264 531 1.55E-77 T 15-10-2018 XDD1_2795 49256a726d4f8de97d27657ac665d241 550 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 15 547 28.318 T 15-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 XDD1_2795 49256a726d4f8de97d27657ac665d241 550 Gene3D G3DSA:3.60.110.10 11 268 8.2E-84 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XDD1_0796 123efd590a7a6b27af05625f30e0be31 276 Pfam PF00248 Aldo/keto reductase family 18 192 1.8E-32 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain XDD1_0796 123efd590a7a6b27af05625f30e0be31 276 Pfam PF00248 Aldo/keto reductase family 202 261 3.5E-10 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain XDD1_0796 123efd590a7a6b27af05625f30e0be31 276 Gene3D G3DSA:3.20.20.100 1 275 4.7E-113 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XDD1_0796 123efd590a7a6b27af05625f30e0be31 276 PRINTS PR00069 Aldo-keto reductase signature 37 61 1.9E-42 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 XDD1_0796 123efd590a7a6b27af05625f30e0be31 276 PRINTS PR00069 Aldo-keto reductase signature 157 186 1.9E-42 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 XDD1_0796 123efd590a7a6b27af05625f30e0be31 276 PRINTS PR00069 Aldo-keto reductase signature 196 220 1.9E-42 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 XDD1_0796 123efd590a7a6b27af05625f30e0be31 276 PRINTS PR00069 Aldo-keto reductase signature 91 109 1.9E-42 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 XDD1_0796 123efd590a7a6b27af05625f30e0be31 276 PRINTS PR00069 Aldo-keto reductase signature 123 140 1.9E-42 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 XDD1_0796 123efd590a7a6b27af05625f30e0be31 276 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 15-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 XDD1_0796 123efd590a7a6b27af05625f30e0be31 276 SUPERFAMILY SSF51430 7 268 3.93E-83 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XDD1_0796 123efd590a7a6b27af05625f30e0be31 276 PIRSF PIRSF000097 1 274 1.1E-90 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 XDD1_0796 123efd590a7a6b27af05625f30e0be31 276 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 15-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 XDD1_3393 e83680a9e27405a332a4a8478f85bca5 473 Gene3D G3DSA:2.60.40.420 166 346 6.4E-55 T 15-10-2018 IPR008972 Cupredoxin XDD1_3393 e83680a9e27405a332a4a8478f85bca5 473 Pfam PF07732 Multicopper oxidase 53 168 6.6E-26 T 15-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 XDD1_3393 e83680a9e27405a332a4a8478f85bca5 473 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 469 56.426 T 15-10-2018 IPR026589 Cell division protein FtsP GO:0043093 XDD1_3393 e83680a9e27405a332a4a8478f85bca5 473 SUPERFAMILY SSF49503 3 167 1.62E-25 T 15-10-2018 IPR008972 Cupredoxin XDD1_3393 e83680a9e27405a332a4a8478f85bca5 473 SUPERFAMILY SSF49503 322 468 1.43E-17 T 15-10-2018 IPR008972 Cupredoxin XDD1_3393 e83680a9e27405a332a4a8478f85bca5 473 Gene3D G3DSA:2.60.40.420 29 165 1.6E-31 T 15-10-2018 IPR008972 Cupredoxin XDD1_3393 e83680a9e27405a332a4a8478f85bca5 473 Pfam PF07731 Multicopper oxidase 356 470 4.0E-15 T 15-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 XDD1_3393 e83680a9e27405a332a4a8478f85bca5 473 SUPERFAMILY SSF49503 173 288 2.71E-29 T 15-10-2018 IPR008972 Cupredoxin XDD1_3393 e83680a9e27405a332a4a8478f85bca5 473 Gene3D G3DSA:2.60.40.420 348 472 4.7E-23 T 15-10-2018 IPR008972 Cupredoxin XDD1_1746 516f4c54721ecc3e9a04e7773823a803 165 Pfam PF13185 GAF domain 45 143 2.5E-9 T 15-10-2018 IPR003018 GAF domain GO:0005515 XDD1_1746 516f4c54721ecc3e9a04e7773823a803 165 SMART SM00065 23 161 4.1E-5 T 15-10-2018 IPR003018 GAF domain GO:0005515 XDD1_1746 516f4c54721ecc3e9a04e7773823a803 165 Gene3D G3DSA:3.30.450.40 1 164 4.1E-64 T 15-10-2018 IPR029016 GAF-like domain superfamily XDD1_1746 516f4c54721ecc3e9a04e7773823a803 165 SUPERFAMILY SSF55781 3 149 2.7E-40 T 15-10-2018 XDD1_0867 cf177dec73aebd5c1cd46e021bb97d88 660 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 3 647 0.0 T 15-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 XDD1_0867 cf177dec73aebd5c1cd46e021bb97d88 660 Gene3D G3DSA:1.20.210.10 30 566 2.6E-189 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0867 cf177dec73aebd5c1cd46e021bb97d88 660 SUPERFAMILY SSF81442 43 558 1.57E-177 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0867 cf177dec73aebd5c1cd46e021bb97d88 660 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 1.5E-134 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0867 cf177dec73aebd5c1cd46e021bb97d88 660 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 15-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0867 cf177dec73aebd5c1cd46e021bb97d88 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 5.9E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0867 cf177dec73aebd5c1cd46e021bb97d88 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 5.9E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0867 cf177dec73aebd5c1cd46e021bb97d88 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 5.9E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0867 cf177dec73aebd5c1cd46e021bb97d88 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 5.9E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0867 cf177dec73aebd5c1cd46e021bb97d88 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 5.9E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0867 cf177dec73aebd5c1cd46e021bb97d88 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 5.9E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0867 cf177dec73aebd5c1cd46e021bb97d88 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 5.9E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0867 cf177dec73aebd5c1cd46e021bb97d88 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 5.9E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0867 cf177dec73aebd5c1cd46e021bb97d88 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 5.9E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0867 cf177dec73aebd5c1cd46e021bb97d88 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 5.9E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0867 cf177dec73aebd5c1cd46e021bb97d88 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 5.9E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0867 cf177dec73aebd5c1cd46e021bb97d88 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 5.9E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_3855 f39f4542e5116861aeebf1a236b27ead 328 Gene3D G3DSA:1.10.3720.10 80 326 4.7E-32 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_3855 f39f4542e5116861aeebf1a236b27ead 328 SUPERFAMILY SSF161098 40 314 1.21E-32 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_3855 f39f4542e5116861aeebf1a236b27ead 328 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 28 321 1.4E-93 T 15-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 XDD1_3855 f39f4542e5116861aeebf1a236b27ead 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 318 1.4E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_2088 d484ef4490515d1faced03c576bcc506 227 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 103 3.5E-29 T 15-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 XDD1_2088 d484ef4490515d1faced03c576bcc506 227 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 123 224 2.4E-30 T 15-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 XDD1_2088 d484ef4490515d1faced03c576bcc506 227 Gene3D G3DSA:3.30.750.120 1 115 1.6E-35 T 15-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily XDD1_2088 d484ef4490515d1faced03c576bcc506 227 SUPERFAMILY SSF63848 121 226 1.05E-30 T 15-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 XDD1_2088 d484ef4490515d1faced03c576bcc506 227 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 226 8.4E-66 T 15-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 XDD1_2088 d484ef4490515d1faced03c576bcc506 227 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 227 27.321 T 15-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 XDD1_2088 d484ef4490515d1faced03c576bcc506 227 Gene3D G3DSA:2.160.20.70 118 227 2.2E-29 T 15-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 XDD1_3016 a60f39d82bdb275379c22a17b73ca658 306 PIRSF PIRSF039102 1 45 5.5E-8 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XDD1_3016 a60f39d82bdb275379c22a17b73ca658 306 PIRSF PIRSF039102 35 306 2.7E-91 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XDD1_3016 a60f39d82bdb275379c22a17b73ca658 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 15-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XDD1_3016 a60f39d82bdb275379c22a17b73ca658 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 36.212 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XDD1_3016 a60f39d82bdb275379c22a17b73ca658 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 2.1E-18 T 15-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XDD1_3016 a60f39d82bdb275379c22a17b73ca658 306 Gene3D G3DSA:3.30.1490.20 111 183 4.9E-81 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XDD1_3016 a60f39d82bdb275379c22a17b73ca658 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 303 2.8E-63 T 15-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XDD1_3016 a60f39d82bdb275379c22a17b73ca658 306 Gene3D G3DSA:3.40.50.20 1 84 1.1E-31 T 15-10-2018 XDD1_3016 a60f39d82bdb275379c22a17b73ca658 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 15-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XDD1_3016 a60f39d82bdb275379c22a17b73ca658 306 SUPERFAMILY SSF52440 3 96 4.51E-29 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XDD1_3016 a60f39d82bdb275379c22a17b73ca658 306 SUPERFAMILY SSF56059 97 302 2.89E-61 T 15-10-2018 XDD1_3016 a60f39d82bdb275379c22a17b73ca658 306 Gene3D G3DSA:3.30.470.20 85 301 4.9E-81 T 15-10-2018 XDD1_3016 a60f39d82bdb275379c22a17b73ca658 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 7.0E-106 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XDD1_1287 f68fc7ad8b64dcbea03925ce3ff3d992 128 SUPERFAMILY SSF56276 16 124 1.49E-31 T 15-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 XDD1_1287 f68fc7ad8b64dcbea03925ce3ff3d992 128 Gene3D G3DSA:3.60.90.10 5 128 8.0E-39 T 15-10-2018 XDD1_1287 f68fc7ad8b64dcbea03925ce3ff3d992 128 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 12 127 24.84 T 15-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XDD1_1287 f68fc7ad8b64dcbea03925ce3ff3d992 128 Pfam PF02675 S-adenosylmethionine decarboxylase 18 123 4.3E-34 T 15-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XDD1_1287 f68fc7ad8b64dcbea03925ce3ff3d992 128 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 15 123 1.9E-33 T 15-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XDD1_1180 f3f6d626eb63e4c160ea62bc420e52e6 769 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 752 769 - T 15-10-2018 IPR010917 TonB-dependent receptor, conserved site XDD1_1180 f3f6d626eb63e4c160ea62bc420e52e6 769 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 76 769 3.7E-142 T 15-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 XDD1_1180 f3f6d626eb63e4c160ea62bc420e52e6 769 Gene3D G3DSA:2.170.130.10 70 185 2.4E-28 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XDD1_1180 f3f6d626eb63e4c160ea62bc420e52e6 769 Gene3D G3DSA:2.40.170.20 186 769 1.8E-92 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XDD1_1180 f3f6d626eb63e4c160ea62bc420e52e6 769 Pfam PF07715 TonB-dependent Receptor Plug Domain 74 173 2.9E-15 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain XDD1_1180 f3f6d626eb63e4c160ea62bc420e52e6 769 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 72 769 1.2E-115 T 15-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 XDD1_1180 f3f6d626eb63e4c160ea62bc420e52e6 769 Pfam PF00593 TonB dependent receptor 262 766 9.9E-44 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XDD1_1180 f3f6d626eb63e4c160ea62bc420e52e6 769 SUPERFAMILY SSF56935 70 769 2.12E-85 T 15-10-2018 XDD1_3864 1d027761235930e55394764cce9adc0b 160 Gene3D G3DSA:1.10.287.180 2 77 5.4E-29 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 XDD1_3864 1d027761235930e55394764cce9adc0b 160 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 15-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 XDD1_3864 1d027761235930e55394764cce9adc0b 160 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 4 157 1.4E-68 T 15-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 XDD1_3864 1d027761235930e55394764cce9adc0b 160 SUPERFAMILY SSF46557 4 79 9.42E-27 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 XDD1_3864 1d027761235930e55394764cce9adc0b 160 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 15-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 XDD1_3864 1d027761235930e55394764cce9adc0b 160 PIRSF PIRSF006092 1 158 7.1E-58 T 15-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 XDD1_3864 1d027761235930e55394764cce9adc0b 160 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 155 28.976 T 15-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 XDD1_3864 1d027761235930e55394764cce9adc0b 160 Pfam PF03449 Transcription elongation factor, N-terminal 6 75 4.9E-25 T 15-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 XDD1_3864 1d027761235930e55394764cce9adc0b 160 Hamap MF_00930 Transcription elongation factor GreB [greB]. 2 157 52.756 T 15-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 XDD1_3864 1d027761235930e55394764cce9adc0b 160 Gene3D G3DSA:3.10.50.30 79 158 5.0E-32 T 15-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 XDD1_3864 1d027761235930e55394764cce9adc0b 160 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 2.1E-26 T 15-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 XDD1_3864 1d027761235930e55394764cce9adc0b 160 SUPERFAMILY SSF54534 81 156 2.22E-23 T 15-10-2018 XDD1_1397 a898448ea7c1508c3359240211105ce3 690 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 180 225 1.1E-4 T 15-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain XDD1_1397 a898448ea7c1508c3359240211105ce3 690 Pfam PF12696 TraM recognition site of TraD and TraG 508 634 3.3E-11 T 15-10-2018 IPR032689 TraD/TraG, TraM recognition site XDD1_1397 a898448ea7c1508c3359240211105ce3 690 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 655 0.0 T 15-10-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 XDD1_1397 a898448ea7c1508c3359240211105ce3 690 SUPERFAMILY SSF52540 144 654 2.86E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1397 a898448ea7c1508c3359240211105ce3 690 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 655 8.6E-262 T 15-10-2018 IPR022458 Conjugative coupling factor TraG/TraD XDD1_1397 a898448ea7c1508c3359240211105ce3 690 Gene3D G3DSA:3.40.50.300 427 658 2.5E-26 T 15-10-2018 XDD1_1397 a898448ea7c1508c3359240211105ce3 690 Gene3D G3DSA:3.40.50.300 134 250 8.8E-11 T 15-10-2018 XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 SUPERFAMILY SSF52777 1584 1778 6.23E-20 T 15-10-2018 XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 SUPERFAMILY SSF56801 482 1004 4.71E-86 T 15-10-2018 XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 Gene3D G3DSA:3.40.50.12780 2053 2447 1.3E-79 T 15-10-2018 XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 Gene3D G3DSA:3.30.300.30 2448 2551 1.6E-18 T 15-10-2018 XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 Gene3D G3DSA:3.30.559.30 1765 1988 4.2E-56 T 15-10-2018 XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 Gene3D G3DSA:3.40.50.12780 481 892 2.4E-76 T 15-10-2018 XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 Gene3D G3DSA:1.10.1200.10 2552 2638 7.4E-19 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 SUPERFAMILY SSF47336 1046 1092 4.45E-6 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 Gene3D G3DSA:3.30.300.30 893 1007 8.3E-11 T 15-10-2018 XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 SMART SM00823 Phosphopantetheine attachment site 2566 2635 0.0036 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2201 2212 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 SUPERFAMILY SSF56801 2071 2577 6.15E-99 T 15-10-2018 XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 SUPERFAMILY SSF52777 8 198 5.67E-14 T 15-10-2018 XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 Gene3D G3DSA:3.30.559.10 1105 1278 1.8E-19 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 Pfam PF00501 AMP-binding enzyme 2070 2452 1.5E-62 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 Pfam PF00501 AMP-binding enzyme 498 899 1.7E-62 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 SUPERFAMILY SSF47336 2566 2631 4.32E-15 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 SUPERFAMILY SSF52777 1769 1979 1.78E-23 T 15-10-2018 XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 Gene3D G3DSA:3.30.559.10 8 205 1.4E-17 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 SUPERFAMILY SSF52777 1129 1272 1.67E-12 T 15-10-2018 XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 Gene3D G3DSA:1.10.1200.10 1033 1094 3.4E-6 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 ProSitePatterns PS00455 Putative AMP-binding domain signature. 636 647 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 Gene3D G3DSA:3.30.559.10 1591 1967 4.2E-56 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 Pfam PF00550 Phosphopantetheine attachment site 1046 1093 1.4E-6 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 Pfam PF00550 Phosphopantetheine attachment site 2568 2631 1.0E-13 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 SUPERFAMILY SSF52777 229 369 8.0E-5 T 15-10-2018 XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 Pfam PF00668 Condensation domain 1595 1979 2.5E-36 T 15-10-2018 IPR001242 Condensation domain XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 Pfam PF00668 Condensation domain 4 203 1.0E-9 T 15-10-2018 IPR001242 Condensation domain XDD1_1791 7c158933e14b6de88b7540fc4f335d61 2680 Pfam PF00668 Condensation domain 1127 1291 3.5E-8 T 15-10-2018 IPR001242 Condensation domain XDD1_1343 18d5e2242a824412368b322d9df94f00 403 Pfam PF02817 e3 binding domain 113 146 7.5E-13 T 15-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 XDD1_1343 18d5e2242a824412368b322d9df94f00 403 SUPERFAMILY SSF47005 105 150 3.66E-11 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 XDD1_1343 18d5e2242a824412368b322d9df94f00 403 Pfam PF00364 Biotin-requiring enzyme 5 77 4.1E-19 T 15-10-2018 IPR000089 Biotin/lipoyl attachment XDD1_1343 18d5e2242a824412368b322d9df94f00 403 SUPERFAMILY SSF51230 2 93 9.42E-25 T 15-10-2018 IPR011053 Single hybrid motif XDD1_1343 18d5e2242a824412368b322d9df94f00 403 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 XDD1_1343 18d5e2242a824412368b322d9df94f00 403 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 173 401 1.7E-81 T 15-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 XDD1_1343 18d5e2242a824412368b322d9df94f00 403 SUPERFAMILY SSF52777 173 402 8.45E-90 T 15-10-2018 XDD1_1343 18d5e2242a824412368b322d9df94f00 403 Gene3D G3DSA:4.10.320.10 102 151 4.5E-23 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 XDD1_1343 18d5e2242a824412368b322d9df94f00 403 Gene3D G3DSA:3.30.559.10 171 403 2.1E-97 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_1343 18d5e2242a824412368b322d9df94f00 403 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 403 3.1E-189 T 15-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 XDD1_1343 18d5e2242a824412368b322d9df94f00 403 Gene3D G3DSA:2.40.50.100 2 80 3.2E-23 T 15-10-2018 XDD1_1219 e4036fe63275abefceea934fe99b9b46 110 Gene3D G3DSA:3.30.160.100 1 107 3.6E-37 T 15-10-2018 IPR036567 Ribosome hibernation promotion factor-like XDD1_1219 e4036fe63275abefceea934fe99b9b46 110 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 1.7E-22 T 15-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 XDD1_1219 e4036fe63275abefceea934fe99b9b46 110 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 2.4E-33 T 15-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 XDD1_1219 e4036fe63275abefceea934fe99b9b46 110 SUPERFAMILY SSF69754 3 102 1.02E-32 T 15-10-2018 IPR036567 Ribosome hibernation promotion factor-like XDD1_0382 e933542518fa8ef57c6c6ad7b14dda00 332 Pfam PF12146 Serine aminopeptidase, S33 54 315 2.1E-48 T 15-10-2018 IPR022742 Serine aminopeptidase, S33 XDD1_0382 e933542518fa8ef57c6c6ad7b14dda00 332 SUPERFAMILY SSF53474 15 332 7.75E-33 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_0382 e933542518fa8ef57c6c6ad7b14dda00 332 Gene3D G3DSA:3.40.50.1820 28 332 1.4E-37 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_3033 b151f241632f5d71da01ca574c81658d 534 Gene3D G3DSA:3.20.20.70 1 277 1.6E-108 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_3033 b151f241632f5d71da01ca574c81658d 534 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 3.5E-245 T 15-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XDD1_3033 b151f241632f5d71da01ca574c81658d 534 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 42.965 T 15-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XDD1_3033 b151f241632f5d71da01ca574c81658d 534 Pfam PF00682 HMGL-like 4 273 2.0E-103 T 15-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 XDD1_3033 b151f241632f5d71da01ca574c81658d 534 Gene3D G3DSA:1.10.238.260 280 392 5.8E-34 T 15-10-2018 XDD1_3033 b151f241632f5d71da01ca574c81658d 534 Gene3D G3DSA:3.30.160.270 393 500 1.1E-6 T 15-10-2018 XDD1_3033 b151f241632f5d71da01ca574c81658d 534 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 1.2E-32 T 15-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XDD1_3033 b151f241632f5d71da01ca574c81658d 534 SUPERFAMILY SSF51569 1 291 1.41E-99 T 15-10-2018 XDD1_3033 b151f241632f5d71da01ca574c81658d 534 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XDD1_3033 b151f241632f5d71da01ca574c81658d 534 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XDD1_3033 b151f241632f5d71da01ca574c81658d 534 SMART SM00917 369 500 5.3E-35 T 15-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XDD1_3033 b151f241632f5d71da01ca574c81658d 534 SUPERFAMILY SSF110921 391 499 6.67E-22 T 15-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XDD1_3674 cf65aa4ee6021d891ed989cc16991e8a 329 Gene3D G3DSA:1.20.1270.170 150 308 2.6E-120 T 15-10-2018 XDD1_3674 cf65aa4ee6021d891ed989cc16991e8a 329 SUPERFAMILY SSF56112 7 326 2.77E-85 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily XDD1_3674 cf65aa4ee6021d891ed989cc16991e8a 329 Gene3D G3DSA:1.10.510.10 61 259 2.6E-120 T 15-10-2018 XDD1_3674 cf65aa4ee6021d891ed989cc16991e8a 329 Gene3D G3DSA:3.30.200.70 14 109 2.6E-120 T 15-10-2018 XDD1_3674 cf65aa4ee6021d891ed989cc16991e8a 329 Hamap MF_01497 Stress response kinase A [srkA]. 5 319 45.131 T 15-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 XDD1_3674 cf65aa4ee6021d891ed989cc16991e8a 329 Pfam PF01636 Phosphotransferase enzyme family 33 254 9.2E-39 T 15-10-2018 IPR002575 Aminoglycoside phosphotransferase XDD1_1809 a9933d58b9e8a7f74bc2435150aceeb3 265 SUPERFAMILY SSF52540 6 237 6.8E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1809 a9933d58b9e8a7f74bc2435150aceeb3 265 Pfam PF00005 ABC transporter 27 175 1.0E-25 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1809 a9933d58b9e8a7f74bc2435150aceeb3 265 SMART SM00382 35 224 8.7E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1809 a9933d58b9e8a7f74bc2435150aceeb3 265 Gene3D G3DSA:3.40.50.300 4 265 2.2E-75 T 15-10-2018 XDD1_1809 a9933d58b9e8a7f74bc2435150aceeb3 265 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_0319 14f7f4523c4cc4335071475531a81a09 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 47 0.0011 T 15-10-2018 IPR001451 Hexapeptide repeat XDD1_0319 14f7f4523c4cc4335071475531a81a09 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 8.3E-9 T 15-10-2018 IPR001451 Hexapeptide repeat XDD1_0319 14f7f4523c4cc4335071475531a81a09 184 Gene3D G3DSA:2.160.10.10 1 184 2.6E-57 T 15-10-2018 XDD1_0319 14f7f4523c4cc4335071475531a81a09 184 SUPERFAMILY SSF51161 5 176 3.47E-46 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily XDD1_2414 a049fb84cc7b44263eb6e3ce0e98823d 237 Gene3D G3DSA:3.30.200.20 7 231 5.0E-91 T 15-10-2018 XDD1_2414 a049fb84cc7b44263eb6e3ce0e98823d 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 15-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XDD1_2414 a049fb84cc7b44263eb6e3ce0e98823d 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.459 T 15-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XDD1_2414 a049fb84cc7b44263eb6e3ce0e98823d 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 15-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XDD1_2414 a049fb84cc7b44263eb6e3ce0e98823d 237 SUPERFAMILY SSF56104 4 232 5.89E-75 T 15-10-2018 XDD1_2414 a049fb84cc7b44263eb6e3ce0e98823d 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 5.8E-80 T 15-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 XDD1_2414 a049fb84cc7b44263eb6e3ce0e98823d 237 Pfam PF01259 SAICAR synthetase 7 231 6.0E-59 T 15-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XDD1_2414 a049fb84cc7b44263eb6e3ce0e98823d 237 Gene3D G3DSA:3.30.470.20 85 220 5.0E-91 T 15-10-2018 XDD1_2370 ba1a157b64876f411401254fe7733f05 295 Pfam PF01739 CheR methyltransferase, SAM binding domain 95 283 3.4E-58 T 15-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal XDD1_2370 ba1a157b64876f411401254fe7733f05 295 SMART SM00138 27 288 4.3E-105 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 XDD1_2370 ba1a157b64876f411401254fe7733f05 295 Gene3D G3DSA:3.40.50.150 94 288 1.1E-68 T 15-10-2018 XDD1_2370 ba1a157b64876f411401254fe7733f05 295 SUPERFAMILY SSF53335 95 285 2.94E-56 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_2370 ba1a157b64876f411401254fe7733f05 295 Pfam PF03705 CheR methyltransferase, all-alpha domain 29 79 1.8E-18 T 15-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal XDD1_2370 ba1a157b64876f411401254fe7733f05 295 SUPERFAMILY SSF47757 19 94 7.32E-24 T 15-10-2018 XDD1_2370 ba1a157b64876f411401254fe7733f05 295 Gene3D G3DSA:1.10.155.10 14 93 6.3E-30 T 15-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily XDD1_2370 ba1a157b64876f411401254fe7733f05 295 PRINTS PR00996 Glutamate methyltransferase family signature 247 270 2.6E-47 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 XDD1_2370 ba1a157b64876f411401254fe7733f05 295 PRINTS PR00996 Glutamate methyltransferase family signature 228 242 2.6E-47 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 XDD1_2370 ba1a157b64876f411401254fe7733f05 295 PRINTS PR00996 Glutamate methyltransferase family signature 122 142 2.6E-47 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 XDD1_2370 ba1a157b64876f411401254fe7733f05 295 PRINTS PR00996 Glutamate methyltransferase family signature 49 62 2.6E-47 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 XDD1_2370 ba1a157b64876f411401254fe7733f05 295 PRINTS PR00996 Glutamate methyltransferase family signature 156 172 2.6E-47 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 XDD1_2370 ba1a157b64876f411401254fe7733f05 295 PRINTS PR00996 Glutamate methyltransferase family signature 88 100 2.6E-47 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 XDD1_2370 ba1a157b64876f411401254fe7733f05 295 PIRSF PIRSF000410 9 289 4.7E-99 T 15-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR XDD1_3515 13374eac37fa55a3dd01512b6a058683 420 SUPERFAMILY SSF55205 1 417 5.72E-144 T 15-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 XDD1_3515 13374eac37fa55a3dd01512b6a058683 420 Gene3D G3DSA:3.65.10.10 8 413 4.4E-172 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 XDD1_3515 13374eac37fa55a3dd01512b6a058683 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 44.065 T 15-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XDD1_3515 13374eac37fa55a3dd01512b6a058683 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 1.2E-182 T 15-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XDD1_3515 13374eac37fa55a3dd01512b6a058683 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 3.9E-124 T 15-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 XDD1_3515 13374eac37fa55a3dd01512b6a058683 420 Gene3D G3DSA:3.65.10.10 21 228 4.4E-172 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 XDD1_3291 7863f4e44098afcf562574508e6c7760 1160 Pfam PF14579 Helix-hairpin-helix motif 808 897 1.0E-24 T 15-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3291 7863f4e44098afcf562574508e6c7760 1160 Gene3D G3DSA:2.40.50.140 981 1079 7.4E-6 T 15-10-2018 XDD1_3291 7863f4e44098afcf562574508e6c7760 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1031 0.0 T 15-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3291 7863f4e44098afcf562574508e6c7760 1160 SUPERFAMILY SSF89550 6 263 1.35E-16 T 15-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 XDD1_3291 7863f4e44098afcf562574508e6c7760 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 734 7.1E-177 T 15-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3291 7863f4e44098afcf562574508e6c7760 1160 Gene3D G3DSA:3.20.20.140 1 270 9.4E-94 T 15-10-2018 XDD1_3291 7863f4e44098afcf562574508e6c7760 1160 Pfam PF01336 OB-fold nucleic acid binding domain 995 1071 1.5E-6 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 XDD1_3291 7863f4e44098afcf562574508e6c7760 1160 SMART SM00481 7 74 1.4E-27 T 15-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal XDD1_3291 7863f4e44098afcf562574508e6c7760 1160 Gene3D G3DSA:1.10.10.1600 433 510 1.6E-34 T 15-10-2018 XDD1_3291 7863f4e44098afcf562574508e6c7760 1160 Pfam PF02811 PHP domain 8 171 2.8E-42 T 15-10-2018 IPR004013 PHP domain GO:0003824 XDD1_3774 23949b52047bde8354b0dbcc7186abd1 477 SUPERFAMILY SSF63411 28 239 4.44E-22 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 XDD1_3774 23949b52047bde8354b0dbcc7186abd1 477 Pfam PF05193 Peptidase M16 inactive domain 200 372 3.0E-9 T 15-10-2018 IPR007863 Peptidase M16, C-terminal XDD1_3774 23949b52047bde8354b0dbcc7186abd1 477 SUPERFAMILY SSF63411 341 454 8.38E-5 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 XDD1_3774 23949b52047bde8354b0dbcc7186abd1 477 Pfam PF00675 Insulinase (Peptidase family M16) 51 157 6.5E-7 T 15-10-2018 IPR011765 Peptidase M16, N-terminal XDD1_3774 23949b52047bde8354b0dbcc7186abd1 477 Gene3D G3DSA:3.30.830.10 12 254 2.5E-36 T 15-10-2018 XDD1_3774 23949b52047bde8354b0dbcc7186abd1 477 Gene3D G3DSA:3.30.830.10 256 470 1.1E-86 T 15-10-2018 XDD1_2298 f255666a6195ddf6ddce12c514bfb985 240 SUPERFAMILY SSF88659 158 238 3.92E-21 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XDD1_2298 f255666a6195ddf6ddce12c514bfb985 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_2298 f255666a6195ddf6ddce12c514bfb985 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 6.1E-32 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 XDD1_2298 f255666a6195ddf6ddce12c514bfb985 240 Gene3D G3DSA:1.20.140.160 87 238 4.5E-46 T 15-10-2018 XDD1_2298 f255666a6195ddf6ddce12c514bfb985 240 Pfam PF04539 Sigma-70 region 3 97 166 3.5E-16 T 15-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 XDD1_2298 f255666a6195ddf6ddce12c514bfb985 240 Pfam PF04545 Sigma-70, region 4 186 234 9.0E-18 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 XDD1_2298 f255666a6195ddf6ddce12c514bfb985 240 Pfam PF04542 Sigma-70 region 2 16 88 1.7E-16 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 XDD1_2298 f255666a6195ddf6ddce12c514bfb985 240 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_2298 f255666a6195ddf6ddce12c514bfb985 240 PRINTS PR00046 Major sigma-70 factor signature 221 232 1.0E-13 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_2298 f255666a6195ddf6ddce12c514bfb985 240 PRINTS PR00046 Major sigma-70 factor signature 206 221 1.0E-13 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_2298 f255666a6195ddf6ddce12c514bfb985 240 PRINTS PR00046 Major sigma-70 factor signature 43 56 1.0E-13 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_2298 f255666a6195ddf6ddce12c514bfb985 240 PRINTS PR00046 Major sigma-70 factor signature 67 75 1.0E-13 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_2298 f255666a6195ddf6ddce12c514bfb985 240 PRINTS PR00046 Major sigma-70 factor signature 189 201 1.0E-13 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_2298 f255666a6195ddf6ddce12c514bfb985 240 Gene3D G3DSA:1.10.1740.10 4 85 2.0E-27 T 15-10-2018 XDD1_2298 f255666a6195ddf6ddce12c514bfb985 240 SUPERFAMILY SSF88946 5 88 1.57E-23 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 XDD1_2298 f255666a6195ddf6ddce12c514bfb985 240 PIRSF PIRSF000770 3 240 5.3E-40 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_2298 f255666a6195ddf6ddce12c514bfb985 240 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 3.0E-85 T 15-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 XDD1_2298 f255666a6195ddf6ddce12c514bfb985 240 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 61.075 T 15-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 XDD1_2298 f255666a6195ddf6ddce12c514bfb985 240 SUPERFAMILY SSF88659 90 152 4.19E-14 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XDD1_1453 cc419f893903b4d3dd835bd24906a534 107 Pfam PF01710 Transposase 1 106 7.5E-22 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 XDD1_1453 cc419f893903b4d3dd835bd24906a534 107 SUPERFAMILY SSF46689 3 93 6.09E-5 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1872 0cb56afedea6f0b8fe0a3bd6575dc8ef 295 SUPERFAMILY SSF161098 89 275 5.76E-23 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_1872 0cb56afedea6f0b8fe0a3bd6575dc8ef 295 Gene3D G3DSA:1.10.3720.10 85 292 8.1E-20 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_1872 0cb56afedea6f0b8fe0a3bd6575dc8ef 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 294 8.2E-23 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_1872 0cb56afedea6f0b8fe0a3bd6575dc8ef 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 1.1E-5 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain XDD1_2996 7370ff4e245cd9834ad85020f4cc007c 887 SUPERFAMILY SSF52518 474 701 4.71E-99 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_2996 7370ff4e245cd9834ad85020f4cc007c 887 PIRSF PIRSF000156 1 887 0.0 T 15-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 XDD1_2996 7370ff4e245cd9834ad85020f4cc007c 887 Gene3D G3DSA:3.40.50.970 472 706 8.9E-112 T 15-10-2018 XDD1_2996 7370ff4e245cd9834ad85020f4cc007c 887 Gene3D G3DSA:3.40.50.970 57 471 6.8E-137 T 15-10-2018 XDD1_2996 7370ff4e245cd9834ad85020f4cc007c 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 15-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 XDD1_2996 7370ff4e245cd9834ad85020f4cc007c 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 361 426 1.9E-4 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XDD1_2996 7370ff4e245cd9834ad85020f4cc007c 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 106 297 2.2E-8 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XDD1_2996 7370ff4e245cd9834ad85020f4cc007c 887 Gene3D G3DSA:3.40.50.920 707 887 1.6E-74 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XDD1_2996 7370ff4e245cd9834ad85020f4cc007c 887 SUPERFAMILY SSF52518 59 466 2.64E-143 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_2996 7370ff4e245cd9834ad85020f4cc007c 887 SUPERFAMILY SSF52922 702 885 5.58E-63 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XDD1_2559 6df6cd94a01ae1a8f141fedfe0d0523e 871 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 5.2E-153 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XDD1_2559 6df6cd94a01ae1a8f141fedfe0d0523e 871 SUPERFAMILY SSF101904 533 866 5.75E-111 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal XDD1_2559 6df6cd94a01ae1a8f141fedfe0d0523e 871 Gene3D G3DSA:3.90.199.10 33 520 8.7E-236 T 15-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 XDD1_2559 6df6cd94a01ae1a8f141fedfe0d0523e 871 SUPERFAMILY SSF56719 30 521 1.7E-182 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XDD1_2559 6df6cd94a01ae1a8f141fedfe0d0523e 871 Gene3D G3DSA:1.10.268.10 370 493 8.7E-236 T 15-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XDD1_2559 6df6cd94a01ae1a8f141fedfe0d0523e 871 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 5.8E-10 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XDD1_2559 6df6cd94a01ae1a8f141fedfe0d0523e 871 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 1.2E-10 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XDD1_2559 6df6cd94a01ae1a8f141fedfe0d0523e 871 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 709 1.4 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XDD1_2559 6df6cd94a01ae1a8f141fedfe0d0523e 871 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 756 802 8.6E-14 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XDD1_2559 6df6cd94a01ae1a8f141fedfe0d0523e 871 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 806 852 2.2E-13 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XDD1_2559 6df6cd94a01ae1a8f141fedfe0d0523e 871 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 7.3E-10 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XDD1_2559 6df6cd94a01ae1a8f141fedfe0d0523e 871 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 721 750 9.8E-8 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XDD1_2559 6df6cd94a01ae1a8f141fedfe0d0523e 871 Gene3D G3DSA:3.30.1360.40 236 333 8.7E-236 T 15-10-2018 XDD1_2559 6df6cd94a01ae1a8f141fedfe0d0523e 871 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 854 24.727 T 15-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_2559 6df6cd94a01ae1a8f141fedfe0d0523e 871 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 853 0.0 T 15-10-2018 XDD1_2559 6df6cd94a01ae1a8f141fedfe0d0523e 871 Gene3D G3DSA:2.120.10.90 535 854 9.2E-129 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal XDD1_2559 6df6cd94a01ae1a8f141fedfe0d0523e 871 SMART SM00434 11 499 1.6E-300 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XDD1_3923 66737b172940060f8dae4eec89d09dd4 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 XDD1_3923 66737b172940060f8dae4eec89d09dd4 257 Gene3D G3DSA:3.90.226.10 2 199 6.6E-74 T 15-10-2018 XDD1_3923 66737b172940060f8dae4eec89d09dd4 257 SUPERFAMILY SSF52096 1 256 9.96E-87 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XDD1_3923 66737b172940060f8dae4eec89d09dd4 257 Gene3D G3DSA:1.10.12.10 200 256 1.7E-22 T 15-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal XDD1_3923 66737b172940060f8dae4eec89d09dd4 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 256 3.2E-75 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 XDD1_3253 f44cadaedc2f926d2a394793489d08fe 327 SUPERFAMILY SSF50129 3 146 6.34E-36 T 15-10-2018 IPR011032 GroES-like superfamily XDD1_3253 f44cadaedc2f926d2a394793489d08fe 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 90 4.5E-11 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XDD1_3253 f44cadaedc2f926d2a394793489d08fe 327 Gene3D G3DSA:3.90.180.10 11 321 1.2E-121 T 15-10-2018 XDD1_3253 f44cadaedc2f926d2a394793489d08fe 327 Gene3D G3DSA:3.40.50.720 124 269 1.2E-121 T 15-10-2018 XDD1_3253 f44cadaedc2f926d2a394793489d08fe 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 15-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 XDD1_3253 f44cadaedc2f926d2a394793489d08fe 327 SUPERFAMILY SSF51735 113 275 2.02E-48 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_3253 f44cadaedc2f926d2a394793489d08fe 327 Pfam PF00107 Zinc-binding dehydrogenase 152 259 1.1E-27 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XDD1_3253 f44cadaedc2f926d2a394793489d08fe 327 SMART SM00829 11 325 2.2E-35 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XDD1_0702 1165b54ca7905d6a141ef40fdc5206d7 991 SUPERFAMILY SSF55874 855 969 1.57E-15 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_0702 1165b54ca7905d6a141ef40fdc5206d7 991 Gene3D G3DSA:3.30.565.10 1 166 1.1E-21 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_0702 1165b54ca7905d6a141ef40fdc5206d7 991 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 882 968 1.4E-8 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_0702 1165b54ca7905d6a141ef40fdc5206d7 991 SMART SM00387 879 990 4.3E-9 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_0702 1165b54ca7905d6a141ef40fdc5206d7 991 SUPERFAMILY SSF55874 10 136 1.57E-18 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_0702 1165b54ca7905d6a141ef40fdc5206d7 991 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 140 1.1E-14 T 15-10-2018 XDD1_0702 1165b54ca7905d6a141ef40fdc5206d7 991 Gene3D G3DSA:3.30.565.10 840 988 4.5E-15 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 Gene3D G3DSA:1.20.58.930 362 457 1.5E-229 T 15-10-2018 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 76 343 4.6E-65 T 15-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 PRINTS PR01180 Arginine decarboxylase signature 172 193 1.5E-72 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 PRINTS PR01180 Arginine decarboxylase signature 489 514 1.5E-72 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 PRINTS PR01180 Arginine decarboxylase signature 323 340 1.5E-72 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 PRINTS PR01180 Arginine decarboxylase signature 92 106 1.5E-72 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 PRINTS PR01180 Arginine decarboxylase signature 196 218 1.5E-72 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 PRINTS PR01180 Arginine decarboxylase signature 68 83 1.5E-72 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 PRINTS PR01180 Arginine decarboxylase signature 464 485 1.5E-72 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 PRINTS PR01180 Arginine decarboxylase signature 542 563 1.5E-72 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 PRINTS PR01180 Arginine decarboxylase signature 146 161 1.5E-72 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 Gene3D G3DSA:3.20.20.10 69 345 1.5E-229 T 15-10-2018 IPR029066 PLP-binding barrel XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 SUPERFAMILY SSF50621 458 563 2.55E-7 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 2 633 41.777 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 PIRSF PIRSF001336 2 634 6.4E-250 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 Gene3D G3DSA:2.40.37.10 13 566 1.5E-229 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 TIGRFAM TIGR01273 speA: arginine decarboxylase 7 632 5.4E-265 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 SUPERFAMILY SSF51419 68 345 1.81E-67 T 15-10-2018 IPR029066 PLP-binding barrel XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 100 118 2.0E-18 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 122 134 2.0E-18 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 333 352 2.0E-18 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 239 252 2.0E-18 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XDD1_3139 2e9a483096849b180f7b1e8196eab509 634 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 542 555 2.0E-18 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XDD1_1446 8bce6332dcab3ea8cff938a92933bf80 370 SUPERFAMILY SSF52540 109 357 2.25E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1446 8bce6332dcab3ea8cff938a92933bf80 370 ProSitePatterns PS01215 Mrp family signature. 214 230 - T 15-10-2018 IPR000808 Mrp, conserved site GO:0005524 XDD1_1446 8bce6332dcab3ea8cff938a92933bf80 370 Gene3D G3DSA:3.40.50.300 101 349 3.3E-79 T 15-10-2018 XDD1_1446 8bce6332dcab3ea8cff938a92933bf80 370 Hamap MF_02040 Iron-sulfur cluster carrier protein. 102 351 36.683 T 15-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein XDD1_1446 8bce6332dcab3ea8cff938a92933bf80 370 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 107 350 7.1E-100 T 15-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 XDD1_1446 8bce6332dcab3ea8cff938a92933bf80 370 SUPERFAMILY SSF117916 14 91 3.27E-6 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily XDD1_2113 4765ffc200bd637bba93c00d449365ea 245 Pfam PF00005 ABC transporter 37 185 3.2E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_2113 4765ffc200bd637bba93c00d449365ea 245 SMART SM00382 46 241 8.6E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_2113 4765ffc200bd637bba93c00d449365ea 245 Gene3D G3DSA:3.40.50.300 14 242 3.1E-61 T 15-10-2018 XDD1_2113 4765ffc200bd637bba93c00d449365ea 245 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_2113 4765ffc200bd637bba93c00d449365ea 245 SUPERFAMILY SSF52540 16 239 2.21E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2650 e594e40f797242aeacacc7edf35217d7 336 Gene3D G3DSA:3.40.50.720 7 328 4.7E-106 T 15-10-2018 XDD1_2650 e594e40f797242aeacacc7edf35217d7 336 SUPERFAMILY SSF55347 132 318 3.27E-49 T 15-10-2018 XDD1_2650 e594e40f797242aeacacc7edf35217d7 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 119 3.3E-25 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 XDD1_2650 e594e40f797242aeacacc7edf35217d7 336 PIRSF PIRSF000148 4 336 1.1E-92 T 15-10-2018 XDD1_2650 e594e40f797242aeacacc7edf35217d7 336 Gene3D G3DSA:3.30.360.10 130 314 4.7E-106 T 15-10-2018 XDD1_2650 e594e40f797242aeacacc7edf35217d7 336 SMART SM00859 6 121 1.4E-28 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 XDD1_2650 e594e40f797242aeacacc7edf35217d7 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 316 1.4E-33 T 15-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XDD1_2650 e594e40f797242aeacacc7edf35217d7 336 SUPERFAMILY SSF51735 5 156 9.37E-42 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2101 99c89fa8e852a50bfee8b64bc4fbdcf1 1301 Pfam PF04408 Helicase associated domain (HA2) 466 558 6.4E-17 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 XDD1_2101 99c89fa8e852a50bfee8b64bc4fbdcf1 1301 Gene3D G3DSA:3.40.50.300 28 252 1.7E-77 T 15-10-2018 XDD1_2101 99c89fa8e852a50bfee8b64bc4fbdcf1 1301 Pfam PF00270 DEAD/DEAH box helicase 87 233 4.9E-7 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XDD1_2101 99c89fa8e852a50bfee8b64bc4fbdcf1 1301 Pfam PF11898 Domain of unknown function (DUF3418) 714 1297 7.8E-233 T 15-10-2018 IPR024590 RNA helicase HrpA, C-terminal XDD1_2101 99c89fa8e852a50bfee8b64bc4fbdcf1 1301 SUPERFAMILY SSF52540 74 602 6.82E-113 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2101 99c89fa8e852a50bfee8b64bc4fbdcf1 1301 Gene3D G3DSA:3.40.50.300 253 421 3.8E-57 T 15-10-2018 XDD1_2101 99c89fa8e852a50bfee8b64bc4fbdcf1 1301 SMART SM00847 464 560 3.1E-37 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 XDD1_2101 99c89fa8e852a50bfee8b64bc4fbdcf1 1301 Pfam PF00271 Helicase conserved C-terminal domain 286 403 1.1E-10 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_2101 99c89fa8e852a50bfee8b64bc4fbdcf1 1301 Gene3D G3DSA:1.20.120.1080 449 553 1.2E-18 T 15-10-2018 XDD1_2101 99c89fa8e852a50bfee8b64bc4fbdcf1 1301 SMART SM00487 75 259 1.2E-27 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XDD1_2101 99c89fa8e852a50bfee8b64bc4fbdcf1 1301 SMART SM00382 92 384 8.3E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_2101 99c89fa8e852a50bfee8b64bc4fbdcf1 1301 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 623 699 5.0E-17 T 15-10-2018 IPR011709 Domain of unknown function DUF1605 XDD1_2101 99c89fa8e852a50bfee8b64bc4fbdcf1 1301 SMART SM00490 304 404 2.3E-13 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_2101 99c89fa8e852a50bfee8b64bc4fbdcf1 1301 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 14 1297 0.0 T 15-10-2018 IPR010222 RNA helicase HrpA GO:0004004 XDD1_0902 ce554cb212f0e5e948db86e41bcad533 180 Gene3D G3DSA:1.20.1270.340 1 98 2.7E-31 T 15-10-2018 IPR038338 PriB/PriC superfamily XDD1_0902 ce554cb212f0e5e948db86e41bcad533 180 Pfam PF07445 Primosomal replication protein priC 10 177 9.1E-55 T 15-10-2018 IPR010890 Primosomal replication PriB/PriC XDD1_0517 5fc188224fd1afb82ef5e513ed56815e 152 SUPERFAMILY SSF53098 11 116 9.48E-5 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0517 5fc188224fd1afb82ef5e513ed56815e 152 Pfam PF13358 DDE superfamily endonuclease 17 115 1.3E-21 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0517 5fc188224fd1afb82ef5e513ed56815e 152 Gene3D G3DSA:3.30.420.470 3 140 4.5E-10 T 15-10-2018 XDD1_1570 d5ee109f510125456d651ccfc1f0c5a3 362 SUPERFAMILY SSF53383 1 360 1.07E-116 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_1570 d5ee109f510125456d651ccfc1f0c5a3 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 361 50.644 T 15-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 XDD1_1570 d5ee109f510125456d651ccfc1f0c5a3 362 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 208 - T 15-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site XDD1_1570 d5ee109f510125456d651ccfc1f0c5a3 362 Gene3D G3DSA:3.90.1150.10 259 362 5.0E-37 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_1570 d5ee109f510125456d651ccfc1f0c5a3 362 PIRSF PIRSF000525 1 362 1.5E-148 T 15-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 XDD1_1570 d5ee109f510125456d651ccfc1f0c5a3 362 Gene3D G3DSA:3.40.640.10 17 258 8.1E-92 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_1570 d5ee109f510125456d651ccfc1f0c5a3 362 Pfam PF00266 Aminotransferase class-V 4 350 1.1E-65 T 15-10-2018 IPR000192 Aminotransferase class V domain XDD1_1570 d5ee109f510125456d651ccfc1f0c5a3 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 360 3.8E-153 T 15-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 XDD1_2211 7b4e77f66d9323891f1a931b088e7ec3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 4.0E-22 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2211 7b4e77f66d9323891f1a931b088e7ec3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 4.0E-22 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2211 7b4e77f66d9323891f1a931b088e7ec3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 4.0E-22 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2211 7b4e77f66d9323891f1a931b088e7ec3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 4.0E-22 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2211 7b4e77f66d9323891f1a931b088e7ec3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 4.0E-22 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2211 7b4e77f66d9323891f1a931b088e7ec3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 4.0E-22 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2211 7b4e77f66d9323891f1a931b088e7ec3 254 SUPERFAMILY SSF51735 10 242 5.16E-61 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2211 7b4e77f66d9323891f1a931b088e7ec3 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XDD1_2211 7b4e77f66d9323891f1a931b088e7ec3 254 Gene3D G3DSA:3.40.50.720 1 252 1.9E-71 T 15-10-2018 XDD1_2211 7b4e77f66d9323891f1a931b088e7ec3 254 Pfam PF00106 short chain dehydrogenase 14 211 4.3E-51 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3941 ad200f52b5e74f30ace293122861b890 258 Gene3D G3DSA:1.10.10.10 11 85 6.8E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3941 ad200f52b5e74f30ace293122861b890 258 SUPERFAMILY SSF64288 72 243 8.32E-40 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily XDD1_3941 ad200f52b5e74f30ace293122861b890 258 SMART SM00866 104 240 1.4E-27 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 XDD1_3941 ad200f52b5e74f30ace293122861b890 258 SUPERFAMILY SSF46785 16 91 2.5E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3941 ad200f52b5e74f30ace293122861b890 258 Gene3D G3DSA:3.40.1410.10 89 247 9.3E-36 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily XDD1_3941 ad200f52b5e74f30ace293122861b890 258 Pfam PF07702 UTRA domain 106 240 4.4E-33 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 XDD1_3941 ad200f52b5e74f30ace293122861b890 258 SMART SM00345 25 84 3.7E-13 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_3941 ad200f52b5e74f30ace293122861b890 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 84 2.9E-14 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_3941 ad200f52b5e74f30ace293122861b890 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 1.0E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_3941 ad200f52b5e74f30ace293122861b890 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 1.0E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 325 2.0E-58 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 1 465 66.162 T 15-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 2.1E-51 T 15-10-2018 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 2.1E-51 T 15-10-2018 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 2.1E-51 T 15-10-2018 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.1E-51 T 15-10-2018 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 2.1E-51 T 15-10-2018 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 2.1E-51 T 15-10-2018 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.1E-51 T 15-10-2018 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.1E-51 T 15-10-2018 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 2.1E-51 T 15-10-2018 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 Gene3D G3DSA:3.30.390.30 344 463 2.3E-32 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 Gene3D G3DSA:3.50.50.60 6 331 2.9E-93 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 SUPERFAMILY SSF51905 1 321 2.27E-55 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 456 8.2E-30 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 Gene3D G3DSA:3.50.50.60 157 275 2.9E-93 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 PIRSF PIRSF000350 1 462 6.6E-69 T 15-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 SUPERFAMILY SSF55424 344 462 4.98E-30 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 1.9E-26 T 15-10-2018 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 1.9E-26 T 15-10-2018 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.9E-26 T 15-10-2018 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 1.9E-26 T 15-10-2018 XDD1_0260 3604b5266c1d93b572932a94b5934eef 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 1.9E-26 T 15-10-2018 XDD1_2708 3941867dbd1f512c634c9fe693fc26ab 283 Gene3D G3DSA:1.10.1040.10 187 283 1.8E-31 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 XDD1_2708 3941867dbd1f512c634c9fe693fc26ab 283 Gene3D G3DSA:3.40.50.720 2 185 8.8E-46 T 15-10-2018 XDD1_2708 3941867dbd1f512c634c9fe693fc26ab 283 SUPERFAMILY SSF48179 186 283 6.8E-32 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XDD1_2708 3941867dbd1f512c634c9fe693fc26ab 283 SUPERFAMILY SSF51735 2 186 2.06E-40 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2708 3941867dbd1f512c634c9fe693fc26ab 283 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 283 6.9E-32 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 XDD1_2708 3941867dbd1f512c634c9fe693fc26ab 283 PIRSF PIRSF000105 1 283 2.2E-73 T 15-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 XDD1_2708 3941867dbd1f512c634c9fe693fc26ab 283 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 184 8.3E-44 T 15-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 XDD1_2758 26a96cfbcc023c5682d56692265c2ba9 87 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 80 2.9E-38 T 15-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain XDD1_2758 26a96cfbcc023c5682d56692265c2ba9 87 Gene3D G3DSA:1.10.260.40 1 71 4.3E-33 T 15-10-2018 XDD1_2758 26a96cfbcc023c5682d56692265c2ba9 87 SUPERFAMILY SSF47413 2 73 3.77E-31 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_0684 37f1172552f8ee638ceb2bb4408012c0 88 Pfam PF07362 Post-segregation antitoxin CcdA 16 82 4.5E-22 T 15-10-2018 IPR009956 Post-segregation antitoxin CcdA XDD1_1900 098005df55abf6131e272a58982daada 357 SUPERFAMILY SSF141571 158 329 4.22E-30 T 15-10-2018 XDD1_1900 098005df55abf6131e272a58982daada 357 Gene3D G3DSA:2.160.20.80 171 339 2.1E-27 T 15-10-2018 XDD1_1900 098005df55abf6131e272a58982daada 357 SUPERFAMILY SSF141571 18 170 2.55E-25 T 15-10-2018 XDD1_1900 098005df55abf6131e272a58982daada 357 Pfam PF00805 Pentapeptide repeats (8 copies) 43 71 2.3E-4 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_1900 098005df55abf6131e272a58982daada 357 Gene3D G3DSA:2.160.20.100 3 159 2.4E-22 T 15-10-2018 XDD1_1900 098005df55abf6131e272a58982daada 357 Pfam PF13599 Pentapeptide repeats (9 copies) 193 259 1.6E-7 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_1900 098005df55abf6131e272a58982daada 357 Pfam PF13599 Pentapeptide repeats (9 copies) 264 329 1.4E-6 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_1900 098005df55abf6131e272a58982daada 357 Pfam PF13599 Pentapeptide repeats (9 copies) 79 139 2.8E-8 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_2410 29fae507570f00ff83ac3465d85dc838 377 Pfam PF07687 Peptidase dimerisation domain 177 284 2.5E-22 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain XDD1_2410 29fae507570f00ff83ac3465d85dc838 377 Pfam PF01546 Peptidase family M20/M25/M40 64 373 6.4E-46 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 XDD1_2410 29fae507570f00ff83ac3465d85dc838 377 Gene3D G3DSA:3.30.70.360 181 294 3.2E-128 T 15-10-2018 XDD1_2410 29fae507570f00ff83ac3465d85dc838 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 5 377 52.348 T 15-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 XDD1_2410 29fae507570f00ff83ac3465d85dc838 377 Gene3D G3DSA:3.40.630.10 10 363 3.2E-128 T 15-10-2018 XDD1_2410 29fae507570f00ff83ac3465d85dc838 377 SUPERFAMILY SSF55031 181 288 1.27E-26 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain XDD1_2410 29fae507570f00ff83ac3465d85dc838 377 SUPERFAMILY SSF53187 7 376 3.41E-65 T 15-10-2018 XDD1_2410 29fae507570f00ff83ac3465d85dc838 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 8 375 3.9E-174 T 15-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 XDD1_1669 7dd4bbc069839648114379434c6fe914 170 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 52 - T 15-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site XDD1_1669 7dd4bbc069839648114379434c6fe914 170 SUPERFAMILY SSF46689 2 65 1.9E-14 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1669 7dd4bbc069839648114379434c6fe914 170 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 3.4E-6 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_1669 7dd4bbc069839648114379434c6fe914 170 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 3.4E-6 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_1669 7dd4bbc069839648114379434c6fe914 170 Gene3D G3DSA:1.10.357.10 1 158 8.0E-19 T 15-10-2018 XDD1_1669 7dd4bbc069839648114379434c6fe914 170 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 4.3E-13 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_0348 55e0614f8022e407c7ef552cb1c0a2e7 376 SUPERFAMILY SSF53756 2 371 2.83E-141 T 15-10-2018 XDD1_0348 55e0614f8022e407c7ef552cb1c0a2e7 376 Gene3D G3DSA:3.40.50.2000 187 356 3.8E-154 T 15-10-2018 XDD1_0348 55e0614f8022e407c7ef552cb1c0a2e7 376 Gene3D G3DSA:3.40.50.2000 2 367 3.8E-154 T 15-10-2018 XDD1_0348 55e0614f8022e407c7ef552cb1c0a2e7 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 371 2.3E-171 T 15-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 XDD1_0348 55e0614f8022e407c7ef552cb1c0a2e7 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 369 1.9E-126 T 15-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 XDD1_0348 55e0614f8022e407c7ef552cb1c0a2e7 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 67.351 T 15-10-2018 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 XDD1_2254 960d6c5bf8aeccbce5f1017cd573454e 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 15-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_2254 960d6c5bf8aeccbce5f1017cd573454e 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 2.0E-47 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_2254 960d6c5bf8aeccbce5f1017cd573454e 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 2.0E-47 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_2254 960d6c5bf8aeccbce5f1017cd573454e 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.0E-47 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_2254 960d6c5bf8aeccbce5f1017cd573454e 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 2.0E-47 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_2254 960d6c5bf8aeccbce5f1017cd573454e 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 2.0E-47 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_2254 960d6c5bf8aeccbce5f1017cd573454e 331 Gene3D G3DSA:3.30.360.10 149 314 7.2E-159 T 15-10-2018 XDD1_2254 960d6c5bf8aeccbce5f1017cd573454e 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 1.9E-137 T 15-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_2254 960d6c5bf8aeccbce5f1017cd573454e 331 SUPERFAMILY SSF51735 3 166 2.53E-70 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2254 960d6c5bf8aeccbce5f1017cd573454e 331 SUPERFAMILY SSF55347 149 312 3.43E-81 T 15-10-2018 XDD1_2254 960d6c5bf8aeccbce5f1017cd573454e 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 4.1E-71 T 15-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_2254 960d6c5bf8aeccbce5f1017cd573454e 331 Gene3D G3DSA:3.40.50.720 4 326 7.2E-159 T 15-10-2018 XDD1_2254 960d6c5bf8aeccbce5f1017cd573454e 331 SMART SM00846 3 150 4.7E-99 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_2254 960d6c5bf8aeccbce5f1017cd573454e 331 PIRSF PIRSF000149 1 331 2.5E-135 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_2254 960d6c5bf8aeccbce5f1017cd573454e 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.1E-41 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_3297 e68094391ff0a12f83d258e5d9bc8d80 165 SUPERFAMILY SSF111384 22 164 1.57E-38 T 15-10-2018 XDD1_3297 e68094391ff0a12f83d258e5d9bc8d80 165 Gene3D G3DSA:3.30.910.20 21 165 1.8E-46 T 15-10-2018 IPR024930 Skp domain superfamily XDD1_3297 e68094391ff0a12f83d258e5d9bc8d80 165 PIRSF PIRSF002094 1 165 5.0E-56 T 15-10-2018 IPR005632 Chaperone protein Skp GO:0051082 XDD1_3297 e68094391ff0a12f83d258e5d9bc8d80 165 SMART SM00935 12 165 8.6E-56 T 15-10-2018 IPR005632 Chaperone protein Skp GO:0051082 XDD1_3297 e68094391ff0a12f83d258e5d9bc8d80 165 Pfam PF03938 Outer membrane protein (OmpH-like) 12 163 7.0E-36 T 15-10-2018 IPR005632 Chaperone protein Skp GO:0051082 XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 SUPERFAMILY SSF81901 184 371 6.28E-54 T 15-10-2018 XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 SMART SM00671 45 80 4.6E-11 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 SMART SM00671 333 368 3.8E-10 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 SMART SM00671 297 332 1.3E-10 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 SMART SM00671 153 188 7.6E-10 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 SMART SM00671 189 224 9.0E-11 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 SMART SM00671 261 296 3.0E-9 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 SMART SM00671 117 152 1.2E-5 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 SMART SM00671 225 260 1.3E-7 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 SMART SM00671 81 116 2.7E-10 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 Gene3D G3DSA:1.25.40.10 29 233 4.6E-69 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 SUPERFAMILY SSF81901 30 222 1.31E-57 T 15-10-2018 XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 Pfam PF08238 Sel1 repeat 154 188 6.9E-12 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 Pfam PF08238 Sel1 repeat 334 367 3.4E-9 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 Pfam PF08238 Sel1 repeat 298 332 1.4E-9 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 Pfam PF08238 Sel1 repeat 225 260 3.1E-7 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 Pfam PF08238 Sel1 repeat 117 150 3.0E-6 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 Pfam PF08238 Sel1 repeat 83 116 7.3E-8 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 Pfam PF08238 Sel1 repeat 191 224 1.4E-10 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 Pfam PF08238 Sel1 repeat 262 296 1.7E-7 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 Pfam PF08238 Sel1 repeat 47 80 8.1E-11 T 15-10-2018 IPR006597 Sel1-like repeat XDD1_3379 4ac0f17ab80c1c8ab3e431a9234aa5db 385 Gene3D G3DSA:1.25.40.10 243 385 9.9E-46 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_2752 02a6da8ce4c4088804f28636402c338a 122 Pfam PF05521 Phage head-tail joining protein 22 115 5.3E-24 T 15-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor XDD1_2752 02a6da8ce4c4088804f28636402c338a 122 Gene3D G3DSA:2.40.10.270 16 121 2.2E-37 T 15-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily XDD1_2752 02a6da8ce4c4088804f28636402c338a 122 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 21 116 1.1E-20 T 15-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 Gene3D G3DSA:1.10.287.970 1 89 9.1E-37 T 15-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 503 1.0E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 Pfam PF00072 Response regulator receiver domain 528 639 2.8E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 346 1.1E-15 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 Gene3D G3DSA:3.30.450.20 152 266 1.5E-18 T 15-10-2018 XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 SMART SM00388 282 347 1.9E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 1.7E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 1.7E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 1.7E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 1.7E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 276 1.1E-14 T 15-10-2018 IPR000014 PAS domain XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 SMART SM00387 394 507 4.8E-36 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 SMART SM00448 526 639 5.7E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 SMART SM00091 155 221 8.0E-5 T 15-10-2018 IPR000014 PAS domain XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 Pfam PF01627 Hpt domain 687 764 6.0E-13 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 Pfam PF00989 PAS fold 157 266 2.2E-17 T 15-10-2018 IPR013767 PAS fold GO:0006355 XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 SUPERFAMILY SSF47226 662 775 6.93E-30 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 SUPERFAMILY SSF47384 269 347 6.08E-17 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 SUPERFAMILY SSF55785 143 267 2.97E-20 T 15-10-2018 IPR035965 PAS domain superfamily XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 SMART SM00073 676 773 1.2E-12 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 SUPERFAMILY SSF52172 526 672 3.27E-29 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 Gene3D G3DSA:1.10.287.130 267 345 5.6E-22 T 15-10-2018 XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 PIRSF PIRSF003182 1 779 0.0 T 15-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 Gene3D G3DSA:3.30.565.10 348 507 1.4E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 Gene3D G3DSA:3.40.50.2300 508 645 2.1E-32 T 15-10-2018 XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 Gene3D G3DSA:1.20.120.160 657 779 2.1E-30 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 XDD1_3503 0fdb3919d719b107721c1f96a34b984e 779 SUPERFAMILY SSF55874 336 503 6.29E-42 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 SUPERFAMILY SSF47336 1040 1111 2.88E-19 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3099 3502 1.3E-131 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 562 966 9.7E-133 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2053 2457 2.7E-132 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 SUPERFAMILY SSF52777 1305 1534 2.0E-24 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 SUPERFAMILY SSF52777 1127 1318 5.0E-28 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 SUPERFAMILY SSF56801 3036 3596 5.23E-161 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Gene3D G3DSA:3.30.300.30 3472 3574 9.4E-33 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3225 3236 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2562 2577 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Gene3D G3DSA:3.40.50.12780 3068 3470 1.9E-131 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Gene3D G3DSA:3.40.50.12780 531 934 6.0E-134 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Gene3D G3DSA:3.40.50.12780 2022 2425 1.1E-133 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Pfam PF00550 Phosphopantetheine attachment site 2540 2602 5.1E-15 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Pfam PF00550 Phosphopantetheine attachment site 1049 1111 3.3E-12 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Pfam PF00550 Phosphopantetheine attachment site 3585 3648 1.6E-10 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 SUPERFAMILY SSF52777 2799 3065 5.89E-56 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 SUPERFAMILY SSF47336 3575 3648 1.44E-17 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Gene3D G3DSA:1.10.1200.10 1037 1116 1.1E-24 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 SUPERFAMILY SSF52777 82 259 2.45E-31 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Gene3D G3DSA:3.40.50.1820 3575 3897 6.4E-46 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2179 2190 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Pfam PF00668 Condensation domain 77 520 1.0E-75 T 15-10-2018 IPR001242 Condensation domain XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Pfam PF00668 Condensation domain 1132 1536 2.0E-55 T 15-10-2018 IPR001242 Condensation domain XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Pfam PF00668 Condensation domain 1568 2012 3.9E-79 T 15-10-2018 IPR001242 Condensation domain XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Pfam PF00668 Condensation domain 2616 3058 9.6E-95 T 15-10-2018 IPR001242 Condensation domain XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Gene3D G3DSA:3.30.300.30 2427 2528 1.1E-31 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 SUPERFAMILY SSF47336 2530 2602 1.18E-19 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 SMART SM00823 Phosphopantetheine attachment site 2538 2607 0.0035 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 SMART SM00823 Phosphopantetheine attachment site 1047 1115 1.6E-4 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 SMART SM00823 Phosphopantetheine attachment site 3583 3652 0.019 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 SUPERFAMILY SSF56801 500 1060 9.55E-162 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Gene3D G3DSA:3.30.559.30 1751 2008 1.2E-97 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Gene3D G3DSA:3.30.559.30 1292 1537 1.7E-46 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 ProSitePatterns PS00455 Putative AMP-binding domain signature. 688 699 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Gene3D G3DSA:3.30.300.30 937 1036 1.0E-30 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 SUPERFAMILY SSF53474 3654 3840 7.95E-22 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 SUPERFAMILY SSF52777 1573 1750 5.0E-29 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Gene3D G3DSA:3.30.559.10 2619 2987 9.9E-126 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 SUPERFAMILY SSF52777 2620 2791 5.78E-38 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1071 1086 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 SUPERFAMILY SSF56801 1990 2551 9.16E-165 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Pfam PF13193 AMP-binding enzyme C-terminal domain 3486 3558 4.3E-11 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Pfam PF13193 AMP-binding enzyme C-terminal domain 2441 2513 9.0E-13 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Pfam PF13193 AMP-binding enzyme C-terminal domain 950 1022 2.8E-12 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Gene3D G3DSA:3.30.559.10 1117 1291 3.0E-38 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Gene3D G3DSA:3.30.559.30 260 516 1.1E-95 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Gene3D G3DSA:1.10.1200.10 2529 2607 7.3E-27 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Gene3D G3DSA:3.30.559.30 2795 3042 9.9E-126 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 SUPERFAMILY SSF52777 1753 2019 4.56E-45 T 15-10-2018 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Pfam PF00975 Thioesterase domain 3670 3782 2.0E-14 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Gene3D G3DSA:3.30.559.10 82 451 1.1E-95 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Gene3D G3DSA:3.30.559.10 1573 1942 1.2E-97 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Pfam PF00501 AMP-binding enzyme 2032 2433 1.4E-102 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Pfam PF00501 AMP-binding enzyme 541 942 7.4E-104 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 Pfam PF00501 AMP-binding enzyme 3078 3478 1.7E-100 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_1906 21a748f4288907488c9b33f13414ca48 3907 SUPERFAMILY SSF52777 262 524 1.0E-40 T 15-10-2018 XDD1_1893 50ae64f75a69387704b96bcc2ff43430 1188 Gene3D G3DSA:3.40.50.300 134 301 3.0E-5 T 15-10-2018 XDD1_1893 50ae64f75a69387704b96bcc2ff43430 1188 Pfam PF14331 ImcF-related N-terminal domain 206 447 4.3E-75 T 15-10-2018 IPR025743 ImcF-related, N-terminal domain XDD1_1893 50ae64f75a69387704b96bcc2ff43430 1188 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 15 1184 2.0E-292 T 15-10-2018 IPR017731 Type VI secretion system, IcmF XDD1_1893 50ae64f75a69387704b96bcc2ff43430 1188 Pfam PF06761 Intracellular multiplication and human macrophage-killing 501 809 1.9E-73 T 15-10-2018 IPR009612 ImcF-related XDD1_1893 50ae64f75a69387704b96bcc2ff43430 1188 SUPERFAMILY SSF52540 136 305 6.64E-9 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1893 50ae64f75a69387704b96bcc2ff43430 1188 Pfam PF06744 Type VI secretion protein IcmF C-terminal 935 1134 4.7E-52 T 15-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal XDD1_0331 d3e2741b1221ff47b75074d0565afe99 308 SUPERFAMILY SSF56752 6 306 1.15E-103 T 15-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 XDD1_0331 d3e2741b1221ff47b75074d0565afe99 308 Pfam PF01063 Amino-transferase class IV 35 267 1.2E-49 T 15-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 XDD1_0331 d3e2741b1221ff47b75074d0565afe99 308 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 9 306 1.8E-142 T 15-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 XDD1_0331 d3e2741b1221ff47b75074d0565afe99 308 ProSitePatterns PS00770 Aminotransferases class-IV signature. 193 222 - T 15-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 XDD1_0331 d3e2741b1221ff47b75074d0565afe99 308 Gene3D G3DSA:3.30.470.10 9 126 9.0E-111 T 15-10-2018 XDD1_0331 d3e2741b1221ff47b75074d0565afe99 308 Gene3D G3DSA:3.20.10.10 137 288 9.0E-111 T 15-10-2018 XDD1_2260 c6390865fd00af85f91d92361a2a2bf0 172 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.686 T 15-10-2018 IPR022920 Disulphide bond formation protein DsbB XDD1_2260 c6390865fd00af85f91d92361a2a2bf0 172 SUPERFAMILY SSF158442 15 160 4.97E-46 T 15-10-2018 IPR023380 DsbB-like superfamily XDD1_2260 c6390865fd00af85f91d92361a2a2bf0 172 Pfam PF02600 Disulfide bond formation protein DsbB 12 158 3.8E-45 T 15-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 XDD1_2260 c6390865fd00af85f91d92361a2a2bf0 172 Gene3D G3DSA:1.20.1550.10 1 172 3.0E-65 T 15-10-2018 IPR023380 DsbB-like superfamily XDD1_2835 21bfe756864450119a37b9a208fa8238 141 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 8 141 3.5E-37 T 15-10-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly XDD1_0452 4bc57d8f069da6a16fdd2941ff3d6e27 456 Gene3D G3DSA:3.90.190.20 314 451 4.7E-30 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XDD1_0452 4bc57d8f069da6a16fdd2941ff3d6e27 456 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 59.801 T 15-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 XDD1_0452 4bc57d8f069da6a16fdd2941ff3d6e27 456 Gene3D G3DSA:3.40.1190.10 91 313 5.1E-54 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XDD1_0452 4bc57d8f069da6a16fdd2941ff3d6e27 456 SUPERFAMILY SSF51984 1 90 1.07E-23 T 15-10-2018 XDD1_0452 4bc57d8f069da6a16fdd2941ff3d6e27 456 Pfam PF08245 Mur ligase middle domain 108 291 1.8E-19 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XDD1_0452 4bc57d8f069da6a16fdd2941ff3d6e27 456 SUPERFAMILY SSF53244 312 449 2.35E-35 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XDD1_0452 4bc57d8f069da6a16fdd2941ff3d6e27 456 Pfam PF01225 Mur ligase family, catalytic domain 2 98 5.3E-19 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 XDD1_0452 4bc57d8f069da6a16fdd2941ff3d6e27 456 SUPERFAMILY SSF53623 95 308 1.13E-47 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XDD1_0452 4bc57d8f069da6a16fdd2941ff3d6e27 456 Gene3D G3DSA:3.40.50.720 1 90 1.1E-36 T 15-10-2018 XDD1_0452 4bc57d8f069da6a16fdd2941ff3d6e27 456 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 5.4E-258 T 15-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 XDD1_0452 4bc57d8f069da6a16fdd2941ff3d6e27 456 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 360 1.8E-7 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 XDD1_2246 d457d33e3a2505adc3f465b9ea8c784c 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 259 1.2E-20 T 15-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase XDD1_2246 d457d33e3a2505adc3f465b9ea8c784c 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 15-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 XDD1_2246 d457d33e3a2505adc3f465b9ea8c784c 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 15-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 XDD1_2246 d457d33e3a2505adc3f465b9ea8c784c 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 1.5E-104 T 15-10-2018 XDD1_2246 d457d33e3a2505adc3f465b9ea8c784c 268 Gene3D G3DSA:3.60.10.10 1 267 2.4E-80 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XDD1_2246 d457d33e3a2505adc3f465b9ea8c784c 268 SUPERFAMILY SSF56219 1 268 1.83E-85 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XDD1_2246 d457d33e3a2505adc3f465b9ea8c784c 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 3.8E-90 T 15-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 XDD1_0789 2f0f2abef04eb6052f9ce1180746a813 555 Pfam PF12848 ABC transporter 230 306 2.2E-12 T 15-10-2018 IPR032781 ABC-transporter extension domain XDD1_0789 2f0f2abef04eb6052f9ce1180746a813 555 SMART SM00382 348 522 1.7E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0789 2f0f2abef04eb6052f9ce1180746a813 555 SMART SM00382 31 236 2.5E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0789 2f0f2abef04eb6052f9ce1180746a813 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 9.7E-296 T 15-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 XDD1_0789 2f0f2abef04eb6052f9ce1180746a813 555 Pfam PF00005 ABC transporter 22 191 2.7E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_0789 2f0f2abef04eb6052f9ce1180746a813 555 SUPERFAMILY SSF52540 302 533 8.74E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0789 2f0f2abef04eb6052f9ce1180746a813 555 Pfam PF00005 ABC transporter 340 473 1.6E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_0789 2f0f2abef04eb6052f9ce1180746a813 555 Gene3D G3DSA:3.40.50.300 2 285 3.8E-89 T 15-10-2018 XDD1_0789 2f0f2abef04eb6052f9ce1180746a813 555 SUPERFAMILY SSF52540 12 243 3.34E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0789 2f0f2abef04eb6052f9ce1180746a813 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_0789 2f0f2abef04eb6052f9ce1180746a813 555 Gene3D G3DSA:3.40.50.300 286 555 2.7E-77 T 15-10-2018 XDD1_3889 8dce0cac5a30da6322ac17bc21922812 92 SUPERFAMILY SSF47598 5 82 8.89E-21 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XDD1_3889 8dce0cac5a30da6322ac17bc21922812 92 Gene3D G3DSA:1.20.5.780 1 86 3.2E-16 T 15-10-2018 XDD1_3889 8dce0cac5a30da6322ac17bc21922812 92 Pfam PF08681 Protein of unknown function (DUF1778) 9 83 5.9E-25 T 15-10-2018 IPR014795 Vibrio phage ICP1, Orf50 XDD1_0790 9779f8c4b3d3d4dfe9dd9f56f7ed7dd0 242 Pfam PF00005 ABC transporter 29 177 1.5E-17 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_0790 9779f8c4b3d3d4dfe9dd9f56f7ed7dd0 242 SUPERFAMILY SSF52540 18 230 8.91E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0790 9779f8c4b3d3d4dfe9dd9f56f7ed7dd0 242 Gene3D G3DSA:3.40.50.300 8 235 2.8E-42 T 15-10-2018 XDD1_3671 963af8f1e4aeb095c8a958042ebec384 245 SUPERFAMILY SSF52540 56 234 3.08E-34 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3671 963af8f1e4aeb095c8a958042ebec384 245 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 50 233 2.7E-75 T 15-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 XDD1_3671 963af8f1e4aeb095c8a958042ebec384 245 Gene3D G3DSA:3.40.50.300 41 242 2.7E-59 T 15-10-2018 XDD1_3671 963af8f1e4aeb095c8a958042ebec384 245 Pfam PF01926 50S ribosome-binding GTPase 68 186 3.4E-20 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_3671 963af8f1e4aeb095c8a958042ebec384 245 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 54 237 27.828 T 15-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 XDD1_3668 39f07add623b03b67adc3c2b01d76548 422 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 31 414 7.9E-154 T 15-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 XDD1_3668 39f07add623b03b67adc3c2b01d76548 422 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_3668 39f07add623b03b67adc3c2b01d76548 422 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 23 416 6.8E-206 T 15-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 XDD1_3668 39f07add623b03b67adc3c2b01d76548 422 SUPERFAMILY SSF53383 30 411 5.17E-124 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_3668 39f07add623b03b67adc3c2b01d76548 422 Pfam PF00202 Aminotransferase class-III 40 414 1.6E-131 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_3668 39f07add623b03b67adc3c2b01d76548 422 Gene3D G3DSA:3.90.1150.10 44 407 6.3E-152 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_3668 39f07add623b03b67adc3c2b01d76548 422 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 30 417 69.51 T 15-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 XDD1_3668 39f07add623b03b67adc3c2b01d76548 422 Gene3D G3DSA:3.40.640.10 74 319 6.3E-152 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_3668 39f07add623b03b67adc3c2b01d76548 422 PIRSF PIRSF000521 186 416 2.3E-34 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_3668 39f07add623b03b67adc3c2b01d76548 422 PIRSF PIRSF000521 42 172 1.1E-8 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_2526 2700a38f6db1831813cfb7ba451e548c 312 Pfam PF00294 pfkB family carbohydrate kinase 14 294 1.5E-58 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB XDD1_2526 2700a38f6db1831813cfb7ba451e548c 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 XDD1_2526 2700a38f6db1831813cfb7ba451e548c 312 Gene3D G3DSA:3.40.1190.20 2 311 5.9E-88 T 15-10-2018 IPR029056 Ribokinase-like XDD1_2526 2700a38f6db1831813cfb7ba451e548c 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 307 2.4E-97 T 15-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 XDD1_2526 2700a38f6db1831813cfb7ba451e548c 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 XDD1_2526 2700a38f6db1831813cfb7ba451e548c 312 PIRSF PIRSF000535 2 311 3.5E-110 T 15-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 XDD1_2526 2700a38f6db1831813cfb7ba451e548c 312 SUPERFAMILY SSF53613 7 291 4.21E-63 T 15-10-2018 IPR029056 Ribokinase-like XDD1_2526 2700a38f6db1831813cfb7ba451e548c 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 307 5.8E-98 T 15-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 XDD1_0391 57398bc3745d7a6fbabe4925eb08a700 482 Pfam PF00155 Aminotransferase class I and II 143 436 1.2E-20 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XDD1_0391 57398bc3745d7a6fbabe4925eb08a700 482 Gene3D G3DSA:3.40.640.10 111 464 1.1E-104 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_0391 57398bc3745d7a6fbabe4925eb08a700 482 SUPERFAMILY SSF46785 14 86 3.37E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_0391 57398bc3745d7a6fbabe4925eb08a700 482 SMART SM00345 24 83 3.5E-17 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_0391 57398bc3745d7a6fbabe4925eb08a700 482 Gene3D G3DSA:1.10.10.10 8 84 1.2E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0391 57398bc3745d7a6fbabe4925eb08a700 482 SUPERFAMILY SSF53383 79 473 1.13E-78 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_0391 57398bc3745d7a6fbabe4925eb08a700 482 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 1.8E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_0391 57398bc3745d7a6fbabe4925eb08a700 482 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 1.8E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_0391 57398bc3745d7a6fbabe4925eb08a700 482 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 83 1.6E-18 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_2319 03ed4fadda37829d5bf8f43642eff284 135 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 54 124 7.5E-27 T 15-10-2018 IPR001543 Surface presentation of antigen (SpoA) XDD1_2319 03ed4fadda37829d5bf8f43642eff284 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 87 100 8.5E-30 T 15-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 XDD1_2319 03ed4fadda37829d5bf8f43642eff284 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 100 115 8.5E-30 T 15-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 XDD1_2319 03ed4fadda37829d5bf8f43642eff284 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 71 87 8.5E-30 T 15-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 XDD1_2319 03ed4fadda37829d5bf8f43642eff284 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 54 70 8.5E-30 T 15-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 XDD1_2319 03ed4fadda37829d5bf8f43642eff284 135 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 46 1.1E-14 T 15-10-2018 IPR031576 Flagellar motor switch protein FliN, N-terminal XDD1_2319 03ed4fadda37829d5bf8f43642eff284 135 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 51 126 2.5E-33 T 15-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 XDD1_2319 03ed4fadda37829d5bf8f43642eff284 135 Gene3D G3DSA:2.30.330.10 41 135 4.5E-35 T 15-10-2018 IPR036429 SpoA-like superfamily XDD1_2319 03ed4fadda37829d5bf8f43642eff284 135 SUPERFAMILY SSF101801 52 133 2.62E-27 T 15-10-2018 IPR036429 SpoA-like superfamily XDD1_1272 d46b6b95a2dffe73436d91aa987ff96c 156 PIRSF PIRSF004505 1 155 5.9E-40 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 XDD1_1272 d46b6b95a2dffe73436d91aa987ff96c 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 9.5E-47 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 XDD1_1272 d46b6b95a2dffe73436d91aa987ff96c 156 Gene3D G3DSA:3.40.1280.10 1 156 7.4E-52 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XDD1_1272 d46b6b95a2dffe73436d91aa987ff96c 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 2.0E-81 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 XDD1_1272 d46b6b95a2dffe73436d91aa987ff96c 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.572 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 XDD1_1272 d46b6b95a2dffe73436d91aa987ff96c 156 SUPERFAMILY SSF75217 1 154 8.37E-49 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases XDD1_2177 601452d8860332a3884b3cddb77c2dcf 397 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 88 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 XDD1_2177 601452d8860332a3884b3cddb77c2dcf 397 Gene3D G3DSA:1.20.1250.20 15 390 5.5E-49 T 15-10-2018 XDD1_2177 601452d8860332a3884b3cddb77c2dcf 397 SUPERFAMILY SSF103473 15 392 1.16E-59 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_2177 601452d8860332a3884b3cddb77c2dcf 397 Pfam PF07690 Major Facilitator Superfamily 23 326 2.0E-34 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_1930 aee66a361e649d9580e680b8f72762da 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 15-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 XDD1_1930 aee66a361e649d9580e680b8f72762da 382 SUPERFAMILY SSF51604 95 356 3.28E-71 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily XDD1_1930 aee66a361e649d9580e680b8f72762da 382 Hamap MF_01289 D-galactonate dehydratase [dgoD]. 1 382 74.089 T 15-10-2018 IPR023592 D-galactonate dehydratase GO:0008869|GO:0034194 KEGG: 00052+4.2.1.6 XDD1_1930 aee66a361e649d9580e680b8f72762da 382 Gene3D G3DSA:3.20.20.120 102 344 1.4E-144 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily XDD1_1930 aee66a361e649d9580e680b8f72762da 382 Gene3D G3DSA:3.30.390.10 11 374 1.4E-144 T 15-10-2018 IPR029017 Enolase-like, N-terminal XDD1_1930 aee66a361e649d9580e680b8f72762da 382 SMART SM00922 125 230 7.4E-17 T 15-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal XDD1_1930 aee66a361e649d9580e680b8f72762da 382 Pfam PF13378 Enolase C-terminal domain-like 135 355 9.6E-54 T 15-10-2018 IPR029065 Enolase C-terminal domain-like XDD1_1930 aee66a361e649d9580e680b8f72762da 382 SUPERFAMILY SSF54826 1 112 2.31E-31 T 15-10-2018 XDD1_1930 aee66a361e649d9580e680b8f72762da 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 1.3E-28 T 15-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain XDD1_1930 aee66a361e649d9580e680b8f72762da 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 15-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 XDD1_2990 8d3239f3b52721ce843439169c6d2311 123 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 28.198 T 15-10-2018 IPR008249 Uncharacterised protein family UPF0231 XDD1_2990 8d3239f3b52721ce843439169c6d2311 123 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 2.0E-49 T 15-10-2018 IPR008249 Uncharacterised protein family UPF0231 XDD1_2990 8d3239f3b52721ce843439169c6d2311 123 PIRSF PIRSF006287 1 120 8.8E-47 T 15-10-2018 IPR008249 Uncharacterised protein family UPF0231 XDD1_2990 8d3239f3b52721ce843439169c6d2311 123 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 1.5E-42 T 15-10-2018 IPR008249 Uncharacterised protein family UPF0231 XDD1_3872 5bf66a50cf7db395b153fe37dffaf38b 104 Pfam PF01527 Transposase 6 78 5.0E-17 T 15-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 XDD1_3872 5bf66a50cf7db395b153fe37dffaf38b 104 Gene3D G3DSA:1.10.10.60 11 95 9.0E-11 T 15-10-2018 XDD1_3872 5bf66a50cf7db395b153fe37dffaf38b 104 SUPERFAMILY SSF46689 6 95 1.97E-19 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0496 4b9d77e8d8e05cc6132083d536ad78ab 83 Gene3D G3DSA:3.30.1660.10 21 83 6.6E-20 T 15-10-2018 IPR025543 Dodecin-like XDD1_0496 4b9d77e8d8e05cc6132083d536ad78ab 83 Pfam PF07338 Protein of unknown function (DUF1471) 32 83 1.4E-18 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 XDD1_0496 4b9d77e8d8e05cc6132083d536ad78ab 83 SUPERFAMILY SSF159871 3 83 1.11E-22 T 15-10-2018 IPR036275 YdgH-like superfamily XDD1_2151 8b77487454598857568be86a6655afb4 672 Gene3D G3DSA:2.40.170.20 181 672 5.0E-60 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XDD1_2151 8b77487454598857568be86a6655afb4 672 Pfam PF00593 TonB dependent receptor 222 671 1.9E-41 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XDD1_2151 8b77487454598857568be86a6655afb4 672 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 71 672 9.3E-242 T 15-10-2018 IPR010100 TonB-dependent copper receptor XDD1_2151 8b77487454598857568be86a6655afb4 672 Pfam PF07715 TonB-dependent Receptor Plug Domain 81 168 1.7E-10 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain XDD1_2151 8b77487454598857568be86a6655afb4 672 SUPERFAMILY SSF56935 80 672 4.4E-87 T 15-10-2018 XDD1_2151 8b77487454598857568be86a6655afb4 672 Gene3D G3DSA:2.170.130.10 60 175 8.3E-10 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XDD1_3892 545bda3c49a2d62bc749e3bba6f0ea1e 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 4.0E-26 T 15-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 XDD1_3892 545bda3c49a2d62bc749e3bba6f0ea1e 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 3.7E-13 T 15-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 XDD1_3892 545bda3c49a2d62bc749e3bba6f0ea1e 191 Pfam PF01106 NifU-like domain 111 177 2.8E-20 T 15-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 XDD1_3892 545bda3c49a2d62bc749e3bba6f0ea1e 191 SUPERFAMILY SSF117916 95 184 2.11E-25 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily XDD1_3892 545bda3c49a2d62bc749e3bba6f0ea1e 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 2.2E-100 T 15-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 XDD1_3892 545bda3c49a2d62bc749e3bba6f0ea1e 191 SUPERFAMILY SSF89360 1 97 7.85E-21 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XDD1_3892 545bda3c49a2d62bc749e3bba6f0ea1e 191 Gene3D G3DSA:3.30.300.130 101 188 8.6E-21 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily XDD1_3892 545bda3c49a2d62bc749e3bba6f0ea1e 191 Gene3D G3DSA:2.60.300.12 1 98 1.9E-12 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XDD1_3892 545bda3c49a2d62bc749e3bba6f0ea1e 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 46.027 T 15-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 XDD1_2179 e08cb73d8db1e31c1705333fb09042b9 308 Gene3D G3DSA:3.30.54.10 174 305 5.2E-100 T 15-10-2018 XDD1_2179 e08cb73d8db1e31c1705333fb09042b9 308 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 307 8.2E-139 T 15-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 XDD1_2179 e08cb73d8db1e31c1705333fb09042b9 308 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 10 305 1.8E-129 T 15-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 XDD1_2179 e08cb73d8db1e31c1705333fb09042b9 308 SUPERFAMILY SSF56596 7 306 5.89E-104 T 15-10-2018 IPR036384 Replication terminator Tus superfamily GO:0003677|GO:0005737|GO:0006274 XDD1_2179 e08cb73d8db1e31c1705333fb09042b9 308 Gene3D G3DSA:3.50.14.10 13 280 5.2E-100 T 15-10-2018 IPR036381 Replication terminator Tus, domain 1 GO:0003677|GO:0005737|GO:0006274 XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 843 1029 3.2E-11 T 15-10-2018 XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 Gene3D G3DSA:3.40.47.10 11 591 2.6E-165 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 SUPERFAMILY SSF52777 1215 1378 6.89E-25 T 15-10-2018 XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 SUPERFAMILY SSF51735 838 1027 1.86E-23 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 Gene3D G3DSA:3.30.70.3050 489 570 2.6E-165 T 15-10-2018 XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 Gene3D G3DSA:3.30.559.30 1382 1639 5.8E-74 T 15-10-2018 XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 Pfam PF08659 KR domain 844 1026 3.2E-28 T 15-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 Pfam PF00550 Phosphopantetheine attachment site 1126 1187 3.4E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 Gene3D G3DSA:3.40.50.720 729 1060 6.4E-41 T 15-10-2018 XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 267 385 2.3E-40 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 388 500 7.5E-13 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 SMART SM00825 Beta-ketoacyl synthase 11 439 1.3E-155 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 SUPERFAMILY SSF52777 1386 1641 3.78E-37 T 15-10-2018 XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 10 256 1.2E-64 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 171 187 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 Gene3D G3DSA:3.30.559.10 1212 1584 5.8E-74 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 Pfam PF00668 Condensation domain 1215 1643 1.8E-52 T 15-10-2018 IPR001242 Condensation domain XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 SUPERFAMILY SSF47336 1117 1186 9.68E-14 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 SUPERFAMILY SSF53901 6 434 6.95E-76 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2711 238461483412fc1e92dcec3733fe69dc 1670 Gene3D G3DSA:1.10.1200.10 1113 1195 3.1E-18 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_3862 112adf5a26253c4fc4a3a20346b9ef64 337 SUPERFAMILY SSF55874 185 334 4.58E-30 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_3862 112adf5a26253c4fc4a3a20346b9ef64 337 SUPERFAMILY SSF47384 110 184 5.1E-12 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XDD1_3862 112adf5a26253c4fc4a3a20346b9ef64 337 SMART SM00387 227 335 1.3E-20 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_3862 112adf5a26253c4fc4a3a20346b9ef64 337 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 232 334 1.2E-16 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_3862 112adf5a26253c4fc4a3a20346b9ef64 337 Pfam PF00512 His Kinase A (phospho-acceptor) domain 130 184 3.7E-10 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_3862 112adf5a26253c4fc4a3a20346b9ef64 337 SMART SM00388 126 186 2.6E-10 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_3862 112adf5a26253c4fc4a3a20346b9ef64 337 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 332 1.2E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_3862 112adf5a26253c4fc4a3a20346b9ef64 337 PRINTS PR00344 Bacterial sensor protein C-terminal signature 262 276 1.2E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_3862 112adf5a26253c4fc4a3a20346b9ef64 337 PRINTS PR00344 Bacterial sensor protein C-terminal signature 295 313 1.2E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_3862 112adf5a26253c4fc4a3a20346b9ef64 337 PRINTS PR00344 Bacterial sensor protein C-terminal signature 280 290 1.2E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_3862 112adf5a26253c4fc4a3a20346b9ef64 337 Gene3D G3DSA:1.10.287.130 75 182 5.2E-18 T 15-10-2018 XDD1_3862 112adf5a26253c4fc4a3a20346b9ef64 337 Gene3D G3DSA:3.30.565.10 187 337 6.6E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_3898 77bae97871a368abd82a395dadff04df 186 Pfam PF00583 Acetyltransferase (GNAT) family 61 159 9.9E-9 T 15-10-2018 IPR000182 GNAT domain XDD1_3898 77bae97871a368abd82a395dadff04df 186 SUPERFAMILY SSF55729 1 184 3.14E-22 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_3898 77bae97871a368abd82a395dadff04df 186 Gene3D G3DSA:3.40.630.30 1 185 9.4E-26 T 15-10-2018 XDD1_2395 8ddbac5141577deb70e25a1a4ffe8c79 455 Pfam PF02601 Exonuclease VII, large subunit 126 440 2.1E-101 T 15-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 XDD1_2395 8ddbac5141577deb70e25a1a4ffe8c79 455 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 2.1E-30 T 15-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 XDD1_2395 8ddbac5141577deb70e25a1a4ffe8c79 455 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 354 2.3E-134 T 15-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 XDD1_2395 8ddbac5141577deb70e25a1a4ffe8c79 455 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 29.72 T 15-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 XDD1_2603 460683ef1d9f41e2a2d813ab7c5e618b 400 Pfam PF00871 Acetokinase family 6 393 4.1E-175 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 XDD1_2603 460683ef1d9f41e2a2d813ab7c5e618b 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 15-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 XDD1_2603 460683ef1d9f41e2a2d813ab7c5e618b 400 PRINTS PR00471 Acetate kinase family signature 380 392 2.7E-47 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 XDD1_2603 460683ef1d9f41e2a2d813ab7c5e618b 400 PRINTS PR00471 Acetate kinase family signature 6 17 2.7E-47 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 XDD1_2603 460683ef1d9f41e2a2d813ab7c5e618b 400 PRINTS PR00471 Acetate kinase family signature 325 341 2.7E-47 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 XDD1_2603 460683ef1d9f41e2a2d813ab7c5e618b 400 PRINTS PR00471 Acetate kinase family signature 206 227 2.7E-47 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 XDD1_2603 460683ef1d9f41e2a2d813ab7c5e618b 400 PRINTS PR00471 Acetate kinase family signature 302 315 2.7E-47 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 XDD1_2603 460683ef1d9f41e2a2d813ab7c5e618b 400 PRINTS PR00471 Acetate kinase family signature 176 189 2.7E-47 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 XDD1_2603 460683ef1d9f41e2a2d813ab7c5e618b 400 SUPERFAMILY SSF53067 159 398 8.75E-85 T 15-10-2018 XDD1_2603 460683ef1d9f41e2a2d813ab7c5e618b 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 186.928 T 15-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 XDD1_2603 460683ef1d9f41e2a2d813ab7c5e618b 400 Gene3D G3DSA:3.30.420.40 3 198 6.8E-78 T 15-10-2018 XDD1_2603 460683ef1d9f41e2a2d813ab7c5e618b 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 15-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 XDD1_2603 460683ef1d9f41e2a2d813ab7c5e618b 400 SUPERFAMILY SSF53067 4 199 5.31E-64 T 15-10-2018 XDD1_2603 460683ef1d9f41e2a2d813ab7c5e618b 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 2.2E-180 T 15-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 XDD1_2603 460683ef1d9f41e2a2d813ab7c5e618b 400 PIRSF PIRSF000722 2 400 1.3E-143 T 15-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 XDD1_2603 460683ef1d9f41e2a2d813ab7c5e618b 400 Gene3D G3DSA:3.30.420.40 199 400 1.8E-85 T 15-10-2018 XDD1_0242 4ce9caa7980b1a4f0ab18d60f40108a1 172 Pfam PF13358 DDE superfamily endonuclease 9 143 8.7E-34 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0242 4ce9caa7980b1a4f0ab18d60f40108a1 172 Gene3D G3DSA:3.30.420.470 7 161 8.1E-12 T 15-10-2018 XDD1_1495 a5ed2702f4ae9142cc6888a394b674ed 898 SMART SM00493 250 323 0.0062 T 15-10-2018 IPR006171 TOPRIM domain XDD1_1495 a5ed2702f4ae9142cc6888a394b674ed 898 SUPERFAMILY SSF57783 1 99 3.91E-28 T 15-10-2018 XDD1_1495 a5ed2702f4ae9142cc6888a394b674ed 898 SMART SM00400 36 90 6.4E-20 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XDD1_1495 a5ed2702f4ae9142cc6888a394b674ed 898 Gene3D G3DSA:3.40.1360.10 239 356 9.7E-18 T 15-10-2018 XDD1_1495 a5ed2702f4ae9142cc6888a394b674ed 898 Gene3D G3DSA:3.90.980.10 114 232 1.1E-8 T 15-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily XDD1_1495 a5ed2702f4ae9142cc6888a394b674ed 898 Pfam PF13155 Toprim-like 253 340 5.5E-15 T 15-10-2018 XDD1_1495 a5ed2702f4ae9142cc6888a394b674ed 898 Gene3D G3DSA:3.90.580.10 1 100 2.9E-28 T 15-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 XDD1_1495 a5ed2702f4ae9142cc6888a394b674ed 898 Pfam PF01807 CHC2 zinc finger 6 96 3.1E-24 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XDD1_1495 a5ed2702f4ae9142cc6888a394b674ed 898 SUPERFAMILY SSF56731 118 363 1.2E-31 T 15-10-2018 XDD1_2003 dcb79e5c8384b8e1c3f8f827c9c12fb7 420 Gene3D G3DSA:3.30.460.30 1 158 1.3E-55 T 15-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XDD1_2003 dcb79e5c8384b8e1c3f8f827c9c12fb7 420 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.783 T 15-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XDD1_2003 dcb79e5c8384b8e1c3f8f827c9c12fb7 420 SUPERFAMILY SSF51735 162 315 1.48E-35 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2003 dcb79e5c8384b8e1c3f8f827c9c12fb7 420 PIRSF PIRSF000445 1 420 6.4E-155 T 15-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XDD1_2003 dcb79e5c8384b8e1c3f8f827c9c12fb7 420 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 417 5.7E-156 T 15-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XDD1_2003 dcb79e5c8384b8e1c3f8f827c9c12fb7 420 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 15-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XDD1_2003 dcb79e5c8384b8e1c3f8f827c9c12fb7 420 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 1.4E-48 T 15-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase XDD1_2003 dcb79e5c8384b8e1c3f8f827c9c12fb7 420 SUPERFAMILY SSF69742 1 158 4.71E-47 T 15-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XDD1_2003 dcb79e5c8384b8e1c3f8f827c9c12fb7 420 Gene3D G3DSA:3.40.50.720 161 313 3.7E-45 T 15-10-2018 XDD1_2003 dcb79e5c8384b8e1c3f8f827c9c12fb7 420 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 321 416 2.6E-24 T 15-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XDD1_2003 dcb79e5c8384b8e1c3f8f827c9c12fb7 420 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 3.3E-47 T 15-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XDD1_2003 dcb79e5c8384b8e1c3f8f827c9c12fb7 420 SUPERFAMILY SSF69075 318 418 3.4E-26 T 15-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XDD1_1928 12cbe85c67d6cb9d898822df1382b5dc 297 Gene3D G3DSA:3.30.420.300 1 85 1.4E-27 T 15-10-2018 XDD1_1928 12cbe85c67d6cb9d898822df1382b5dc 297 Gene3D G3DSA:3.30.420.310 90 297 2.0E-67 T 15-10-2018 XDD1_1928 12cbe85c67d6cb9d898822df1382b5dc 297 Pfam PF05035 2-keto-3-deoxy-galactonokinase 9 291 1.1E-90 T 15-10-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 XDD1_0415 0e5fade6ed04a6bcfd584165b32e6a5f 477 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 276 474 2.1E-58 T 15-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal XDD1_0415 0e5fade6ed04a6bcfd584165b32e6a5f 477 Gene3D G3DSA:1.20.140.10 272 477 7.3E-63 T 15-10-2018 XDD1_0415 0e5fade6ed04a6bcfd584165b32e6a5f 477 SUPERFAMILY SSF47203 260 474 8.79E-49 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 XDD1_0415 0e5fade6ed04a6bcfd584165b32e6a5f 477 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 4 269 7.3E-84 T 15-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal XDD1_0415 0e5fade6ed04a6bcfd584165b32e6a5f 477 Gene3D G3DSA:1.10.3140.10 1 140 9.3E-37 T 15-10-2018 XDD1_0415 0e5fade6ed04a6bcfd584165b32e6a5f 477 Gene3D G3DSA:2.40.110.10 141 270 1.5E-40 T 15-10-2018 XDD1_0415 0e5fade6ed04a6bcfd584165b32e6a5f 477 SUPERFAMILY SSF56645 1 269 1.96E-65 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 XDD1_0415 0e5fade6ed04a6bcfd584165b32e6a5f 477 PIRSF PIRSF000331 1 477 6.5E-128 T 15-10-2018 IPR004925 HpaB/PvcC/4-BUDH XDD1_2198 97101442ad28c8e47a5c302c95cec09a 246 SMART SM00934 16 237 8.2E-97 T 15-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XDD1_2198 97101442ad28c8e47a5c302c95cec09a 246 Gene3D G3DSA:3.20.20.70 3 242 4.6E-85 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_2198 97101442ad28c8e47a5c302c95cec09a 246 SUPERFAMILY SSF51366 13 240 4.71E-78 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XDD1_2198 97101442ad28c8e47a5c302c95cec09a 246 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 15-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XDD1_2198 97101442ad28c8e47a5c302c95cec09a 246 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 15 234 9.2E-49 T 15-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XDD1_2198 97101442ad28c8e47a5c302c95cec09a 246 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 17 237 3.2E-55 T 15-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XDD1_2198 97101442ad28c8e47a5c302c95cec09a 246 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 242 39.236 T 15-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XDD1_2546 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13358 DDE superfamily endonuclease 169 313 2.9E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2546 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13592 Winged helix-turn helix 100 155 3.4E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_2546 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13551 Winged helix-turn helix 32 88 1.8E-8 T 15-10-2018 XDD1_2546 39485c12b4e90e040f9a640ed0d558f3 349 SUPERFAMILY SSF53098 222 322 1.08E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_2546 39485c12b4e90e040f9a640ed0d558f3 349 SUPERFAMILY SSF46689 17 131 3.05E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2546 39485c12b4e90e040f9a640ed0d558f3 349 Gene3D G3DSA:3.30.420.470 133 342 7.6E-12 T 15-10-2018 XDD1_0616 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13358 DDE superfamily endonuclease 169 313 2.9E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0616 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13592 Winged helix-turn helix 100 155 3.4E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_0616 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13551 Winged helix-turn helix 32 88 1.8E-8 T 15-10-2018 XDD1_0616 39485c12b4e90e040f9a640ed0d558f3 349 SUPERFAMILY SSF53098 222 322 1.08E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0616 39485c12b4e90e040f9a640ed0d558f3 349 SUPERFAMILY SSF46689 17 131 3.05E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0616 39485c12b4e90e040f9a640ed0d558f3 349 Gene3D G3DSA:3.30.420.470 133 342 7.6E-12 T 15-10-2018 XDD1_2175 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13358 DDE superfamily endonuclease 169 313 2.9E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2175 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13592 Winged helix-turn helix 100 155 3.4E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_2175 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13551 Winged helix-turn helix 32 88 1.8E-8 T 15-10-2018 XDD1_2175 39485c12b4e90e040f9a640ed0d558f3 349 SUPERFAMILY SSF53098 222 322 1.08E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_2175 39485c12b4e90e040f9a640ed0d558f3 349 SUPERFAMILY SSF46689 17 131 3.05E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2175 39485c12b4e90e040f9a640ed0d558f3 349 Gene3D G3DSA:3.30.420.470 133 342 7.6E-12 T 15-10-2018 XDD1_2343 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13358 DDE superfamily endonuclease 169 313 2.9E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2343 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13592 Winged helix-turn helix 100 155 3.4E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_2343 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13551 Winged helix-turn helix 32 88 1.8E-8 T 15-10-2018 XDD1_2343 39485c12b4e90e040f9a640ed0d558f3 349 SUPERFAMILY SSF53098 222 322 1.08E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_2343 39485c12b4e90e040f9a640ed0d558f3 349 SUPERFAMILY SSF46689 17 131 3.05E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2343 39485c12b4e90e040f9a640ed0d558f3 349 Gene3D G3DSA:3.30.420.470 133 342 7.6E-12 T 15-10-2018 XDD1_2479 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13358 DDE superfamily endonuclease 169 313 2.9E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2479 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13592 Winged helix-turn helix 100 155 3.4E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_2479 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13551 Winged helix-turn helix 32 88 1.8E-8 T 15-10-2018 XDD1_2479 39485c12b4e90e040f9a640ed0d558f3 349 SUPERFAMILY SSF53098 222 322 1.08E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_2479 39485c12b4e90e040f9a640ed0d558f3 349 SUPERFAMILY SSF46689 17 131 3.05E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2479 39485c12b4e90e040f9a640ed0d558f3 349 Gene3D G3DSA:3.30.420.470 133 342 7.6E-12 T 15-10-2018 XDD1_0535 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13358 DDE superfamily endonuclease 169 313 2.9E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0535 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13592 Winged helix-turn helix 100 155 3.4E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_0535 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13551 Winged helix-turn helix 32 88 1.8E-8 T 15-10-2018 XDD1_0535 39485c12b4e90e040f9a640ed0d558f3 349 SUPERFAMILY SSF53098 222 322 1.08E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0535 39485c12b4e90e040f9a640ed0d558f3 349 SUPERFAMILY SSF46689 17 131 3.05E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0535 39485c12b4e90e040f9a640ed0d558f3 349 Gene3D G3DSA:3.30.420.470 133 342 7.6E-12 T 15-10-2018 XDD1_3076 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13358 DDE superfamily endonuclease 169 313 2.9E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_3076 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13592 Winged helix-turn helix 100 155 3.4E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_3076 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13551 Winged helix-turn helix 32 88 1.8E-8 T 15-10-2018 XDD1_3076 39485c12b4e90e040f9a640ed0d558f3 349 SUPERFAMILY SSF53098 222 322 1.08E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3076 39485c12b4e90e040f9a640ed0d558f3 349 SUPERFAMILY SSF46689 17 131 3.05E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3076 39485c12b4e90e040f9a640ed0d558f3 349 Gene3D G3DSA:3.30.420.470 133 342 7.6E-12 T 15-10-2018 XDD1_0221 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13358 DDE superfamily endonuclease 169 313 2.9E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0221 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13592 Winged helix-turn helix 100 155 3.4E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_0221 39485c12b4e90e040f9a640ed0d558f3 349 Pfam PF13551 Winged helix-turn helix 32 88 1.8E-8 T 15-10-2018 XDD1_0221 39485c12b4e90e040f9a640ed0d558f3 349 SUPERFAMILY SSF53098 222 322 1.08E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0221 39485c12b4e90e040f9a640ed0d558f3 349 SUPERFAMILY SSF46689 17 131 3.05E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0221 39485c12b4e90e040f9a640ed0d558f3 349 Gene3D G3DSA:3.30.420.470 133 342 7.6E-12 T 15-10-2018 XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 SUPERFAMILY SSF47794 363 422 2.83E-16 T 15-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 Gene3D G3DSA:3.30.300.20 278 353 5.8E-20 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 Pfam PF13184 NusA-like KH domain 230 297 8.3E-28 T 15-10-2018 IPR025249 KH domain, NusA-like GO:0003723 XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 Gene3D G3DSA:1.10.150.20 438 497 4.3E-25 T 15-10-2018 XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 Gene3D G3DSA:3.30.1480.10 1 129 5.7E-45 T 15-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 SUPERFAMILY SSF54814 201 278 2.42E-29 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 Gene3D G3DSA:3.30.300.20 199 277 2.9E-31 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 348 5.6E-123 T 15-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 Pfam PF14520 Helix-hairpin-helix domain 439 493 1.1E-8 T 15-10-2018 XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 Pfam PF14520 Helix-hairpin-helix domain 377 418 0.0037 T 15-10-2018 XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 372 421 3.3E-21 T 15-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 447 496 2.4E-18 T 15-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 Gene3D G3DSA:1.10.150.20 359 428 1.2E-28 T 15-10-2018 XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 Pfam PF00575 S1 RNA binding domain 133 195 2.4E-5 T 15-10-2018 IPR003029 S1 domain GO:0003676 XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 SUPERFAMILY SSF69705 1 126 1.19E-40 T 15-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 Gene3D G3DSA:2.40.50.140 135 198 2.1E-18 T 15-10-2018 XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 SMART SM00316 133 200 1.7E-8 T 15-10-2018 IPR022967 RNA-binding domain, S1 XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 SUPERFAMILY SSF54814 279 334 5.23E-12 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 417 27.764 T 15-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 Pfam PF08529 NusA N-terminal domain 4 123 1.1E-35 T 15-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 SUPERFAMILY SSF50249 132 199 3.02E-17 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_0477 cbf8f86523a50d3aa3d1831cf86d0e0a 502 SUPERFAMILY SSF47794 436 499 1.73E-16 T 15-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 XDD1_0159 3128230bb3dbc96b676d0bb5c3e70a9d 167 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 161 34.06 T 15-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 XDD1_0159 3128230bb3dbc96b676d0bb5c3e70a9d 167 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 162 2.8E-69 T 15-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 XDD1_0159 3128230bb3dbc96b676d0bb5c3e70a9d 167 Pfam PF00588 SpoU rRNA Methylase family 2 151 1.7E-29 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 XDD1_0159 3128230bb3dbc96b676d0bb5c3e70a9d 167 SUPERFAMILY SSF75217 1 162 1.31E-40 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases XDD1_0159 3128230bb3dbc96b676d0bb5c3e70a9d 167 Gene3D G3DSA:3.40.1280.10 1 167 2.5E-70 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XDD1_0159 3128230bb3dbc96b676d0bb5c3e70a9d 167 PIRSF PIRSF029256 1 164 4.2E-68 T 15-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 XDD1_0106 f971853df49b25d82280f1f41a9233dd 180 SUPERFAMILY SSF53597 1 165 1.17E-27 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XDD1_0106 f971853df49b25d82280f1f41a9233dd 180 Gene3D G3DSA:3.40.430.10 1 168 1.4E-36 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XDD1_0106 f971853df49b25d82280f1f41a9233dd 180 Pfam PF01872 RibD C-terminal domain 3 149 3.2E-10 T 15-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 XDD1_2269 b828cd5d9d34d7578b2e2b1beb6aa122 347 Gene3D G3DSA:3.30.420.470 155 335 7.6E-13 T 15-10-2018 XDD1_2269 b828cd5d9d34d7578b2e2b1beb6aa122 347 Pfam PF13384 Homeodomain-like domain 26 73 4.0E-10 T 15-10-2018 XDD1_2269 b828cd5d9d34d7578b2e2b1beb6aa122 347 Pfam PF13358 DDE superfamily endonuclease 177 310 7.4E-29 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2269 b828cd5d9d34d7578b2e2b1beb6aa122 347 SUPERFAMILY SSF46689 14 140 1.68E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2269 b828cd5d9d34d7578b2e2b1beb6aa122 347 Pfam PF13592 Winged helix-turn helix 108 156 1.0E-6 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_1242 6ad00846667fbb28ef0cc3215d79abb3 255 PRINTS PR01714 Ferric iron reductase signature 49 66 5.4E-37 T 15-10-2018 IPR008090 Ferric iron reductase XDD1_1242 6ad00846667fbb28ef0cc3215d79abb3 255 PRINTS PR01714 Ferric iron reductase signature 85 100 5.4E-37 T 15-10-2018 IPR008090 Ferric iron reductase XDD1_1242 6ad00846667fbb28ef0cc3215d79abb3 255 PRINTS PR01714 Ferric iron reductase signature 117 131 5.4E-37 T 15-10-2018 IPR008090 Ferric iron reductase XDD1_1242 6ad00846667fbb28ef0cc3215d79abb3 255 PRINTS PR01714 Ferric iron reductase signature 205 221 5.4E-37 T 15-10-2018 IPR008090 Ferric iron reductase XDD1_1242 6ad00846667fbb28ef0cc3215d79abb3 255 PRINTS PR01714 Ferric iron reductase signature 163 179 5.4E-37 T 15-10-2018 IPR008090 Ferric iron reductase XDD1_1242 6ad00846667fbb28ef0cc3215d79abb3 255 PRINTS PR01714 Ferric iron reductase signature 231 249 5.4E-37 T 15-10-2018 IPR008090 Ferric iron reductase XDD1_1242 6ad00846667fbb28ef0cc3215d79abb3 255 Pfam PF06276 Ferric iron reductase FhuF-like transporter 85 225 2.7E-27 T 15-10-2018 IPR022770 Ferric iron reductase FhuF domain XDD1_1242 6ad00846667fbb28ef0cc3215d79abb3 255 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 79 252 3.1E-64 T 15-10-2018 IPR008090 Ferric iron reductase XDD1_1242 6ad00846667fbb28ef0cc3215d79abb3 255 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 231 251 1.5E-4 T 15-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 XDD1_0125 c22211abbf4de58ac9e83acd3e84d136 55 Pfam PF00471 Ribosomal protein L33 8 53 5.0E-18 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0125 c22211abbf4de58ac9e83acd3e84d136 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.6E-26 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0125 c22211abbf4de58ac9e83acd3e84d136 55 SUPERFAMILY SSF57829 1 53 3.36E-20 T 15-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 XDD1_0125 c22211abbf4de58ac9e83acd3e84d136 55 Gene3D G3DSA:2.20.28.120 1 55 1.2E-30 T 15-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0125 c22211abbf4de58ac9e83acd3e84d136 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.462 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0125 c22211abbf4de58ac9e83acd3e84d136 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 15-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0972 baae1e8ab66c4023c0091db12fda76e7 729 SUPERFAMILY SSF69255 467 554 6.02E-34 T 15-10-2018 XDD1_0972 baae1e8ab66c4023c0091db12fda76e7 729 Gene3D G3DSA:3.30.1920.30 325 388 3.5E-93 T 15-10-2018 XDD1_0972 baae1e8ab66c4023c0091db12fda76e7 729 Gene3D G3DSA:2.30.110.50 123 432 3.5E-93 T 15-10-2018 XDD1_0972 baae1e8ab66c4023c0091db12fda76e7 729 Gene3D G3DSA:3.55.50.10 202 293 3.5E-93 T 15-10-2018 XDD1_0972 baae1e8ab66c4023c0091db12fda76e7 729 Gene3D G3DSA:2.40.50.230 461 559 1.4E-41 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XDD1_0972 baae1e8ab66c4023c0091db12fda76e7 729 Pfam PF05954 Phage late control gene D protein (GPD) 133 431 9.4E-84 T 15-10-2018 XDD1_0972 baae1e8ab66c4023c0091db12fda76e7 729 SUPERFAMILY SSF69279 294 468 8.33E-40 T 15-10-2018 XDD1_0972 baae1e8ab66c4023c0091db12fda76e7 729 SUPERFAMILY SSF69279 114 289 3.87E-57 T 15-10-2018 XDD1_0972 baae1e8ab66c4023c0091db12fda76e7 729 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 114 623 4.9E-194 T 15-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset XDD1_0972 baae1e8ab66c4023c0091db12fda76e7 729 SUPERFAMILY SSF69349 545 729 5.49E-39 T 15-10-2018 XDD1_0972 baae1e8ab66c4023c0091db12fda76e7 729 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 126 606 7.1E-167 T 15-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein XDD1_1159 c2dc55359329abc1d910c0c65609b6a1 243 Gene3D G3DSA:2.40.240.20 1 70 1.6E-22 T 15-10-2018 XDD1_1159 c2dc55359329abc1d910c0c65609b6a1 243 Gene3D G3DSA:3.40.1280.10 74 243 6.6E-66 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XDD1_1159 c2dc55359329abc1d910c0c65609b6a1 243 SUPERFAMILY SSF75217 75 242 3.92E-52 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases XDD1_1159 c2dc55359329abc1d910c0c65609b6a1 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 1.1E-89 T 15-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 XDD1_1159 c2dc55359329abc1d910c0c65609b6a1 243 Pfam PF04452 RNA methyltransferase 19 236 1.5E-72 T 15-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 XDD1_1159 c2dc55359329abc1d910c0c65609b6a1 243 SUPERFAMILY SSF88697 2 69 5.22E-17 T 15-10-2018 IPR015947 PUA-like superfamily XDD1_1159 c2dc55359329abc1d910c0c65609b6a1 243 PIRSF PIRSF015601 2 242 6.0E-54 T 15-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 XDD1_1041 d32e0552c6e5239cf969ecc44d2c34cc 641 Gene3D G3DSA:2.20.150.10 22 117 1.4E-93 T 15-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 XDD1_1041 d32e0552c6e5239cf969ecc44d2c34cc 641 Pfam PF00294 pfkB family carbohydrate kinase 15 330 3.0E-47 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB XDD1_1041 d32e0552c6e5239cf969ecc44d2c34cc 641 Gene3D G3DSA:3.40.1190.20 17 320 1.4E-93 T 15-10-2018 IPR029056 Ribokinase-like XDD1_1041 d32e0552c6e5239cf969ecc44d2c34cc 641 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 282 295 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 XDD1_1041 d32e0552c6e5239cf969ecc44d2c34cc 641 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 13 338 2.0E-128 T 15-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 XDD1_1041 d32e0552c6e5239cf969ecc44d2c34cc 641 SUPERFAMILY SSF53613 12 337 1.54E-73 T 15-10-2018 IPR029056 Ribokinase-like XDD1_1041 d32e0552c6e5239cf969ecc44d2c34cc 641 Gene3D G3DSA:3.20.20.70 350 639 3.0E-45 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_1041 d32e0552c6e5239cf969ecc44d2c34cc 641 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 333 640 9.5E-140 T 15-10-2018 IPR018659 Protein of unknown function DUF2090 XDD1_1636 2d7b99624369af3e298a87983841aefe 137 SUPERFAMILY SSF51735 4 135 1.3E-42 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1636 2d7b99624369af3e298a87983841aefe 137 Gene3D G3DSA:3.40.50.720 1 137 1.6E-41 T 15-10-2018 XDD1_1636 2d7b99624369af3e298a87983841aefe 137 SMART SM00881 10 104 2.2E-22 T 15-10-2018 IPR003781 CoA-binding GO:0048037 XDD1_1636 2d7b99624369af3e298a87983841aefe 137 Pfam PF13380 CoA binding domain 14 130 1.5E-37 T 15-10-2018 IPR003781 CoA-binding GO:0048037 XDD1_0794 6fe0c93a5adffc1da6aa87cad9e09f2e 221 Pfam PF10144 Bacterial virulence factor haemolysin 1 162 4.4E-64 T 15-10-2018 IPR019305 Uncharacterised protein family Smp XDD1_2225 91572eedbbbfcc643ed03c8fbf5282e4 161 Gene3D G3DSA:3.10.129.10 15 158 6.5E-43 T 15-10-2018 XDD1_2225 91572eedbbbfcc643ed03c8fbf5282e4 161 SUPERFAMILY SSF54637 24 150 2.2E-39 T 15-10-2018 IPR029069 HotDog domain superfamily XDD1_2225 91572eedbbbfcc643ed03c8fbf5282e4 161 Pfam PF03061 Thioesterase superfamily 42 113 2.9E-19 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 XDD1_3014 b17d53df302150b50c1ec1ea08bba11f 430 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 21 397 8.1E-162 T 15-10-2018 IPR020823 Cell division protein FtsA XDD1_3014 b17d53df302150b50c1ec1ea08bba11f 430 SUPERFAMILY SSF53067 210 396 2.38E-48 T 15-10-2018 XDD1_3014 b17d53df302150b50c1ec1ea08bba11f 430 Gene3D G3DSA:3.30.1490.110 99 181 1.0E-116 T 15-10-2018 XDD1_3014 b17d53df302150b50c1ec1ea08bba11f 430 Gene3D G3DSA:3.30.420.40 209 371 1.0E-116 T 15-10-2018 XDD1_3014 b17d53df302150b50c1ec1ea08bba11f 430 Pfam PF02491 SHS2 domain inserted in FTSA 97 174 1.1E-29 T 15-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 XDD1_3014 b17d53df302150b50c1ec1ea08bba11f 430 Gene3D G3DSA:3.30.420.40 25 391 1.0E-116 T 15-10-2018 XDD1_3014 b17d53df302150b50c1ec1ea08bba11f 430 Gene3D G3DSA:3.90.640.10 247 312 1.0E-116 T 15-10-2018 XDD1_3014 b17d53df302150b50c1ec1ea08bba11f 430 Pfam PF14450 Cell division protein FtsA 219 393 1.2E-25 T 15-10-2018 XDD1_3014 b17d53df302150b50c1ec1ea08bba11f 430 PIRSF PIRSF003101 13 430 9.1E-154 T 15-10-2018 IPR020823 Cell division protein FtsA XDD1_3014 b17d53df302150b50c1ec1ea08bba11f 430 SMART SM00842 22 208 9.7E-96 T 15-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 XDD1_3014 b17d53df302150b50c1ec1ea08bba11f 430 Hamap MF_02033 Cell division protein FtsA [ftsA]. 18 430 29.703 T 15-10-2018 IPR020823 Cell division protein FtsA XDD1_3014 b17d53df302150b50c1ec1ea08bba11f 430 SUPERFAMILY SSF53067 20 233 1.49E-61 T 15-10-2018 XDD1_1867 a5d1ea7f0de6518ec29f073757fc300a 423 Gene3D G3DSA:3.10.290.10 330 423 4.7E-27 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XDD1_1867 a5d1ea7f0de6518ec29f073757fc300a 423 Gene3D G3DSA:1.10.240.10 227 329 1.6E-36 T 15-10-2018 XDD1_1867 a5d1ea7f0de6518ec29f073757fc300a 423 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_1867 a5d1ea7f0de6518ec29f073757fc300a 423 Pfam PF01479 S4 domain 358 396 2.2E-5 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_1867 a5d1ea7f0de6518ec29f073757fc300a 423 SMART SM00363 356 418 2.5E-4 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_1867 a5d1ea7f0de6518ec29f073757fc300a 423 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 423 1.3E-140 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XDD1_1867 a5d1ea7f0de6518ec29f073757fc300a 423 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 422 45.673 T 15-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 XDD1_1867 a5d1ea7f0de6518ec29f073757fc300a 423 Gene3D G3DSA:3.40.50.620 1 226 5.2E-92 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_1867 a5d1ea7f0de6518ec29f073757fc300a 423 Pfam PF00579 tRNA synthetases class I (W and Y) 31 327 2.2E-88 T 15-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_1867 a5d1ea7f0de6518ec29f073757fc300a 423 SUPERFAMILY SSF55174 326 422 3.14E-20 T 15-10-2018 XDD1_1867 a5d1ea7f0de6518ec29f073757fc300a 423 SUPERFAMILY SSF52374 4 327 2.49E-106 T 15-10-2018 XDD1_1867 a5d1ea7f0de6518ec29f073757fc300a 423 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 220 232 3.3E-31 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XDD1_1867 a5d1ea7f0de6518ec29f073757fc300a 423 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 187 209 3.3E-31 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XDD1_1867 a5d1ea7f0de6518ec29f073757fc300a 423 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 166 181 3.3E-31 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XDD1_1867 a5d1ea7f0de6518ec29f073757fc300a 423 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 3.3E-31 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XDD1_1075 e9d9753e34057f84c8a0a9a1d801aa7b 674 SMART SM00437 278 563 2.8E-65 T 15-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 XDD1_1075 e9d9753e34057f84c8a0a9a1d801aa7b 674 Pfam PF01751 Toprim domain 9 135 2.4E-19 T 15-10-2018 IPR006171 TOPRIM domain XDD1_1075 e9d9753e34057f84c8a0a9a1d801aa7b 674 TIGRFAM TIGR01056 topB: DNA topoisomerase III 7 668 2.9E-242 T 15-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 XDD1_1075 e9d9753e34057f84c8a0a9a1d801aa7b 674 Gene3D G3DSA:1.10.460.10 164 607 5.3E-153 T 15-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 XDD1_1075 e9d9753e34057f84c8a0a9a1d801aa7b 674 SMART SM00493 7 129 4.1E-24 T 15-10-2018 IPR006171 TOPRIM domain XDD1_1075 e9d9753e34057f84c8a0a9a1d801aa7b 674 Gene3D G3DSA:2.70.20.10 218 493 5.3E-153 T 15-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 XDD1_1075 e9d9753e34057f84c8a0a9a1d801aa7b 674 Gene3D G3DSA:1.10.290.10 287 416 5.3E-153 T 15-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 XDD1_1075 e9d9753e34057f84c8a0a9a1d801aa7b 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 9.7E-26 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_1075 e9d9753e34057f84c8a0a9a1d801aa7b 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 9.7E-26 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_1075 e9d9753e34057f84c8a0a9a1d801aa7b 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 9.7E-26 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_1075 e9d9753e34057f84c8a0a9a1d801aa7b 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 103 116 9.7E-26 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_1075 e9d9753e34057f84c8a0a9a1d801aa7b 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 9.7E-26 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_1075 e9d9753e34057f84c8a0a9a1d801aa7b 674 Pfam PF01131 DNA topoisomerase 156 597 4.3E-116 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_1075 e9d9753e34057f84c8a0a9a1d801aa7b 674 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 626 657 9.3E-8 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 XDD1_1075 e9d9753e34057f84c8a0a9a1d801aa7b 674 SMART SM00436 129 224 2.5E-31 T 15-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 XDD1_1075 e9d9753e34057f84c8a0a9a1d801aa7b 674 SUPERFAMILY SSF57783 623 657 6.46E-8 T 15-10-2018 XDD1_1075 e9d9753e34057f84c8a0a9a1d801aa7b 674 Gene3D G3DSA:3.40.50.140 7 155 5.2E-50 T 15-10-2018 XDD1_1075 e9d9753e34057f84c8a0a9a1d801aa7b 674 SUPERFAMILY SSF56712 7 610 5.76E-180 T 15-10-2018 IPR023405 DNA topoisomerase, type IA, core domain XDD1_2063 2d2f7465fba6ae43aa7ad60495495806 247 Gene3D G3DSA:1.10.10.200 1 81 2.9E-34 T 15-10-2018 IPR017856 Integrase-like, N-terminal XDD1_2063 2d2f7465fba6ae43aa7ad60495495806 247 Gene3D G3DSA:3.30.70.980 85 236 2.8E-61 T 15-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_2063 2d2f7465fba6ae43aa7ad60495495806 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 37.205 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_2063 2d2f7465fba6ae43aa7ad60495495806 247 Gene3D G3DSA:3.30.70.980 130 205 2.8E-61 T 15-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_2063 2d2f7465fba6ae43aa7ad60495495806 247 SUPERFAMILY SSF75625 3 244 4.45E-98 T 15-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_2063 2d2f7465fba6ae43aa7ad60495495806 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 5.0E-106 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_2063 2d2f7465fba6ae43aa7ad60495495806 247 Pfam PF01709 Transcriptional regulator 5 236 2.6E-96 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_1184 da6ee4ecf8fef130b11fb165743c8dba 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 5.2E-12 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_1184 da6ee4ecf8fef130b11fb165743c8dba 198 SUPERFAMILY SSF48498 81 192 2.35E-20 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily XDD1_1184 da6ee4ecf8fef130b11fb165743c8dba 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 15-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site XDD1_1184 da6ee4ecf8fef130b11fb165743c8dba 198 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 4.4E-76 T 15-10-2018 IPR017757 Transcriptional repressor BetI XDD1_1184 da6ee4ecf8fef130b11fb165743c8dba 198 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 84 191 6.9E-32 T 15-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal XDD1_1184 da6ee4ecf8fef130b11fb165743c8dba 198 Gene3D G3DSA:1.10.357.10 5 196 5.0E-43 T 15-10-2018 XDD1_1184 da6ee4ecf8fef130b11fb165743c8dba 198 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 100.16 T 15-10-2018 IPR017757 Transcriptional repressor BetI XDD1_1184 da6ee4ecf8fef130b11fb165743c8dba 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 9.8E-6 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_1184 da6ee4ecf8fef130b11fb165743c8dba 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 9.8E-6 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_1184 da6ee4ecf8fef130b11fb165743c8dba 198 SUPERFAMILY SSF46689 3 80 8.72E-16 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3962 9af15b1a4e8c75a943b628e037c84ac2 195 SUPERFAMILY SSF53706 36 195 9.82E-56 T 15-10-2018 XDD1_3962 9af15b1a4e8c75a943b628e037c84ac2 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 103 2.8E-19 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_3962 9af15b1a4e8c75a943b628e037c84ac2 195 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 15-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 XDD1_3962 9af15b1a4e8c75a943b628e037c84ac2 195 Gene3D G3DSA:3.40.50.740 107 195 3.8E-34 T 15-10-2018 XDD1_3962 9af15b1a4e8c75a943b628e037c84ac2 195 Pfam PF00384 Molybdopterin oxidoreductase 107 144 1.0E-5 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_3962 9af15b1a4e8c75a943b628e037c84ac2 195 SMART SM00926 43 104 2.9E-22 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_3962 9af15b1a4e8c75a943b628e037c84ac2 195 Gene3D G3DSA:2.20.25.90 44 105 1.5E-16 T 15-10-2018 XDD1_2997 871be02b1b5c43f2a3b571c9b0e8bbc9 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.1E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_2997 871be02b1b5c43f2a3b571c9b0e8bbc9 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.1E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_2997 871be02b1b5c43f2a3b571c9b0e8bbc9 254 SMART SM00345 15 74 7.5E-26 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_2997 871be02b1b5c43f2a3b571c9b0e8bbc9 254 SUPERFAMILY SSF46785 6 77 1.1E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_2997 871be02b1b5c43f2a3b571c9b0e8bbc9 254 Gene3D G3DSA:1.20.120.530 97 236 5.8E-26 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal XDD1_2997 871be02b1b5c43f2a3b571c9b0e8bbc9 254 Pfam PF07729 FCD domain 99 226 2.4E-16 T 15-10-2018 IPR011711 GntR, C-terminal XDD1_2997 871be02b1b5c43f2a3b571c9b0e8bbc9 254 Gene3D G3DSA:1.10.10.10 1 75 1.2E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2997 871be02b1b5c43f2a3b571c9b0e8bbc9 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.9E-22 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_2997 871be02b1b5c43f2a3b571c9b0e8bbc9 254 SMART SM00895 99 227 2.0E-13 T 15-10-2018 IPR011711 GntR, C-terminal XDD1_2997 871be02b1b5c43f2a3b571c9b0e8bbc9 254 SUPERFAMILY SSF48008 95 235 1.1E-18 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal XDD1_1173 93d749a88cdc90c19f06532d25bd82b5 265 SMART SM00900 151 248 4.4E-27 T 15-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 XDD1_1173 93d749a88cdc90c19f06532d25bd82b5 265 Pfam PF04205 FMN-binding domain 151 245 2.3E-13 T 15-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 XDD1_1173 93d749a88cdc90c19f06532d25bd82b5 265 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 10 256 1.4E-86 T 15-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 XDD1_1173 93d749a88cdc90c19f06532d25bd82b5 265 PIRSF PIRSF009437 4 263 3.1E-94 T 15-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 XDD1_1173 93d749a88cdc90c19f06532d25bd82b5 265 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 11 260 34.789 T 15-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 XDD1_2294 c3f475da40d61cfe618199d11a584a22 494 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 491 9.6E-226 T 15-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 XDD1_2294 c3f475da40d61cfe618199d11a584a22 494 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 15-10-2018 IPR018212 Sodium/solute symporter, conserved site XDD1_2294 c3f475da40d61cfe618199d11a584a22 494 Pfam PF00474 Sodium:solute symporter family 35 437 2.1E-133 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 XDD1_2294 c3f475da40d61cfe618199d11a584a22 494 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 15-10-2018 IPR018212 Sodium/solute symporter, conserved site XDD1_2294 c3f475da40d61cfe618199d11a584a22 494 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 1.1E-118 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 XDD1_2294 c3f475da40d61cfe618199d11a584a22 494 Gene3D G3DSA:1.20.1730.10 8 494 4.9E-94 T 15-10-2018 IPR038377 Sodium/glucose symporter superfamily XDD1_0639 2b3b8bbe4730597d7fdd062cf80f7743 185 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 101 124 5.7E-31 T 15-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 XDD1_0639 2b3b8bbe4730597d7fdd062cf80f7743 185 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 146 167 5.7E-31 T 15-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 XDD1_0639 2b3b8bbe4730597d7fdd062cf80f7743 185 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 57 69 5.7E-31 T 15-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 XDD1_0639 2b3b8bbe4730597d7fdd062cf80f7743 185 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 173 184 5.7E-31 T 15-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 XDD1_0639 2b3b8bbe4730597d7fdd062cf80f7743 185 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 58 66 - T 15-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 XDD1_0639 2b3b8bbe4730597d7fdd062cf80f7743 185 Pfam PF13505 Outer membrane protein beta-barrel domain 7 185 2.1E-23 T 15-10-2018 IPR027385 Outer membrane protein beta-barrel XDD1_0639 2b3b8bbe4730597d7fdd062cf80f7743 185 Gene3D G3DSA:2.40.160.20 23 185 2.0E-49 T 15-10-2018 XDD1_0639 2b3b8bbe4730597d7fdd062cf80f7743 185 SUPERFAMILY SSF56925 27 185 7.59E-28 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel XDD1_1540 b8a3c10340ee045f9e9bee0d09388216 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 215 2.5E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_1540 b8a3c10340ee045f9e9bee0d09388216 223 Gene3D G3DSA:1.10.3720.10 1 217 3.1E-36 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_1540 b8a3c10340ee045f9e9bee0d09388216 223 SUPERFAMILY SSF161098 8 201 4.84E-28 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_1540 b8a3c10340ee045f9e9bee0d09388216 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 111 1.3E-14 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 XDD1_3790 9db3fc6e4b0b70a9399e695098dd217c 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.584 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XDD1_3790 9db3fc6e4b0b70a9399e695098dd217c 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 1.1E-212 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XDD1_3790 9db3fc6e4b0b70a9399e695098dd217c 689 SUPERFAMILY SSF109604 339 539 4.19E-16 T 15-10-2018 XDD1_3790 9db3fc6e4b0b70a9399e695098dd217c 689 Pfam PF05746 DALR anticodon binding domain 582 678 1.2E-8 T 15-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 XDD1_3790 9db3fc6e4b0b70a9399e695098dd217c 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XDD1_3790 9db3fc6e4b0b70a9399e695098dd217c 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 5.5E-37 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XDD1_3790 9db3fc6e4b0b70a9399e695098dd217c 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 5.5E-37 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XDD1_3790 9db3fc6e4b0b70a9399e695098dd217c 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 5.5E-37 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XDD1_3790 9db3fc6e4b0b70a9399e695098dd217c 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 5.5E-37 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XDD1_3790 9db3fc6e4b0b70a9399e695098dd217c 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 5.5E-37 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XDD1_2593 0c78cb3699c183f7b8d2c74d6528be12 599 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 105 160 1.0E-21 T 15-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2593 0c78cb3699c183f7b8d2c74d6528be12 599 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 215 599 6.6E-176 T 15-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2593 0c78cb3699c183f7b8d2c74d6528be12 599 Gene3D G3DSA:1.10.645.20 214 599 6.7E-145 T 15-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2593 0c78cb3699c183f7b8d2c74d6528be12 599 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 211 599 42.031 T 15-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2593 0c78cb3699c183f7b8d2c74d6528be12 599 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 49 175 7.4E-44 T 15-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2593 0c78cb3699c183f7b8d2c74d6528be12 599 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 138 159 - T 15-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2593 0c78cb3699c183f7b8d2c74d6528be12 599 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 252 263 - T 15-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2593 0c78cb3699c183f7b8d2c74d6528be12 599 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 16 599 72.607 T 15-10-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 XDD1_2593 0c78cb3699c183f7b8d2c74d6528be12 599 SUPERFAMILY SSF143243 26 229 1.07E-58 T 15-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2593 0c78cb3699c183f7b8d2c74d6528be12 599 SUPERFAMILY SSF56762 225 599 2.09E-123 T 15-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2593 0c78cb3699c183f7b8d2c74d6528be12 599 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 50 177 7.0E-41 T 15-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2593 0c78cb3699c183f7b8d2c74d6528be12 599 Gene3D G3DSA:3.30.460.80 3 157 2.4E-35 T 15-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2593 0c78cb3699c183f7b8d2c74d6528be12 599 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 329 599 7.8E-104 T 15-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_0672 fb4c50e87338695fd96056b5b835a692 327 Pfam PF13936 Helix-turn-helix domain 3 45 6.5E-15 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_0672 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF53098 169 319 1.67E-26 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0672 fb4c50e87338695fd96056b5b835a692 327 Pfam PF00665 Integrase core domain 171 273 8.8E-13 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_0672 fb4c50e87338695fd96056b5b835a692 327 Gene3D G3DSA:3.30.420.10 163 324 2.7E-10 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_0672 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF46689 5 116 1.25E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2406 fb4c50e87338695fd96056b5b835a692 327 Pfam PF13936 Helix-turn-helix domain 3 45 6.5E-15 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_2406 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF53098 169 319 1.67E-26 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_2406 fb4c50e87338695fd96056b5b835a692 327 Pfam PF00665 Integrase core domain 171 273 8.8E-13 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_2406 fb4c50e87338695fd96056b5b835a692 327 Gene3D G3DSA:3.30.420.10 163 324 2.7E-10 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_2406 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF46689 5 116 1.25E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1288 fb4c50e87338695fd96056b5b835a692 327 Pfam PF13936 Helix-turn-helix domain 3 45 6.5E-15 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_1288 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF53098 169 319 1.67E-26 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_1288 fb4c50e87338695fd96056b5b835a692 327 Pfam PF00665 Integrase core domain 171 273 8.8E-13 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_1288 fb4c50e87338695fd96056b5b835a692 327 Gene3D G3DSA:3.30.420.10 163 324 2.7E-10 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_1288 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF46689 5 116 1.25E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1720 fb4c50e87338695fd96056b5b835a692 327 Pfam PF13936 Helix-turn-helix domain 3 45 6.5E-15 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_1720 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF53098 169 319 1.67E-26 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_1720 fb4c50e87338695fd96056b5b835a692 327 Pfam PF00665 Integrase core domain 171 273 8.8E-13 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_1720 fb4c50e87338695fd96056b5b835a692 327 Gene3D G3DSA:3.30.420.10 163 324 2.7E-10 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_1720 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF46689 5 116 1.25E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2445 fb4c50e87338695fd96056b5b835a692 327 Pfam PF13936 Helix-turn-helix domain 3 45 6.5E-15 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_2445 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF53098 169 319 1.67E-26 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_2445 fb4c50e87338695fd96056b5b835a692 327 Pfam PF00665 Integrase core domain 171 273 8.8E-13 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_2445 fb4c50e87338695fd96056b5b835a692 327 Gene3D G3DSA:3.30.420.10 163 324 2.7E-10 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_2445 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF46689 5 116 1.25E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2553 fb4c50e87338695fd96056b5b835a692 327 Pfam PF13936 Helix-turn-helix domain 3 45 6.5E-15 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_2553 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF53098 169 319 1.67E-26 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_2553 fb4c50e87338695fd96056b5b835a692 327 Pfam PF00665 Integrase core domain 171 273 8.8E-13 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_2553 fb4c50e87338695fd96056b5b835a692 327 Gene3D G3DSA:3.30.420.10 163 324 2.7E-10 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_2553 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF46689 5 116 1.25E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0997 fb4c50e87338695fd96056b5b835a692 327 Pfam PF13936 Helix-turn-helix domain 3 45 6.5E-15 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_0997 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF53098 169 319 1.67E-26 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0997 fb4c50e87338695fd96056b5b835a692 327 Pfam PF00665 Integrase core domain 171 273 8.8E-13 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_0997 fb4c50e87338695fd96056b5b835a692 327 Gene3D G3DSA:3.30.420.10 163 324 2.7E-10 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_0997 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF46689 5 116 1.25E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1403 fb4c50e87338695fd96056b5b835a692 327 Pfam PF13936 Helix-turn-helix domain 3 45 6.5E-15 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_1403 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF53098 169 319 1.67E-26 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_1403 fb4c50e87338695fd96056b5b835a692 327 Pfam PF00665 Integrase core domain 171 273 8.8E-13 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_1403 fb4c50e87338695fd96056b5b835a692 327 Gene3D G3DSA:3.30.420.10 163 324 2.7E-10 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_1403 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF46689 5 116 1.25E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0973 fb4c50e87338695fd96056b5b835a692 327 Pfam PF13936 Helix-turn-helix domain 3 45 6.5E-15 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_0973 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF53098 169 319 1.67E-26 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0973 fb4c50e87338695fd96056b5b835a692 327 Pfam PF00665 Integrase core domain 171 273 8.8E-13 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_0973 fb4c50e87338695fd96056b5b835a692 327 Gene3D G3DSA:3.30.420.10 163 324 2.7E-10 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_0973 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF46689 5 116 1.25E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0553 fb4c50e87338695fd96056b5b835a692 327 Pfam PF13936 Helix-turn-helix domain 3 45 6.5E-15 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_0553 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF53098 169 319 1.67E-26 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0553 fb4c50e87338695fd96056b5b835a692 327 Pfam PF00665 Integrase core domain 171 273 8.8E-13 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_0553 fb4c50e87338695fd96056b5b835a692 327 Gene3D G3DSA:3.30.420.10 163 324 2.7E-10 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_0553 fb4c50e87338695fd96056b5b835a692 327 SUPERFAMILY SSF46689 5 116 1.25E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1875 efb6618b9ea4677c8e428a1b7694a288 334 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 XDD1_1875 efb6618b9ea4677c8e428a1b7694a288 334 Pfam PF02954 Bacterial regulatory protein, Fis family 288 320 6.4E-8 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XDD1_1875 efb6618b9ea4677c8e428a1b7694a288 334 Gene3D G3DSA:1.10.10.60 266 332 6.5E-9 T 15-10-2018 XDD1_1875 efb6618b9ea4677c8e428a1b7694a288 334 SUPERFAMILY SSF52540 10 240 3.46E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1875 efb6618b9ea4677c8e428a1b7694a288 334 SUPERFAMILY SSF46689 222 328 6.27E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1875 efb6618b9ea4677c8e428a1b7694a288 334 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site XDD1_1875 efb6618b9ea4677c8e428a1b7694a288 334 Gene3D G3DSA:1.10.8.60 180 263 5.2E-26 T 15-10-2018 XDD1_1875 efb6618b9ea4677c8e428a1b7694a288 334 Pfam PF00158 Sigma-54 interaction domain 9 170 5.5E-62 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 XDD1_1875 efb6618b9ea4677c8e428a1b7694a288 334 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 326 8.3E-160 T 15-10-2018 IPR014317 Transcription activator PspF XDD1_1875 efb6618b9ea4677c8e428a1b7694a288 334 SMART SM00382 28 180 2.8E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1875 efb6618b9ea4677c8e428a1b7694a288 334 Gene3D G3DSA:3.40.50.300 3 179 2.2E-59 T 15-10-2018 XDD1_3034 1d8817929781331a44fe31280984ddb2 378 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 21 369 3.4E-166 T 15-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 XDD1_3034 1d8817929781331a44fe31280984ddb2 378 Gene3D G3DSA:3.40.718.10 17 378 3.3E-157 T 15-10-2018 XDD1_3034 1d8817929781331a44fe31280984ddb2 378 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 21 370 1.6E-136 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 XDD1_3034 1d8817929781331a44fe31280984ddb2 378 SMART SM01329 21 370 4.0E-201 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 XDD1_3034 1d8817929781331a44fe31280984ddb2 378 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 262 281 - T 15-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 XDD1_3034 1d8817929781331a44fe31280984ddb2 378 SUPERFAMILY SSF53659 14 374 4.03E-124 T 15-10-2018 XDD1_3034 1d8817929781331a44fe31280984ddb2 378 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 20 374 51.244 T 15-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 XDD1_0499 994a004e94e79f0b292c3ad63b5f0848 642 SUPERFAMILY SSF51998 51 617 6.71E-190 T 15-10-2018 XDD1_0499 994a004e94e79f0b292c3ad63b5f0848 642 ProSitePatterns PS00850 Glycine radical domain signature. 606 614 - T 15-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site XDD1_0499 994a004e94e79f0b292c3ad63b5f0848 642 Gene3D G3DSA:3.20.70.20 51 617 2.5E-229 T 15-10-2018 XDD1_0499 994a004e94e79f0b292c3ad63b5f0848 642 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 46 635 7.8E-179 T 15-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 XDD1_0499 994a004e94e79f0b292c3ad63b5f0848 642 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 45 635 5.0E-198 T 15-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 XDD1_1207 616085e00efe046aa4014e496ffc9d0e 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.075 T 15-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1207 616085e00efe046aa4014e496ffc9d0e 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 7.5E-29 T 15-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1207 616085e00efe046aa4014e496ffc9d0e 82 Gene3D G3DSA:3.30.1320.10 1 82 1.1E-30 T 15-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1207 616085e00efe046aa4014e496ffc9d0e 82 Pfam PF00886 Ribosomal protein S16 8 68 8.6E-24 T 15-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1207 616085e00efe046aa4014e496ffc9d0e 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 15-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_1207 616085e00efe046aa4014e496ffc9d0e 82 SUPERFAMILY SSF54565 1 76 7.72E-29 T 15-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_2668 acd0242c610242780aae013f00ee8e76 1084 Gene3D G3DSA:1.10.1200.10 987 1066 8.3E-25 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2668 acd0242c610242780aae013f00ee8e76 1084 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 504 912 6.4E-136 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2668 acd0242c610242780aae013f00ee8e76 1084 SUPERFAMILY SSF52777 188 468 9.45E-45 T 15-10-2018 XDD1_2668 acd0242c610242780aae013f00ee8e76 1084 ProSitePatterns PS00455 Putative AMP-binding domain signature. 630 641 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2668 acd0242c610242780aae013f00ee8e76 1084 Pfam PF00550 Phosphopantetheine attachment site 1000 1062 2.8E-13 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2668 acd0242c610242780aae013f00ee8e76 1084 Pfam PF00501 AMP-binding enzyme 484 888 4.8E-106 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2668 acd0242c610242780aae013f00ee8e76 1084 Gene3D G3DSA:3.40.50.12780 473 880 3.5E-139 T 15-10-2018 XDD1_2668 acd0242c610242780aae013f00ee8e76 1084 SMART SM00823 Phosphopantetheine attachment site 998 1067 0.0024 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2668 acd0242c610242780aae013f00ee8e76 1084 Gene3D G3DSA:3.30.559.30 184 448 1.6E-88 T 15-10-2018 XDD1_2668 acd0242c610242780aae013f00ee8e76 1084 Gene3D G3DSA:3.30.559.10 11 380 1.6E-88 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2668 acd0242c610242780aae013f00ee8e76 1084 Pfam PF00668 Condensation domain 9 460 6.7E-70 T 15-10-2018 IPR001242 Condensation domain XDD1_2668 acd0242c610242780aae013f00ee8e76 1084 Gene3D G3DSA:3.30.300.30 882 986 1.0E-36 T 15-10-2018 XDD1_2668 acd0242c610242780aae013f00ee8e76 1084 SUPERFAMILY SSF52777 12 180 2.0E-30 T 15-10-2018 XDD1_2668 acd0242c610242780aae013f00ee8e76 1084 SUPERFAMILY SSF56801 441 1011 2.22E-164 T 15-10-2018 XDD1_2668 acd0242c610242780aae013f00ee8e76 1084 Pfam PF13193 AMP-binding enzyme C-terminal domain 896 971 5.8E-11 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2668 acd0242c610242780aae013f00ee8e76 1084 SUPERFAMILY SSF47336 991 1063 1.03E-18 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2881 639c6d44192f479524745bdbb8def733 560 Gene3D G3DSA:1.10.8.60 402 488 1.0E-13 T 15-10-2018 XDD1_2881 639c6d44192f479524745bdbb8def733 560 Pfam PF00158 Sigma-54 interaction domain 222 396 2.7E-61 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 XDD1_2881 639c6d44192f479524745bdbb8def733 560 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 447 456 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site XDD1_2881 639c6d44192f479524745bdbb8def733 560 SUPERFAMILY SSF159800 12 195 1.44E-53 T 15-10-2018 XDD1_2881 639c6d44192f479524745bdbb8def733 560 SUPERFAMILY SSF52540 220 465 1.01E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2881 639c6d44192f479524745bdbb8def733 560 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 245 258 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 XDD1_2881 639c6d44192f479524745bdbb8def733 560 SMART SM00382 241 397 2.7E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_2881 639c6d44192f479524745bdbb8def733 560 SUPERFAMILY SSF46689 447 549 3.29E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2881 639c6d44192f479524745bdbb8def733 560 TIGRFAM TIGR02329 propionate_PrpR: propionate catabolism operon regulatory protein PrpR 9 548 2.0E-262 T 15-10-2018 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR GO:0000156|GO:0000160|GO:0003677|GO:0005737|GO:0019629 XDD1_2881 639c6d44192f479524745bdbb8def733 560 Pfam PF06506 Propionate catabolism activator 34 197 3.2E-50 T 15-10-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 XDD1_2881 639c6d44192f479524745bdbb8def733 560 Gene3D G3DSA:3.40.50.300 208 401 3.1E-59 T 15-10-2018 XDD1_2881 639c6d44192f479524745bdbb8def733 560 Pfam PF02954 Bacterial regulatory protein, Fis family 519 549 1.2E-8 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XDD1_2881 639c6d44192f479524745bdbb8def733 560 Gene3D G3DSA:3.40.50.2300 20 192 1.3E-67 T 15-10-2018 XDD1_2881 639c6d44192f479524745bdbb8def733 560 Gene3D G3DSA:1.10.10.60 513 549 3.1E-8 T 15-10-2018 XDD1_2881 639c6d44192f479524745bdbb8def733 560 Gene3D G3DSA:3.40.50.10660 89 176 1.3E-67 T 15-10-2018 XDD1_3176 940e12b917bc2cc28c8167b3e293ccd7 223 SUPERFAMILY SSF102114 23 196 6.28E-7 T 15-10-2018 XDD1_3176 940e12b917bc2cc28c8167b3e293ccd7 223 PIRSF PIRSF000370 1 223 4.6E-70 T 15-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 XDD1_3176 940e12b917bc2cc28c8167b3e293ccd7 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 37.624 T 15-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 XDD1_3176 940e12b917bc2cc28c8167b3e293ccd7 223 Pfam PF04055 Radical SAM superfamily 27 124 5.1E-8 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XDD1_3176 940e12b917bc2cc28c8167b3e293ccd7 223 Gene3D G3DSA:3.20.20.70 2 223 2.5E-56 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_3176 940e12b917bc2cc28c8167b3e293ccd7 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 3.3E-12 T 15-10-2018 XDD1_3176 940e12b917bc2cc28c8167b3e293ccd7 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 6.7E-111 T 15-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 XDD1_0433 4d776f2becc435db4210658806b3f9df 75 Pfam PF01084 Ribosomal protein S18 19 68 9.1E-25 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0433 4d776f2becc435db4210658806b3f9df 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 3.0E-22 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0433 4d776f2becc435db4210658806b3f9df 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 15-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0433 4d776f2becc435db4210658806b3f9df 75 Gene3D G3DSA:4.10.640.10 20 75 4.2E-29 T 15-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0433 4d776f2becc435db4210658806b3f9df 75 SUPERFAMILY SSF46911 3 74 7.06E-29 T 15-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0433 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-18 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0433 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-18 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0433 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-18 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0433 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-18 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0433 4d776f2becc435db4210658806b3f9df 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 8.1E-38 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0433 4d776f2becc435db4210658806b3f9df 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.313 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0733 f3208760c5273d7823b5241e4603cd73 407 SUPERFAMILY SSF53649 1 406 6.94E-70 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 XDD1_0733 f3208760c5273d7823b5241e4603cd73 407 SUPERFAMILY SSF143856 118 235 4.58E-49 T 15-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 XDD1_0733 f3208760c5273d7823b5241e4603cd73 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 55.361 T 15-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 XDD1_0733 f3208760c5273d7823b5241e4603cd73 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 405 8.1E-191 T 15-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 XDD1_0733 f3208760c5273d7823b5241e4603cd73 407 PIRSF PIRSF001491 1 407 4.0E-164 T 15-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 XDD1_0733 f3208760c5273d7823b5241e4603cd73 407 Pfam PF01676 Metalloenzyme superfamily 2 397 1.5E-41 T 15-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 XDD1_0733 f3208760c5273d7823b5241e4603cd73 407 Gene3D G3DSA:3.30.70.1250 115 238 1.5E-153 T 15-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 XDD1_0733 f3208760c5273d7823b5241e4603cd73 407 Gene3D G3DSA:3.40.720.10 3 405 1.5E-153 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 XDD1_3340 f6a8c9029f8ca517e712291439cede69 293 Gene3D G3DSA:1.10.3660.10 169 293 5.8E-14 T 15-10-2018 XDD1_3340 f6a8c9029f8ca517e712291439cede69 293 Pfam PF02153 Prephenate dehydrogenase 26 264 5.3E-18 T 15-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 XDD1_3340 f6a8c9029f8ca517e712291439cede69 293 SUPERFAMILY SSF48179 163 288 9.35E-25 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XDD1_3340 f6a8c9029f8ca517e712291439cede69 293 SUPERFAMILY SSF51735 4 153 9.59E-19 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_3340 f6a8c9029f8ca517e712291439cede69 293 Gene3D G3DSA:3.40.50.720 1 167 1.7E-23 T 15-10-2018 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 SUPERFAMILY SSF55424 343 466 7.04E-39 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 Gene3D G3DSA:3.30.390.30 346 467 1.0E-44 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 SUPERFAMILY SSF51905 2 337 1.54E-56 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_2994 930fcb2676e72d63c120841c231e471a 475 Gene3D G3DSA:3.50.50.60 150 271 2.6E-124 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_2994 930fcb2676e72d63c120841c231e471a 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 15-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 8.9E-62 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 1.4E-34 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 459 8.6E-149 T 15-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 Gene3D G3DSA:3.50.50.60 9 332 2.6E-124 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_2994 930fcb2676e72d63c120841c231e471a 475 PIRSF PIRSF000350 1 468 3.1E-86 T 15-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.6E-69 T 15-10-2018 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.6E-69 T 15-10-2018 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.6E-69 T 15-10-2018 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.6E-69 T 15-10-2018 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.6E-69 T 15-10-2018 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.6E-69 T 15-10-2018 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.6E-69 T 15-10-2018 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.6E-69 T 15-10-2018 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.6E-69 T 15-10-2018 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.8E-41 T 15-10-2018 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 3.8E-41 T 15-10-2018 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 3.8E-41 T 15-10-2018 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 3.8E-41 T 15-10-2018 XDD1_2994 930fcb2676e72d63c120841c231e471a 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 3.8E-41 T 15-10-2018 XDD1_3029 f53a7c849cd62d22413aee8e6631a751 163 Gene3D G3DSA:3.30.70.260 1 79 3.6E-35 T 15-10-2018 XDD1_3029 f53a7c849cd62d22413aee8e6631a751 163 Gene3D G3DSA:3.30.70.1150 80 157 1.5E-26 T 15-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal XDD1_3029 f53a7c849cd62d22413aee8e6631a751 163 SUPERFAMILY SSF55021 2 76 8.3E-22 T 15-10-2018 XDD1_3029 f53a7c849cd62d22413aee8e6631a751 163 Pfam PF13710 ACT domain 12 73 6.6E-15 T 15-10-2018 XDD1_3029 f53a7c849cd62d22413aee8e6631a751 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 7.8E-68 T 15-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 XDD1_3029 f53a7c849cd62d22413aee8e6631a751 163 SUPERFAMILY SSF55021 79 162 1.87E-25 T 15-10-2018 XDD1_3029 f53a7c849cd62d22413aee8e6631a751 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 3.0E-35 T 15-10-2018 XDD1_3029 f53a7c849cd62d22413aee8e6631a751 163 Pfam PF10369 Small subunit of acetolactate synthase 84 158 6.3E-23 T 15-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 XDD1_3163 1c779f1b72dca8da66bac5a18d290b5c 156 SUPERFAMILY SSF69765 1 156 1.06E-65 T 15-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XDD1_3163 1c779f1b72dca8da66bac5a18d290b5c 156 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.555 T 15-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XDD1_3163 1c779f1b72dca8da66bac5a18d290b5c 156 Pfam PF02542 YgbB family 1 154 5.3E-67 T 15-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XDD1_3163 1c779f1b72dca8da66bac5a18d290b5c 156 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 15-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XDD1_3163 1c779f1b72dca8da66bac5a18d290b5c 156 Gene3D G3DSA:3.30.1330.50 1 156 6.1E-72 T 15-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XDD1_3163 1c779f1b72dca8da66bac5a18d290b5c 156 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 1.9E-70 T 15-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XDD1_2371 07bd837884a78bd1170dba44c9546be9 543 Gene3D G3DSA:1.20.120.30 22 190 1.7E-31 T 15-10-2018 XDD1_2371 07bd837884a78bd1170dba44c9546be9 543 SMART SM00283 267 514 4.3E-94 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 XDD1_2371 07bd837884a78bd1170dba44c9546be9 543 SUPERFAMILY SSF47170 40 176 2.09E-31 T 15-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily XDD1_2371 07bd837884a78bd1170dba44c9546be9 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 3.1E-77 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XDD1_2371 07bd837884a78bd1170dba44c9546be9 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 3.1E-77 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XDD1_2371 07bd837884a78bd1170dba44c9546be9 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 3.1E-77 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XDD1_2371 07bd837884a78bd1170dba44c9546be9 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 3.1E-77 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XDD1_2371 07bd837884a78bd1170dba44c9546be9 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 190 210 3.1E-77 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XDD1_2371 07bd837884a78bd1170dba44c9546be9 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 3.1E-77 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XDD1_2371 07bd837884a78bd1170dba44c9546be9 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 3.1E-77 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XDD1_2371 07bd837884a78bd1170dba44c9546be9 543 SMART SM00319 44 180 4.9E-18 T 15-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 XDD1_2371 07bd837884a78bd1170dba44c9546be9 543 SMART SM00304 214 266 8.2E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 XDD1_2371 07bd837884a78bd1170dba44c9546be9 543 Pfam PF02203 Tar ligand binding domain homologue 1 170 8.1E-36 T 15-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 XDD1_2371 07bd837884a78bd1170dba44c9546be9 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 482 2.6E-56 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 XDD1_2371 07bd837884a78bd1170dba44c9546be9 543 SUPERFAMILY SSF58104 236 515 2.22E-73 T 15-10-2018 XDD1_2371 07bd837884a78bd1170dba44c9546be9 543 Gene3D G3DSA:1.10.287.950 214 516 3.8E-92 T 15-10-2018 XDD1_3854 0e4970944cb4911d44214679081435c1 307 SUPERFAMILY SSF161098 47 294 3.14E-34 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_3854 0e4970944cb4911d44214679081435c1 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 302 7.1E-31 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_3854 0e4970944cb4911d44214679081435c1 307 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 40 306 6.0E-87 T 15-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 XDD1_3854 0e4970944cb4911d44214679081435c1 307 Gene3D G3DSA:1.10.3720.10 89 306 2.1E-29 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_3589 7394c8031d090892b0ffd5ff519b8db6 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 7.0E-135 T 15-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 XDD1_3589 7394c8031d090892b0ffd5ff519b8db6 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 56.538 T 15-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 XDD1_3589 7394c8031d090892b0ffd5ff519b8db6 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 14 321 3.0E-48 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_3589 7394c8031d090892b0ffd5ff519b8db6 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 4.5E-6 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XDD1_3589 7394c8031d090892b0ffd5ff519b8db6 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 4.5E-6 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XDD1_3589 7394c8031d090892b0ffd5ff519b8db6 325 SUPERFAMILY SSF55681 13 322 1.23E-85 T 15-10-2018 XDD1_3589 7394c8031d090892b0ffd5ff519b8db6 325 Gene3D G3DSA:3.30.930.10 1 324 9.3E-125 T 15-10-2018 XDD1_2059 bf5bc07634eb0f1a1a0b83614354751a 132 Pfam PF01124 MAPEG family 4 120 1.8E-25 T 15-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein XDD1_2059 bf5bc07634eb0f1a1a0b83614354751a 132 SUPERFAMILY SSF161084 4 125 1.7E-29 T 15-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily XDD1_2059 bf5bc07634eb0f1a1a0b83614354751a 132 Gene3D G3DSA:1.20.120.550 1 129 4.3E-25 T 15-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily XDD1_1345 c8ea3990a1d3dc25ee8b8d4b4142aaf9 289 Gene3D G3DSA:3.40.50.261 124 289 2.2E-77 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XDD1_1345 c8ea3990a1d3dc25ee8b8d4b4142aaf9 289 SMART SM00881 4 100 8.7E-37 T 15-10-2018 IPR003781 CoA-binding GO:0048037 XDD1_1345 c8ea3990a1d3dc25ee8b8d4b4142aaf9 289 Gene3D G3DSA:3.40.50.720 1 123 2.4E-51 T 15-10-2018 XDD1_1345 c8ea3990a1d3dc25ee8b8d4b4142aaf9 289 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 287 7.7E-146 T 15-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XDD1_1345 c8ea3990a1d3dc25ee8b8d4b4142aaf9 289 SUPERFAMILY SSF52210 123 287 1.57E-57 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XDD1_1345 c8ea3990a1d3dc25ee8b8d4b4142aaf9 289 Pfam PF00549 CoA-ligase 151 271 1.2E-21 T 15-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XDD1_1345 c8ea3990a1d3dc25ee8b8d4b4142aaf9 289 SUPERFAMILY SSF51735 1 122 1.9E-43 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1345 c8ea3990a1d3dc25ee8b8d4b4142aaf9 289 PIRSF PIRSF001553 1 289 5.6E-135 T 15-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XDD1_1345 c8ea3990a1d3dc25ee8b8d4b4142aaf9 289 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 15-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site XDD1_1345 c8ea3990a1d3dc25ee8b8d4b4142aaf9 289 Pfam PF02629 CoA binding domain 6 99 2.9E-31 T 15-10-2018 IPR003781 CoA-binding GO:0048037 XDD1_1345 c8ea3990a1d3dc25ee8b8d4b4142aaf9 289 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 15-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site XDD1_1345 c8ea3990a1d3dc25ee8b8d4b4142aaf9 289 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.142 T 15-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XDD1_1345 c8ea3990a1d3dc25ee8b8d4b4142aaf9 289 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.6E-39 T 15-10-2018 XDD1_1345 c8ea3990a1d3dc25ee8b8d4b4142aaf9 289 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.6E-39 T 15-10-2018 XDD1_1345 c8ea3990a1d3dc25ee8b8d4b4142aaf9 289 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.6E-39 T 15-10-2018 XDD1_1345 c8ea3990a1d3dc25ee8b8d4b4142aaf9 289 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.6E-39 T 15-10-2018 XDD1_2695 e39e1d7ef26df69f5a9cbd5121fe23df 366 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 38 348 7.8E-92 T 15-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 XDD1_2695 e39e1d7ef26df69f5a9cbd5121fe23df 366 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 18 349 3.5E-126 T 15-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 XDD1_2695 e39e1d7ef26df69f5a9cbd5121fe23df 366 Gene3D G3DSA:1.20.120.1840 8 191 9.7E-56 T 15-10-2018 XDD1_2695 e39e1d7ef26df69f5a9cbd5121fe23df 366 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 7 359 34.704 T 15-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 XDD1_2695 e39e1d7ef26df69f5a9cbd5121fe23df 366 Gene3D G3DSA:3.40.50.10470 192 358 5.0E-45 T 15-10-2018 XDD1_2695 e39e1d7ef26df69f5a9cbd5121fe23df 366 SUPERFAMILY SSF100950 1 352 4.35E-110 T 15-10-2018 IPR037171 NagB/RpiA transferase-like XDD1_2695 e39e1d7ef26df69f5a9cbd5121fe23df 366 Pfam PF01008 Initiation factor 2 subunit family 52 348 1.6E-58 T 15-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 XDD1_0813 2e2e99d17dbb1823ddbaaa0357293f81 304 Pfam PF00480 ROK family 3 301 1.7E-82 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 XDD1_0813 2e2e99d17dbb1823ddbaaa0357293f81 304 SUPERFAMILY SSF53067 2 301 2.02E-59 T 15-10-2018 XDD1_0813 2e2e99d17dbb1823ddbaaa0357293f81 304 ProSitePatterns PS01125 ROK family signature. 130 157 - T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 XDD1_0813 2e2e99d17dbb1823ddbaaa0357293f81 304 Gene3D G3DSA:3.30.420.40 4 296 5.3E-79 T 15-10-2018 XDD1_0813 2e2e99d17dbb1823ddbaaa0357293f81 304 Gene3D G3DSA:3.30.420.40 119 289 5.3E-79 T 15-10-2018 XDD1_2242 c14300ce0f89462a85feed9bc07e31f6 150 Gene3D G3DSA:3.10.450.50 1 150 1.9E-56 T 15-10-2018 XDD1_2242 c14300ce0f89462a85feed9bc07e31f6 150 SUPERFAMILY SSF54427 22 127 8.23E-38 T 15-10-2018 IPR032710 NTF2-like domain superfamily XDD1_2242 c14300ce0f89462a85feed9bc07e31f6 150 Pfam PF02810 SEC-C motif 133 150 2.8E-9 T 15-10-2018 IPR004027 SEC-C motif XDD1_2242 c14300ce0f89462a85feed9bc07e31f6 150 SUPERFAMILY SSF103642 130 150 1.41E-7 T 15-10-2018 XDD1_0913 1be6a9a30375f8b96efe7ed86ec96338 370 Pfam PF02706 Chain length determinant protein 25 122 3.9E-17 T 15-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 XDD1_0913 1be6a9a30375f8b96efe7ed86ec96338 370 SUPERFAMILY SSF160355 64 329 3.66E-76 T 15-10-2018 XDD1_0913 1be6a9a30375f8b96efe7ed86ec96338 370 Gene3D G3DSA:3.30.1890.10 64 329 1.6E-82 T 15-10-2018 XDD1_0913 1be6a9a30375f8b96efe7ed86ec96338 370 Gene3D G3DSA:1.10.287.210 206 316 1.6E-82 T 15-10-2018 XDD1_3354 023a02c13657f75be2946fca72327bd1 243 Pfam PF05638 Type VI secretion system effector, Hcp 6 143 1.9E-19 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_3354 023a02c13657f75be2946fca72327bd1 243 SUPERFAMILY SSF141452 5 152 8.37E-30 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_3354 023a02c13657f75be2946fca72327bd1 243 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 153 3.1E-52 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_3354 023a02c13657f75be2946fca72327bd1 243 Gene3D G3DSA:2.30.110.20 3 157 7.8E-47 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_1920 9a2dbd2053c4b775862d24d3afb0d2f8 476 SUPERFAMILY SSF53720 3 473 5.37E-153 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XDD1_1920 9a2dbd2053c4b775862d24d3afb0d2f8 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 XDD1_1920 9a2dbd2053c4b775862d24d3afb0d2f8 476 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 XDD1_1920 9a2dbd2053c4b775862d24d3afb0d2f8 476 Gene3D G3DSA:3.40.605.10 10 469 1.7E-159 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 XDD1_1920 9a2dbd2053c4b775862d24d3afb0d2f8 476 Pfam PF00171 Aldehyde dehydrogenase family 15 471 7.3E-155 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 XDD1_1920 9a2dbd2053c4b775862d24d3afb0d2f8 476 Gene3D G3DSA:3.40.309.10 253 441 1.7E-159 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 XDD1_2387 116083416e192abec85059c3d04e1d5c 352 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 276 39.364 T 15-10-2018 IPR020936 Uncharacterised protein family UPF0176 XDD1_2387 116083416e192abec85059c3d04e1d5c 352 Gene3D G3DSA:3.30.70.100 12 118 1.6E-16 T 15-10-2018 XDD1_2387 116083416e192abec85059c3d04e1d5c 352 Pfam PF12368 Rhodanase C-terminal 246 308 1.8E-18 T 15-10-2018 IPR022111 Rhodanase, C-terminal XDD1_2387 116083416e192abec85059c3d04e1d5c 352 SUPERFAMILY SSF52821 117 271 1.96E-32 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily XDD1_2387 116083416e192abec85059c3d04e1d5c 352 Gene3D G3DSA:3.40.250.10 124 274 2.5E-45 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily XDD1_2387 116083416e192abec85059c3d04e1d5c 352 Pfam PF00581 Rhodanese-like domain 138 233 3.0E-15 T 15-10-2018 IPR001763 Rhodanese-like domain XDD1_2387 116083416e192abec85059c3d04e1d5c 352 SMART SM00450 136 237 3.8E-27 T 15-10-2018 IPR001763 Rhodanese-like domain XDD1_0866 2b88d18e3587bd4dd7754c3c9c497064 203 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 24 203 2.7E-87 T 15-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 XDD1_0866 2b88d18e3587bd4dd7754c3c9c497064 203 SUPERFAMILY SSF81452 12 201 9.42E-58 T 15-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0866 2b88d18e3587bd4dd7754c3c9c497064 203 Pfam PF00510 Cytochrome c oxidase subunit III 15 201 8.7E-15 T 15-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0866 2b88d18e3587bd4dd7754c3c9c497064 203 Gene3D G3DSA:1.20.120.80 18 203 1.4E-58 T 15-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0342 f832d43fd2f9881d52c787cc79d62be9 427 Gene3D G3DSA:3.40.50.300 225 392 3.3E-45 T 15-10-2018 XDD1_0342 f832d43fd2f9881d52c787cc79d62be9 427 SMART SM00487 28 234 7.2E-52 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XDD1_0342 f832d43fd2f9881d52c787cc79d62be9 427 SMART SM00490 270 351 6.2E-29 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_0342 f832d43fd2f9881d52c787cc79d62be9 427 Gene3D G3DSA:3.40.50.300 2 222 7.5E-69 T 15-10-2018 XDD1_0342 f832d43fd2f9881d52c787cc79d62be9 427 Pfam PF00270 DEAD/DEAH box helicase 33 206 9.8E-46 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XDD1_0342 f832d43fd2f9881d52c787cc79d62be9 427 SUPERFAMILY SSF52540 84 363 2.58E-69 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0342 f832d43fd2f9881d52c787cc79d62be9 427 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.231 T 15-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 XDD1_0342 f832d43fd2f9881d52c787cc79d62be9 427 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site XDD1_0342 f832d43fd2f9881d52c787cc79d62be9 427 Pfam PF00271 Helicase conserved C-terminal domain 243 351 8.0E-29 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_0002 729fbb4b759f8435d7270f71e446a96c 366 SUPERFAMILY SSF55979 1 118 3.11E-26 T 15-10-2018 XDD1_0002 729fbb4b759f8435d7270f71e446a96c 366 SUPERFAMILY SSF55979 125 244 1.57E-30 T 15-10-2018 XDD1_0002 729fbb4b759f8435d7270f71e446a96c 366 PIRSF PIRSF000804 1 366 7.4E-118 T 15-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 XDD1_0002 729fbb4b759f8435d7270f71e446a96c 366 SMART SM00480 17 362 4.8E-166 T 15-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 XDD1_0002 729fbb4b759f8435d7270f71e446a96c 366 SUPERFAMILY SSF55979 245 366 2.05E-37 T 15-10-2018 XDD1_0002 729fbb4b759f8435d7270f71e446a96c 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 1.2E-38 T 15-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 XDD1_0002 729fbb4b759f8435d7270f71e446a96c 366 Gene3D G3DSA:3.10.150.10 1 123 3.4E-43 T 15-10-2018 XDD1_0002 729fbb4b759f8435d7270f71e446a96c 366 Gene3D G3DSA:3.10.150.10 124 247 6.9E-40 T 15-10-2018 XDD1_0002 729fbb4b759f8435d7270f71e446a96c 366 Gene3D G3DSA:3.10.150.10 248 366 2.3E-41 T 15-10-2018 XDD1_0002 729fbb4b759f8435d7270f71e446a96c 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 3.6E-41 T 15-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 XDD1_0002 729fbb4b759f8435d7270f71e446a96c 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.6E-45 T 15-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 XDD1_0002 729fbb4b759f8435d7270f71e446a96c 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.5E-114 T 15-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 XDD1_2671 1ef919490858220c483fabfdd9f96413 343 SUPERFAMILY SSF55729 1 341 2.03E-119 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_2671 1ef919490858220c483fabfdd9f96413 343 Gene3D G3DSA:3.40.630.30 1 272 1.9E-109 T 15-10-2018 XDD1_2671 1ef919490858220c483fabfdd9f96413 343 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 339 1.3E-131 T 15-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 XDD1_2671 1ef919490858220c483fabfdd9f96413 343 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 341 9.1E-143 T 15-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 XDD1_2671 1ef919490858220c483fabfdd9f96413 343 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 341 3.9E-134 T 15-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 XDD1_1792 bf042430b75b8f9e1631347106b6e41c 285 Gene3D G3DSA:3.40.50.720 1 185 1.1E-50 T 15-10-2018 XDD1_1792 bf042430b75b8f9e1631347106b6e41c 285 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 184 280 1.1E-31 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 XDD1_1792 bf042430b75b8f9e1631347106b6e41c 285 PIRSF PIRSF000105 1 285 1.8E-74 T 15-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 XDD1_1792 bf042430b75b8f9e1631347106b6e41c 285 Gene3D G3DSA:1.10.1040.10 186 285 7.9E-33 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 XDD1_1792 bf042430b75b8f9e1631347106b6e41c 285 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2 181 1.1E-46 T 15-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 XDD1_1792 bf042430b75b8f9e1631347106b6e41c 285 SUPERFAMILY SSF48179 183 283 6.97E-32 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XDD1_1792 bf042430b75b8f9e1631347106b6e41c 285 SUPERFAMILY SSF51735 2 183 1.71E-45 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2646 9d185e347ed10fcdf2be4badf3979d5e 477 Gene3D G3DSA:1.10.287.130 198 313 9.1E-20 T 15-10-2018 XDD1_2646 9d185e347ed10fcdf2be4badf3979d5e 477 SUPERFAMILY SSF47384 230 310 7.06E-16 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XDD1_2646 9d185e347ed10fcdf2be4badf3979d5e 477 SMART SM00304 194 246 7.0E-5 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 XDD1_2646 9d185e347ed10fcdf2be4badf3979d5e 477 Gene3D G3DSA:3.30.565.10 316 472 5.2E-24 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_2646 9d185e347ed10fcdf2be4badf3979d5e 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 453 3.2E-15 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_2646 9d185e347ed10fcdf2be4badf3979d5e 477 Pfam PF00672 HAMP domain 195 242 2.0E-6 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 XDD1_2646 9d185e347ed10fcdf2be4badf3979d5e 477 SUPERFAMILY SSF55874 315 460 1.05E-25 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_2646 9d185e347ed10fcdf2be4badf3979d5e 477 Pfam PF08521 Two-component sensor kinase N-terminal 22 170 3.5E-38 T 15-10-2018 IPR013727 Two-component sensor kinase, N-terminal XDD1_2646 9d185e347ed10fcdf2be4badf3979d5e 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 412 2.8E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2646 9d185e347ed10fcdf2be4badf3979d5e 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 2.8E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2646 9d185e347ed10fcdf2be4badf3979d5e 477 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 309 2.0E-10 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_2646 9d185e347ed10fcdf2be4badf3979d5e 477 SMART SM00388 247 312 5.7E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_2646 9d185e347ed10fcdf2be4badf3979d5e 477 SMART SM00387 359 472 1.7E-24 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_0571 c4dfdfc526eb67cf70b2caf951a71727 415 Pfam PF02342 TerD domain 1 161 3.4E-29 T 15-10-2018 IPR003325 TerD domain XDD1_0571 c4dfdfc526eb67cf70b2caf951a71727 415 SUPERFAMILY SSF53300 213 389 6.52E-13 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily XDD1_0571 c4dfdfc526eb67cf70b2caf951a71727 415 Gene3D G3DSA:3.40.50.410 208 393 2.5E-8 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily XDD1_0571 c4dfdfc526eb67cf70b2caf951a71727 415 SMART SM00327 212 387 8.3E-7 T 15-10-2018 IPR002035 von Willebrand factor, type A XDD1_0571 c4dfdfc526eb67cf70b2caf951a71727 415 Gene3D G3DSA:2.60.60.30 14 159 2.2E-30 T 15-10-2018 XDD1_0571 c4dfdfc526eb67cf70b2caf951a71727 415 Pfam PF10138 vWA found in TerF C terminus 213 413 5.1E-68 T 15-10-2018 IPR019303 vWA found in TerF C terminus XDD1_3149 e6478f835288797b1e4c3be5a8ba23f6 150 Pfam PF13592 Winged helix-turn helix 108 149 8.5E-13 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_3149 e6478f835288797b1e4c3be5a8ba23f6 150 SUPERFAMILY SSF46689 25 139 2.96E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3149 e6478f835288797b1e4c3be5a8ba23f6 150 Pfam PF13551 Winged helix-turn helix 40 97 4.0E-9 T 15-10-2018 XDD1_0931 7d5fbe5ca159da8084c742efb181556f 204 SUPERFAMILY SSF63380 1 91 5.44E-21 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XDD1_0931 7d5fbe5ca159da8084c742efb181556f 204 Gene3D G3DSA:2.40.30.20 98 188 6.1E-25 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XDD1_0931 7d5fbe5ca159da8084c742efb181556f 204 Gene3D G3DSA:2.40.30.20 1 89 3.8E-24 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XDD1_0931 7d5fbe5ca159da8084c742efb181556f 204 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 203 2.6E-52 T 15-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XDD1_0931 7d5fbe5ca159da8084c742efb181556f 204 PIRSF PIRSF000498 1 204 1.4E-51 T 15-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XDD1_0931 7d5fbe5ca159da8084c742efb181556f 204 Pfam PF00677 Lumazine binding domain 101 186 3.2E-17 T 15-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XDD1_0931 7d5fbe5ca159da8084c742efb181556f 204 Pfam PF00677 Lumazine binding domain 3 86 2.0E-15 T 15-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XDD1_0931 7d5fbe5ca159da8084c742efb181556f 204 SUPERFAMILY SSF63380 94 200 5.02E-26 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XDD1_1359 8daa5fa9b0e4b0b86fdeb01b4c506692 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 1.5E-175 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 XDD1_1359 8daa5fa9b0e4b0b86fdeb01b4c506692 350 Gene3D G3DSA:3.20.20.70 1 350 5.5E-170 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_1359 8daa5fa9b0e4b0b86fdeb01b4c506692 350 PIRSF PIRSF001361 1 350 1.1E-163 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 XDD1_1359 8daa5fa9b0e4b0b86fdeb01b4c506692 350 SUPERFAMILY SSF51569 7 348 2.3E-138 T 15-10-2018 XDD1_1359 8daa5fa9b0e4b0b86fdeb01b4c506692 350 Pfam PF00793 DAHP synthetase I family 38 338 1.8E-109 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XDD1_0942 4e52885c9a5a39079571f2e199ff574f 460 SMART SM00840 341 402 1.2E-27 T 15-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 XDD1_0942 4e52885c9a5a39079571f2e199ff574f 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 5.7E-30 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 XDD1_0942 4e52885c9a5a39079571f2e199ff574f 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 5.7E-30 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 XDD1_0942 4e52885c9a5a39079571f2e199ff574f 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 5.7E-30 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 XDD1_0942 4e52885c9a5a39079571f2e199ff574f 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 5.7E-30 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 XDD1_0942 4e52885c9a5a39079571f2e199ff574f 460 Pfam PF09190 DALR domain 341 402 3.2E-24 T 15-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 XDD1_0942 4e52885c9a5a39079571f2e199ff574f 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.367 T 15-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 XDD1_0942 4e52885c9a5a39079571f2e199ff574f 460 SUPERFAMILY SSF47323 316 459 1.09E-42 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_0942 4e52885c9a5a39079571f2e199ff574f 460 Gene3D G3DSA:1.20.120.640 306 460 1.0E-56 T 15-10-2018 XDD1_0942 4e52885c9a5a39079571f2e199ff574f 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 2.2E-141 T 15-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 XDD1_0942 4e52885c9a5a39079571f2e199ff574f 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 5.9E-193 T 15-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 XDD1_0942 4e52885c9a5a39079571f2e199ff574f 460 SUPERFAMILY SSF52374 1 313 2.95E-103 T 15-10-2018 XDD1_0942 4e52885c9a5a39079571f2e199ff574f 460 Gene3D G3DSA:3.40.50.620 1 305 7.5E-135 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_1221 d05f0cafa8c18efa5e361b36b4f3a8e2 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_1221 d05f0cafa8c18efa5e361b36b4f3a8e2 325 Gene3D G3DSA:3.10.290.10 2 76 9.5E-25 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XDD1_1221 d05f0cafa8c18efa5e361b36b4f3a8e2 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 312 3.2E-106 T 15-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_1221 d05f0cafa8c18efa5e361b36b4f3a8e2 325 SUPERFAMILY SSF55174 17 69 2.52E-11 T 15-10-2018 XDD1_1221 d05f0cafa8c18efa5e361b36b4f3a8e2 325 Pfam PF00849 RNA pseudouridylate synthase 92 242 5.2E-31 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_1221 d05f0cafa8c18efa5e361b36b4f3a8e2 325 Gene3D G3DSA:3.30.2350.10 84 316 6.5E-72 T 15-10-2018 XDD1_1221 d05f0cafa8c18efa5e361b36b4f3a8e2 325 SUPERFAMILY SSF55120 77 322 1.4E-79 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_1221 d05f0cafa8c18efa5e361b36b4f3a8e2 325 SMART SM00363 18 83 4.8E-12 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_1221 d05f0cafa8c18efa5e361b36b4f3a8e2 325 Pfam PF01479 S4 domain 18 65 3.4E-11 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_3346 25f9874e49692645c87b3c39aad40ec0 365 Gene3D G3DSA:3.30.70.2810 1 79 3.2E-36 T 15-10-2018 XDD1_3346 25f9874e49692645c87b3c39aad40ec0 365 SUPERFAMILY SSF53335 184 331 4.61E-13 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_3346 25f9874e49692645c87b3c39aad40ec0 365 PIRSF PIRSF028774 1 359 1.4E-189 T 15-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 XDD1_3346 25f9874e49692645c87b3c39aad40ec0 365 Gene3D G3DSA:3.30.2300.20 80 175 1.6E-39 T 15-10-2018 XDD1_3346 25f9874e49692645c87b3c39aad40ec0 365 Gene3D G3DSA:3.40.50.150 176 357 2.6E-58 T 15-10-2018 XDD1_3346 25f9874e49692645c87b3c39aad40ec0 365 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 355 85.713 T 15-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 XDD1_3346 25f9874e49692645c87b3c39aad40ec0 365 Pfam PF01728 FtsJ-like methyltransferase 186 260 2.5E-7 T 15-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 XDD1_2138 345f5c82e2a02c750bff4d88935cb214 205 Pfam PF01810 LysE type translocator 14 198 1.4E-28 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 XDD1_2138 345f5c82e2a02c750bff4d88935cb214 205 PIRSF PIRSF006324 1 200 4.9E-43 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 XDD1_2240 2e1dd998f9871b6fc6368670ec51f2f8 447 SUPERFAMILY SSF52413 309 435 1.03E-39 T 15-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 XDD1_2240 2e1dd998f9871b6fc6368670ec51f2f8 447 SUPERFAMILY SSF51735 1 195 7.48E-57 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2240 2e1dd998f9871b6fc6368670ec51f2f8 447 Gene3D G3DSA:1.20.5.100 203 233 6.3E-18 T 15-10-2018 XDD1_2240 2e1dd998f9871b6fc6368670ec51f2f8 447 Gene3D G3DSA:3.40.50.720 1 202 3.1E-79 T 15-10-2018 XDD1_2240 2e1dd998f9871b6fc6368670ec51f2f8 447 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 7.6E-39 T 15-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XDD1_2240 2e1dd998f9871b6fc6368670ec51f2f8 447 SMART SM00984 320 424 9.9E-51 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XDD1_2240 2e1dd998f9871b6fc6368670ec51f2f8 447 Gene3D G3DSA:3.40.50.720 235 446 2.3E-77 T 15-10-2018 XDD1_2240 2e1dd998f9871b6fc6368670ec51f2f8 447 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 424 2.1E-30 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XDD1_2240 2e1dd998f9871b6fc6368670ec51f2f8 447 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 1.4E-139 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 XDD1_2240 2e1dd998f9871b6fc6368670ec51f2f8 447 PIRSF PIRSF000124 1 439 4.1E-152 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 XDD1_2240 2e1dd998f9871b6fc6368670ec51f2f8 447 PIRSF PIRSF500134 1 442 1.6E-192 T 15-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 XDD1_2240 2e1dd998f9871b6fc6368670ec51f2f8 447 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 1.3E-64 T 15-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XDD1_2240 2e1dd998f9871b6fc6368670ec51f2f8 447 SUPERFAMILY SSF48179 203 300 5.89E-34 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XDD1_0048 d32f2527035fb4f65e245922091b7313 516 Gene3D G3DSA:1.20.58.1510 283 494 9.3E-49 T 15-10-2018 XDD1_0048 d32f2527035fb4f65e245922091b7313 516 SMART SM00382 34 183 7.2E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0048 d32f2527035fb4f65e245922091b7313 516 Pfam PF07728 AAA domain (dynein-related subfamily) 37 167 1.4E-25 T 15-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 XDD1_0048 d32f2527035fb4f65e245922091b7313 516 SUPERFAMILY SSF52540 7 274 3.0E-18 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0048 d32f2527035fb4f65e245922091b7313 516 Gene3D G3DSA:3.40.50.300 1 217 3.9E-62 T 15-10-2018 XDD1_0048 d32f2527035fb4f65e245922091b7313 516 Pfam PF12592 Protein of unknown function (DUF3763) 444 496 1.8E-21 T 15-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 XDD1_0048 d32f2527035fb4f65e245922091b7313 516 Gene3D G3DSA:2.40.128.430 327 434 9.3E-49 T 15-10-2018 XDD1_0048 d32f2527035fb4f65e245922091b7313 516 Gene3D G3DSA:1.10.8.300 218 281 1.1E-23 T 15-10-2018 XDD1_0769 4dade939cad8b4122e3f25423ba8e3d6 548 Gene3D G3DSA:3.50.50.60 5 531 2.2E-145 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0769 4dade939cad8b4122e3f25423ba8e3d6 548 PIRSF PIRSF000137 1 359 7.6E-77 T 15-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 XDD1_0769 4dade939cad8b4122e3f25423ba8e3d6 548 PIRSF PIRSF000137 370 544 1.1E-25 T 15-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 XDD1_0769 4dade939cad8b4122e3f25423ba8e3d6 548 Gene3D G3DSA:3.30.410.40 173 473 2.2E-145 T 15-10-2018 XDD1_0769 4dade939cad8b4122e3f25423ba8e3d6 548 SUPERFAMILY SSF51905 1 538 4.81E-71 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0769 4dade939cad8b4122e3f25423ba8e3d6 548 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 105 128 - T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 XDD1_0769 4dade939cad8b4122e3f25423ba8e3d6 548 Pfam PF05199 GMC oxidoreductase 392 531 8.0E-27 T 15-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 XDD1_0769 4dade939cad8b4122e3f25423ba8e3d6 548 SUPERFAMILY SSF54373 382 479 1.08E-12 T 15-10-2018 XDD1_0769 4dade939cad8b4122e3f25423ba8e3d6 548 Pfam PF00732 GMC oxidoreductase 87 321 8.2E-54 T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 XDD1_0769 4dade939cad8b4122e3f25423ba8e3d6 548 Pfam PF00732 GMC oxidoreductase 5 70 1.8E-10 T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 XDD1_0052 b2b817d4e4d7cc01eeb89842363b4484 309 SUPERFAMILY SSF53613 3 305 1.71E-84 T 15-10-2018 IPR029056 Ribokinase-like XDD1_0052 b2b817d4e4d7cc01eeb89842363b4484 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 XDD1_0052 b2b817d4e4d7cc01eeb89842363b4484 309 Gene3D G3DSA:3.40.1190.20 1 309 4.0E-102 T 15-10-2018 IPR029056 Ribokinase-like XDD1_0052 b2b817d4e4d7cc01eeb89842363b4484 309 Pfam PF00294 pfkB family carbohydrate kinase 3 297 7.0E-76 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB XDD1_0052 b2b817d4e4d7cc01eeb89842363b4484 309 Hamap MF_01987 Ribokinase [rbsK]. 4 304 26.098 T 15-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 XDD1_0052 b2b817d4e4d7cc01eeb89842363b4484 309 PRINTS PR00990 Ribokinase signature 175 190 7.6E-37 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 XDD1_0052 b2b817d4e4d7cc01eeb89842363b4484 309 PRINTS PR00990 Ribokinase signature 35 54 7.6E-37 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 XDD1_0052 b2b817d4e4d7cc01eeb89842363b4484 309 PRINTS PR00990 Ribokinase signature 107 120 7.6E-37 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 XDD1_0052 b2b817d4e4d7cc01eeb89842363b4484 309 PRINTS PR00990 Ribokinase signature 8 29 7.6E-37 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 XDD1_0052 b2b817d4e4d7cc01eeb89842363b4484 309 PRINTS PR00990 Ribokinase signature 219 230 7.6E-37 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 XDD1_0052 b2b817d4e4d7cc01eeb89842363b4484 309 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 7 302 2.4E-111 T 15-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 XDD1_3334 6fb54db67431ee17b801883bfcd2a809 140 Gene3D G3DSA:3.40.640.10 66 123 3.4E-15 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_3334 6fb54db67431ee17b801883bfcd2a809 140 Gene3D G3DSA:3.90.1150.10 47 65 3.4E-15 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_3334 6fb54db67431ee17b801883bfcd2a809 140 SUPERFAMILY SSF53383 36 121 2.71E-12 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_2774 acb8dddd0c398b707477a873ade914a2 142 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.7E-56 T 15-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XDD1_2774 acb8dddd0c398b707477a873ade914a2 142 Gene3D G3DSA:3.30.70.141 2 141 2.4E-59 T 15-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XDD1_2774 acb8dddd0c398b707477a873ade914a2 142 SUPERFAMILY SSF54919 1 140 5.11E-60 T 15-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XDD1_2774 acb8dddd0c398b707477a873ade914a2 142 SMART SM00562 3 140 5.0E-88 T 15-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XDD1_2774 acb8dddd0c398b707477a873ade914a2 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.891 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XDD1_2774 acb8dddd0c398b707477a873ade914a2 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 8.0E-40 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XDD1_2774 acb8dddd0c398b707477a873ade914a2 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 8.0E-40 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XDD1_2774 acb8dddd0c398b707477a873ade914a2 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 8.0E-40 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XDD1_2774 acb8dddd0c398b707477a873ade914a2 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 8.0E-40 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XDD1_2774 acb8dddd0c398b707477a873ade914a2 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 8.0E-40 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XDD1_2774 acb8dddd0c398b707477a873ade914a2 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 15-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XDD1_3896 734eeb0d1b78376a034face600ead763 497 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XDD1_3896 734eeb0d1b78376a034face600ead763 497 Pfam PF01266 FAD dependent oxidoreductase 5 323 1.4E-48 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 XDD1_3896 734eeb0d1b78376a034face600ead763 497 Gene3D G3DSA:3.50.50.60 5 366 1.5E-146 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_3896 734eeb0d1b78376a034face600ead763 497 SUPERFAMILY SSF51905 1 374 9.98E-37 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_3896 734eeb0d1b78376a034face600ead763 497 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 489 9.3E-12 T 15-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XDD1_3896 734eeb0d1b78376a034face600ead763 497 Gene3D G3DSA:1.10.8.870 393 462 3.7E-24 T 15-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XDD1_3896 734eeb0d1b78376a034face600ead763 497 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 2.6E-28 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XDD1_3896 734eeb0d1b78376a034face600ead763 497 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 2.6E-28 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XDD1_3896 734eeb0d1b78376a034face600ead763 497 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 2.6E-28 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XDD1_3896 734eeb0d1b78376a034face600ead763 497 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 2.6E-28 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XDD1_3896 734eeb0d1b78376a034face600ead763 497 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 2.6E-28 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XDD1_3896 734eeb0d1b78376a034face600ead763 497 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 2.6E-28 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XDD1_3896 734eeb0d1b78376a034face600ead763 497 SUPERFAMILY SSF54373 226 319 2.94E-7 T 15-10-2018 XDD1_3896 734eeb0d1b78376a034face600ead763 497 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XDD1_3896 734eeb0d1b78376a034face600ead763 497 Gene3D G3DSA:3.30.9.10 82 320 1.5E-146 T 15-10-2018 XDD1_0950 c41b676329bc51655fb8343792e2210d 142 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 134 9.475 T 15-10-2018 IPR022907 VapC family GO:0004540 XDD1_0950 c41b676329bc51655fb8343792e2210d 142 Pfam PF01850 PIN domain 3 123 4.2E-13 T 15-10-2018 IPR002716 PIN domain XDD1_0950 c41b676329bc51655fb8343792e2210d 142 SUPERFAMILY SSF88723 2 138 6.73E-29 T 15-10-2018 IPR029060 PIN-like domain superfamily XDD1_0950 c41b676329bc51655fb8343792e2210d 142 Gene3D G3DSA:3.40.50.1010 2 140 1.0E-39 T 15-10-2018 XDD1_2378 50dc50c3bc04c8452630219c682b9ead 116 SUPERFAMILY SSF63592 1 98 2.62E-38 T 15-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily XDD1_2378 50dc50c3bc04c8452630219c682b9ead 116 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 29.16 T 15-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 XDD1_2378 50dc50c3bc04c8452630219c682b9ead 116 Gene3D G3DSA:1.10.4000.10 1 116 7.5E-49 T 15-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily XDD1_2378 50dc50c3bc04c8452630219c682b9ead 116 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 9 98 6.0E-47 T 15-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 XDD1_2378 50dc50c3bc04c8452630219c682b9ead 116 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 99 1.0E-41 T 15-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 XDD1_0899 1846e4703b21ced072b998f0e467f817 232 SUPERFAMILY SSF48498 105 220 3.76E-13 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily XDD1_0899 1846e4703b21ced072b998f0e467f817 232 Gene3D G3DSA:1.10.357.10 16 232 1.4E-67 T 15-10-2018 XDD1_0899 1846e4703b21ced072b998f0e467f817 232 Pfam PF00440 Bacterial regulatory proteins, tetR family 33 76 7.7E-19 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_0899 1846e4703b21ced072b998f0e467f817 232 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 46 7.0E-13 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_0899 1846e4703b21ced072b998f0e467f817 232 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 54 77 7.0E-13 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_0899 1846e4703b21ced072b998f0e467f817 232 ProSitePatterns PS01081 TetR-type HTH domain signature. 45 76 - T 15-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site XDD1_0899 1846e4703b21ced072b998f0e467f817 232 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 101 221 1.2E-39 T 15-10-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 XDD1_0899 1846e4703b21ced072b998f0e467f817 232 SUPERFAMILY SSF46689 18 87 5.99E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1008 2661a86e3d7ae6b4fbe39d6b1239bc9e 347 Pfam PF13358 DDE superfamily endonuclease 177 310 4.9E-30 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_1008 2661a86e3d7ae6b4fbe39d6b1239bc9e 347 SUPERFAMILY SSF46689 24 140 1.24E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1008 2661a86e3d7ae6b4fbe39d6b1239bc9e 347 Gene3D G3DSA:3.30.420.470 151 336 4.9E-13 T 15-10-2018 XDD1_1008 2661a86e3d7ae6b4fbe39d6b1239bc9e 347 Pfam PF13384 Homeodomain-like domain 28 72 3.8E-9 T 15-10-2018 XDD1_1008 2661a86e3d7ae6b4fbe39d6b1239bc9e 347 SUPERFAMILY SSF53098 207 310 9.1E-8 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3480 24ecfdfed9368d8c91385f991bcc53d3 198 Gene3D G3DSA:3.40.630.30 4 192 6.0E-40 T 15-10-2018 XDD1_3480 24ecfdfed9368d8c91385f991bcc53d3 198 SUPERFAMILY SSF55729 7 179 2.78E-36 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_3480 24ecfdfed9368d8c91385f991bcc53d3 198 Pfam PF13302 Acetyltransferase (GNAT) domain 15 154 5.8E-14 T 15-10-2018 IPR000182 GNAT domain XDD1_3768 b259e8695e433b99f15bdcc82b05286d 1458 Pfam PF05860 haemagglutination activity domain 35 167 1.6E-28 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal XDD1_3768 b259e8695e433b99f15bdcc82b05286d 1458 Gene3D G3DSA:2.160.20.10 36 324 6.2E-81 T 15-10-2018 IPR012334 Pectin lyase fold XDD1_3768 b259e8695e433b99f15bdcc82b05286d 1458 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 67 159 7.6E-16 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal XDD1_3768 b259e8695e433b99f15bdcc82b05286d 1458 SUPERFAMILY SSF51126 40 315 2.13E-58 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor XDD1_3768 b259e8695e433b99f15bdcc82b05286d 1458 SMART SM00912 49 169 1.6E-42 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal XDD1_3768 b259e8695e433b99f15bdcc82b05286d 1458 Pfam PF13332 Haemagluttinin repeat 1026 1187 3.5E-26 T 15-10-2018 IPR025157 Hemagglutinin repeat XDD1_3768 b259e8695e433b99f15bdcc82b05286d 1458 Pfam PF13332 Haemagluttinin repeat 481 535 5.0E-5 T 15-10-2018 IPR025157 Hemagglutinin repeat XDD1_3768 b259e8695e433b99f15bdcc82b05286d 1458 Pfam PF13332 Haemagluttinin repeat 1224 1293 3.2E-12 T 15-10-2018 IPR025157 Hemagglutinin repeat XDD1_3768 b259e8695e433b99f15bdcc82b05286d 1458 Pfam PF13332 Haemagluttinin repeat 635 783 4.6E-10 T 15-10-2018 IPR025157 Hemagglutinin repeat XDD1_3768 b259e8695e433b99f15bdcc82b05286d 1458 Pfam PF13332 Haemagluttinin repeat 557 622 3.1E-4 T 15-10-2018 IPR025157 Hemagglutinin repeat XDD1_3768 b259e8695e433b99f15bdcc82b05286d 1458 Pfam PF13332 Haemagluttinin repeat 405 479 2.7E-4 T 15-10-2018 IPR025157 Hemagglutinin repeat XDD1_3607 fe8010d8d76fe17e74086e758cae09c1 532 SUPERFAMILY SSF52335 7 197 1.16E-71 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily XDD1_3607 fe8010d8d76fe17e74086e758cae09c1 532 Gene3D G3DSA:3.40.50.1380 4 197 3.6E-88 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily XDD1_3607 fe8010d8d76fe17e74086e758cae09c1 532 SUPERFAMILY SSF53927 221 532 1.3E-128 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 XDD1_3607 fe8010d8d76fe17e74086e758cae09c1 532 PIRSF PIRSF000414 1 532 9.7E-228 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XDD1_3607 fe8010d8d76fe17e74086e758cae09c1 532 SMART SM00798 137 464 5.1E-208 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XDD1_3607 fe8010d8d76fe17e74086e758cae09c1 532 Gene3D G3DSA:3.40.140.20 395 532 1.7E-59 T 15-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XDD1_3607 fe8010d8d76fe17e74086e758cae09c1 532 SMART SM00851 19 132 3.4E-62 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain XDD1_3607 fe8010d8d76fe17e74086e758cae09c1 532 Gene3D G3DSA:3.40.140.20 218 375 2.3E-56 T 15-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XDD1_3607 fe8010d8d76fe17e74086e758cae09c1 532 Pfam PF02142 MGS-like domain 19 132 4.9E-31 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain XDD1_3607 fe8010d8d76fe17e74086e758cae09c1 532 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 532 45.11 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XDD1_3607 fe8010d8d76fe17e74086e758cae09c1 532 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 532 4.4E-256 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XDD1_3607 fe8010d8d76fe17e74086e758cae09c1 532 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 463 5.8E-118 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XDD1_3096 c4d38034c77025fe61746a1417f40768 64 Pfam PF17284 Spermidine synthase tetramerisation domain 6 57 4.6E-20 T 15-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XDD1_3096 c4d38034c77025fe61746a1417f40768 64 SUPERFAMILY SSF53335 6 64 2.14E-13 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_3096 c4d38034c77025fe61746a1417f40768 64 Gene3D G3DSA:2.30.140.10 1 54 7.3E-28 T 15-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XDD1_2318 e2111c8a9a5838e504f8fefa52a5020f 335 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 321 1.8E-14 T 15-10-2018 IPR001543 Surface presentation of antigen (SpoA) XDD1_2318 e2111c8a9a5838e504f8fefa52a5020f 335 Gene3D G3DSA:3.40.1550.10 44 233 4.3E-56 T 15-10-2018 IPR028976 CheC-like superfamily XDD1_2318 e2111c8a9a5838e504f8fefa52a5020f 335 SUPERFAMILY SSF101801 250 323 8.63E-12 T 15-10-2018 IPR036429 SpoA-like superfamily XDD1_2318 e2111c8a9a5838e504f8fefa52a5020f 335 PIRSF PIRSF002888 2 330 4.1E-97 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 XDD1_2318 e2111c8a9a5838e504f8fefa52a5020f 335 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 321 4.5E-111 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 XDD1_2318 e2111c8a9a5838e504f8fefa52a5020f 335 SUPERFAMILY SSF103039 50 231 1.99E-19 T 15-10-2018 IPR028976 CheC-like superfamily XDD1_2318 e2111c8a9a5838e504f8fefa52a5020f 335 Pfam PF02154 Flagellar motor switch protein FliM 38 231 7.5E-76 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 XDD1_2318 e2111c8a9a5838e504f8fefa52a5020f 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 213 231 3.9E-29 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 XDD1_2318 e2111c8a9a5838e504f8fefa52a5020f 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 3.9E-29 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 XDD1_2318 e2111c8a9a5838e504f8fefa52a5020f 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 3.9E-29 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 XDD1_2318 e2111c8a9a5838e504f8fefa52a5020f 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 3.9E-29 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 XDD1_2458 3d32f3f224de672b0b0eefa52a08055c 243 SUPERFAMILY SSF52172 8 144 3.42E-40 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_2458 3d32f3f224de672b0b0eefa52a08055c 243 SMART SM00862 159 235 2.6E-23 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XDD1_2458 3d32f3f224de672b0b0eefa52a08055c 243 SMART SM00448 16 126 1.9E-40 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_2458 3d32f3f224de672b0b0eefa52a08055c 243 Gene3D G3DSA:3.40.50.2300 2 138 8.3E-35 T 15-10-2018 XDD1_2458 3d32f3f224de672b0b0eefa52a08055c 243 Pfam PF00072 Response regulator receiver domain 18 127 3.5E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_2458 3d32f3f224de672b0b0eefa52a08055c 243 SUPERFAMILY SSF46894 143 237 1.28E-25 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XDD1_2458 3d32f3f224de672b0b0eefa52a08055c 243 Gene3D G3DSA:1.10.10.10 145 242 8.7E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2458 3d32f3f224de672b0b0eefa52a08055c 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 234 3.6E-22 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XDD1_1517 7d276ad8c8c1e3fac3ee45cf34947dbc 526 SUPERFAMILY SSF56176 438 521 4.09E-21 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XDD1_1517 7d276ad8c8c1e3fac3ee45cf34947dbc 526 Gene3D G3DSA:3.10.580.10 284 435 2.2E-39 T 15-10-2018 XDD1_1517 7d276ad8c8c1e3fac3ee45cf34947dbc 526 Gene3D G3DSA:3.30.465.10 436 519 1.1E-19 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 XDD1_1517 7d276ad8c8c1e3fac3ee45cf34947dbc 526 Pfam PF03741 Integral membrane protein TerC family 15 203 3.0E-51 T 15-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 XDD1_1517 7d276ad8c8c1e3fac3ee45cf34947dbc 526 Pfam PF00571 CBS domain 375 422 1.0E-6 T 15-10-2018 IPR000644 CBS domain XDD1_1517 7d276ad8c8c1e3fac3ee45cf34947dbc 526 Pfam PF00571 CBS domain 303 359 8.5E-4 T 15-10-2018 IPR000644 CBS domain XDD1_1517 7d276ad8c8c1e3fac3ee45cf34947dbc 526 Pfam PF03471 Transporter associated domain 442 517 6.6E-19 T 15-10-2018 IPR005170 Transporter-associated domain XDD1_1517 7d276ad8c8c1e3fac3ee45cf34947dbc 526 SMART SM01091 440 519 6.9E-24 T 15-10-2018 IPR005170 Transporter-associated domain XDD1_1517 7d276ad8c8c1e3fac3ee45cf34947dbc 526 SUPERFAMILY SSF54631 290 425 7.96E-26 T 15-10-2018 XDD1_0607 2cdc3368802eddf8900a40bd2a4526ab 185 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 11 171 1.6E-64 T 15-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 XDD1_0607 2cdc3368802eddf8900a40bd2a4526ab 185 Gene3D G3DSA:3.40.50.300 2 174 1.5E-59 T 15-10-2018 XDD1_0607 2cdc3368802eddf8900a40bd2a4526ab 185 SUPERFAMILY SSF52540 6 172 3.45E-24 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0607 2cdc3368802eddf8900a40bd2a4526ab 185 Pfam PF01202 Shikimate kinase 17 170 5.3E-10 T 15-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 XDD1_1356 44ad2581fc503a05e44581425349b57b 258 Pfam PF13432 Tetratricopeptide repeat 146 207 2.1E-5 T 15-10-2018 XDD1_1356 44ad2581fc503a05e44581425349b57b 258 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 139 255 5.3E-41 T 15-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal XDD1_1356 44ad2581fc503a05e44581425349b57b 258 SUPERFAMILY SSF48452 148 248 6.33E-12 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_1356 44ad2581fc503a05e44581425349b57b 258 Pfam PF16331 TolA binding protein trimerisation 37 111 8.9E-25 T 15-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 XDD1_1356 44ad2581fc503a05e44581425349b57b 258 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 6 258 19.535 T 15-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 XDD1_1356 44ad2581fc503a05e44581425349b57b 258 Gene3D G3DSA:1.25.40.10 137 258 4.4E-27 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_1356 44ad2581fc503a05e44581425349b57b 258 Pfam PF13174 Tetratricopeptide repeat 213 245 4.2E-6 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XDD1_1356 44ad2581fc503a05e44581425349b57b 258 Gene3D G3DSA:1.20.5.110 35 117 3.4E-30 T 15-10-2018 XDD1_1531 60876848ae2e67ee5ed2ceafb8c0f21f 206 SUPERFAMILY SSF47616 79 201 3.0E-32 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily XDD1_1531 60876848ae2e67ee5ed2ceafb8c0f21f 206 Gene3D G3DSA:3.40.30.10 1 83 4.8E-33 T 15-10-2018 XDD1_1531 60876848ae2e67ee5ed2ceafb8c0f21f 206 Gene3D G3DSA:1.20.1050.10 84 201 2.2E-39 T 15-10-2018 XDD1_1531 60876848ae2e67ee5ed2ceafb8c0f21f 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 115 195 2.2E-10 T 15-10-2018 IPR004046 Glutathione S-transferase, C-terminal XDD1_1531 60876848ae2e67ee5ed2ceafb8c0f21f 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 5.8E-15 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 XDD1_1531 60876848ae2e67ee5ed2ceafb8c0f21f 206 SUPERFAMILY SSF52833 1 85 1.95E-24 T 15-10-2018 IPR036249 Thioredoxin-like superfamily XDD1_3562 a63cdce3c0a3cb4e4b4c5cd87ebca424 327 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.089 T 15-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 XDD1_3562 a63cdce3c0a3cb4e4b4c5cd87ebca424 327 Gene3D G3DSA:3.20.20.70 7 248 4.6E-76 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_3562 a63cdce3c0a3cb4e4b4c5cd87ebca424 327 PIRSF PIRSF006621 1 327 2.3E-102 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 XDD1_3562 a63cdce3c0a3cb4e4b4c5cd87ebca424 327 Gene3D G3DSA:1.10.1200.80 253 326 1.2E-10 T 15-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 XDD1_3562 a63cdce3c0a3cb4e4b4c5cd87ebca424 327 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 1.2E-137 T 15-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 XDD1_3562 a63cdce3c0a3cb4e4b4c5cd87ebca424 327 SUPERFAMILY SSF51395 11 319 8.61E-89 T 15-10-2018 XDD1_3562 a63cdce3c0a3cb4e4b4c5cd87ebca424 327 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 1.8E-114 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 XDD1_3562 a63cdce3c0a3cb4e4b4c5cd87ebca424 327 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 15-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 XDD1_2929 4ce187ce89f505f24994332e4c94ae62 271 Pfam PF12833 Helix-turn-helix domain 191 267 1.2E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_2929 4ce187ce89f505f24994332e4c94ae62 271 SUPERFAMILY SSF46689 221 268 1.66E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2929 4ce187ce89f505f24994332e4c94ae62 271 Gene3D G3DSA:1.10.10.60 163 270 8.5E-28 T 15-10-2018 XDD1_2929 4ce187ce89f505f24994332e4c94ae62 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 263 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 XDD1_2929 4ce187ce89f505f24994332e4c94ae62 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 2.7E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 XDD1_2929 4ce187ce89f505f24994332e4c94ae62 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 2.7E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 XDD1_2929 4ce187ce89f505f24994332e4c94ae62 271 SUPERFAMILY SSF46689 167 217 2.45E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2929 4ce187ce89f505f24994332e4c94ae62 271 SMART SM00342 184 267 2.6E-28 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_3207 afeff45a02d0f32c80016dea44717ddf 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 49 67 2.9E-5 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 XDD1_3207 afeff45a02d0f32c80016dea44717ddf 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 35 49 2.9E-5 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 XDD1_3207 afeff45a02d0f32c80016dea44717ddf 266 SMART SM01134 84 245 2.9E-66 T 15-10-2018 XDD1_3207 afeff45a02d0f32c80016dea44717ddf 266 SUPERFAMILY SSF46785 16 67 3.56E-11 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3207 afeff45a02d0f32c80016dea44717ddf 266 ProSitePatterns PS00894 DeoR-type HTH domain signature. 17 51 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 XDD1_3207 afeff45a02d0f32c80016dea44717ddf 266 Pfam PF00455 DeoR C terminal sensor domain 86 243 1.2E-49 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain XDD1_3207 afeff45a02d0f32c80016dea44717ddf 266 SMART SM00420 17 69 2.8E-12 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 XDD1_3207 afeff45a02d0f32c80016dea44717ddf 266 Gene3D G3DSA:1.10.10.10 6 70 6.0E-7 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3207 afeff45a02d0f32c80016dea44717ddf 266 SUPERFAMILY SSF100950 85 245 2.83E-30 T 15-10-2018 IPR037171 NagB/RpiA transferase-like XDD1_3207 afeff45a02d0f32c80016dea44717ddf 266 Pfam PF08220 DeoR-like helix-turn-helix domain 17 71 1.7E-12 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 XDD1_1565 cd88311a96681ec45b167e6b19d3ecaf 246 Pfam PF04055 Radical SAM superfamily 26 178 1.9E-31 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XDD1_1565 cd88311a96681ec45b167e6b19d3ecaf 246 PIRSF PIRSF000371 2 47 3.5E-10 T 15-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 XDD1_1565 cd88311a96681ec45b167e6b19d3ecaf 246 PIRSF PIRSF000371 44 246 9.1E-47 T 15-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 XDD1_1565 cd88311a96681ec45b167e6b19d3ecaf 246 Gene3D G3DSA:3.20.20.70 2 246 7.1E-105 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_1565 cd88311a96681ec45b167e6b19d3ecaf 246 SUPERFAMILY SSF102114 23 221 4.32E-25 T 15-10-2018 XDD1_1565 cd88311a96681ec45b167e6b19d3ecaf 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 15-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 XDD1_1565 cd88311a96681ec45b167e6b19d3ecaf 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 238 1.9E-107 T 15-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 XDD1_1565 cd88311a96681ec45b167e6b19d3ecaf 246 Pfam PF13353 4Fe-4S single cluster domain 16 125 3.8E-17 T 15-10-2018 XDD1_1646 051e7f25f77b0b9ae60d0adaa0aea955 112 Pfam PF01844 HNH endonuclease 32 80 3.0E-7 T 15-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 XDD1_2377 6afc9c699e25ac58195af00ada0197d4 193 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 193 4.0E-104 T 15-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 XDD1_2377 6afc9c699e25ac58195af00ada0197d4 193 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 173 6.3E-85 T 15-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 XDD1_2377 6afc9c699e25ac58195af00ada0197d4 193 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 187 46.97 T 15-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 XDD1_2377 6afc9c699e25ac58195af00ada0197d4 193 PIRSF PIRSF003159 1 182 1.3E-91 T 15-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 XDD1_2377 6afc9c699e25ac58195af00ada0197d4 193 SUPERFAMILY SSF160930 5 161 4.58E-67 T 15-10-2018 XDD1_0087 c5727fad9dc12e209258523303a444e5 400 Gene3D G3DSA:1.20.1250.20 203 396 9.7E-14 T 15-10-2018 XDD1_0087 c5727fad9dc12e209258523303a444e5 400 Gene3D G3DSA:1.20.1250.20 8 199 7.0E-20 T 15-10-2018 XDD1_0087 c5727fad9dc12e209258523303a444e5 400 SUPERFAMILY SSF103473 5 389 1.07E-48 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0087 c5727fad9dc12e209258523303a444e5 400 Pfam PF07690 Major Facilitator Superfamily 18 334 1.2E-28 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_1320 1a8aedb90bc4ef9000d5efd9cf8b5984 245 Pfam PF13649 Methyltransferase domain 43 138 9.2E-20 T 15-10-2018 XDD1_1320 1a8aedb90bc4ef9000d5efd9cf8b5984 245 Gene3D G3DSA:3.40.50.150 24 234 3.4E-39 T 15-10-2018 XDD1_1320 1a8aedb90bc4ef9000d5efd9cf8b5984 245 SUPERFAMILY SSF53335 6 218 2.71E-39 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_1191 e257a86b3dc4058f2b3e8774d696b0d6 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 3 128 30.809 T 15-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 XDD1_1191 e257a86b3dc4058f2b3e8774d696b0d6 133 Pfam PF07417 Transcriptional regulator Crl 6 122 4.5E-50 T 15-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 XDD1_1191 e257a86b3dc4058f2b3e8774d696b0d6 133 Gene3D G3DSA:3.30.310.230 1 133 2.8E-53 T 15-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 XDD1_2482 ffaaad9d12b8e8239d43dd4f9f5543b8 373 SUPERFAMILY SSF51197 6 292 9.2E-71 T 15-10-2018 XDD1_2482 ffaaad9d12b8e8239d43dd4f9f5543b8 373 Gene3D G3DSA:1.10.10.2510 205 373 1.9E-61 T 15-10-2018 XDD1_2482 ffaaad9d12b8e8239d43dd4f9f5543b8 373 Gene3D G3DSA:2.60.120.650 2 204 2.7E-84 T 15-10-2018 XDD1_2482 ffaaad9d12b8e8239d43dd4f9f5543b8 373 SMART SM00558 87 215 5.1E-8 T 15-10-2018 IPR003347 JmjC domain XDD1_2482 ffaaad9d12b8e8239d43dd4f9f5543b8 373 Pfam PF08007 Cupin superfamily protein 9 310 4.7E-103 T 15-10-2018 IPR003347 JmjC domain XDD1_1336 cbd21de2525e083e1c34ba2343797b56 427 Gene3D G3DSA:1.10.230.10 268 376 8.0E-152 T 15-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain XDD1_1336 cbd21de2525e083e1c34ba2343797b56 427 Pfam PF00285 Citrate synthase, C-terminal domain 46 410 2.3E-132 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 XDD1_1336 cbd21de2525e083e1c34ba2343797b56 427 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 421 1.7E-236 T 15-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 XDD1_1336 cbd21de2525e083e1c34ba2343797b56 427 PIRSF PIRSF001369 38 427 5.8E-174 T 15-10-2018 IPR024176 Citrate synthase, bacterial-type XDD1_1336 cbd21de2525e083e1c34ba2343797b56 427 PRINTS PR00143 Citrate synthase signature 219 234 3.4E-56 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 XDD1_1336 cbd21de2525e083e1c34ba2343797b56 427 PRINTS PR00143 Citrate synthase signature 359 375 3.4E-56 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 XDD1_1336 cbd21de2525e083e1c34ba2343797b56 427 PRINTS PR00143 Citrate synthase signature 379 393 3.4E-56 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 XDD1_1336 cbd21de2525e083e1c34ba2343797b56 427 PRINTS PR00143 Citrate synthase signature 241 269 3.4E-56 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 XDD1_1336 cbd21de2525e083e1c34ba2343797b56 427 PRINTS PR00143 Citrate synthase signature 165 178 3.4E-56 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 XDD1_1336 cbd21de2525e083e1c34ba2343797b56 427 PRINTS PR00143 Citrate synthase signature 296 316 3.4E-56 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 XDD1_1336 cbd21de2525e083e1c34ba2343797b56 427 SUPERFAMILY SSF48256 4 423 2.88E-167 T 15-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 XDD1_1336 cbd21de2525e083e1c34ba2343797b56 427 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 15-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 XDD1_1336 cbd21de2525e083e1c34ba2343797b56 427 Gene3D G3DSA:1.10.580.10 57 410 8.0E-152 T 15-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 XDD1_1336 cbd21de2525e083e1c34ba2343797b56 427 Gene3D G3DSA:2.20.28.60 1 50 3.8E-21 T 15-10-2018 XDD1_2231 4f4a68544751229fd2bdc6e69789f7df 332 SUPERFAMILY SSF52540 43 312 4.89E-69 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2231 4f4a68544751229fd2bdc6e69789f7df 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 306 2.1E-21 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 XDD1_2231 4f4a68544751229fd2bdc6e69789f7df 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 325 1.6E-24 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 XDD1_2231 4f4a68544751229fd2bdc6e69789f7df 332 SMART SM00382 42 248 2.6E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_2231 4f4a68544751229fd2bdc6e69789f7df 332 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_2231 4f4a68544751229fd2bdc6e69789f7df 332 Pfam PF00005 ABC transporter 34 190 5.4E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_2231 4f4a68544751229fd2bdc6e69789f7df 332 Gene3D G3DSA:3.40.50.300 10 331 2.8E-100 T 15-10-2018 XDD1_3229 70b2510b532353e6666c88b0c0729c56 188 SUPERFAMILY SSF158442 19 129 3.27E-19 T 15-10-2018 IPR023380 DsbB-like superfamily XDD1_3229 70b2510b532353e6666c88b0c0729c56 188 Gene3D G3DSA:1.20.1550.10 2 170 2.0E-6 T 15-10-2018 IPR023380 DsbB-like superfamily XDD1_3229 70b2510b532353e6666c88b0c0729c56 188 Pfam PF02600 Disulfide bond formation protein DsbB 17 99 6.7E-9 T 15-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 XDD1_1043 a82d7a72db6e0e51f75e46db97cc45c1 276 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 18 264 2.9E-99 T 15-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 XDD1_1043 a82d7a72db6e0e51f75e46db97cc45c1 276 Pfam PF04962 KduI/IolB family 5 264 4.4E-110 T 15-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 XDD1_1043 a82d7a72db6e0e51f75e46db97cc45c1 276 Gene3D G3DSA:2.60.120.10 20 127 8.9E-88 T 15-10-2018 IPR014710 RmlC-like jelly roll fold XDD1_1043 a82d7a72db6e0e51f75e46db97cc45c1 276 SUPERFAMILY SSF51182 3 253 7.56E-69 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily XDD1_1043 a82d7a72db6e0e51f75e46db97cc45c1 276 PIRSF PIRSF036628 1 269 2.1E-108 T 15-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 XDD1_1043 a82d7a72db6e0e51f75e46db97cc45c1 276 Gene3D G3DSA:2.60.120.10 128 264 8.9E-88 T 15-10-2018 IPR014710 RmlC-like jelly roll fold XDD1_3608 a52313bde83c103f951a1220431717aa 432 SMART SM01209 103 296 8.0E-142 T 15-10-2018 XDD1_3608 a52313bde83c103f951a1220431717aa 432 Gene3D G3DSA:3.40.50.20 2 95 3.6E-38 T 15-10-2018 XDD1_3608 a52313bde83c103f951a1220431717aa 432 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 3.0E-35 T 15-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XDD1_3608 a52313bde83c103f951a1220431717aa 432 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 4.5E-84 T 15-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XDD1_3608 a52313bde83c103f951a1220431717aa 432 Gene3D G3DSA:3.30.470.20 191 329 9.0E-62 T 15-10-2018 XDD1_3608 a52313bde83c103f951a1220431717aa 432 SMART SM01210 330 428 9.4E-52 T 15-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XDD1_3608 a52313bde83c103f951a1220431717aa 432 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 15-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XDD1_3608 a52313bde83c103f951a1220431717aa 432 Gene3D G3DSA:3.30.1490.20 121 190 6.2E-28 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XDD1_3608 a52313bde83c103f951a1220431717aa 432 SUPERFAMILY SSF56059 104 319 1.63E-69 T 15-10-2018 XDD1_3608 a52313bde83c103f951a1220431717aa 432 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 428 43.857 T 15-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XDD1_3608 a52313bde83c103f951a1220431717aa 432 SUPERFAMILY SSF51246 329 429 2.28E-30 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 XDD1_3608 a52313bde83c103f951a1220431717aa 432 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 426 1.3E-29 T 15-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XDD1_3608 a52313bde83c103f951a1220431717aa 432 Gene3D G3DSA:3.90.600.10 330 432 5.7E-33 T 15-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XDD1_3608 a52313bde83c103f951a1220431717aa 432 SUPERFAMILY SSF52440 1 103 4.03E-37 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XDD1_3608 a52313bde83c103f951a1220431717aa 432 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 428 9.3E-182 T 15-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XDD1_1782 64cac6daf5bab6f53d073efed746d70d 297 Pfam PF01522 Polysaccharide deacetylase 15 170 2.8E-13 T 15-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 XDD1_1782 64cac6daf5bab6f53d073efed746d70d 297 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 296 64.695 T 15-10-2018 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 XDD1_1782 64cac6daf5bab6f53d073efed746d70d 297 SUPERFAMILY SSF88713 14 275 1.25E-30 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 XDD1_1412 0ba6b914ff5dcd60b97f7b79dd95a394 226 SUPERFAMILY SSF46689 7 84 5.64E-18 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1412 0ba6b914ff5dcd60b97f7b79dd95a394 226 SUPERFAMILY SSF48498 95 223 3.2E-27 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily XDD1_1412 0ba6b914ff5dcd60b97f7b79dd95a394 226 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 3.2E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_1412 0ba6b914ff5dcd60b97f7b79dd95a394 226 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 3.2E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_1412 0ba6b914ff5dcd60b97f7b79dd95a394 226 Gene3D G3DSA:1.10.10.60 3 64 6.4E-23 T 15-10-2018 XDD1_1412 0ba6b914ff5dcd60b97f7b79dd95a394 226 Pfam PF09209 Domain of unknown function (DUF1956) 106 222 1.4E-27 T 15-10-2018 IPR015292 Transcription regulator YbiH, C-terminal XDD1_1412 0ba6b914ff5dcd60b97f7b79dd95a394 226 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 8.1E-12 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_1412 0ba6b914ff5dcd60b97f7b79dd95a394 226 Gene3D G3DSA:1.10.357.10 65 226 4.3E-50 T 15-10-2018 XDD1_2657 c3755ca073c9462b97d9d389800c4aab 505 Gene3D G3DSA:3.40.50.2020 279 443 2.0E-159 T 15-10-2018 XDD1_2657 c3755ca073c9462b97d9d389800c4aab 505 Pfam PF13522 Glutamine amidotransferase domain 65 210 5.1E-16 T 15-10-2018 XDD1_2657 c3755ca073c9462b97d9d389800c4aab 505 Gene3D G3DSA:3.60.20.10 2 414 2.0E-159 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XDD1_2657 c3755ca073c9462b97d9d389800c4aab 505 PIRSF PIRSF000485 1 483 2.6E-167 T 15-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 XDD1_2657 c3755ca073c9462b97d9d389800c4aab 505 Pfam PF00156 Phosphoribosyl transferase domain 283 395 5.2E-9 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 XDD1_2657 c3755ca073c9462b97d9d389800c4aab 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.641 T 15-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 XDD1_2657 c3755ca073c9462b97d9d389800c4aab 505 SUPERFAMILY SSF53271 252 485 1.44E-70 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like XDD1_2657 c3755ca073c9462b97d9d389800c4aab 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 3.0E-161 T 15-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 XDD1_2657 c3755ca073c9462b97d9d389800c4aab 505 SUPERFAMILY SSF56235 2 259 2.32E-75 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XDD1_0945 07d5135c539b049067313e2b902e18d7 291 Gene3D G3DSA:3.40.50.10860 8 276 2.0E-107 T 15-10-2018 XDD1_0945 07d5135c539b049067313e2b902e18d7 291 SUPERFAMILY SSF53223 1 122 1.53E-40 T 15-10-2018 XDD1_0945 07d5135c539b049067313e2b902e18d7 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 5.7E-87 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XDD1_0945 07d5135c539b049067313e2b902e18d7 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 5.7E-87 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XDD1_0945 07d5135c539b049067313e2b902e18d7 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 5.7E-87 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XDD1_0945 07d5135c539b049067313e2b902e18d7 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 5.7E-87 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XDD1_0945 07d5135c539b049067313e2b902e18d7 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 5.7E-87 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XDD1_0945 07d5135c539b049067313e2b902e18d7 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 5.7E-87 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XDD1_0945 07d5135c539b049067313e2b902e18d7 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 5.7E-87 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XDD1_0945 07d5135c539b049067313e2b902e18d7 291 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 15-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XDD1_0945 07d5135c539b049067313e2b902e18d7 291 Gene3D G3DSA:3.40.50.720 6 259 2.0E-107 T 15-10-2018 XDD1_0945 07d5135c539b049067313e2b902e18d7 291 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 3.1E-68 T 15-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XDD1_0945 07d5135c539b049067313e2b902e18d7 291 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 15-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XDD1_0945 07d5135c539b049067313e2b902e18d7 291 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 9.2E-40 T 15-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XDD1_0945 07d5135c539b049067313e2b902e18d7 291 SUPERFAMILY SSF51735 123 286 1.81E-52 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0945 07d5135c539b049067313e2b902e18d7 291 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.092 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XDD1_3967 8cb0039f68a6f570f09a8c4dbcceb806 247 SUPERFAMILY SSF56925 103 246 3.45E-23 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel XDD1_3967 8cb0039f68a6f570f09a8c4dbcceb806 247 Pfam PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B 115 246 6.5E-8 T 15-10-2018 IPR001677 Transferrin-binding protein, C-lobe/N-lobe beta barrel domain XDD1_3967 8cb0039f68a6f570f09a8c4dbcceb806 247 Gene3D G3DSA:2.40.160.90 102 247 9.4E-22 T 15-10-2018 XDD1_1430 2e740ecc6a82805e709720dea8e188e5 168 Pfam PF00210 Ferritin-like domain 30 167 6.2E-24 T 15-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 XDD1_1430 2e740ecc6a82805e709720dea8e188e5 168 PIRSF PIRSF005900 10 168 1.2E-42 T 15-10-2018 IPR002177 DNA-binding protein Dps XDD1_1430 2e740ecc6a82805e709720dea8e188e5 168 SUPERFAMILY SSF47240 11 167 2.1E-49 T 15-10-2018 IPR009078 Ferritin-like superfamily XDD1_1430 2e740ecc6a82805e709720dea8e188e5 168 Gene3D G3DSA:1.20.1260.10 1 167 8.7E-51 T 15-10-2018 IPR012347 Ferritin-like XDD1_1430 2e740ecc6a82805e709720dea8e188e5 168 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 1.4E-12 T 15-10-2018 IPR002177 DNA-binding protein Dps XDD1_1430 2e740ecc6a82805e709720dea8e188e5 168 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 1.4E-12 T 15-10-2018 IPR002177 DNA-binding protein Dps XDD1_1430 2e740ecc6a82805e709720dea8e188e5 168 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 1.4E-12 T 15-10-2018 IPR002177 DNA-binding protein Dps XDD1_3686 753805f3a49879b18364ddca121cbe41 523 SUPERFAMILY SSF52540 23 240 9.95E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3686 753805f3a49879b18364ddca121cbe41 523 Gene3D G3DSA:3.40.50.300 281 510 3.2E-41 T 15-10-2018 XDD1_3686 753805f3a49879b18364ddca121cbe41 523 Pfam PF00005 ABC transporter 40 182 4.4E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_3686 753805f3a49879b18364ddca121cbe41 523 Pfam PF00005 ABC transporter 293 444 5.7E-21 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_3686 753805f3a49879b18364ddca121cbe41 523 ProSitePatterns PS00211 ABC transporters family signature. 417 431 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_3686 753805f3a49879b18364ddca121cbe41 523 Gene3D G3DSA:3.40.50.300 6 254 6.5E-54 T 15-10-2018 XDD1_3686 753805f3a49879b18364ddca121cbe41 523 SUPERFAMILY SSF52540 292 498 1.14E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3686 753805f3a49879b18364ddca121cbe41 523 SMART SM00382 301 493 2.8E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3686 753805f3a49879b18364ddca121cbe41 523 SMART SM00382 49 230 8.4E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_2799 66dd3d0cd93b21f32564923824de7452 1299 SUPERFAMILY SSF82697 1 151 2.3E-52 T 15-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XDD1_2799 66dd3d0cd93b21f32564923824de7452 1299 Gene3D G3DSA:3.40.50.880 981 1299 2.9E-140 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_2799 66dd3d0cd93b21f32564923824de7452 1299 Gene3D G3DSA:3.90.650.10 419 605 1.6E-56 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XDD1_2799 66dd3d0cd93b21f32564923824de7452 1299 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1297 0.0 T 15-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XDD1_2799 66dd3d0cd93b21f32564923824de7452 1299 SUPERFAMILY SSF55326 220 427 3.35E-65 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XDD1_2799 66dd3d0cd93b21f32564923824de7452 1299 Gene3D G3DSA:3.30.1330.10 213 418 9.6E-43 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XDD1_2799 66dd3d0cd93b21f32564923824de7452 1299 SUPERFAMILY SSF109736 154 219 7.19E-22 T 15-10-2018 XDD1_2799 66dd3d0cd93b21f32564923824de7452 1299 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1043 1296 9.6E-109 T 15-10-2018 XDD1_2799 66dd3d0cd93b21f32564923824de7452 1299 Pfam PF02769 AIR synthase related protein, C-terminal domain 431 584 2.6E-25 T 15-10-2018 IPR010918 PurM-like, C-terminal domain XDD1_2799 66dd3d0cd93b21f32564923824de7452 1299 Pfam PF02769 AIR synthase related protein, C-terminal domain 825 962 2.8E-10 T 15-10-2018 IPR010918 PurM-like, C-terminal domain XDD1_2799 66dd3d0cd93b21f32564923824de7452 1299 SMART SM01211 1043 1298 3.9E-163 T 15-10-2018 XDD1_2799 66dd3d0cd93b21f32564923824de7452 1299 SUPERFAMILY SSF55326 617 815 1.44E-66 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XDD1_2799 66dd3d0cd93b21f32564923824de7452 1299 SUPERFAMILY SSF56042 821 1031 4.04E-51 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XDD1_2799 66dd3d0cd93b21f32564923824de7452 1299 SUPERFAMILY SSF56042 431 613 4.78E-52 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XDD1_2799 66dd3d0cd93b21f32564923824de7452 1299 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1299 21.525 T 15-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XDD1_2799 66dd3d0cd93b21f32564923824de7452 1299 Gene3D G3DSA:1.10.8.750 152 212 1.6E-28 T 15-10-2018 XDD1_2799 66dd3d0cd93b21f32564923824de7452 1299 Gene3D G3DSA:3.90.650.10 807 980 3.4E-27 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XDD1_2799 66dd3d0cd93b21f32564923824de7452 1299 Gene3D G3DSA:3.30.1330.10 613 806 3.3E-23 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XDD1_2799 66dd3d0cd93b21f32564923824de7452 1299 SUPERFAMILY SSF52317 1040 1297 5.63E-100 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_2061 2d7f26d7aa3928a3be55f7e93fb52774 589 Pfam PF02938 GAD domain 307 406 6.3E-32 T 15-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 XDD1_2061 2d7f26d7aa3928a3be55f7e93fb52774 589 SUPERFAMILY SSF50249 1 105 1.16E-33 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_2061 2d7f26d7aa3928a3be55f7e93fb52774 589 Pfam PF01336 OB-fold nucleic acid binding domain 18 100 5.8E-17 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 XDD1_2061 2d7f26d7aa3928a3be55f7e93fb52774 589 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 586 1.1E-274 T 15-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 XDD1_2061 2d7f26d7aa3928a3be55f7e93fb52774 589 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 5.0E-109 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_2061 2d7f26d7aa3928a3be55f7e93fb52774 589 Gene3D G3DSA:2.40.50.140 1 106 8.3E-35 T 15-10-2018 XDD1_2061 2d7f26d7aa3928a3be55f7e93fb52774 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 4.8E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_2061 2d7f26d7aa3928a3be55f7e93fb52774 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 4.8E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_2061 2d7f26d7aa3928a3be55f7e93fb52774 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 4.8E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_2061 2d7f26d7aa3928a3be55f7e93fb52774 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 4.8E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_2061 2d7f26d7aa3928a3be55f7e93fb52774 589 Gene3D G3DSA:3.30.930.10 118 578 6.3E-200 T 15-10-2018 XDD1_2061 2d7f26d7aa3928a3be55f7e93fb52774 589 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.685 T 15-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 XDD1_2061 2d7f26d7aa3928a3be55f7e93fb52774 589 Gene3D G3DSA:3.30.1360.30 271 420 6.3E-200 T 15-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 XDD1_2061 2d7f26d7aa3928a3be55f7e93fb52774 589 SUPERFAMILY SSF55261 288 419 2.4E-46 T 15-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 XDD1_2061 2d7f26d7aa3928a3be55f7e93fb52774 589 SUPERFAMILY SSF55681 108 584 3.45E-105 T 15-10-2018 XDD1_0104 098c4b1395a645df35906f7efbc7e941 554 SUPERFAMILY SSF51011 476 551 8.8E-18 T 15-10-2018 XDD1_0104 098c4b1395a645df35906f7efbc7e941 554 Pfam PF00128 Alpha amylase, catalytic domain 31 373 3.0E-123 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 XDD1_0104 098c4b1395a645df35906f7efbc7e941 554 SMART SM00642 16 415 1.7E-157 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 XDD1_0104 098c4b1395a645df35906f7efbc7e941 554 SUPERFAMILY SSF51445 6 473 6.14E-155 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily XDD1_0104 098c4b1395a645df35906f7efbc7e941 554 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 8 551 6.3E-257 T 15-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 XDD1_0104 098c4b1395a645df35906f7efbc7e941 554 Gene3D G3DSA:3.20.20.80 8 468 1.2E-187 T 15-10-2018 XDD1_0104 098c4b1395a645df35906f7efbc7e941 554 Pfam PF16657 Maltogenic Amylase, C-terminal domain 476 547 2.4E-6 T 15-10-2018 IPR032091 Maltogenic Amylase, C-terminal XDD1_0104 098c4b1395a645df35906f7efbc7e941 554 Gene3D G3DSA:3.90.400.10 108 176 1.2E-187 T 15-10-2018 XDD1_0104 098c4b1395a645df35906f7efbc7e941 554 Gene3D G3DSA:2.60.40.1180 477 552 1.5E-17 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta XDD1_1524 84cf1d03048cb0e8557e9d8ee5c873d4 196 PIRSF PIRSF000495 1 196 1.7E-61 T 15-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 XDD1_1524 84cf1d03048cb0e8557e9d8ee5c873d4 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 2.4E-67 T 15-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 XDD1_1524 84cf1d03048cb0e8557e9d8ee5c873d4 196 Pfam PF00117 Glutamine amidotransferase class-I 5 194 3.5E-18 T 15-10-2018 IPR017926 Glutamine amidotransferase XDD1_1524 84cf1d03048cb0e8557e9d8ee5c873d4 196 SUPERFAMILY SSF52317 3 195 9.32E-52 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_1524 84cf1d03048cb0e8557e9d8ee5c873d4 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 9.7E-5 T 15-10-2018 XDD1_1524 84cf1d03048cb0e8557e9d8ee5c873d4 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 9.7E-5 T 15-10-2018 XDD1_1524 84cf1d03048cb0e8557e9d8ee5c873d4 196 Gene3D G3DSA:3.40.50.880 1 196 4.8E-66 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_1524 84cf1d03048cb0e8557e9d8ee5c873d4 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 32.651 T 15-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 XDD1_3520 0f103c9d9bade1051bf1db01f02803e3 262 Pfam PF02405 Permease MlaE 48 258 2.7E-74 T 15-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 XDD1_3520 0f103c9d9bade1051bf1db01f02803e3 262 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 7 260 2.0E-101 T 15-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria XDD1_3624 6b4dbea728fcf53c73af728cd32fe539 199 SUPERFAMILY SSF49899 7 188 1.98E-32 T 15-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily XDD1_3624 6b4dbea728fcf53c73af728cd32fe539 199 Pfam PF07081 Protein of unknown function (DUF1349) 8 189 2.7E-63 T 15-10-2018 IPR009784 Protein of unknown function DUF1349 XDD1_3624 6b4dbea728fcf53c73af728cd32fe539 199 Gene3D G3DSA:2.60.120.200 1 199 5.6E-59 T 15-10-2018 XDD1_3624 6b4dbea728fcf53c73af728cd32fe539 199 PIRSF PIRSF022704 1 199 3.1E-64 T 15-10-2018 IPR015987 Uncharacterised conserved protein UCP022704 XDD1_2811 a6da8cce9ee2d9eedfc5a1b257a530a0 322 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 258 302 1.6E-16 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 XDD1_2811 a6da8cce9ee2d9eedfc5a1b257a530a0 322 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 64 158 4.0E-25 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 XDD1_2811 a6da8cce9ee2d9eedfc5a1b257a530a0 322 ProSitePatterns PS00501 Signal peptidases I serine active site. 88 95 - T 15-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 XDD1_2811 a6da8cce9ee2d9eedfc5a1b257a530a0 322 Gene3D G3DSA:2.170.230.10 154 261 3.8E-65 T 15-10-2018 XDD1_2811 a6da8cce9ee2d9eedfc5a1b257a530a0 322 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 155 5.3E-25 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 XDD1_2811 a6da8cce9ee2d9eedfc5a1b257a530a0 322 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 95 5.3E-25 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 XDD1_2811 a6da8cce9ee2d9eedfc5a1b257a530a0 322 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 262 281 5.3E-25 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 XDD1_2811 a6da8cce9ee2d9eedfc5a1b257a530a0 322 ProSitePatterns PS00760 Signal peptidases I lysine active site. 145 157 - T 15-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 XDD1_2811 a6da8cce9ee2d9eedfc5a1b257a530a0 322 Pfam PF10502 Signal peptidase, peptidase S26 260 300 7.1E-5 T 15-10-2018 IPR019533 Peptidase S26 XDD1_2811 a6da8cce9ee2d9eedfc5a1b257a530a0 322 SUPERFAMILY SSF51306 77 321 7.06E-72 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XDD1_2811 a6da8cce9ee2d9eedfc5a1b257a530a0 322 Gene3D G3DSA:2.10.109.10 79 302 3.8E-65 T 15-10-2018 XDD1_2811 a6da8cce9ee2d9eedfc5a1b257a530a0 322 Pfam PF00717 Peptidase S24-like 85 157 8.5E-21 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C XDD1_2126 437594736997e2d1c2ded1fcb18ec08f 178 Pfam PF13358 DDE superfamily endonuclease 15 149 1.2E-31 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2126 437594736997e2d1c2ded1fcb18ec08f 178 Gene3D G3DSA:3.30.420.470 8 167 3.7E-10 T 15-10-2018 XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 Gene3D G3DSA:3.40.50.300 366 563 6.0E-43 T 15-10-2018 XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 Gene3D G3DSA:1.10.1780.10 1 161 2.3E-39 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 SUPERFAMILY SSF81923 13 127 4.71E-14 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 SUPERFAMILY SSF52540 565 867 3.48E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 225 357 1.0E-8 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 Gene3D G3DSA:3.40.50.300 171 364 1.7E-61 T 15-10-2018 XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 SMART SM00382 616 758 6.4E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 SMART SM00382 220 365 8.9E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 694 712 2.8E-33 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 727 741 2.8E-33 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 620 638 2.8E-33 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 665 683 2.8E-33 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 872 0.0 T 15-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 SMART SM01086 788 880 1.8E-14 T 15-10-2018 IPR019489 Clp ATPase, C-terminal XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 Gene3D G3DSA:1.10.8.60 788 883 1.0E-13 T 15-10-2018 XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 Pfam PF07724 AAA domain (Cdc48 subfamily) 615 781 7.0E-39 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 Gene3D G3DSA:3.40.50.300 569 786 8.8E-66 T 15-10-2018 XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 SUPERFAMILY SSF52540 181 532 6.12E-73 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 316 328 - T 15-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 XDD1_1884 8be9f87a4d9bcbb810ef1da8c865ee08 884 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 788 864 3.8E-14 T 15-10-2018 IPR019489 Clp ATPase, C-terminal XDD1_1061 8888498db84a8ee0d5fb84ea2dbf45d2 698 SUPERFAMILY SSF52540 376 583 4.5E-13 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1061 8888498db84a8ee0d5fb84ea2dbf45d2 698 Pfam PF08273 Zinc-binding domain of primase-helicase 53 92 1.2E-9 T 15-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 XDD1_1061 8888498db84a8ee0d5fb84ea2dbf45d2 698 SUPERFAMILY SSF57783 39 122 8.25E-11 T 15-10-2018 XDD1_1061 8888498db84a8ee0d5fb84ea2dbf45d2 698 Gene3D G3DSA:3.90.580.10 45 121 3.6E-5 T 15-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 XDD1_1061 8888498db84a8ee0d5fb84ea2dbf45d2 698 Pfam PF13362 Toprim domain 219 324 8.8E-9 T 15-10-2018 IPR006171 TOPRIM domain XDD1_1061 8888498db84a8ee0d5fb84ea2dbf45d2 698 SMART SM00778 53 92 1.8E-9 T 15-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 XDD1_1061 8888498db84a8ee0d5fb84ea2dbf45d2 698 Gene3D G3DSA:3.40.50.300 372 606 6.0E-38 T 15-10-2018 XDD1_1061 8888498db84a8ee0d5fb84ea2dbf45d2 698 Pfam PF13481 AAA domain 374 541 1.8E-37 T 15-10-2018 XDD1_0736 d690b915d10b8844298111669299921a 891 Gene3D G3DSA:3.10.20.410 77 200 2.6E-17 T 15-10-2018 XDD1_0736 d690b915d10b8844298111669299921a 891 Pfam PF00577 Outer membrane usher protein 243 799 4.6E-187 T 15-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 XDD1_0736 d690b915d10b8844298111669299921a 891 Pfam PF13953 PapC C-terminal domain 809 866 2.4E-14 T 15-10-2018 IPR025949 PapC-like, C-terminal domain XDD1_0736 d690b915d10b8844298111669299921a 891 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 365 375 - T 15-10-2018 IPR018030 Fimbrial membrane usher, conserved site XDD1_0736 d690b915d10b8844298111669299921a 891 SUPERFAMILY SSF141729 78 199 1.7E-26 T 15-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 XDD1_0736 d690b915d10b8844298111669299921a 891 Gene3D G3DSA:2.60.40.2070 808 885 1.8E-28 T 15-10-2018 XDD1_0736 d690b915d10b8844298111669299921a 891 Gene3D G3DSA:2.60.40.3110 323 411 8.8E-29 T 15-10-2018 XDD1_0736 d690b915d10b8844298111669299921a 891 Pfam PF13954 PapC N-terminal domain 79 225 1.1E-33 T 15-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 XDD1_0736 d690b915d10b8844298111669299921a 891 Gene3D G3DSA:2.60.40.2610 712 804 2.3E-12 T 15-10-2018 XDD1_2213 c5fe9a5a46a44f6bfb46a1f69a256c08 206 SUPERFAMILY SSF55821 1 204 5.19E-64 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily XDD1_2213 c5fe9a5a46a44f6bfb46a1f69a256c08 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 202 1.1E-72 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 XDD1_2213 c5fe9a5a46a44f6bfb46a1f69a256c08 206 Pfam PF01300 Telomere recombination 22 198 4.5E-47 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 XDD1_2213 c5fe9a5a46a44f6bfb46a1f69a256c08 206 Gene3D G3DSA:3.90.870.10 1 206 7.1E-70 T 15-10-2018 XDD1_2891 25f9ef831a25df021c17410a68495f7b 431 Gene3D G3DSA:3.40.50.2000 257 412 9.4E-33 T 15-10-2018 XDD1_2891 25f9ef831a25df021c17410a68495f7b 431 SUPERFAMILY SSF53756 7 427 1.32E-61 T 15-10-2018 XDD1_2891 25f9ef831a25df021c17410a68495f7b 431 Gene3D G3DSA:3.40.50.2000 5 256 5.5E-30 T 15-10-2018 XDD1_2891 25f9ef831a25df021c17410a68495f7b 431 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 286 403 1.6E-5 T 15-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 XDD1_2891 25f9ef831a25df021c17410a68495f7b 431 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 141 3.0E-6 T 15-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_3529 915067d68da093697bce304c9a666573 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 2.0E-32 T 15-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 XDD1_3529 915067d68da093697bce304c9a666573 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 4.3E-27 T 15-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 XDD1_3529 915067d68da093697bce304c9a666573 95 SUPERFAMILY SSF69754 1 95 7.72E-33 T 15-10-2018 IPR036567 Ribosome hibernation promotion factor-like XDD1_3529 915067d68da093697bce304c9a666573 95 Gene3D G3DSA:3.30.160.100 1 95 4.1E-36 T 15-10-2018 IPR036567 Ribosome hibernation promotion factor-like XDD1_1606 7ad8d2692ca87e3834e6f819034e1b9f 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 2.5E-29 T 15-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain XDD1_1606 7ad8d2692ca87e3834e6f819034e1b9f 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 2.0E-61 T 15-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 XDD1_1606 7ad8d2692ca87e3834e6f819034e1b9f 149 Pfam PF06303 MatP N-terminal domain 2 85 9.8E-45 T 15-10-2018 IPR035087 MatP, N-terminal XDD1_1606 7ad8d2692ca87e3834e6f819034e1b9f 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.029 T 15-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 XDD1_1606 7ad8d2692ca87e3834e6f819034e1b9f 149 Gene3D G3DSA:1.10.1220.10 98 149 5.1E-28 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 XDD1_1606 7ad8d2692ca87e3834e6f819034e1b9f 149 Gene3D G3DSA:1.20.1270.380 1 89 5.2E-47 T 15-10-2018 IPR038339 MatP, N-terminal domain superfamily XDD1_1630 b9716e049969981239ecfb34ba2e261f 244 Pfam PF11195 Protein of unknown function (DUF2829) 40 104 7.8E-9 T 15-10-2018 IPR021361 Protein of unknown function DUF2829 XDD1_0311 3ae51d0dbf190bfe14513853d4d514f0 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 1.8E-31 T 15-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XDD1_0311 3ae51d0dbf190bfe14513853d4d514f0 315 Pfam PF00551 Formyl transferase 6 181 2.7E-50 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XDD1_0311 3ae51d0dbf190bfe14513853d4d514f0 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 3.2E-110 T 15-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 XDD1_0311 3ae51d0dbf190bfe14513853d4d514f0 315 SUPERFAMILY SSF53328 5 207 1.31E-67 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XDD1_0311 3ae51d0dbf190bfe14513853d4d514f0 315 SUPERFAMILY SSF50486 208 309 1.02E-35 T 15-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 XDD1_0311 3ae51d0dbf190bfe14513853d4d514f0 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 15-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XDD1_0311 3ae51d0dbf190bfe14513853d4d514f0 315 Gene3D G3DSA:3.40.50.170 1 209 1.4E-86 T 15-10-2018 XDD1_0311 3ae51d0dbf190bfe14513853d4d514f0 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 37.331 T 15-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 XDD1_0311 3ae51d0dbf190bfe14513853d4d514f0 315 Gene3D G3DSA:3.10.25.10 210 315 5.5E-39 T 15-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XDD1_1143 4cfa4dc34609a773f1478db6659c6586 259 Pfam PF01300 Telomere recombination 22 184 9.3E-10 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 XDD1_1143 4cfa4dc34609a773f1478db6659c6586 259 SUPERFAMILY SSF55821 5 189 1.4E-21 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily XDD1_1143 4cfa4dc34609a773f1478db6659c6586 259 Gene3D G3DSA:3.90.870.10 1 259 1.1E-103 T 15-10-2018 XDD1_3513 c84194ad3f567d1e96b3679c0114bb88 459 SUPERFAMILY SSF50156 388 457 1.12E-13 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 XDD1_3513 c84194ad3f567d1e96b3679c0114bb88 459 Gene3D G3DSA:2.30.42.10 370 459 3.9E-21 T 15-10-2018 XDD1_3513 c84194ad3f567d1e96b3679c0114bb88 459 SUPERFAMILY SSF50494 39 262 1.4E-64 T 15-10-2018 IPR009003 Peptidase S1, PA clan XDD1_3513 c84194ad3f567d1e96b3679c0114bb88 459 SMART SM00228 271 353 4.2E-13 T 15-10-2018 IPR001478 PDZ domain GO:0005515 XDD1_3513 c84194ad3f567d1e96b3679c0114bb88 459 SMART SM00228 373 450 1.8E-9 T 15-10-2018 IPR001478 PDZ domain GO:0005515 XDD1_3513 c84194ad3f567d1e96b3679c0114bb88 459 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 381 446 6.8E-8 T 15-10-2018 IPR001478 PDZ domain GO:0005515 XDD1_3513 c84194ad3f567d1e96b3679c0114bb88 459 Gene3D G3DSA:2.40.10.120 39 265 5.0E-84 T 15-10-2018 XDD1_3513 c84194ad3f567d1e96b3679c0114bb88 459 Gene3D G3DSA:2.30.42.10 269 369 6.3E-28 T 15-10-2018 XDD1_3513 c84194ad3f567d1e96b3679c0114bb88 459 Pfam PF13180 PDZ domain 289 361 2.5E-15 T 15-10-2018 IPR001478 PDZ domain GO:0005515 XDD1_3513 c84194ad3f567d1e96b3679c0114bb88 459 SUPERFAMILY SSF50156 229 354 3.94E-23 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 XDD1_3513 c84194ad3f567d1e96b3679c0114bb88 459 Pfam PF13365 Trypsin-like peptidase domain 96 232 1.6E-31 T 15-10-2018 XDD1_3513 c84194ad3f567d1e96b3679c0114bb88 459 PRINTS PR00834 HtrA/DegQ protease family signature 203 220 1.2E-57 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XDD1_3513 c84194ad3f567d1e96b3679c0114bb88 459 PRINTS PR00834 HtrA/DegQ protease family signature 168 192 1.2E-57 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XDD1_3513 c84194ad3f567d1e96b3679c0114bb88 459 PRINTS PR00834 HtrA/DegQ protease family signature 106 118 1.2E-57 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XDD1_3513 c84194ad3f567d1e96b3679c0114bb88 459 PRINTS PR00834 HtrA/DegQ protease family signature 127 147 1.2E-57 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XDD1_3513 c84194ad3f567d1e96b3679c0114bb88 459 PRINTS PR00834 HtrA/DegQ protease family signature 225 242 1.2E-57 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XDD1_3513 c84194ad3f567d1e96b3679c0114bb88 459 PRINTS PR00834 HtrA/DegQ protease family signature 311 323 1.2E-57 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XDD1_3513 c84194ad3f567d1e96b3679c0114bb88 459 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 456 2.5E-157 T 15-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 XDD1_3615 d307b3169eb19f19632620db25477dd7 658 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 168 621 99.408 T 15-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 XDD1_3615 d307b3169eb19f19632620db25477dd7 658 Gene3D G3DSA:3.20.20.540 239 552 2.6E-152 T 15-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 XDD1_3615 d307b3169eb19f19632620db25477dd7 658 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 168 620 2.6E-222 T 15-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 XDD1_3615 d307b3169eb19f19632620db25477dd7 658 Pfam PF01964 Radical SAM ThiC family 169 616 1.4E-198 T 15-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 XDD1_3615 d307b3169eb19f19632620db25477dd7 658 Pfam PF13667 ThiC-associated domain 48 129 1.0E-33 T 15-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 XDD1_0158 5ececea8c78e75ff8934443291d956eb 273 PIRSF PIRSF000441 75 266 1.1E-60 T 15-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 XDD1_0158 5ececea8c78e75ff8934443291d956eb 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 227 1.2E-9 T 15-10-2018 IPR001451 Hexapeptide repeat XDD1_0158 5ececea8c78e75ff8934443291d956eb 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XDD1_0158 5ececea8c78e75ff8934443291d956eb 273 Gene3D G3DSA:1.10.3130.10 1 142 3.1E-54 T 15-10-2018 XDD1_0158 5ececea8c78e75ff8934443291d956eb 273 SUPERFAMILY SSF51161 8 260 1.37E-67 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily XDD1_0158 5ececea8c78e75ff8934443291d956eb 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.8E-75 T 15-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 XDD1_0158 5ececea8c78e75ff8934443291d956eb 273 SMART SM00971 9 113 5.8E-62 T 15-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 XDD1_0158 5ececea8c78e75ff8934443291d956eb 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 2.0E-38 T 15-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 XDD1_0158 5ececea8c78e75ff8934443291d956eb 273 Gene3D G3DSA:2.160.10.10 143 270 8.6E-38 T 15-10-2018 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 SUPERFAMILY SSF82866 290 490 7.46E-47 T 15-10-2018 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 Gene3D G3DSA:1.20.1640.10 503 1007 4.1E-295 T 15-10-2018 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 SUPERFAMILY SSF82693 40 133 4.19E-24 T 15-10-2018 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 Gene3D G3DSA:3.30.70.1430 557 648 4.1E-295 T 15-10-2018 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 Gene3D G3DSA:3.30.70.1320 135 326 4.1E-295 T 15-10-2018 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 SUPERFAMILY SSF82714 706 786 4.19E-16 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 SUPERFAMILY SSF82714 183 265 2.49E-17 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 SUPERFAMILY SSF82693 555 649 7.33E-15 T 15-10-2018 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 Gene3D G3DSA:3.30.70.1440 649 849 4.1E-295 T 15-10-2018 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 SUPERFAMILY SSF82693 136 324 2.96E-20 T 15-10-2018 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1026 24.69 T 15-10-2018 IPR023931 Multidrug resistance protein MdtC XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 SUPERFAMILY SSF82693 653 834 7.85E-8 T 15-10-2018 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 Gene3D G3DSA:1.20.1640.10 10 502 4.1E-295 T 15-10-2018 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 Gene3D G3DSA:3.30.2090.10 179 269 4.1E-295 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 Pfam PF00873 AcrB/AcrD/AcrF family 4 1010 0.0 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.3E-83 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.3E-83 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.3E-83 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.3E-83 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.3E-83 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.3E-83 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.3E-83 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 1.3E-83 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 1.3E-83 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 Gene3D G3DSA:3.30.70.1430 40 799 4.1E-295 T 15-10-2018 XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 Gene3D G3DSA:3.30.2090.10 703 791 4.1E-295 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XDD1_2456 61efb57221c552990e497a31f61f34e0 1036 SUPERFAMILY SSF82866 813 1012 3.01E-41 T 15-10-2018 XDD1_1248 625906c68aeb18e55eaaf490c273e4b3 423 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 244 322 3.0E-12 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XDD1_1248 625906c68aeb18e55eaaf490c273e4b3 423 Gene3D G3DSA:2.40.50.100 90 124 4.1E-9 T 15-10-2018 XDD1_1248 625906c68aeb18e55eaaf490c273e4b3 423 Pfam PF00529 HlyD membrane-fusion protein of T1SS 66 377 1.6E-16 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 XDD1_1248 625906c68aeb18e55eaaf490c273e4b3 423 Gene3D G3DSA:1.10.287.470 125 141 4.1E-9 T 15-10-2018 XDD1_1248 625906c68aeb18e55eaaf490c273e4b3 423 Gene3D G3DSA:2.40.30.170 264 383 2.8E-36 T 15-10-2018 XDD1_1248 625906c68aeb18e55eaaf490c273e4b3 423 SUPERFAMILY SSF111369 224 297 7.19E-7 T 15-10-2018 XDD1_1248 625906c68aeb18e55eaaf490c273e4b3 423 SUPERFAMILY SSF111369 88 209 6.28E-8 T 15-10-2018 XDD1_1248 625906c68aeb18e55eaaf490c273e4b3 423 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 50 375 5.2E-127 T 15-10-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 XDD1_0107 4b68524d40929c6eba171470b1000821 315 Gene3D G3DSA:1.20.58.1460 189 269 1.9E-27 T 15-10-2018 XDD1_0107 4b68524d40929c6eba171470b1000821 315 PIRSF PIRSF020623 1 307 2.4E-108 T 15-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 XDD1_0107 4b68524d40929c6eba171470b1000821 315 TIGRFAM TIGR02277 PaaX_trns_reg: phenylacetic acid degradation operon negative regulatory protein PaaX 22 304 7.2E-98 T 15-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 XDD1_0107 4b68524d40929c6eba171470b1000821 315 Gene3D G3DSA:3.30.70.2670 102 188 1.9E-27 T 15-10-2018 XDD1_0107 4b68524d40929c6eba171470b1000821 315 Pfam PF07848 PaaX-like protein 20 88 2.7E-26 T 15-10-2018 IPR012906 PaaX-like, N-terminal XDD1_0107 4b68524d40929c6eba171470b1000821 315 Pfam PF08223 PaaX-like protein C-terminal domain 184 282 2.8E-29 T 15-10-2018 IPR013225 PaaX-like, C-terminal XDD1_0107 4b68524d40929c6eba171470b1000821 315 Gene3D G3DSA:1.10.10.10 22 101 1.9E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1538 bc0ae8cc373ce34875b3cbe97ff0db8e 171 Pfam PF10722 Putative bacterial sensory transduction regulator 9 134 6.5E-14 T 15-10-2018 IPR019660 Putative sensory transduction regulator YbjN XDD1_3331 867af395def75e7eb6eb16a4a8345522 347 Pfam PF13384 Homeodomain-like domain 28 72 2.6E-9 T 15-10-2018 XDD1_3331 867af395def75e7eb6eb16a4a8345522 347 SUPERFAMILY SSF46689 25 140 1.27E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3331 867af395def75e7eb6eb16a4a8345522 347 Gene3D G3DSA:3.30.420.470 145 335 5.4E-13 T 15-10-2018 XDD1_3331 867af395def75e7eb6eb16a4a8345522 347 Pfam PF13358 DDE superfamily endonuclease 177 309 5.4E-30 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_3331 867af395def75e7eb6eb16a4a8345522 347 SUPERFAMILY SSF53098 207 310 9.29E-8 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_1527 f9591edfe3b91a67ef39cb83b1294354 437 Pfam PF00815 Histidinol dehydrogenase 31 429 1.6E-167 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XDD1_1527 f9591edfe3b91a67ef39cb83b1294354 437 Gene3D G3DSA:3.40.50.1980 236 351 2.1E-123 T 15-10-2018 XDD1_1527 f9591edfe3b91a67ef39cb83b1294354 437 PIRSF PIRSF000099 3 432 7.6E-167 T 15-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XDD1_1527 f9591edfe3b91a67ef39cb83b1294354 437 Gene3D G3DSA:3.40.50.1980 35 234 2.1E-123 T 15-10-2018 XDD1_1527 f9591edfe3b91a67ef39cb83b1294354 437 SUPERFAMILY SSF53720 9 429 1.43E-87 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XDD1_1527 f9591edfe3b91a67ef39cb83b1294354 437 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 9 429 40.863 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XDD1_1527 f9591edfe3b91a67ef39cb83b1294354 437 PRINTS PR00083 Histidinol dehydrogenase signature 322 347 4.9E-99 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XDD1_1527 f9591edfe3b91a67ef39cb83b1294354 437 PRINTS PR00083 Histidinol dehydrogenase signature 200 225 4.9E-99 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XDD1_1527 f9591edfe3b91a67ef39cb83b1294354 437 PRINTS PR00083 Histidinol dehydrogenase signature 139 165 4.9E-99 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XDD1_1527 f9591edfe3b91a67ef39cb83b1294354 437 PRINTS PR00083 Histidinol dehydrogenase signature 254 273 4.9E-99 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XDD1_1527 f9591edfe3b91a67ef39cb83b1294354 437 PRINTS PR00083 Histidinol dehydrogenase signature 38 62 4.9E-99 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XDD1_1527 f9591edfe3b91a67ef39cb83b1294354 437 PRINTS PR00083 Histidinol dehydrogenase signature 232 253 4.9E-99 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XDD1_1527 f9591edfe3b91a67ef39cb83b1294354 437 PRINTS PR00083 Histidinol dehydrogenase signature 170 196 4.9E-99 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XDD1_1527 f9591edfe3b91a67ef39cb83b1294354 437 PRINTS PR00083 Histidinol dehydrogenase signature 363 381 4.9E-99 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XDD1_1527 f9591edfe3b91a67ef39cb83b1294354 437 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 38 428 1.5E-162 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XDD1_1065 214b5515423014398502bacb509bac7d 295 Gene3D G3DSA:3.40.50.300 1 284 1.2E-33 T 15-10-2018 XDD1_1065 214b5515423014398502bacb509bac7d 295 Pfam PF13614 AAA domain 1 149 7.5E-18 T 15-10-2018 IPR025669 AAA domain XDD1_1065 214b5515423014398502bacb509bac7d 295 SUPERFAMILY SSF52540 1 275 1.39E-30 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2569 32d83b163887bc5c7dc7bf00a83a7dbc 256 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 15 252 3.6E-80 T 15-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 XDD1_2569 32d83b163887bc5c7dc7bf00a83a7dbc 256 Pfam PF12697 Alpha/beta hydrolase family 17 238 1.3E-13 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_2569 32d83b163887bc5c7dc7bf00a83a7dbc 256 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 12 253 34.101 T 15-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 XDD1_2569 32d83b163887bc5c7dc7bf00a83a7dbc 256 Gene3D G3DSA:3.40.50.1820 3 253 8.3E-56 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2569 32d83b163887bc5c7dc7bf00a83a7dbc 256 SUPERFAMILY SSF53474 2 252 4.53E-39 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2375 7c4a09d7036397d64dcc6f3200584d5c 337 Gene3D G3DSA:3.30.1330.60 105 294 6.8E-55 T 15-10-2018 IPR036737 OmpA-like domain superfamily XDD1_2375 7c4a09d7036397d64dcc6f3200584d5c 337 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 65 1.3E-19 T 15-10-2018 IPR025713 Motility protein B, N-terminal domain XDD1_2375 7c4a09d7036397d64dcc6f3200584d5c 337 SUPERFAMILY SSF103088 155 263 1.44E-14 T 15-10-2018 IPR036737 OmpA-like domain superfamily XDD1_2375 7c4a09d7036397d64dcc6f3200584d5c 337 Pfam PF00691 OmpA family 158 247 1.8E-10 T 15-10-2018 IPR006665 OmpA-like domain XDD1_2706 57b643283099ec72d54b527c6e08306f 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 2.5E-254 T 15-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 XDD1_2706 57b643283099ec72d54b527c6e08306f 575 Gene3D G3DSA:1.10.274.10 21 146 2.0E-79 T 15-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 XDD1_2706 57b643283099ec72d54b527c6e08306f 575 Gene3D G3DSA:3.20.20.60 234 575 1.2E-127 T 15-10-2018 XDD1_2706 57b643283099ec72d54b527c6e08306f 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 15-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 XDD1_2706 57b643283099ec72d54b527c6e08306f 575 Gene3D G3DSA:3.50.30.10 4 233 2.0E-79 T 15-10-2018 XDD1_2706 57b643283099ec72d54b527c6e08306f 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 4.5E-31 T 15-10-2018 XDD1_2706 57b643283099ec72d54b527c6e08306f 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 4.5E-31 T 15-10-2018 XDD1_2706 57b643283099ec72d54b527c6e08306f 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 4.5E-31 T 15-10-2018 XDD1_2706 57b643283099ec72d54b527c6e08306f 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 4.5E-31 T 15-10-2018 XDD1_2706 57b643283099ec72d54b527c6e08306f 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 15-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 XDD1_2706 57b643283099ec72d54b527c6e08306f 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.0E-22 T 15-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 XDD1_2706 57b643283099ec72d54b527c6e08306f 575 SUPERFAMILY SSF51621 249 549 4.71E-111 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XDD1_2706 57b643283099ec72d54b527c6e08306f 575 PIRSF PIRSF000732 1 574 6.9E-222 T 15-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 XDD1_2706 57b643283099ec72d54b527c6e08306f 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 1.9E-125 T 15-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 XDD1_2706 57b643283099ec72d54b527c6e08306f 575 SUPERFAMILY SSF47831 25 142 3.27E-33 T 15-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 XDD1_2706 57b643283099ec72d54b527c6e08306f 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 2.1E-29 T 15-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 XDD1_2706 57b643283099ec72d54b527c6e08306f 575 SUPERFAMILY SSF52009 125 246 3.79E-36 T 15-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 Gene3D G3DSA:1.20.990.10 296 400 1.9E-73 T 15-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 Gene3D G3DSA:3.40.50.80 461 615 8.9E-58 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 541 557 1.6E-27 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 286 296 1.6E-27 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 472 491 1.6E-27 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 402 409 1.6E-27 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 497 506 1.6E-27 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 510 521 1.6E-27 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 435 444 1.6E-27 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 564 572 1.6E-27 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 Pfam PF00175 Oxidoreductase NAD-binding domain 473 579 1.6E-17 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 SUPERFAMILY SSF52343 460 615 1.31E-50 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 PRINTS PR00369 Flavodoxin signature 182 201 6.6E-13 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 PRINTS PR00369 Flavodoxin signature 126 137 6.6E-13 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 PRINTS PR00369 Flavodoxin signature 158 168 6.6E-13 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 PRINTS PR00369 Flavodoxin signature 78 91 6.6E-13 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 SUPERFAMILY SSF63380 245 462 4.0E-64 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 Pfam PF00667 FAD binding domain 250 440 1.3E-23 T 15-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 PIRSF PIRSF000207 15 615 1.8E-269 T 15-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 Gene3D G3DSA:3.40.50.360 68 229 7.2E-46 T 15-10-2018 IPR029039 Flavoprotein-like superfamily XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 24 615 8.0E-265 T 15-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 Gene3D G3DSA:2.40.30.10 248 455 1.9E-73 T 15-10-2018 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 16 615 51.053 T 15-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 SUPERFAMILY SSF52218 77 222 4.39E-41 T 15-10-2018 IPR029039 Flavoprotein-like superfamily XDD1_3173 7a5f18ad8d1f70e025fd7a256a1a5c74 615 Pfam PF00258 Flavodoxin 80 208 1.3E-27 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 XDD1_1281 d6c742ab09ddcab0d1449e583efcd891 295 SMART SM00062 34 266 3.9E-63 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XDD1_1281 d6c742ab09ddcab0d1449e583efcd891 295 Gene3D G3DSA:3.40.190.10 128 223 1.3E-101 T 15-10-2018 XDD1_1281 d6c742ab09ddcab0d1449e583efcd891 295 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 264 5.9E-47 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XDD1_1281 d6c742ab09ddcab0d1449e583efcd891 295 SUPERFAMILY SSF53850 1 267 4.35E-64 T 15-10-2018 XDD1_1281 d6c742ab09ddcab0d1449e583efcd891 295 Gene3D G3DSA:3.40.190.10 24 269 1.3E-101 T 15-10-2018 XDD1_0534 e0188fcb886427de310416cfe74baef1 158 Gene3D G3DSA:1.20.1250.20 2 148 9.9E-12 T 15-10-2018 XDD1_0534 e0188fcb886427de310416cfe74baef1 158 SUPERFAMILY SSF103473 10 148 2.35E-16 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0534 e0188fcb886427de310416cfe74baef1 158 Pfam PF07690 Major Facilitator Superfamily 7 141 1.4E-9 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_3362 608910ffb097fe75392aa4a74f83a347 963 SUPERFAMILY SSF63411 265 503 5.0E-61 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 XDD1_3362 608910ffb097fe75392aa4a74f83a347 963 SUPERFAMILY SSF63411 746 958 2.62E-46 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 XDD1_3362 608910ffb097fe75392aa4a74f83a347 963 Pfam PF05193 Peptidase M16 inactive domain 684 860 1.4E-10 T 15-10-2018 IPR007863 Peptidase M16, C-terminal XDD1_3362 608910ffb097fe75392aa4a74f83a347 963 Pfam PF05193 Peptidase M16 inactive domain 218 393 2.2E-15 T 15-10-2018 IPR007863 Peptidase M16, C-terminal XDD1_3362 608910ffb097fe75392aa4a74f83a347 963 Gene3D G3DSA:3.30.830.10 25 271 8.0E-73 T 15-10-2018 XDD1_3362 608910ffb097fe75392aa4a74f83a347 963 SUPERFAMILY SSF63411 505 731 1.17E-38 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 XDD1_3362 608910ffb097fe75392aa4a74f83a347 963 Pfam PF00675 Insulinase (Peptidase family M16) 55 173 1.5E-31 T 15-10-2018 IPR011765 Peptidase M16, N-terminal XDD1_3362 608910ffb097fe75392aa4a74f83a347 963 Pfam PF16187 Middle or third domain of peptidase_M16 401 679 1.6E-55 T 15-10-2018 IPR032632 Peptidase M16, middle/third domain XDD1_3362 608910ffb097fe75392aa4a74f83a347 963 Gene3D G3DSA:3.30.830.10 272 503 1.3E-64 T 15-10-2018 XDD1_3362 608910ffb097fe75392aa4a74f83a347 963 SUPERFAMILY SSF63411 33 261 5.3E-45 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 XDD1_3362 608910ffb097fe75392aa4a74f83a347 963 Gene3D G3DSA:3.30.830.10 654 919 6.8E-120 T 15-10-2018 XDD1_3362 608910ffb097fe75392aa4a74f83a347 963 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 75 98 - T 15-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 XDD1_3362 608910ffb097fe75392aa4a74f83a347 963 Gene3D G3DSA:3.30.830.10 505 887 6.8E-120 T 15-10-2018 XDD1_0955 34e280e704079af530e03e9148a5bdf7 94 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 6 91 1.3E-34 T 15-10-2018 IPR014057 Uncharacterized protein HI1420 XDD1_0955 34e280e704079af530e03e9148a5bdf7 94 SUPERFAMILY SSF47413 29 89 3.38E-10 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_0955 34e280e704079af530e03e9148a5bdf7 94 Gene3D G3DSA:1.10.260.40 41 90 4.3E-6 T 15-10-2018 XDD1_0955 34e280e704079af530e03e9148a5bdf7 94 Pfam PF01381 Helix-turn-helix 47 89 2.1E-8 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_1039 4339bee8c2d785616890b9f97aa569a3 330 SUPERFAMILY SSF51735 2 144 4.8E-37 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1039 4339bee8c2d785616890b9f97aa569a3 330 Gene3D G3DSA:3.40.50.720 5 321 2.3E-90 T 15-10-2018 XDD1_1039 4339bee8c2d785616890b9f97aa569a3 330 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 119 2.6E-19 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 XDD1_1039 4339bee8c2d785616890b9f97aa569a3 330 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 1 327 9.9E-132 T 15-10-2018 IPR030827 Inositol 2-dehydrogenase XDD1_1039 4339bee8c2d785616890b9f97aa569a3 330 Gene3D G3DSA:3.30.360.10 138 268 2.3E-90 T 15-10-2018 XDD1_1039 4339bee8c2d785616890b9f97aa569a3 330 SUPERFAMILY SSF55347 124 286 5.23E-35 T 15-10-2018 XDD1_1039 4339bee8c2d785616890b9f97aa569a3 330 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 235 9.5E-6 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 XDD1_3407 2f7034be941ea8642f4a598d752904a6 474 Pfam PF01467 Cytidylyltransferase-like 345 469 1.6E-16 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XDD1_3407 2f7034be941ea8642f4a598d752904a6 474 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 1.6E-18 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XDD1_3407 2f7034be941ea8642f4a598d752904a6 474 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 331 472 2.7E-65 T 15-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 XDD1_3407 2f7034be941ea8642f4a598d752904a6 474 SUPERFAMILY SSF53613 12 308 2.03E-56 T 15-10-2018 IPR029056 Ribokinase-like XDD1_3407 2f7034be941ea8642f4a598d752904a6 474 SUPERFAMILY SSF52374 341 471 9.57E-24 T 15-10-2018 XDD1_3407 2f7034be941ea8642f4a598d752904a6 474 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 9.9E-128 T 15-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 XDD1_3407 2f7034be941ea8642f4a598d752904a6 474 Gene3D G3DSA:3.40.50.620 319 474 4.4E-40 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_3407 2f7034be941ea8642f4a598d752904a6 474 Gene3D G3DSA:3.40.1190.20 2 309 4.2E-112 T 15-10-2018 IPR029056 Ribokinase-like XDD1_3407 2f7034be941ea8642f4a598d752904a6 474 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 XDD1_3407 2f7034be941ea8642f4a598d752904a6 474 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.68 T 15-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 XDD1_3407 2f7034be941ea8642f4a598d752904a6 474 Pfam PF00294 pfkB family carbohydrate kinase 13 302 4.6E-51 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB XDD1_1367 7dc8313cd1210a6ae916f56e3ae5d19c 367 SUPERFAMILY SSF52540 23 233 3.41E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1367 7dc8313cd1210a6ae916f56e3ae5d19c 367 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_1367 7dc8313cd1210a6ae916f56e3ae5d19c 367 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 15 363 7.2E-148 T 15-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 XDD1_1367 7dc8313cd1210a6ae916f56e3ae5d19c 367 Gene3D G3DSA:2.40.50.100 302 364 1.0E-12 T 15-10-2018 XDD1_1367 7dc8313cd1210a6ae916f56e3ae5d19c 367 SMART SM00382 36 219 2.2E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1367 7dc8313cd1210a6ae916f56e3ae5d19c 367 Gene3D G3DSA:3.40.50.300 18 244 2.0E-56 T 15-10-2018 XDD1_1367 7dc8313cd1210a6ae916f56e3ae5d19c 367 Pfam PF03459 TOBE domain 303 360 6.1E-14 T 15-10-2018 IPR005116 Transport-associated OB, type 1 XDD1_1367 7dc8313cd1210a6ae916f56e3ae5d19c 367 SUPERFAMILY SSF50331 249 363 6.02E-20 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal XDD1_1367 7dc8313cd1210a6ae916f56e3ae5d19c 367 Pfam PF00005 ABC transporter 30 169 7.1E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_3555 eabd1198e34624cf8c4f3e26f51447d8 324 SUPERFAMILY SSF51735 115 286 6.95E-38 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_3555 eabd1198e34624cf8c4f3e26f51447d8 324 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 323 3.7E-133 T 15-10-2018 IPR014188 Acrylyl-CoA reductase AcuI XDD1_3555 eabd1198e34624cf8c4f3e26f51447d8 324 SMART SM00829 7 321 0.0081 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XDD1_3555 eabd1198e34624cf8c4f3e26f51447d8 324 Pfam PF00107 Zinc-binding dehydrogenase 157 275 4.8E-16 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XDD1_3555 eabd1198e34624cf8c4f3e26f51447d8 324 Gene3D G3DSA:3.90.180.10 15 322 2.0E-121 T 15-10-2018 XDD1_3555 eabd1198e34624cf8c4f3e26f51447d8 324 Gene3D G3DSA:3.40.50.720 124 291 2.0E-121 T 15-10-2018 XDD1_3555 eabd1198e34624cf8c4f3e26f51447d8 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 85 4.0E-5 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XDD1_3555 eabd1198e34624cf8c4f3e26f51447d8 324 SUPERFAMILY SSF50129 1 143 2.28E-43 T 15-10-2018 IPR011032 GroES-like superfamily XDD1_1084 685be26bce5d98a20faaadd8843e18f4 179 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 71 175 1.7E-40 T 15-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 XDD1_1084 685be26bce5d98a20faaadd8843e18f4 179 Pfam PF11072 Protein of unknown function (DUF2859) 32 172 1.1E-51 T 15-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 XDD1_0665 4a7d09815ef732bf8fd2f71af463702e 502 SUPERFAMILY SSF53187 179 495 2.04E-125 T 15-10-2018 XDD1_0665 4a7d09815ef732bf8fd2f71af463702e 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 2.3E-54 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XDD1_0665 4a7d09815ef732bf8fd2f71af463702e 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 2.3E-54 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XDD1_0665 4a7d09815ef732bf8fd2f71af463702e 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 2.3E-54 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XDD1_0665 4a7d09815ef732bf8fd2f71af463702e 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 2.3E-54 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XDD1_0665 4a7d09815ef732bf8fd2f71af463702e 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 2.3E-54 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XDD1_0665 4a7d09815ef732bf8fd2f71af463702e 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 4.4E-34 T 15-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XDD1_0665 4a7d09815ef732bf8fd2f71af463702e 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 488 3.8E-125 T 15-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XDD1_0665 4a7d09815ef732bf8fd2f71af463702e 502 Gene3D G3DSA:3.40.220.10 1 159 3.3E-58 T 15-10-2018 XDD1_0665 4a7d09815ef732bf8fd2f71af463702e 502 Gene3D G3DSA:3.40.630.10 181 497 8.2E-141 T 15-10-2018 XDD1_0665 4a7d09815ef732bf8fd2f71af463702e 502 SUPERFAMILY SSF52949 1 184 5.59E-52 T 15-10-2018 XDD1_0665 4a7d09815ef732bf8fd2f71af463702e 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.911 T 15-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 XDD1_0665 4a7d09815ef732bf8fd2f71af463702e 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 15-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XDD1_1235 770b35f56536d885375eaaf79ee2ecde 606 Pfam PF04183 IucA / IucC family 143 393 1.1E-75 T 15-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 XDD1_1235 770b35f56536d885375eaaf79ee2ecde 606 Pfam PF06276 Ferric iron reductase FhuF-like transporter 415 572 5.8E-37 T 15-10-2018 IPR022770 Ferric iron reductase FhuF domain XDD1_1235 770b35f56536d885375eaaf79ee2ecde 606 Gene3D G3DSA:1.10.510.40 382 589 1.8E-64 T 15-10-2018 XDD1_1235 770b35f56536d885375eaaf79ee2ecde 606 Gene3D G3DSA:1.10.274.90 5 133 4.9E-43 T 15-10-2018 XDD1_2975 b55ac4ff73d79182d3d99bd2f098ede8 410 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 296 309 - T 15-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 XDD1_2975 b55ac4ff73d79182d3d99bd2f098ede8 410 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 392 2.5E-132 T 15-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 XDD1_2975 b55ac4ff73d79182d3d99bd2f098ede8 410 SUPERFAMILY SSF51905 4 386 4.73E-60 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_2975 b55ac4ff73d79182d3d99bd2f098ede8 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 1.7E-18 T 15-10-2018 XDD1_2975 b55ac4ff73d79182d3d99bd2f098ede8 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 1.7E-18 T 15-10-2018 XDD1_2975 b55ac4ff73d79182d3d99bd2f098ede8 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.7E-18 T 15-10-2018 XDD1_2975 b55ac4ff73d79182d3d99bd2f098ede8 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 1.7E-18 T 15-10-2018 XDD1_2975 b55ac4ff73d79182d3d99bd2f098ede8 410 Gene3D G3DSA:3.50.50.60 257 409 4.8E-47 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_2975 b55ac4ff73d79182d3d99bd2f098ede8 410 Gene3D G3DSA:3.50.50.60 1 253 4.4E-83 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_2975 b55ac4ff73d79182d3d99bd2f098ede8 410 Pfam PF01494 FAD binding domain 4 345 2.4E-30 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 XDD1_3611 7bc6e2a09513d8506cdc4e0694467a15 196 Pfam PF04222 Protein of unknown function (DUF416) 5 193 5.7E-79 T 15-10-2018 IPR007338 Protein of unknown function DUF416 XDD1_3611 7bc6e2a09513d8506cdc4e0694467a15 196 Gene3D G3DSA:1.20.1590.10 2 196 5.7E-65 T 15-10-2018 IPR023381 YP001051499.1-like domain superfamily XDD1_2169 0c81414d88f30a09c0fd2c4c414a669c 565 SUPERFAMILY SSF52540 335 560 2.81E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2169 0c81414d88f30a09c0fd2c4c414a669c 565 Gene3D G3DSA:1.20.1560.10 3 317 1.2E-49 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_2169 0c81414d88f30a09c0fd2c4c414a669c 565 SMART SM00382 362 548 9.1E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_2169 0c81414d88f30a09c0fd2c4c414a669c 565 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_2169 0c81414d88f30a09c0fd2c4c414a669c 565 Pfam PF00005 ABC transporter 354 501 1.1E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_2169 0c81414d88f30a09c0fd2c4c414a669c 565 SUPERFAMILY SSF90123 7 316 8.76E-51 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_2169 0c81414d88f30a09c0fd2c4c414a669c 565 Pfam PF00664 ABC transporter transmembrane region 18 289 9.2E-30 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XDD1_2169 0c81414d88f30a09c0fd2c4c414a669c 565 Gene3D G3DSA:3.40.50.300 331 565 1.8E-59 T 15-10-2018 XDD1_2438 690aeb7f53ba41e92be3a2bb4e116339 261 Gene3D G3DSA:3.40.50.720 5 258 1.2E-68 T 15-10-2018 XDD1_2438 690aeb7f53ba41e92be3a2bb4e116339 261 SUPERFAMILY SSF51735 8 257 3.16E-65 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2438 690aeb7f53ba41e92be3a2bb4e116339 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.9E-7 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2438 690aeb7f53ba41e92be3a2bb4e116339 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.9E-7 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2438 690aeb7f53ba41e92be3a2bb4e116339 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.9E-7 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2438 690aeb7f53ba41e92be3a2bb4e116339 261 Pfam PF00106 short chain dehydrogenase 8 200 2.5E-56 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2438 690aeb7f53ba41e92be3a2bb4e116339 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XDD1_2438 690aeb7f53ba41e92be3a2bb4e116339 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 236 255 1.6E-41 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 XDD1_2438 690aeb7f53ba41e92be3a2bb4e116339 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 171 194 1.6E-41 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 XDD1_2438 690aeb7f53ba41e92be3a2bb4e116339 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 106 126 1.6E-41 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 XDD1_2438 690aeb7f53ba41e92be3a2bb4e116339 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 86 103 1.6E-41 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 XDD1_2438 690aeb7f53ba41e92be3a2bb4e116339 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 13 30 1.6E-41 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 XDD1_2438 690aeb7f53ba41e92be3a2bb4e116339 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 210 229 1.6E-41 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 XDD1_3227 339d7607c185590e78dc54c3698ebf10 943 SUPERFAMILY SSF52540 1 569 1.7E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3227 339d7607c185590e78dc54c3698ebf10 943 Gene3D G3DSA:3.40.50.300 6 594 3.0E-246 T 15-10-2018 XDD1_3227 339d7607c185590e78dc54c3698ebf10 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 924 0.0 T 15-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 XDD1_3227 339d7607c185590e78dc54c3698ebf10 943 SUPERFAMILY SSF52540 615 912 1.3E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3227 339d7607c185590e78dc54c3698ebf10 943 Gene3D G3DSA:1.20.1580.10 692 830 1.4E-138 T 15-10-2018 XDD1_3227 339d7607c185590e78dc54c3698ebf10 943 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_3227 339d7607c185590e78dc54c3698ebf10 943 Pfam PF00005 ABC transporter 623 860 8.0E-10 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_3227 339d7607c185590e78dc54c3698ebf10 943 Gene3D G3DSA:1.20.1580.10 90 492 3.0E-246 T 15-10-2018 XDD1_3227 339d7607c185590e78dc54c3698ebf10 943 Gene3D G3DSA:1.10.8.280 287 403 3.0E-246 T 15-10-2018 XDD1_3227 339d7607c185590e78dc54c3698ebf10 943 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.971 T 15-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 XDD1_3227 339d7607c185590e78dc54c3698ebf10 943 Gene3D G3DSA:3.30.190.20 130 239 3.0E-246 T 15-10-2018 XDD1_3227 339d7607c185590e78dc54c3698ebf10 943 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_3227 339d7607c185590e78dc54c3698ebf10 943 Gene3D G3DSA:3.40.50.300 617 936 1.4E-138 T 15-10-2018 XDD1_3078 0b33499b1cf266a8b6e7a50bf1257e66 808 SMART SM00885 369 495 6.7E-13 T 15-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XDD1_3078 0b33499b1cf266a8b6e7a50bf1257e66 808 Pfam PF08706 D5 N terminal like 370 497 3.3E-9 T 15-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XDD1_3078 0b33499b1cf266a8b6e7a50bf1257e66 808 Pfam PF13362 Toprim domain 218 323 2.1E-11 T 15-10-2018 IPR006171 TOPRIM domain XDD1_3078 0b33499b1cf266a8b6e7a50bf1257e66 808 Gene3D G3DSA:1.10.10.10 703 801 4.5E-38 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3078 0b33499b1cf266a8b6e7a50bf1257e66 808 Pfam PF03288 Poxvirus D5 protein-like 703 798 3.5E-18 T 15-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal XDD1_3078 0b33499b1cf266a8b6e7a50bf1257e66 808 Gene3D G3DSA:3.40.1360.10 208 333 6.3E-5 T 15-10-2018 XDD1_3078 0b33499b1cf266a8b6e7a50bf1257e66 808 SUPERFAMILY SSF52540 513 674 1.3E-10 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3078 0b33499b1cf266a8b6e7a50bf1257e66 808 Gene3D G3DSA:3.40.50.300 492 666 2.2E-7 T 15-10-2018 XDD1_3078 0b33499b1cf266a8b6e7a50bf1257e66 808 SUPERFAMILY SSF46785 704 801 7.34E-37 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3078 0b33499b1cf266a8b6e7a50bf1257e66 808 SMART SM00778 50 89 2.9E-10 T 15-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 XDD1_3078 0b33499b1cf266a8b6e7a50bf1257e66 808 Pfam PF08273 Zinc-binding domain of primase-helicase 50 89 3.7E-10 T 15-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 XDD1_3078 0b33499b1cf266a8b6e7a50bf1257e66 808 SUPERFAMILY SSF57783 49 119 5.87E-9 T 15-10-2018 XDD1_2702 b72e7dd199a08163215658e631ac57cf 304 Gene3D G3DSA:3.30.1400.10 164 303 5.0E-54 T 15-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 XDD1_2702 b72e7dd199a08163215658e631ac57cf 304 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 298 24.798 T 15-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 XDD1_2702 b72e7dd199a08163215658e631ac57cf 304 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 4 296 2.2E-84 T 15-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 XDD1_2702 b72e7dd199a08163215658e631ac57cf 304 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 169 295 3.8E-49 T 15-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 XDD1_2702 b72e7dd199a08163215658e631ac57cf 304 SMART SM00771 166 296 1.6E-73 T 15-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 XDD1_2702 b72e7dd199a08163215658e631ac57cf 304 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 169 297 6.0E-62 T 15-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 XDD1_2702 b72e7dd199a08163215658e631ac57cf 304 SUPERFAMILY SSF64383 167 298 6.41E-47 T 15-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 XDD1_0031 278026ba52c502332048223f36f124b5 461 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 358 387 0.0024 T 15-10-2018 IPR001451 Hexapeptide repeat XDD1_0031 278026ba52c502332048223f36f124b5 461 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 273 304 2.6E-5 T 15-10-2018 IPR001451 Hexapeptide repeat XDD1_0031 278026ba52c502332048223f36f124b5 461 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 400 434 2.5E-6 T 15-10-2018 IPR001451 Hexapeptide repeat XDD1_0031 278026ba52c502332048223f36f124b5 461 Gene3D G3DSA:2.160.10.10 233 461 1.8E-72 T 15-10-2018 XDD1_0031 278026ba52c502332048223f36f124b5 461 Gene3D G3DSA:3.90.550.10 7 232 1.2E-69 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_0031 278026ba52c502332048223f36f124b5 461 SUPERFAMILY SSF53448 12 257 9.18E-67 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_0031 278026ba52c502332048223f36f124b5 461 SUPERFAMILY SSF51161 224 459 1.68E-51 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily XDD1_0031 278026ba52c502332048223f36f124b5 461 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 10 457 43.102 T 15-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 XDD1_0031 278026ba52c502332048223f36f124b5 461 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 12 460 2.6E-205 T 15-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 XDD1_0031 278026ba52c502332048223f36f124b5 461 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 408 436 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XDD1_0031 278026ba52c502332048223f36f124b5 461 Pfam PF12804 MobA-like NTP transferase domain 13 126 2.3E-20 T 15-10-2018 IPR025877 MobA-like NTP transferase XDD1_2495 031e49cc70f4f97d1695f3f57927ade1 116 PRINTS PR00332 Histidine triad family signature 27 45 8.4E-20 T 15-10-2018 IPR001310 Histidine triad (HIT) protein XDD1_2495 031e49cc70f4f97d1695f3f57927ade1 116 PRINTS PR00332 Histidine triad family signature 95 105 8.4E-20 T 15-10-2018 IPR001310 Histidine triad (HIT) protein XDD1_2495 031e49cc70f4f97d1695f3f57927ade1 116 PRINTS PR00332 Histidine triad family signature 6 22 8.4E-20 T 15-10-2018 IPR001310 Histidine triad (HIT) protein XDD1_2495 031e49cc70f4f97d1695f3f57927ade1 116 Pfam PF01230 HIT domain 12 109 1.2E-29 T 15-10-2018 IPR001310 Histidine triad (HIT) protein XDD1_2495 031e49cc70f4f97d1695f3f57927ade1 116 Gene3D G3DSA:3.30.428.10 1 111 5.2E-35 T 15-10-2018 IPR036265 HIT-like superfamily XDD1_2495 031e49cc70f4f97d1695f3f57927ade1 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 15-10-2018 IPR019808 Histidine triad, conserved site XDD1_2495 031e49cc70f4f97d1695f3f57927ade1 116 SUPERFAMILY SSF54197 2 112 1.23E-35 T 15-10-2018 IPR036265 HIT-like superfamily XDD1_2085 961f85fb8dc14de9e37153fb8416b7e1 378 SUPERFAMILY SSF47819 296 372 4.27E-21 T 15-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 XDD1_2085 961f85fb8dc14de9e37153fb8416b7e1 378 SUPERFAMILY SSF53098 2 210 2.82E-64 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_2085 961f85fb8dc14de9e37153fb8416b7e1 378 Pfam PF01612 3'-5' exonuclease 3 169 1.0E-38 T 15-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 XDD1_2085 961f85fb8dc14de9e37153fb8416b7e1 378 Pfam PF00570 HRDC domain 213 279 5.6E-16 T 15-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 XDD1_2085 961f85fb8dc14de9e37153fb8416b7e1 378 Gene3D G3DSA:1.10.150.80 294 375 7.3E-29 T 15-10-2018 XDD1_2085 961f85fb8dc14de9e37153fb8416b7e1 378 SMART SM00341 210 289 1.1E-17 T 15-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 XDD1_2085 961f85fb8dc14de9e37153fb8416b7e1 378 TIGRFAM TIGR01388 rnd: ribonuclease D 5 366 1.2E-139 T 15-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 XDD1_2085 961f85fb8dc14de9e37153fb8416b7e1 378 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 43.928 T 15-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 XDD1_2085 961f85fb8dc14de9e37153fb8416b7e1 378 Gene3D G3DSA:1.10.150.80 195 293 1.6E-22 T 15-10-2018 XDD1_2085 961f85fb8dc14de9e37153fb8416b7e1 378 SUPERFAMILY SSF47819 196 301 1.64E-28 T 15-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 XDD1_2085 961f85fb8dc14de9e37153fb8416b7e1 378 SMART SM00474 3 171 4.2E-41 T 15-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 XDD1_2085 961f85fb8dc14de9e37153fb8416b7e1 378 Gene3D G3DSA:3.30.420.10 1 194 3.4E-66 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_0992 83333ce24d669ef084f9f643a0396e92 484 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 70 94 - T 15-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 XDD1_0992 83333ce24d669ef084f9f643a0396e92 484 Pfam PF00854 POT family 82 441 6.8E-90 T 15-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 XDD1_0992 83333ce24d669ef084f9f643a0396e92 484 Hamap MF_01879 Dipeptide and tripeptide permease B [dtpB]. 3 484 43.742 T 15-10-2018 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B XDD1_0992 83333ce24d669ef084f9f643a0396e92 484 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 482 1.6E-176 T 15-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 XDD1_0992 83333ce24d669ef084f9f643a0396e92 484 Gene3D G3DSA:1.20.1250.20 7 482 1.5E-113 T 15-10-2018 XDD1_0992 83333ce24d669ef084f9f643a0396e92 484 SUPERFAMILY SSF103473 10 479 3.79E-25 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0992 83333ce24d669ef084f9f643a0396e92 484 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 145 157 - T 15-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 XDD1_1339 6266ab4468c6cfc024dfe85dc41e890e 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 9.8E-37 T 15-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 XDD1_1339 6266ab4468c6cfc024dfe85dc41e890e 115 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 103 4.4E-6 T 15-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_1339 6266ab4468c6cfc024dfe85dc41e890e 115 PIRSF PIRSF000169 1 115 6.0E-42 T 15-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 XDD1_1339 6266ab4468c6cfc024dfe85dc41e890e 115 SUPERFAMILY SSF81343 5 114 6.76E-29 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_1339 6266ab4468c6cfc024dfe85dc41e890e 115 Gene3D G3DSA:1.20.1300.10 1 115 6.3E-31 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_1915 f8be8d0540f498c0791b1a0479143c3b 209 SUPERFAMILY SSF102114 24 92 2.75E-8 T 15-10-2018 XDD1_1915 f8be8d0540f498c0791b1a0479143c3b 209 Gene3D G3DSA:3.20.20.70 11 160 1.7E-21 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_1915 f8be8d0540f498c0791b1a0479143c3b 209 Pfam PF13353 4Fe-4S single cluster domain 16 145 8.6E-27 T 15-10-2018 XDD1_1915 f8be8d0540f498c0791b1a0479143c3b 209 Pfam PF04055 Radical SAM superfamily 25 100 3.2E-7 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 Gene3D G3DSA:2.60.40.10 834 899 3.4E-26 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 226 344 8.7E-14 T 15-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 348 779 2.7E-112 T 15-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 SUPERFAMILY SSF49384 39 209 3.77E-60 T 15-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 Gene3D G3DSA:3.20.20.80 346 833 8.0E-166 T 15-10-2018 XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 SMART SM01081 46 207 7.5E-84 T 15-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 SUPERFAMILY SSF81296 797 899 2.66E-35 T 15-10-2018 IPR014756 Immunoglobulin E-set XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 PRINTS PR00738 Glycosyl hydrolase family 20 signature 743 759 2.6E-44 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 PRINTS PR00738 Glycosyl hydrolase family 20 signature 761 778 2.6E-44 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 PRINTS PR00738 Glycosyl hydrolase family 20 signature 342 359 2.6E-44 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 PRINTS PR00738 Glycosyl hydrolase family 20 signature 448 465 2.6E-44 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 PRINTS PR00738 Glycosyl hydrolase family 20 signature 542 555 2.6E-44 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 PRINTS PR00738 Glycosyl hydrolase family 20 signature 515 533 2.6E-44 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 PRINTS PR00738 Glycosyl hydrolase family 20 signature 308 328 2.6E-44 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 PRINTS PR00738 Glycosyl hydrolase family 20 signature 371 392 2.6E-44 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 820 896 2.4E-30 T 15-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 SUPERFAMILY SSF55545 215 347 9.55E-25 T 15-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 Gene3D G3DSA:3.30.379.10 220 345 1.3E-23 T 15-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 Gene3D G3DSA:2.60.40.290 38 179 4.1E-53 T 15-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 Pfam PF03173 Putative carbohydrate binding domain 47 206 2.3E-62 T 15-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 XDD1_1301 8813e135dfb0c95d9913a6aae111824a 901 SUPERFAMILY SSF51445 348 787 2.6E-139 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily XDD1_2381 4521579c41346420410a8d4d9347fdbb 70 PRINTS PR00050 Cold shock protein signature 7 22 7.7E-18 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XDD1_2381 4521579c41346420410a8d4d9347fdbb 70 PRINTS PR00050 Cold shock protein signature 28 37 7.7E-18 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XDD1_2381 4521579c41346420410a8d4d9347fdbb 70 PRINTS PR00050 Cold shock protein signature 43 61 7.7E-18 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XDD1_2381 4521579c41346420410a8d4d9347fdbb 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 15-10-2018 IPR019844 Cold-shock conserved site XDD1_2381 4521579c41346420410a8d4d9347fdbb 70 SUPERFAMILY SSF50249 4 69 1.22E-25 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_2381 4521579c41346420410a8d4d9347fdbb 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 2.3E-33 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XDD1_2381 4521579c41346420410a8d4d9347fdbb 70 Gene3D G3DSA:2.40.50.140 2 70 1.0E-31 T 15-10-2018 XDD1_2381 4521579c41346420410a8d4d9347fdbb 70 PIRSF PIRSF002599 1 70 8.0E-26 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 XDD1_2381 4521579c41346420410a8d4d9347fdbb 70 SMART SM00357 6 70 6.9E-31 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 XDD1_0474 cad803c677d4402626ec31e5ca683c6b 445 Gene3D G3DSA:3.30.310.50 370 445 3.2E-26 T 15-10-2018 XDD1_0474 cad803c677d4402626ec31e5ca683c6b 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 442 1.6E-198 T 15-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0474 cad803c677d4402626ec31e5ca683c6b 445 Gene3D G3DSA:3.40.120.10 3 154 5.5E-49 T 15-10-2018 XDD1_0474 cad803c677d4402626ec31e5ca683c6b 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 1.2E-45 T 15-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0474 cad803c677d4402626ec31e5ca683c6b 445 SUPERFAMILY SSF53738 258 365 7.06E-31 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0474 cad803c677d4402626ec31e5ca683c6b 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 444 48.208 T 15-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0474 cad803c677d4402626ec31e5ca683c6b 445 Gene3D G3DSA:3.40.120.10 257 339 1.5E-64 T 15-10-2018 XDD1_0474 cad803c677d4402626ec31e5ca683c6b 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 1.4E-15 T 15-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0474 cad803c677d4402626ec31e5ca683c6b 445 SUPERFAMILY SSF53738 2 181 8.63E-49 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0474 cad803c677d4402626ec31e5ca683c6b 445 SUPERFAMILY SSF53738 156 255 4.71E-30 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0474 cad803c677d4402626ec31e5ca683c6b 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 15-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0474 cad803c677d4402626ec31e5ca683c6b 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.0E-12 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0474 cad803c677d4402626ec31e5ca683c6b 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.0E-12 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0474 cad803c677d4402626ec31e5ca683c6b 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 1.0E-12 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0474 cad803c677d4402626ec31e5ca683c6b 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 364 3.5E-32 T 15-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0474 cad803c677d4402626ec31e5ca683c6b 445 SUPERFAMILY SSF55957 357 444 6.54E-23 T 15-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0474 cad803c677d4402626ec31e5ca683c6b 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 2.9E-19 T 15-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0474 cad803c677d4402626ec31e5ca683c6b 445 Gene3D G3DSA:3.40.120.10 174 362 1.5E-64 T 15-10-2018 XDD1_0915 0f147fcc4eb77fa9829b546dfea62533 571 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 294 1.5E-74 T 15-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 XDD1_0915 0f147fcc4eb77fa9829b546dfea62533 571 Pfam PF02254 TrkA-N domain 421 533 4.2E-23 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 XDD1_0915 0f147fcc4eb77fa9829b546dfea62533 571 SUPERFAMILY SSF51735 418 547 1.86E-26 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0915 0f147fcc4eb77fa9829b546dfea62533 571 Gene3D G3DSA:1.20.1530.20 7 398 8.9E-79 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily XDD1_0915 0f147fcc4eb77fa9829b546dfea62533 571 Gene3D G3DSA:3.40.50.720 417 553 5.4E-28 T 15-10-2018 XDD1_0915 0f147fcc4eb77fa9829b546dfea62533 571 Pfam PF00999 Sodium/hydrogen exchanger family 14 384 3.3E-79 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 XDD1_0449 bae0eff48e26198d404055c7283d3c7d 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.068 T 15-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XDD1_0449 bae0eff48e26198d404055c7283d3c7d 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 15-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XDD1_0449 bae0eff48e26198d404055c7283d3c7d 176 Pfam PF00719 Inorganic pyrophosphatase 18 172 1.0E-54 T 15-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XDD1_0449 bae0eff48e26198d404055c7283d3c7d 176 SUPERFAMILY SSF50324 3 173 2.09E-67 T 15-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XDD1_0449 bae0eff48e26198d404055c7283d3c7d 176 Gene3D G3DSA:3.90.80.10 2 176 4.7E-70 T 15-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XDD1_0746 985aff8c4d98e9b01e122d387621ba29 221 Gene3D G3DSA:3.30.980.10 93 218 1.1E-16 T 15-10-2018 XDD1_0746 985aff8c4d98e9b01e122d387621ba29 221 SUPERFAMILY SSF55186 93 210 1.06E-22 T 15-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 XDD1_0746 985aff8c4d98e9b01e122d387621ba29 221 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 174 209 3.3E-5 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 XDD1_0746 985aff8c4d98e9b01e122d387621ba29 221 SUPERFAMILY SSF50447 8 81 3.88E-14 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XDD1_0746 985aff8c4d98e9b01e122d387621ba29 221 Gene3D G3DSA:2.40.30.130 9 88 2.0E-16 T 15-10-2018 XDD1_2818 8d214a0cbca137be74f5aae089e618ed 446 SMART SM00487 23 225 6.7E-59 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XDD1_2818 8d214a0cbca137be74f5aae089e618ed 446 Gene3D G3DSA:3.40.50.300 223 388 3.2E-49 T 15-10-2018 XDD1_2818 8d214a0cbca137be74f5aae089e618ed 446 Gene3D G3DSA:3.40.50.300 1 222 1.3E-70 T 15-10-2018 XDD1_2818 8d214a0cbca137be74f5aae089e618ed 446 SMART SM00490 262 343 5.0E-29 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_2818 8d214a0cbca137be74f5aae089e618ed 446 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 428 49.201 T 15-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 XDD1_2818 8d214a0cbca137be74f5aae089e618ed 446 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site XDD1_2818 8d214a0cbca137be74f5aae089e618ed 446 SUPERFAMILY SSF52540 41 383 6.76E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2818 8d214a0cbca137be74f5aae089e618ed 446 SUPERFAMILY SSF52540 3 211 3.38E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2818 8d214a0cbca137be74f5aae089e618ed 446 Pfam PF00270 DEAD/DEAH box helicase 28 197 6.0E-46 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XDD1_2818 8d214a0cbca137be74f5aae089e618ed 446 Pfam PF00271 Helicase conserved C-terminal domain 235 343 1.3E-28 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_2137 53b7092ce4c16391fdf634b4e617a564 259 SUPERFAMILY SSF53335 21 215 4.41E-32 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_2137 53b7092ce4c16391fdf634b4e617a564 259 Pfam PF08241 Methyltransferase domain 40 135 2.0E-19 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 XDD1_2137 53b7092ce4c16391fdf634b4e617a564 259 Gene3D G3DSA:3.40.50.150 5 256 2.9E-34 T 15-10-2018 XDD1_1626 be3453add9807d54e2800e9188a79cf3 1575 SMART SM00869 1294 1560 1.7E-30 T 15-10-2018 IPR005546 Autotransporter beta-domain XDD1_1626 be3453add9807d54e2800e9188a79cf3 1575 Pfam PF12951 Passenger-associated-transport-repeat 961 985 9.3E-4 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat XDD1_1626 be3453add9807d54e2800e9188a79cf3 1575 Pfam PF12951 Passenger-associated-transport-repeat 586 619 0.48 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat XDD1_1626 be3453add9807d54e2800e9188a79cf3 1575 Pfam PF12951 Passenger-associated-transport-repeat 451 476 4.4E-7 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat XDD1_1626 be3453add9807d54e2800e9188a79cf3 1575 Pfam PF12951 Passenger-associated-transport-repeat 1026 1053 1.4E-5 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat XDD1_1626 be3453add9807d54e2800e9188a79cf3 1575 Pfam PF12951 Passenger-associated-transport-repeat 519 546 0.15 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat XDD1_1626 be3453add9807d54e2800e9188a79cf3 1575 Pfam PF12951 Passenger-associated-transport-repeat 661 689 1.9E-4 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat XDD1_1626 be3453add9807d54e2800e9188a79cf3 1575 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1102 1575 1.7E-82 T 15-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 XDD1_1626 be3453add9807d54e2800e9188a79cf3 1575 Pfam PF03212 Pertactin 1105 1213 6.1E-8 T 15-10-2018 IPR004899 Pertactin, central region XDD1_1626 be3453add9807d54e2800e9188a79cf3 1575 Gene3D G3DSA:2.40.128.130 1240 1575 1.1E-55 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily XDD1_1626 be3453add9807d54e2800e9188a79cf3 1575 SUPERFAMILY SSF51126 423 784 1.19E-15 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor XDD1_1626 be3453add9807d54e2800e9188a79cf3 1575 Gene3D G3DSA:2.160.20.20 1057 1217 5.7E-45 T 15-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily XDD1_1626 be3453add9807d54e2800e9188a79cf3 1575 Pfam PF03797 Autotransporter beta-domain 1297 1545 3.1E-42 T 15-10-2018 IPR005546 Autotransporter beta-domain XDD1_1626 be3453add9807d54e2800e9188a79cf3 1575 SUPERFAMILY SSF51126 796 1215 1.38E-41 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor XDD1_1626 be3453add9807d54e2800e9188a79cf3 1575 SUPERFAMILY SSF103515 1263 1575 2.75E-34 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily XDD1_1626 be3453add9807d54e2800e9188a79cf3 1575 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 661 689 1.9E-5 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat XDD1_1626 be3453add9807d54e2800e9188a79cf3 1575 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1026 1054 4.0E-7 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat XDD1_1626 be3453add9807d54e2800e9188a79cf3 1575 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 447 477 5.4E-10 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat XDD1_1626 be3453add9807d54e2800e9188a79cf3 1575 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 962 986 1.1E-4 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat XDD1_3263 23dbfc32e07e6a846a32586d8e9d8d1e 457 PIRSF PIRSF000726 9 457 6.2E-143 T 15-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XDD1_3263 23dbfc32e07e6a846a32586d8e9d8d1e 457 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 10 456 2.8E-130 T 15-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XDD1_3263 23dbfc32e07e6a846a32586d8e9d8d1e 457 Gene3D G3DSA:3.30.70.260 310 454 2.1E-47 T 15-10-2018 XDD1_3263 23dbfc32e07e6a846a32586d8e9d8d1e 457 ProSitePatterns PS00324 Aspartokinase signature. 13 21 - T 15-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XDD1_3263 23dbfc32e07e6a846a32586d8e9d8d1e 457 SUPERFAMILY SSF55021 383 456 2.8E-13 T 15-10-2018 XDD1_3263 23dbfc32e07e6a846a32586d8e9d8d1e 457 SUPERFAMILY SSF53633 11 299 1.3E-72 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XDD1_3263 23dbfc32e07e6a846a32586d8e9d8d1e 457 Pfam PF00696 Amino acid kinase family 11 284 8.9E-47 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XDD1_3263 23dbfc32e07e6a846a32586d8e9d8d1e 457 Gene3D G3DSA:3.40.1160.10 13 296 2.3E-101 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XDD1_3263 23dbfc32e07e6a846a32586d8e9d8d1e 457 Gene3D G3DSA:3.30.70.260 316 390 2.1E-47 T 15-10-2018 XDD1_3263 23dbfc32e07e6a846a32586d8e9d8d1e 457 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 11 456 1.4E-136 T 15-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XDD1_3263 23dbfc32e07e6a846a32586d8e9d8d1e 457 Gene3D G3DSA:1.20.120.1320 49 141 2.3E-101 T 15-10-2018 XDD1_3263 23dbfc32e07e6a846a32586d8e9d8d1e 457 SUPERFAMILY SSF55021 304 400 4.25E-17 T 15-10-2018 XDD1_0888 01703c9db08b55b24b92eb92b84416ae 589 Pfam PF00664 ABC transporter transmembrane region 27 296 4.1E-40 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XDD1_0888 01703c9db08b55b24b92eb92b84416ae 589 Pfam PF00005 ABC transporter 359 507 5.7E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_0888 01703c9db08b55b24b92eb92b84416ae 589 SUPERFAMILY SSF90123 14 327 1.22E-68 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_0888 01703c9db08b55b24b92eb92b84416ae 589 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_0888 01703c9db08b55b24b92eb92b84416ae 589 SMART SM00382 368 553 2.6E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0888 01703c9db08b55b24b92eb92b84416ae 589 SUPERFAMILY SSF52540 339 578 3.03E-80 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0888 01703c9db08b55b24b92eb92b84416ae 589 Gene3D G3DSA:1.20.1560.10 1 331 1.3E-74 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_0888 01703c9db08b55b24b92eb92b84416ae 589 Gene3D G3DSA:3.40.50.300 334 587 7.2E-83 T 15-10-2018 XDD1_1866 f3f7c41a55df3062199109a846bf5241 217 Gene3D G3DSA:2.30.110.10 19 217 2.3E-75 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 XDD1_1866 f3f7c41a55df3062199109a846bf5241 217 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 177 217 1.2E-17 T 15-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XDD1_1866 f3f7c41a55df3062199109a846bf5241 217 PIRSF PIRSF000190 1 217 1.9E-79 T 15-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XDD1_1866 f3f7c41a55df3062199109a846bf5241 217 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 217 9.7E-90 T 15-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XDD1_1866 f3f7c41a55df3062199109a846bf5241 217 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 187 200 - T 15-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XDD1_1866 f3f7c41a55df3062199109a846bf5241 217 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 38 122 9.8E-23 T 15-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XDD1_1866 f3f7c41a55df3062199109a846bf5241 217 SUPERFAMILY SSF50475 20 217 4.11E-65 T 15-10-2018 XDD1_1866 f3f7c41a55df3062199109a846bf5241 217 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 15 217 36.763 T 15-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XDD1_p0005 8c064e0bdb62e560e05642b46aae1ffc 386 SUPERFAMILY SSF56349 116 386 6.83E-11 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XDD1_p0005 8c064e0bdb62e560e05642b46aae1ffc 386 Gene3D G3DSA:1.10.443.10 208 386 3.7E-12 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XDD1_1880 ccfa246adeaf3bd6de355c1042ee8ff5 359 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 56 341 8.2E-133 T 15-10-2018 IPR006507 Uncharacterised protein family UPF0283 XDD1_1880 ccfa246adeaf3bd6de355c1042ee8ff5 359 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 347 39.216 T 15-10-2018 IPR006507 Uncharacterised protein family UPF0283 XDD1_1880 ccfa246adeaf3bd6de355c1042ee8ff5 359 Pfam PF05128 Domain of unknown function (DUF697) 182 341 6.7E-56 T 15-10-2018 IPR021147 Protein of unknown function DUF697 XDD1_0814 46190883358fba128ca17727a182d28a 656 ProSitePatterns PS00785 5'-nucleotidase signature 1. 26 38 - T 15-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0814 46190883358fba128ca17727a182d28a 656 Gene3D G3DSA:3.60.21.10 17 356 1.0E-135 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like XDD1_0814 46190883358fba128ca17727a182d28a 656 PRINTS PR01607 Apyrase family signature 217 234 9.1E-32 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0814 46190883358fba128ca17727a182d28a 656 PRINTS PR01607 Apyrase family signature 285 305 9.1E-32 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0814 46190883358fba128ca17727a182d28a 656 PRINTS PR01607 Apyrase family signature 245 268 9.1E-32 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0814 46190883358fba128ca17727a182d28a 656 PRINTS PR01607 Apyrase family signature 430 453 9.1E-32 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0814 46190883358fba128ca17727a182d28a 656 PRINTS PR01607 Apyrase family signature 24 42 9.1E-32 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0814 46190883358fba128ca17727a182d28a 656 PRINTS PR01607 Apyrase family signature 532 551 9.1E-32 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0814 46190883358fba128ca17727a182d28a 656 Pfam PF00149 Calcineurin-like phosphoesterase 26 261 9.4E-10 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 XDD1_0814 46190883358fba128ca17727a182d28a 656 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 24 648 0.0 T 15-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 XDD1_0814 46190883358fba128ca17727a182d28a 656 Gene3D G3DSA:3.90.780.10 416 591 1.5E-49 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0814 46190883358fba128ca17727a182d28a 656 SUPERFAMILY SSF56300 21 354 5.69E-83 T 15-10-2018 XDD1_0814 46190883358fba128ca17727a182d28a 656 SUPERFAMILY SSF55816 358 599 1.83E-36 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0814 46190883358fba128ca17727a182d28a 656 Pfam PF02872 5'-nucleotidase, C-terminal domain 358 552 3.3E-20 T 15-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_3421 196701f3de14a6f58751c0f3d6a4021c 545 Gene3D G3DSA:2.40.50.230 257 342 2.6E-5 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XDD1_3421 196701f3de14a6f58751c0f3d6a4021c 545 SUPERFAMILY SSF69255 253 343 3.92E-15 T 15-10-2018 XDD1_3421 196701f3de14a6f58751c0f3d6a4021c 545 SUPERFAMILY SSF69349 334 492 6.98E-9 T 15-10-2018 XDD1_2933 b67d78c38bd9320914080824e046f4b9 540 Pfam PF00501 AMP-binding enzyme 24 445 1.1E-61 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2933 b67d78c38bd9320914080824e046f4b9 540 Gene3D G3DSA:3.40.50.12780 5 440 1.5E-72 T 15-10-2018 XDD1_2933 b67d78c38bd9320914080824e046f4b9 540 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 528 3.2E-12 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2933 b67d78c38bd9320914080824e046f4b9 540 Gene3D G3DSA:3.30.300.310 441 540 6.4E-26 T 15-10-2018 XDD1_2933 b67d78c38bd9320914080824e046f4b9 540 SUPERFAMILY SSF56801 20 539 6.67E-102 T 15-10-2018 XDD1_0028 f723f897e06b500997567ecf9910fe82 255 Pfam PF13358 DDE superfamily endonuclease 75 219 1.3E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0028 f723f897e06b500997567ecf9910fe82 255 SUPERFAMILY SSF53098 128 228 5.46E-8 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0028 f723f897e06b500997567ecf9910fe82 255 Gene3D G3DSA:3.30.420.470 48 248 3.7E-12 T 15-10-2018 XDD1_0028 f723f897e06b500997567ecf9910fe82 255 Pfam PF13592 Winged helix-turn helix 6 61 3.0E-18 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_3363 31143a7720b0aca5819f5923b5bfbd10 1140 Gene3D G3DSA:1.10.486.10 456 664 3.2E-198 T 15-10-2018 XDD1_3363 31143a7720b0aca5819f5923b5bfbd10 1140 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1137 20.732 T 15-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 XDD1_3363 31143a7720b0aca5819f5923b5bfbd10 1140 SUPERFAMILY SSF52540 360 813 7.75E-105 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3363 31143a7720b0aca5819f5923b5bfbd10 1140 Gene3D G3DSA:1.10.10.160 79 187 4.5E-127 T 15-10-2018 IPR013986 DExx box DNA helicase domain superfamily XDD1_3363 31143a7720b0aca5819f5923b5bfbd10 1140 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1099 0.0 T 15-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 XDD1_3363 31143a7720b0aca5819f5923b5bfbd10 1140 Gene3D G3DSA:3.40.50.300 335 809 3.2E-198 T 15-10-2018 XDD1_3363 31143a7720b0aca5819f5923b5bfbd10 1140 PIRSF PIRSF000980 1 1138 0.0 T 15-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 XDD1_3363 31143a7720b0aca5819f5923b5bfbd10 1140 SUPERFAMILY SSF52980 823 1133 5.36E-84 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 XDD1_3363 31143a7720b0aca5819f5923b5bfbd10 1140 SUPERFAMILY SSF52540 1 347 1.43E-124 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3363 31143a7720b0aca5819f5923b5bfbd10 1140 Gene3D G3DSA:1.10.10.990 867 938 2.0E-24 T 15-10-2018 XDD1_3363 31143a7720b0aca5819f5923b5bfbd10 1140 Gene3D G3DSA:3.40.50.10930 4 315 4.5E-127 T 15-10-2018 XDD1_3363 31143a7720b0aca5819f5923b5bfbd10 1140 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 807 1.1E-298 T 15-10-2018 XDD1_3617 65d8850f50d945dcb91d40f33d5ef93a 261 Gene3D G3DSA:3.40.50.720 2 250 6.1E-97 T 15-10-2018 XDD1_3617 65d8850f50d945dcb91d40f33d5ef93a 261 SUPERFAMILY SSF69572 2 246 3.27E-84 T 15-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 XDD1_3617 65d8850f50d945dcb91d40f33d5ef93a 261 Pfam PF00899 ThiF family 10 243 3.4E-65 T 15-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 XDD1_3755 ec4d3217ac3c75a246ec9b7be01b1cb0 267 SUPERFAMILY SSF46689 211 264 4.93E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3755 ec4d3217ac3c75a246ec9b7be01b1cb0 267 Gene3D G3DSA:1.10.10.60 183 266 2.6E-5 T 15-10-2018 XDD1_3755 ec4d3217ac3c75a246ec9b7be01b1cb0 267 SUPERFAMILY SSF55781 8 142 3.53E-5 T 15-10-2018 XDD1_1530 5f4421c12c71e857d5472960e1f1d4a9 283 Gene3D G3DSA:3.40.50.720 1 278 7.0E-54 T 15-10-2018 XDD1_1530 5f4421c12c71e857d5472960e1f1d4a9 283 Pfam PF01370 NAD dependent epimerase/dehydratase family 11 214 1.6E-6 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 XDD1_1530 5f4421c12c71e857d5472960e1f1d4a9 283 SUPERFAMILY SSF51735 3 274 2.1E-24 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1197 71fbbdc3daf6e2e4283a93bfc7b6c680 167 Gene3D G3DSA:3.90.950.20 1 165 3.1E-59 T 15-10-2018 IPR036653 CinA-like, C-terminal XDD1_1197 71fbbdc3daf6e2e4283a93bfc7b6c680 167 Pfam PF02464 Competence-damaged protein 8 163 2.8E-56 T 15-10-2018 IPR008136 CinA, C-terminal XDD1_1197 71fbbdc3daf6e2e4283a93bfc7b6c680 167 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 161 9.2E-55 T 15-10-2018 IPR008136 CinA, C-terminal XDD1_1197 71fbbdc3daf6e2e4283a93bfc7b6c680 167 SUPERFAMILY SSF142433 9 164 3.01E-54 T 15-10-2018 IPR036653 CinA-like, C-terminal XDD1_1567 98fc815c70cb65c632643d914ce4122b 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 15 279 6.1E-123 T 15-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 XDD1_1567 98fc815c70cb65c632643d914ce4122b 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 15-10-2018 IPR024002 Formate/nitrite transporter, conserved site XDD1_1567 98fc815c70cb65c632643d914ce4122b 285 Gene3D G3DSA:1.20.1080.10 1 268 1.5E-101 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 XDD1_1567 98fc815c70cb65c632643d914ce4122b 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 4.5E-91 T 15-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 XDD1_1567 98fc815c70cb65c632643d914ce4122b 285 Pfam PF01226 Formate/nitrite transporter 16 276 2.8E-76 T 15-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 XDD1_2199 775b22f08455400c82c89c05b48b179d 389 Gene3D G3DSA:1.25.40.10 42 177 1.9E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_2199 775b22f08455400c82c89c05b48b179d 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.036 T 15-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 XDD1_2199 775b22f08455400c82c89c05b48b179d 389 Pfam PF14559 Tetratricopeptide repeat 192 246 1.8E-7 T 15-10-2018 XDD1_2199 775b22f08455400c82c89c05b48b179d 389 SMART SM00028 141 174 130.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XDD1_2199 775b22f08455400c82c89c05b48b179d 389 SMART SM00028 214 247 1.7 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XDD1_2199 775b22f08455400c82c89c05b48b179d 389 SMART SM00028 69 102 97.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XDD1_2199 775b22f08455400c82c89c05b48b179d 389 SMART SM00028 180 213 2.6 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XDD1_2199 775b22f08455400c82c89c05b48b179d 389 SUPERFAMILY SSF48452 109 280 4.74E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_2199 775b22f08455400c82c89c05b48b179d 389 Gene3D G3DSA:1.25.40.10 178 352 7.4E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_2289 08190187d16e9ac3b47927f42a53b538 550 SUPERFAMILY SSF53383 70 536 1.37E-106 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_2289 08190187d16e9ac3b47927f42a53b538 550 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 92 449 1.7E-48 T 15-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 XDD1_2289 08190187d16e9ac3b47927f42a53b538 550 Gene3D G3DSA:3.40.640.10 129 394 6.9E-106 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_2289 08190187d16e9ac3b47927f42a53b538 550 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 25 534 3.3E-231 T 15-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 XDD1_2289 08190187d16e9ac3b47927f42a53b538 550 Gene3D G3DSA:3.90.1150.170 65 530 6.9E-106 T 15-10-2018 XDD1_2648 33d4986136415fe5bf3e0be421878c39 259 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 210 253 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 XDD1_2648 33d4986136415fe5bf3e0be421878c39 259 SUPERFAMILY SSF46689 211 258 2.76E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2648 33d4986136415fe5bf3e0be421878c39 259 SMART SM00342 175 257 2.6E-24 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_2648 33d4986136415fe5bf3e0be421878c39 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 226 241 1.2E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 XDD1_2648 33d4986136415fe5bf3e0be421878c39 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 257 1.2E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 XDD1_2648 33d4986136415fe5bf3e0be421878c39 259 SUPERFAMILY SSF51182 19 191 5.34E-14 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily XDD1_2648 33d4986136415fe5bf3e0be421878c39 259 Gene3D G3DSA:2.60.120.10 6 99 5.9E-9 T 15-10-2018 IPR014710 RmlC-like jelly roll fold XDD1_2648 33d4986136415fe5bf3e0be421878c39 259 Pfam PF12833 Helix-turn-helix domain 181 258 8.1E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_2648 33d4986136415fe5bf3e0be421878c39 259 Pfam PF02311 AraC-like ligand binding domain 30 103 9.4E-6 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 XDD1_2648 33d4986136415fe5bf3e0be421878c39 259 Gene3D G3DSA:1.10.10.60 155 259 1.0E-24 T 15-10-2018 XDD1_3456 5dbfb3316d75738c06c409d8ce66afc6 193 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 87 185 3.4E-30 T 15-10-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 XDD1_3456 5dbfb3316d75738c06c409d8ce66afc6 193 Gene3D G3DSA:1.10.260.40 4 77 4.4E-26 T 15-10-2018 XDD1_3456 5dbfb3316d75738c06c409d8ce66afc6 193 Gene3D G3DSA:2.10.109.10 78 192 2.8E-41 T 15-10-2018 XDD1_3456 5dbfb3316d75738c06c409d8ce66afc6 193 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 12 75 1.9E-23 T 15-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 XDD1_1114 c5cde2b0c4055a2e304ccea0e6277492 689 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 102 581 2.0E-166 T 15-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein XDD1_1114 c5cde2b0c4055a2e304ccea0e6277492 689 SUPERFAMILY SSF69279 270 443 6.29E-43 T 15-10-2018 XDD1_1114 c5cde2b0c4055a2e304ccea0e6277492 689 Gene3D G3DSA:3.30.1920.30 301 364 3.3E-95 T 15-10-2018 XDD1_1114 c5cde2b0c4055a2e304ccea0e6277492 689 Pfam PF05954 Phage late control gene D protein (GPD) 110 407 2.4E-87 T 15-10-2018 XDD1_1114 c5cde2b0c4055a2e304ccea0e6277492 689 Gene3D G3DSA:2.40.50.230 435 534 3.0E-43 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XDD1_1114 c5cde2b0c4055a2e304ccea0e6277492 689 SUPERFAMILY SSF69255 442 529 9.68E-35 T 15-10-2018 XDD1_1114 c5cde2b0c4055a2e304ccea0e6277492 689 Gene3D G3DSA:2.30.110.50 98 408 3.3E-95 T 15-10-2018 XDD1_1114 c5cde2b0c4055a2e304ccea0e6277492 689 Gene3D G3DSA:3.55.50.10 178 269 3.3E-95 T 15-10-2018 XDD1_1114 c5cde2b0c4055a2e304ccea0e6277492 689 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 90 599 3.5E-199 T 15-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset XDD1_1114 c5cde2b0c4055a2e304ccea0e6277492 689 SUPERFAMILY SSF69279 90 265 1.29E-57 T 15-10-2018 XDD1_1114 c5cde2b0c4055a2e304ccea0e6277492 689 SUPERFAMILY SSF69349 520 687 1.1E-35 T 15-10-2018 XDD1_1539 e52db722527d9b6df99692f9fff64520 377 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 15-10-2018 IPR030390 RNA methyltransferase TrmA, active site XDD1_1539 e52db722527d9b6df99692f9fff64520 377 Gene3D G3DSA:3.40.50.150 14 368 2.6E-80 T 15-10-2018 XDD1_1539 e52db722527d9b6df99692f9fff64520 377 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 208 372 6.0E-15 T 15-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 XDD1_1539 e52db722527d9b6df99692f9fff64520 377 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 373 3.2E-196 T 15-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 XDD1_1539 e52db722527d9b6df99692f9fff64520 377 Gene3D G3DSA:3.40.1350.30 56 211 2.6E-80 T 15-10-2018 XDD1_1539 e52db722527d9b6df99692f9fff64520 377 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 15-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site XDD1_1539 e52db722527d9b6df99692f9fff64520 377 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 77.921 T 15-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 XDD1_1539 e52db722527d9b6df99692f9fff64520 377 SUPERFAMILY SSF53335 4 372 1.59E-54 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_1539 e52db722527d9b6df99692f9fff64520 377 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 3 367 2.4E-59 T 15-10-2018 XDD1_0873 9b87374bd72763cd033f6d9b3479c797 107 PIRSF PIRSF003113 1 99 2.1E-32 T 15-10-2018 IPR002634 BolA protein XDD1_0873 9b87374bd72763cd033f6d9b3479c797 107 SUPERFAMILY SSF82657 1 88 3.4E-29 T 15-10-2018 IPR036065 BolA-like superfamily XDD1_0873 9b87374bd72763cd033f6d9b3479c797 107 Gene3D G3DSA:3.30.300.90 1 89 2.9E-34 T 15-10-2018 XDD1_0873 9b87374bd72763cd033f6d9b3479c797 107 Pfam PF01722 BolA-like protein 10 83 1.2E-28 T 15-10-2018 IPR002634 BolA protein XDD1_2694 2a5e9f9c8d0b691cc01f920a1ea64753 421 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 421 172.068 T 15-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 XDD1_2694 2a5e9f9c8d0b691cc01f920a1ea64753 421 Gene3D G3DSA:3.90.1200.10 124 420 1.8E-115 T 15-10-2018 XDD1_2694 2a5e9f9c8d0b691cc01f920a1ea64753 421 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 41 411 2.7E-125 T 15-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 XDD1_2694 2a5e9f9c8d0b691cc01f920a1ea64753 421 SUPERFAMILY SSF56112 9 411 9.28E-83 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily XDD1_2694 2a5e9f9c8d0b691cc01f920a1ea64753 421 PIRSF PIRSF031134 8 421 6.5E-150 T 15-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 XDD1_2694 2a5e9f9c8d0b691cc01f920a1ea64753 421 Gene3D G3DSA:3.30.200.20 8 123 3.5E-37 T 15-10-2018 XDD1_2694 2a5e9f9c8d0b691cc01f920a1ea64753 421 Pfam PF01636 Phosphotransferase enzyme family 40 292 3.2E-23 T 15-10-2018 IPR002575 Aminoglycoside phosphotransferase XDD1_0291 3ac20aa1491186ca9490908459046646 104 SUPERFAMILY SSF50104 4 101 2.71E-33 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily XDD1_0291 3ac20aa1491186ca9490908459046646 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 15-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0291 3ac20aa1491186ca9490908459046646 104 Gene3D G3DSA:2.30.30.30 2 104 2.6E-40 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 XDD1_0291 3ac20aa1491186ca9490908459046646 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 5.6E-24 T 15-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0291 3ac20aa1491186ca9490908459046646 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.0E-39 T 15-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0291 3ac20aa1491186ca9490908459046646 104 SMART SM00739 4 31 0.0044 T 15-10-2018 IPR005824 KOW XDD1_0291 3ac20aa1491186ca9490908459046646 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.076 T 15-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1827 0744df5c3f256b48a472b033576f8723 124 SMART SM00530 17 72 1.6E-15 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_1827 0744df5c3f256b48a472b033576f8723 124 Gene3D G3DSA:1.10.260.40 14 114 2.1E-20 T 15-10-2018 XDD1_1827 0744df5c3f256b48a472b033576f8723 124 Pfam PF01381 Helix-turn-helix 20 71 2.5E-15 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_1827 0744df5c3f256b48a472b033576f8723 124 SUPERFAMILY SSF47413 10 78 4.35E-18 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_1835 0744df5c3f256b48a472b033576f8723 124 SMART SM00530 17 72 1.6E-15 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_1835 0744df5c3f256b48a472b033576f8723 124 Gene3D G3DSA:1.10.260.40 14 114 2.1E-20 T 15-10-2018 XDD1_1835 0744df5c3f256b48a472b033576f8723 124 Pfam PF01381 Helix-turn-helix 20 71 2.5E-15 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_1835 0744df5c3f256b48a472b033576f8723 124 SUPERFAMILY SSF47413 10 78 4.35E-18 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_0591 31fb67d21bbf59f9dfb84c45d2d42783 97 Gene3D G3DSA:3.30.70.240 1 77 3.3E-34 T 15-10-2018 XDD1_0591 31fb67d21bbf59f9dfb84c45d2d42783 97 TIGRFAM TIGR01873 cas_CT1978: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI 3 88 4.9E-39 T 15-10-2018 IPR010152 CRISPR-associated protein Cas2 subtype XDD1_0591 31fb67d21bbf59f9dfb84c45d2d42783 97 Pfam PF09707 CRISPR-associated protein (Cas_Cas2CT1978) 3 88 1.1E-38 T 15-10-2018 IPR010152 CRISPR-associated protein Cas2 subtype XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Gene3D G3DSA:3.30.559.30 1318 1568 3.4E-82 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 SUPERFAMILY SSF56801 2650 3234 8.24E-158 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Gene3D G3DSA:3.30.559.30 2398 2653 1.4E-153 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Gene3D G3DSA:3.30.559.10 1124 1502 3.4E-82 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 SUPERFAMILY SSF47336 3798 3864 7.98E-16 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Gene3D G3DSA:3.30.300.30 886 989 7.4E-38 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 SUPERFAMILY SSF56801 1553 2136 5.89E-156 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 ProSitePatterns PS00455 Putative AMP-binding domain signature. 642 653 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 SUPERFAMILY SSF47336 993 1065 7.85E-16 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Gene3D G3DSA:3.40.50.12780 1582 2000 2.0E-135 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Gene3D G3DSA:3.40.50.12780 480 883 1.9E-142 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 SUPERFAMILY SSF52777 1117 1332 2.56E-29 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2845 2856 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Gene3D G3DSA:3.30.559.10 2214 2588 1.4E-153 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Gene3D G3DSA:3.30.559.10 3343 3709 5.5E-80 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3245 3260 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 SUPERFAMILY SSF56801 449 1014 3.79E-169 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Gene3D G3DSA:3.30.300.30 2002 2110 1.6E-32 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Gene3D G3DSA:3.30.300.30 3105 3209 2.1E-32 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 SUPERFAMILY SSF52777 2208 2414 1.22E-48 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 SUPERFAMILY SSF52777 3525 3765 2.78E-41 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 SUPERFAMILY SSF52777 203 477 2.45E-38 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1613 2032 7.4E-134 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 511 915 6.3E-137 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2715 3135 1.1E-134 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Gene3D G3DSA:3.40.50.12780 2688 3103 2.1E-137 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2147 2162 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Gene3D G3DSA:3.30.559.30 3524 3770 5.5E-80 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 SUPERFAMILY SSF47336 3213 3285 1.57E-16 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Pfam PF13193 AMP-binding enzyme C-terminal domain 899 974 4.3E-13 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Pfam PF13193 AMP-binding enzyme C-terminal domain 3119 3194 4.0E-9 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Pfam PF13193 AMP-binding enzyme C-terminal domain 2016 2096 6.7E-8 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Gene3D G3DSA:1.10.1200.10 990 1071 4.9E-21 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Gene3D G3DSA:1.10.1200.10 2111 2192 8.2E-25 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Pfam PF00668 Condensation domain 1119 1571 1.0E-43 T 15-10-2018 IPR001242 Condensation domain XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Pfam PF00668 Condensation domain 3 469 8.8E-64 T 15-10-2018 IPR001242 Condensation domain XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Pfam PF00668 Condensation domain 3338 3730 3.7E-44 T 15-10-2018 IPR001242 Condensation domain XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Pfam PF00668 Condensation domain 2212 2669 1.4E-111 T 15-10-2018 IPR001242 Condensation domain XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Gene3D G3DSA:1.10.1200.10 3210 3289 7.2E-21 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Pfam PF00550 Phosphopantetheine attachment site 3224 3283 2.4E-8 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Pfam PF00550 Phosphopantetheine attachment site 1004 1063 1.3E-6 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Pfam PF00550 Phosphopantetheine attachment site 3806 3864 4.1E-9 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Pfam PF00550 Phosphopantetheine attachment site 2126 2187 2.5E-12 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 SUPERFAMILY SSF47336 2115 2188 1.19E-18 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Gene3D G3DSA:1.10.1200.10 3801 3873 1.3E-20 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Pfam PF00501 AMP-binding enzyme 1592 2008 1.2E-103 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Pfam PF00501 AMP-binding enzyme 2694 3111 1.3E-104 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Pfam PF00501 AMP-binding enzyme 490 891 5.6E-106 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 SUPERFAMILY SSF52777 1322 1579 1.02E-42 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Gene3D G3DSA:3.30.559.30 204 476 4.0E-45 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 SUPERFAMILY SSF52777 2403 2674 2.67E-63 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 SMART SM00823 Phosphopantetheine attachment site 3803 3871 0.3 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 SMART SM00823 Phosphopantetheine attachment site 3221 3289 0.11 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 SMART SM00823 Phosphopantetheine attachment site 2123 2192 0.0029 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3827 3842 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 Gene3D G3DSA:3.30.559.10 6 175 3.5E-31 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 SUPERFAMILY SSF52777 5 159 8.0E-29 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 SUPERFAMILY SSF52777 3336 3538 3.0E-30 T 15-10-2018 XDD1_2606 56a96dbfa6fb3e4bd216ced1bc0e79f8 3874 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1741 1752 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_3693 1370a5518b9fc2c5c3355fdb7d8e1e91 174 Gene3D G3DSA:3.40.50.300 13 168 1.5E-56 T 15-10-2018 XDD1_3693 1370a5518b9fc2c5c3355fdb7d8e1e91 174 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 12 146 8.0E-47 T 15-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 XDD1_3693 1370a5518b9fc2c5c3355fdb7d8e1e91 174 Gene3D G3DSA:2.20.25.120 56 88 1.5E-56 T 15-10-2018 XDD1_3693 1370a5518b9fc2c5c3355fdb7d8e1e91 174 SUPERFAMILY SSF52540 10 171 5.46E-23 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3693 1370a5518b9fc2c5c3355fdb7d8e1e91 174 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 12 171 2.9E-47 T 15-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 XDD1_2005 9273ef18f807140c745c2e9dd1646d43 290 Gene3D G3DSA:3.40.50.150 85 284 4.8E-61 T 15-10-2018 XDD1_2005 9273ef18f807140c745c2e9dd1646d43 290 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 283 44.527 T 15-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 XDD1_2005 9273ef18f807140c745c2e9dd1646d43 290 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 279 2.4E-87 T 15-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 XDD1_2005 9273ef18f807140c745c2e9dd1646d43 290 SUPERFAMILY SSF53335 3 281 2.35E-61 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_2005 9273ef18f807140c745c2e9dd1646d43 290 Gene3D G3DSA:1.10.8.10 1 84 1.1E-24 T 15-10-2018 XDD1_2005 9273ef18f807140c745c2e9dd1646d43 290 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 285 6.8E-88 T 15-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 XDD1_2005 9273ef18f807140c745c2e9dd1646d43 290 Pfam PF13847 Methyltransferase domain 108 253 4.1E-22 T 15-10-2018 IPR025714 Methyltransferase domain XDD1_2005 9273ef18f807140c745c2e9dd1646d43 290 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 188 194 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XDD1_2726 b18fc2ef7cd7b31ab2bbb87a7df5544d 288 SUPERFAMILY SSF161098 50 272 2.75E-44 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_2726 b18fc2ef7cd7b31ab2bbb87a7df5544d 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 278 1.3E-16 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_2726 b18fc2ef7cd7b31ab2bbb87a7df5544d 288 Gene3D G3DSA:1.10.3720.10 47 280 4.8E-41 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_0781 1435c8d693091f626ad998ac6fcc6a10 238 Gene3D G3DSA:1.10.10.10 123 236 3.8E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0781 1435c8d693091f626ad998ac6fcc6a10 238 SMART SM00862 156 232 3.7E-14 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XDD1_0781 1435c8d693091f626ad998ac6fcc6a10 238 Pfam PF00072 Response regulator receiver domain 6 113 2.6E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_0781 1435c8d693091f626ad998ac6fcc6a10 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 5.8E-18 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XDD1_0781 1435c8d693091f626ad998ac6fcc6a10 238 SUPERFAMILY SSF52172 2 127 1.34E-35 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_0781 1435c8d693091f626ad998ac6fcc6a10 238 Gene3D G3DSA:3.40.50.2300 1 122 3.1E-32 T 15-10-2018 XDD1_0781 1435c8d693091f626ad998ac6fcc6a10 238 SMART SM00448 4 114 3.9E-37 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_0781 1435c8d693091f626ad998ac6fcc6a10 238 SUPERFAMILY SSF46894 136 234 2.72E-20 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XDD1_2499 1a0a1e38ba6307a64af39e72a5711729 341 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 13 336 31.877 T 15-10-2018 IPR003770 Endolytic murein transglycosylase XDD1_2499 1a0a1e38ba6307a64af39e72a5711729 341 Gene3D G3DSA:3.30.160.60 305 341 1.0E-16 T 15-10-2018 XDD1_2499 1a0a1e38ba6307a64af39e72a5711729 341 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 4 339 5.8E-115 T 15-10-2018 IPR003770 Endolytic murein transglycosylase XDD1_2499 1a0a1e38ba6307a64af39e72a5711729 341 Pfam PF02618 YceG-like family 45 330 3.8E-80 T 15-10-2018 IPR003770 Endolytic murein transglycosylase XDD1_2499 1a0a1e38ba6307a64af39e72a5711729 341 Gene3D G3DSA:3.30.160.60 74 112 2.6E-17 T 15-10-2018 XDD1_1028 9d817f0d882afaeccde3b2303b11bed1 149 Pfam PF01047 MarR family 29 86 8.2E-12 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_1028 9d817f0d882afaeccde3b2303b11bed1 149 Gene3D G3DSA:1.10.10.10 1 135 2.3E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1028 9d817f0d882afaeccde3b2303b11bed1 149 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 4 133 1.2E-52 T 15-10-2018 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 XDD1_1028 9d817f0d882afaeccde3b2303b11bed1 149 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 15-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site XDD1_1028 9d817f0d882afaeccde3b2303b11bed1 149 SMART SM00347 22 122 3.8E-24 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_1028 9d817f0d882afaeccde3b2303b11bed1 149 SUPERFAMILY SSF46785 4 134 8.27E-29 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_2787 1f2d916c939b2bdbb1e1b08e1a41d093 404 Gene3D G3DSA:3.90.1150.10 5 376 1.9E-165 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_2787 1f2d916c939b2bdbb1e1b08e1a41d093 404 SUPERFAMILY SSF53383 5 390 4.79E-114 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_2787 1f2d916c939b2bdbb1e1b08e1a41d093 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 15-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site XDD1_2787 1f2d916c939b2bdbb1e1b08e1a41d093 404 Gene3D G3DSA:3.40.640.10 16 262 1.9E-165 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_2787 1f2d916c939b2bdbb1e1b08e1a41d093 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 9.8E-230 T 15-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 XDD1_2787 1f2d916c939b2bdbb1e1b08e1a41d093 404 Pfam PF00266 Aminotransferase class-V 5 368 6.9E-87 T 15-10-2018 IPR000192 Aminotransferase class V domain XDD1_2787 1f2d916c939b2bdbb1e1b08e1a41d093 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.505 T 15-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 XDD1_2787 1f2d916c939b2bdbb1e1b08e1a41d093 404 PIRSF PIRSF005572 2 384 4.7E-138 T 15-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 XDD1_2069 52e647551b574f247fafdeaab64ee8e4 261 SUPERFAMILY SSF81345 3 254 4.71E-39 T 15-10-2018 IPR037294 ABC transporter, BtuC-like XDD1_2069 52e647551b574f247fafdeaab64ee8e4 261 Pfam PF00950 ABC 3 transport family 1 256 1.5E-83 T 15-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 XDD1_2069 52e647551b574f247fafdeaab64ee8e4 261 Gene3D G3DSA:1.10.3470.10 31 261 6.1E-10 T 15-10-2018 IPR037294 ABC transporter, BtuC-like XDD1_1813 82cf3faaee69cd7581441b5b9d97c087 688 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 45 688 1.4E-127 T 15-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 XDD1_1813 82cf3faaee69cd7581441b5b9d97c087 688 Gene3D G3DSA:2.40.170.20 168 688 5.9E-117 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XDD1_1813 82cf3faaee69cd7581441b5b9d97c087 688 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 162 4.0E-22 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain XDD1_1813 82cf3faaee69cd7581441b5b9d97c087 688 Pfam PF00593 TonB dependent receptor 246 686 1.6E-40 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XDD1_1813 82cf3faaee69cd7581441b5b9d97c087 688 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 45 688 2.9E-164 T 15-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 XDD1_1813 82cf3faaee69cd7581441b5b9d97c087 688 Gene3D G3DSA:2.170.130.10 44 167 1.5E-39 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XDD1_1813 82cf3faaee69cd7581441b5b9d97c087 688 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 52 - T 15-10-2018 IPR010916 TonB box, conserved site XDD1_1813 82cf3faaee69cd7581441b5b9d97c087 688 SUPERFAMILY SSF56935 45 688 4.35E-94 T 15-10-2018 XDD1_3062 860fbfa3aff229964f235c2ca1934108 316 SUPERFAMILY SSF53649 2 298 2.18E-15 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 XDD1_3062 860fbfa3aff229964f235c2ca1934108 316 Pfam PF00884 Sulfatase 2 235 3.1E-30 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 XDD1_3062 860fbfa3aff229964f235c2ca1934108 316 Gene3D G3DSA:3.40.720.10 1 307 3.5E-47 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 Gene3D G3DSA:3.30.70.1430 567 662 9.9E-294 T 15-10-2018 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 SUPERFAMILY SSF82866 299 499 2.88E-46 T 15-10-2018 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 SUPERFAMILY SSF82693 565 661 3.66E-16 T 15-10-2018 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 Gene3D G3DSA:3.30.2090.10 188 278 9.9E-294 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 SUPERFAMILY SSF82866 827 1022 1.96E-44 T 15-10-2018 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 Gene3D G3DSA:3.30.2090.10 715 803 9.9E-294 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 SUPERFAMILY SSF82693 676 848 8.89E-7 T 15-10-2018 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 Gene3D G3DSA:1.20.1640.10 513 1019 9.9E-294 T 15-10-2018 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 SUPERFAMILY SSF82693 146 333 3.14E-22 T 15-10-2018 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 SUPERFAMILY SSF82693 49 142 9.94E-23 T 15-10-2018 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 SUPERFAMILY SSF82714 719 801 2.88E-16 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 Gene3D G3DSA:3.30.70.1430 49 811 9.9E-294 T 15-10-2018 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 Gene3D G3DSA:3.30.70.1320 142 335 9.9E-294 T 15-10-2018 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 7.0E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 7.0E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 7.0E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 7.0E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 7.0E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 7.0E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 7.0E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 7.0E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 7.0E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1037 35.935 T 15-10-2018 IPR022831 Multidrug resistance protein MdtB XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 SUPERFAMILY SSF82714 192 276 7.32E-15 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 Gene3D G3DSA:1.20.1640.10 19 512 9.9E-294 T 15-10-2018 XDD1_2455 2bb994a9c5597d888193d0e057985842 1054 Gene3D G3DSA:3.30.70.1440 663 861 9.9E-294 T 15-10-2018 XDD1_3231 383cc86c703800bc3a56b891925c6758 359 TIGRFAM TIGR00492 alr: alanine racemase 3 358 1.4E-138 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3231 383cc86c703800bc3a56b891925c6758 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 7.7E-70 T 15-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3231 383cc86c703800bc3a56b891925c6758 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 15-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3231 383cc86c703800bc3a56b891925c6758 359 Gene3D G3DSA:2.40.37.10 8 352 1.7E-130 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XDD1_3231 383cc86c703800bc3a56b891925c6758 359 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 2.8E-38 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3231 383cc86c703800bc3a56b891925c6758 359 PRINTS PR00992 Alanine racemase signature 60 78 5.0E-72 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3231 383cc86c703800bc3a56b891925c6758 359 PRINTS PR00992 Alanine racemase signature 339 352 5.0E-72 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3231 383cc86c703800bc3a56b891925c6758 359 PRINTS PR00992 Alanine racemase signature 287 304 5.0E-72 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3231 383cc86c703800bc3a56b891925c6758 359 PRINTS PR00992 Alanine racemase signature 192 219 5.0E-72 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3231 383cc86c703800bc3a56b891925c6758 359 PRINTS PR00992 Alanine racemase signature 155 166 5.0E-72 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3231 383cc86c703800bc3a56b891925c6758 359 PRINTS PR00992 Alanine racemase signature 26 42 5.0E-72 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3231 383cc86c703800bc3a56b891925c6758 359 PRINTS PR00992 Alanine racemase signature 120 132 5.0E-72 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3231 383cc86c703800bc3a56b891925c6758 359 PRINTS PR00992 Alanine racemase signature 249 264 5.0E-72 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3231 383cc86c703800bc3a56b891925c6758 359 PRINTS PR00992 Alanine racemase signature 266 281 5.0E-72 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3231 383cc86c703800bc3a56b891925c6758 359 SUPERFAMILY SSF50621 227 357 1.85E-42 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XDD1_3231 383cc86c703800bc3a56b891925c6758 359 SUPERFAMILY SSF51419 8 234 2.49E-69 T 15-10-2018 IPR029066 PLP-binding barrel XDD1_3231 383cc86c703800bc3a56b891925c6758 359 Hamap MF_01201 Alanine racemase. 1 357 34.439 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3231 383cc86c703800bc3a56b891925c6758 359 Gene3D G3DSA:3.20.20.10 10 217 1.7E-130 T 15-10-2018 IPR029066 PLP-binding barrel XDD1_3231 383cc86c703800bc3a56b891925c6758 359 SMART SM01005 233 357 1.2E-59 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_0501 64eda1f35cd70f37f3402e3ae3d4cd65 128 Pfam PF01042 Endoribonuclease L-PSP 7 126 4.7E-44 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 XDD1_0501 64eda1f35cd70f37f3402e3ae3d4cd65 128 Gene3D G3DSA:3.30.1330.40 1 128 2.6E-47 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XDD1_0501 64eda1f35cd70f37f3402e3ae3d4cd65 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 15-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 XDD1_0501 64eda1f35cd70f37f3402e3ae3d4cd65 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 3.0E-52 T 15-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 XDD1_0501 64eda1f35cd70f37f3402e3ae3d4cd65 128 SUPERFAMILY SSF55298 5 127 1.34E-42 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XDD1_2720 b309e70e51fc033565bf53dd118d9a45 387 Gene3D G3DSA:2.40.110.10 121 230 1.9E-23 T 15-10-2018 XDD1_2720 b309e70e51fc033565bf53dd118d9a45 387 Gene3D G3DSA:1.20.140.10 231 376 6.7E-34 T 15-10-2018 XDD1_2720 b309e70e51fc033565bf53dd118d9a45 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 374 6.3E-31 T 15-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 XDD1_2720 b309e70e51fc033565bf53dd118d9a45 387 SUPERFAMILY SSF56645 2 223 5.37E-54 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 XDD1_2720 b309e70e51fc033565bf53dd118d9a45 387 Gene3D G3DSA:1.10.540.10 1 119 1.4E-27 T 15-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 XDD1_2720 b309e70e51fc033565bf53dd118d9a45 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 212 4.6E-14 T 15-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 XDD1_2720 b309e70e51fc033565bf53dd118d9a45 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 118 2.2E-23 T 15-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 XDD1_2720 b309e70e51fc033565bf53dd118d9a45 387 SUPERFAMILY SSF47203 232 374 3.22E-33 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 XDD1_2189 48b8cae7d1dad28ab905591d777be292 669 Pfam PF13237 4Fe-4S dicluster domain 374 427 5.9E-10 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XDD1_2189 48b8cae7d1dad28ab905591d777be292 669 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 6.6E-30 T 15-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain XDD1_2189 48b8cae7d1dad28ab905591d777be292 669 SUPERFAMILY SSF142019 94 303 1.96E-59 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2189 48b8cae7d1dad28ab905591d777be292 669 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 445 3.3E-180 T 15-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 XDD1_2189 48b8cae7d1dad28ab905591d777be292 669 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 1.6E-47 T 15-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2189 48b8cae7d1dad28ab905591d777be292 669 Gene3D G3DSA:3.30.70.20 370 446 6.3E-12 T 15-10-2018 XDD1_2189 48b8cae7d1dad28ab905591d777be292 669 SUPERFAMILY SSF46548 336 444 1.96E-21 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XDD1_2189 48b8cae7d1dad28ab905591d777be292 669 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 669 243.876 T 15-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 XDD1_2189 48b8cae7d1dad28ab905591d777be292 669 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XDD1_2189 48b8cae7d1dad28ab905591d777be292 669 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XDD1_2189 48b8cae7d1dad28ab905591d777be292 669 Gene3D G3DSA:3.40.50.11540 144 288 1.3E-11 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2189 48b8cae7d1dad28ab905591d777be292 669 Pfam PF10531 SLBB domain 296 344 5.0E-12 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_0395 1953db112a526590e09a9c93a58c77ff 446 Pfam PF07690 Major Facilitator Superfamily 17 403 1.8E-52 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0395 1953db112a526590e09a9c93a58c77ff 446 SUPERFAMILY SSF103473 9 445 2.88E-70 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0395 1953db112a526590e09a9c93a58c77ff 446 PRINTS PR01036 Tetracycline resistance protein TetB signature 16 40 6.4E-11 T 15-10-2018 XDD1_0395 1953db112a526590e09a9c93a58c77ff 446 PRINTS PR01036 Tetracycline resistance protein TetB signature 198 216 6.4E-11 T 15-10-2018 XDD1_0395 1953db112a526590e09a9c93a58c77ff 446 PRINTS PR01036 Tetracycline resistance protein TetB signature 107 127 6.4E-11 T 15-10-2018 XDD1_0395 1953db112a526590e09a9c93a58c77ff 446 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 6.4E-11 T 15-10-2018 XDD1_0395 1953db112a526590e09a9c93a58c77ff 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 83 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 XDD1_0395 1953db112a526590e09a9c93a58c77ff 446 Gene3D G3DSA:1.20.1720.10 14 243 1.6E-47 T 15-10-2018 XDD1_0395 1953db112a526590e09a9c93a58c77ff 446 Gene3D G3DSA:1.20.1250.20 252 446 6.0E-19 T 15-10-2018 XDD1_2004 7b39855584f9880b7f171bf250f5af60 360 SMART SM00937 63 178 1.3E-71 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 XDD1_2004 7b39855584f9880b7f171bf250f5af60 360 Gene3D G3DSA:1.20.58.410 4 101 1.8E-5 T 15-10-2018 XDD1_2004 7b39855584f9880b7f171bf250f5af60 360 Gene3D G3DSA:3.30.70.1660 111 342 3.7E-96 T 15-10-2018 XDD1_2004 7b39855584f9880b7f171bf250f5af60 360 SUPERFAMILY SSF75620 12 353 3.53E-137 T 15-10-2018 XDD1_2004 7b39855584f9880b7f171bf250f5af60 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.151 T 15-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 XDD1_2004 7b39855584f9880b7f171bf250f5af60 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 XDD1_2004 7b39855584f9880b7f171bf250f5af60 360 Pfam PF03462 PCRF domain 12 203 5.2E-76 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 XDD1_2004 7b39855584f9880b7f171bf250f5af60 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 1.5E-174 T 15-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 XDD1_2004 7b39855584f9880b7f171bf250f5af60 360 Gene3D G3DSA:3.30.160.20 210 297 3.7E-96 T 15-10-2018 XDD1_2004 7b39855584f9880b7f171bf250f5af60 360 Pfam PF00472 RF-1 domain 216 321 1.4E-41 T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 XDD1_3264 9220469a03b54206bf153ffb06d8544a 94 SMART SM00530 34 88 6.2E-5 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_3264 9220469a03b54206bf153ffb06d8544a 94 Gene3D G3DSA:1.10.260.40 3 91 1.3E-15 T 15-10-2018 XDD1_3264 9220469a03b54206bf153ffb06d8544a 94 SUPERFAMILY SSF47413 35 82 3.33E-10 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_3264 9220469a03b54206bf153ffb06d8544a 94 Pfam PF01381 Helix-turn-helix 35 78 1.7E-7 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_1344 a970190a3064e7ddd9a90d7ebca11574 388 Pfam PF08442 ATP-grasp domain 2 203 1.5E-81 T 15-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XDD1_1344 a970190a3064e7ddd9a90d7ebca11574 388 SUPERFAMILY SSF56059 1 238 4.6E-80 T 15-10-2018 XDD1_1344 a970190a3064e7ddd9a90d7ebca11574 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.987 T 15-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XDD1_1344 a970190a3064e7ddd9a90d7ebca11574 388 PIRSF PIRSF001554 1 388 2.2E-153 T 15-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XDD1_1344 a970190a3064e7ddd9a90d7ebca11574 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.3E-177 T 15-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XDD1_1344 a970190a3064e7ddd9a90d7ebca11574 388 SUPERFAMILY SSF52210 240 384 1.28E-52 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XDD1_1344 a970190a3064e7ddd9a90d7ebca11574 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 15-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XDD1_1344 a970190a3064e7ddd9a90d7ebca11574 388 Pfam PF00549 CoA-ligase 262 382 3.6E-24 T 15-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XDD1_1344 a970190a3064e7ddd9a90d7ebca11574 388 Gene3D G3DSA:3.40.50.261 240 387 1.1E-55 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XDD1_1344 a970190a3064e7ddd9a90d7ebca11574 388 Gene3D G3DSA:3.30.1490.20 21 104 9.3E-95 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XDD1_1344 a970190a3064e7ddd9a90d7ebca11574 388 Gene3D G3DSA:3.30.470.20 1 234 9.3E-95 T 15-10-2018 XDD1_1161 b8fc8f6e898c57da77af80af939f653f 160 Pfam PF01478 Type IV leader peptidase family 14 120 6.2E-23 T 15-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 XDD1_1161 b8fc8f6e898c57da77af80af939f653f 160 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 103 118 1.6E-19 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial XDD1_1161 b8fc8f6e898c57da77af80af939f653f 160 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 80 90 1.6E-19 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial XDD1_1161 b8fc8f6e898c57da77af80af939f653f 160 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 91 102 1.6E-19 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial XDD1_1161 b8fc8f6e898c57da77af80af939f653f 160 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 23 40 1.6E-19 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 SUPERFAMILY SSF88946 115 448 5.18E-103 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 Gene3D G3DSA:1.10.601.10 113 450 2.0E-149 T 15-10-2018 XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 SUPERFAMILY SSF88659 511 613 1.8E-25 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 Gene3D G3DSA:1.10.220.120 1 64 4.3E-31 T 15-10-2018 XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 Gene3D G3DSA:1.10.10.10 454 530 1.4E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 405 418 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 614 46.34 T 15-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 Pfam PF04545 Sigma-70, region 4 549 602 1.0E-18 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 Pfam PF04546 Sigma-70, non-essential region 139 350 5.9E-73 T 15-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 377 602 3.7E-38 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 PRINTS PR00046 Major sigma-70 factor signature 574 589 6.4E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 PRINTS PR00046 Major sigma-70 factor signature 429 437 6.4E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 PRINTS PR00046 Major sigma-70 factor signature 589 600 6.4E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 PRINTS PR00046 Major sigma-70 factor signature 405 418 6.4E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 PRINTS PR00046 Major sigma-70 factor signature 553 565 6.4E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.8E-12 T 15-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 SUPERFAMILY SSF88659 454 527 2.24E-20 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 Pfam PF04539 Sigma-70 region 3 460 535 7.0E-29 T 15-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 574 600 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 Pfam PF04542 Sigma-70 region 2 381 450 1.7E-21 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 2.2E-30 T 15-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 377 613 2.0E-120 T 15-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 XDD1_3417 e6b3df521d85fdd5c947b464e3bd26e4 615 Gene3D G3DSA:1.10.10.10 531 615 1.9E-37 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0417 fd6ea8abc5f96adee310fef4f7c43831 460 Gene3D G3DSA:2.60.40.3500 44 165 1.0E-11 T 15-10-2018 XDD1_0417 fd6ea8abc5f96adee310fef4f7c43831 460 SMART SM00646 289 447 2.4E-69 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 XDD1_0417 fd6ea8abc5f96adee310fef4f7c43831 460 Pfam PF11741 AMIN domain 66 145 4.2E-6 T 15-10-2018 IPR021731 AMIN domain XDD1_0417 fd6ea8abc5f96adee310fef4f7c43831 460 SUPERFAMILY SSF53187 227 451 1.44E-51 T 15-10-2018 XDD1_0417 fd6ea8abc5f96adee310fef4f7c43831 460 Gene3D G3DSA:3.40.630.40 214 458 4.8E-69 T 15-10-2018 XDD1_0417 fd6ea8abc5f96adee310fef4f7c43831 460 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 229 446 1.2E-46 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 XDD1_2633 c97da0f86a3fc7ee606fbd3c31be9df8 360 SUPERFAMILY SSF103263 4 351 3.01E-146 T 15-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XDD1_2633 c97da0f86a3fc7ee606fbd3c31be9df8 360 Gene3D G3DSA:3.60.150.10 1 360 1.6E-155 T 15-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XDD1_2633 c97da0f86a3fc7ee606fbd3c31be9df8 360 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 15-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XDD1_2633 c97da0f86a3fc7ee606fbd3c31be9df8 360 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 15-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XDD1_2633 c97da0f86a3fc7ee606fbd3c31be9df8 360 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 4.5E-137 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XDD1_2633 c97da0f86a3fc7ee606fbd3c31be9df8 360 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.031 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XDD1_2633 c97da0f86a3fc7ee606fbd3c31be9df8 360 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 15-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XDD1_2633 c97da0f86a3fc7ee606fbd3c31be9df8 360 PIRSF PIRSF001456 3 355 4.2E-138 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XDD1_2633 c97da0f86a3fc7ee606fbd3c31be9df8 360 Pfam PF01264 Chorismate synthase 10 345 4.2E-140 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XDD1_2359 a40b26abab2199d2a3e0fbd65074cfcf 675 Pfam PF05954 Phage late control gene D protein (GPD) 36 338 9.9E-69 T 15-10-2018 XDD1_2359 a40b26abab2199d2a3e0fbd65074cfcf 675 SUPERFAMILY SSF69349 451 618 1.26E-37 T 15-10-2018 XDD1_2359 a40b26abab2199d2a3e0fbd65074cfcf 675 Gene3D G3DSA:2.30.110.50 31 338 1.2E-66 T 15-10-2018 XDD1_2359 a40b26abab2199d2a3e0fbd65074cfcf 675 Gene3D G3DSA:3.30.1920.30 231 296 1.2E-66 T 15-10-2018 XDD1_2359 a40b26abab2199d2a3e0fbd65074cfcf 675 SUPERFAMILY SSF69279 195 374 6.12E-32 T 15-10-2018 XDD1_2359 a40b26abab2199d2a3e0fbd65074cfcf 675 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 29 512 7.3E-108 T 15-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein XDD1_2359 a40b26abab2199d2a3e0fbd65074cfcf 675 Gene3D G3DSA:3.55.50.10 113 199 1.2E-66 T 15-10-2018 XDD1_2359 a40b26abab2199d2a3e0fbd65074cfcf 675 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 16 529 6.5E-166 T 15-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset XDD1_2359 a40b26abab2199d2a3e0fbd65074cfcf 675 SUPERFAMILY SSF69279 16 195 3.74E-44 T 15-10-2018 XDD1_2359 a40b26abab2199d2a3e0fbd65074cfcf 675 Gene3D G3DSA:2.40.50.230 367 465 6.4E-39 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XDD1_2359 a40b26abab2199d2a3e0fbd65074cfcf 675 SUPERFAMILY SSF69255 373 461 2.88E-29 T 15-10-2018 XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 SUPERFAMILY SSF52374 14 655 4.83E-139 T 15-10-2018 XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 3.5E-232 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 Hamap MF_02004 Valine--tRNA ligase [valS]. 15 963 16.28 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 SUPERFAMILY SSF50677 205 379 4.32E-59 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 Gene3D G3DSA:3.40.50.620 16 210 7.9E-65 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 SUPERFAMILY SSF46589 898 962 7.85E-16 T 15-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 Gene3D G3DSA:1.10.730.10 590 831 5.0E-74 T 15-10-2018 XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 Gene3D G3DSA:1.10.287.380 891 963 3.0E-19 T 15-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 901 958 7.4E-17 T 15-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 Pfam PF08264 Anticodon-binding domain of tRNA 688 839 1.1E-45 T 15-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 PRINTS PR00986 Valyl-tRNA synthetase signature 250 267 6.8E-36 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 PRINTS PR00986 Valyl-tRNA synthetase signature 483 504 6.8E-36 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 PRINTS PR00986 Valyl-tRNA synthetase signature 383 396 6.8E-36 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 PRINTS PR00986 Valyl-tRNA synthetase signature 49 60 6.8E-36 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 PRINTS PR00986 Valyl-tRNA synthetase signature 514 532 6.8E-36 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 Gene3D G3DSA:3.40.50.620 372 561 6.4E-42 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 Gene3D G3DSA:3.90.740.10 211 371 1.3E-49 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 56 67 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 TIGRFAM TIGR00422 valS: valine--tRNA ligase 16 945 0.0 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XDD1_0667 c9c2721ae4dca3688fbf2c194bb305fc 965 SUPERFAMILY SSF47323 656 913 1.31E-72 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_3327 25d205ee34c10a6abd75f10170be279a 103 PRINTS PR01274 Metalloprotease inhibitor signature 3 19 1.3E-7 T 15-10-2018 IPR022815 Protease inhibitor I38 XDD1_3327 25d205ee34c10a6abd75f10170be279a 103 PRINTS PR01274 Metalloprotease inhibitor signature 64 77 1.3E-7 T 15-10-2018 IPR022815 Protease inhibitor I38 XDD1_3327 25d205ee34c10a6abd75f10170be279a 103 Gene3D G3DSA:2.40.128.10 3 102 4.7E-29 T 15-10-2018 XDD1_3327 25d205ee34c10a6abd75f10170be279a 103 SUPERFAMILY SSF50882 3 99 1.46E-25 T 15-10-2018 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 XDD1_3327 25d205ee34c10a6abd75f10170be279a 103 ProDom PD015804 INHIBITOR PROTEASE METALLOPROTEASE PROTEINASE PRECURSOR SIGNAL PERIPLASMIC METALLOENZYME ALKALINE PRTA-SPECIFIC 12 98 7.0E-36 T 15-10-2018 IPR003086 Metalloprotease inhibitor I38 GO:0004866|GO:0030288 XDD1_3327 25d205ee34c10a6abd75f10170be279a 103 Pfam PF02974 Protease inhibitor Inh 10 99 3.0E-20 T 15-10-2018 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 XDD1_2163 37dbd5ffcb36778d051972fd5840d817 106 SUPERFAMILY SSF52833 2 105 1.47E-35 T 15-10-2018 IPR036249 Thioredoxin-like superfamily XDD1_2163 37dbd5ffcb36778d051972fd5840d817 106 PRINTS PR00421 Thioredoxin family signature 30 39 1.2E-7 T 15-10-2018 XDD1_2163 37dbd5ffcb36778d051972fd5840d817 106 PRINTS PR00421 Thioredoxin family signature 70 81 1.2E-7 T 15-10-2018 XDD1_2163 37dbd5ffcb36778d051972fd5840d817 106 PRINTS PR00421 Thioredoxin family signature 22 30 1.2E-7 T 15-10-2018 XDD1_2163 37dbd5ffcb36778d051972fd5840d817 106 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 105 1.9E-33 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 XDD1_2163 37dbd5ffcb36778d051972fd5840d817 106 Gene3D G3DSA:3.40.30.10 1 106 9.0E-33 T 15-10-2018 XDD1_2163 37dbd5ffcb36778d051972fd5840d817 106 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XDD1_2163 37dbd5ffcb36778d051972fd5840d817 106 Pfam PF00085 Thioredoxin 5 103 1.0E-28 T 15-10-2018 IPR013766 Thioredoxin domain GO:0045454 XDD1_2163 37dbd5ffcb36778d051972fd5840d817 106 PIRSF PIRSF000077 1 106 6.0E-34 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 XDD1_2878 1f559aa07780872fee551cbd2438d5dd 323 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 306 7.2E-73 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XDD1_2878 1f559aa07780872fee551cbd2438d5dd 323 Gene3D G3DSA:3.40.50.1100 53 149 1.6E-118 T 15-10-2018 XDD1_2878 1f559aa07780872fee551cbd2438d5dd 323 SUPERFAMILY SSF53686 6 315 2.75E-94 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XDD1_2878 1f559aa07780872fee551cbd2438d5dd 323 Gene3D G3DSA:3.40.50.1100 16 310 1.6E-118 T 15-10-2018 XDD1_1052 eec1cfa00c0aa0a3a2b5e862b32883f9 284 SUPERFAMILY SSF53850 94 282 4.34E-22 T 15-10-2018 XDD1_1052 eec1cfa00c0aa0a3a2b5e862b32883f9 284 Gene3D G3DSA:1.10.10.10 4 89 1.2E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1052 eec1cfa00c0aa0a3a2b5e862b32883f9 284 SUPERFAMILY SSF46785 3 84 1.52E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1052 eec1cfa00c0aa0a3a2b5e862b32883f9 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 5.4E-13 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_1052 eec1cfa00c0aa0a3a2b5e862b32883f9 284 Pfam PF03466 LysR substrate binding domain 94 278 3.9E-19 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_1052 eec1cfa00c0aa0a3a2b5e862b32883f9 284 Gene3D G3DSA:3.40.190.290 94 278 2.1E-22 T 15-10-2018 XDD1_0133 a00f89934843379efb31381b3a767cf5 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 65 1.2E-16 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XDD1_0133 a00f89934843379efb31381b3a767cf5 162 SUPERFAMILY SSF52374 4 157 6.44E-42 T 15-10-2018 XDD1_0133 a00f89934843379efb31381b3a767cf5 162 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 160 34.368 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XDD1_0133 a00f89934843379efb31381b3a767cf5 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 2.8E-46 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XDD1_0133 a00f89934843379efb31381b3a767cf5 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 2.8E-46 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XDD1_0133 a00f89934843379efb31381b3a767cf5 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 2.8E-46 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XDD1_0133 a00f89934843379efb31381b3a767cf5 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 2.8E-46 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XDD1_0133 a00f89934843379efb31381b3a767cf5 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 2.8E-46 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XDD1_0133 a00f89934843379efb31381b3a767cf5 162 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 6 158 6.0E-57 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XDD1_0133 a00f89934843379efb31381b3a767cf5 162 Pfam PF01467 Cytidylyltransferase-like 7 134 1.7E-22 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XDD1_0133 a00f89934843379efb31381b3a767cf5 162 Gene3D G3DSA:3.40.50.620 1 162 6.8E-55 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_0133 a00f89934843379efb31381b3a767cf5 162 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 13 78 8.0E-6 T 15-10-2018 XDD1_1144 26d409fff2f5cce5c9c78ace68748174 305 Gene3D G3DSA:1.10.10.10 6 91 1.8E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1144 26d409fff2f5cce5c9c78ace68748174 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 4.7E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_1144 26d409fff2f5cce5c9c78ace68748174 305 Pfam PF03466 LysR substrate binding domain 91 295 1.5E-31 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_1144 26d409fff2f5cce5c9c78ace68748174 305 SUPERFAMILY SSF53850 94 298 2.17E-32 T 15-10-2018 XDD1_1144 26d409fff2f5cce5c9c78ace68748174 305 SUPERFAMILY SSF46785 6 90 1.32E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1144 26d409fff2f5cce5c9c78ace68748174 305 Gene3D G3DSA:3.40.190.10 166 266 3.7E-44 T 15-10-2018 XDD1_1144 26d409fff2f5cce5c9c78ace68748174 305 Gene3D G3DSA:3.40.190.10 95 288 3.7E-44 T 15-10-2018 XDD1_1144 26d409fff2f5cce5c9c78ace68748174 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.7E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_1144 26d409fff2f5cce5c9c78ace68748174 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.7E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_1144 26d409fff2f5cce5c9c78ace68748174 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.7E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0309 a40f1e455386da32f9090192e6280231 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 2.1E-34 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 XDD1_0309 a40f1e455386da32f9090192e6280231 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 2.1E-34 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 XDD1_0309 a40f1e455386da32f9090192e6280231 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.1E-34 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 XDD1_0309 a40f1e455386da32f9090192e6280231 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.1E-34 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 XDD1_0309 a40f1e455386da32f9090192e6280231 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.1E-34 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 XDD1_0309 a40f1e455386da32f9090192e6280231 458 SUPERFAMILY SSF116726 148 226 1.83E-9 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 XDD1_0309 a40f1e455386da32f9090192e6280231 458 Pfam PF02080 TrkA-C domain 156 225 5.7E-10 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 XDD1_0309 a40f1e455386da32f9090192e6280231 458 Pfam PF02080 TrkA-C domain 391 451 6.7E-11 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 XDD1_0309 a40f1e455386da32f9090192e6280231 458 SUPERFAMILY SSF51735 232 376 5.05E-33 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0309 a40f1e455386da32f9090192e6280231 458 Gene3D G3DSA:3.40.50.720 233 366 7.8E-36 T 15-10-2018 XDD1_0309 a40f1e455386da32f9090192e6280231 458 Gene3D G3DSA:3.30.70.1450 140 232 8.9E-22 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 XDD1_0309 a40f1e455386da32f9090192e6280231 458 Gene3D G3DSA:3.30.70.1450 367 458 1.5E-28 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 XDD1_0309 a40f1e455386da32f9090192e6280231 458 Pfam PF02254 TrkA-N domain 3 125 7.0E-31 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 XDD1_0309 a40f1e455386da32f9090192e6280231 458 Pfam PF02254 TrkA-N domain 235 350 1.4E-24 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 XDD1_0309 a40f1e455386da32f9090192e6280231 458 SUPERFAMILY SSF51735 1 152 1.16E-37 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0309 a40f1e455386da32f9090192e6280231 458 SUPERFAMILY SSF116726 391 451 4.45E-8 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 XDD1_0309 a40f1e455386da32f9090192e6280231 458 Gene3D G3DSA:3.40.50.720 2 139 2.5E-51 T 15-10-2018 XDD1_3026 3912b17df7f6708384366812d7729cfc 314 Gene3D G3DSA:1.10.150.170 113 215 2.6E-107 T 15-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 XDD1_3026 3912b17df7f6708384366812d7729cfc 314 SUPERFAMILY SSF53335 8 311 3.63E-43 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_3026 3912b17df7f6708384366812d7729cfc 314 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 8 312 38.027 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 XDD1_3026 3912b17df7f6708384366812d7729cfc 314 Pfam PF01795 MraW methylase family 6 311 3.1E-116 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 XDD1_3026 3912b17df7f6708384366812d7729cfc 314 PIRSF PIRSF004486 2 313 1.1E-99 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 XDD1_3026 3912b17df7f6708384366812d7729cfc 314 Gene3D G3DSA:3.40.50.150 11 311 2.6E-107 T 15-10-2018 XDD1_3026 3912b17df7f6708384366812d7729cfc 314 SUPERFAMILY SSF81799 115 214 6.02E-35 T 15-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 XDD1_3026 3912b17df7f6708384366812d7729cfc 314 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 5 311 6.6E-124 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 XDD1_3308 8a4f6d02e2efac131efb3a96479bbc81 888 SUPERFAMILY SSF81301 34 183 5.79E-22 T 15-10-2018 XDD1_3308 8a4f6d02e2efac131efb3a96479bbc81 888 Gene3D G3DSA:1.10.3210.10 451 599 4.3E-8 T 15-10-2018 XDD1_3308 8a4f6d02e2efac131efb3a96479bbc81 888 SMART SM00471 458 605 1.1E-11 T 15-10-2018 IPR003607 HD/PDEase domain XDD1_3308 8a4f6d02e2efac131efb3a96479bbc81 888 SUPERFAMILY SSF81891 362 641 4.32E-13 T 15-10-2018 XDD1_3308 8a4f6d02e2efac131efb3a96479bbc81 888 SUPERFAMILY SSF81593 207 322 1.49E-11 T 15-10-2018 XDD1_3308 8a4f6d02e2efac131efb3a96479bbc81 888 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 888 326.733 T 15-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 XDD1_3308 8a4f6d02e2efac131efb3a96479bbc81 888 SUPERFAMILY SSF55021 812 875 1.64E-9 T 15-10-2018 XDD1_3308 8a4f6d02e2efac131efb3a96479bbc81 888 Gene3D G3DSA:3.30.70.260 808 885 2.8E-5 T 15-10-2018 XDD1_3308 8a4f6d02e2efac131efb3a96479bbc81 888 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 42 882 2.4E-298 T 15-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 XDD1_3308 8a4f6d02e2efac131efb3a96479bbc81 888 PIRSF PIRSF006288 19 888 0.0 T 15-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 XDD1_3308 8a4f6d02e2efac131efb3a96479bbc81 888 SUPERFAMILY SSF55021 703 777 1.98E-9 T 15-10-2018 XDD1_3308 8a4f6d02e2efac131efb3a96479bbc81 888 Pfam PF01842 ACT domain 816 862 6.3E-8 T 15-10-2018 IPR002912 ACT domain XDD1_3308 8a4f6d02e2efac131efb3a96479bbc81 888 Pfam PF01966 HD domain 462 595 5.4E-14 T 15-10-2018 IPR006674 HD domain XDD1_3308 8a4f6d02e2efac131efb3a96479bbc81 888 Pfam PF08335 GlnD PII-uridylyltransferase 186 325 1.7E-38 T 15-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 XDD1_3308 8a4f6d02e2efac131efb3a96479bbc81 888 SUPERFAMILY SSF109604 438 553 1.84E-13 T 15-10-2018 XDD1_3308 8a4f6d02e2efac131efb3a96479bbc81 888 Pfam PF01909 Nucleotidyltransferase domain 67 125 1.2E-5 T 15-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 XDD1_0988 6b9dbace1740c6edaad360f53961adef 339 Gene3D G3DSA:3.40.50.720 4 328 6.5E-128 T 15-10-2018 XDD1_0988 6b9dbace1740c6edaad360f53961adef 339 PIRSF PIRSF000149 1 337 8.5E-130 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0988 6b9dbace1740c6edaad360f53961adef 339 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 2.7E-53 T 15-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0988 6b9dbace1740c6edaad360f53961adef 339 Gene3D G3DSA:3.30.360.10 154 318 6.5E-128 T 15-10-2018 XDD1_0988 6b9dbace1740c6edaad360f53961adef 339 SUPERFAMILY SSF55347 155 317 2.62E-56 T 15-10-2018 XDD1_0988 6b9dbace1740c6edaad360f53961adef 339 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 64.516 T 15-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 XDD1_0988 6b9dbace1740c6edaad360f53961adef 339 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 1.3E-179 T 15-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 XDD1_0988 6b9dbace1740c6edaad360f53961adef 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 9.3E-30 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0988 6b9dbace1740c6edaad360f53961adef 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 9.3E-30 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0988 6b9dbace1740c6edaad360f53961adef 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 9.3E-30 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0988 6b9dbace1740c6edaad360f53961adef 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 9.3E-30 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0988 6b9dbace1740c6edaad360f53961adef 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 9.3E-30 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0988 6b9dbace1740c6edaad360f53961adef 339 SMART SM00846 3 155 1.2E-75 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0988 6b9dbace1740c6edaad360f53961adef 339 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 1.5E-33 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0988 6b9dbace1740c6edaad360f53961adef 339 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 15-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0988 6b9dbace1740c6edaad360f53961adef 339 SUPERFAMILY SSF51735 1 176 4.11E-52 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_3189 25a7f9eb0e82c54f0c765c35080a4d8e 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 15-10-2018 IPR020610 Thiolase, active site GO:0016747 XDD1_3189 25a7f9eb0e82c54f0c765c35080a4d8e 387 Gene3D G3DSA:3.40.47.10 4 267 1.4E-153 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_3189 25a7f9eb0e82c54f0c765c35080a4d8e 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 3.4E-215 T 15-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 XDD1_3189 25a7f9eb0e82c54f0c765c35080a4d8e 387 PIRSF PIRSF000429 1 387 8.4E-134 T 15-10-2018 IPR002155 Thiolase GO:0016747 XDD1_3189 25a7f9eb0e82c54f0c765c35080a4d8e 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 1.4E-143 T 15-10-2018 IPR002155 Thiolase GO:0016747 XDD1_3189 25a7f9eb0e82c54f0c765c35080a4d8e 387 SUPERFAMILY SSF53901 262 386 3.35E-43 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_3189 25a7f9eb0e82c54f0c765c35080a4d8e 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 15-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 XDD1_3189 25a7f9eb0e82c54f0c765c35080a4d8e 387 SUPERFAMILY SSF53901 1 259 6.96E-79 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_3189 25a7f9eb0e82c54f0c765c35080a4d8e 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 15-10-2018 IPR020613 Thiolase, conserved site GO:0016747 XDD1_3189 25a7f9eb0e82c54f0c765c35080a4d8e 387 Pfam PF02803 Thiolase, C-terminal domain 261 386 1.6E-48 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 XDD1_3189 25a7f9eb0e82c54f0c765c35080a4d8e 387 Gene3D G3DSA:3.40.47.10 134 381 1.4E-153 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_3189 25a7f9eb0e82c54f0c765c35080a4d8e 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 7.0E-86 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 XDD1_2196 19a69bd2e497255a728e78475a142905 306 SUPERFAMILY SSF56601 46 304 1.38E-73 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XDD1_2196 19a69bd2e497255a728e78475a142905 306 Pfam PF13354 Beta-lactamase enzyme family 70 272 6.1E-38 T 15-10-2018 XDD1_2196 19a69bd2e497255a728e78475a142905 306 PRINTS PR00118 Beta-lactamase class A signature 237 252 7.8E-68 T 15-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 XDD1_2196 19a69bd2e497255a728e78475a142905 306 PRINTS PR00118 Beta-lactamase class A signature 49 73 7.8E-68 T 15-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 XDD1_2196 19a69bd2e497255a728e78475a142905 306 PRINTS PR00118 Beta-lactamase class A signature 184 209 7.8E-68 T 15-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 XDD1_2196 19a69bd2e497255a728e78475a142905 306 PRINTS PR00118 Beta-lactamase class A signature 158 182 7.8E-68 T 15-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 XDD1_2196 19a69bd2e497255a728e78475a142905 306 PRINTS PR00118 Beta-lactamase class A signature 220 235 7.8E-68 T 15-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 XDD1_2196 19a69bd2e497255a728e78475a142905 306 PRINTS PR00118 Beta-lactamase class A signature 122 147 7.8E-68 T 15-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 XDD1_2196 19a69bd2e497255a728e78475a142905 306 PRINTS PR00118 Beta-lactamase class A signature 80 97 7.8E-68 T 15-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 XDD1_2196 19a69bd2e497255a728e78475a142905 306 Gene3D G3DSA:3.40.710.10 45 306 1.2E-72 T 15-10-2018 XDD1_3491 9397132a201ca039fd0442d6853a3c96 599 Gene3D G3DSA:3.40.50.2300 259 548 1.1E-67 T 15-10-2018 XDD1_3491 9397132a201ca039fd0442d6853a3c96 599 SUPERFAMILY SSF53822 176 558 2.31E-78 T 15-10-2018 IPR028082 Periplasmic binding protein-like I XDD1_3491 9397132a201ca039fd0442d6853a3c96 599 Gene3D G3DSA:1.25.40.650 60 173 2.0E-33 T 15-10-2018 XDD1_3491 9397132a201ca039fd0442d6853a3c96 599 Gene3D G3DSA:3.40.50.2300 331 549 1.1E-67 T 15-10-2018 XDD1_3491 9397132a201ca039fd0442d6853a3c96 599 Pfam PF04348 LppC putative lipoprotein 51 202 4.2E-27 T 15-10-2018 IPR007443 Penicillin-binding protein activator LpoA XDD1_3491 9397132a201ca039fd0442d6853a3c96 599 Pfam PF04348 LppC putative lipoprotein 259 555 1.2E-86 T 15-10-2018 IPR007443 Penicillin-binding protein activator LpoA XDD1_0427 88ef25f8a3c548a8e7c2c6e519325dda 139 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 127 3.4E-34 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type XDD1_0427 88ef25f8a3c548a8e7c2c6e519325dda 139 Pfam PF02082 Transcriptional regulator 2 82 3.5E-24 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type XDD1_0427 88ef25f8a3c548a8e7c2c6e519325dda 139 Gene3D G3DSA:1.10.10.10 1 135 7.9E-33 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0427 88ef25f8a3c548a8e7c2c6e519325dda 139 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 15-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site XDD1_0427 88ef25f8a3c548a8e7c2c6e519325dda 139 SUPERFAMILY SSF46785 2 129 1.72E-32 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3027 ef30a67c230efda492b8a8565dc044eb 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 151 9.8E-61 T 15-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 XDD1_3027 ef30a67c230efda492b8a8565dc044eb 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 1.8E-23 T 15-10-2018 IPR020603 MraZ domain XDD1_3027 ef30a67c230efda492b8a8565dc044eb 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 140 1.8E-20 T 15-10-2018 IPR020603 MraZ domain XDD1_3027 ef30a67c230efda492b8a8565dc044eb 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 56.231 T 15-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 XDD1_3027 ef30a67c230efda492b8a8565dc044eb 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 141 2.0E-72 T 15-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 XDD1_3027 ef30a67c230efda492b8a8565dc044eb 152 SUPERFAMILY SSF89447 1 137 2.3E-45 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily XDD1_3027 ef30a67c230efda492b8a8565dc044eb 152 Gene3D G3DSA:2.40.330.20 1 148 3.3E-43 T 15-10-2018 IPR038619 MraZ superfamily XDD1_3625 faf8747173114c47f60154c49d637b69 383 Gene3D G3DSA:1.20.1250.20 13 192 6.1E-19 T 15-10-2018 XDD1_3625 faf8747173114c47f60154c49d637b69 383 Gene3D G3DSA:1.20.1250.20 200 380 3.0E-17 T 15-10-2018 XDD1_3625 faf8747173114c47f60154c49d637b69 383 Pfam PF07690 Major Facilitator Superfamily 19 180 2.5E-11 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_3625 faf8747173114c47f60154c49d637b69 383 SUPERFAMILY SSF103473 16 380 4.97E-37 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1145 4a049fd02c0ce5cde12ed39d9ca169e6 432 Gene3D G3DSA:3.30.499.20 4 275 1.6E-95 T 15-10-2018 XDD1_1145 4a049fd02c0ce5cde12ed39d9ca169e6 432 PRINTS PR00415 Aconitase family signature 119 132 1.3E-15 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XDD1_1145 4a049fd02c0ce5cde12ed39d9ca169e6 432 PRINTS PR00415 Aconitase family signature 209 222 1.3E-15 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XDD1_1145 4a049fd02c0ce5cde12ed39d9ca169e6 432 PRINTS PR00415 Aconitase family signature 195 208 1.3E-15 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XDD1_1145 4a049fd02c0ce5cde12ed39d9ca169e6 432 PRINTS PR00415 Aconitase family signature 133 148 1.3E-15 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XDD1_1145 4a049fd02c0ce5cde12ed39d9ca169e6 432 Pfam PF00330 Aconitase family (aconitate hydratase) 74 423 8.7E-78 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XDD1_1145 4a049fd02c0ce5cde12ed39d9ca169e6 432 Gene3D G3DSA:3.30.499.10 278 432 6.8E-46 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 XDD1_1145 4a049fd02c0ce5cde12ed39d9ca169e6 432 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 429 8.2E-129 T 15-10-2018 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 XDD1_1145 4a049fd02c0ce5cde12ed39d9ca169e6 432 SUPERFAMILY SSF53732 1 431 1.07E-120 T 15-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 XDD1_0390 0861388650ba8b35f1929aa6f33fe733 143 SUPERFAMILY SSF69118 6 142 2.78E-38 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 XDD1_0390 0861388650ba8b35f1929aa6f33fe733 143 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 36 77 9.8E-15 T 15-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 XDD1_0390 0861388650ba8b35f1929aa6f33fe733 143 Pfam PF02627 Carboxymuconolactone decarboxylase family 13 95 1.9E-17 T 15-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 XDD1_0390 0861388650ba8b35f1929aa6f33fe733 143 Gene3D G3DSA:1.20.1290.10 2 143 5.2E-39 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 Gene3D G3DSA:3.30.980.10 69 222 9.0E-62 T 15-10-2018 XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 SMART SM00863 170 219 1.2E-18 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 1.0E-13 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 Gene3D G3DSA:3.40.50.800 532 642 3.5E-32 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 1.5E-242 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 Pfam PF02824 TGS domain 4 61 5.7E-12 T 15-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 SUPERFAMILY SSF55681 243 525 4.54E-96 T 15-10-2018 XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 1.4E-54 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 1.4E-54 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 1.4E-54 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 1.4E-54 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 1.4E-54 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 Gene3D G3DSA:3.10.20.30 3 62 1.4E-22 T 15-10-2018 IPR012675 Beta-grasp domain superfamily XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 529 7.8E-51 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 SUPERFAMILY SSF55186 63 241 8.24E-65 T 15-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 Pfam PF03129 Anticodon binding domain 541 629 5.6E-23 T 15-10-2018 IPR004154 Anticodon-binding XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 Gene3D G3DSA:3.30.930.10 223 531 2.2E-129 T 15-10-2018 XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 SUPERFAMILY SSF52954 529 636 2.27E-33 T 15-10-2018 XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.025 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 SUPERFAMILY SSF81271 3 61 9.48E-16 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 XDD1_1772 2d013500d5e91f690d9c6ebbe42d375b 642 Gene3D G3DSA:3.30.54.20 130 187 9.0E-62 T 15-10-2018 XDD1_3835 bbda38c16bf2091a8e167829306cbe4d 482 SUPERFAMILY SSF52172 1 191 3.42E-44 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_3835 bbda38c16bf2091a8e167829306cbe4d 482 Gene3D G3DSA:3.40.50.2300 1 129 1.2E-40 T 15-10-2018 XDD1_3835 bbda38c16bf2091a8e167829306cbe4d 482 Pfam PF00072 Response regulator receiver domain 6 120 9.8E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_3835 bbda38c16bf2091a8e167829306cbe4d 482 SMART SM00448 4 120 9.2E-36 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_3835 bbda38c16bf2091a8e167829306cbe4d 482 Gene3D G3DSA:1.10.10.60 395 482 2.6E-23 T 15-10-2018 XDD1_3835 bbda38c16bf2091a8e167829306cbe4d 482 Pfam PF00158 Sigma-54 interaction domain 146 312 7.5E-70 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 XDD1_3835 bbda38c16bf2091a8e167829306cbe4d 482 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 XDD1_3835 bbda38c16bf2091a8e167829306cbe4d 482 SUPERFAMILY SSF46689 396 482 7.62E-19 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3835 bbda38c16bf2091a8e167829306cbe4d 482 Gene3D G3DSA:1.10.8.60 317 394 1.5E-18 T 15-10-2018 XDD1_3835 bbda38c16bf2091a8e167829306cbe4d 482 SUPERFAMILY SSF52540 145 388 2.87E-73 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3835 bbda38c16bf2091a8e167829306cbe4d 482 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 463 482 1.5E-9 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XDD1_3835 bbda38c16bf2091a8e167829306cbe4d 482 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 446 463 1.5E-9 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XDD1_3835 bbda38c16bf2091a8e167829306cbe4d 482 SMART SM00382 166 309 2.0E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3835 bbda38c16bf2091a8e167829306cbe4d 482 Gene3D G3DSA:3.40.50.300 131 316 1.6E-65 T 15-10-2018 XDD1_3835 bbda38c16bf2091a8e167829306cbe4d 482 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 XDD1_3835 bbda38c16bf2091a8e167829306cbe4d 482 Pfam PF02954 Bacterial regulatory protein, Fis family 440 480 4.3E-13 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XDD1_3835 bbda38c16bf2091a8e167829306cbe4d 482 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 480 1.6E-227 T 15-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 XDD1_2696 c4a048dda15053c2d0bde0b99c2be283 214 Hamap MF_00987 L-fuculose phosphate aldolase [fucA]. 2 214 53.545 T 15-10-2018 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 XDD1_2696 c4a048dda15053c2d0bde0b99c2be283 214 Gene3D G3DSA:3.40.225.10 2 214 1.3E-75 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily XDD1_2696 c4a048dda15053c2d0bde0b99c2be283 214 SUPERFAMILY SSF53639 2 212 8.63E-64 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily XDD1_2696 c4a048dda15053c2d0bde0b99c2be283 214 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 183 3.1E-47 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal XDD1_2696 c4a048dda15053c2d0bde0b99c2be283 214 SMART SM01007 9 183 1.3E-61 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal XDD1_3534 1d4462f1ae16443bc2fb184799d8c5ac 411 SMART SM01005 279 407 3.7E-43 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3534 1d4462f1ae16443bc2fb184799d8c5ac 411 TIGRFAM TIGR00492 alr: alanine racemase 42 393 6.3E-69 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3534 1d4462f1ae16443bc2fb184799d8c5ac 411 Hamap MF_01201 Alanine racemase. 40 407 23.589 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3534 1d4462f1ae16443bc2fb184799d8c5ac 411 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 71 81 - T 15-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3534 1d4462f1ae16443bc2fb184799d8c5ac 411 Gene3D G3DSA:3.20.20.10 49 266 2.3E-131 T 15-10-2018 IPR029066 PLP-binding barrel XDD1_3534 1d4462f1ae16443bc2fb184799d8c5ac 411 Pfam PF01168 Alanine racemase, N-terminal domain 47 268 5.1E-45 T 15-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3534 1d4462f1ae16443bc2fb184799d8c5ac 411 PRINTS PR00992 Alanine racemase signature 243 270 1.8E-30 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3534 1d4462f1ae16443bc2fb184799d8c5ac 411 PRINTS PR00992 Alanine racemase signature 102 120 1.8E-30 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3534 1d4462f1ae16443bc2fb184799d8c5ac 411 PRINTS PR00992 Alanine racemase signature 312 327 1.8E-30 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3534 1d4462f1ae16443bc2fb184799d8c5ac 411 PRINTS PR00992 Alanine racemase signature 295 310 1.8E-30 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3534 1d4462f1ae16443bc2fb184799d8c5ac 411 PRINTS PR00992 Alanine racemase signature 333 350 1.8E-30 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3534 1d4462f1ae16443bc2fb184799d8c5ac 411 PRINTS PR00992 Alanine racemase signature 66 82 1.8E-30 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3534 1d4462f1ae16443bc2fb184799d8c5ac 411 Gene3D G3DSA:2.40.37.10 43 403 2.3E-131 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XDD1_3534 1d4462f1ae16443bc2fb184799d8c5ac 411 Pfam PF00842 Alanine racemase, C-terminal domain 280 405 2.7E-32 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3534 1d4462f1ae16443bc2fb184799d8c5ac 411 SUPERFAMILY SSF50621 273 408 1.05E-40 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XDD1_3534 1d4462f1ae16443bc2fb184799d8c5ac 411 SUPERFAMILY SSF51419 47 273 5.89E-42 T 15-10-2018 IPR029066 PLP-binding barrel XDD1_2921 ea717f45de14102c53aaf88a3a81dff0 112 ProDom PD073252 TRANSPOSABLE STY4640 FELS-2 RETRON ORFC C0938 ELEMENT STY3664 EC67 PHAGE-RELATED 1 110 4.0E-25 T 15-10-2018 IPR035232 Protein of unknown function DUF5347 XDD1_2921 ea717f45de14102c53aaf88a3a81dff0 112 Pfam PF17282 Family of unknown function (DUF5347) 11 110 1.1E-41 T 15-10-2018 IPR035232 Protein of unknown function DUF5347 XDD1_3631 5d3157ed0767e4b90f358931198c22c6 815 SUPERFAMILY SSF53756 18 814 7.53E-290 T 15-10-2018 XDD1_3631 5d3157ed0767e4b90f358931198c22c6 815 Gene3D G3DSA:3.40.50.2000 76 812 0.0 T 15-10-2018 XDD1_3631 5d3157ed0767e4b90f358931198c22c6 815 Gene3D G3DSA:3.40.50.2000 472 799 0.0 T 15-10-2018 XDD1_3631 5d3157ed0767e4b90f358931198c22c6 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 658 670 - T 15-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 XDD1_3631 5d3157ed0767e4b90f358931198c22c6 815 PIRSF PIRSF000460 3 815 1.2E-207 T 15-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 XDD1_3631 5d3157ed0767e4b90f358931198c22c6 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 22 813 0.0 T 15-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 XDD1_3631 5d3157ed0767e4b90f358931198c22c6 815 Pfam PF00343 Carbohydrate phosphorylase 109 813 2.3E-303 T 15-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 XDD1_0471 305e4812ff3a745c3c8c77063860981b 209 PIRSF PIRSF005461 1 209 8.0E-82 T 15-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 XDD1_0471 305e4812ff3a745c3c8c77063860981b 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 1.8E-58 T 15-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 XDD1_0471 305e4812ff3a745c3c8c77063860981b 209 Gene3D G3DSA:3.40.50.150 30 208 9.7E-62 T 15-10-2018 XDD1_0471 305e4812ff3a745c3c8c77063860981b 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 3.6E-95 T 15-10-2018 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 XDD1_0471 305e4812ff3a745c3c8c77063860981b 209 SUPERFAMILY SSF53335 31 207 1.89E-44 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_0471 305e4812ff3a745c3c8c77063860981b 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 27.964 T 15-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 XDD1_1334 ea037672adf5df49d5513bf8d3285887 397 SUPERFAMILY SSF103473 14 381 2.22E-51 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1334 ea037672adf5df49d5513bf8d3285887 397 Gene3D G3DSA:1.20.1720.10 16 382 1.9E-74 T 15-10-2018 XDD1_1334 ea037672adf5df49d5513bf8d3285887 397 Pfam PF07690 Major Facilitator Superfamily 29 353 4.4E-35 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0171 15bdb9ecc650bc0b2cb17cf2623d5eaf 458 SMART SM00387 347 457 4.0E-31 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_0171 15bdb9ecc650bc0b2cb17cf2623d5eaf 458 SUPERFAMILY SSF55874 291 455 2.36E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_0171 15bdb9ecc650bc0b2cb17cf2623d5eaf 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 455 3.5E-20 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_0171 15bdb9ecc650bc0b2cb17cf2623d5eaf 458 SMART SM00388 240 302 1.2E-15 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_0171 15bdb9ecc650bc0b2cb17cf2623d5eaf 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 410 4.1E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_0171 15bdb9ecc650bc0b2cb17cf2623d5eaf 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 4.1E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_0171 15bdb9ecc650bc0b2cb17cf2623d5eaf 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 454 4.1E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_0171 15bdb9ecc650bc0b2cb17cf2623d5eaf 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 4.1E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_0171 15bdb9ecc650bc0b2cb17cf2623d5eaf 458 SMART SM00304 186 239 5.0E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 XDD1_0171 15bdb9ecc650bc0b2cb17cf2623d5eaf 458 Gene3D G3DSA:3.30.565.10 305 456 1.5E-40 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_0171 15bdb9ecc650bc0b2cb17cf2623d5eaf 458 Gene3D G3DSA:3.30.450.210 27 149 4.2E-9 T 15-10-2018 IPR038515 CpxA, periplasmic domain superfamily XDD1_0171 15bdb9ecc650bc0b2cb17cf2623d5eaf 458 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 81 151 1.4E-8 T 15-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain XDD1_0171 15bdb9ecc650bc0b2cb17cf2623d5eaf 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 241 300 1.1E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_0171 15bdb9ecc650bc0b2cb17cf2623d5eaf 458 SUPERFAMILY SSF47384 226 301 4.32E-16 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XDD1_0171 15bdb9ecc650bc0b2cb17cf2623d5eaf 458 Gene3D G3DSA:1.10.287.130 190 304 3.6E-38 T 15-10-2018 XDD1_0171 15bdb9ecc650bc0b2cb17cf2623d5eaf 458 Pfam PF00672 HAMP domain 186 236 6.7E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 XDD1_0756 97a9039a7302c4460535e906a4453013 308 Gene3D G3DSA:3.40.190.290 97 293 1.9E-6 T 15-10-2018 XDD1_0756 97a9039a7302c4460535e906a4453013 308 SUPERFAMILY SSF46785 2 86 9.04E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_0756 97a9039a7302c4460535e906a4453013 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.0E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0756 97a9039a7302c4460535e906a4453013 308 SUPERFAMILY SSF53850 93 289 5.74E-27 T 15-10-2018 XDD1_0756 97a9039a7302c4460535e906a4453013 308 Gene3D G3DSA:1.10.10.10 5 95 4.3E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0756 97a9039a7302c4460535e906a4453013 308 Pfam PF03466 LysR substrate binding domain 98 287 4.7E-12 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_1749 bf7688aa74813286212f1b0922495679 294 Pfam PF01435 Peptidase family M48 74 289 1.4E-39 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 XDD1_1749 bf7688aa74813286212f1b0922495679 294 Hamap MF_00188 Protease HtpX [htpX]. 1 290 26.01 T 15-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 XDD1_1749 bf7688aa74813286212f1b0922495679 294 Gene3D G3DSA:3.30.2010.10 64 157 6.5E-36 T 15-10-2018 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 Pfam PF00204 DNA gyrase B 247 385 9.2E-39 T 15-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 Gene3D G3DSA:3.30.230.10 217 390 1.3E-56 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 Gene3D G3DSA:3.30.565.10 3 216 2.2E-77 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 4.2E-143 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 4.2E-143 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 4.2E-143 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 4.2E-143 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 4.2E-143 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 4.2E-143 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 4.2E-143 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 4.2E-143 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 4.2E-143 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 4.2E-143 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 4.2E-143 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 4.2E-143 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 4.2E-143 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 4.2E-143 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 SMART SM00433 35 625 3.2E-206 T 15-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 Pfam PF01751 Toprim domain 414 520 1.8E-12 T 15-10-2018 IPR006171 TOPRIM domain XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 SUPERFAMILY SSF54211 218 383 3.79E-45 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 172 2.7E-18 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 5 627 0.0 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR00418 DNA topoisomerase II family signature 498 515 6.6E-60 T 15-10-2018 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR00418 DNA topoisomerase II family signature 110 124 6.6E-60 T 15-10-2018 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR00418 DNA topoisomerase II family signature 518 530 6.6E-60 T 15-10-2018 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR00418 DNA topoisomerase II family signature 267 280 6.6E-60 T 15-10-2018 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR00418 DNA topoisomerase II family signature 32 47 6.6E-60 T 15-10-2018 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR00418 DNA topoisomerase II family signature 67 80 6.6E-60 T 15-10-2018 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR00418 DNA topoisomerase II family signature 480 496 6.6E-60 T 15-10-2018 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR00418 DNA topoisomerase II family signature 561 577 6.6E-60 T 15-10-2018 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 PRINTS PR00418 DNA topoisomerase II family signature 415 429 6.6E-60 T 15-10-2018 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 Gene3D G3DSA:3.40.50.670 391 624 3.2E-93 T 15-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 SUPERFAMILY SSF56719 389 622 8.37E-78 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 SUPERFAMILY SSF55874 6 216 9.04E-68 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 621 1.4E-24 T 15-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 15-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 629 47.169 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_3397 3184b876bc13667378d2fe26847f27cd 631 SMART SM00387 28 174 8.2E-22 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_0001 82176b9a27c9119eeb51d8c49184b784 182 Gene3D G3DSA:1.10.1750.10 89 182 1.1E-40 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 XDD1_0001 82176b9a27c9119eeb51d8c49184b784 182 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 91 159 1.9E-33 T 15-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 XDD1_0001 82176b9a27c9119eeb51d8c49184b784 182 Pfam PF00308 Bacterial dnaA protein 17 64 5.4E-11 T 15-10-2018 IPR013317 Chromosomal replication initiator protein DnaA XDD1_0001 82176b9a27c9119eeb51d8c49184b784 182 SMART SM00760 90 159 6.1E-45 T 15-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 XDD1_0001 82176b9a27c9119eeb51d8c49184b784 182 ProSitePatterns PS01008 DnaA protein signature. 140 159 - T 15-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 XDD1_0001 82176b9a27c9119eeb51d8c49184b784 182 SUPERFAMILY SSF48295 78 181 4.45E-39 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 XDD1_0001 82176b9a27c9119eeb51d8c49184b784 182 Gene3D G3DSA:1.10.8.60 15 83 6.0E-22 T 15-10-2018 XDD1_1471 0ae1ab7ddbe70a29722a24703e5014cc 678 SUPERFAMILY SSF52540 11 422 5.56E-137 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1471 0ae1ab7ddbe70a29722a24703e5014cc 678 SMART SM00490 467 553 7.2E-20 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_1471 0ae1ab7ddbe70a29722a24703e5014cc 678 Gene3D G3DSA:3.40.50.300 3 237 1.4E-77 T 15-10-2018 XDD1_1471 0ae1ab7ddbe70a29722a24703e5014cc 678 SUPERFAMILY SSF52540 44 590 7.14E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1471 0ae1ab7ddbe70a29722a24703e5014cc 678 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 12 671 0.0 T 15-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 XDD1_1471 0ae1ab7ddbe70a29722a24703e5014cc 678 Pfam PF00271 Helicase conserved C-terminal domain 449 551 3.7E-17 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_1471 0ae1ab7ddbe70a29722a24703e5014cc 678 Hamap MF_00204 UvrABC system protein B [uvrB]. 10 673 44.037 T 15-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 XDD1_1471 0ae1ab7ddbe70a29722a24703e5014cc 678 SMART SM00487 16 433 1.4E-27 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XDD1_1471 0ae1ab7ddbe70a29722a24703e5014cc 678 Gene3D G3DSA:3.40.50.300 238 421 1.6E-52 T 15-10-2018 XDD1_1471 0ae1ab7ddbe70a29722a24703e5014cc 678 Pfam PF02151 UvrB/uvrC motif 640 673 7.0E-10 T 15-10-2018 IPR001943 UVR domain GO:0005515 XDD1_1471 0ae1ab7ddbe70a29722a24703e5014cc 678 Gene3D G3DSA:4.10.860.10 625 678 7.1E-17 T 15-10-2018 XDD1_1471 0ae1ab7ddbe70a29722a24703e5014cc 678 Pfam PF04851 Type III restriction enzyme, res subunit 23 99 1.3E-8 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XDD1_1471 0ae1ab7ddbe70a29722a24703e5014cc 678 Gene3D G3DSA:3.40.50.300 422 596 8.8E-51 T 15-10-2018 XDD1_1471 0ae1ab7ddbe70a29722a24703e5014cc 678 Pfam PF12344 Ultra-violet resistance protein B 559 600 2.4E-21 T 15-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain XDD1_1471 0ae1ab7ddbe70a29722a24703e5014cc 678 SUPERFAMILY SSF46600 627 674 3.4E-12 T 15-10-2018 IPR036876 UVR domain superfamily XDD1_1705 e637f5732a7fc254244b205e6aee72fc 257 Gene3D G3DSA:3.40.50.1820 3 245 8.4E-44 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1705 e637f5732a7fc254244b205e6aee72fc 257 Pfam PF00975 Thioesterase domain 18 243 1.3E-31 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 XDD1_1705 e637f5732a7fc254244b205e6aee72fc 257 SUPERFAMILY SSF53474 12 239 1.1E-33 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_3890 bffa4eb0758d5e7b9302efa21ad8823d 260 Gene3D G3DSA:3.40.50.1820 1 256 4.1E-69 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_3890 bffa4eb0758d5e7b9302efa21ad8823d 260 Pfam PF00561 alpha/beta hydrolase fold 16 242 1.2E-19 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_3890 bffa4eb0758d5e7b9302efa21ad8823d 260 SUPERFAMILY SSF53474 3 252 4.17E-46 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_3890 bffa4eb0758d5e7b9302efa21ad8823d 260 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 46.168 T 15-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 XDD1_3890 bffa4eb0758d5e7b9302efa21ad8823d 260 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 252 5.9E-101 T 15-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 XDD1_1192 2748567640ae71fba72fed76b2dcfc6a 368 TIGRFAM TIGR01027 proB: glutamate 5-kinase 6 366 2.8E-151 T 15-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XDD1_1192 2748567640ae71fba72fed76b2dcfc6a 368 Pfam PF00696 Amino acid kinase family 7 235 1.2E-42 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XDD1_1192 2748567640ae71fba72fed76b2dcfc6a 368 Gene3D G3DSA:2.30.130.10 267 368 2.7E-28 T 15-10-2018 IPR036974 PUA domain superfamily GO:0003723 XDD1_1192 2748567640ae71fba72fed76b2dcfc6a 368 SUPERFAMILY SSF53633 7 257 7.07E-67 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XDD1_1192 2748567640ae71fba72fed76b2dcfc6a 368 Gene3D G3DSA:3.40.1160.10 3 258 6.6E-89 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XDD1_1192 2748567640ae71fba72fed76b2dcfc6a 368 PRINTS PR00474 Glutamate 5-kinase family signature 117 138 2.0E-56 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 XDD1_1192 2748567640ae71fba72fed76b2dcfc6a 368 PRINTS PR00474 Glutamate 5-kinase family signature 210 230 2.0E-56 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 XDD1_1192 2748567640ae71fba72fed76b2dcfc6a 368 PRINTS PR00474 Glutamate 5-kinase family signature 149 176 2.0E-56 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 XDD1_1192 2748567640ae71fba72fed76b2dcfc6a 368 PRINTS PR00474 Glutamate 5-kinase family signature 43 57 2.0E-56 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 XDD1_1192 2748567640ae71fba72fed76b2dcfc6a 368 PRINTS PR00474 Glutamate 5-kinase family signature 77 105 2.0E-56 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 XDD1_1192 2748567640ae71fba72fed76b2dcfc6a 368 Hamap MF_00456 Glutamate 5-kinase [proB]. 6 264 36.849 T 15-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XDD1_1192 2748567640ae71fba72fed76b2dcfc6a 368 SMART SM00359 277 360 8.0E-18 T 15-10-2018 IPR002478 PUA domain GO:0003723 XDD1_1192 2748567640ae71fba72fed76b2dcfc6a 368 ProSitePatterns PS00902 Glutamate 5-kinase signature. 208 225 - T 15-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XDD1_1192 2748567640ae71fba72fed76b2dcfc6a 368 Pfam PF01472 PUA domain 277 351 1.0E-18 T 15-10-2018 IPR002478 PUA domain GO:0003723 XDD1_1192 2748567640ae71fba72fed76b2dcfc6a 368 PIRSF PIRSF000729 1 368 4.7E-142 T 15-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 XDD1_1192 2748567640ae71fba72fed76b2dcfc6a 368 SUPERFAMILY SSF88697 277 367 4.14E-22 T 15-10-2018 IPR015947 PUA-like superfamily XDD1_0467 6ca4b976bff2f451a38419faa5f39f5a 474 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 19 464 2.3E-147 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XDD1_0467 6ca4b976bff2f451a38419faa5f39f5a 474 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 357 371 1.2E-33 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XDD1_0467 6ca4b976bff2f451a38419faa5f39f5a 474 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 421 434 1.2E-33 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XDD1_0467 6ca4b976bff2f451a38419faa5f39f5a 474 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 55 74 1.2E-33 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XDD1_0467 6ca4b976bff2f451a38419faa5f39f5a 474 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 283 305 1.2E-33 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XDD1_0467 6ca4b976bff2f451a38419faa5f39f5a 474 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 342 356 1.2E-33 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XDD1_0467 6ca4b976bff2f451a38419faa5f39f5a 474 SUPERFAMILY SSF56601 21 470 8.12E-95 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XDD1_0467 6ca4b976bff2f451a38419faa5f39f5a 474 Gene3D G3DSA:3.40.710.10 253 474 7.2E-64 T 15-10-2018 XDD1_0467 6ca4b976bff2f451a38419faa5f39f5a 474 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 44 443 2.0E-152 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XDD1_0467 6ca4b976bff2f451a38419faa5f39f5a 474 Gene3D G3DSA:3.50.80.20 79 180 2.9E-20 T 15-10-2018 XDD1_1305 d9cbd10b955202b8afc0d3f727289447 106 Gene3D G3DSA:2.30.30.110 1 106 7.3E-30 T 15-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor XDD1_1305 d9cbd10b955202b8afc0d3f727289447 106 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 18 100 8.0E-7 T 15-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 XDD1_1305 d9cbd10b955202b8afc0d3f727289447 106 Pfam PF01845 CcdB protein 3 104 1.8E-30 T 15-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 XDD1_1305 d9cbd10b955202b8afc0d3f727289447 106 SUPERFAMILY SSF50118 3 104 4.8E-23 T 15-10-2018 XDD1_1707 b391488887e5f7a6564fa2a5caa60600 200 Pfam PF06821 Serine hydrolase 17 195 2.9E-26 T 15-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 XDD1_1707 b391488887e5f7a6564fa2a5caa60600 200 SUPERFAMILY SSF53474 14 192 2.58E-34 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1707 b391488887e5f7a6564fa2a5caa60600 200 Gene3D G3DSA:3.40.50.1820 12 200 9.6E-44 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2637 523c1fa76ed4142aa46a2f91fb14587a 376 SUPERFAMILY SSF58100 97 171 9.94E-8 T 15-10-2018 XDD1_2637 523c1fa76ed4142aa46a2f91fb14587a 376 SUPERFAMILY SSF58100 168 281 3.14E-10 T 15-10-2018 XDD1_2637 523c1fa76ed4142aa46a2f91fb14587a 376 SUPERFAMILY SSF58100 251 344 1.12E-5 T 15-10-2018 XDD1_2637 523c1fa76ed4142aa46a2f91fb14587a 376 Gene3D G3DSA:1.20.5.170 130 176 2.7E-7 T 15-10-2018 XDD1_2637 523c1fa76ed4142aa46a2f91fb14587a 376 Gene3D G3DSA:1.20.5.170 177 229 5.3E-9 T 15-10-2018 XDD1_2637 523c1fa76ed4142aa46a2f91fb14587a 376 Gene3D G3DSA:1.20.5.340 259 355 3.9E-8 T 15-10-2018 XDD1_3558 26d76ef1b6e2e861a7e62546cc1e5aa4 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.7E-39 T 15-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XDD1_3558 26d76ef1b6e2e861a7e62546cc1e5aa4 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XDD1_3558 26d76ef1b6e2e861a7e62546cc1e5aa4 449 Gene3D G3DSA:3.30.470.20 86 433 2.1E-156 T 15-10-2018 XDD1_3558 26d76ef1b6e2e861a7e62546cc1e5aa4 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 1.3E-248 T 15-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 XDD1_3558 26d76ef1b6e2e861a7e62546cc1e5aa4 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XDD1_3558 26d76ef1b6e2e861a7e62546cc1e5aa4 449 Gene3D G3DSA:3.40.50.20 1 85 3.8E-34 T 15-10-2018 XDD1_3558 26d76ef1b6e2e861a7e62546cc1e5aa4 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 1.4E-83 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XDD1_3558 26d76ef1b6e2e861a7e62546cc1e5aa4 449 SUPERFAMILY SSF51246 331 444 1.41E-44 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 XDD1_3558 26d76ef1b6e2e861a7e62546cc1e5aa4 449 SMART SM00878 336 441 7.8E-67 T 15-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XDD1_3558 26d76ef1b6e2e861a7e62546cc1e5aa4 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.4E-44 T 15-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XDD1_3558 26d76ef1b6e2e861a7e62546cc1e5aa4 449 Gene3D G3DSA:3.30.1490.20 131 203 2.1E-156 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XDD1_3558 26d76ef1b6e2e861a7e62546cc1e5aa4 449 SUPERFAMILY SSF52440 1 113 2.16E-46 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XDD1_3558 26d76ef1b6e2e861a7e62546cc1e5aa4 449 SUPERFAMILY SSF56059 83 347 7.74E-68 T 15-10-2018 XDD1_2693 e727ed737cbb941d7b5e8449ded84d49 315 SUPERFAMILY SSF53756 1 314 2.2E-43 T 15-10-2018 XDD1_2693 e727ed737cbb941d7b5e8449ded84d49 315 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 235 293 3.0E-14 T 15-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 XDD1_2693 e727ed737cbb941d7b5e8449ded84d49 315 Gene3D G3DSA:3.40.50.2000 1 147 1.6E-14 T 15-10-2018 XDD1_2693 e727ed737cbb941d7b5e8449ded84d49 315 Gene3D G3DSA:3.40.50.2000 157 315 7.4E-15 T 15-10-2018 XDD1_1759 2e95a48ca7e60708fb0025899e270bb5 303 Gene3D G3DSA:3.40.50.300 16 254 5.8E-59 T 15-10-2018 XDD1_1759 2e95a48ca7e60708fb0025899e270bb5 303 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_1759 2e95a48ca7e60708fb0025899e270bb5 303 SUPERFAMILY SSF52540 9 244 2.86E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1759 2e95a48ca7e60708fb0025899e270bb5 303 Pfam PF00005 ABC transporter 35 180 5.0E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1759 2e95a48ca7e60708fb0025899e270bb5 303 SMART SM00382 42 258 1.9E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1673 733b0e650345bd5abf9544172f3117e1 134 SUPERFAMILY SSF51316 1 125 3.56E-37 T 15-10-2018 IPR011057 Mss4-like superfamily XDD1_1673 733b0e650345bd5abf9544172f3117e1 134 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 109 1.8E-15 T 15-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 XDD1_1673 733b0e650345bd5abf9544172f3117e1 134 Gene3D G3DSA:2.170.150.70 3 115 7.1E-18 T 15-10-2018 XDD1_3538 9c2273855e7a8256fe2819159f4b4b06 447 Pfam PF01523 Putative modulator of DNA gyrase 33 324 1.2E-61 T 15-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 XDD1_3538 9c2273855e7a8256fe2819159f4b4b06 447 Gene3D G3DSA:3.30.2290.10 8 232 2.5E-93 T 15-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal XDD1_3538 9c2273855e7a8256fe2819159f4b4b06 447 SUPERFAMILY SSF111283 14 446 4.71E-130 T 15-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 XDD1_2508 d2ae1bafaa0a33ec6000c91aca44dc20 174 Pfam PF02620 Uncharacterized ACR, COG1399 61 171 3.8E-16 T 15-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD XDD1_2803 ef14473df298ca90745f6b6d98517667 301 Gene3D G3DSA:1.10.1670.40 103 295 9.7E-35 T 15-10-2018 XDD1_2803 ef14473df298ca90745f6b6d98517667 301 SUPERFAMILY SSF48150 116 295 2.2E-31 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 XDD1_2803 ef14473df298ca90745f6b6d98517667 301 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 133 278 2.3E-8 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XDD1_2803 ef14473df298ca90745f6b6d98517667 301 SMART SM00478 135 297 2.4E-4 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XDD1_2803 ef14473df298ca90745f6b6d98517667 301 Gene3D G3DSA:1.10.340.30 123 244 9.7E-35 T 15-10-2018 XDD1_3374 6250e088ae63b00dd379bcfea032e455 176 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XDD1_3374 6250e088ae63b00dd379bcfea032e455 176 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.997 T 15-10-2018 IPR022927 RNA pyrophosphohydrolase RppH XDD1_3374 6250e088ae63b00dd379bcfea032e455 176 SUPERFAMILY SSF55811 6 151 6.77E-33 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XDD1_3374 6250e088ae63b00dd379bcfea032e455 176 Pfam PF00293 NUDIX domain 7 146 7.0E-29 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XDD1_3374 6250e088ae63b00dd379bcfea032e455 176 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.4E-7 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 XDD1_3374 6250e088ae63b00dd379bcfea032e455 176 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.4E-7 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 XDD1_3374 6250e088ae63b00dd379bcfea032e455 176 Gene3D G3DSA:3.90.79.10 1 160 7.5E-53 T 15-10-2018 XDD1_3298 d7763d9410f6fd5b086781e7b1d28cb8 815 Gene3D G3DSA:2.40.160.50 444 815 4.5E-141 T 15-10-2018 XDD1_3298 d7763d9410f6fd5b086781e7b1d28cb8 815 Gene3D G3DSA:3.10.20.310 36 109 2.4E-20 T 15-10-2018 XDD1_3298 d7763d9410f6fd5b086781e7b1d28cb8 815 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 20 815 25.941 T 15-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 XDD1_3298 d7763d9410f6fd5b086781e7b1d28cb8 815 Pfam PF07244 Surface antigen variable number repeat 194 281 4.5E-16 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 XDD1_3298 d7763d9410f6fd5b086781e7b1d28cb8 815 Pfam PF07244 Surface antigen variable number repeat 284 362 3.0E-11 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 XDD1_3298 d7763d9410f6fd5b086781e7b1d28cb8 815 Pfam PF07244 Surface antigen variable number repeat 110 190 1.9E-10 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 XDD1_3298 d7763d9410f6fd5b086781e7b1d28cb8 815 Pfam PF07244 Surface antigen variable number repeat 366 439 1.5E-15 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 XDD1_3298 d7763d9410f6fd5b086781e7b1d28cb8 815 Gene3D G3DSA:3.10.20.310 365 443 1.8E-26 T 15-10-2018 XDD1_3298 d7763d9410f6fd5b086781e7b1d28cb8 815 Gene3D G3DSA:3.10.20.310 110 192 6.5E-16 T 15-10-2018 XDD1_3298 d7763d9410f6fd5b086781e7b1d28cb8 815 Pfam PF01103 Surface antigen 466 813 7.6E-100 T 15-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 XDD1_3298 d7763d9410f6fd5b086781e7b1d28cb8 815 Gene3D G3DSA:3.10.20.310 193 282 2.4E-24 T 15-10-2018 XDD1_3298 d7763d9410f6fd5b086781e7b1d28cb8 815 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 42 813 1.2E-284 T 15-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 XDD1_3298 d7763d9410f6fd5b086781e7b1d28cb8 815 PIRSF PIRSF006076 8 815 1.1E-256 T 15-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 XDD1_3298 d7763d9410f6fd5b086781e7b1d28cb8 815 Gene3D G3DSA:3.10.20.310 283 364 3.5E-15 T 15-10-2018 XDD1_0374 5e45a973bc1a1f6b2f4eb7fc9cfd87ba 75 SMART SM00966 7 48 0.0012 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 XDD1_0374 5e45a973bc1a1f6b2f4eb7fc9cfd87ba 75 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 50 1.2E-9 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 XDD1_0374 5e45a973bc1a1f6b2f4eb7fc9cfd87ba 75 Gene3D G3DSA:2.10.260.10 1 75 5.5E-17 T 15-10-2018 XDD1_0374 5e45a973bc1a1f6b2f4eb7fc9cfd87ba 75 SUPERFAMILY SSF89447 3 67 3.09E-10 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Gene3D G3DSA:2.60.120.260 1424 1568 3.8E-9 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF11647 Membrane Localization Domain 2370 2439 2.6E-24 T 15-10-2018 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 SUPERFAMILY SSF49785 1427 1567 3.06E-6 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Gene3D G3DSA:3.40.50.11050 3621 3837 2.0E-83 T 15-10-2018 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Gene3D G3DSA:1.20.58.1190 2365 2456 1.8E-18 T 15-10-2018 XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF03543 Yersinia/Haemophilus virulence surface antigen 3340 3478 1.2E-9 T 15-10-2018 IPR006473 Peptidase C58, YopT-type domain GO:0004197|GO:0009405 XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 SUPERFAMILY SSF51120 4453 4661 2.77E-16 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 SUPERFAMILY SSF53474 2990 3110 3.68E-22 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Gene3D G3DSA:2.160.20.160 4330 4619 4.5E-17 T 15-10-2018 XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 SUPERFAMILY SSF158842 2354 2597 2.35E-43 T 15-10-2018 XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Gene3D G3DSA:3.40.50.1820 2958 3144 4.5E-22 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 275 291 0.11 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 1075 1087 6.0 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 255 272 3.4 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 1149 1164 0.61 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 1013 1025 30.0 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 1166 1182 0.0028 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 976 991 2.5 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 1280 1297 2.8 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 208 224 0.34 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 802 816 1.4 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 718 729 2.8 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 838 853 0.027 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 895 909 32.0 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 121 138 0.011 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 161 184 4.0E-4 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 877 893 17.0 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 1223 1240 4.0 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 996 1008 0.34 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 933 948 0.2 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 1090 1106 2.0 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 914 929 19.0 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 762 775 0.4 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 698 710 18.0 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 187 204 0.13 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 1052 1067 0.21 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 623 634 3.1 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 601 611 29.0 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 781 796 0.084 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 141 157 0.015 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 678 691 3.6 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 1109 1123 0.39 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 581 598 0.36 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 1261 1278 0.47 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 1128 1145 0.27 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 1036 1047 26.0 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF07634 RtxA repeat 857 871 0.27 T 15-10-2018 IPR011509 RtxA toxin XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF11713 Peptidase C80 family 3656 3813 5.7E-48 T 15-10-2018 IPR020974 CGT/MARTX, cysteine protease (CPD) domain XDD1_1313 e78ec3be9e4a854ddca36879d408fffb 4732 Pfam PF12146 Serine aminopeptidase, S33 2996 3138 4.4E-11 T 15-10-2018 IPR022742 Serine aminopeptidase, S33 XDD1_2103 ecb170bc896ff9781212e63483f5f0ee 324 Gene3D G3DSA:2.60.40.3310 19 190 4.1E-18 T 15-10-2018 XDD1_2103 ecb170bc896ff9781212e63483f5f0ee 324 Pfam PF00419 Fimbrial protein 186 324 4.9E-15 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 XDD1_2103 ecb170bc896ff9781212e63483f5f0ee 324 SUPERFAMILY SSF49401 190 324 7.95E-23 T 15-10-2018 IPR008966 Adhesion domain superfamily XDD1_2103 ecb170bc896ff9781212e63483f5f0ee 324 Gene3D G3DSA:2.60.40.1090 191 324 1.0E-27 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 XDD1_0862 d32c34549a11ffd4abef0a7f257f6445 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 29.744 T 15-10-2018 IPR007551 Protein of unknown function DUF520 XDD1_0862 d32c34549a11ffd4abef0a7f257f6445 163 SUPERFAMILY SSF89963 2 89 2.22E-30 T 15-10-2018 IPR036183 YajQ-like superfamily XDD1_0862 d32c34549a11ffd4abef0a7f257f6445 163 Gene3D G3DSA:3.30.70.860 98 163 2.2E-31 T 15-10-2018 IPR035571 UPF0234-like, C-terminal XDD1_0862 d32c34549a11ffd4abef0a7f257f6445 163 Gene3D G3DSA:3.30.70.990 9 97 6.2E-32 T 15-10-2018 IPR035570 UPF0234, N-terminal XDD1_0862 d32c34549a11ffd4abef0a7f257f6445 163 SUPERFAMILY SSF89963 91 163 2.49E-29 T 15-10-2018 IPR036183 YajQ-like superfamily XDD1_0862 d32c34549a11ffd4abef0a7f257f6445 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 1.1E-65 T 15-10-2018 IPR007551 Protein of unknown function DUF520 XDD1_0554 2896cb9c360a2a5e7f987c937e783a47 429 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 2 421 3.7E-207 T 15-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 XDD1_0554 2896cb9c360a2a5e7f987c937e783a47 429 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XDD1_0554 2896cb9c360a2a5e7f987c937e783a47 429 Gene3D G3DSA:3.90.1150.10 289 428 2.4E-54 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_0554 2896cb9c360a2a5e7f987c937e783a47 429 SUPERFAMILY SSF53383 1 421 1.84E-132 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_0554 2896cb9c360a2a5e7f987c937e783a47 429 PIRSF PIRSF001434 1 424 3.8E-134 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XDD1_0554 2896cb9c360a2a5e7f987c937e783a47 429 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 421 4.5E-148 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XDD1_0554 2896cb9c360a2a5e7f987c937e783a47 429 Gene3D G3DSA:3.40.640.10 1 285 1.0E-105 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_0349 9933a966b0c7a747ac3e29b647f9b5d1 420 SUPERFAMILY SSF48179 206 298 2.89E-27 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XDD1_0349 9933a966b0c7a747ac3e29b647f9b5d1 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 3.6E-19 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XDD1_0349 9933a966b0c7a747ac3e29b647f9b5d1 420 SMART SM00984 324 420 5.4E-23 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XDD1_0349 9933a966b0c7a747ac3e29b647f9b5d1 420 SUPERFAMILY SSF51735 5 198 5.4E-42 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0349 9933a966b0c7a747ac3e29b647f9b5d1 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 5.5E-117 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 XDD1_0349 9933a966b0c7a747ac3e29b647f9b5d1 420 PIRSF PIRSF000124 4 419 3.5E-72 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 XDD1_0349 9933a966b0c7a747ac3e29b647f9b5d1 420 SUPERFAMILY SSF52413 310 419 3.53E-24 T 15-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 XDD1_0349 9933a966b0c7a747ac3e29b647f9b5d1 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 77.597 T 15-10-2018 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335 XDD1_0349 9933a966b0c7a747ac3e29b647f9b5d1 420 Gene3D G3DSA:3.40.50.720 2 204 7.4E-62 T 15-10-2018 XDD1_0349 9933a966b0c7a747ac3e29b647f9b5d1 420 PIRSF PIRSF500136 1 420 4.3E-146 T 15-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 XDD1_0349 9933a966b0c7a747ac3e29b647f9b5d1 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 188 4.8E-57 T 15-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XDD1_0349 9933a966b0c7a747ac3e29b647f9b5d1 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 7.8E-26 T 15-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XDD1_0349 9933a966b0c7a747ac3e29b647f9b5d1 420 Gene3D G3DSA:3.40.50.720 205 420 5.0E-58 T 15-10-2018 XDD1_1757 b658f05a1b141bdb0be9c94849a51b32 298 Gene3D G3DSA:1.10.3470.10 44 271 1.3E-9 T 15-10-2018 IPR037294 ABC transporter, BtuC-like XDD1_1757 b658f05a1b141bdb0be9c94849a51b32 298 Pfam PF00950 ABC 3 transport family 13 268 1.2E-92 T 15-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 XDD1_1757 b658f05a1b141bdb0be9c94849a51b32 298 SUPERFAMILY SSF81345 6 265 1.44E-45 T 15-10-2018 IPR037294 ABC transporter, BtuC-like XDD1_1455 0988139ec2bf0558d13108a1e9ebb22c 347 Gene3D G3DSA:3.30.420.470 155 335 6.5E-12 T 15-10-2018 XDD1_1455 0988139ec2bf0558d13108a1e9ebb22c 347 Pfam PF13384 Homeodomain-like domain 26 73 2.6E-9 T 15-10-2018 XDD1_1455 0988139ec2bf0558d13108a1e9ebb22c 347 SUPERFAMILY SSF46689 14 140 1.22E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1455 0988139ec2bf0558d13108a1e9ebb22c 347 Pfam PF13358 DDE superfamily endonuclease 177 310 9.4E-28 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_1455 0988139ec2bf0558d13108a1e9ebb22c 347 Pfam PF13592 Winged helix-turn helix 108 156 1.3E-6 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_0120 e00c0fefbca72e5273c8299074b6c876 414 Pfam PF02441 Flavoprotein 17 191 2.7E-44 T 15-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 XDD1_0120 e00c0fefbca72e5273c8299074b6c876 414 SUPERFAMILY SSF52507 14 191 4.19E-59 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 XDD1_0120 e00c0fefbca72e5273c8299074b6c876 414 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 198 379 9.5E-74 T 15-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 XDD1_0120 e00c0fefbca72e5273c8299074b6c876 414 Gene3D G3DSA:3.40.50.10300 197 414 2.8E-86 T 15-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 XDD1_0120 e00c0fefbca72e5273c8299074b6c876 414 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 15 404 3.2E-163 T 15-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 XDD1_0120 e00c0fefbca72e5273c8299074b6c876 414 Gene3D G3DSA:3.40.50.1950 10 196 9.3E-56 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 XDD1_0120 e00c0fefbca72e5273c8299074b6c876 414 SUPERFAMILY SSF102645 195 410 6.41E-80 T 15-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 XDD1_2669 10d111402aec8b8eeb7c993c60b99250 537 ProSitePatterns PS00211 ABC transporters family signature. 456 470 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_2669 10d111402aec8b8eeb7c993c60b99250 537 SUPERFAMILY SSF52540 316 535 6.63E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2669 10d111402aec8b8eeb7c993c60b99250 537 Gene3D G3DSA:3.40.50.300 313 537 1.8E-39 T 15-10-2018 XDD1_2669 10d111402aec8b8eeb7c993c60b99250 537 Pfam PF00664 ABC transporter transmembrane region 15 253 3.1E-13 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XDD1_2669 10d111402aec8b8eeb7c993c60b99250 537 SUPERFAMILY SSF90123 7 302 1.83E-27 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_2669 10d111402aec8b8eeb7c993c60b99250 537 SMART SM00382 356 532 1.0E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_2669 10d111402aec8b8eeb7c993c60b99250 537 Gene3D G3DSA:1.20.1560.10 1 307 1.3E-23 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_2669 10d111402aec8b8eeb7c993c60b99250 537 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 4 533 1.8E-139 T 15-10-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015833|GO:0016021|GO:1904680 XDD1_2669 10d111402aec8b8eeb7c993c60b99250 537 Pfam PF00005 ABC transporter 349 483 1.9E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_2337 f3daa2723e77cf00d0bed464dd1370f6 243 Gene3D G3DSA:2.30.30.910 92 237 1.7E-22 T 15-10-2018 XDD1_2337 f3daa2723e77cf00d0bed464dd1370f6 243 Pfam PF13861 FlgD Tudor-like domain 91 240 3.4E-9 T 15-10-2018 IPR025963 FlgD Tudor-like domain XDD1_2337 f3daa2723e77cf00d0bed464dd1370f6 243 Pfam PF13860 FlgD Ig-like domain 123 199 2.5E-14 T 15-10-2018 IPR025965 FlgD Ig-like domain XDD1_2337 f3daa2723e77cf00d0bed464dd1370f6 243 Gene3D G3DSA:2.60.40.4070 106 209 1.7E-22 T 15-10-2018 XDD1_2337 f3daa2723e77cf00d0bed464dd1370f6 243 Pfam PF03963 Flagellar hook capping protein - N-terminal region 13 81 1.8E-22 T 15-10-2018 IPR005648 Flagellar hook capping protein XDD1_2001 e08a8aa8e0a17042b8c486e9789adbbc 300 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 284 32.021 T 15-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 XDD1_2001 e08a8aa8e0a17042b8c486e9789adbbc 300 Pfam PF08544 GHMP kinases C terminal 205 272 4.9E-5 T 15-10-2018 IPR013750 GHMP kinase, C-terminal domain XDD1_2001 e08a8aa8e0a17042b8c486e9789adbbc 300 SUPERFAMILY SSF54211 1 171 4.4E-46 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_2001 e08a8aa8e0a17042b8c486e9789adbbc 300 Gene3D G3DSA:3.30.70.890 174 291 2.2E-27 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily XDD1_2001 e08a8aa8e0a17042b8c486e9789adbbc 300 Pfam PF00288 GHMP kinases N terminal domain 100 157 2.6E-10 T 15-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 XDD1_2001 e08a8aa8e0a17042b8c486e9789adbbc 300 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 1 289 1.3E-106 T 15-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 XDD1_2001 e08a8aa8e0a17042b8c486e9789adbbc 300 Gene3D G3DSA:3.30.230.10 2 172 7.0E-55 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XDD1_2001 e08a8aa8e0a17042b8c486e9789adbbc 300 SUPERFAMILY SSF55060 174 290 4.51E-35 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily XDD1_2001 e08a8aa8e0a17042b8c486e9789adbbc 300 PIRSF PIRSF010376 1 292 3.4E-83 T 15-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 XDD1_1793 bf31a235c6052cf1ecacb907be908a48 355 TIGRFAM TIGR01686 FkbH: FkbH domain 17 323 2.9E-77 T 15-10-2018 IPR010037 FkbH domain XDD1_1793 bf31a235c6052cf1ecacb907be908a48 355 Gene3D G3DSA:3.40.630.30 193 338 1.3E-5 T 15-10-2018 XDD1_1793 bf31a235c6052cf1ecacb907be908a48 355 Pfam PF13419 Haloacid dehalogenase-like hydrolase 37 122 1.6E-5 T 15-10-2018 XDD1_1793 bf31a235c6052cf1ecacb907be908a48 355 SUPERFAMILY SSF56784 17 121 1.28E-13 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_1793 bf31a235c6052cf1ecacb907be908a48 355 SUPERFAMILY SSF55729 190 330 1.7E-5 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_1793 bf31a235c6052cf1ecacb907be908a48 355 Gene3D G3DSA:3.40.50.1000 17 162 1.3E-38 T 15-10-2018 IPR023214 HAD superfamily XDD1_1793 bf31a235c6052cf1ecacb907be908a48 355 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 18 125 6.2E-17 T 15-10-2018 IPR010033 HAD-superfamily phosphatase, subfamily IIIC XDD1_1188 3bce06fbc0bf26736759b07e2b5cfafc 486 Pfam PF07687 Peptidase dimerisation domain 203 291 2.4E-5 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain XDD1_1188 3bce06fbc0bf26736759b07e2b5cfafc 486 SUPERFAMILY SSF53187 10 481 3.14E-64 T 15-10-2018 XDD1_1188 3bce06fbc0bf26736759b07e2b5cfafc 486 Gene3D G3DSA:3.40.630.10 1 238 5.0E-64 T 15-10-2018 XDD1_1188 3bce06fbc0bf26736759b07e2b5cfafc 486 Gene3D G3DSA:3.40.630.10 345 486 6.7E-27 T 15-10-2018 XDD1_1188 3bce06fbc0bf26736759b07e2b5cfafc 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 1.5E-180 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 XDD1_1188 3bce06fbc0bf26736759b07e2b5cfafc 486 PIRSF PIRSF016599 1 485 9.4E-210 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 XDD1_1188 3bce06fbc0bf26736759b07e2b5cfafc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 1.1E-95 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 XDD1_1188 3bce06fbc0bf26736759b07e2b5cfafc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 1.1E-95 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 XDD1_1188 3bce06fbc0bf26736759b07e2b5cfafc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 1.1E-95 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 XDD1_1188 3bce06fbc0bf26736759b07e2b5cfafc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 1.1E-95 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 XDD1_1188 3bce06fbc0bf26736759b07e2b5cfafc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 1.1E-95 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 XDD1_1188 3bce06fbc0bf26736759b07e2b5cfafc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 1.1E-95 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 XDD1_1188 3bce06fbc0bf26736759b07e2b5cfafc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 1.1E-95 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 XDD1_1188 3bce06fbc0bf26736759b07e2b5cfafc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 1.1E-95 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 XDD1_1188 3bce06fbc0bf26736759b07e2b5cfafc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 1.1E-95 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 XDD1_1188 3bce06fbc0bf26736759b07e2b5cfafc 486 Pfam PF01546 Peptidase family M20/M25/M40 72 480 1.2E-21 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 XDD1_0072 179a1865421a49f0c19e5d50bad4c75e 367 PRINTS PR00811 Bacterial general secretion pathway protein D signature 330 348 3.1E-11 T 15-10-2018 IPR001775 GspD/PilQ family XDD1_0072 179a1865421a49f0c19e5d50bad4c75e 367 PRINTS PR00811 Bacterial general secretion pathway protein D signature 353 367 3.1E-11 T 15-10-2018 IPR001775 GspD/PilQ family XDD1_0072 179a1865421a49f0c19e5d50bad4c75e 367 PRINTS PR00811 Bacterial general secretion pathway protein D signature 204 228 3.1E-11 T 15-10-2018 IPR001775 GspD/PilQ family XDD1_0072 179a1865421a49f0c19e5d50bad4c75e 367 Gene3D G3DSA:3.30.1370.120 52 141 6.1E-14 T 15-10-2018 IPR038591 NolW-like superfamily XDD1_0072 179a1865421a49f0c19e5d50bad4c75e 367 Pfam PF03958 Bacterial type II/III secretion system short domain 76 139 5.0E-7 T 15-10-2018 IPR005644 NolW-like XDD1_0072 179a1865421a49f0c19e5d50bad4c75e 367 Pfam PF00263 Bacterial type II and III secretion system protein 208 364 6.4E-44 T 15-10-2018 IPR004846 Type II/III secretion system GO:0009306 XDD1_0072 179a1865421a49f0c19e5d50bad4c75e 367 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 311 344 - T 15-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 XDD1_2981 c48c959afafd2ab47e3a75ebe283f824 198 Gene3D G3DSA:3.40.50.10420 6 196 7.7E-60 T 15-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily XDD1_2981 c48c959afafd2ab47e3a75ebe283f824 198 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 10 191 2.9E-48 T 15-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase XDD1_2981 c48c959afafd2ab47e3a75ebe283f824 198 PIRSF PIRSF006806 6 194 1.6E-42 T 15-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase XDD1_2981 c48c959afafd2ab47e3a75ebe283f824 198 SUPERFAMILY SSF100950 10 197 9.49E-59 T 15-10-2018 IPR037171 NagB/RpiA transferase-like XDD1_2981 c48c959afafd2ab47e3a75ebe283f824 198 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 10 191 9.8E-59 T 15-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase XDD1_3669 498f9499d0a844cd89893b2e4c4c8427 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 2.0E-5 T 15-10-2018 XDD1_3669 498f9499d0a844cd89893b2e4c4c8427 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 2.0E-5 T 15-10-2018 XDD1_3669 498f9499d0a844cd89893b2e4c4c8427 191 Pfam PF00117 Glutamine amidotransferase class-I 4 189 8.0E-54 T 15-10-2018 IPR017926 Glutamine amidotransferase XDD1_3669 498f9499d0a844cd89893b2e4c4c8427 191 Gene3D G3DSA:3.40.50.880 1 191 5.1E-59 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_3669 498f9499d0a844cd89893b2e4c4c8427 191 PRINTS PR00097 Anthranilate synthase component II signature 168 181 4.1E-36 T 15-10-2018 XDD1_3669 498f9499d0a844cd89893b2e4c4c8427 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 4.1E-36 T 15-10-2018 XDD1_3669 498f9499d0a844cd89893b2e4c4c8427 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 4.1E-36 T 15-10-2018 XDD1_3669 498f9499d0a844cd89893b2e4c4c8427 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 4.1E-36 T 15-10-2018 XDD1_3669 498f9499d0a844cd89893b2e4c4c8427 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 4.1E-36 T 15-10-2018 XDD1_3669 498f9499d0a844cd89893b2e4c4c8427 191 PRINTS PR00097 Anthranilate synthase component II signature 119 131 4.1E-36 T 15-10-2018 XDD1_3669 498f9499d0a844cd89893b2e4c4c8427 191 SUPERFAMILY SSF52317 1 190 2.82E-52 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_3669 498f9499d0a844cd89893b2e4c4c8427 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.2E-14 T 15-10-2018 XDD1_3669 498f9499d0a844cd89893b2e4c4c8427 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 7.2E-14 T 15-10-2018 XDD1_3669 498f9499d0a844cd89893b2e4c4c8427 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.2E-14 T 15-10-2018 XDD1_3669 498f9499d0a844cd89893b2e4c4c8427 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 190 2.2E-91 T 15-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XDD1_0861 68ce5c5ff8a08afcf8cfec8f4cd53678 304 Gene3D G3DSA:3.40.50.720 1 167 9.4E-55 T 15-10-2018 XDD1_0861 68ce5c5ff8a08afcf8cfec8f4cd53678 304 Gene3D G3DSA:1.10.1040.10 168 290 4.7E-44 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 XDD1_0861 68ce5c5ff8a08afcf8cfec8f4cd53678 304 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 142 1.1E-25 T 15-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain XDD1_0861 68ce5c5ff8a08afcf8cfec8f4cd53678 304 SUPERFAMILY SSF48179 169 289 6.12E-34 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XDD1_0861 68ce5c5ff8a08afcf8cfec8f4cd53678 304 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 3.4E-75 T 15-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 XDD1_0861 68ce5c5ff8a08afcf8cfec8f4cd53678 304 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 169 289 6.4E-35 T 15-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain XDD1_0861 68ce5c5ff8a08afcf8cfec8f4cd53678 304 SUPERFAMILY SSF51735 1 167 3.72E-57 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_3557 86b030499c2d99852847043226f9184b 151 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 151 6.4E-62 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 XDD1_3557 86b030499c2d99852847043226f9184b 151 Gene3D G3DSA:2.40.50.100 72 151 3.0E-31 T 15-10-2018 XDD1_3557 86b030499c2d99852847043226f9184b 151 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 107 124 - T 15-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XDD1_3557 86b030499c2d99852847043226f9184b 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 80 93 1.2E-18 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 XDD1_3557 86b030499c2d99852847043226f9184b 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 97 111 1.2E-18 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 XDD1_3557 86b030499c2d99852847043226f9184b 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 112 125 1.2E-18 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 XDD1_3557 86b030499c2d99852847043226f9184b 151 SUPERFAMILY SSF51230 76 151 1.83E-25 T 15-10-2018 IPR011053 Single hybrid motif XDD1_3557 86b030499c2d99852847043226f9184b 151 Pfam PF00364 Biotin-requiring enzyme 78 150 6.1E-25 T 15-10-2018 IPR000089 Biotin/lipoyl attachment XDD1_0044 69c705dbc65ec0f44fd42e83500df6e6 146 Pfam PF00258 Flavodoxin 7 138 1.1E-26 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 XDD1_0044 69c705dbc65ec0f44fd42e83500df6e6 146 PRINTS PR00369 Flavodoxin signature 51 62 1.8E-7 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XDD1_0044 69c705dbc65ec0f44fd42e83500df6e6 146 PRINTS PR00369 Flavodoxin signature 5 18 1.8E-7 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XDD1_0044 69c705dbc65ec0f44fd42e83500df6e6 146 PRINTS PR00369 Flavodoxin signature 106 125 1.8E-7 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XDD1_0044 69c705dbc65ec0f44fd42e83500df6e6 146 PRINTS PR00369 Flavodoxin signature 82 92 1.8E-7 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XDD1_0044 69c705dbc65ec0f44fd42e83500df6e6 146 Gene3D G3DSA:3.40.50.360 1 146 2.3E-48 T 15-10-2018 IPR029039 Flavoprotein-like superfamily XDD1_0044 69c705dbc65ec0f44fd42e83500df6e6 146 SUPERFAMILY SSF52218 1 146 1.2E-40 T 15-10-2018 IPR029039 Flavoprotein-like superfamily XDD1_1903 62f2f08dbf303a21c081988da6984fae 167 Pfam PF08534 Redoxin 20 163 2.2E-29 T 15-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 XDD1_1903 62f2f08dbf303a21c081988da6984fae 167 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 15-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 XDD1_1903 62f2f08dbf303a21c081988da6984fae 167 Hamap MF_00269 Thiol peroxidase [tpx]. 4 167 39.045 T 15-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 XDD1_1903 62f2f08dbf303a21c081988da6984fae 167 Gene3D G3DSA:3.40.30.10 1 167 6.1E-49 T 15-10-2018 XDD1_1903 62f2f08dbf303a21c081988da6984fae 167 SUPERFAMILY SSF52833 4 164 1.14E-43 T 15-10-2018 IPR036249 Thioredoxin-like superfamily XDD1_1370 5e7baaa8b50fdda3f3e97d0f0f0ead1f 328 Gene3D G3DSA:2.130.10.10 1 327 1.9E-115 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 XDD1_1370 5e7baaa8b50fdda3f3e97d0f0f0ead1f 328 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 328 52.532 T 15-10-2018 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 XDD1_1370 5e7baaa8b50fdda3f3e97d0f0f0ead1f 328 Pfam PF10282 Lactonase, 7-bladed beta-propeller 7 324 7.8E-82 T 15-10-2018 IPR019405 Lactonase, 7-bladed beta propeller XDD1_1370 5e7baaa8b50fdda3f3e97d0f0f0ead1f 328 SUPERFAMILY SSF50974 4 288 1.83E-48 T 15-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 XDD1_2142 61493fe6810bdce6b04ac97fecbb3515 497 Gene3D G3DSA:2.40.10.10 149 237 1.8E-6 T 15-10-2018 XDD1_2142 61493fe6810bdce6b04ac97fecbb3515 497 SUPERFAMILY SSF50494 7 275 3.13E-17 T 15-10-2018 IPR009003 Peptidase S1, PA clan XDD1_2142 61493fe6810bdce6b04ac97fecbb3515 497 Gene3D G3DSA:2.40.10.10 46 148 1.8E-6 T 15-10-2018 XDD1_2142 61493fe6810bdce6b04ac97fecbb3515 497 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 73 78 - T 15-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 XDD1_2142 61493fe6810bdce6b04ac97fecbb3515 497 Pfam PF13365 Trypsin-like peptidase domain 55 234 1.0E-7 T 15-10-2018 XDD1_2958 4cae4618415a20e3f4ce30d9c5930073 88 SUPERFAMILY SSF109910 2 78 7.72E-27 T 15-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily XDD1_2958 4cae4618415a20e3f4ce30d9c5930073 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 76 3.0E-24 T 15-10-2018 IPR005631 Flavinator of succinate dehydrogenase XDD1_2958 4cae4618415a20e3f4ce30d9c5930073 88 Gene3D G3DSA:1.10.150.250 1 88 1.0E-36 T 15-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily XDD1_1492 985e3a5f5365d725ae9904233dd66390 117 SUPERFAMILY SSF160631 41 114 5.1E-5 T 15-10-2018 XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 Gene3D G3DSA:3.30.70.240 612 682 2.0E-94 T 15-10-2018 XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 Pfam PF00679 Elongation factor G C-terminus 608 693 8.2E-31 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 700 0.0 T 15-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 SMART SM00889 487 606 1.8E-78 T 15-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 SUPERFAMILY SSF54980 411 488 3.2E-25 T 15-10-2018 IPR035647 EF-G domain III/V-like XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 186 4.6E-31 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 SUPERFAMILY SSF50447 271 411 1.59E-35 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 SUPERFAMILY SSF54980 608 698 4.8E-29 T 15-10-2018 IPR035647 EF-G domain III/V-like XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 Gene3D G3DSA:2.40.30.10 299 407 2.2E-44 T 15-10-2018 XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 Hamap MF_00054_B Elongation factor G [fusA]. 6 699 114.737 T 15-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 Gene3D G3DSA:3.30.70.870 412 487 7.4E-33 T 15-10-2018 XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 Gene3D G3DSA:3.30.230.10 491 695 2.0E-94 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 1.5E-67 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 Pfam PF03144 Elongation factor Tu domain 2 331 398 2.8E-17 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 Pfam PF03764 Elongation factor G, domain IV 486 606 2.9E-49 T 15-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 Pfam PF14492 Elongation Factor G, domain II 411 485 1.7E-34 T 15-10-2018 XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 SUPERFAMILY SSF54211 489 607 1.85E-46 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 SUPERFAMILY SSF52540 6 287 4.21E-106 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 Gene3D G3DSA:3.40.50.300 1 298 6.4E-116 T 15-10-2018 XDD1_3649 fb6ec08ae08b96256e9156aa88f9dffb 702 SMART SM00838 608 695 6.5E-59 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like XDD1_1691 9de0c7d142df4023a943808f3d6fd056 100 Gene3D G3DSA:1.10.3230.30 3 98 3.0E-13 T 15-10-2018 XDD1_1691 9de0c7d142df4023a943808f3d6fd056 100 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 8 98 2.9E-21 T 15-10-2018 IPR006450 Phage protein of unkonwn function XDD1_1691 9de0c7d142df4023a943808f3d6fd056 100 Pfam PF05135 Phage gp6-like head-tail connector protein 6 95 1.2E-16 T 15-10-2018 IPR021146 Phage gp6-like head-tail connector protein XDD1_0347 b35a5ecbcf5a1b62b5ebecb9c84fd14e 356 Pfam PF02706 Chain length determinant protein 18 84 4.7E-13 T 15-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 XDD1_0347 b35a5ecbcf5a1b62b5ebecb9c84fd14e 356 SUPERFAMILY SSF160355 56 321 9.42E-79 T 15-10-2018 XDD1_0347 b35a5ecbcf5a1b62b5ebecb9c84fd14e 356 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 10 350 55.667 T 15-10-2018 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 Gene3D G3DSA:3.40.50.880 9 206 2.4E-56 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 Gene3D G3DSA:3.40.50.620 209 405 6.0E-72 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 SUPERFAMILY SSF54810 405 525 3.27E-51 T 15-10-2018 XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 Gene3D G3DSA:3.30.300.10 406 525 2.6E-51 T 15-10-2018 XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 2.6E-83 T 15-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 1.3E-5 T 15-10-2018 XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 1.3E-5 T 15-10-2018 XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 1.3E-5 T 15-10-2018 XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 55.833 T 15-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 Pfam PF00958 GMP synthase C terminal domain 433 524 9.8E-44 T 15-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 Pfam PF00117 Glutamine amidotransferase class-I 12 200 3.3E-40 T 15-10-2018 IPR017926 Glutamine amidotransferase XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.9E-6 T 15-10-2018 XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.9E-6 T 15-10-2018 XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 1.9E-6 T 15-10-2018 XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.3E-7 T 15-10-2018 XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.3E-7 T 15-10-2018 XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.3E-7 T 15-10-2018 XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 525 3.0E-152 T 15-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 SUPERFAMILY SSF52402 193 446 3.09E-55 T 15-10-2018 XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 Pfam PF02540 NAD synthase 223 254 1.8E-4 T 15-10-2018 IPR022310 NAD/GMP synthase XDD1_2393 dbd217038e86777a8fbc1e86817411dc 525 SUPERFAMILY SSF52317 4 204 1.15E-54 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_1117 a66ef3aa40613d383ddceb7e943e7c4d 567 PIRSF PIRSF029745 2 567 4.7E-157 T 15-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 XDD1_1117 a66ef3aa40613d383ddceb7e943e7c4d 567 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 211 529 4.3E-111 T 15-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal XDD1_1117 a66ef3aa40613d383ddceb7e943e7c4d 567 Pfam PF08479 POTRA domain, ShlB-type 75 151 4.8E-21 T 15-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type XDD1_1117 a66ef3aa40613d383ddceb7e943e7c4d 567 Pfam PF17287 POTRA domain 152 206 1.6E-20 T 15-10-2018 IPR035251 ShlB, POTRA domain XDD1_1117 a66ef3aa40613d383ddceb7e943e7c4d 567 Gene3D G3DSA:2.40.160.50 184 567 6.5E-104 T 15-10-2018 XDD1_2372 da9cfc238153d8dd9d453cf73fafc59a 567 SMART SM00304 216 268 1.5E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 XDD1_2372 da9cfc238153d8dd9d453cf73fafc59a 567 SMART SM00283 269 516 1.9E-93 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 XDD1_2372 da9cfc238153d8dd9d453cf73fafc59a 567 SMART SM00319 44 182 4.4E-17 T 15-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 XDD1_2372 da9cfc238153d8dd9d453cf73fafc59a 567 Pfam PF00672 HAMP domain 217 263 3.8E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 XDD1_2372 da9cfc238153d8dd9d453cf73fafc59a 567 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 484 1.3E-58 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 XDD1_2372 da9cfc238153d8dd9d453cf73fafc59a 567 Gene3D G3DSA:1.10.287.950 216 518 6.5E-97 T 15-10-2018 XDD1_2372 da9cfc238153d8dd9d453cf73fafc59a 567 Pfam PF02203 Tar ligand binding domain homologue 1 175 1.1E-37 T 15-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 XDD1_2372 da9cfc238153d8dd9d453cf73fafc59a 567 SUPERFAMILY SSF47170 25 181 3.01E-32 T 15-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily XDD1_2372 da9cfc238153d8dd9d453cf73fafc59a 567 Gene3D G3DSA:1.20.120.30 22 193 2.5E-32 T 15-10-2018 XDD1_2372 da9cfc238153d8dd9d453cf73fafc59a 567 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 15-10-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site XDD1_2372 da9cfc238153d8dd9d453cf73fafc59a 567 SUPERFAMILY SSF58104 236 517 1.57E-75 T 15-10-2018 XDD1_2372 da9cfc238153d8dd9d453cf73fafc59a 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 2.3E-82 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XDD1_2372 da9cfc238153d8dd9d453cf73fafc59a 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 2.3E-82 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XDD1_2372 da9cfc238153d8dd9d453cf73fafc59a 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.3E-82 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XDD1_2372 da9cfc238153d8dd9d453cf73fafc59a 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 2.3E-82 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XDD1_2372 da9cfc238153d8dd9d453cf73fafc59a 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 2.3E-82 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XDD1_2372 da9cfc238153d8dd9d453cf73fafc59a 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 2.3E-82 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XDD1_2372 da9cfc238153d8dd9d453cf73fafc59a 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 2.3E-82 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XDD1_1736 cfd17b7086483b0c2f102b3be654828d 123 ProDom PD077599 YEBF LIPOPROTEIN EXPORTED PERIPLASMIC PRECURSOR SIGNAL SIMILAR PALMITATE MEMBRANE ESCHERICHIA 25 119 7.0E-35 T 15-10-2018 IPR025603 YebF/Colicin-M immunity protein XDD1_1736 cfd17b7086483b0c2f102b3be654828d 123 Pfam PF13995 YebF-like protein 32 120 4.0E-41 T 15-10-2018 IPR025603 YebF/Colicin-M immunity protein XDD1_1736 cfd17b7086483b0c2f102b3be654828d 123 Gene3D G3DSA:3.10.450.300 26 123 1.1E-39 T 15-10-2018 IPR038703 YebF/Cmi superfamily XDD1_2064 fe40c854c6648c3e37a6ab0b74095fde 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.553 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XDD1_2064 fe40c854c6648c3e37a6ab0b74095fde 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 15-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 XDD1_2064 fe40c854c6648c3e37a6ab0b74095fde 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 158 2.2E-81 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XDD1_2064 fe40c854c6648c3e37a6ab0b74095fde 173 Gene3D G3DSA:3.30.420.10 2 159 1.5E-55 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_2064 fe40c854c6648c3e37a6ab0b74095fde 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 3.7E-66 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XDD1_2064 fe40c854c6648c3e37a6ab0b74095fde 173 SUPERFAMILY SSF53098 3 157 1.19E-55 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_2064 fe40c854c6648c3e37a6ab0b74095fde 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 5.0E-44 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XDD1_2064 fe40c854c6648c3e37a6ab0b74095fde 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 5.0E-44 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XDD1_2064 fe40c854c6648c3e37a6ab0b74095fde 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 5.0E-44 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XDD1_2064 fe40c854c6648c3e37a6ab0b74095fde 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 5.0E-44 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XDD1_2064 fe40c854c6648c3e37a6ab0b74095fde 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 5.0E-44 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XDD1_2642 b329f8c301565468d4340c6cfc2a8230 143 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 5 137 2.6E-17 T 15-10-2018 IPR009936 Protein of unknown function DUF1468 XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 Pfam PF00271 Helicase conserved C-terminal domain 804 907 3.2E-17 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 32 1107 27.942 T 15-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1080 0.0 T 15-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 SUPERFAMILY SSF143517 993 1145 1.1E-43 T 15-10-2018 IPR037235 TRCF-like, C-terminal domain XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 SUPERFAMILY SSF52540 349 464 8.85E-27 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 SUPERFAMILY SSF141259 469 546 1.57E-23 T 15-10-2018 IPR036101 CarD-like/TRCF domain superfamily XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 SUPERFAMILY SSF52540 780 988 1.2E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 SUPERFAMILY SSF52540 521 781 1.16E-62 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 SMART SM00982 1006 1106 6.5E-48 T 15-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 SMART SM00490 824 908 1.6E-18 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 Gene3D G3DSA:3.40.50.11140 353 451 6.1E-33 T 15-10-2018 XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 SMART SM01058 477 574 2.2E-48 T 15-10-2018 IPR003711 CarD-like/TRCF domain XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 Gene3D G3DSA:3.40.50.11180 24 333 1.4E-123 T 15-10-2018 XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 Gene3D G3DSA:2.30.30.840 481 539 2.2E-234 T 15-10-2018 XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 Gene3D G3DSA:3.30.2060.10 128 213 1.4E-123 T 15-10-2018 XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 Gene3D G3DSA:3.40.50.300 540 779 2.2E-234 T 15-10-2018 XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 Pfam PF02559 CarD-like/TRCF domain 478 573 4.6E-25 T 15-10-2018 IPR003711 CarD-like/TRCF domain XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 Pfam PF03461 TRCF domain 1007 1099 5.4E-28 T 15-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 Gene3D G3DSA:3.40.50.300 476 988 2.2E-234 T 15-10-2018 XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 Gene3D G3DSA:3.90.1150.50 1002 1148 1.6E-46 T 15-10-2018 IPR037235 TRCF-like, C-terminal domain XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 Pfam PF00270 DEAD/DEAH box helicase 603 763 1.5E-19 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 SUPERFAMILY SSF52540 8 343 8.85E-98 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2488 04a5e740a4c2035b2e3827d488a1696a 1150 SMART SM00487 598 788 2.0E-33 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XDD1_1557 8559a9b91baf13fab6681996f8c1d1d4 164 SUPERFAMILY SSF46785 12 70 7.86E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1557 8559a9b91baf13fab6681996f8c1d1d4 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 58 4.6E-21 T 15-10-2018 XDD1_1557 8559a9b91baf13fab6681996f8c1d1d4 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 XDD1_1557 8559a9b91baf13fab6681996f8c1d1d4 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 XDD1_1557 8559a9b91baf13fab6681996f8c1d1d4 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 XDD1_1557 8559a9b91baf13fab6681996f8c1d1d4 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 3.1E-24 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain XDD1_1557 8559a9b91baf13fab6681996f8c1d1d4 164 SUPERFAMILY SSF54909 74 157 4.16E-22 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel XDD1_1557 8559a9b91baf13fab6681996f8c1d1d4 164 SMART SM00344 12 121 2.4E-54 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 XDD1_1557 8559a9b91baf13fab6681996f8c1d1d4 164 Gene3D G3DSA:1.10.10.10 1 63 2.4E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1557 8559a9b91baf13fab6681996f8c1d1d4 164 Gene3D G3DSA:3.30.70.920 64 159 3.3E-25 T 15-10-2018 XDD1_1557 8559a9b91baf13fab6681996f8c1d1d4 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 15-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site XDD1_1613 07952a43b15befca0e192430661e18c4 366 SUPERFAMILY SSF53254 164 358 6.77E-22 T 15-10-2018 IPR029033 Histidine phosphatase superfamily XDD1_1613 07952a43b15befca0e192430661e18c4 366 SMART SM00855 164 323 0.0019 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XDD1_1613 07952a43b15befca0e192430661e18c4 366 SUPERFAMILY SSF55729 3 161 4.05E-16 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_1613 07952a43b15befca0e192430661e18c4 366 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 167 361 1.3E-19 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XDD1_1613 07952a43b15befca0e192430661e18c4 366 Pfam PF00583 Acetyltransferase (GNAT) family 23 136 3.4E-9 T 15-10-2018 IPR000182 GNAT domain XDD1_1613 07952a43b15befca0e192430661e18c4 366 Gene3D G3DSA:3.40.630.30 5 156 7.7E-15 T 15-10-2018 XDD1_1613 07952a43b15befca0e192430661e18c4 366 Gene3D G3DSA:3.40.50.1240 163 364 4.7E-21 T 15-10-2018 IPR029033 Histidine phosphatase superfamily XDD1_1613 07952a43b15befca0e192430661e18c4 366 PIRSF PIRSF000709 69 339 1.7E-5 T 15-10-2018 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 Gene3D G3DSA:2.40.270.10 1034 1242 2.3E-93 T 15-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 Gene3D G3DSA:3.90.1110.10 157 270 1.9E-27 T 15-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 15-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 2.9E-56 T 15-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 Gene3D G3DSA:3.90.1800.10 1252 1306 8.1E-11 T 15-10-2018 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.354 T 15-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 Gene3D G3DSA:2.40.270.10 790 832 5.4E-7 T 15-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 Gene3D G3DSA:3.90.1100.10 646 713 4.3E-21 T 15-10-2018 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 Gene3D G3DSA:2.40.50.100 714 788 1.7E-32 T 15-10-2018 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.4E-30 T 15-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 1.9E-27 T 15-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 4.5E-161 T 15-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 SUPERFAMILY SSF64484 12 1341 0.0 T 15-10-2018 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 Gene3D G3DSA:3.90.1110.10 313 441 3.6E-37 T 15-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 2.4E-25 T 15-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 336 454 1.3E-16 T 15-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 287 6.2E-8 T 15-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 15-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 Gene3D G3DSA:3.90.1100.10 442 643 3.1E-71 T 15-10-2018 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 Gene3D G3DSA:3.90.1100.10 19 156 1.4E-48 T 15-10-2018 XDD1_3641 b9d3b7b93546bf5993538c69c2cac3fa 1342 Gene3D G3DSA:2.40.50.150 833 953 1.2E-44 T 15-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_1902 7eeed92f6a03c85e70159e897a8f67bb 640 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 8 526 8.9E-161 T 15-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset XDD1_1902 7eeed92f6a03c85e70159e897a8f67bb 640 SUPERFAMILY SSF69255 371 455 4.18E-28 T 15-10-2018 XDD1_1902 7eeed92f6a03c85e70159e897a8f67bb 640 Gene3D G3DSA:2.30.110.50 9 330 3.2E-91 T 15-10-2018 XDD1_1902 7eeed92f6a03c85e70159e897a8f67bb 640 SUPERFAMILY SSF69279 186 369 1.53E-33 T 15-10-2018 XDD1_1902 7eeed92f6a03c85e70159e897a8f67bb 640 SUPERFAMILY SSF69279 10 183 1.15E-49 T 15-10-2018 XDD1_1902 7eeed92f6a03c85e70159e897a8f67bb 640 Gene3D G3DSA:3.30.1920.30 224 285 3.2E-91 T 15-10-2018 XDD1_1902 7eeed92f6a03c85e70159e897a8f67bb 640 Pfam PF05954 Phage late control gene D protein (GPD) 25 328 6.9E-75 T 15-10-2018 XDD1_1902 7eeed92f6a03c85e70159e897a8f67bb 640 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 509 1.2E-121 T 15-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein XDD1_1902 7eeed92f6a03c85e70159e897a8f67bb 640 Gene3D G3DSA:3.55.50.10 97 187 3.2E-91 T 15-10-2018 XDD1_1902 7eeed92f6a03c85e70159e897a8f67bb 640 SUPERFAMILY SSF69349 446 628 2.51E-32 T 15-10-2018 XDD1_1902 7eeed92f6a03c85e70159e897a8f67bb 640 Gene3D G3DSA:2.40.50.230 360 461 1.1E-36 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XDD1_0232 cbf4af58c90a34432ec36ad761b6c18a 142 Pfam PF13612 Transposase DDE domain 1 106 7.3E-48 T 15-10-2018 IPR025668 Transposase DDE domain XDD1_0246 cbf4af58c90a34432ec36ad761b6c18a 142 Pfam PF13612 Transposase DDE domain 1 106 7.3E-48 T 15-10-2018 IPR025668 Transposase DDE domain XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 Gene3D G3DSA:3.30.70.1430 570 674 0.0 T 15-10-2018 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 Pfam PF00873 AcrB/AcrD/AcrF family 1 1032 0.0 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 SUPERFAMILY SSF82693 38 131 3.49E-27 T 15-10-2018 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 SUPERFAMILY SSF82693 673 861 2.88E-27 T 15-10-2018 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 5.8E-111 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 5.8E-111 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 5.8E-111 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 5.8E-111 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 5.8E-111 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 5.8E-111 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 5.8E-111 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 5.8E-111 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 5.8E-111 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 Gene3D G3DSA:3.30.70.1320 133 330 0.0 T 15-10-2018 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 Gene3D G3DSA:3.30.70.1430 38 824 0.0 T 15-10-2018 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 Gene3D G3DSA:3.30.70.1440 675 868 0.0 T 15-10-2018 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 SUPERFAMILY SSF82866 296 497 7.46E-48 T 15-10-2018 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 Gene3D G3DSA:3.30.2090.10 725 816 0.0 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1044 0.0 T 15-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 SUPERFAMILY SSF82693 135 330 6.41E-27 T 15-10-2018 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 SUPERFAMILY SSF82714 725 806 5.62E-19 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 SUPERFAMILY SSF82866 844 1032 3.14E-43 T 15-10-2018 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 SUPERFAMILY SSF82714 182 272 1.09E-22 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 SUPERFAMILY SSF82693 566 670 3.92E-31 T 15-10-2018 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 Gene3D G3DSA:1.20.1640.10 8 515 0.0 T 15-10-2018 XDD1_0897 0da3b283c2147c655c8367513699bd09 1049 Gene3D G3DSA:1.20.1640.10 516 1029 0.0 T 15-10-2018 XDD1_1583 f2e49498ca77c5dfa90a30431a0b9b0b 440 SUPERFAMILY SSF140570 119 281 4.05E-73 T 15-10-2018 IPR036141 MukF, middle domain superfamily XDD1_1583 f2e49498ca77c5dfa90a30431a0b9b0b 440 SUPERFAMILY SSF46785 8 118 1.81E-48 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1583 f2e49498ca77c5dfa90a30431a0b9b0b 440 Gene3D G3DSA:1.20.58.590 119 311 7.8E-86 T 15-10-2018 IPR036141 MukF, middle domain superfamily XDD1_1583 f2e49498ca77c5dfa90a30431a0b9b0b 440 Pfam PF17193 MukF C-terminal domain 283 440 2.5E-78 T 15-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain XDD1_1583 f2e49498ca77c5dfa90a30431a0b9b0b 440 Gene3D G3DSA:1.10.225.40 353 440 2.3E-41 T 15-10-2018 IPR038198 MukF, C-terminal domain superfamily XDD1_1583 f2e49498ca77c5dfa90a30431a0b9b0b 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 53.991 T 15-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 XDD1_1583 f2e49498ca77c5dfa90a30431a0b9b0b 440 Pfam PF03882 MukF winged-helix domain 3 117 2.0E-57 T 15-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain XDD1_1583 f2e49498ca77c5dfa90a30431a0b9b0b 440 Gene3D G3DSA:1.10.10.10 24 118 4.6E-51 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1583 f2e49498ca77c5dfa90a30431a0b9b0b 440 Pfam PF17192 MukF middle domain 121 281 2.7E-83 T 15-10-2018 IPR033440 Chromosome partition protein MukF, middle domain XDD1_1583 f2e49498ca77c5dfa90a30431a0b9b0b 440 PIRSF PIRSF018282 1 440 2.0E-248 T 15-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 XDD1_2214 7c60df300ab15c2676fbc5ccfba96c4d 291 Pfam PF02811 PHP domain 14 81 1.8E-9 T 15-10-2018 IPR004013 PHP domain GO:0003824 XDD1_2214 7c60df300ab15c2676fbc5ccfba96c4d 291 Gene3D G3DSA:3.20.20.140 14 260 1.9E-79 T 15-10-2018 XDD1_2214 7c60df300ab15c2676fbc5ccfba96c4d 291 SUPERFAMILY SSF89550 9 288 6.41E-55 T 15-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 XDD1_2214 7c60df300ab15c2676fbc5ccfba96c4d 291 Gene3D G3DSA:1.10.150.650 108 179 1.9E-79 T 15-10-2018 XDD1_2214 7c60df300ab15c2676fbc5ccfba96c4d 291 SMART SM00481 13 80 3.0E-20 T 15-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal XDD1_0259 95132f59f78ce4de5266cb0c29751c05 309 Gene3D G3DSA:1.10.10.10 1 88 6.3E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0259 95132f59f78ce4de5266cb0c29751c05 309 SUPERFAMILY SSF46785 5 86 1.04E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_0259 95132f59f78ce4de5266cb0c29751c05 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 9.9E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0259 95132f59f78ce4de5266cb0c29751c05 309 Gene3D G3DSA:3.40.190.10 95 284 3.7E-73 T 15-10-2018 XDD1_0259 95132f59f78ce4de5266cb0c29751c05 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.1E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0259 95132f59f78ce4de5266cb0c29751c05 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.1E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0259 95132f59f78ce4de5266cb0c29751c05 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.1E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0259 95132f59f78ce4de5266cb0c29751c05 309 SUPERFAMILY SSF53850 93 300 5.58E-43 T 15-10-2018 XDD1_0259 95132f59f78ce4de5266cb0c29751c05 309 Pfam PF03466 LysR substrate binding domain 92 296 2.9E-49 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_0259 95132f59f78ce4de5266cb0c29751c05 309 Gene3D G3DSA:3.40.190.10 168 271 3.7E-73 T 15-10-2018 XDD1_2457 803a9a2b8359bb009bc3be4aa58f41b9 460 Pfam PF00672 HAMP domain 180 227 1.0E-11 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 XDD1_2457 803a9a2b8359bb009bc3be4aa58f41b9 460 Gene3D G3DSA:3.30.565.10 300 455 5.9E-38 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_2457 803a9a2b8359bb009bc3be4aa58f41b9 460 SMART SM00388 232 296 1.3E-12 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_2457 803a9a2b8359bb009bc3be4aa58f41b9 460 SUPERFAMILY SSF158472 179 228 3.01E-10 T 15-10-2018 XDD1_2457 803a9a2b8359bb009bc3be4aa58f41b9 460 Gene3D G3DSA:1.10.287.130 178 288 3.4E-25 T 15-10-2018 XDD1_2457 803a9a2b8359bb009bc3be4aa58f41b9 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 292 3.0E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_2457 803a9a2b8359bb009bc3be4aa58f41b9 460 SMART SM00304 179 231 6.2E-13 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 XDD1_2457 803a9a2b8359bb009bc3be4aa58f41b9 460 SUPERFAMILY SSF55874 285 454 1.57E-40 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_2457 803a9a2b8359bb009bc3be4aa58f41b9 460 SMART SM00387 341 453 6.5E-30 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_2457 803a9a2b8359bb009bc3be4aa58f41b9 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 406 2.6E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2457 803a9a2b8359bb009bc3be4aa58f41b9 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 450 2.6E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2457 803a9a2b8359bb009bc3be4aa58f41b9 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 2.6E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2457 803a9a2b8359bb009bc3be4aa58f41b9 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 2.6E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2457 803a9a2b8359bb009bc3be4aa58f41b9 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 451 9.8E-20 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_2457 803a9a2b8359bb009bc3be4aa58f41b9 460 SUPERFAMILY SSF47384 215 295 8.44E-14 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XDD1_3232 8c744f476030f621ced85eb8cef17ddd 469 SUPERFAMILY SSF48024 23 134 1.57E-38 T 15-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 XDD1_3232 8c744f476030f621ced85eb8cef17ddd 469 Gene3D G3DSA:3.40.50.300 182 461 3.6E-106 T 15-10-2018 XDD1_3232 8c744f476030f621ced85eb8cef17ddd 469 Pfam PF00772 DnaB-like helicase N terminal domain 25 126 1.6E-37 T 15-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 XDD1_3232 8c744f476030f621ced85eb8cef17ddd 469 Pfam PF03796 DnaB-like helicase C terminal domain 204 460 2.7E-111 T 15-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 XDD1_3232 8c744f476030f621ced85eb8cef17ddd 469 Gene3D G3DSA:1.10.860.10 18 181 4.2E-55 T 15-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal XDD1_3232 8c744f476030f621ced85eb8cef17ddd 469 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 24 462 5.0E-176 T 15-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 XDD1_3232 8c744f476030f621ced85eb8cef17ddd 469 SMART SM00382 221 427 9.7E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3232 8c744f476030f621ced85eb8cef17ddd 469 SUPERFAMILY SSF52540 202 453 3.95E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0053 9e3d14d2543ff25dae676bc2bf424be0 333 SUPERFAMILY SSF53822 60 331 8.92E-90 T 15-10-2018 IPR028082 Periplasmic binding protein-like I XDD1_0053 9e3d14d2543ff25dae676bc2bf424be0 333 Gene3D G3DSA:3.40.50.2300 161 323 3.8E-84 T 15-10-2018 XDD1_0053 9e3d14d2543ff25dae676bc2bf424be0 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 15-10-2018 XDD1_0053 9e3d14d2543ff25dae676bc2bf424be0 333 Pfam PF13377 Periplasmic binding protein-like domain 170 330 7.9E-42 T 15-10-2018 XDD1_0053 9e3d14d2543ff25dae676bc2bf424be0 333 Gene3D G3DSA:3.40.50.2300 70 322 3.8E-84 T 15-10-2018 XDD1_0053 9e3d14d2543ff25dae676bc2bf424be0 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.8E-22 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_0053 9e3d14d2543ff25dae676bc2bf424be0 333 Gene3D G3DSA:1.10.260.40 3 59 9.0E-25 T 15-10-2018 XDD1_0053 9e3d14d2543ff25dae676bc2bf424be0 333 SUPERFAMILY SSF47413 2 59 2.7E-18 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_0053 9e3d14d2543ff25dae676bc2bf424be0 333 SMART SM00354 1 71 6.2E-37 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_0053 9e3d14d2543ff25dae676bc2bf424be0 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.3E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_0053 9e3d14d2543ff25dae676bc2bf424be0 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.3E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_2932 ed675bd8c1189682628963bedf920a62 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 241 5.6E-68 T 15-10-2018 XDD1_2932 ed675bd8c1189682628963bedf920a62 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.3E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2932 ed675bd8c1189682628963bedf920a62 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.3E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2932 ed675bd8c1189682628963bedf920a62 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.3E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2932 ed675bd8c1189682628963bedf920a62 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.3E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2932 ed675bd8c1189682628963bedf920a62 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.3E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2932 ed675bd8c1189682628963bedf920a62 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.3E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2932 ed675bd8c1189682628963bedf920a62 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 6.3E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2932 ed675bd8c1189682628963bedf920a62 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.3E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2932 ed675bd8c1189682628963bedf920a62 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 6.3E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2932 ed675bd8c1189682628963bedf920a62 248 Gene3D G3DSA:3.40.50.720 1 247 2.1E-80 T 15-10-2018 XDD1_2932 ed675bd8c1189682628963bedf920a62 248 SUPERFAMILY SSF51735 6 243 2.88E-78 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2527 91cdbc2caeab7f214b100b0282a5c791 139 Gene3D G3DSA:3.90.79.10 2 133 2.0E-37 T 15-10-2018 XDD1_2527 91cdbc2caeab7f214b100b0282a5c791 139 PRINTS PR00502 NUDIX hydrolase family signature 31 45 2.0E-5 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 XDD1_2527 91cdbc2caeab7f214b100b0282a5c791 139 PRINTS PR00502 NUDIX hydrolase family signature 45 60 2.0E-5 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 XDD1_2527 91cdbc2caeab7f214b100b0282a5c791 139 SUPERFAMILY SSF55811 3 134 8.12E-32 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XDD1_2527 91cdbc2caeab7f214b100b0282a5c791 139 Pfam PF00293 NUDIX domain 5 127 8.7E-25 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XDD1_2527 91cdbc2caeab7f214b100b0282a5c791 139 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XDD1_1859 9fa28458739729f846eb22d09fec341e 126 Pfam PF00462 Glutaredoxin 32 96 5.4E-18 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 XDD1_1859 9fa28458739729f846eb22d09fec341e 126 PIRSF PIRSF005894 13 123 1.2E-50 T 15-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 XDD1_1859 9fa28458739729f846eb22d09fec341e 126 Gene3D G3DSA:3.40.30.10 16 123 8.4E-32 T 15-10-2018 XDD1_1859 9fa28458739729f846eb22d09fec341e 126 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 20 116 6.1E-46 T 15-10-2018 IPR004480 Monothiol glutaredoxin-related XDD1_1859 9fa28458739729f846eb22d09fec341e 126 SUPERFAMILY SSF52833 19 117 1.22E-33 T 15-10-2018 IPR036249 Thioredoxin-like superfamily XDD1_3175 b5a2b202cf305018654e1d81637fd5c4 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 1.6E-32 T 15-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 XDD1_3175 b5a2b202cf305018654e1d81637fd5c4 120 Gene3D G3DSA:3.30.479.10 1 120 4.6E-49 T 15-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 XDD1_3175 b5a2b202cf305018654e1d81637fd5c4 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 119 6.0E-34 T 15-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 XDD1_3175 b5a2b202cf305018654e1d81637fd5c4 120 SUPERFAMILY SSF55620 2 119 8.89E-40 T 15-10-2018 XDD1_3175 b5a2b202cf305018654e1d81637fd5c4 120 PIRSF PIRSF006113 1 120 1.5E-53 T 15-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 XDD1_3585 b6e246094bcd364825e4f17737509935 366 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 XDD1_3585 b6e246094bcd364825e4f17737509935 366 Gene3D G3DSA:3.40.50.1970 2 159 1.7E-44 T 15-10-2018 XDD1_3585 b6e246094bcd364825e4f17737509935 366 PIRSF PIRSF000112 1 362 1.1E-94 T 15-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 XDD1_3585 b6e246094bcd364825e4f17737509935 366 SUPERFAMILY SSF56796 2 360 1.7E-88 T 15-10-2018 XDD1_3585 b6e246094bcd364825e4f17737509935 366 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 350 8.9E-66 T 15-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 XDD1_3585 b6e246094bcd364825e4f17737509935 366 Gene3D G3DSA:1.20.1090.10 160 366 3.5E-79 T 15-10-2018 XDD1_3658 a2b9cf538873e08d24f9038a0979ea1f 179 Gene3D G3DSA:2.40.10.330 71 121 9.4E-59 T 15-10-2018 XDD1_3658 a2b9cf538873e08d24f9038a0979ea1f 179 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 8.9E-10 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain XDD1_3658 a2b9cf538873e08d24f9038a0979ea1f 179 SUPERFAMILY SSF54534 2 140 1.28E-30 T 15-10-2018 XDD1_3658 a2b9cf538873e08d24f9038a0979ea1f 179 Gene3D G3DSA:3.10.50.40 3 154 9.4E-59 T 15-10-2018 XDD1_2842 d0bcb6a9740ee0a11476a6eabf4753d9 743 Pfam PF10145 Phage-related minor tail protein 86 285 2.8E-15 T 15-10-2018 IPR010090 Phage tail tape measure protein XDD1_2842 d0bcb6a9740ee0a11476a6eabf4753d9 743 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 58 386 2.8E-16 T 15-10-2018 IPR010090 Phage tail tape measure protein XDD1_3430 d0bcb6a9740ee0a11476a6eabf4753d9 743 Pfam PF10145 Phage-related minor tail protein 86 285 2.8E-15 T 15-10-2018 IPR010090 Phage tail tape measure protein XDD1_3430 d0bcb6a9740ee0a11476a6eabf4753d9 743 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 58 386 2.8E-16 T 15-10-2018 IPR010090 Phage tail tape measure protein XDD1_1933 a0193263ccaccaa03569db3e60717b63 279 Pfam PF13803 Domain of unknown function (DUF4184) 26 264 4.6E-55 T 15-10-2018 IPR025238 Protein of unknown function DUF4184 XDD1_0979 db685f6daac3515b4f97a77ed0eadfc7 444 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 125 153 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 XDD1_0979 db685f6daac3515b4f97a77ed0eadfc7 444 Gene3D G3DSA:3.10.350.10 397 443 2.1E-12 T 15-10-2018 IPR036779 LysM domain superfamily XDD1_0979 db685f6daac3515b4f97a77ed0eadfc7 444 Gene3D G3DSA:1.10.530.10 101 257 9.1E-35 T 15-10-2018 XDD1_0979 db685f6daac3515b4f97a77ed0eadfc7 444 SUPERFAMILY SSF53955 103 254 6.38E-44 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily XDD1_0979 db685f6daac3515b4f97a77ed0eadfc7 444 Gene3D G3DSA:3.10.350.10 344 396 2.9E-15 T 15-10-2018 IPR036779 LysM domain superfamily XDD1_0979 db685f6daac3515b4f97a77ed0eadfc7 444 Pfam PF01476 LysM domain 399 436 1.2E-10 T 15-10-2018 IPR018392 LysM domain XDD1_0979 db685f6daac3515b4f97a77ed0eadfc7 444 Pfam PF01476 LysM domain 349 391 2.0E-14 T 15-10-2018 IPR018392 LysM domain XDD1_0979 db685f6daac3515b4f97a77ed0eadfc7 444 SUPERFAMILY SSF54106 396 442 3.01E-9 T 15-10-2018 XDD1_0979 db685f6daac3515b4f97a77ed0eadfc7 444 SUPERFAMILY SSF54106 348 391 2.49E-10 T 15-10-2018 XDD1_0979 db685f6daac3515b4f97a77ed0eadfc7 444 Pfam PF01464 Transglycosylase SLT domain 107 218 2.7E-28 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 XDD1_0979 db685f6daac3515b4f97a77ed0eadfc7 444 SMART SM00257 348 392 4.7E-14 T 15-10-2018 IPR018392 LysM domain XDD1_0979 db685f6daac3515b4f97a77ed0eadfc7 444 SMART SM00257 398 442 1.4E-9 T 15-10-2018 IPR018392 LysM domain XDD1_3811 0c7a61d7b1b93ce0d98028beeea76584 305 Pfam PF00583 Acetyltransferase (GNAT) family 21 122 3.6E-13 T 15-10-2018 IPR000182 GNAT domain XDD1_3811 0c7a61d7b1b93ce0d98028beeea76584 305 SUPERFAMILY SSF54637 155 297 1.85E-39 T 15-10-2018 IPR029069 HotDog domain superfamily XDD1_3811 0c7a61d7b1b93ce0d98028beeea76584 305 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 298 2.4E-48 T 15-10-2018 IPR012660 Thioesterase, putative XDD1_3811 0c7a61d7b1b93ce0d98028beeea76584 305 Gene3D G3DSA:3.10.129.10 148 298 3.2E-44 T 15-10-2018 XDD1_3811 0c7a61d7b1b93ce0d98028beeea76584 305 Gene3D G3DSA:3.40.630.30 2 145 3.2E-24 T 15-10-2018 XDD1_3811 0c7a61d7b1b93ce0d98028beeea76584 305 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 158 297 5.4E-49 T 15-10-2018 IPR012660 Thioesterase, putative XDD1_3811 0c7a61d7b1b93ce0d98028beeea76584 305 SUPERFAMILY SSF55729 2 145 1.17E-25 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_0784 002f2547d142cf28b3ece7c5b1fe5faa 293 SUPERFAMILY SSF46689 5 55 2.65E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0784 002f2547d142cf28b3ece7c5b1fe5faa 293 Gene3D G3DSA:1.10.10.60 56 121 1.4E-20 T 15-10-2018 XDD1_0784 002f2547d142cf28b3ece7c5b1fe5faa 293 SMART SM00342 21 104 1.7E-32 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_0784 002f2547d142cf28b3ece7c5b1fe5faa 293 SMART SM00871 126 292 8.2E-8 T 15-10-2018 IPR010499 Bacterial transcription activator, effector binding XDD1_0784 002f2547d142cf28b3ece7c5b1fe5faa 293 Gene3D G3DSA:3.20.80.10 123 293 3.2E-39 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily XDD1_0784 002f2547d142cf28b3ece7c5b1fe5faa 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 XDD1_0784 002f2547d142cf28b3ece7c5b1fe5faa 293 Gene3D G3DSA:1.10.10.60 3 55 5.6E-27 T 15-10-2018 XDD1_0784 002f2547d142cf28b3ece7c5b1fe5faa 293 SUPERFAMILY SSF46689 57 107 8.06E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0784 002f2547d142cf28b3ece7c5b1fe5faa 293 Pfam PF14526 Integron-associated effector binding protein 131 291 2.0E-13 T 15-10-2018 IPR029441 Integron-associated effector binding protein XDD1_0784 002f2547d142cf28b3ece7c5b1fe5faa 293 SUPERFAMILY SSF55136 125 292 4.97E-36 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily XDD1_0784 002f2547d142cf28b3ece7c5b1fe5faa 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 2.9E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 XDD1_0784 002f2547d142cf28b3ece7c5b1fe5faa 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 2.9E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 XDD1_0784 002f2547d142cf28b3ece7c5b1fe5faa 293 Pfam PF12833 Helix-turn-helix domain 27 105 2.4E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_2910 5bc53c86fab5bbb2c3753ad4245ded26 112 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 36 112 2.1E-31 T 15-10-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly XDD1_3664 54149b489b1abf25d0ca62c6dc21eeb7 201 Pfam PF01810 LysE type translocator 15 190 1.5E-15 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 SUPERFAMILY SSF52540 5 415 9.51E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 PRINTS PR00906 SecA protein signature 413 426 7.9E-74 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 PRINTS PR00906 SecA protein signature 101 115 7.9E-74 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 PRINTS PR00906 SecA protein signature 170 190 7.9E-74 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 PRINTS PR00906 SecA protein signature 339 361 7.9E-74 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 PRINTS PR00906 SecA protein signature 63 87 7.9E-74 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 PRINTS PR00906 SecA protein signature 376 393 7.9E-74 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 PRINTS PR00906 SecA protein signature 117 127 7.9E-74 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 SMART SM00958 228 358 1.6E-82 T 15-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.999 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 Pfam PF02810 SEC-C motif 883 901 1.1E-10 T 15-10-2018 IPR004027 SEC-C motif XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 Pfam PF07517 SecA DEAD-like domain 7 402 2.4E-132 T 15-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 SUPERFAMILY SSF81767 227 368 4.71E-44 T 15-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 SUPERFAMILY SSF81886 620 891 1.7E-85 T 15-10-2018 IPR036266 SecA, Wing/Scaffold superfamily XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 SMART SM00957 6 402 0.0 T 15-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 SUPERFAMILY SSF52540 416 618 1.8E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 Pfam PF01043 SecA preprotein cross-linking domain 232 358 3.3E-39 T 15-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 ProSitePatterns PS01312 SecA family signature. 500 515 - T 15-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 Gene3D G3DSA:1.10.3060.10 621 833 1.7E-83 T 15-10-2018 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 Gene3D G3DSA:3.40.50.300 417 620 6.6E-89 T 15-10-2018 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 Pfam PF07516 SecA Wing and Scaffold domain 617 830 1.8E-68 T 15-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 Gene3D G3DSA:3.90.1440.10 229 368 4.8E-177 T 15-10-2018 XDD1_3009 81975fe90c3d812b353526b79f2064aa 902 Gene3D G3DSA:3.40.50.300 22 415 4.8E-177 T 15-10-2018 XDD1_1038 49d12fd29d95003da4c04e87aa8fe206 333 SUPERFAMILY SSF56601 20 327 2.25E-61 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XDD1_1038 49d12fd29d95003da4c04e87aa8fe206 333 Pfam PF00144 Beta-lactamase 23 305 2.0E-25 T 15-10-2018 IPR001466 Beta-lactamase-related XDD1_1038 49d12fd29d95003da4c04e87aa8fe206 333 Gene3D G3DSA:3.40.710.10 5 319 6.8E-63 T 15-10-2018 XDD1_0448 f1887f6589932c70d1ea9a71f53b5f1c 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 5.2E-24 T 15-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like XDD1_0448 f1887f6589932c70d1ea9a71f53b5f1c 115 Gene3D G3DSA:3.10.490.10 1 115 1.3E-41 T 15-10-2018 XDD1_0448 f1887f6589932c70d1ea9a71f53b5f1c 115 SUPERFAMILY SSF110857 1 112 1.31E-33 T 15-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily XDD1_1894 174001bc384a5ed46f377324aaf50189 405 Pfam PF00691 OmpA family 292 390 1.8E-17 T 15-10-2018 IPR006665 OmpA-like domain XDD1_1894 174001bc384a5ed46f377324aaf50189 405 Gene3D G3DSA:3.30.1330.60 251 399 6.0E-40 T 15-10-2018 IPR036737 OmpA-like domain superfamily XDD1_1894 174001bc384a5ed46f377324aaf50189 405 Gene3D G3DSA:1.25.40.590 19 177 4.8E-56 T 15-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily XDD1_1894 174001bc384a5ed46f377324aaf50189 405 Pfam PF09850 Type VI secretion system protein DotU 22 224 3.0E-69 T 15-10-2018 IPR017732 Type IV / VI secretion system, DotU XDD1_1894 174001bc384a5ed46f377324aaf50189 405 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 261 395 1.6E-43 T 15-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain XDD1_1894 174001bc384a5ed46f377324aaf50189 405 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 21 229 2.3E-68 T 15-10-2018 IPR017732 Type IV / VI secretion system, DotU XDD1_1894 174001bc384a5ed46f377324aaf50189 405 SUPERFAMILY SSF103088 282 396 2.88E-29 T 15-10-2018 IPR036737 OmpA-like domain superfamily XDD1_0166 00534f32ddc3cd9bd429a6e227223973 461 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 10 136 1.4E-33 T 15-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0166 00534f32ddc3cd9bd429a6e227223973 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 5.3E-26 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0166 00534f32ddc3cd9bd429a6e227223973 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 213 226 5.3E-26 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0166 00534f32ddc3cd9bd429a6e227223973 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 5.3E-26 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0166 00534f32ddc3cd9bd429a6e227223973 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 5.3E-26 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0166 00534f32ddc3cd9bd429a6e227223973 461 Gene3D G3DSA:3.40.120.10 259 376 1.1E-34 T 15-10-2018 XDD1_0166 00534f32ddc3cd9bd429a6e227223973 461 SUPERFAMILY SSF53738 157 265 3.14E-23 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0166 00534f32ddc3cd9bd429a6e227223973 461 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 382 453 3.1E-7 T 15-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0166 00534f32ddc3cd9bd429a6e227223973 461 SUPERFAMILY SSF55957 376 460 1.05E-17 T 15-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0166 00534f32ddc3cd9bd429a6e227223973 461 Gene3D G3DSA:3.40.120.10 176 258 1.0E-23 T 15-10-2018 XDD1_0166 00534f32ddc3cd9bd429a6e227223973 461 Gene3D G3DSA:3.30.310.50 378 459 7.1E-25 T 15-10-2018 XDD1_0166 00534f32ddc3cd9bd429a6e227223973 461 Gene3D G3DSA:3.40.120.10 7 151 5.3E-48 T 15-10-2018 XDD1_0166 00534f32ddc3cd9bd429a6e227223973 461 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 15-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0166 00534f32ddc3cd9bd429a6e227223973 461 SUPERFAMILY SSF53738 8 180 5.89E-36 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0166 00534f32ddc3cd9bd429a6e227223973 461 SUPERFAMILY SSF53738 267 373 1.14E-30 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0166 00534f32ddc3cd9bd429a6e227223973 461 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 374 8.3E-22 T 15-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_0166 00534f32ddc3cd9bd429a6e227223973 461 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 262 6.9E-18 T 15-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.2E-49 T 15-10-2018 IPR013842 GTP-binding protein LepA, C-terminal XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 Pfam PF00679 Elongation factor G C-terminus 399 482 4.3E-19 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 Gene3D G3DSA:3.30.70.3380 368 478 1.2E-39 T 15-10-2018 XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 Gene3D G3DSA:2.40.30.10 186 285 3.5E-34 T 15-10-2018 XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 2.2E-52 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 SUPERFAMILY SSF54980 399 493 2.83E-24 T 15-10-2018 IPR035647 EF-G domain III/V-like XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 174 2.5E-17 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 Gene3D G3DSA:3.30.70.870 286 367 2.8E-35 T 15-10-2018 XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 SUPERFAMILY SSF52540 2 235 1.81E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.179 T 15-10-2018 IPR006297 Elongation factor 4 GO:0005525 XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 Gene3D G3DSA:3.30.70.2570 479 553 1.0E-33 T 15-10-2018 IPR038363 LepA, C-terminal domain superfamily XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 Gene3D G3DSA:3.40.50.300 1 185 3.7E-70 T 15-10-2018 XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 1.7E-301 T 15-10-2018 IPR006297 Elongation factor 4 GO:0005525 XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 SUPERFAMILY SSF54980 292 370 1.94E-18 T 15-10-2018 IPR035647 EF-G domain III/V-like XDD1_2812 0df8da9e2fe2612eec93f8740edde93b 598 Pfam PF03144 Elongation factor Tu domain 2 205 275 1.8E-11 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XDD1_3773 6bfe325aa09b57177cf6a56006fe680f 720 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 10 718 3.3E-273 T 15-10-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 XDD1_3773 6bfe325aa09b57177cf6a56006fe680f 720 Gene3D G3DSA:3.40.720.10 38 202 1.6E-30 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 XDD1_3773 6bfe325aa09b57177cf6a56006fe680f 720 Gene3D G3DSA:3.40.720.10 268 511 9.0E-50 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 XDD1_3773 6bfe325aa09b57177cf6a56006fe680f 720 Pfam PF05506 Domain of unknown function (DUF756) 635 704 3.8E-11 T 15-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 XDD1_3773 6bfe325aa09b57177cf6a56006fe680f 720 Pfam PF05506 Domain of unknown function (DUF756) 535 619 1.1E-20 T 15-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 XDD1_3773 6bfe325aa09b57177cf6a56006fe680f 720 Pfam PF04185 Phosphoesterase family 49 462 5.1E-108 T 15-10-2018 IPR007312 Phosphoesterase GO:0016788 XDD1_3809 409c6366a8b7ad424d8f9c7b73e574d2 461 TIGRFAM TIGR03173 pbuX: xanthine permease 38 458 6.2E-125 T 15-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 XDD1_3809 409c6366a8b7ad424d8f9c7b73e574d2 461 Pfam PF00860 Permease family 34 425 9.6E-104 T 15-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 XDD1_3809 409c6366a8b7ad424d8f9c7b73e574d2 461 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 374 394 - T 15-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 XDD1_3809 409c6366a8b7ad424d8f9c7b73e574d2 461 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 456 1.9E-134 T 15-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 XDD1_1035 c663ba55997dffe88612aee4736408cd 503 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 4 484 4.1E-207 T 15-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 XDD1_1035 c663ba55997dffe88612aee4736408cd 503 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 XDD1_1035 c663ba55997dffe88612aee4736408cd 503 Gene3D G3DSA:3.40.605.10 24 461 1.7E-153 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 XDD1_1035 c663ba55997dffe88612aee4736408cd 503 Gene3D G3DSA:3.40.309.10 249 453 1.7E-153 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 XDD1_1035 c663ba55997dffe88612aee4736408cd 503 Pfam PF00171 Aldehyde dehydrogenase family 14 480 8.0E-142 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 XDD1_1035 c663ba55997dffe88612aee4736408cd 503 SUPERFAMILY SSF53720 2 484 5.5E-152 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XDD1_2579 3b035e00fbb91706dda4444b051f769a 323 SUPERFAMILY SSF141868 78 321 1.26E-72 T 15-10-2018 IPR035919 EAL domain superfamily XDD1_2579 3b035e00fbb91706dda4444b051f769a 323 SMART SM00052 71 317 6.0E-81 T 15-10-2018 IPR001633 EAL domain XDD1_2579 3b035e00fbb91706dda4444b051f769a 323 Gene3D G3DSA:3.20.20.450 74 323 1.4E-78 T 15-10-2018 IPR035919 EAL domain superfamily XDD1_2579 3b035e00fbb91706dda4444b051f769a 323 Pfam PF00563 EAL domain 79 312 4.0E-62 T 15-10-2018 IPR001633 EAL domain XDD1_1082 15f7f520b5ccf7a2ff2752422909da8e 177 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 58 160 2.2E-41 T 15-10-2018 IPR022260 Integrating conjugative element protein PilL, PFGI-1 XDD1_0302 a43cd707a2b1bf96e0270c166b436b2d 118 Gene3D G3DSA:1.10.8.50 1 71 2.4E-28 T 15-10-2018 XDD1_0302 a43cd707a2b1bf96e0270c166b436b2d 118 PIRSF PIRSF002134 1 118 2.8E-43 T 15-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0302 a43cd707a2b1bf96e0270c166b436b2d 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.766 T 15-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0302 a43cd707a2b1bf96e0270c166b436b2d 118 SUPERFAMILY SSF46946 2 114 5.0E-47 T 15-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 XDD1_0302 a43cd707a2b1bf96e0270c166b436b2d 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.2E-54 T 15-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0302 a43cd707a2b1bf96e0270c166b436b2d 118 Gene3D G3DSA:4.10.910.10 72 118 1.7E-26 T 15-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0302 a43cd707a2b1bf96e0270c166b436b2d 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 15-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0302 a43cd707a2b1bf96e0270c166b436b2d 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.3E-34 T 15-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 SUPERFAMILY SSF50249 363 444 2.39E-20 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 SUPERFAMILY SSF50249 255 371 3.43E-30 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.0E-98 T 15-10-2018 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.0E-98 T 15-10-2018 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.0E-98 T 15-10-2018 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.0E-98 T 15-10-2018 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.0E-98 T 15-10-2018 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.0E-98 T 15-10-2018 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.0E-98 T 15-10-2018 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.0E-98 T 15-10-2018 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.0E-98 T 15-10-2018 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 SMART SM00316 275 347 6.5E-26 T 15-10-2018 IPR022967 RNA-binding domain, S1 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 SMART SM00316 362 434 5.2E-21 T 15-10-2018 IPR022967 RNA-binding domain, S1 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 SMART SM00316 449 520 3.3E-20 T 15-10-2018 IPR022967 RNA-binding domain, S1 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 SMART SM00316 103 171 4.1E-9 T 15-10-2018 IPR022967 RNA-binding domain, S1 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 SMART SM00316 19 87 4.6E-5 T 15-10-2018 IPR022967 RNA-binding domain, S1 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 SMART SM00316 190 260 2.8E-28 T 15-10-2018 IPR022967 RNA-binding domain, S1 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 Pfam PF00575 S1 RNA binding domain 449 520 6.7E-15 T 15-10-2018 IPR003029 S1 domain GO:0003676 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 Pfam PF00575 S1 RNA binding domain 279 347 2.8E-19 T 15-10-2018 IPR003029 S1 domain GO:0003676 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 Pfam PF00575 S1 RNA binding domain 19 86 3.6E-7 T 15-10-2018 IPR003029 S1 domain GO:0003676 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 Pfam PF00575 S1 RNA binding domain 361 434 1.8E-21 T 15-10-2018 IPR003029 S1 domain GO:0003676 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 15-10-2018 IPR003029 S1 domain GO:0003676 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 Pfam PF00575 S1 RNA binding domain 103 171 3.8E-10 T 15-10-2018 IPR003029 S1 domain GO:0003676 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 SUPERFAMILY SSF50249 189 275 7.46E-27 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 Gene3D G3DSA:2.40.50.140 98 181 2.7E-7 T 15-10-2018 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 Gene3D G3DSA:2.40.50.140 269 357 3.8E-30 T 15-10-2018 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 Gene3D G3DSA:2.40.50.140 358 444 3.0E-23 T 15-10-2018 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 Gene3D G3DSA:2.40.50.140 187 268 1.1E-27 T 15-10-2018 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 Gene3D G3DSA:2.40.50.140 445 528 8.1E-21 T 15-10-2018 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 SUPERFAMILY SSF50249 2 112 4.83E-18 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 SUPERFAMILY SSF50249 429 538 1.86E-22 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 SUPERFAMILY SSF50249 103 185 1.14E-14 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 Gene3D G3DSA:2.40.50.140 6 97 9.1E-17 T 15-10-2018 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 PIRSF PIRSF002111 1 534 1.3E-218 T 15-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 XDD1_1574 7a47efe9de6602fd8c3e2a3d92ff6e80 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.0E-236 T 15-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 SUPERFAMILY SSF82693 650 838 4.97E-22 T 15-10-2018 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 Gene3D G3DSA:3.30.70.1320 134 325 7.7E-284 T 15-10-2018 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 SUPERFAMILY SSF82866 297 488 2.35E-47 T 15-10-2018 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 Gene3D G3DSA:3.30.70.1430 555 647 7.7E-284 T 15-10-2018 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 3.1E-265 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 SUPERFAMILY SSF82714 699 788 2.75E-15 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 SUPERFAMILY SSF82866 825 1009 3.01E-42 T 15-10-2018 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 SUPERFAMILY SSF82693 43 129 2.44E-22 T 15-10-2018 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 SUPERFAMILY SSF82693 138 323 1.96E-19 T 15-10-2018 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 Gene3D G3DSA:1.20.1640.10 10 500 7.7E-284 T 15-10-2018 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 Gene3D G3DSA:3.30.70.1440 648 847 7.7E-284 T 15-10-2018 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 SUPERFAMILY SSF82693 553 650 7.85E-17 T 15-10-2018 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 Gene3D G3DSA:3.30.2090.10 178 268 7.7E-284 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 Gene3D G3DSA:3.30.70.1430 40 799 7.7E-284 T 15-10-2018 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 SUPERFAMILY SSF82714 183 264 3.53E-16 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 Gene3D G3DSA:3.30.2090.10 698 791 7.7E-284 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 Gene3D G3DSA:1.20.1640.10 501 1005 7.7E-284 T 15-10-2018 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 3.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 3.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 3.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 3.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 3.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 3.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 3.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_3545 6157f9b3488bc4f112cec0f9281da77a 1026 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XDD1_2916 93fcb1d255784d44bcec50ef8ff1e470 236 Gene3D G3DSA:2.60.220.40 114 186 7.1E-32 T 15-10-2018 XDD1_2916 93fcb1d255784d44bcec50ef8ff1e470 236 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 33 234 3.9E-66 T 15-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 XDD1_2916 93fcb1d255784d44bcec50ef8ff1e470 236 Pfam PF04717 Type VI secretion system, phage-baseplate injector 32 142 1.9E-47 T 15-10-2018 IPR006531 Gp5 N-terminal XDD1_2916 93fcb1d255784d44bcec50ef8ff1e470 236 Gene3D G3DSA:2.40.50.230 26 112 1.0E-33 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XDD1_2612 ccd582243fa085b18ed863f79aee1e1c 516 Gene3D G3DSA:3.40.50.1390 9 169 7.9E-30 T 15-10-2018 XDD1_2612 ccd582243fa085b18ed863f79aee1e1c 516 SUPERFAMILY SSF53041 12 165 7.19E-21 T 15-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 XDD1_2612 ccd582243fa085b18ed863f79aee1e1c 516 Pfam PF07508 Recombinase 210 311 9.0E-20 T 15-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 XDD1_2612 ccd582243fa085b18ed863f79aee1e1c 516 SMART SM00857 13 165 7.2E-30 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 XDD1_2612 ccd582243fa085b18ed863f79aee1e1c 516 Pfam PF00239 Resolvase, N terminal domain 14 163 2.5E-20 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 XDD1_2612 ccd582243fa085b18ed863f79aee1e1c 516 Gene3D G3DSA:1.10.10.2600 173 315 8.3E-10 T 15-10-2018 IPR038109 DNA-binding recombinase domain superfamily XDD1_0949 c9199d5256aba595486c8017b09ebd98 878 SUPERFAMILY SSF49265 720 810 8.15E-5 T 15-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 XDD1_0949 c9199d5256aba595486c8017b09ebd98 878 Gene3D G3DSA:2.60.40.10 722 818 1.1E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_0949 c9199d5256aba595486c8017b09ebd98 878 Gene3D G3DSA:2.60.40.10 626 714 9.0E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_0949 c9199d5256aba595486c8017b09ebd98 878 SUPERFAMILY SSF49265 641 706 1.15E-5 T 15-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 XDD1_0949 c9199d5256aba595486c8017b09ebd98 878 Pfam PF13550 Putative phage tail protein 340 501 7.5E-18 T 15-10-2018 IPR032876 Tip attachment protein J XDD1_0737 ecc8c8105b0ad9ace43d9d4ace42e1e9 245 SUPERFAMILY SSF49354 16 133 9.94E-38 T 15-10-2018 IPR008962 PapD-like superfamily XDD1_0737 ecc8c8105b0ad9ace43d9d4ace42e1e9 245 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 159 220 4.3E-18 T 15-10-2018 IPR016148 Pili assembly chaperone, C-terminal XDD1_0737 ecc8c8105b0ad9ace43d9d4ace42e1e9 245 Gene3D G3DSA:2.60.40.10 139 232 1.7E-23 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_0737 ecc8c8105b0ad9ace43d9d4ace42e1e9 245 SUPERFAMILY SSF49584 142 230 2.49E-24 T 15-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily XDD1_0737 ecc8c8105b0ad9ace43d9d4ace42e1e9 245 PRINTS PR00969 Pili chaperone signature 115 130 9.4E-35 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XDD1_0737 ecc8c8105b0ad9ace43d9d4ace42e1e9 245 PRINTS PR00969 Pili chaperone signature 154 169 9.4E-35 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XDD1_0737 ecc8c8105b0ad9ace43d9d4ace42e1e9 245 PRINTS PR00969 Pili chaperone signature 92 109 9.4E-35 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XDD1_0737 ecc8c8105b0ad9ace43d9d4ace42e1e9 245 PRINTS PR00969 Pili chaperone signature 62 83 9.4E-35 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XDD1_0737 ecc8c8105b0ad9ace43d9d4ace42e1e9 245 PRINTS PR00969 Pili chaperone signature 16 25 9.4E-35 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XDD1_0737 ecc8c8105b0ad9ace43d9d4ace42e1e9 245 Gene3D G3DSA:2.60.40.10 15 133 4.1E-40 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_0737 ecc8c8105b0ad9ace43d9d4ace42e1e9 245 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 91 108 - T 15-10-2018 IPR018046 Pili assembly chaperone, conserved site XDD1_0737 ecc8c8105b0ad9ace43d9d4ace42e1e9 245 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 16 133 6.7E-37 T 15-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 XDD1_3221 faca27d30568ec304ecb426bc4edc1b4 212 SMART SM00953 34 177 2.0E-5 T 15-10-2018 IPR014914 RES domain XDD1_3221 faca27d30568ec304ecb426bc4edc1b4 212 Pfam PF08808 RES domain 21 172 6.5E-20 T 15-10-2018 IPR014914 RES domain XDD1_1607 fc78b8207e69852eb21209c8d7fb0edb 374 Gene3D G3DSA:3.30.1330.60 236 364 2.3E-39 T 15-10-2018 IPR036737 OmpA-like domain superfamily XDD1_1607 fc78b8207e69852eb21209c8d7fb0edb 374 Pfam PF01389 OmpA-like transmembrane domain 23 216 2.5E-68 T 15-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 XDD1_1607 fc78b8207e69852eb21209c8d7fb0edb 374 PRINTS PR01022 Outer membrane protein A signature 339 352 3.6E-22 T 15-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 XDD1_1607 fc78b8207e69852eb21209c8d7fb0edb 374 PRINTS PR01022 Outer membrane protein A signature 305 324 3.6E-22 T 15-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 XDD1_1607 fc78b8207e69852eb21209c8d7fb0edb 374 PRINTS PR01022 Outer membrane protein A signature 114 130 3.6E-22 T 15-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 XDD1_1607 fc78b8207e69852eb21209c8d7fb0edb 374 SUPERFAMILY SSF103088 237 360 1.96E-31 T 15-10-2018 IPR036737 OmpA-like domain superfamily XDD1_1607 fc78b8207e69852eb21209c8d7fb0edb 374 Gene3D G3DSA:2.40.160.20 10 235 9.9E-83 T 15-10-2018 XDD1_1607 fc78b8207e69852eb21209c8d7fb0edb 374 PRINTS PR01021 OMPA domain signature 281 296 2.4E-21 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XDD1_1607 fc78b8207e69852eb21209c8d7fb0edb 374 PRINTS PR01021 OMPA domain signature 249 271 2.4E-21 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XDD1_1607 fc78b8207e69852eb21209c8d7fb0edb 374 PRINTS PR01021 OMPA domain signature 296 312 2.4E-21 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XDD1_1607 fc78b8207e69852eb21209c8d7fb0edb 374 ProSitePatterns PS01068 OmpA-like domain. 283 327 - T 15-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 XDD1_1607 fc78b8207e69852eb21209c8d7fb0edb 374 SUPERFAMILY SSF56925 22 216 4.97E-39 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel XDD1_1607 fc78b8207e69852eb21209c8d7fb0edb 374 Pfam PF00691 OmpA family 248 338 7.3E-22 T 15-10-2018 IPR006665 OmpA-like domain XDD1_2188 6ba403629d3161881509336e97790f8a 207 Gene3D G3DSA:3.30.70.20 85 183 2.4E-22 T 15-10-2018 XDD1_2188 6ba403629d3161881509336e97790f8a 207 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 169 25.745 T 15-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 XDD1_2188 6ba403629d3161881509336e97790f8a 207 Pfam PF14697 4Fe-4S dicluster domain 110 164 6.2E-18 T 15-10-2018 XDD1_2188 6ba403629d3161881509336e97790f8a 207 SUPERFAMILY SSF54862 37 176 3.07E-30 T 15-10-2018 XDD1_2188 6ba403629d3161881509336e97790f8a 207 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 187 1.3E-85 T 15-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 XDD1_2188 6ba403629d3161881509336e97790f8a 207 Pfam PF04060 Putative Fe-S cluster 44 76 9.0E-12 T 15-10-2018 IPR007202 4Fe-4S domain GO:0051536 XDD1_2188 6ba403629d3161881509336e97790f8a 207 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XDD1_2188 6ba403629d3161881509336e97790f8a 207 Gene3D G3DSA:1.10.15.40 38 84 4.9E-7 T 15-10-2018 XDD1_2188 6ba403629d3161881509336e97790f8a 207 PIRSF PIRSF005784 3 191 2.9E-85 T 15-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 XDD1_2432 77c3b1359058989a68510b55aafde014 510 Gene3D G3DSA:3.30.420.150 119 297 3.8E-96 T 15-10-2018 XDD1_2432 77c3b1359058989a68510b55aafde014 510 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 15 308 5.5E-97 T 15-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 XDD1_2432 77c3b1359058989a68510b55aafde014 510 Gene3D G3DSA:3.30.420.40 16 305 3.8E-96 T 15-10-2018 XDD1_2432 77c3b1359058989a68510b55aafde014 510 Gene3D G3DSA:3.30.70.2260 459 510 9.6E-24 T 15-10-2018 XDD1_2432 77c3b1359058989a68510b55aafde014 510 SUPERFAMILY SSF53067 15 135 7.38E-35 T 15-10-2018 XDD1_2432 77c3b1359058989a68510b55aafde014 510 Pfam PF02541 Ppx/GppA phosphatase family 28 310 1.3E-94 T 15-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 XDD1_2432 77c3b1359058989a68510b55aafde014 510 PIRSF PIRSF001267 5 508 2.1E-199 T 15-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 XDD1_2432 77c3b1359058989a68510b55aafde014 510 SUPERFAMILY SSF53067 139 312 1.88E-47 T 15-10-2018 XDD1_2432 77c3b1359058989a68510b55aafde014 510 SUPERFAMILY SSF109604 315 508 3.34E-55 T 15-10-2018 XDD1_2432 77c3b1359058989a68510b55aafde014 510 Gene3D G3DSA:1.10.3210.10 313 458 1.9E-51 T 15-10-2018 XDD1_1709 d7c511129f1045eae013276b89e94b6a 380 Gene3D G3DSA:3.20.20.70 2 380 7.2E-127 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_1709 d7c511129f1045eae013276b89e94b6a 380 PIRSF PIRSF000138 2 379 3.9E-125 T 15-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 XDD1_1709 d7c511129f1045eae013276b89e94b6a 380 Pfam PF01070 FMN-dependent dehydrogenase 13 375 4.8E-129 T 15-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 XDD1_1709 d7c511129f1045eae013276b89e94b6a 380 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 15-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 XDD1_1709 d7c511129f1045eae013276b89e94b6a 380 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 73.766 T 15-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 XDD1_1709 d7c511129f1045eae013276b89e94b6a 380 SUPERFAMILY SSF51395 7 375 1.1E-100 T 15-10-2018 XDD1_0081 a473310c2d7e5428017d75c2baa9cc50 539 PIRSF PIRSF006294 3 539 2.6E-230 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 XDD1_0081 a473310c2d7e5428017d75c2baa9cc50 539 Gene3D G3DSA:3.40.449.10 22 233 2.4E-237 T 15-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 XDD1_0081 a473310c2d7e5428017d75c2baa9cc50 539 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 539 1.9E-281 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 XDD1_0081 a473310c2d7e5428017d75c2baa9cc50 539 SUPERFAMILY SSF53795 228 539 9.16E-130 T 15-10-2018 XDD1_0081 a473310c2d7e5428017d75c2baa9cc50 539 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 15 537 55.786 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 XDD1_0081 a473310c2d7e5428017d75c2baa9cc50 539 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 490 4.0E-211 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 XDD1_0081 a473310c2d7e5428017d75c2baa9cc50 539 Gene3D G3DSA:2.170.8.10 46 349 2.4E-237 T 15-10-2018 XDD1_0081 a473310c2d7e5428017d75c2baa9cc50 539 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 15-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 XDD1_0081 a473310c2d7e5428017d75c2baa9cc50 539 SUPERFAMILY SSF68923 8 226 1.24E-89 T 15-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 XDD1_0081 a473310c2d7e5428017d75c2baa9cc50 539 Gene3D G3DSA:3.90.228.20 234 524 2.4E-237 T 15-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 XDD1_3201 37e8c456b0db702bd65995710e518af7 176 Pfam PF09335 SNARE associated Golgi protein 41 164 4.7E-16 T 15-10-2018 IPR032816 SNARE associated Golgi protein XDD1_1220 42180ed450fbbbb2aea0b5c822826107 244 Gene3D G3DSA:1.25.40.10 31 244 4.5E-59 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_1220 42180ed450fbbbb2aea0b5c822826107 244 SUPERFAMILY SSF48452 35 120 3.04E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_1220 42180ed450fbbbb2aea0b5c822826107 244 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 5 243 37.98 T 15-10-2018 IPR017689 Outer membrane protein assembly factor BamD XDD1_1220 42180ed450fbbbb2aea0b5c822826107 244 Pfam PF13525 Outer membrane lipoprotein 29 238 1.9E-81 T 15-10-2018 IPR039565 Outer membrane lipoprotein BamD-like XDD1_1220 42180ed450fbbbb2aea0b5c822826107 244 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 6 242 2.3E-86 T 15-10-2018 IPR017689 Outer membrane protein assembly factor BamD XDD1_0148 8049822d6e58ed81b7e4592e32f0f26d 341 SUPERFAMILY SSF50129 1 173 2.89E-55 T 15-10-2018 IPR011032 GroES-like superfamily XDD1_0148 8049822d6e58ed81b7e4592e32f0f26d 341 SMART SM00829 12 338 4.2E-6 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XDD1_0148 8049822d6e58ed81b7e4592e32f0f26d 341 SUPERFAMILY SSF51735 141 305 1.1E-37 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0148 8049822d6e58ed81b7e4592e32f0f26d 341 Gene3D G3DSA:3.90.180.10 21 328 2.7E-121 T 15-10-2018 XDD1_0148 8049822d6e58ed81b7e4592e32f0f26d 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 3.1E-27 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XDD1_0148 8049822d6e58ed81b7e4592e32f0f26d 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 61.303 T 15-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 XDD1_0148 8049822d6e58ed81b7e4592e32f0f26d 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 1.0E-183 T 15-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 XDD1_0148 8049822d6e58ed81b7e4592e32f0f26d 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 XDD1_0148 8049822d6e58ed81b7e4592e32f0f26d 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 4.1E-33 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XDD1_0148 8049822d6e58ed81b7e4592e32f0f26d 341 Gene3D G3DSA:3.40.50.720 153 286 2.7E-121 T 15-10-2018 XDD1_0585 09882711a5999b43d89078ba66bc9077 327 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 39 54 - T 15-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 XDD1_0585 09882711a5999b43d89078ba66bc9077 327 Gene3D G3DSA:3.60.110.10 3 294 2.0E-95 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XDD1_0585 09882711a5999b43d89078ba66bc9077 327 Pfam PF00795 Carbon-nitrogen hydrolase 8 287 5.3E-41 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 XDD1_0585 09882711a5999b43d89078ba66bc9077 327 SUPERFAMILY SSF56317 5 310 4.06E-66 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XDD1_0337 9c5e61cfaa6559b845c6ecd9aee8368d 293 Gene3D G3DSA:3.40.190.10 82 180 6.9E-17 T 15-10-2018 XDD1_0337 9c5e61cfaa6559b845c6ecd9aee8368d 293 Pfam PF03466 LysR substrate binding domain 89 293 1.1E-35 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_0337 9c5e61cfaa6559b845c6ecd9aee8368d 293 Gene3D G3DSA:1.10.10.10 1 81 2.8E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0337 9c5e61cfaa6559b845c6ecd9aee8368d 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.0E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0337 9c5e61cfaa6559b845c6ecd9aee8368d 293 SUPERFAMILY SSF53850 89 293 2.5E-30 T 15-10-2018 XDD1_0337 9c5e61cfaa6559b845c6ecd9aee8368d 293 Gene3D G3DSA:3.40.190.10 181 261 1.7E-9 T 15-10-2018 XDD1_0337 9c5e61cfaa6559b845c6ecd9aee8368d 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0337 9c5e61cfaa6559b845c6ecd9aee8368d 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0337 9c5e61cfaa6559b845c6ecd9aee8368d 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0337 9c5e61cfaa6559b845c6ecd9aee8368d 293 SUPERFAMILY SSF46785 1 111 4.58E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3271 0dabb3cebbd38845620811013250a63f 531 SUPERFAMILY SSF51645 12 530 2.49E-186 T 15-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 XDD1_3271 0dabb3cebbd38845620811013250a63f 531 Gene3D G3DSA:3.20.20.360 1 409 1.3E-191 T 15-10-2018 XDD1_3271 0dabb3cebbd38845620811013250a63f 531 Pfam PF01274 Malate synthase 11 530 1.8E-203 T 15-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 XDD1_3271 0dabb3cebbd38845620811013250a63f 531 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 22 530 9.9E-248 T 15-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 XDD1_3271 0dabb3cebbd38845620811013250a63f 531 PIRSF PIRSF001363 1 531 9.8E-249 T 15-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 XDD1_3271 0dabb3cebbd38845620811013250a63f 531 Gene3D G3DSA:1.20.1220.12 410 531 7.9E-50 T 15-10-2018 XDD1_0329 942d4ab0b43f70753e3ac92859e1065d 548 Gene3D G3DSA:3.40.50.1220 180 341 1.6E-52 T 15-10-2018 XDD1_0329 942d4ab0b43f70753e3ac92859e1065d 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 6.7E-216 T 15-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 XDD1_0329 942d4ab0b43f70753e3ac92859e1065d 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 189 321 2.9E-42 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 XDD1_0329 942d4ab0b43f70753e3ac92859e1065d 548 Gene3D G3DSA:3.40.50.970 1 171 3.1E-71 T 15-10-2018 XDD1_0329 942d4ab0b43f70753e3ac92859e1065d 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 7.0E-51 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 XDD1_0329 942d4ab0b43f70753e3ac92859e1065d 548 Gene3D G3DSA:3.40.50.970 347 547 1.3E-65 T 15-10-2018 XDD1_0329 942d4ab0b43f70753e3ac92859e1065d 548 SUPERFAMILY SSF52518 1 177 4.67E-64 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_0329 942d4ab0b43f70753e3ac92859e1065d 548 SUPERFAMILY SSF52467 181 342 4.36E-58 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily XDD1_0329 942d4ab0b43f70753e3ac92859e1065d 548 SUPERFAMILY SSF52518 357 544 2.14E-65 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_0329 942d4ab0b43f70753e3ac92859e1065d 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 165 1.8E-58 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 XDD1_0329 942d4ab0b43f70753e3ac92859e1065d 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 15-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 XDD1_3601 2993dd068c55f974d4afeed88c2a1565 221 Gene3D G3DSA:1.20.120.530 75 219 9.9E-27 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal XDD1_3601 2993dd068c55f974d4afeed88c2a1565 221 SUPERFAMILY SSF46785 3 76 3.7E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3601 2993dd068c55f974d4afeed88c2a1565 221 SUPERFAMILY SSF48008 79 212 1.12E-24 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal XDD1_3601 2993dd068c55f974d4afeed88c2a1565 221 SMART SM00345 14 72 3.1E-16 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_3601 2993dd068c55f974d4afeed88c2a1565 221 SMART SM00895 82 204 6.3E-12 T 15-10-2018 IPR011711 GntR, C-terminal XDD1_3601 2993dd068c55f974d4afeed88c2a1565 221 Gene3D G3DSA:1.10.10.10 1 73 2.5E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3601 2993dd068c55f974d4afeed88c2a1565 221 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 3.0E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_3601 2993dd068c55f974d4afeed88c2a1565 221 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 3.0E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_3601 2993dd068c55f974d4afeed88c2a1565 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 1.6E-16 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_3601 2993dd068c55f974d4afeed88c2a1565 221 Pfam PF07729 FCD domain 82 203 2.2E-15 T 15-10-2018 IPR011711 GntR, C-terminal XDD1_3389 09dc9bf46f4bebb9e0503c371d98e1de 271 SUPERFAMILY SSF53335 17 265 1.91E-77 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_3389 09dc9bf46f4bebb9e0503c371d98e1de 271 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 55.245 T 15-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 XDD1_3389 09dc9bf46f4bebb9e0503c371d98e1de 271 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 15-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 XDD1_3389 09dc9bf46f4bebb9e0503c371d98e1de 271 SMART SM00650 25 198 2.8E-80 T 15-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 XDD1_3389 09dc9bf46f4bebb9e0503c371d98e1de 271 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 265 2.0E-82 T 15-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm XDD1_3389 09dc9bf46f4bebb9e0503c371d98e1de 271 Gene3D G3DSA:1.10.8.100 201 267 2.6E-28 T 15-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 XDD1_3389 09dc9bf46f4bebb9e0503c371d98e1de 271 Gene3D G3DSA:3.40.50.150 1 200 2.1E-67 T 15-10-2018 XDD1_3389 09dc9bf46f4bebb9e0503c371d98e1de 271 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 264 3.5E-90 T 15-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 XDD1_0770 942962bc26c3b9bdb13dbfeb5ceda468 1132 ProSitePatterns PS00455 Putative AMP-binding domain signature. 676 687 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_0770 942962bc26c3b9bdb13dbfeb5ceda468 1132 Pfam PF00501 AMP-binding enzyme 534 932 6.2E-86 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_0770 942962bc26c3b9bdb13dbfeb5ceda468 1132 Gene3D G3DSA:3.40.50.12780 524 925 1.9E-110 T 15-10-2018 XDD1_0770 942962bc26c3b9bdb13dbfeb5ceda468 1132 SUPERFAMILY SSF52777 65 261 1.89E-15 T 15-10-2018 XDD1_0770 942962bc26c3b9bdb13dbfeb5ceda468 1132 SUPERFAMILY SSF47336 1043 1122 6.33E-10 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_0770 942962bc26c3b9bdb13dbfeb5ceda468 1132 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 553 956 1.7E-117 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_0770 942962bc26c3b9bdb13dbfeb5ceda468 1132 SUPERFAMILY SSF52777 251 495 1.22E-30 T 15-10-2018 XDD1_0770 942962bc26c3b9bdb13dbfeb5ceda468 1132 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1074 1089 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_0770 942962bc26c3b9bdb13dbfeb5ceda468 1132 Pfam PF13193 AMP-binding enzyme C-terminal domain 941 1022 1.8E-8 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_0770 942962bc26c3b9bdb13dbfeb5ceda468 1132 Gene3D G3DSA:3.30.300.30 927 1039 7.7E-32 T 15-10-2018 XDD1_0770 942962bc26c3b9bdb13dbfeb5ceda468 1132 Gene3D G3DSA:3.30.559.10 62 242 8.9E-39 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_0770 942962bc26c3b9bdb13dbfeb5ceda468 1132 Pfam PF00668 Condensation domain 101 491 1.7E-30 T 15-10-2018 IPR001242 Condensation domain XDD1_0770 942962bc26c3b9bdb13dbfeb5ceda468 1132 Pfam PF00550 Phosphopantetheine attachment site 1052 1096 2.8E-8 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_0770 942962bc26c3b9bdb13dbfeb5ceda468 1132 Gene3D G3DSA:3.30.559.30 249 501 1.5E-61 T 15-10-2018 XDD1_0770 942962bc26c3b9bdb13dbfeb5ceda468 1132 Gene3D G3DSA:1.10.1200.10 1040 1125 1.5E-13 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_0770 942962bc26c3b9bdb13dbfeb5ceda468 1132 SUPERFAMILY SSF56801 516 1061 3.14E-133 T 15-10-2018 XDD1_2051 25fac251ee1d1e77a753d8f08bfdada8 347 Pfam PF13384 Homeodomain-like domain 28 72 2.6E-9 T 15-10-2018 XDD1_2051 25fac251ee1d1e77a753d8f08bfdada8 347 SUPERFAMILY SSF46689 25 140 1.27E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2051 25fac251ee1d1e77a753d8f08bfdada8 347 Gene3D G3DSA:3.30.420.470 145 336 4.1E-13 T 15-10-2018 XDD1_2051 25fac251ee1d1e77a753d8f08bfdada8 347 Pfam PF13358 DDE superfamily endonuclease 177 310 4.9E-30 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2051 25fac251ee1d1e77a753d8f08bfdada8 347 SUPERFAMILY SSF53098 207 310 9.1E-8 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_1715 25fac251ee1d1e77a753d8f08bfdada8 347 Pfam PF13384 Homeodomain-like domain 28 72 2.6E-9 T 15-10-2018 XDD1_1715 25fac251ee1d1e77a753d8f08bfdada8 347 SUPERFAMILY SSF46689 25 140 1.27E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1715 25fac251ee1d1e77a753d8f08bfdada8 347 Gene3D G3DSA:3.30.420.470 145 336 4.1E-13 T 15-10-2018 XDD1_1715 25fac251ee1d1e77a753d8f08bfdada8 347 Pfam PF13358 DDE superfamily endonuclease 177 310 4.9E-30 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_1715 25fac251ee1d1e77a753d8f08bfdada8 347 SUPERFAMILY SSF53098 207 310 9.1E-8 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3337 25fac251ee1d1e77a753d8f08bfdada8 347 Pfam PF13384 Homeodomain-like domain 28 72 2.6E-9 T 15-10-2018 XDD1_3337 25fac251ee1d1e77a753d8f08bfdada8 347 SUPERFAMILY SSF46689 25 140 1.27E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3337 25fac251ee1d1e77a753d8f08bfdada8 347 Gene3D G3DSA:3.30.420.470 145 336 4.1E-13 T 15-10-2018 XDD1_3337 25fac251ee1d1e77a753d8f08bfdada8 347 Pfam PF13358 DDE superfamily endonuclease 177 310 4.9E-30 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_3337 25fac251ee1d1e77a753d8f08bfdada8 347 SUPERFAMILY SSF53098 207 310 9.1E-8 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0280 cd4fc7791500224540f2128b08a14290 210 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 15-10-2018 IPR019926 Ribosomal protein L3, conserved site XDD1_0280 cd4fc7791500224540f2128b08a14290 210 Pfam PF00297 Ribosomal protein L3 27 183 1.6E-17 T 15-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0280 cd4fc7791500224540f2128b08a14290 210 Gene3D G3DSA:2.40.30.10 129 210 6.6E-19 T 15-10-2018 XDD1_0280 cd4fc7791500224540f2128b08a14290 210 SUPERFAMILY SSF50447 1 209 4.68E-82 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XDD1_0280 cd4fc7791500224540f2128b08a14290 210 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 208 41.143 T 15-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0280 cd4fc7791500224540f2128b08a14290 210 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 205 3.7E-93 T 15-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0280 cd4fc7791500224540f2128b08a14290 210 Gene3D G3DSA:2.40.50.620 31 97 5.3E-17 T 15-10-2018 XDD1_2973 91dfb2df039dfe0ffc29f1b475d38c51 130 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 40.132 T 15-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 XDD1_2973 91dfb2df039dfe0ffc29f1b475d38c51 130 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 129 8.2E-54 T 15-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 XDD1_2973 91dfb2df039dfe0ffc29f1b475d38c51 130 Pfam PF01597 Glycine cleavage H-protein 8 128 5.9E-47 T 15-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate XDD1_2973 91dfb2df039dfe0ffc29f1b475d38c51 130 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 XDD1_2973 91dfb2df039dfe0ffc29f1b475d38c51 130 Gene3D G3DSA:2.40.50.100 2 129 5.7E-52 T 15-10-2018 XDD1_2973 91dfb2df039dfe0ffc29f1b475d38c51 130 SUPERFAMILY SSF51230 4 128 8.25E-45 T 15-10-2018 IPR011053 Single hybrid motif XDD1_3159 0dc138bda44f25e1a6e873868b7157af 356 SUPERFAMILY SSF51261 114 353 9.42E-53 T 15-10-2018 IPR011055 Duplicated hybrid motif XDD1_3159 0dc138bda44f25e1a6e873868b7157af 356 Gene3D G3DSA:2.70.70.10 196 356 2.3E-37 T 15-10-2018 IPR011055 Duplicated hybrid motif XDD1_3159 0dc138bda44f25e1a6e873868b7157af 356 SMART SM00257 114 158 1.3E-9 T 15-10-2018 IPR018392 LysM domain XDD1_3159 0dc138bda44f25e1a6e873868b7157af 356 Pfam PF01476 LysM domain 115 157 1.6E-9 T 15-10-2018 IPR018392 LysM domain XDD1_3159 0dc138bda44f25e1a6e873868b7157af 356 Pfam PF01551 Peptidase family M23 256 349 2.6E-31 T 15-10-2018 IPR016047 Peptidase M23 XDD1_3159 0dc138bda44f25e1a6e873868b7157af 356 Gene3D G3DSA:3.10.350.10 108 170 5.0E-11 T 15-10-2018 IPR036779 LysM domain superfamily XDD1_2944 efe4769d98e9a1bcff5ca35944e6e732 560 Pfam PF01764 Lipase (class 3) 219 359 1.1E-19 T 15-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 XDD1_2944 efe4769d98e9a1bcff5ca35944e6e732 560 SUPERFAMILY SSF53474 185 360 7.65E-26 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2944 efe4769d98e9a1bcff5ca35944e6e732 560 Gene3D G3DSA:3.40.50.1820 186 381 1.9E-33 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_0987 b5b5ec71a241398a8eecc979aa0c5bcf 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 8.1E-47 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XDD1_0987 b5b5ec71a241398a8eecc979aa0c5bcf 664 SMART SM00861 355 525 3.5E-68 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XDD1_0987 b5b5ec71a241398a8eecc979aa0c5bcf 664 Gene3D G3DSA:3.40.50.970 327 537 3.6E-84 T 15-10-2018 XDD1_0987 b5b5ec71a241398a8eecc979aa0c5bcf 664 SUPERFAMILY SSF52922 533 664 5.89E-45 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XDD1_0987 b5b5ec71a241398a8eecc979aa0c5bcf 664 SUPERFAMILY SSF52518 6 329 1.02E-119 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_0987 b5b5ec71a241398a8eecc979aa0c5bcf 664 Gene3D G3DSA:3.40.50.970 2 326 5.4E-134 T 15-10-2018 XDD1_0987 b5b5ec71a241398a8eecc979aa0c5bcf 664 Pfam PF02780 Transketolase, C-terminal domain 549 655 1.1E-19 T 15-10-2018 IPR033248 Transketolase, C-terminal domain XDD1_0987 b5b5ec71a241398a8eecc979aa0c5bcf 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 15-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XDD1_0987 b5b5ec71a241398a8eecc979aa0c5bcf 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 663 0.0 T 15-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 XDD1_0987 b5b5ec71a241398a8eecc979aa0c5bcf 664 Gene3D G3DSA:3.40.50.920 538 664 9.1E-45 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XDD1_0987 b5b5ec71a241398a8eecc979aa0c5bcf 664 SUPERFAMILY SSF52518 331 525 1.59E-68 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_0987 b5b5ec71a241398a8eecc979aa0c5bcf 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XDD1_0987 b5b5ec71a241398a8eecc979aa0c5bcf 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 9.4E-169 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XDD1_0818 a6460b4ccf570b876ecb09d0f4cc2004 148 Gene3D G3DSA:2.40.128.480 41 148 1.4E-14 T 15-10-2018 IPR038625 Rhodococcus equi virulence-associated superfamiliy XDD1_0818 a6460b4ccf570b876ecb09d0f4cc2004 148 Pfam PF05526 Rhodococcus equi virulence-associated protein 43 147 1.1E-7 T 15-10-2018 IPR008810 Rhodococcus equi virulence-associated protein XDD1_0832 850c9481ef3b67713e0ddb0c1458114a 366 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 354 47.096 T 15-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 XDD1_0832 850c9481ef3b67713e0ddb0c1458114a 366 Pfam PF02547 Queuosine biosynthesis protein 4 353 7.5E-132 T 15-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 XDD1_0832 850c9481ef3b67713e0ddb0c1458114a 366 Gene3D G3DSA:3.40.1780.10 14 353 3.0E-116 T 15-10-2018 XDD1_0832 850c9481ef3b67713e0ddb0c1458114a 366 SUPERFAMILY SSF111337 1 353 1.57E-135 T 15-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 XDD1_0832 850c9481ef3b67713e0ddb0c1458114a 366 Gene3D G3DSA:2.40.10.240 64 173 3.0E-116 T 15-10-2018 XDD1_0832 850c9481ef3b67713e0ddb0c1458114a 366 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 354 2.6E-159 T 15-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 XDD1_2128 101fe40f78c15e20b08c763e917e6b8a 345 Gene3D G3DSA:3.30.420.470 144 338 1.2E-11 T 15-10-2018 XDD1_2128 101fe40f78c15e20b08c763e917e6b8a 345 SUPERFAMILY SSF53098 218 318 1.05E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_2128 101fe40f78c15e20b08c763e917e6b8a 345 Pfam PF13592 Winged helix-turn helix 96 150 5.2E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_2128 101fe40f78c15e20b08c763e917e6b8a 345 Pfam PF13358 DDE superfamily endonuclease 165 309 2.9E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2128 101fe40f78c15e20b08c763e917e6b8a 345 Pfam PF13551 Winged helix-turn helix 28 84 1.8E-8 T 15-10-2018 XDD1_2128 101fe40f78c15e20b08c763e917e6b8a 345 SUPERFAMILY SSF46689 13 127 2.96E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2576 b3ad9fc65eab84d51e9f7fae7b8e52e1 209 Pfam PF13689 Domain of unknown function (DUF4154) 69 206 6.3E-27 T 15-10-2018 IPR025293 YfiR-like XDD1_1274 828f8bc5a7ac0ea32ef07b8f9ef69bc5 235 Gene3D G3DSA:3.40.50.620 24 234 9.6E-67 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_1274 828f8bc5a7ac0ea32ef07b8f9ef69bc5 235 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 27 89 7.9E-13 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XDD1_1274 828f8bc5a7ac0ea32ef07b8f9ef69bc5 235 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 24 234 31.876 T 15-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 XDD1_1274 828f8bc5a7ac0ea32ef07b8f9ef69bc5 235 SUPERFAMILY SSF52374 27 234 7.17E-59 T 15-10-2018 XDD1_1274 828f8bc5a7ac0ea32ef07b8f9ef69bc5 235 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 28 233 4.1E-61 T 15-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 XDD1_1274 828f8bc5a7ac0ea32ef07b8f9ef69bc5 235 Pfam PF01467 Cytidylyltransferase-like 28 208 5.5E-38 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XDD1_3039 43bad34ba00a3b894233d30cd5da850e 388 Gene3D G3DSA:3.90.1150.10 253 388 9.7E-58 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_3039 43bad34ba00a3b894233d30cd5da850e 388 Gene3D G3DSA:3.40.640.10 7 252 6.5E-92 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_3039 43bad34ba00a3b894233d30cd5da850e 388 SUPERFAMILY SSF53383 20 386 1.77E-118 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_3039 43bad34ba00a3b894233d30cd5da850e 388 PIRSF PIRSF001434 1 388 9.7E-146 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XDD1_3039 43bad34ba00a3b894233d30cd5da850e 388 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 385 1.3E-152 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XDD1_3039 43bad34ba00a3b894233d30cd5da850e 388 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 193 207 - T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XDD1_2029 9a28fe30736db47efecf389ac58c2940 311 Pfam PF00069 Protein kinase domain 82 255 5.3E-23 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 XDD1_2029 9a28fe30736db47efecf389ac58c2940 311 SUPERFAMILY SSF56112 22 304 8.75E-44 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily XDD1_2029 9a28fe30736db47efecf389ac58c2940 311 Gene3D G3DSA:3.30.200.20 24 136 1.5E-11 T 15-10-2018 XDD1_2029 9a28fe30736db47efecf389ac58c2940 311 Gene3D G3DSA:1.10.510.10 137 307 4.4E-25 T 15-10-2018 XDD1_2029 9a28fe30736db47efecf389ac58c2940 311 SMART SM00220 28 309 6.1E-13 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 XDD1_2029 9a28fe30736db47efecf389ac58c2940 311 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 172 184 - T 15-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 XDD1_2977 134506d07448a59548f1287e0ace1a88 438 Gene3D G3DSA:3.40.350.10 1 171 2.8E-60 T 15-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal XDD1_2977 134506d07448a59548f1287e0ace1a88 438 SUPERFAMILY SSF53092 2 174 1.46E-50 T 15-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal XDD1_2977 134506d07448a59548f1287e0ace1a88 438 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 125 1.4E-33 T 15-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 XDD1_2977 134506d07448a59548f1287e0ace1a88 438 SMART SM01011 1 136 4.3E-54 T 15-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 XDD1_2977 134506d07448a59548f1287e0ace1a88 438 Gene3D G3DSA:3.90.230.10 172 437 1.4E-104 T 15-10-2018 XDD1_2977 134506d07448a59548f1287e0ace1a88 438 PRINTS PR00599 Methionine aminopeptidase-1 signature 370 382 6.1E-5 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XDD1_2977 134506d07448a59548f1287e0ace1a88 438 PRINTS PR00599 Methionine aminopeptidase-1 signature 253 269 6.1E-5 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XDD1_2977 134506d07448a59548f1287e0ace1a88 438 Pfam PF00557 Metallopeptidase family M24 181 411 2.1E-66 T 15-10-2018 IPR000994 Peptidase M24 XDD1_2977 134506d07448a59548f1287e0ace1a88 438 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 348 360 - T 15-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site XDD1_2977 134506d07448a59548f1287e0ace1a88 438 SUPERFAMILY SSF55920 175 434 8.9E-89 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like XDD1_3138 982c5267cdbc3b8ce27a89f0c70368d8 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 1.2E-199 T 15-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XDD1_3138 982c5267cdbc3b8ce27a89f0c70368d8 384 SUPERFAMILY SSF55973 112 232 3.1E-51 T 15-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XDD1_3138 982c5267cdbc3b8ce27a89f0c70368d8 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.822 T 15-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XDD1_3138 982c5267cdbc3b8ce27a89f0c70368d8 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 8.4E-70 T 15-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XDD1_3138 982c5267cdbc3b8ce27a89f0c70368d8 384 SUPERFAMILY SSF55973 3 109 5.49E-48 T 15-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XDD1_3138 982c5267cdbc3b8ce27a89f0c70368d8 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 15-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XDD1_3138 982c5267cdbc3b8ce27a89f0c70368d8 384 PIRSF PIRSF000497 1 382 4.9E-175 T 15-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XDD1_3138 982c5267cdbc3b8ce27a89f0c70368d8 384 SUPERFAMILY SSF55973 233 382 9.03E-72 T 15-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XDD1_3138 982c5267cdbc3b8ce27a89f0c70368d8 384 Gene3D G3DSA:3.30.300.10 5 233 7.5E-181 T 15-10-2018 XDD1_3138 982c5267cdbc3b8ce27a89f0c70368d8 384 Gene3D G3DSA:3.30.300.10 11 270 7.5E-181 T 15-10-2018 XDD1_3138 982c5267cdbc3b8ce27a89f0c70368d8 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 1.4E-43 T 15-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XDD1_3138 982c5267cdbc3b8ce27a89f0c70368d8 384 Gene3D G3DSA:3.30.300.10 103 372 7.5E-181 T 15-10-2018 XDD1_3138 982c5267cdbc3b8ce27a89f0c70368d8 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 15-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XDD1_3138 982c5267cdbc3b8ce27a89f0c70368d8 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 3.8E-45 T 15-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XDD1_1448 f58f44ea351185d8761d36dab2317ab6 193 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 33.449 T 15-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 XDD1_1448 f58f44ea351185d8761d36dab2317ab6 193 Gene3D G3DSA:2.70.40.10 1 193 9.8E-51 T 15-10-2018 IPR036157 dUTPase-like superfamily XDD1_1448 f58f44ea351185d8761d36dab2317ab6 193 Pfam PF00692 dUTPase 79 184 1.8E-9 T 15-10-2018 IPR029054 dUTPase-like XDD1_1448 f58f44ea351185d8761d36dab2317ab6 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 2.7E-66 T 15-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 XDD1_1448 f58f44ea351185d8761d36dab2317ab6 193 SUPERFAMILY SSF51283 1 192 3.79E-59 T 15-10-2018 IPR036157 dUTPase-like superfamily XDD1_0525 07d5b0ab1c3875d6fc7f08bafa42f363 94 SUPERFAMILY SSF88723 2 90 4.77E-23 T 15-10-2018 IPR029060 PIN-like domain superfamily XDD1_0525 07d5b0ab1c3875d6fc7f08bafa42f363 94 Pfam PF01850 PIN domain 8 83 7.7E-7 T 15-10-2018 IPR002716 PIN domain XDD1_0525 07d5b0ab1c3875d6fc7f08bafa42f363 94 Gene3D G3DSA:3.40.50.1010 1 90 8.5E-25 T 15-10-2018 XDD1_3215 2645ae27845d5fc57d082a3b4d777b06 318 Gene3D G3DSA:3.40.190.10 90 286 5.1E-72 T 15-10-2018 XDD1_3215 2645ae27845d5fc57d082a3b4d777b06 318 SUPERFAMILY SSF46785 1 109 3.23E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3215 2645ae27845d5fc57d082a3b4d777b06 318 Gene3D G3DSA:1.10.10.10 1 89 3.6E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3215 2645ae27845d5fc57d082a3b4d777b06 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.3E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_3215 2645ae27845d5fc57d082a3b4d777b06 318 Pfam PF03466 LysR substrate binding domain 87 288 8.3E-43 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_3215 2645ae27845d5fc57d082a3b4d777b06 318 SUPERFAMILY SSF53850 88 289 5.27E-40 T 15-10-2018 XDD1_3215 2645ae27845d5fc57d082a3b4d777b06 318 Gene3D G3DSA:3.40.190.10 160 263 5.1E-72 T 15-10-2018 XDD1_3215 2645ae27845d5fc57d082a3b4d777b06 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.6E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_3215 2645ae27845d5fc57d082a3b4d777b06 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.6E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_3215 2645ae27845d5fc57d082a3b4d777b06 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.6E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0606 693899c1f3f5092618c82a01962998e1 351 Pfam PF00356 Bacterial regulatory proteins, lacI family 28 72 3.4E-17 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_0606 693899c1f3f5092618c82a01962998e1 351 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 84 339 1.3E-31 T 15-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain XDD1_0606 693899c1f3f5092618c82a01962998e1 351 Gene3D G3DSA:3.40.50.2300 181 312 5.3E-65 T 15-10-2018 XDD1_0606 693899c1f3f5092618c82a01962998e1 351 Gene3D G3DSA:1.10.260.40 18 82 1.7E-15 T 15-10-2018 XDD1_0606 693899c1f3f5092618c82a01962998e1 351 Gene3D G3DSA:3.40.50.2300 87 328 5.3E-65 T 15-10-2018 XDD1_0606 693899c1f3f5092618c82a01962998e1 351 SUPERFAMILY SSF53822 83 337 3.73E-59 T 15-10-2018 IPR028082 Periplasmic binding protein-like I XDD1_0606 693899c1f3f5092618c82a01962998e1 351 ProSitePatterns PS00356 LacI-type HTH domain signature. 28 46 - T 15-10-2018 XDD1_0606 693899c1f3f5092618c82a01962998e1 351 SUPERFAMILY SSF47413 24 83 2.45E-13 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_0606 693899c1f3f5092618c82a01962998e1 351 SMART SM00354 25 95 4.3E-26 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_0751 722a3c987cac6866d81fbecdccda7149 156 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 141 2.6E-11 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain XDD1_0751 722a3c987cac6866d81fbecdccda7149 156 Gene3D G3DSA:2.40.10.330 73 129 2.0E-36 T 15-10-2018 XDD1_0751 722a3c987cac6866d81fbecdccda7149 156 Gene3D G3DSA:3.10.50.40 14 142 2.0E-36 T 15-10-2018 XDD1_0751 722a3c987cac6866d81fbecdccda7149 156 SUPERFAMILY SSF54534 4 143 3.34E-33 T 15-10-2018 XDD1_3100 966cc3e646b21b643839e0e724e45690 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_3100 966cc3e646b21b643839e0e724e45690 308 Pfam PF00005 ABC transporter 21 165 5.8E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_3100 966cc3e646b21b643839e0e724e45690 308 SMART SM00382 30 213 2.3E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3100 966cc3e646b21b643839e0e724e45690 308 SUPERFAMILY SSF52540 3 233 1.2E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3100 966cc3e646b21b643839e0e724e45690 308 Gene3D G3DSA:3.40.50.300 1 234 6.8E-63 T 15-10-2018 XDD1_0195 4535e1da54fe5dd207bb0d2e8e36499c 443 SMART SM01086 335 434 3.3E-22 T 15-10-2018 IPR019489 Clp ATPase, C-terminal XDD1_0195 4535e1da54fe5dd207bb0d2e8e36499c 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.391 T 15-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 XDD1_0195 4535e1da54fe5dd207bb0d2e8e36499c 443 SUPERFAMILY SSF52540 3 441 1.96E-95 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0195 4535e1da54fe5dd207bb0d2e8e36499c 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 135 4.3E-7 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_0195 4535e1da54fe5dd207bb0d2e8e36499c 443 Gene3D G3DSA:1.10.8.60 335 440 2.8E-41 T 15-10-2018 XDD1_0195 4535e1da54fe5dd207bb0d2e8e36499c 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 9.8E-232 T 15-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 XDD1_0195 4535e1da54fe5dd207bb0d2e8e36499c 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 184 329 2.4E-42 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_0195 4535e1da54fe5dd207bb0d2e8e36499c 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 5.9E-7 T 15-10-2018 IPR019489 Clp ATPase, C-terminal XDD1_0195 4535e1da54fe5dd207bb0d2e8e36499c 443 SMART SM00382 49 332 1.2E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3761 b35c5c8328035f07a07267447ad05866 350 Pfam PF06996 Type VI secretion, TssG 26 336 1.1E-89 T 15-10-2018 IPR010732 Type VI secretion, TssG-like XDD1_3761 b35c5c8328035f07a07267447ad05866 350 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 26 336 1.8E-96 T 15-10-2018 IPR010732 Type VI secretion, TssG-like XDD1_3504 19db3ebaf9c0e127763e1b8ef418a46b 1485 Gene3D G3DSA:3.60.20.10 12 544 0.0 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XDD1_3504 19db3ebaf9c0e127763e1b8ef418a46b 1485 Pfam PF01493 GXGXG motif 1235 1418 1.5E-76 T 15-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 XDD1_3504 19db3ebaf9c0e127763e1b8ef418a46b 1485 Gene3D G3DSA:3.20.20.70 482 1169 0.0 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_3504 19db3ebaf9c0e127763e1b8ef418a46b 1485 Pfam PF00310 Glutamine amidotransferases class-II 12 424 6.6E-176 T 15-10-2018 IPR017932 Glutamine amidotransferase type 2 domain XDD1_3504 19db3ebaf9c0e127763e1b8ef418a46b 1485 SUPERFAMILY SSF51395 437 1190 1.97E-250 T 15-10-2018 XDD1_3504 19db3ebaf9c0e127763e1b8ef418a46b 1485 Gene3D G3DSA:3.20.20.70 429 791 0.0 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_3504 19db3ebaf9c0e127763e1b8ef418a46b 1485 SUPERFAMILY SSF56235 12 428 1.31E-149 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XDD1_3504 19db3ebaf9c0e127763e1b8ef418a46b 1485 Pfam PF04898 Glutamate synthase central domain 457 736 1.5E-103 T 15-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 XDD1_3504 19db3ebaf9c0e127763e1b8ef418a46b 1485 SUPERFAMILY SSF69336 1211 1464 1.96E-89 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 XDD1_3504 19db3ebaf9c0e127763e1b8ef418a46b 1485 Pfam PF01645 Conserved region in glutamate synthase 792 1155 1.4E-153 T 15-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 XDD1_3504 19db3ebaf9c0e127763e1b8ef418a46b 1485 Gene3D G3DSA:2.160.20.60 1194 1467 4.9E-102 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 XDD1_2745 76e893be87a9966ee68252f4a5c15b68 808 SMART SM00778 50 89 8.3E-12 T 15-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 XDD1_2745 76e893be87a9966ee68252f4a5c15b68 808 Gene3D G3DSA:1.10.10.10 703 801 1.5E-38 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2745 76e893be87a9966ee68252f4a5c15b68 808 Pfam PF13362 Toprim domain 217 323 1.7E-11 T 15-10-2018 IPR006171 TOPRIM domain XDD1_2745 76e893be87a9966ee68252f4a5c15b68 808 Pfam PF03288 Poxvirus D5 protein-like 703 798 3.5E-18 T 15-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal XDD1_2745 76e893be87a9966ee68252f4a5c15b68 808 SUPERFAMILY SSF52540 513 670 3.98E-10 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2745 76e893be87a9966ee68252f4a5c15b68 808 Gene3D G3DSA:3.40.50.300 491 666 3.4E-7 T 15-10-2018 XDD1_2745 76e893be87a9966ee68252f4a5c15b68 808 SUPERFAMILY SSF57783 49 119 1.53E-8 T 15-10-2018 XDD1_2745 76e893be87a9966ee68252f4a5c15b68 808 Pfam PF08706 D5 N terminal like 370 497 8.6E-9 T 15-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XDD1_2745 76e893be87a9966ee68252f4a5c15b68 808 SMART SM00885 369 495 2.0E-12 T 15-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XDD1_2745 76e893be87a9966ee68252f4a5c15b68 808 SUPERFAMILY SSF46785 704 801 3.26E-37 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_2745 76e893be87a9966ee68252f4a5c15b68 808 Pfam PF08273 Zinc-binding domain of primase-helicase 50 89 3.7E-11 T 15-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 XDD1_2745 76e893be87a9966ee68252f4a5c15b68 808 Gene3D G3DSA:3.40.1360.10 208 333 5.9E-5 T 15-10-2018 XDD1_2543 260c834b1b70c31fe67b2268d36c4b42 579 PIRSF PIRSF004950 403 579 6.5E-54 T 15-10-2018 IPR012159 Inner membrane protein YejM XDD1_2543 260c834b1b70c31fe67b2268d36c4b42 579 PIRSF PIRSF004950 6 411 1.1E-149 T 15-10-2018 IPR012159 Inner membrane protein YejM XDD1_2543 260c834b1b70c31fe67b2268d36c4b42 579 Pfam PF00884 Sulfatase 412 493 2.3E-11 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 XDD1_2543 260c834b1b70c31fe67b2268d36c4b42 579 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 3.1E-104 T 15-10-2018 IPR024588 Inner membrane protein YejM, N-terminal XDD1_2543 260c834b1b70c31fe67b2268d36c4b42 579 SUPERFAMILY SSF53649 256 553 1.79E-39 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 XDD1_2543 260c834b1b70c31fe67b2268d36c4b42 579 Gene3D G3DSA:3.40.720.10 410 556 1.1E-16 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 XDD1_2543 260c834b1b70c31fe67b2268d36c4b42 579 Gene3D G3DSA:3.40.720.10 249 401 1.4E-10 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 XDD1_1056 a56bbb844f60f7e3c86eed56c00a18ff 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 4.6E-8 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_1056 a56bbb844f60f7e3c86eed56c00a18ff 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 200 214 4.6E-8 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_1056 a56bbb844f60f7e3c86eed56c00a18ff 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 4.6E-8 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_1056 a56bbb844f60f7e3c86eed56c00a18ff 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 4.6E-8 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_1056 a56bbb844f60f7e3c86eed56c00a18ff 267 Pfam PF00561 alpha/beta hydrolase fold 21 125 1.1E-16 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_1056 a56bbb844f60f7e3c86eed56c00a18ff 267 SUPERFAMILY SSF53474 4 254 2.34E-49 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1056 a56bbb844f60f7e3c86eed56c00a18ff 267 Gene3D G3DSA:3.40.50.1820 1 255 6.0E-50 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1694 3cfe644d225869d19403e47d686494ae 553 Pfam PF03354 Phage Terminase 71 532 7.6E-91 T 15-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type XDD1_1694 3cfe644d225869d19403e47d686494ae 553 Gene3D G3DSA:3.40.50.300 22 251 7.6E-23 T 15-10-2018 XDD1_0261 87b1409f636410af7db07f454d720da3 224 SUPERFAMILY SSF46689 7 81 1.04E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0261 87b1409f636410af7db07f454d720da3 224 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 5 213 53.569 T 15-10-2018 IPR023764 Transcriptional repressor HTH, FabR XDD1_0261 87b1409f636410af7db07f454d720da3 224 Gene3D G3DSA:1.10.357.10 57 214 2.3E-43 T 15-10-2018 XDD1_0261 87b1409f636410af7db07f454d720da3 224 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 62 3.8E-8 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_0261 87b1409f636410af7db07f454d720da3 224 Gene3D G3DSA:1.10.10.60 4 56 3.4E-23 T 15-10-2018 XDD1_2006 a3664465f0e6440cb5dcd10398b998b2 269 Pfam PF13369 Transglutaminase-like superfamily 33 183 1.0E-37 T 15-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 XDD1_2006 a3664465f0e6440cb5dcd10398b998b2 269 Pfam PF13371 Tetratricopeptide repeat 187 259 4.4E-24 T 15-10-2018 XDD1_2417 471cdc1e3dfaf88515b824fd49833303 183 PIRSF PIRSF028103 5 179 5.2E-56 T 15-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 XDD1_2417 471cdc1e3dfaf88515b824fd49833303 183 Gene3D G3DSA:3.30.70.260 4 86 1.5E-24 T 15-10-2018 XDD1_2417 471cdc1e3dfaf88515b824fd49833303 183 Pfam PF13740 ACT domain 7 82 2.9E-25 T 15-10-2018 XDD1_2417 471cdc1e3dfaf88515b824fd49833303 183 Gene3D G3DSA:3.30.70.260 92 182 1.1E-22 T 15-10-2018 XDD1_2417 471cdc1e3dfaf88515b824fd49833303 183 SUPERFAMILY SSF55021 92 175 1.95E-12 T 15-10-2018 XDD1_2417 471cdc1e3dfaf88515b824fd49833303 183 SUPERFAMILY SSF55021 6 84 2.82E-16 T 15-10-2018 XDD1_2185 d7ec2a4d28d6f5a98ba4448af4ded385 346 Gene3D G3DSA:3.40.50.720 6 316 1.8E-127 T 15-10-2018 XDD1_2185 d7ec2a4d28d6f5a98ba4448af4ded385 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 223 1.8E-12 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 XDD1_2185 d7ec2a4d28d6f5a98ba4448af4ded385 346 SUPERFAMILY SSF51735 4 198 1.01E-48 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2185 d7ec2a4d28d6f5a98ba4448af4ded385 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 1.5E-26 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 XDD1_2185 d7ec2a4d28d6f5a98ba4448af4ded385 346 Gene3D G3DSA:3.30.360.10 127 330 1.8E-127 T 15-10-2018 XDD1_2228 1d6a50640290d25ad737f632aab2bf9c 486 Pfam PF13091 PLD-like domain 327 443 4.2E-26 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 XDD1_2228 1d6a50640290d25ad737f632aab2bf9c 486 Pfam PF13091 PLD-like domain 134 247 3.4E-14 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 XDD1_2228 1d6a50640290d25ad737f632aab2bf9c 486 Gene3D G3DSA:3.30.870.10 317 456 1.9E-25 T 15-10-2018 XDD1_2228 1d6a50640290d25ad737f632aab2bf9c 486 PIRSF PIRSF000850 74 185 21.0 T 15-10-2018 XDD1_2228 1d6a50640290d25ad737f632aab2bf9c 486 PIRSF PIRSF000850 372 461 0.14 T 15-10-2018 XDD1_2228 1d6a50640290d25ad737f632aab2bf9c 486 PIRSF PIRSF000850 307 381 0.003 T 15-10-2018 XDD1_2228 1d6a50640290d25ad737f632aab2bf9c 486 SUPERFAMILY SSF56024 69 315 8.05E-48 T 15-10-2018 XDD1_2228 1d6a50640290d25ad737f632aab2bf9c 486 SUPERFAMILY SSF56024 273 473 3.36E-46 T 15-10-2018 XDD1_2228 1d6a50640290d25ad737f632aab2bf9c 486 Gene3D G3DSA:3.30.870.10 110 309 1.4E-38 T 15-10-2018 XDD1_2228 1d6a50640290d25ad737f632aab2bf9c 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 50.133 T 15-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 XDD1_2228 1d6a50640290d25ad737f632aab2bf9c 486 SMART SM00155 219 246 2.0E-4 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 XDD1_2228 1d6a50640290d25ad737f632aab2bf9c 486 SMART SM00155 399 426 4.2E-5 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 XDD1_2228 1d6a50640290d25ad737f632aab2bf9c 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 7 486 5.6E-187 T 15-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 XDD1_2228 1d6a50640290d25ad737f632aab2bf9c 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 24 59 3.5E-6 T 15-10-2018 IPR027379 Cardiolipin synthase N-terminal XDD1_3226 1a20d62be11b79ad902b0e914442e521 172 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 172 2.9E-62 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XDD1_3226 1a20d62be11b79ad902b0e914442e521 172 SUPERFAMILY SSF50249 4 172 3.32E-64 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_3226 1a20d62be11b79ad902b0e914442e521 172 Pfam PF00436 Single-strand binding protein family 6 111 8.0E-44 T 15-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XDD1_3226 1a20d62be11b79ad902b0e914442e521 172 Gene3D G3DSA:2.40.50.140 2 146 4.8E-52 T 15-10-2018 XDD1_3226 1a20d62be11b79ad902b0e914442e521 172 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 40.12 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XDD1_3226 1a20d62be11b79ad902b0e914442e521 172 PIRSF PIRSF002070 2 162 2.8E-39 T 15-10-2018 XDD1_2522 ec038431369bd4cc40a60994bba2011c 287 SUPERFAMILY SSF53850 89 286 3.8E-44 T 15-10-2018 XDD1_2522 ec038431369bd4cc40a60994bba2011c 287 Gene3D G3DSA:1.10.10.10 1 84 8.7E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2522 ec038431369bd4cc40a60994bba2011c 287 Gene3D G3DSA:3.40.190.10 89 283 2.3E-42 T 15-10-2018 XDD1_2522 ec038431369bd4cc40a60994bba2011c 287 Pfam PF03466 LysR substrate binding domain 89 286 1.0E-48 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_2522 ec038431369bd4cc40a60994bba2011c 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 9.7E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2522 ec038431369bd4cc40a60994bba2011c 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 9.7E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2522 ec038431369bd4cc40a60994bba2011c 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 9.7E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2522 ec038431369bd4cc40a60994bba2011c 287 Gene3D G3DSA:3.40.190.10 162 262 2.3E-42 T 15-10-2018 XDD1_2522 ec038431369bd4cc40a60994bba2011c 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.1E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2522 ec038431369bd4cc40a60994bba2011c 287 SUPERFAMILY SSF46785 1 109 1.41E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3202 b010ba64879a560be9da2fe46c3db486 260 Gene3D G3DSA:3.90.190.10 13 259 3.5E-54 T 15-10-2018 IPR029021 Protein-tyrosine phosphatase-like XDD1_3202 b010ba64879a560be9da2fe46c3db486 260 SUPERFAMILY SSF52799 12 259 7.25E-48 T 15-10-2018 IPR029021 Protein-tyrosine phosphatase-like XDD1_3202 b010ba64879a560be9da2fe46c3db486 260 Pfam PF13350 Tyrosine phosphatase family 13 260 3.3E-58 T 15-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type XDD1_2483 c7bc9eefb69ed7fc5c9949e8753bd184 414 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 XDD1_2483 c7bc9eefb69ed7fc5c9949e8753bd184 414 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 404 4.3E-150 T 15-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 XDD1_2483 c7bc9eefb69ed7fc5c9949e8753bd184 414 Pfam PF07687 Peptidase dimerisation domain 206 303 2.4E-11 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain XDD1_2483 c7bc9eefb69ed7fc5c9949e8753bd184 414 PIRSF PIRSF037215 1 408 1.6E-175 T 15-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 XDD1_2483 c7bc9eefb69ed7fc5c9949e8753bd184 414 Gene3D G3DSA:3.40.630.10 4 400 8.6E-174 T 15-10-2018 XDD1_2483 c7bc9eefb69ed7fc5c9949e8753bd184 414 Pfam PF01546 Peptidase family M20/M25/M40 139 401 3.9E-13 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 XDD1_2483 c7bc9eefb69ed7fc5c9949e8753bd184 414 Hamap MF_00550 Peptidase T [pepT]. 1 404 54.035 T 15-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 XDD1_2483 c7bc9eefb69ed7fc5c9949e8753bd184 414 SUPERFAMILY SSF55031 208 320 1.01E-41 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain XDD1_2483 c7bc9eefb69ed7fc5c9949e8753bd184 414 Gene3D G3DSA:3.30.70.360 208 319 8.6E-174 T 15-10-2018 XDD1_2483 c7bc9eefb69ed7fc5c9949e8753bd184 414 SUPERFAMILY SSF53187 1 402 1.79E-75 T 15-10-2018 XDD1_3863 a826cc376766d6289e6bd96b0eab9a7d 239 Gene3D G3DSA:1.10.10.10 130 239 5.4E-38 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3863 a826cc376766d6289e6bd96b0eab9a7d 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 232 1.1E-21 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XDD1_3863 a826cc376766d6289e6bd96b0eab9a7d 239 Gene3D G3DSA:3.40.50.2300 1 126 1.4E-40 T 15-10-2018 XDD1_3863 a826cc376766d6289e6bd96b0eab9a7d 239 SUPERFAMILY SSF46894 133 234 1.42E-26 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XDD1_3863 a826cc376766d6289e6bd96b0eab9a7d 239 SUPERFAMILY SSF52172 3 125 7.54E-42 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_3863 a826cc376766d6289e6bd96b0eab9a7d 239 SMART SM00448 5 116 3.2E-44 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_3863 a826cc376766d6289e6bd96b0eab9a7d 239 Pfam PF00072 Response regulator receiver domain 7 116 1.7E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_3863 a826cc376766d6289e6bd96b0eab9a7d 239 SMART SM00862 156 232 4.6E-23 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XDD1_0824 2bf483b1d4cf0a1ac153fbd1d3c5db59 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 1.3E-28 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XDD1_0824 2bf483b1d4cf0a1ac153fbd1d3c5db59 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 3.6E-112 T 15-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 XDD1_0824 2bf483b1d4cf0a1ac153fbd1d3c5db59 229 Gene3D G3DSA:3.40.50.2300 2 127 6.1E-39 T 15-10-2018 XDD1_0824 2bf483b1d4cf0a1ac153fbd1d3c5db59 229 SUPERFAMILY SSF52172 3 127 5.69E-43 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_0824 2bf483b1d4cf0a1ac153fbd1d3c5db59 229 SUPERFAMILY SSF46894 128 226 3.4E-31 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XDD1_0824 2bf483b1d4cf0a1ac153fbd1d3c5db59 229 SMART SM00448 3 116 7.5E-46 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_0824 2bf483b1d4cf0a1ac153fbd1d3c5db59 229 Gene3D G3DSA:1.10.10.10 128 229 2.6E-39 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0824 2bf483b1d4cf0a1ac153fbd1d3c5db59 229 SMART SM00862 150 225 1.7E-26 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XDD1_0824 2bf483b1d4cf0a1ac153fbd1d3c5db59 229 Pfam PF00072 Response regulator receiver domain 5 117 2.1E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_2877 ae40bca2246f1543d500bbacf3c0eee8 213 SMART SM01059 1 205 6.0E-105 T 15-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 XDD1_2877 ae40bca2246f1543d500bbacf3c0eee8 213 SUPERFAMILY SSF52777 2 210 5.56E-73 T 15-10-2018 XDD1_2877 ae40bca2246f1543d500bbacf3c0eee8 213 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 8 204 4.0E-77 T 15-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 XDD1_2877 ae40bca2246f1543d500bbacf3c0eee8 213 PIRSF PIRSF000440 1 213 8.2E-85 T 15-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 XDD1_2877 ae40bca2246f1543d500bbacf3c0eee8 213 Pfam PF00302 Chloramphenicol acetyltransferase 3 205 5.2E-89 T 15-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 XDD1_2877 ae40bca2246f1543d500bbacf3c0eee8 213 ProSitePatterns PS00100 Chloramphenicol acetyltransferase active site. 186 196 - T 15-10-2018 IPR018372 Chloramphenicol acetyltransferase, active site GO:0008811 XDD1_2877 ae40bca2246f1543d500bbacf3c0eee8 213 Gene3D G3DSA:3.30.559.10 1 212 4.5E-67 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_3270 70f7b862269652eefef732cec51070fa 435 PIRSF PIRSF001362 1 435 4.4E-225 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 XDD1_3270 70f7b862269652eefef732cec51070fa 435 SUPERFAMILY SSF51621 6 418 1.35E-154 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XDD1_3270 70f7b862269652eefef732cec51070fa 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 256 2.2E-119 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 XDD1_3270 70f7b862269652eefef732cec51070fa 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 257 435 1.2E-86 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 XDD1_3270 70f7b862269652eefef732cec51070fa 435 ProSitePatterns PS00161 Isocitrate lyase signature. 194 199 - T 15-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 XDD1_3270 70f7b862269652eefef732cec51070fa 435 Gene3D G3DSA:3.20.20.60 1 418 6.7E-186 T 15-10-2018 XDD1_3270 70f7b862269652eefef732cec51070fa 435 Pfam PF00463 Isocitrate lyase family 9 256 4.8E-65 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 XDD1_3270 70f7b862269652eefef732cec51070fa 435 Pfam PF00463 Isocitrate lyase family 257 434 1.5E-45 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 XDD1_0130 85756194eaacbec4b719e0c3c86040da 392 Gene3D G3DSA:3.40.50.2000 1 209 4.7E-13 T 15-10-2018 XDD1_0130 85756194eaacbec4b719e0c3c86040da 392 Gene3D G3DSA:3.40.50.2000 210 379 3.6E-30 T 15-10-2018 XDD1_0130 85756194eaacbec4b719e0c3c86040da 392 Pfam PF13439 Glycosyltransferase Family 4 25 189 3.2E-13 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XDD1_0130 85756194eaacbec4b719e0c3c86040da 392 Pfam PF13692 Glycosyl transferases group 1 211 353 4.9E-22 T 15-10-2018 XDD1_0130 85756194eaacbec4b719e0c3c86040da 392 SUPERFAMILY SSF53756 9 388 5.23E-48 T 15-10-2018 XDD1_0188 c339a8ff66be088798e2d64344b94d30 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 5.1E-18 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 XDD1_0188 c339a8ff66be088798e2d64344b94d30 248 Gene3D G3DSA:3.40.50.80 97 248 8.8E-40 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XDD1_0188 c339a8ff66be088798e2d64344b94d30 248 Pfam PF00970 Oxidoreductase FAD-binding domain 18 88 2.1E-8 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 XDD1_0188 c339a8ff66be088798e2d64344b94d30 248 SUPERFAMILY SSF52343 103 248 1.2E-37 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XDD1_0188 c339a8ff66be088798e2d64344b94d30 248 SUPERFAMILY SSF63380 3 99 8.78E-25 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XDD1_0188 c339a8ff66be088798e2d64344b94d30 248 Gene3D G3DSA:2.40.30.10 1 96 1.7E-31 T 15-10-2018 XDD1_3019 78707b1d92a7a6a28dc1cc22bbe438dd 397 Pfam PF01098 Cell cycle protein 30 384 5.9E-120 T 15-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_3019 78707b1d92a7a6a28dc1cc22bbe438dd 397 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 26 393 40.637 T 15-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_3019 78707b1d92a7a6a28dc1cc22bbe438dd 397 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 342 366 - T 15-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_3019 78707b1d92a7a6a28dc1cc22bbe438dd 397 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 28 383 1.9E-130 T 15-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_0528 34700f01dd1ad31ca01e92e9d7765a0e 140 Pfam PF06877 Regulator of ribonuclease activity B 12 113 7.1E-33 T 15-10-2018 IPR009671 Regulator of ribonuclease activity B domain XDD1_0528 34700f01dd1ad31ca01e92e9d7765a0e 140 SUPERFAMILY SSF89946 7 123 7.98E-39 T 15-10-2018 IPR036701 RraB-like superfamily XDD1_0528 34700f01dd1ad31ca01e92e9d7765a0e 140 PIRSF PIRSF018193 1 140 3.4E-64 T 15-10-2018 IPR016716 Regulator of ribonuclease activity B XDD1_0528 34700f01dd1ad31ca01e92e9d7765a0e 140 Gene3D G3DSA:3.30.70.970 1 125 1.1E-49 T 15-10-2018 IPR036701 RraB-like superfamily XDD1_0528 34700f01dd1ad31ca01e92e9d7765a0e 140 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 30.838 T 15-10-2018 IPR016716 Regulator of ribonuclease activity B XDD1_3822 5b2773a3674b1077cc0f00d198cbf0d4 233 Pfam PF00665 Integrase core domain 77 179 3.9E-13 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_3822 5b2773a3674b1077cc0f00d198cbf0d4 233 SUPERFAMILY SSF53098 75 225 6.37E-27 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3822 5b2773a3674b1077cc0f00d198cbf0d4 233 Gene3D G3DSA:3.30.420.10 68 230 1.1E-10 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_1384 2dae525190d065e910265c54d65b9974 674 TIGRFAM TIGR01056 topB: DNA topoisomerase III 7 668 1.3E-244 T 15-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 XDD1_1384 2dae525190d065e910265c54d65b9974 674 Pfam PF01131 DNA topoisomerase 156 597 3.7E-116 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_1384 2dae525190d065e910265c54d65b9974 674 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 626 657 9.7E-9 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 XDD1_1384 2dae525190d065e910265c54d65b9974 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 2.4E-26 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_1384 2dae525190d065e910265c54d65b9974 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 2.4E-26 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_1384 2dae525190d065e910265c54d65b9974 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 2.4E-26 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_1384 2dae525190d065e910265c54d65b9974 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 2.4E-26 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_1384 2dae525190d065e910265c54d65b9974 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 103 116 2.4E-26 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_1384 2dae525190d065e910265c54d65b9974 674 Pfam PF01751 Toprim domain 9 135 1.4E-19 T 15-10-2018 IPR006171 TOPRIM domain XDD1_1384 2dae525190d065e910265c54d65b9974 674 Gene3D G3DSA:1.10.290.10 287 416 1.9E-153 T 15-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 XDD1_1384 2dae525190d065e910265c54d65b9974 674 SMART SM00437 278 563 7.7E-68 T 15-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 XDD1_1384 2dae525190d065e910265c54d65b9974 674 Gene3D G3DSA:1.10.460.10 164 607 1.9E-153 T 15-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 XDD1_1384 2dae525190d065e910265c54d65b9974 674 SMART SM00436 129 224 2.9E-31 T 15-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 XDD1_1384 2dae525190d065e910265c54d65b9974 674 SUPERFAMILY SSF57783 623 657 2.38E-8 T 15-10-2018 XDD1_1384 2dae525190d065e910265c54d65b9974 674 Gene3D G3DSA:3.40.50.140 7 155 2.4E-50 T 15-10-2018 XDD1_1384 2dae525190d065e910265c54d65b9974 674 Gene3D G3DSA:2.70.20.10 218 493 1.9E-153 T 15-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 XDD1_1384 2dae525190d065e910265c54d65b9974 674 SMART SM00493 7 129 6.1E-22 T 15-10-2018 IPR006171 TOPRIM domain XDD1_1384 2dae525190d065e910265c54d65b9974 674 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 330 - T 15-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 XDD1_1384 2dae525190d065e910265c54d65b9974 674 SUPERFAMILY SSF56712 7 610 3.66E-180 T 15-10-2018 IPR023405 DNA topoisomerase, type IA, core domain XDD1_0183 5c5585ab5a5b2080aed309dc906d1c73 354 Pfam PF13531 Bacterial extracellular solute-binding protein 62 305 1.1E-43 T 15-10-2018 XDD1_0183 5c5585ab5a5b2080aed309dc906d1c73 354 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 170 178 - T 15-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 XDD1_0183 5c5585ab5a5b2080aed309dc906d1c73 354 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 39 351 3.1E-166 T 15-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 XDD1_0183 5c5585ab5a5b2080aed309dc906d1c73 354 Gene3D G3DSA:3.40.190.10 52 320 1.0E-134 T 15-10-2018 XDD1_0183 5c5585ab5a5b2080aed309dc906d1c73 354 SUPERFAMILY SSF53850 48 352 2.17E-87 T 15-10-2018 XDD1_0183 5c5585ab5a5b2080aed309dc906d1c73 354 Gene3D G3DSA:3.40.190.10 139 350 1.0E-134 T 15-10-2018 XDD1_1021 65da2cfe55bde0499f8832698aa899b8 495 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 36 483 6.2E-219 T 15-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 XDD1_1021 65da2cfe55bde0499f8832698aa899b8 495 Pfam PF00171 Aldehyde dehydrogenase family 25 484 1.3E-170 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 XDD1_1021 65da2cfe55bde0499f8832698aa899b8 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 XDD1_1021 65da2cfe55bde0499f8832698aa899b8 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 289 300 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 XDD1_1021 65da2cfe55bde0499f8832698aa899b8 495 Gene3D G3DSA:3.40.605.10 25 480 5.4E-183 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 XDD1_1021 65da2cfe55bde0499f8832698aa899b8 495 SUPERFAMILY SSF53720 9 488 1.96E-172 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XDD1_1021 65da2cfe55bde0499f8832698aa899b8 495 Gene3D G3DSA:3.40.309.10 268 457 5.4E-183 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 XDD1_3577 98d5114df184b95bdaba84736bf80798 221 SMART SM00382 27 213 2.4E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3577 98d5114df184b95bdaba84736bf80798 221 Gene3D G3DSA:3.40.50.300 1 220 4.4E-63 T 15-10-2018 XDD1_3577 98d5114df184b95bdaba84736bf80798 221 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_3577 98d5114df184b95bdaba84736bf80798 221 Pfam PF00005 ABC transporter 18 165 6.1E-37 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_3577 98d5114df184b95bdaba84736bf80798 221 SUPERFAMILY SSF52540 1 216 6.1E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3577 98d5114df184b95bdaba84736bf80798 221 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 7.5E-94 T 15-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 ProSitePatterns PS00012 Phosphopantetheine attachment site. 445 460 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 Pfam PF00501 AMP-binding enzyme 1 316 7.6E-68 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 Pfam PF00501 AMP-binding enzyme 961 1362 7.6E-103 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 Gene3D G3DSA:1.10.1200.10 1458 1536 9.6E-26 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 Gene3D G3DSA:1.10.1200.10 412 490 3.4E-27 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 Pfam PF00668 Condensation domain 1550 1957 8.4E-58 T 15-10-2018 IPR001242 Condensation domain XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 Pfam PF00668 Condensation domain 499 941 2.9E-95 T 15-10-2018 IPR001242 Condensation domain XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 SUPERFAMILY SSF56801 1 434 1.26E-119 T 15-10-2018 XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 SUPERFAMILY SSF47336 413 485 5.5E-20 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 SUPERFAMILY SSF52777 503 674 2.56E-38 T 15-10-2018 XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 Pfam PF00550 Phosphopantetheine attachment site 423 485 2.4E-15 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 Pfam PF00550 Phosphopantetheine attachment site 1469 1531 5.8E-13 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 Gene3D G3DSA:3.30.559.10 1537 1711 1.5E-38 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1 340 1.1E-101 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 982 1386 1.2E-132 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 SUPERFAMILY SSF52777 682 948 1.93E-56 T 15-10-2018 XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 Gene3D G3DSA:3.30.559.30 1712 1958 1.7E-42 T 15-10-2018 XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 Gene3D G3DSA:3.40.50.12780 1 310 4.5E-92 T 15-10-2018 XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1491 1506 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 SUPERFAMILY SSF52777 1724 1954 3.56E-23 T 15-10-2018 XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 Gene3D G3DSA:3.30.559.10 502 870 3.6E-126 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 ProSitePatterns PS00455 Putative AMP-binding domain signature. 62 73 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 SUPERFAMILY SSF47336 1459 1531 1.96E-20 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 Gene3D G3DSA:3.30.559.30 678 925 3.6E-126 T 15-10-2018 XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 SMART SM00823 Phosphopantetheine attachment site 1467 1535 2.8E-5 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 SMART SM00823 Phosphopantetheine attachment site 421 490 0.0035 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 SUPERFAMILY SSF56801 919 1480 7.2E-164 T 15-10-2018 XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 Gene3D G3DSA:3.30.300.30 1356 1457 6.6E-33 T 15-10-2018 XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1108 1119 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 SUPERFAMILY SSF52777 1547 1739 7.23E-32 T 15-10-2018 XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 Pfam PF13193 AMP-binding enzyme C-terminal domain 1370 1442 7.8E-11 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 Pfam PF13193 AMP-binding enzyme C-terminal domain 324 396 4.3E-13 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 Gene3D G3DSA:3.30.300.30 311 411 5.0E-32 T 15-10-2018 XDD1_1907 f74d4c9cf76b065323d79cb85691cccc 2006 Gene3D G3DSA:3.40.50.12780 951 1354 3.5E-133 T 15-10-2018 XDD1_3514 43b026fe9834a23e25baa44c9e6508fb 352 Gene3D G3DSA:2.40.10.10 31 139 7.4E-29 T 15-10-2018 XDD1_3514 43b026fe9834a23e25baa44c9e6508fb 352 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 349 8.4E-150 T 15-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 XDD1_3514 43b026fe9834a23e25baa44c9e6508fb 352 PRINTS PR00834 HtrA/DegQ protease family signature 88 100 3.8E-48 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XDD1_3514 43b026fe9834a23e25baa44c9e6508fb 352 PRINTS PR00834 HtrA/DegQ protease family signature 184 201 3.8E-48 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XDD1_3514 43b026fe9834a23e25baa44c9e6508fb 352 PRINTS PR00834 HtrA/DegQ protease family signature 206 223 3.8E-48 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XDD1_3514 43b026fe9834a23e25baa44c9e6508fb 352 PRINTS PR00834 HtrA/DegQ protease family signature 149 173 3.8E-48 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XDD1_3514 43b026fe9834a23e25baa44c9e6508fb 352 PRINTS PR00834 HtrA/DegQ protease family signature 109 129 3.8E-48 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XDD1_3514 43b026fe9834a23e25baa44c9e6508fb 352 PRINTS PR00834 HtrA/DegQ protease family signature 295 307 3.8E-48 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XDD1_3514 43b026fe9834a23e25baa44c9e6508fb 352 SMART SM00228 255 337 1.0E-11 T 15-10-2018 IPR001478 PDZ domain GO:0005515 XDD1_3514 43b026fe9834a23e25baa44c9e6508fb 352 SUPERFAMILY SSF50156 238 345 8.41E-22 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 XDD1_3514 43b026fe9834a23e25baa44c9e6508fb 352 SUPERFAMILY SSF50494 44 252 6.54E-61 T 15-10-2018 IPR009003 Peptidase S1, PA clan XDD1_3514 43b026fe9834a23e25baa44c9e6508fb 352 Pfam PF13180 PDZ domain 256 345 2.8E-15 T 15-10-2018 IPR001478 PDZ domain GO:0005515 XDD1_3514 43b026fe9834a23e25baa44c9e6508fb 352 Pfam PF13365 Trypsin-like peptidase domain 79 213 2.0E-29 T 15-10-2018 XDD1_3514 43b026fe9834a23e25baa44c9e6508fb 352 Gene3D G3DSA:2.40.10.10 140 254 4.4E-38 T 15-10-2018 XDD1_3514 43b026fe9834a23e25baa44c9e6508fb 352 Gene3D G3DSA:2.30.42.10 255 350 1.4E-21 T 15-10-2018 XDD1_1204 845418499bd50d9a60627925bc4a6197 426 Pfam PF03471 Transporter associated domain 344 418 3.9E-19 T 15-10-2018 IPR005170 Transporter-associated domain XDD1_1204 845418499bd50d9a60627925bc4a6197 426 Gene3D G3DSA:3.30.465.10 339 419 6.9E-27 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 XDD1_1204 845418499bd50d9a60627925bc4a6197 426 SMART SM01091 342 420 8.9E-25 T 15-10-2018 IPR005170 Transporter-associated domain XDD1_1204 845418499bd50d9a60627925bc4a6197 426 Gene3D G3DSA:3.10.580.10 201 330 4.4E-40 T 15-10-2018 XDD1_1204 845418499bd50d9a60627925bc4a6197 426 SUPERFAMILY SSF54631 192 329 3.54E-22 T 15-10-2018 XDD1_1204 845418499bd50d9a60627925bc4a6197 426 Pfam PF01595 Domain of unknown function DUF21 11 184 2.1E-49 T 15-10-2018 IPR002550 CNNM, transmembrane domain XDD1_1204 845418499bd50d9a60627925bc4a6197 426 SUPERFAMILY SSF56176 340 424 1.12E-22 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XDD1_1679 36d21149117600cfaf6a0fd7511271b4 72 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 11 59 1.1E-18 T 15-10-2018 IPR010260 DNA-binding transcriptional activator AlpA XDD1_1679 36d21149117600cfaf6a0fd7511271b4 72 Gene3D G3DSA:1.10.238.160 10 68 2.2E-6 T 15-10-2018 XDD1_2401 e7a0f449e217a23f456fc2b100c4aae0 730 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 515 539 7.3E-50 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XDD1_2401 e7a0f449e217a23f456fc2b100c4aae0 730 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 631 646 7.3E-50 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XDD1_2401 e7a0f449e217a23f456fc2b100c4aae0 730 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 543 562 7.3E-50 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XDD1_2401 e7a0f449e217a23f456fc2b100c4aae0 730 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 573 593 7.3E-50 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XDD1_2401 e7a0f449e217a23f456fc2b100c4aae0 730 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 649 671 7.3E-50 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XDD1_2401 e7a0f449e217a23f456fc2b100c4aae0 730 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 489 507 7.3E-50 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XDD1_2401 e7a0f449e217a23f456fc2b100c4aae0 730 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 55 447 8.1E-88 T 15-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 XDD1_2401 e7a0f449e217a23f456fc2b100c4aae0 730 SUPERFAMILY SSF50993 53 451 7.32E-78 T 15-10-2018 XDD1_2401 e7a0f449e217a23f456fc2b100c4aae0 730 Pfam PF00326 Prolyl oligopeptidase family 504 716 3.2E-65 T 15-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 XDD1_2401 e7a0f449e217a23f456fc2b100c4aae0 730 SUPERFAMILY SSF53474 459 698 3.35E-43 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2401 e7a0f449e217a23f456fc2b100c4aae0 730 Gene3D G3DSA:2.130.10.120 118 448 9.1E-246 T 15-10-2018 XDD1_2401 e7a0f449e217a23f456fc2b100c4aae0 730 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 550 580 - T 15-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 XDD1_2401 e7a0f449e217a23f456fc2b100c4aae0 730 Gene3D G3DSA:3.40.50.1820 67 716 9.1E-246 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_0675 054162013bfd509ad17a83244d463089 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 8.6E-10 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_0675 054162013bfd509ad17a83244d463089 204 SUPERFAMILY SSF46689 2 74 7.18E-14 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0675 054162013bfd509ad17a83244d463089 204 Gene3D G3DSA:1.10.10.60 1 69 4.6E-27 T 15-10-2018 XDD1_0675 054162013bfd509ad17a83244d463089 204 Gene3D G3DSA:1.10.357.10 79 199 4.9E-21 T 15-10-2018 XDD1_0675 054162013bfd509ad17a83244d463089 204 SUPERFAMILY SSF48498 84 197 1.02E-20 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily XDD1_0204 99e22338e1ddc2ad5f097abe86e70e2b 897 SUPERFAMILY SSF51621 25 897 0.0 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XDD1_0204 99e22338e1ddc2ad5f097abe86e70e2b 897 Gene3D G3DSA:1.20.1440.90 291 407 4.7E-26 T 15-10-2018 XDD1_0204 99e22338e1ddc2ad5f097abe86e70e2b 897 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 555 567 - T 15-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 XDD1_0204 99e22338e1ddc2ad5f097abe86e70e2b 897 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 553 573 1.4E-69 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 XDD1_0204 99e22338e1ddc2ad5f097abe86e70e2b 897 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 727 753 1.4E-69 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 XDD1_0204 99e22338e1ddc2ad5f097abe86e70e2b 897 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 151 164 1.4E-69 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 XDD1_0204 99e22338e1ddc2ad5f097abe86e70e2b 897 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 204 220 1.4E-69 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 XDD1_0204 99e22338e1ddc2ad5f097abe86e70e2b 897 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 404 424 1.4E-69 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 XDD1_0204 99e22338e1ddc2ad5f097abe86e70e2b 897 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 595 624 1.4E-69 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 XDD1_0204 99e22338e1ddc2ad5f097abe86e70e2b 897 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 263 278 1.4E-69 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 XDD1_0204 99e22338e1ddc2ad5f097abe86e70e2b 897 Pfam PF00311 Phosphoenolpyruvate carboxylase 147 897 1.2E-292 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 XDD1_0204 99e22338e1ddc2ad5f097abe86e70e2b 897 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 152 163 - T 15-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 XDD1_0204 99e22338e1ddc2ad5f097abe86e70e2b 897 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 20 897 18.228 T 15-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 XDD1_2906 8deae42bfdc9c43477b8a49cac53b404 172 Pfam PF04985 Phage tail tube protein FII 4 170 2.9E-66 T 15-10-2018 IPR006498 Tail tube protein XDD1_2906 8deae42bfdc9c43477b8a49cac53b404 172 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 171 2.6E-52 T 15-10-2018 IPR006498 Tail tube protein XDD1_3521 bb5eb2862e89fef233d585e622bdd0cf 267 SMART SM00382 33 230 9.6E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3521 bb5eb2862e89fef233d585e622bdd0cf 267 SUPERFAMILY SSF52540 8 239 3.97E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3521 bb5eb2862e89fef233d585e622bdd0cf 267 Gene3D G3DSA:3.40.50.300 7 250 6.0E-62 T 15-10-2018 XDD1_3521 bb5eb2862e89fef233d585e622bdd0cf 267 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_3521 bb5eb2862e89fef233d585e622bdd0cf 267 Pfam PF00005 ABC transporter 26 172 2.9E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_2036 cf62123d331125316fc247f95cf3010d 500 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 22 495 2.2E-221 T 15-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath XDD1_2036 cf62123d331125316fc247f95cf3010d 500 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 71 495 9.3E-192 T 15-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath XDD1_0333 33cd67699c33d338fad12c1cfaf70075 516 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 515 2.2E-251 T 15-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 XDD1_0333 33cd67699c33d338fad12c1cfaf70075 516 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 15-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 XDD1_0333 33cd67699c33d338fad12c1cfaf70075 516 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 316 6.6E-77 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XDD1_0333 33cd67699c33d338fad12c1cfaf70075 516 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 428 515 2.8E-25 T 15-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 XDD1_0333 33cd67699c33d338fad12c1cfaf70075 516 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 422 7.7E-25 T 15-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 XDD1_0333 33cd67699c33d338fad12c1cfaf70075 516 SUPERFAMILY SSF55021 423 515 2.29E-25 T 15-10-2018 XDD1_0333 33cd67699c33d338fad12c1cfaf70075 516 SUPERFAMILY SSF53686 17 362 4.71E-101 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XDD1_0333 33cd67699c33d338fad12c1cfaf70075 516 Gene3D G3DSA:3.40.1020.10 338 516 3.3E-69 T 15-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 XDD1_0333 33cd67699c33d338fad12c1cfaf70075 516 Gene3D G3DSA:3.40.50.1100 25 327 9.6E-131 T 15-10-2018 XDD1_0333 33cd67699c33d338fad12c1cfaf70075 516 Gene3D G3DSA:3.40.50.1100 61 157 9.6E-131 T 15-10-2018 XDD1_2380 7e9b1315c5858268a73b0557faa247f1 232 PRINTS PR01837 MgtC/SapB protein signature 57 79 5.0E-45 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 XDD1_2380 7e9b1315c5858268a73b0557faa247f1 232 PRINTS PR01837 MgtC/SapB protein signature 13 32 5.0E-45 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 XDD1_2380 7e9b1315c5858268a73b0557faa247f1 232 PRINTS PR01837 MgtC/SapB protein signature 84 108 5.0E-45 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 XDD1_2380 7e9b1315c5858268a73b0557faa247f1 232 PRINTS PR01837 MgtC/SapB protein signature 32 50 5.0E-45 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 XDD1_2380 7e9b1315c5858268a73b0557faa247f1 232 Gene3D G3DSA:3.30.70.260 141 230 3.8E-15 T 15-10-2018 XDD1_2380 7e9b1315c5858268a73b0557faa247f1 232 Pfam PF02308 MgtC family 10 130 9.3E-38 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 XDD1_2628 1665a74638d441aaaea5cf3331587269 564 Pfam PF17392 Urocanase C-terminal domain 353 547 7.2E-93 T 15-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 XDD1_2628 1665a74638d441aaaea5cf3331587269 564 Gene3D G3DSA:3.40.1770.10 18 543 1.7E-261 T 15-10-2018 XDD1_2628 1665a74638d441aaaea5cf3331587269 564 SUPERFAMILY SSF111326 9 556 2.22E-262 T 15-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 XDD1_2628 1665a74638d441aaaea5cf3331587269 564 TIGRFAM TIGR01228 hutU: urocanate hydratase 13 555 1.3E-303 T 15-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 XDD1_2628 1665a74638d441aaaea5cf3331587269 564 Gene3D G3DSA:3.40.50.10730 143 350 1.7E-261 T 15-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 XDD1_2628 1665a74638d441aaaea5cf3331587269 564 Pfam PF01175 Urocanase Rossmann-like domain 142 350 2.8E-85 T 15-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 XDD1_2628 1665a74638d441aaaea5cf3331587269 564 PIRSF PIRSF001423 2 561 2.6E-294 T 15-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 XDD1_2628 1665a74638d441aaaea5cf3331587269 564 ProSitePatterns PS01233 Urocanase signature. 443 458 - T 15-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 XDD1_2628 1665a74638d441aaaea5cf3331587269 564 Pfam PF17391 Urocanase N-terminal domain 13 139 6.2E-62 T 15-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 XDD1_2628 1665a74638d441aaaea5cf3331587269 564 Hamap MF_00577 Urocanate hydratase [hutU]. 5 557 50.383 T 15-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 XDD1_2259 87d2fe904da42996c8915c179c27bc98 514 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 514 350.163 T 15-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 XDD1_2259 87d2fe904da42996c8915c179c27bc98 514 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 512 1.4E-276 T 15-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 XDD1_2259 87d2fe904da42996c8915c179c27bc98 514 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 513 2.5E-277 T 15-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 XDD1_1163 a2c005bd6c3b7049913ba47547a267a8 304 SUPERFAMILY SSF53850 83 293 4.46E-44 T 15-10-2018 XDD1_1163 a2c005bd6c3b7049913ba47547a267a8 304 SUPERFAMILY SSF46785 7 78 1.84E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1163 a2c005bd6c3b7049913ba47547a267a8 304 Pfam PF03466 LysR substrate binding domain 88 291 2.2E-40 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_1163 a2c005bd6c3b7049913ba47547a267a8 304 Gene3D G3DSA:3.40.190.290 91 291 3.0E-62 T 15-10-2018 XDD1_1163 a2c005bd6c3b7049913ba47547a267a8 304 Gene3D G3DSA:1.10.10.10 3 89 7.9E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1163 a2c005bd6c3b7049913ba47547a267a8 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 4.6E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0646 e8d9fcb663d924ffee9e18b609eb8660 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 8.8E-29 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XDD1_0646 e8d9fcb663d924ffee9e18b609eb8660 97 Gene3D G3DSA:2.30.33.40 1 97 2.1E-35 T 15-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 XDD1_0646 e8d9fcb663d924ffee9e18b609eb8660 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.322 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XDD1_0646 e8d9fcb663d924ffee9e18b609eb8660 97 SUPERFAMILY SSF50129 1 96 4.71E-30 T 15-10-2018 IPR011032 GroES-like superfamily XDD1_0646 e8d9fcb663d924ffee9e18b609eb8660 97 PRINTS PR00297 10kDa chaperonin signature 25 46 3.2E-27 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XDD1_0646 e8d9fcb663d924ffee9e18b609eb8660 97 PRINTS PR00297 10kDa chaperonin signature 60 72 3.2E-27 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XDD1_0646 e8d9fcb663d924ffee9e18b609eb8660 97 PRINTS PR00297 10kDa chaperonin signature 3 18 3.2E-27 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XDD1_0646 e8d9fcb663d924ffee9e18b609eb8660 97 PRINTS PR00297 10kDa chaperonin signature 82 95 3.2E-27 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XDD1_0646 e8d9fcb663d924ffee9e18b609eb8660 97 SMART SM00883 2 95 1.2E-47 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XDD1_0646 e8d9fcb663d924ffee9e18b609eb8660 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 15-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 XDD1_1546 8134ee8f190da9daef52125c58e7f3a3 387 Gene3D G3DSA:1.10.287.470 94 185 1.3E-83 T 15-10-2018 XDD1_1546 8134ee8f190da9daef52125c58e7f3a3 387 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 294 2.7E-22 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XDD1_1546 8134ee8f190da9daef52125c58e7f3a3 387 Gene3D G3DSA:2.40.420.20 44 376 1.3E-83 T 15-10-2018 XDD1_1546 8134ee8f190da9daef52125c58e7f3a3 387 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 378 3.7E-52 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 XDD1_1546 8134ee8f190da9daef52125c58e7f3a3 387 SUPERFAMILY SSF111369 50 298 1.19E-30 T 15-10-2018 XDD1_1546 8134ee8f190da9daef52125c58e7f3a3 387 Gene3D G3DSA:2.40.30.170 49 301 1.3E-83 T 15-10-2018 XDD1_1546 8134ee8f190da9daef52125c58e7f3a3 387 Gene3D G3DSA:2.40.50.100 60 222 1.3E-83 T 15-10-2018 XDD1_2002 fc75864d7e1fa394b48165e49d511181 205 SUPERFAMILY SSF89392 35 204 3.73E-49 T 15-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX XDD1_2002 fc75864d7e1fa394b48165e49d511181 205 Gene3D G3DSA:2.50.20.10 30 205 4.4E-55 T 15-10-2018 XDD1_2002 fc75864d7e1fa394b48165e49d511181 205 Pfam PF03550 Outer membrane lipoprotein LolB 49 202 1.2E-45 T 15-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 XDD1_2002 fc75864d7e1fa394b48165e49d511181 205 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 4 204 26.815 T 15-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 XDD1_2002 fc75864d7e1fa394b48165e49d511181 205 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 4 203 1.2E-61 T 15-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 XDD1_0732 297c1ac3b3e5c1479624416fa8276287 451 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 119 134 - T 15-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 XDD1_0732 297c1ac3b3e5c1479624416fa8276287 451 SMART SM00941 360 434 1.5E-29 T 15-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 XDD1_0732 297c1ac3b3e5c1479624416fa8276287 451 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 361 432 1.8E-21 T 15-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 XDD1_0732 297c1ac3b3e5c1479624416fa8276287 451 Pfam PF00591 Glycosyl transferase family, a/b domain 86 315 3.6E-49 T 15-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 XDD1_0732 297c1ac3b3e5c1479624416fa8276287 451 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 11 431 1.4E-161 T 15-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 XDD1_0732 297c1ac3b3e5c1479624416fa8276287 451 SUPERFAMILY SSF52418 81 340 5.63E-89 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 XDD1_0732 297c1ac3b3e5c1479624416fa8276287 451 SUPERFAMILY SSF54680 353 449 5.1E-27 T 15-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 XDD1_0732 297c1ac3b3e5c1479624416fa8276287 451 Gene3D G3DSA:3.90.1170.30 349 443 1.5E-26 T 15-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 XDD1_0732 297c1ac3b3e5c1479624416fa8276287 451 SUPERFAMILY SSF47648 9 76 3.53E-21 T 15-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 XDD1_0732 297c1ac3b3e5c1479624416fa8276287 451 Gene3D G3DSA:3.40.1030.10 76 328 2.8E-129 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 XDD1_0732 297c1ac3b3e5c1479624416fa8276287 451 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 8 449 1.3E-221 T 15-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 XDD1_0732 297c1ac3b3e5c1479624416fa8276287 451 Gene3D G3DSA:1.20.970.10 13 201 2.8E-129 T 15-10-2018 XDD1_0732 297c1ac3b3e5c1479624416fa8276287 451 Hamap MF_01628 Thymidine phosphorylase [deoA]. 8 449 46.217 T 15-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 XDD1_0732 297c1ac3b3e5c1479624416fa8276287 451 PIRSF PIRSF000478 7 450 7.7E-152 T 15-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 XDD1_0732 297c1ac3b3e5c1479624416fa8276287 451 Pfam PF02885 Glycosyl transferase family, helical bundle domain 12 73 2.5E-18 T 15-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 5.5E-52 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.2E-75 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.2E-75 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.2E-75 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 1.2E-75 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.2E-75 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.2E-75 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.2E-75 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.2E-75 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.2E-75 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.0E-41 T 15-10-2018 XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.0E-41 T 15-10-2018 XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.0E-41 T 15-10-2018 XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.0E-41 T 15-10-2018 XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.0E-41 T 15-10-2018 XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 SUPERFAMILY SSF51905 1 313 7.5E-56 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 15-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 Gene3D G3DSA:3.50.50.60 118 244 5.4E-131 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 Gene3D G3DSA:3.50.50.60 9 311 5.4E-131 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1555 9996b381915395f13fffeaea5ceb2ea0 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 4.7E-125 T 15-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 XDD1_1322 2a7f2b5412be830a30d070bae3e43d9a 177 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 177 40.99 T 15-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 XDD1_1322 2a7f2b5412be830a30d070bae3e43d9a 177 PIRSF PIRSF019401 53 177 2.3E-33 T 15-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 XDD1_1322 2a7f2b5412be830a30d070bae3e43d9a 177 PIRSF PIRSF019401 1 70 8.3E-17 T 15-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 XDD1_1322 2a7f2b5412be830a30d070bae3e43d9a 177 Gene3D G3DSA:1.10.1220.10 1 40 3.1E-23 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 XDD1_1322 2a7f2b5412be830a30d070bae3e43d9a 177 SUPERFAMILY SSF82808 62 177 3.79E-48 T 15-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 XDD1_1322 2a7f2b5412be830a30d070bae3e43d9a 177 Pfam PF03925 SeqA protein C-terminal domain 68 175 4.9E-49 T 15-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 XDD1_1322 2a7f2b5412be830a30d070bae3e43d9a 177 Pfam PF17206 SeqA protein N-terminal domain 1 36 3.0E-22 T 15-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal XDD1_1322 2a7f2b5412be830a30d070bae3e43d9a 177 Gene3D G3DSA:1.20.1380.10 64 177 1.5E-47 T 15-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 XDD1_1322 2a7f2b5412be830a30d070bae3e43d9a 177 SUPERFAMILY SSF47598 1 35 3.11E-12 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XDD1_0934 bfc2a922c8320d3560194b2dacfd4b1b 73 Pfam PF01266 FAD dependent oxidoreductase 2 53 4.9E-10 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 XDD1_0934 bfc2a922c8320d3560194b2dacfd4b1b 73 Gene3D G3DSA:3.50.50.60 1 69 1.6E-8 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0934 bfc2a922c8320d3560194b2dacfd4b1b 73 SUPERFAMILY SSF51905 1 61 8.93E-9 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1193 24ec5554a843c1cd2f899387c8c553e1 417 SUPERFAMILY SSF53720 2 412 4.19E-114 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XDD1_1193 24ec5554a843c1cd2f899387c8c553e1 417 Pfam PF00171 Aldehyde dehydrogenase family 5 282 1.8E-16 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 XDD1_1193 24ec5554a843c1cd2f899387c8c553e1 417 PIRSF PIRSF000151 1 416 1.6E-173 T 15-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 XDD1_1193 24ec5554a843c1cd2f899387c8c553e1 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 416 40.74 T 15-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XDD1_1193 24ec5554a843c1cd2f899387c8c553e1 417 Gene3D G3DSA:3.40.309.10 222 374 9.3E-164 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 XDD1_1193 24ec5554a843c1cd2f899387c8c553e1 417 Gene3D G3DSA:3.40.605.10 14 411 9.3E-164 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 XDD1_1193 24ec5554a843c1cd2f899387c8c553e1 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 15-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XDD1_1193 24ec5554a843c1cd2f899387c8c553e1 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 406 4.5E-184 T 15-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XDD1_2705 2784ac5e685870b1cbdd031fa4c35b8b 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 15-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site XDD1_2705 2784ac5e685870b1cbdd031fa4c35b8b 85 Gene3D G3DSA:3.30.1340.10 1 85 1.9E-34 T 15-10-2018 IPR035895 HPr-like superfamily XDD1_2705 2784ac5e685870b1cbdd031fa4c35b8b 85 Pfam PF00381 PTS HPr component phosphorylation site 3 81 6.7E-28 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like XDD1_2705 2784ac5e685870b1cbdd031fa4c35b8b 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 15-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site XDD1_2705 2784ac5e685870b1cbdd031fa4c35b8b 85 SUPERFAMILY SSF55594 1 81 2.75E-27 T 15-10-2018 IPR035895 HPr-like superfamily XDD1_2705 2784ac5e685870b1cbdd031fa4c35b8b 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.0E-19 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like XDD1_2705 2784ac5e685870b1cbdd031fa4c35b8b 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.0E-19 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like XDD1_2705 2784ac5e685870b1cbdd031fa4c35b8b 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.0E-19 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like XDD1_2705 2784ac5e685870b1cbdd031fa4c35b8b 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 6.3E-30 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like XDD1_2517 563187b0b81b8211dffd6d376d7735c4 671 SUPERFAMILY SSF56935 49 671 2.11E-127 T 15-10-2018 XDD1_2517 563187b0b81b8211dffd6d376d7735c4 671 Gene3D G3DSA:2.40.170.20 184 671 6.8E-135 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XDD1_2517 563187b0b81b8211dffd6d376d7735c4 671 Gene3D G3DSA:2.170.130.10 49 178 1.9E-38 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XDD1_2517 563187b0b81b8211dffd6d376d7735c4 671 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 173 1.4E-27 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain XDD1_2517 563187b0b81b8211dffd6d376d7735c4 671 Pfam PF00593 TonB dependent receptor 282 669 9.5E-59 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XDD1_2405 8c414a4b49c261c767a0e10595b62093 760 Pfam PF03949 Malic enzyme, NAD binding domain 166 362 1.5E-18 T 15-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 XDD1_2405 8c414a4b49c261c767a0e10595b62093 760 Gene3D G3DSA:3.40.50.10380 1 161 1.7E-68 T 15-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 XDD1_2405 8c414a4b49c261c767a0e10595b62093 760 ProSitePatterns PS00331 Malic enzymes signature. 160 176 - T 15-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 XDD1_2405 8c414a4b49c261c767a0e10595b62093 760 Gene3D G3DSA:3.40.50.10950 448 752 1.2E-92 T 15-10-2018 XDD1_2405 8c414a4b49c261c767a0e10595b62093 760 SMART SM01274 19 152 4.6E-80 T 15-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 XDD1_2405 8c414a4b49c261c767a0e10595b62093 760 Pfam PF00390 Malic enzyme, N-terminal domain 20 152 2.3E-27 T 15-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 XDD1_2405 8c414a4b49c261c767a0e10595b62093 760 SUPERFAMILY SSF53659 431 755 7.81E-89 T 15-10-2018 XDD1_2405 8c414a4b49c261c767a0e10595b62093 760 SMART SM00919 164 402 2.2E-141 T 15-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 XDD1_2405 8c414a4b49c261c767a0e10595b62093 760 SUPERFAMILY SSF53223 11 162 4.24E-53 T 15-10-2018 XDD1_2405 8c414a4b49c261c767a0e10595b62093 760 Gene3D G3DSA:3.40.50.10750 574 728 1.2E-92 T 15-10-2018 XDD1_2405 8c414a4b49c261c767a0e10595b62093 760 PIRSF PIRSF036684 1 759 0.0 T 15-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 XDD1_2405 8c414a4b49c261c767a0e10595b62093 760 Gene3D G3DSA:3.40.50.720 162 447 6.6E-82 T 15-10-2018 XDD1_2405 8c414a4b49c261c767a0e10595b62093 760 SUPERFAMILY SSF51735 164 453 4.14E-86 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2405 8c414a4b49c261c767a0e10595b62093 760 Pfam PF01515 Phosphate acetyl/butaryl transferase 431 752 4.1E-98 T 15-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 XDD1_1638 21d89ed901dcee9ff2167d059d1f624a 92 SUPERFAMILY SSF54975 2 91 5.01E-29 T 15-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 XDD1_1638 21d89ed901dcee9ff2167d059d1f624a 92 Pfam PF00708 Acylphosphatase 6 90 2.5E-25 T 15-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 XDD1_1638 21d89ed901dcee9ff2167d059d1f624a 92 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 15-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 XDD1_1638 21d89ed901dcee9ff2167d059d1f624a 92 Gene3D G3DSA:3.30.70.100 1 91 3.3E-28 T 15-10-2018 XDD1_1638 21d89ed901dcee9ff2167d059d1f624a 92 Hamap MF_01450 Acylphosphatase [yccX]. 2 91 28.62 T 15-10-2018 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 XDD1_1638 21d89ed901dcee9ff2167d059d1f624a 92 PRINTS PR00112 Acylphosphatase signature 5 20 2.8E-8 T 15-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 XDD1_1638 21d89ed901dcee9ff2167d059d1f624a 92 PRINTS PR00112 Acylphosphatase signature 26 51 2.8E-8 T 15-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 XDD1_1638 21d89ed901dcee9ff2167d059d1f624a 92 PRINTS PR00112 Acylphosphatase signature 61 81 2.8E-8 T 15-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 XDD1_1638 21d89ed901dcee9ff2167d059d1f624a 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 15-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 XDD1_3917 b35b76f198080c267f3bcceb1f508942 690 Gene3D G3DSA:3.10.129.10 529 683 3.3E-41 T 15-10-2018 XDD1_3917 b35b76f198080c267f3bcceb1f508942 690 SUPERFAMILY SSF54637 532 683 4.48E-33 T 15-10-2018 IPR029069 HotDog domain superfamily XDD1_3917 b35b76f198080c267f3bcceb1f508942 690 Gene3D G3DSA:3.40.605.10 10 490 1.7E-152 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 XDD1_3917 b35b76f198080c267f3bcceb1f508942 690 Pfam PF00171 Aldehyde dehydrogenase family 12 502 8.3E-62 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 XDD1_3917 b35b76f198080c267f3bcceb1f508942 690 SUPERFAMILY SSF53720 5 507 4.06E-82 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XDD1_3917 b35b76f198080c267f3bcceb1f508942 690 Gene3D G3DSA:3.40.309.10 259 478 1.7E-152 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 XDD1_3917 b35b76f198080c267f3bcceb1f508942 690 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 4 681 0.0 T 15-10-2018 IPR011966 Phenylacetic acid degradation protein PaaN KEGG: 00360+3.3.2.12+1.2.1.91 XDD1_3917 b35b76f198080c267f3bcceb1f508942 690 Pfam PF01575 MaoC like domain 543 645 1.5E-28 T 15-10-2018 IPR002539 MaoC-like dehydratase domain XDD1_3217 79fb3b891c0d77071149c3f8b649e831 549 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 545 2.6E-194 T 15-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 XDD1_3217 79fb3b891c0d77071149c3f8b649e831 549 Gene3D G3DSA:1.20.1530.20 1 298 7.0E-12 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily XDD1_3217 79fb3b891c0d77071149c3f8b649e831 549 Pfam PF00999 Sodium/hydrogen exchanger family 8 421 4.7E-76 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 XDD1_3381 259117bf25653b269c71aee11847f813 782 SUPERFAMILY SSF53098 7 389 1.79E-87 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3381 259117bf25653b269c71aee11847f813 782 Pfam PF00136 DNA polymerase family B 380 735 5.3E-39 T 15-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3381 259117bf25653b269c71aee11847f813 782 Gene3D G3DSA:3.30.70.2250 44 110 6.1E-46 T 15-10-2018 XDD1_3381 259117bf25653b269c71aee11847f813 782 Gene3D G3DSA:2.40.50.590 9 148 6.1E-46 T 15-10-2018 XDD1_3381 259117bf25653b269c71aee11847f813 782 Pfam PF03104 DNA polymerase family B, exonuclease domain 78 296 1.0E-9 T 15-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3381 259117bf25653b269c71aee11847f813 782 Gene3D G3DSA:1.10.132.60 636 780 3.2E-59 T 15-10-2018 XDD1_3381 259117bf25653b269c71aee11847f813 782 SMART SM00486 148 555 7.4E-67 T 15-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3381 259117bf25653b269c71aee11847f813 782 ProSitePatterns PS00116 DNA polymerase family B signature. 543 551 - T 15-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3381 259117bf25653b269c71aee11847f813 782 SUPERFAMILY SSF56672 385 773 6.12E-111 T 15-10-2018 XDD1_3381 259117bf25653b269c71aee11847f813 782 Gene3D G3DSA:3.30.420.10 151 347 9.3E-75 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_3381 259117bf25653b269c71aee11847f813 782 Gene3D G3DSA:3.90.1600.10 440 629 1.5E-53 T 15-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3381 259117bf25653b269c71aee11847f813 782 Gene3D G3DSA:3.90.1600.10 348 439 2.6E-26 T 15-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3381 259117bf25653b269c71aee11847f813 782 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 7.0E-10 T 15-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3381 259117bf25653b269c71aee11847f813 782 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 489 501 7.0E-10 T 15-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3381 259117bf25653b269c71aee11847f813 782 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 541 549 7.0E-10 T 15-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3598 878183490bb8b5d62ee707b78a1f8d5e 255 Pfam PF03746 LamB/YcsF family 5 242 1.0E-100 T 15-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 XDD1_3598 878183490bb8b5d62ee707b78a1f8d5e 255 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 3 247 45.46 T 15-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 XDD1_3598 878183490bb8b5d62ee707b78a1f8d5e 255 SUPERFAMILY SSF88713 4 252 1.19E-99 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 XDD1_3598 878183490bb8b5d62ee707b78a1f8d5e 255 Gene3D G3DSA:3.20.20.370 3 254 5.6E-104 T 15-10-2018 XDD1_0625 1ee4c3fb1043eed484ec657df3cf4d14 151 SUPERFAMILY SSF158682 22 150 1.7E-19 T 15-10-2018 IPR029024 TerB-like XDD1_0625 1ee4c3fb1043eed484ec657df3cf4d14 151 Gene3D G3DSA:1.10.3680.10 1 151 2.8E-45 T 15-10-2018 IPR029024 TerB-like XDD1_0625 1ee4c3fb1043eed484ec657df3cf4d14 151 Pfam PF05099 Tellurite resistance protein TerB 15 150 2.6E-25 T 15-10-2018 IPR007791 Co-chaperone DjlA, N-terminal XDD1_2275 87e83ee290a70dd2c593f400a79c35fd 757 Gene3D G3DSA:3.40.640.10 142 442 1.1E-96 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_2275 87e83ee290a70dd2c593f400a79c35fd 757 SUPERFAMILY SSF53383 142 609 3.1E-108 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_2275 87e83ee290a70dd2c593f400a79c35fd 757 Gene3D G3DSA:3.40.50.2300 1 141 1.8E-39 T 15-10-2018 XDD1_2275 87e83ee290a70dd2c593f400a79c35fd 757 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 20 136 3.2E-18 T 15-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 XDD1_2275 87e83ee290a70dd2c593f400a79c35fd 757 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 142 592 1.6E-183 T 15-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 XDD1_2275 87e83ee290a70dd2c593f400a79c35fd 757 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 383 397 - T 15-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 XDD1_2275 87e83ee290a70dd2c593f400a79c35fd 757 PIRSF PIRSF009393 3 757 1.4E-266 T 15-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 XDD1_2275 87e83ee290a70dd2c593f400a79c35fd 757 Gene3D G3DSA:3.90.1150.10 443 632 1.8E-81 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_2275 87e83ee290a70dd2c593f400a79c35fd 757 SUPERFAMILY SSF55904 612 757 1.02E-33 T 15-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 XDD1_2275 87e83ee290a70dd2c593f400a79c35fd 757 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 617 745 1.4E-44 T 15-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 XDD1_2275 87e83ee290a70dd2c593f400a79c35fd 757 Gene3D G3DSA:3.90.100.10 633 757 9.6E-48 T 15-10-2018 XDD1_1034 e226a781f84c14e333cc42b8376892e0 277 SUPERFAMILY SSF46689 9 85 4.48E-18 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1034 e226a781f84c14e333cc42b8376892e0 277 Gene3D G3DSA:3.40.50.10490 108 277 2.9E-34 T 15-10-2018 XDD1_1034 e226a781f84c14e333cc42b8376892e0 277 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 74 1.4E-11 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 XDD1_1034 e226a781f84c14e333cc42b8376892e0 277 Gene3D G3DSA:1.10.10.10 5 82 4.1E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1034 e226a781f84c14e333cc42b8376892e0 277 SUPERFAMILY SSF53697 107 273 5.06E-28 T 15-10-2018 XDD1_1034 e226a781f84c14e333cc42b8376892e0 277 Pfam PF01380 SIS domain 141 267 2.9E-22 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 SUPERFAMILY SSF50677 226 415 3.35E-57 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.3 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 SUPERFAMILY SSF47323 662 859 2.8E-36 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 Gene3D G3DSA:3.90.740.10 227 414 0.0 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 Pfam PF08264 Anticodon-binding domain of tRNA 700 821 1.5E-15 T 15-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 Gene3D G3DSA:3.40.50.620 33 566 0.0 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 3.1E-51 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 3.1E-51 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 3.1E-51 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 3.1E-51 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 3.1E-51 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 3.1E-51 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 3.1E-51 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 Gene3D G3DSA:3.10.20.590 799 860 3.7E-24 T 15-10-2018 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 171 2.2E-26 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 572 2.4E-6 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 650 3.8E-7 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 SUPERFAMILY SSF52374 5 668 2.62E-140 T 15-10-2018 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 3.7E-76 T 15-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 Gene3D G3DSA:1.10.730.10 8 791 0.0 T 15-10-2018 XDD1_1277 7e2e82afa5ea40feed9492d19f1843dd 860 Gene3D G3DSA:3.10.330.110 567 628 0.0 T 15-10-2018 XDD1_3294 c6a25b2c36296e9672de52371f6d3d6b 265 SUPERFAMILY SSF51161 1 258 1.45E-77 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily XDD1_3294 c6a25b2c36296e9672de52371f6d3d6b 265 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XDD1_3294 c6a25b2c36296e9672de52371f6d3d6b 265 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XDD1_3294 c6a25b2c36296e9672de52371f6d3d6b 265 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 265 47.856 T 15-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 XDD1_3294 c6a25b2c36296e9672de52371f6d3d6b 265 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 263 3.3E-107 T 15-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 XDD1_3294 c6a25b2c36296e9672de52371f6d3d6b 265 Gene3D G3DSA:2.160.10.10 1 196 2.2E-53 T 15-10-2018 XDD1_3294 c6a25b2c36296e9672de52371f6d3d6b 265 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 264 8.3E-28 T 15-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 XDD1_3294 c6a25b2c36296e9672de52371f6d3d6b 265 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 8.1E-8 T 15-10-2018 IPR001451 Hexapeptide repeat XDD1_3294 c6a25b2c36296e9672de52371f6d3d6b 265 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 52 3.9E-9 T 15-10-2018 IPR001451 Hexapeptide repeat XDD1_3294 c6a25b2c36296e9672de52371f6d3d6b 265 PIRSF PIRSF000456 4 265 5.1E-105 T 15-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 XDD1_3294 c6a25b2c36296e9672de52371f6d3d6b 265 Gene3D G3DSA:1.20.1180.10 197 265 5.4E-23 T 15-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 XDD1_2897 698b57b404b63a195928103a9854a01c 235 Hamap MF_01146 Aquaporin Z [aqpZ]. 2 230 35.702 T 15-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 XDD1_2897 698b57b404b63a195928103a9854a01c 235 Gene3D G3DSA:1.20.1080.10 1 231 1.1E-89 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 XDD1_2897 698b57b404b63a195928103a9854a01c 235 Pfam PF00230 Major intrinsic protein 3 223 5.6E-51 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XDD1_2897 698b57b404b63a195928103a9854a01c 235 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 223 3.3E-62 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XDD1_2897 698b57b404b63a195928103a9854a01c 235 SUPERFAMILY SSF81338 2 228 3.01E-67 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 XDD1_2897 698b57b404b63a195928103a9854a01c 235 PRINTS PR00783 Major intrinsic protein family signature 80 99 2.7E-53 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XDD1_2897 698b57b404b63a195928103a9854a01c 235 PRINTS PR00783 Major intrinsic protein family signature 137 155 2.7E-53 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XDD1_2897 698b57b404b63a195928103a9854a01c 235 PRINTS PR00783 Major intrinsic protein family signature 167 189 2.7E-53 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XDD1_2897 698b57b404b63a195928103a9854a01c 235 PRINTS PR00783 Major intrinsic protein family signature 206 226 2.7E-53 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XDD1_2897 698b57b404b63a195928103a9854a01c 235 PRINTS PR00783 Major intrinsic protein family signature 3 22 2.7E-53 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XDD1_2897 698b57b404b63a195928103a9854a01c 235 PRINTS PR00783 Major intrinsic protein family signature 43 67 2.7E-53 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XDD1_2897 698b57b404b63a195928103a9854a01c 235 ProSitePatterns PS00221 MIP family signature. 61 69 - T 15-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 XDD1_2653 0aec594f1ba32fdb9ef4fbdf60c15add 315 Gene3D G3DSA:3.90.226.10 25 287 3.8E-87 T 15-10-2018 XDD1_2653 0aec594f1ba32fdb9ef4fbdf60c15add 315 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 5.9E-143 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XDD1_2653 0aec594f1ba32fdb9ef4fbdf60c15add 315 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 3.2E-38 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XDD1_2653 0aec594f1ba32fdb9ef4fbdf60c15add 315 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 3.2E-38 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XDD1_2653 0aec594f1ba32fdb9ef4fbdf60c15add 315 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 3.2E-38 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XDD1_2653 0aec594f1ba32fdb9ef4fbdf60c15add 315 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 3.2E-38 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XDD1_2653 0aec594f1ba32fdb9ef4fbdf60c15add 315 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 3.2E-38 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XDD1_2653 0aec594f1ba32fdb9ef4fbdf60c15add 315 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.846 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XDD1_2653 0aec594f1ba32fdb9ef4fbdf60c15add 315 SUPERFAMILY SSF52096 25 283 2.52E-87 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XDD1_2653 0aec594f1ba32fdb9ef4fbdf60c15add 315 Pfam PF01039 Carboxyl transferase domain 100 242 1.3E-14 T 15-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 XDD1_1604 b14ca06f5419ddc7516667eee140a2f5 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 2.5E-91 T 15-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XDD1_1604 b14ca06f5419ddc7516667eee140a2f5 172 Gene3D G3DSA:3.10.129.10 2 172 3.2E-63 T 15-10-2018 XDD1_1604 b14ca06f5419ddc7516667eee140a2f5 172 SUPERFAMILY SSF54637 4 169 1.86E-54 T 15-10-2018 IPR029069 HotDog domain superfamily XDD1_1604 b14ca06f5419ddc7516667eee140a2f5 172 Pfam PF07977 FabA-like domain 29 158 3.7E-53 T 15-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XDD1_1604 b14ca06f5419ddc7516667eee140a2f5 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 50.277 T 15-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XDD1_2000 8ec8bd959962413a3a4422d0e7d0b775 336 Pfam PF14572 Phosphoribosyl synthetase-associated domain 225 334 1.4E-30 T 15-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 XDD1_2000 8ec8bd959962413a3a4422d0e7d0b775 336 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 25 142 1.7E-49 T 15-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 XDD1_2000 8ec8bd959962413a3a4422d0e7d0b775 336 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 25 335 5.0E-127 T 15-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 XDD1_2000 8ec8bd959962413a3a4422d0e7d0b775 336 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 150 165 - T 15-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 XDD1_2000 8ec8bd959962413a3a4422d0e7d0b775 336 Gene3D G3DSA:3.40.50.2020 28 323 4.1E-137 T 15-10-2018 XDD1_2000 8ec8bd959962413a3a4422d0e7d0b775 336 SMART SM01400 25 142 1.7E-76 T 15-10-2018 XDD1_2000 8ec8bd959962413a3a4422d0e7d0b775 336 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 25 335 49.923 T 15-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 XDD1_2000 8ec8bd959962413a3a4422d0e7d0b775 336 SUPERFAMILY SSF53271 90 327 4.53E-67 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like XDD1_2000 8ec8bd959962413a3a4422d0e7d0b775 336 Gene3D G3DSA:3.40.50.2020 169 311 4.1E-137 T 15-10-2018 XDD1_1758 e5ba26f05c0f8ff7c7142a6ce1d08536 291 SUPERFAMILY SSF81345 5 261 2.22E-38 T 15-10-2018 IPR037294 ABC transporter, BtuC-like XDD1_1758 e5ba26f05c0f8ff7c7142a6ce1d08536 291 Gene3D G3DSA:1.10.3470.10 4 271 4.0E-8 T 15-10-2018 IPR037294 ABC transporter, BtuC-like XDD1_1758 e5ba26f05c0f8ff7c7142a6ce1d08536 291 Pfam PF00950 ABC 3 transport family 10 265 1.3E-86 T 15-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 XDD1_3224 4765b25ceb26092735ae25c6247462bd 133 Pfam PF01850 PIN domain 4 119 2.7E-15 T 15-10-2018 IPR002716 PIN domain XDD1_3224 4765b25ceb26092735ae25c6247462bd 133 Gene3D G3DSA:3.40.50.1010 1 127 8.4E-9 T 15-10-2018 XDD1_3224 4765b25ceb26092735ae25c6247462bd 133 SUPERFAMILY SSF88723 1 122 8.13E-19 T 15-10-2018 IPR029060 PIN-like domain superfamily XDD1_2800 99f227a645dbf841e59df75e71d126f4 523 SUPERFAMILY SSF53955 277 480 1.17E-35 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily XDD1_2800 99f227a645dbf841e59df75e71d126f4 523 SUPERFAMILY SSF53850 76 297 4.62E-41 T 15-10-2018 XDD1_2800 99f227a645dbf841e59df75e71d126f4 523 Gene3D G3DSA:3.40.190.10 69 294 1.7E-61 T 15-10-2018 XDD1_2800 99f227a645dbf841e59df75e71d126f4 523 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 83 297 1.7E-34 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XDD1_2800 99f227a645dbf841e59df75e71d126f4 523 SMART SM00062 75 299 4.1E-36 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XDD1_2800 99f227a645dbf841e59df75e71d126f4 523 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 340 368 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 XDD1_2800 99f227a645dbf841e59df75e71d126f4 523 Pfam PF01464 Transglycosylase SLT domain 327 432 2.3E-23 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 XDD1_2800 99f227a645dbf841e59df75e71d126f4 523 Gene3D G3DSA:3.40.190.10 160 255 1.7E-61 T 15-10-2018 XDD1_2800 99f227a645dbf841e59df75e71d126f4 523 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 36 507 46.726 T 15-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 XDD1_2800 99f227a645dbf841e59df75e71d126f4 523 Gene3D G3DSA:1.10.530.10 315 500 9.3E-34 T 15-10-2018 XDD1_3920 bdc87824a3fd2769ec39273adfb29d66 263 PIRSF PIRSF037834 8 263 4.1E-95 T 15-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 XDD1_3920 bdc87824a3fd2769ec39273adfb29d66 263 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 26 263 1.4E-92 T 15-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 XDD1_3920 bdc87824a3fd2769ec39273adfb29d66 263 Gene3D G3DSA:1.20.1260.10 7 263 1.5E-98 T 15-10-2018 IPR012347 Ferritin-like XDD1_3920 bdc87824a3fd2769ec39273adfb29d66 263 SUPERFAMILY SSF47240 14 257 8.38E-82 T 15-10-2018 IPR009078 Ferritin-like superfamily XDD1_3920 bdc87824a3fd2769ec39273adfb29d66 263 Pfam PF05138 Phenylacetic acid catabolic protein 15 263 6.2E-92 T 15-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 XDD1_1584 dd8d6a270f066d062ae706be4549f4e8 240 Gene3D G3DSA:1.10.10.2250 1 78 2.7E-38 T 15-10-2018 XDD1_1584 dd8d6a270f066d062ae706be4549f4e8 240 Gene3D G3DSA:1.10.10.2260 88 195 7.9E-49 T 15-10-2018 XDD1_1584 dd8d6a270f066d062ae706be4549f4e8 240 Pfam PF04288 MukE-like family 10 230 5.3E-125 T 15-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 XDD1_1584 dd8d6a270f066d062ae706be4549f4e8 240 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 238 48.481 T 15-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 XDD1_3894 b630a23929aa1eff98d4a42738fbbc47 279 Gene3D G3DSA:3.30.70.2350 1 70 8.6E-23 T 15-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily XDD1_3894 b630a23929aa1eff98d4a42738fbbc47 279 Pfam PF01694 Rhomboid family 133 271 8.0E-28 T 15-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 XDD1_3894 b630a23929aa1eff98d4a42738fbbc47 279 SUPERFAMILY SSF144091 96 271 4.84E-40 T 15-10-2018 XDD1_3894 b630a23929aa1eff98d4a42738fbbc47 279 Gene3D G3DSA:1.20.1540.10 94 273 4.3E-55 T 15-10-2018 IPR035952 Rhomboid-like superfamily XDD1_3894 b630a23929aa1eff98d4a42738fbbc47 279 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 272 9.3E-108 T 15-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 XDD1_3894 b630a23929aa1eff98d4a42738fbbc47 279 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 277 43.429 T 15-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 XDD1_3894 b630a23929aa1eff98d4a42738fbbc47 279 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 85 2.7E-26 T 15-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 XDD1_3954 442cafc1f9f792a011de11c86807a9f8 463 Gene3D G3DSA:3.40.640.10 95 359 5.6E-154 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_3954 442cafc1f9f792a011de11c86807a9f8 463 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 9 457 8.4E-183 T 15-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 XDD1_3954 442cafc1f9f792a011de11c86807a9f8 463 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 463 240.245 T 15-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 XDD1_3954 442cafc1f9f792a011de11c86807a9f8 463 Pfam PF03841 L-seryl-tRNA selenium transferase 83 451 1.4E-167 T 15-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 XDD1_3954 442cafc1f9f792a011de11c86807a9f8 463 Pfam PF12390 Selenocysteine synthase N terminal 9 48 3.9E-12 T 15-10-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 XDD1_3954 442cafc1f9f792a011de11c86807a9f8 463 SUPERFAMILY SSF53383 74 458 2.07E-45 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_3954 442cafc1f9f792a011de11c86807a9f8 463 Gene3D G3DSA:3.90.1150.110 11 453 5.6E-154 T 15-10-2018 XDD1_1795 a4c6dee42d108346a3a79765a7522fb4 383 SUPERFAMILY SSF47203 220 375 1.77E-42 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 XDD1_1795 a4c6dee42d108346a3a79765a7522fb4 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 221 371 5.0E-38 T 15-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 XDD1_1795 a4c6dee42d108346a3a79765a7522fb4 383 SUPERFAMILY SSF56645 7 227 1.7E-61 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 XDD1_1795 a4c6dee42d108346a3a79765a7522fb4 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 115 1.9E-26 T 15-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 XDD1_1795 a4c6dee42d108346a3a79765a7522fb4 383 Gene3D G3DSA:1.20.140.10 221 368 4.5E-104 T 15-10-2018 XDD1_1795 a4c6dee42d108346a3a79765a7522fb4 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 119 209 9.2E-19 T 15-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 XDD1_1795 a4c6dee42d108346a3a79765a7522fb4 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 121 133 - T 15-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 XDD1_1795 a4c6dee42d108346a3a79765a7522fb4 383 Gene3D G3DSA:2.40.110.10 118 220 4.5E-104 T 15-10-2018 XDD1_1795 a4c6dee42d108346a3a79765a7522fb4 383 Gene3D G3DSA:1.10.540.10 14 117 4.5E-104 T 15-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 XDD1_1795 a4c6dee42d108346a3a79765a7522fb4 383 PIRSF PIRSF016578 7 180 9.8E-9 T 15-10-2018 XDD1_1795 a4c6dee42d108346a3a79765a7522fb4 383 PIRSF PIRSF016578 226 372 3.6E-6 T 15-10-2018 XDD1_0688 c43aa85464f4e8e2a3945ceb0b8224b3 332 SUPERFAMILY SSF53901 10 331 7.27E-41 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_0688 c43aa85464f4e8e2a3945ceb0b8224b3 332 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 243 331 6.4E-20 T 15-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XDD1_0688 c43aa85464f4e8e2a3945ceb0b8224b3 332 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 114 188 3.6E-20 T 15-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XDD1_0688 c43aa85464f4e8e2a3945ceb0b8224b3 332 Gene3D G3DSA:3.40.47.10 8 332 4.8E-79 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2326 ac1a864f12aa5f2c07d91f6496d02b32 103 Pfam PF03992 Antibiotic biosynthesis monooxygenase 2 75 3.0E-13 T 15-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain XDD1_2326 ac1a864f12aa5f2c07d91f6496d02b32 103 SUPERFAMILY SSF54909 2 99 2.64E-26 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel XDD1_2326 ac1a864f12aa5f2c07d91f6496d02b32 103 Gene3D G3DSA:3.30.70.100 1 93 7.1E-26 T 15-10-2018 XDD1_0798 f348544d03c053152c1b628caf51ac7d 403 PIRSF PIRSF001434 1 395 3.5E-117 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XDD1_0798 f348544d03c053152c1b628caf51ac7d 403 Gene3D G3DSA:3.40.640.10 1 258 3.9E-74 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_0798 f348544d03c053152c1b628caf51ac7d 403 Gene3D G3DSA:3.90.1150.10 259 395 4.3E-40 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_0798 f348544d03c053152c1b628caf51ac7d 403 SUPERFAMILY SSF53383 26 392 5.9E-91 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_0798 f348544d03c053152c1b628caf51ac7d 403 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 391 1.2E-111 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XDD1_0798 f348544d03c053152c1b628caf51ac7d 403 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XDD1_0798 f348544d03c053152c1b628caf51ac7d 403 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 394 9.1E-167 T 15-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 XDD1_1300 85a5e6d7c8058f2985466534e109a244 555 Gene3D G3DSA:3.90.800.10 101 209 5.9E-107 T 15-10-2018 XDD1_1300 85a5e6d7c8058f2985466534e109a244 555 Gene3D G3DSA:2.40.240.10 348 462 7.0E-47 T 15-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XDD1_1300 85a5e6d7c8058f2985466534e109a244 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.4E-9 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XDD1_1300 85a5e6d7c8058f2985466534e109a244 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 2.4E-9 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XDD1_1300 85a5e6d7c8058f2985466534e109a244 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.4E-9 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XDD1_1300 85a5e6d7c8058f2985466534e109a244 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 2.4E-9 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XDD1_1300 85a5e6d7c8058f2985466534e109a244 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 528 4.0E-62 T 15-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XDD1_1300 85a5e6d7c8058f2985466534e109a244 555 SUPERFAMILY SSF52374 10 337 5.63E-103 T 15-10-2018 XDD1_1300 85a5e6d7c8058f2985466534e109a244 555 Gene3D G3DSA:3.40.50.620 30 247 5.9E-107 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_1300 85a5e6d7c8058f2985466534e109a244 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 551 2.6E-303 T 15-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XDD1_1300 85a5e6d7c8058f2985466534e109a244 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 549 53.616 T 15-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 XDD1_1300 85a5e6d7c8058f2985466534e109a244 555 Gene3D G3DSA:1.10.1160.10 261 339 1.6E-36 T 15-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 XDD1_1300 85a5e6d7c8058f2985466534e109a244 555 SUPERFAMILY SSF50715 340 547 8.89E-79 T 15-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XDD1_1300 85a5e6d7c8058f2985466534e109a244 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 2.2E-126 T 15-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 XDD1_1300 85a5e6d7c8058f2985466534e109a244 555 Gene3D G3DSA:2.40.240.10 463 547 1.8E-30 T 15-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XDD1_1300 85a5e6d7c8058f2985466534e109a244 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_1032 0fac5cad4ddaf413b4fd7e2c7de92cf6 178 Gene3D G3DSA:3.30.420.470 8 167 7.6E-12 T 15-10-2018 XDD1_1032 0fac5cad4ddaf413b4fd7e2c7de92cf6 178 Pfam PF13358 DDE superfamily endonuclease 15 149 9.8E-34 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_3661 6492181a81a98d4e8f115bc5d1d1f5a7 297 Gene3D G3DSA:1.10.10.10 1 83 6.4E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3661 6492181a81a98d4e8f115bc5d1d1f5a7 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.3E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_3661 6492181a81a98d4e8f115bc5d1d1f5a7 297 SUPERFAMILY SSF46785 1 82 3.1E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3661 6492181a81a98d4e8f115bc5d1d1f5a7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.9E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_3661 6492181a81a98d4e8f115bc5d1d1f5a7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.9E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_3661 6492181a81a98d4e8f115bc5d1d1f5a7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.9E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0422 f80702b72a9d48829a27870b9f480df6 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 1.4E-9 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_0422 f80702b72a9d48829a27870b9f480df6 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 1.4E-9 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_0422 f80702b72a9d48829a27870b9f480df6 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 1.4E-9 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_0422 f80702b72a9d48829a27870b9f480df6 426 SUPERFAMILY SSF54980 366 421 2.73E-12 T 15-10-2018 IPR035647 EF-G domain III/V-like XDD1_0422 f80702b72a9d48829a27870b9f480df6 426 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 4.9E-28 T 15-10-2018 IPR032305 GTP-binding protein, middle domain XDD1_0422 f80702b72a9d48829a27870b9f480df6 426 Gene3D G3DSA:3.40.50.300 197 367 1.0E-39 T 15-10-2018 XDD1_0422 f80702b72a9d48829a27870b9f480df6 426 Gene3D G3DSA:3.40.50.11060 17 138 4.6E-37 T 15-10-2018 XDD1_0422 f80702b72a9d48829a27870b9f480df6 426 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.654 T 15-10-2018 IPR016496 GTPase HflX GO:0005525 XDD1_0422 f80702b72a9d48829a27870b9f480df6 426 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 6.0E-31 T 15-10-2018 IPR025121 GTPase HflX, N-terminal XDD1_0422 f80702b72a9d48829a27870b9f480df6 426 PIRSF PIRSF006809 5 420 1.2E-146 T 15-10-2018 IPR016496 GTPase HflX GO:0005525 XDD1_0422 f80702b72a9d48829a27870b9f480df6 426 Pfam PF01926 50S ribosome-binding GTPase 200 318 3.4E-21 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_0422 f80702b72a9d48829a27870b9f480df6 426 SUPERFAMILY SSF52540 197 373 2.07E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0422 f80702b72a9d48829a27870b9f480df6 426 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 361 2.4E-153 T 15-10-2018 IPR016496 GTPase HflX GO:0005525 XDD1_2506 f8cf576493dccd1fd9cbd1fb73199296 340 Gene3D G3DSA:3.40.718.10 1 339 1.7E-117 T 15-10-2018 XDD1_2506 f8cf576493dccd1fd9cbd1fb73199296 340 Pfam PF02504 Fatty acid synthesis protein 1 326 2.1E-109 T 15-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 XDD1_2506 f8cf576493dccd1fd9cbd1fb73199296 340 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 139.871 T 15-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 XDD1_2506 f8cf576493dccd1fd9cbd1fb73199296 340 PIRSF PIRSF002465 1 340 3.0E-118 T 15-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 XDD1_2506 f8cf576493dccd1fd9cbd1fb73199296 340 SUPERFAMILY SSF53659 1 336 2.1E-98 T 15-10-2018 XDD1_2506 f8cf576493dccd1fd9cbd1fb73199296 340 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 338 1.8E-122 T 15-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 XDD1_1725 d01224cfce0b63f8bdffaf681143a7e4 442 Pfam PF07690 Major Facilitator Superfamily 36 396 3.3E-45 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_1725 d01224cfce0b63f8bdffaf681143a7e4 442 Gene3D G3DSA:1.20.1250.20 237 439 4.8E-43 T 15-10-2018 XDD1_1725 d01224cfce0b63f8bdffaf681143a7e4 442 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 4.7E-134 T 15-10-2018 XDD1_1725 d01224cfce0b63f8bdffaf681143a7e4 442 SUPERFAMILY SSF103473 14 431 2.49E-79 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1725 d01224cfce0b63f8bdffaf681143a7e4 442 PIRSF PIRSF002808 7 442 2.5E-139 T 15-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 XDD1_1725 d01224cfce0b63f8bdffaf681143a7e4 442 Gene3D G3DSA:1.20.1250.20 19 223 2.1E-48 T 15-10-2018 XDD1_2560 d0c05fbf3e4d47d2330d7c067f0e2ba2 923 SMART SM00448 806 917 3.1E-35 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_2560 d0c05fbf3e4d47d2330d7c067f0e2ba2 923 Gene3D G3DSA:3.30.565.10 511 670 3.9E-42 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_2560 d0c05fbf3e4d47d2330d7c067f0e2ba2 923 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 1 922 25.72 T 15-10-2018 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021 XDD1_2560 d0c05fbf3e4d47d2330d7c067f0e2ba2 923 SMART SM00388 445 510 1.5E-20 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_2560 d0c05fbf3e4d47d2330d7c067f0e2ba2 923 Pfam PF00072 Response regulator receiver domain 808 916 1.5E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_2560 d0c05fbf3e4d47d2330d7c067f0e2ba2 923 SUPERFAMILY SSF47384 430 511 1.71E-20 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XDD1_2560 d0c05fbf3e4d47d2330d7c067f0e2ba2 923 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 685 774 3.7E-27 T 15-10-2018 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 XDD1_2560 d0c05fbf3e4d47d2330d7c067f0e2ba2 923 SMART SM00387 557 668 6.4E-36 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_2560 d0c05fbf3e4d47d2330d7c067f0e2ba2 923 SUPERFAMILY SSF52172 680 777 2.83E-21 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_2560 d0c05fbf3e4d47d2330d7c067f0e2ba2 923 SUPERFAMILY SSF55874 499 667 1.44E-42 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_2560 d0c05fbf3e4d47d2330d7c067f0e2ba2 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 665 2.0E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2560 d0c05fbf3e4d47d2330d7c067f0e2ba2 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 621 2.0E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2560 d0c05fbf3e4d47d2330d7c067f0e2ba2 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 646 2.0E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2560 d0c05fbf3e4d47d2330d7c067f0e2ba2 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 607 2.0E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2560 d0c05fbf3e4d47d2330d7c067f0e2ba2 923 Pfam PF00512 His Kinase A (phospho-acceptor) domain 446 509 6.6E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_2560 d0c05fbf3e4d47d2330d7c067f0e2ba2 923 SUPERFAMILY SSF52172 805 921 8.82E-36 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_2560 d0c05fbf3e4d47d2330d7c067f0e2ba2 923 Gene3D G3DSA:1.10.287.130 422 508 8.3E-24 T 15-10-2018 XDD1_2560 d0c05fbf3e4d47d2330d7c067f0e2ba2 923 Gene3D G3DSA:3.40.50.2300 801 922 5.7E-36 T 15-10-2018 XDD1_2560 d0c05fbf3e4d47d2330d7c067f0e2ba2 923 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 557 666 5.8E-25 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_1414 fcc7bb08f636a4effe80638021e5aaa0 493 SUPERFAMILY SSF52540 147 355 4.93E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1414 fcc7bb08f636a4effe80638021e5aaa0 493 Pfam PF00271 Helicase conserved C-terminal domain 239 339 1.6E-24 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_1414 fcc7bb08f636a4effe80638021e5aaa0 493 Pfam PF00270 DEAD/DEAH box helicase 25 197 2.7E-51 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XDD1_1414 fcc7bb08f636a4effe80638021e5aaa0 493 Gene3D G3DSA:3.40.50.300 214 434 3.5E-47 T 15-10-2018 XDD1_1414 fcc7bb08f636a4effe80638021e5aaa0 493 SMART SM00487 20 223 2.1E-63 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XDD1_1414 fcc7bb08f636a4effe80638021e5aaa0 493 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site XDD1_1414 fcc7bb08f636a4effe80638021e5aaa0 493 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 489 50.878 T 15-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 XDD1_1414 fcc7bb08f636a4effe80638021e5aaa0 493 SMART SM00490 259 340 1.1E-29 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_1414 fcc7bb08f636a4effe80638021e5aaa0 493 Gene3D G3DSA:3.40.50.300 1 212 1.8E-78 T 15-10-2018 XDD1_1414 fcc7bb08f636a4effe80638021e5aaa0 493 SUPERFAMILY SSF52540 1 209 2.83E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3759 0bf7928b3ff5592d24927d2d82bd9d5b 184 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 14 177 3.8E-42 T 15-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN XDD1_3759 0bf7928b3ff5592d24927d2d82bd9d5b 184 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 20 175 1.6E-38 T 15-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN XDD1_3759 0bf7928b3ff5592d24927d2d82bd9d5b 184 Gene3D G3DSA:2.60.40.4150 47 183 1.4E-32 T 15-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily XDD1_2788 83bf253bef546565b6829fe157e61c49 164 Gene3D G3DSA:1.10.10.10 1 144 2.1E-56 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2788 83bf253bef546565b6829fe157e61c49 164 SUPERFAMILY SSF46785 2 133 5.45E-36 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_2788 83bf253bef546565b6829fe157e61c49 164 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 8.0E-67 T 15-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 XDD1_2788 83bf253bef546565b6829fe157e61c49 164 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 164 47.766 T 15-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 XDD1_2788 83bf253bef546565b6829fe157e61c49 164 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 2.5E-47 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type XDD1_2788 83bf253bef546565b6829fe157e61c49 164 Pfam PF02082 Transcriptional regulator 1 83 3.7E-27 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type XDD1_2788 83bf253bef546565b6829fe157e61c49 164 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 15-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site XDD1_2595 18ae94d69abb3f9dac7be939d0c0efc8 153 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 27 123 4.2E-31 T 15-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2595 18ae94d69abb3f9dac7be939d0c0efc8 153 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 19.94 T 15-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 XDD1_2595 18ae94d69abb3f9dac7be939d0c0efc8 153 Gene3D G3DSA:1.20.58.1610 1 124 2.1E-42 T 15-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_3008 d2d5e5ab2a444be69c034bfe50ee0dea 134 Gene3D G3DSA:3.90.79.10 3 130 2.1E-38 T 15-10-2018 XDD1_3008 d2d5e5ab2a444be69c034bfe50ee0dea 134 PRINTS PR00502 NUDIX hydrolase family signature 49 64 2.7E-10 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 XDD1_3008 d2d5e5ab2a444be69c034bfe50ee0dea 134 PRINTS PR00502 NUDIX hydrolase family signature 35 49 2.7E-10 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 XDD1_3008 d2d5e5ab2a444be69c034bfe50ee0dea 134 SUPERFAMILY SSF55811 2 128 5.96E-37 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XDD1_3008 d2d5e5ab2a444be69c034bfe50ee0dea 134 PRINTS PR01401 Mutator MutT protein signature 4 25 1.8E-12 T 15-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 XDD1_3008 d2d5e5ab2a444be69c034bfe50ee0dea 134 PRINTS PR01401 Mutator MutT protein signature 79 92 1.8E-12 T 15-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 XDD1_3008 d2d5e5ab2a444be69c034bfe50ee0dea 134 TIGRFAM TIGR00586 mutt: mutator mutT protein 3 128 1.0E-51 T 15-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 XDD1_3008 d2d5e5ab2a444be69c034bfe50ee0dea 134 Pfam PF00293 NUDIX domain 6 123 1.5E-20 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XDD1_3008 d2d5e5ab2a444be69c034bfe50ee0dea 134 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XDD1_2258 f3644a5eaa09cbcdf870df74659a0b53 237 SUPERFAMILY SSF48008 79 228 2.35E-66 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal XDD1_2258 f3644a5eaa09cbcdf870df74659a0b53 237 Pfam PF07840 FadR C-terminal domain 72 233 1.7E-74 T 15-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 XDD1_2258 f3644a5eaa09cbcdf870df74659a0b53 237 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 235 9.9E-124 T 15-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 XDD1_2258 f3644a5eaa09cbcdf870df74659a0b53 237 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 237 159.393 T 15-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 XDD1_2258 f3644a5eaa09cbcdf870df74659a0b53 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_2258 f3644a5eaa09cbcdf870df74659a0b53 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_2258 f3644a5eaa09cbcdf870df74659a0b53 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 71 3.7E-20 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_2258 f3644a5eaa09cbcdf870df74659a0b53 237 Gene3D G3DSA:1.10.10.10 1 79 5.1E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2258 f3644a5eaa09cbcdf870df74659a0b53 237 SUPERFAMILY SSF46785 9 88 1.61E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_2258 f3644a5eaa09cbcdf870df74659a0b53 237 SMART SM00345 12 71 1.0E-22 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_2258 f3644a5eaa09cbcdf870df74659a0b53 237 Gene3D G3DSA:1.20.120.530 80 237 1.2E-41 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal XDD1_0351 f405714f410d20826e876105e3bf6b0a 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 7.7E-158 T 15-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 XDD1_0351 f405714f410d20826e876105e3bf6b0a 293 Pfam PF00483 Nucleotidyl transferase 2 238 6.4E-72 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 XDD1_0351 f405714f410d20826e876105e3bf6b0a 293 Gene3D G3DSA:3.90.550.10 1 292 7.9E-87 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_0351 f405714f410d20826e876105e3bf6b0a 293 SUPERFAMILY SSF53448 1 286 4.96E-93 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_1785 60c8d290a2d40fb8e3934ddc0c2e0447 131 Pfam PF00892 EamA-like transporter family 33 123 2.0E-7 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_1785 60c8d290a2d40fb8e3934ddc0c2e0447 131 Gene3D G3DSA:1.10.3730.20 43 131 1.5E-6 T 15-10-2018 XDD1_1785 60c8d290a2d40fb8e3934ddc0c2e0447 131 SUPERFAMILY SSF103481 36 129 1.83E-14 T 15-10-2018 XDD1_1785 60c8d290a2d40fb8e3934ddc0c2e0447 131 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 2 128 23.009 T 15-10-2018 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF XDD1_0754 74bccae142f17c1ac96ce58bfe57725e 314 SMART SM00904 183 307 9.4E-61 T 15-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 XDD1_0754 74bccae142f17c1ac96ce58bfe57725e 314 PIRSF PIRSF004491 1 313 7.3E-105 T 15-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 XDD1_0754 74bccae142f17c1ac96ce58bfe57725e 314 SUPERFAMILY SSF52374 15 175 7.6E-36 T 15-10-2018 XDD1_0754 74bccae142f17c1ac96ce58bfe57725e 314 Pfam PF06574 FAD synthetase 12 167 5.8E-57 T 15-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 XDD1_0754 74bccae142f17c1ac96ce58bfe57725e 314 SUPERFAMILY SSF82114 174 307 1.46E-44 T 15-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 XDD1_0754 74bccae142f17c1ac96ce58bfe57725e 314 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 1.7E-112 T 15-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 XDD1_0754 74bccae142f17c1ac96ce58bfe57725e 314 Gene3D G3DSA:3.40.50.620 1 185 6.2E-61 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_0754 74bccae142f17c1ac96ce58bfe57725e 314 Pfam PF01687 Riboflavin kinase 184 306 9.6E-39 T 15-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 XDD1_0754 74bccae142f17c1ac96ce58bfe57725e 314 Gene3D G3DSA:2.40.30.30 186 313 5.3E-40 T 15-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 XDD1_2949 ca1864345a63961c868ccec3def7bbf2 456 SUPERFAMILY SSF116734 7 219 6.05E-37 T 15-10-2018 XDD1_2949 ca1864345a63961c868ccec3def7bbf2 456 Pfam PF01420 Type I restriction modification DNA specificity domain 25 198 1.0E-5 T 15-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 XDD1_2949 ca1864345a63961c868ccec3def7bbf2 456 Pfam PF01420 Type I restriction modification DNA specificity domain 267 403 6.1E-9 T 15-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 XDD1_2949 ca1864345a63961c868ccec3def7bbf2 456 Gene3D G3DSA:3.90.220.20 238 385 6.5E-74 T 15-10-2018 XDD1_2949 ca1864345a63961c868ccec3def7bbf2 456 Gene3D G3DSA:3.90.220.20 19 436 6.5E-74 T 15-10-2018 XDD1_2949 ca1864345a63961c868ccec3def7bbf2 456 SUPERFAMILY SSF116734 218 440 2.78E-41 T 15-10-2018 XDD1_2949 ca1864345a63961c868ccec3def7bbf2 456 Gene3D G3DSA:1.10.287.1120 166 432 6.5E-74 T 15-10-2018 XDD1_3449 475aa4dc5afde92d4c52049dfc3feafd 770 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 161 475 4.4E-116 T 15-10-2018 IPR008766 Replication gene A protein GO:0006260 XDD1_0219 1842dabd3572d4b5640b617033d4e9e2 460 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 8.3E-69 T 15-10-2018 XDD1_0219 1842dabd3572d4b5640b617033d4e9e2 460 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 8.3E-69 T 15-10-2018 XDD1_0219 1842dabd3572d4b5640b617033d4e9e2 460 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 8.3E-69 T 15-10-2018 XDD1_0219 1842dabd3572d4b5640b617033d4e9e2 460 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 8.3E-69 T 15-10-2018 XDD1_0219 1842dabd3572d4b5640b617033d4e9e2 460 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 8.3E-69 T 15-10-2018 XDD1_0219 1842dabd3572d4b5640b617033d4e9e2 460 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 8.3E-69 T 15-10-2018 XDD1_0219 1842dabd3572d4b5640b617033d4e9e2 460 SUPERFAMILY SSF48557 3 456 1.3E-141 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 XDD1_0219 1842dabd3572d4b5640b617033d4e9e2 460 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 1.0E-28 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_0219 1842dabd3572d4b5640b617033d4e9e2 460 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 1.0E-28 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_0219 1842dabd3572d4b5640b617033d4e9e2 460 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 1.0E-28 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_0219 1842dabd3572d4b5640b617033d4e9e2 460 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 1.0E-28 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_0219 1842dabd3572d4b5640b617033d4e9e2 460 Gene3D G3DSA:1.10.40.30 363 433 5.8E-149 T 15-10-2018 XDD1_0219 1842dabd3572d4b5640b617033d4e9e2 460 Gene3D G3DSA:1.20.200.10 108 446 5.8E-149 T 15-10-2018 XDD1_0219 1842dabd3572d4b5640b617033d4e9e2 460 Gene3D G3DSA:1.10.275.10 1 107 7.1E-38 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal XDD1_0219 1842dabd3572d4b5640b617033d4e9e2 460 Pfam PF00206 Lyase 6 301 2.1E-97 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal XDD1_0219 1842dabd3572d4b5640b617033d4e9e2 460 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.303 T 15-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XDD1_0219 1842dabd3572d4b5640b617033d4e9e2 460 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 XDD1_0219 1842dabd3572d4b5640b617033d4e9e2 460 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.4E-23 T 15-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XDD1_0219 1842dabd3572d4b5640b617033d4e9e2 460 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 455 3.0E-212 T 15-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XDD1_0446 bdc361a49988d8451905b981c20ceb32 580 Pfam PF01103 Surface antigen 270 578 1.1E-29 T 15-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 XDD1_0446 bdc361a49988d8451905b981c20ceb32 580 Gene3D G3DSA:3.10.20.310 21 101 2.3E-27 T 15-10-2018 XDD1_0446 bdc361a49988d8451905b981c20ceb32 580 Gene3D G3DSA:3.10.20.310 102 189 1.6E-30 T 15-10-2018 XDD1_0446 bdc361a49988d8451905b981c20ceb32 580 Gene3D G3DSA:2.40.160.50 270 580 4.7E-113 T 15-10-2018 XDD1_0446 bdc361a49988d8451905b981c20ceb32 580 Pfam PF07244 Surface antigen variable number repeat 190 248 5.0E-6 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 XDD1_0446 bdc361a49988d8451905b981c20ceb32 580 Gene3D G3DSA:3.10.20.310 190 269 1.3E-21 T 15-10-2018 XDD1_0446 bdc361a49988d8451905b981c20ceb32 580 Pfam PF17243 POTRA domain TamA domain 1 26 99 7.1E-18 T 15-10-2018 IPR035243 TamA, POTRA domain 1 XDD1_3089 32fe61e1c9e8b4558a29752a86f1a396 117 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 6 110 1.5E-17 T 15-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family XDD1_3089 32fe61e1c9e8b4558a29752a86f1a396 117 Pfam PF05119 Phage terminase, small subunit 15 109 2.4E-19 T 15-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family XDD1_0283 bbc3a3a4fa5730c87b0c4e1af183ea16 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 1.4E-131 T 15-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 XDD1_0283 bbc3a3a4fa5730c87b0c4e1af183ea16 274 SUPERFAMILY SSF50104 127 269 1.44E-60 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily XDD1_0283 bbc3a3a4fa5730c87b0c4e1af183ea16 274 Gene3D G3DSA:2.30.30.30 115 195 3.9E-34 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 XDD1_0283 bbc3a3a4fa5730c87b0c4e1af183ea16 274 SMART SM01382 124 251 8.5E-92 T 15-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 XDD1_0283 bbc3a3a4fa5730c87b0c4e1af183ea16 274 Gene3D G3DSA:4.10.950.10 196 273 1.5E-36 T 15-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0283 bbc3a3a4fa5730c87b0c4e1af183ea16 274 SMART SM01383 42 118 2.2E-48 T 15-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0283 bbc3a3a4fa5730c87b0c4e1af183ea16 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.6E-34 T 15-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0283 bbc3a3a4fa5730c87b0c4e1af183ea16 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 2.0E-56 T 15-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 XDD1_0283 bbc3a3a4fa5730c87b0c4e1af183ea16 274 PIRSF PIRSF002158 12 274 1.2E-101 T 15-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0283 bbc3a3a4fa5730c87b0c4e1af183ea16 274 Gene3D G3DSA:2.40.50.140 1 114 1.5E-51 T 15-10-2018 XDD1_0283 bbc3a3a4fa5730c87b0c4e1af183ea16 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.311 T 15-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 XDD1_0283 bbc3a3a4fa5730c87b0c4e1af183ea16 274 SUPERFAMILY SSF50249 2 125 3.77E-50 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_0283 bbc3a3a4fa5730c87b0c4e1af183ea16 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 15-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_1998 2e671306e4e9eb79b158984efa90cbe6 659 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 28 356 3.6E-12 T 15-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 XDD1_1998 2e671306e4e9eb79b158984efa90cbe6 659 Gene3D G3DSA:2.40.128.130 374 659 2.0E-51 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily XDD1_1998 2e671306e4e9eb79b158984efa90cbe6 659 Gene3D G3DSA:3.40.50.1110 16 214 3.5E-31 T 15-10-2018 IPR036514 SGNH hydrolase superfamily XDD1_1998 2e671306e4e9eb79b158984efa90cbe6 659 Gene3D G3DSA:3.40.50.1110 254 368 2.4E-22 T 15-10-2018 IPR036514 SGNH hydrolase superfamily XDD1_1998 2e671306e4e9eb79b158984efa90cbe6 659 SUPERFAMILY SSF103515 396 659 3.27E-38 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily XDD1_1998 2e671306e4e9eb79b158984efa90cbe6 659 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 28 39 - T 15-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 XDD1_1998 2e671306e4e9eb79b158984efa90cbe6 659 SMART SM00869 396 647 8.3E-22 T 15-10-2018 IPR005546 Autotransporter beta-domain XDD1_1998 2e671306e4e9eb79b158984efa90cbe6 659 SUPERFAMILY SSF52266 27 360 3.53E-11 T 15-10-2018 XDD1_1998 2e671306e4e9eb79b158984efa90cbe6 659 Pfam PF03797 Autotransporter beta-domain 400 636 3.1E-37 T 15-10-2018 IPR005546 Autotransporter beta-domain XDD1_1998 2e671306e4e9eb79b158984efa90cbe6 659 PIRSF PIRSF037375 1 659 4.6E-174 T 15-10-2018 IPR017186 Lipase, autotransporter EstA XDD1_0352 6880e687b0af2c9325f307dcee7f50ca 236 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 44 230 6.2E-82 T 15-10-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 MetaCyc: PWY-7315 XDD1_0352 6880e687b0af2c9325f307dcee7f50ca 236 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 44 230 44.77 T 15-10-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 MetaCyc: PWY-7315 XDD1_0352 6880e687b0af2c9325f307dcee7f50ca 236 SUPERFAMILY SSF55729 52 225 1.56E-23 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_0352 6880e687b0af2c9325f307dcee7f50ca 236 Pfam PF00583 Acetyltransferase (GNAT) family 134 218 5.1E-13 T 15-10-2018 IPR000182 GNAT domain XDD1_0352 6880e687b0af2c9325f307dcee7f50ca 236 Gene3D G3DSA:3.40.630.30 1 230 1.6E-69 T 15-10-2018 XDD1_2152 127b30ea53e673b816c8cbf366b8488b 128 Pfam PF11162 Protein of unknown function (DUF2946) 23 126 4.7E-16 T 15-10-2018 IPR021333 Protein of unknown function DUF2946 XDD1_0618 d9a81a0a2daea33d5c455eb71db91e1e 257 Gene3D G3DSA:1.10.530.10 121 246 1.8E-14 T 15-10-2018 XDD1_0618 d9a81a0a2daea33d5c455eb71db91e1e 257 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 122 226 1.1E-15 T 15-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 XDD1_0618 d9a81a0a2daea33d5c455eb71db91e1e 257 SMART SM00047 108 234 1.1E-8 T 15-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 XDD1_3375 fc2191d17ec8d7dda26c5d4108180c82 339 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 30 333 3.1E-136 T 15-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 XDD1_3375 fc2191d17ec8d7dda26c5d4108180c82 339 Gene3D G3DSA:3.40.190.10 135 334 2.0E-116 T 15-10-2018 XDD1_3375 fc2191d17ec8d7dda26c5d4108180c82 339 Gene3D G3DSA:3.40.190.10 35 309 2.0E-116 T 15-10-2018 XDD1_3375 fc2191d17ec8d7dda26c5d4108180c82 339 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 21 339 1.4E-150 T 15-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 XDD1_3375 fc2191d17ec8d7dda26c5d4108180c82 339 Pfam PF13343 Bacterial extracellular solute-binding protein 87 310 2.2E-20 T 15-10-2018 XDD1_3375 fc2191d17ec8d7dda26c5d4108180c82 339 SUPERFAMILY SSF53850 33 334 9.37E-67 T 15-10-2018 XDD1_0307 957b6155c08f39b48f64a355654d7b87 137 SMART SM00422 2 71 1.3E-30 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XDD1_0307 957b6155c08f39b48f64a355654d7b87 137 SUPERFAMILY SSF46955 2 121 9.89E-35 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily XDD1_0307 957b6155c08f39b48f64a355654d7b87 137 Pfam PF13411 MerR HTH family regulatory protein 2 68 5.7E-23 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XDD1_0307 957b6155c08f39b48f64a355654d7b87 137 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XDD1_0307 957b6155c08f39b48f64a355654d7b87 137 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 5.5E-63 T 15-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 XDD1_0307 957b6155c08f39b48f64a355654d7b87 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 1.1E-14 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XDD1_0307 957b6155c08f39b48f64a355654d7b87 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 1.1E-14 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XDD1_0307 957b6155c08f39b48f64a355654d7b87 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.1E-14 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XDD1_0307 957b6155c08f39b48f64a355654d7b87 137 Gene3D G3DSA:1.10.1660.10 1 128 5.7E-37 T 15-10-2018 XDD1_1779 c0c8324656eb7e5bbf3b9f641542fae9 381 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 373 1.4E-126 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase XDD1_1779 c0c8324656eb7e5bbf3b9f641542fae9 381 Gene3D G3DSA:3.90.1150.10 253 381 3.3E-37 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_1779 c0c8324656eb7e5bbf3b9f641542fae9 381 Gene3D G3DSA:3.40.640.10 1 252 9.8E-94 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_1779 c0c8324656eb7e5bbf3b9f641542fae9 381 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 379 70.071 T 15-10-2018 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87 XDD1_1779 c0c8324656eb7e5bbf3b9f641542fae9 381 PIRSF PIRSF000390 1 381 2.8E-112 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase XDD1_1779 c0c8324656eb7e5bbf3b9f641542fae9 381 SUPERFAMILY SSF53383 4 377 2.42E-111 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_1239 c9dbdeeae38ab8d657cc85e0701d1030 336 SUPERFAMILY SSF81345 5 323 1.7E-71 T 15-10-2018 IPR037294 ABC transporter, BtuC-like XDD1_1239 c9dbdeeae38ab8d657cc85e0701d1030 336 Gene3D G3DSA:1.10.3470.10 7 333 4.3E-87 T 15-10-2018 IPR037294 ABC transporter, BtuC-like XDD1_1239 c9dbdeeae38ab8d657cc85e0701d1030 336 Pfam PF01032 FecCD transport family 21 325 2.1E-82 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 XDD1_3134 1ab8069782a639dcb22fe31237ca63ab 433 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 41 56 - T 15-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site XDD1_3134 1ab8069782a639dcb22fe31237ca63ab 433 Pfam PF00375 Sodium:dicarboxylate symporter family 14 406 3.4E-108 T 15-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 XDD1_3134 1ab8069782a639dcb22fe31237ca63ab 433 Gene3D G3DSA:1.10.3860.10 1 423 7.8E-122 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XDD1_3134 1ab8069782a639dcb22fe31237ca63ab 433 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 300 323 - T 15-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site XDD1_3134 1ab8069782a639dcb22fe31237ca63ab 433 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 2.0E-31 T 15-10-2018 XDD1_3134 1ab8069782a639dcb22fe31237ca63ab 433 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 2.0E-31 T 15-10-2018 XDD1_3134 1ab8069782a639dcb22fe31237ca63ab 433 PRINTS PR00173 Glutamate-aspartate symporter signature 79 104 2.0E-31 T 15-10-2018 XDD1_3134 1ab8069782a639dcb22fe31237ca63ab 433 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 2.0E-31 T 15-10-2018 XDD1_3134 1ab8069782a639dcb22fe31237ca63ab 433 PRINTS PR00173 Glutamate-aspartate symporter signature 49 69 2.0E-31 T 15-10-2018 XDD1_3134 1ab8069782a639dcb22fe31237ca63ab 433 PRINTS PR00173 Glutamate-aspartate symporter signature 150 172 2.0E-31 T 15-10-2018 XDD1_3134 1ab8069782a639dcb22fe31237ca63ab 433 SUPERFAMILY SSF118215 14 407 3.92E-118 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XDD1_3134 1ab8069782a639dcb22fe31237ca63ab 433 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 7 433 37.279 T 15-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 XDD1_1360 c8d5e85b33cd83a1a307d49f0aa26f74 250 SUPERFAMILY SSF53254 4 247 6.02E-78 T 15-10-2018 IPR029033 Histidine phosphatase superfamily XDD1_1360 c8d5e85b33cd83a1a307d49f0aa26f74 250 SMART SM00855 5 191 2.9E-29 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XDD1_1360 c8d5e85b33cd83a1a307d49f0aa26f74 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 15-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 XDD1_1360 c8d5e85b33cd83a1a307d49f0aa26f74 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 130 225 1.1E-6 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XDD1_1360 c8d5e85b33cd83a1a307d49f0aa26f74 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 124 2.0E-30 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XDD1_1360 c8d5e85b33cd83a1a307d49f0aa26f74 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.084 T 15-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 XDD1_1360 c8d5e85b33cd83a1a307d49f0aa26f74 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 1.7E-128 T 15-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 XDD1_1360 c8d5e85b33cd83a1a307d49f0aa26f74 250 Gene3D G3DSA:3.40.50.1240 2 250 5.7E-94 T 15-10-2018 IPR029033 Histidine phosphatase superfamily XDD1_1360 c8d5e85b33cd83a1a307d49f0aa26f74 250 PIRSF PIRSF000709 149 240 0.021 T 15-10-2018 XDD1_1360 c8d5e85b33cd83a1a307d49f0aa26f74 250 PIRSF PIRSF000709 3 113 5.6E-9 T 15-10-2018 XDD1_0282 2f72bf59d098ddebdde9c50e45e4ceaa 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 15-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0282 2f72bf59d098ddebdde9c50e45e4ceaa 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.928 T 15-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 XDD1_0282 2f72bf59d098ddebdde9c50e45e4ceaa 100 SUPERFAMILY SSF54189 3 92 5.04E-31 T 15-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0282 2f72bf59d098ddebdde9c50e45e4ceaa 100 Pfam PF00276 Ribosomal protein L23 9 95 1.0E-31 T 15-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 XDD1_0282 2f72bf59d098ddebdde9c50e45e4ceaa 100 Gene3D G3DSA:3.30.70.330 1 100 5.2E-39 T 15-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily XDD1_0156 c50f583270bb7ed6ed4c2fbe82a9740e 158 SUPERFAMILY SSF54611 12 144 5.23E-51 T 15-10-2018 IPR035958 SecB-like superfamily XDD1_0156 c50f583270bb7ed6ed4c2fbe82a9740e 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 8.8E-41 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XDD1_0156 c50f583270bb7ed6ed4c2fbe82a9740e 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 8.8E-41 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XDD1_0156 c50f583270bb7ed6ed4c2fbe82a9740e 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 8.8E-41 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XDD1_0156 c50f583270bb7ed6ed4c2fbe82a9740e 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 8.8E-41 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XDD1_0156 c50f583270bb7ed6ed4c2fbe82a9740e 158 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 7 148 1.2E-66 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XDD1_0156 c50f583270bb7ed6ed4c2fbe82a9740e 158 Hamap MF_00821 Protein-export protein SecB [secB]. 3 147 32.702 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XDD1_0156 c50f583270bb7ed6ed4c2fbe82a9740e 158 Gene3D G3DSA:3.10.420.10 3 155 3.0E-60 T 15-10-2018 IPR035958 SecB-like superfamily XDD1_0156 c50f583270bb7ed6ed4c2fbe82a9740e 158 Pfam PF02556 Preprotein translocase subunit SecB 7 146 1.0E-55 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XDD1_2136 3c31bd8f0106dd490e384f59df5b1918 294 SUPERFAMILY SSF102114 40 220 2.49E-15 T 15-10-2018 XDD1_2136 3c31bd8f0106dd490e384f59df5b1918 294 Pfam PF04055 Radical SAM superfamily 47 215 4.1E-13 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XDD1_2136 3c31bd8f0106dd490e384f59df5b1918 294 Gene3D G3DSA:3.20.20.70 1 271 1.3E-60 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_2510 b64f6579e33500b53fe182a8dfd67928 318 Pfam PF00849 RNA pseudouridylate synthase 101 248 2.5E-29 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_2510 b64f6579e33500b53fe182a8dfd67928 318 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 314 5.4E-93 T 15-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_2510 b64f6579e33500b53fe182a8dfd67928 318 Pfam PF01479 S4 domain 20 66 6.8E-9 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_2510 b64f6579e33500b53fe182a8dfd67928 318 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_2510 b64f6579e33500b53fe182a8dfd67928 318 Gene3D G3DSA:3.10.290.10 4 73 1.8E-16 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XDD1_2510 b64f6579e33500b53fe182a8dfd67928 318 SUPERFAMILY SSF55120 95 314 9.12E-66 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_2510 b64f6579e33500b53fe182a8dfd67928 318 SUPERFAMILY SSF55174 19 70 5.18E-8 T 15-10-2018 XDD1_2510 b64f6579e33500b53fe182a8dfd67928 318 SMART SM00363 20 79 1.7E-7 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_2510 b64f6579e33500b53fe182a8dfd67928 318 Gene3D G3DSA:3.30.2350.10 92 317 2.3E-86 T 15-10-2018 XDD1_0903 bfbe4612f3e5dd6efff07740b9459986 183 SUPERFAMILY SSF53271 14 180 2.56E-51 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like XDD1_0903 bfbe4612f3e5dd6efff07740b9459986 183 Gene3D G3DSA:3.40.50.2020 1 183 8.6E-68 T 15-10-2018 XDD1_0903 bfbe4612f3e5dd6efff07740b9459986 183 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 179 2.5E-71 T 15-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 XDD1_0903 bfbe4612f3e5dd6efff07740b9459986 183 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 180 37.659 T 15-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 XDD1_0903 bfbe4612f3e5dd6efff07740b9459986 183 Pfam PF00156 Phosphoribosyl transferase domain 32 160 1.3E-16 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 XDD1_0952 28325d73b8165119e03beafb73b1437c 109 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 19 68 5.0E-15 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 XDD1_0182 c4de4cee3d19d9e3bf735ae363352f1f 325 Gene3D G3DSA:3.40.50.450 7 292 8.1E-117 T 15-10-2018 XDD1_0182 c4de4cee3d19d9e3bf735ae363352f1f 325 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 7 305 8.3E-125 T 15-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 XDD1_0182 c4de4cee3d19d9e3bf735ae363352f1f 325 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 5 325 45.419 T 15-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 XDD1_0182 c4de4cee3d19d9e3bf735ae363352f1f 325 Pfam PF00365 Phosphofructokinase 7 281 2.0E-106 T 15-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XDD1_0182 c4de4cee3d19d9e3bf735ae363352f1f 325 PIRSF PIRSF000532 4 325 7.3E-128 T 15-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 XDD1_0182 c4de4cee3d19d9e3bf735ae363352f1f 325 SUPERFAMILY SSF53784 3 317 6.15E-113 T 15-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XDD1_0182 c4de4cee3d19d9e3bf735ae363352f1f 325 Gene3D G3DSA:3.40.50.460 146 257 8.1E-117 T 15-10-2018 XDD1_0182 c4de4cee3d19d9e3bf735ae363352f1f 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 162 178 8.1E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XDD1_0182 c4de4cee3d19d9e3bf735ae363352f1f 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 142 160 8.1E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XDD1_0182 c4de4cee3d19d9e3bf735ae363352f1f 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 10 29 8.1E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XDD1_0182 c4de4cee3d19d9e3bf735ae363352f1f 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 180 197 8.1E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XDD1_0182 c4de4cee3d19d9e3bf735ae363352f1f 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 97 113 8.1E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XDD1_0182 c4de4cee3d19d9e3bf735ae363352f1f 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 35 48 8.1E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XDD1_0182 c4de4cee3d19d9e3bf735ae363352f1f 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 124 141 8.1E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XDD1_0182 c4de4cee3d19d9e3bf735ae363352f1f 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 218 230 8.1E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XDD1_0182 c4de4cee3d19d9e3bf735ae363352f1f 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 245 267 8.1E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XDD1_0182 c4de4cee3d19d9e3bf735ae363352f1f 325 ProSitePatterns PS00433 Phosphofructokinase signature. 249 267 - T 15-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XDD1_3105 ea212a1a825eb1a33c6ad9b39b199af2 509 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 259 318 5.1E-20 T 15-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 XDD1_3105 ea212a1a825eb1a33c6ad9b39b199af2 509 Pfam PF12626 Polymerase A arginine-rich C-terminus 377 493 3.2E-43 T 15-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain XDD1_3105 ea212a1a825eb1a33c6ad9b39b199af2 509 Pfam PF01743 Poly A polymerase head domain 100 232 3.0E-38 T 15-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 XDD1_3105 ea212a1a825eb1a33c6ad9b39b199af2 509 SUPERFAMILY SSF81891 230 469 1.57E-52 T 15-10-2018 XDD1_3105 ea212a1a825eb1a33c6ad9b39b199af2 509 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 63 493 38.282 T 15-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 XDD1_3105 ea212a1a825eb1a33c6ad9b39b199af2 509 Gene3D G3DSA:3.30.460.10 66 229 6.0E-63 T 15-10-2018 XDD1_3105 ea212a1a825eb1a33c6ad9b39b199af2 509 Gene3D G3DSA:1.10.3090.10 230 481 8.1E-102 T 15-10-2018 XDD1_3105 ea212a1a825eb1a33c6ad9b39b199af2 509 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 69 481 4.7E-159 T 15-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 XDD1_3105 ea212a1a825eb1a33c6ad9b39b199af2 509 SUPERFAMILY SSF81301 71 228 6.65E-39 T 15-10-2018 XDD1_0484 cde582a58a5e7ccfed3b975e5f3c33ce 644 SMART SM00490 260 341 2.8E-32 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_0484 cde582a58a5e7ccfed3b975e5f3c33ce 644 Gene3D G3DSA:3.40.50.300 215 432 1.6E-49 T 15-10-2018 XDD1_0484 cde582a58a5e7ccfed3b975e5f3c33ce 644 Pfam PF00271 Helicase conserved C-terminal domain 233 341 3.9E-29 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_0484 cde582a58a5e7ccfed3b975e5f3c33ce 644 SMART SM00487 26 224 2.4E-65 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XDD1_0484 cde582a58a5e7ccfed3b975e5f3c33ce 644 SUPERFAMILY SSF52540 5 210 7.57E-74 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0484 cde582a58a5e7ccfed3b975e5f3c33ce 644 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 2 566 47.275 T 15-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 XDD1_0484 cde582a58a5e7ccfed3b975e5f3c33ce 644 Gene3D G3DSA:3.40.50.300 2 213 9.0E-78 T 15-10-2018 XDD1_0484 cde582a58a5e7ccfed3b975e5f3c33ce 644 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site XDD1_0484 cde582a58a5e7ccfed3b975e5f3c33ce 644 Pfam PF03880 DbpA RNA binding domain 495 564 1.1E-19 T 15-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain XDD1_0484 cde582a58a5e7ccfed3b975e5f3c33ce 644 Gene3D G3DSA:3.30.70.330 492 566 2.0E-9 T 15-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily XDD1_0484 cde582a58a5e7ccfed3b975e5f3c33ce 644 Pfam PF00270 DEAD/DEAH box helicase 32 196 4.8E-51 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XDD1_0484 cde582a58a5e7ccfed3b975e5f3c33ce 644 SUPERFAMILY SSF52540 148 355 5.79E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3816 bcd20f8862ff0b7f25a29cb40613472d 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 4.4E-5 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_3816 bcd20f8862ff0b7f25a29cb40613472d 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 4.4E-5 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_3816 bcd20f8862ff0b7f25a29cb40613472d 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 4.4E-5 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_3816 bcd20f8862ff0b7f25a29cb40613472d 205 Gene3D G3DSA:1.10.150.240 16 81 1.6E-60 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 XDD1_3816 bcd20f8862ff0b7f25a29cb40613472d 205 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 184 2.6E-16 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_3816 bcd20f8862ff0b7f25a29cb40613472d 205 SUPERFAMILY SSF56784 3 192 7.5E-40 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_3816 bcd20f8862ff0b7f25a29cb40613472d 205 Gene3D G3DSA:3.40.50.1000 4 182 1.6E-60 T 15-10-2018 IPR023214 HAD superfamily XDD1_3816 bcd20f8862ff0b7f25a29cb40613472d 205 Pfam PF13419 Haloacid dehalogenase-like hydrolase 48 184 1.0E-12 T 15-10-2018 XDD1_3344 18c657475931f4aba700a8fb893cc7dd 244 SUPERFAMILY SSF51735 6 243 6.82E-77 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_3344 18c657475931f4aba700a8fb893cc7dd 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 5.2E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3344 18c657475931f4aba700a8fb893cc7dd 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 5.2E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3344 18c657475931f4aba700a8fb893cc7dd 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 5.2E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3344 18c657475931f4aba700a8fb893cc7dd 244 Gene3D G3DSA:3.40.50.720 1 244 3.3E-77 T 15-10-2018 XDD1_3344 18c657475931f4aba700a8fb893cc7dd 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 242 4.9E-64 T 15-10-2018 XDD1_3344 18c657475931f4aba700a8fb893cc7dd 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.3E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3344 18c657475931f4aba700a8fb893cc7dd 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.3E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3344 18c657475931f4aba700a8fb893cc7dd 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.3E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3344 18c657475931f4aba700a8fb893cc7dd 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.3E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3344 18c657475931f4aba700a8fb893cc7dd 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.3E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3344 18c657475931f4aba700a8fb893cc7dd 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.3E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_1774 a8d785e3d8484e45a3fff47a62da1816 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.1E-23 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XDD1_1774 a8d785e3d8484e45a3fff47a62da1816 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.1E-23 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XDD1_1774 a8d785e3d8484e45a3fff47a62da1816 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.1E-23 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XDD1_1774 a8d785e3d8484e45a3fff47a62da1816 65 SUPERFAMILY SSF143034 2 64 1.57E-23 T 15-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1774 a8d785e3d8484e45a3fff47a62da1816 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 2.6E-27 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XDD1_1774 a8d785e3d8484e45a3fff47a62da1816 65 Gene3D G3DSA:2.40.50.530 1 65 4.9E-20 T 15-10-2018 XDD1_1774 a8d785e3d8484e45a3fff47a62da1816 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.368 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XDD1_1774 a8d785e3d8484e45a3fff47a62da1816 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 15-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_1774 a8d785e3d8484e45a3fff47a62da1816 65 Pfam PF01632 Ribosomal protein L35 2 60 3.5E-24 T 15-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_2250 fde311311af212b54929bf290ba85ddc 625 SUPERFAMILY SSF52096 326 537 1.45E-40 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XDD1_2250 fde311311af212b54929bf290ba85ddc 625 Gene3D G3DSA:3.40.1750.10 189 505 2.4E-157 T 15-10-2018 XDD1_2250 fde311311af212b54929bf290ba85ddc 625 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 331 548 4.6E-50 T 15-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 XDD1_2250 fde311311af212b54929bf290ba85ddc 625 PIRSF PIRSF001217 8 625 1.9E-208 T 15-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 XDD1_2250 fde311311af212b54929bf290ba85ddc 625 Pfam PF01343 Peptidase family S49 141 289 1.0E-35 T 15-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 XDD1_2250 fde311311af212b54929bf290ba85ddc 625 Pfam PF01343 Peptidase family S49 402 550 7.7E-43 T 15-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 XDD1_2250 fde311311af212b54929bf290ba85ddc 625 Gene3D G3DSA:3.90.226.10 319 547 2.4E-157 T 15-10-2018 XDD1_2250 fde311311af212b54929bf290ba85ddc 625 SUPERFAMILY SSF52096 32 286 7.85E-26 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XDD1_2250 fde311311af212b54929bf290ba85ddc 625 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 615 3.2E-203 T 15-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 XDD1_2250 fde311311af212b54929bf290ba85ddc 625 Gene3D G3DSA:3.90.226.10 97 318 2.4E-157 T 15-10-2018 XDD1_3020 dd6480c0930f1152059b5040724c4c19 441 SUPERFAMILY SSF51984 8 99 7.06E-23 T 15-10-2018 XDD1_3020 dd6480c0930f1152059b5040724c4c19 441 Pfam PF02875 Mur ligase family, glutamate ligase domain 304 369 2.0E-7 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 XDD1_3020 dd6480c0930f1152059b5040724c4c19 441 Gene3D G3DSA:3.40.1190.10 99 302 1.8E-68 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XDD1_3020 dd6480c0930f1152059b5040724c4c19 441 Pfam PF08245 Mur ligase middle domain 115 283 2.7E-23 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XDD1_3020 dd6480c0930f1152059b5040724c4c19 441 Gene3D G3DSA:3.40.50.720 7 98 2.1E-24 T 15-10-2018 XDD1_3020 dd6480c0930f1152059b5040724c4c19 441 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 12 440 32.958 T 15-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 XDD1_3020 dd6480c0930f1152059b5040724c4c19 441 SUPERFAMILY SSF53623 100 299 2.09E-49 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XDD1_3020 dd6480c0930f1152059b5040724c4c19 441 SUPERFAMILY SSF53244 302 440 3.11E-46 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XDD1_3020 dd6480c0930f1152059b5040724c4c19 441 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 13 438 1.4E-124 T 15-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 XDD1_3020 dd6480c0930f1152059b5040724c4c19 441 Gene3D G3DSA:3.90.190.20 303 437 7.6E-43 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XDD1_1789 819c96d02b15bc98390f662f5c7de45d 180 SUPERFAMILY SSF46689 5 116 2.81E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1789 819c96d02b15bc98390f662f5c7de45d 180 Pfam PF13936 Helix-turn-helix domain 3 45 2.5E-15 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_0284 985a3b22608cd9c97666b2036184ad01 92 Gene3D G3DSA:3.30.860.10 1 92 7.7E-44 T 15-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0284 985a3b22608cd9c97666b2036184ad01 92 Pfam PF00203 Ribosomal protein S19 3 83 1.9E-36 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0284 985a3b22608cd9c97666b2036184ad01 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.1E-24 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0284 985a3b22608cd9c97666b2036184ad01 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.1E-24 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0284 985a3b22608cd9c97666b2036184ad01 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.1E-24 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0284 985a3b22608cd9c97666b2036184ad01 92 PIRSF PIRSF002144 1 92 6.6E-32 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0284 985a3b22608cd9c97666b2036184ad01 92 SUPERFAMILY SSF54570 3 84 9.68E-36 T 15-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0284 985a3b22608cd9c97666b2036184ad01 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 15-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0284 985a3b22608cd9c97666b2036184ad01 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.691 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0284 985a3b22608cd9c97666b2036184ad01 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 2.3E-46 T 15-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 XDD1_0343 312bf60bd98f06569284d125e8c49312 118 ProSitePatterns PS00194 Thioredoxin family active site. 35 53 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XDD1_0343 312bf60bd98f06569284d125e8c49312 118 Gene3D G3DSA:3.40.30.10 4 116 1.5E-33 T 15-10-2018 XDD1_0343 312bf60bd98f06569284d125e8c49312 118 TIGRFAM TIGR01068 thioredoxin: thioredoxin 20 116 2.6E-36 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 XDD1_0343 312bf60bd98f06569284d125e8c49312 118 Pfam PF00085 Thioredoxin 15 115 6.4E-31 T 15-10-2018 IPR013766 Thioredoxin domain GO:0045454 XDD1_0343 312bf60bd98f06569284d125e8c49312 118 PIRSF PIRSF000077 12 118 2.4E-40 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 XDD1_0343 312bf60bd98f06569284d125e8c49312 118 SUPERFAMILY SSF52833 11 118 7.95E-39 T 15-10-2018 IPR036249 Thioredoxin-like superfamily XDD1_0343 312bf60bd98f06569284d125e8c49312 118 PRINTS PR00421 Thioredoxin family signature 82 93 1.9E-9 T 15-10-2018 XDD1_0343 312bf60bd98f06569284d125e8c49312 118 PRINTS PR00421 Thioredoxin family signature 34 42 1.9E-9 T 15-10-2018 XDD1_0343 312bf60bd98f06569284d125e8c49312 118 PRINTS PR00421 Thioredoxin family signature 42 51 1.9E-9 T 15-10-2018 XDD1_2806 61454783f89ca5d336b9c9b8dcf3105e 126 Gene3D G3DSA:3.90.470.20 1 126 5.4E-39 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 XDD1_2806 61454783f89ca5d336b9c9b8dcf3105e 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 4.8E-25 T 15-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 XDD1_2806 61454783f89ca5d336b9c9b8dcf3105e 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 1.5E-53 T 15-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 XDD1_2806 61454783f89ca5d336b9c9b8dcf3105e 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.143 T 15-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 XDD1_2806 61454783f89ca5d336b9c9b8dcf3105e 126 SUPERFAMILY SSF56214 3 125 5.23E-30 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 XDD1_2806 61454783f89ca5d336b9c9b8dcf3105e 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 93 2.0E-37 T 15-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 XDD1_2806 61454783f89ca5d336b9c9b8dcf3105e 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 2.3E-37 T 15-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 XDD1_3656 3f6fb352ebbe65dae47c74d79c0bfa7e 254 SUPERFAMILY SSF54534 40 248 4.66E-60 T 15-10-2018 XDD1_3656 3f6fb352ebbe65dae47c74d79c0bfa7e 254 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 32 151 1.2E-31 T 15-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 XDD1_3656 3f6fb352ebbe65dae47c74d79c0bfa7e 254 Gene3D G3DSA:1.10.287.460 26 142 4.7E-27 T 15-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 XDD1_3656 3f6fb352ebbe65dae47c74d79c0bfa7e 254 Gene3D G3DSA:3.10.50.40 143 253 6.2E-40 T 15-10-2018 XDD1_3656 3f6fb352ebbe65dae47c74d79c0bfa7e 254 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 245 2.3E-27 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain XDD1_2462 bf307e6408b1ddfeb2e1e5d7c568c708 349 Gene3D G3DSA:3.20.20.70 41 349 9.9E-71 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_2462 bf307e6408b1ddfeb2e1e5d7c568c708 349 Pfam PF01791 DeoC/LacD family aldolase 69 325 1.2E-71 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 XDD1_2462 bf307e6408b1ddfeb2e1e5d7c568c708 349 SMART SM01133 68 325 1.1E-40 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 XDD1_2462 bf307e6408b1ddfeb2e1e5d7c568c708 349 SUPERFAMILY SSF51569 57 343 1.41E-64 T 15-10-2018 XDD1_1873 e6957c28b81b70271ba0c28d1145b387 321 SUPERFAMILY SSF161098 70 300 6.8E-23 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_1873 e6957c28b81b70271ba0c28d1145b387 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 1.5E-42 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_3002 64bdb916b0be70ae4e78e61508021430 183 Gene3D G3DSA:3.40.80.10 2 182 4.0E-57 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XDD1_3002 64bdb916b0be70ae4e78e61508021430 183 SMART SM00644 16 166 5.2E-50 T 15-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XDD1_3002 64bdb916b0be70ae4e78e61508021430 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 51 167 2.8E-26 T 15-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XDD1_3002 64bdb916b0be70ae4e78e61508021430 183 SUPERFAMILY SSF55846 3 179 6.54E-63 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XDD1_0144 53a0003c455797523001b91d3c789405 325 SUPERFAMILY SSF53756 1 321 4.55E-74 T 15-10-2018 XDD1_0144 53a0003c455797523001b91d3c789405 325 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 299 1.4E-69 T 15-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 XDD1_0144 53a0003c455797523001b91d3c789405 325 Gene3D G3DSA:3.40.50.2000 164 322 5.7E-53 T 15-10-2018 XDD1_0144 53a0003c455797523001b91d3c789405 325 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 316 1.7E-128 T 15-10-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 XDD1_0144 53a0003c455797523001b91d3c789405 325 Gene3D G3DSA:3.40.50.2000 1 163 2.2E-65 T 15-10-2018 XDD1_3736 f0667505a60019f5ebc7c73dda1f0e00 713 Gene3D G3DSA:2.40.50.230 436 535 6.6E-42 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XDD1_3736 f0667505a60019f5ebc7c73dda1f0e00 713 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 102 582 1.0E-167 T 15-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein XDD1_3736 f0667505a60019f5ebc7c73dda1f0e00 713 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 89 599 6.6E-197 T 15-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset XDD1_3736 f0667505a60019f5ebc7c73dda1f0e00 713 Gene3D G3DSA:3.55.50.10 178 269 3.2E-96 T 15-10-2018 XDD1_3736 f0667505a60019f5ebc7c73dda1f0e00 713 Gene3D G3DSA:3.30.1920.30 301 364 3.2E-96 T 15-10-2018 XDD1_3736 f0667505a60019f5ebc7c73dda1f0e00 713 Pfam PF05954 Phage late control gene D protein (GPD) 109 407 5.9E-89 T 15-10-2018 XDD1_3736 f0667505a60019f5ebc7c73dda1f0e00 713 SUPERFAMILY SSF69349 521 700 1.57E-40 T 15-10-2018 XDD1_3736 f0667505a60019f5ebc7c73dda1f0e00 713 SUPERFAMILY SSF69255 443 530 2.62E-34 T 15-10-2018 XDD1_3736 f0667505a60019f5ebc7c73dda1f0e00 713 Gene3D G3DSA:2.30.110.50 98 408 3.2E-96 T 15-10-2018 XDD1_3736 f0667505a60019f5ebc7c73dda1f0e00 713 SUPERFAMILY SSF69279 270 444 2.55E-43 T 15-10-2018 XDD1_3736 f0667505a60019f5ebc7c73dda1f0e00 713 SUPERFAMILY SSF69279 90 265 3.46E-58 T 15-10-2018 XDD1_1704 37cf4bb9c5c9e828f4ee48c5e1f9c55e 180 Pfam PF08719 Domain of unknown function (DUF1768) 20 179 3.9E-54 T 15-10-2018 IPR012816 NADAR XDD1_1704 37cf4bb9c5c9e828f4ee48c5e1f9c55e 180 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 19 178 3.3E-50 T 15-10-2018 IPR012816 NADAR XDD1_1704 37cf4bb9c5c9e828f4ee48c5e1f9c55e 180 SUPERFAMILY SSF143990 6 179 1.96E-52 T 15-10-2018 IPR037238 YbiA-like superfamily XDD1_1704 37cf4bb9c5c9e828f4ee48c5e1f9c55e 180 Gene3D G3DSA:1.10.357.40 21 180 8.3E-43 T 15-10-2018 IPR037238 YbiA-like superfamily XDD1_1341 8d2c456a2c8b8d86bde6cca660effe93 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 8.1E-90 T 15-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_1341 8d2c456a2c8b8d86bde6cca660effe93 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XDD1_1341 8d2c456a2c8b8d86bde6cca660effe93 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 2.5E-31 T 15-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_1341 8d2c456a2c8b8d86bde6cca660effe93 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 3.3E-10 T 15-10-2018 XDD1_1341 8d2c456a2c8b8d86bde6cca660effe93 238 SUPERFAMILY SSF54292 1 106 8.89E-31 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 XDD1_1341 8d2c456a2c8b8d86bde6cca660effe93 238 Gene3D G3DSA:1.10.1060.10 107 238 1.1E-58 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XDD1_1341 8d2c456a2c8b8d86bde6cca660effe93 238 SUPERFAMILY SSF46548 107 235 3.14E-39 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XDD1_1341 8d2c456a2c8b8d86bde6cca660effe93 238 Gene3D G3DSA:3.10.20.30 1 106 5.6E-34 T 15-10-2018 IPR012675 Beta-grasp domain superfamily XDD1_2068 bd46aa614bcb727d94f64627136c274d 102 Pfam PF06250 Protein of unknown function (DUF1016) 5 42 2.5E-7 T 15-10-2018 IPR009362 Protein of unknown function DUF1016 XDD1_0849 5dba318e3004015eade47738a481489b 333 Pfam PF13377 Periplasmic binding protein-like domain 169 329 3.5E-33 T 15-10-2018 XDD1_0849 5dba318e3004015eade47738a481489b 333 Gene3D G3DSA:3.40.50.2300 160 289 8.9E-68 T 15-10-2018 XDD1_0849 5dba318e3004015eade47738a481489b 333 Gene3D G3DSA:1.10.260.40 3 58 4.5E-22 T 15-10-2018 XDD1_0849 5dba318e3004015eade47738a481489b 333 SUPERFAMILY SSF47413 1 56 9.52E-17 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_0849 5dba318e3004015eade47738a481489b 333 SUPERFAMILY SSF53822 61 330 2.98E-80 T 15-10-2018 IPR028082 Periplasmic binding protein-like I XDD1_0849 5dba318e3004015eade47738a481489b 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 15-10-2018 XDD1_0849 5dba318e3004015eade47738a481489b 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.0E-21 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_0849 5dba318e3004015eade47738a481489b 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.7E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_0849 5dba318e3004015eade47738a481489b 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.7E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_0849 5dba318e3004015eade47738a481489b 333 Gene3D G3DSA:3.40.50.2300 63 306 8.9E-68 T 15-10-2018 XDD1_0849 5dba318e3004015eade47738a481489b 333 SMART SM00354 1 71 1.3E-27 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_2145 d11684b69ef9d376f363ba600d8ee1bc 260 Gene3D G3DSA:3.30.450.180 108 246 3.1E-8 T 15-10-2018 XDD1_2145 d11684b69ef9d376f363ba600d8ee1bc 260 SUPERFAMILY SSF47413 34 84 7.95E-5 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_2145 d11684b69ef9d376f363ba600d8ee1bc 260 SMART SM00530 14 86 1.8E-4 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_2145 d11684b69ef9d376f363ba600d8ee1bc 260 Pfam PF13560 Helix-turn-helix domain 14 89 3.9E-14 T 15-10-2018 XDD1_0766 c0f80713796ec62ac2f90f84cf870634 289 Gene3D G3DSA:3.40.630.30 19 139 1.4E-6 T 15-10-2018 XDD1_0766 c0f80713796ec62ac2f90f84cf870634 289 SUPERFAMILY SSF55729 29 268 6.49E-22 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_0062 d500ad74cc58c4388ec381c2269b18c3 208 PIRSF PIRSF000349 1 208 5.7E-78 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_0062 d500ad74cc58c4388ec381c2269b18c3 208 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 9.7E-31 T 15-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_0062 d500ad74cc58c4388ec381c2269b18c3 208 Gene3D G3DSA:1.10.287.990 20 90 4.6E-30 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_0062 d500ad74cc58c4388ec381c2269b18c3 208 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 202 1.0E-40 T 15-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_0062 d500ad74cc58c4388ec381c2269b18c3 208 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 169 176 - T 15-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_0062 d500ad74cc58c4388ec381c2269b18c3 208 SUPERFAMILY SSF46609 1 90 1.7E-34 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_0062 d500ad74cc58c4388ec381c2269b18c3 208 SUPERFAMILY SSF54719 96 205 1.57E-44 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_0062 d500ad74cc58c4388ec381c2269b18c3 208 Gene3D G3DSA:2.40.500.20 96 208 2.1E-49 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_0062 d500ad74cc58c4388ec381c2269b18c3 208 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.5E-27 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_0062 d500ad74cc58c4388ec381c2269b18c3 208 PRINTS PR01703 Manganese superoxide dismutase signature 167 179 2.5E-27 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_0062 d500ad74cc58c4388ec381c2269b18c3 208 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 2.5E-27 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_0062 d500ad74cc58c4388ec381c2269b18c3 208 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 2.5E-27 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_0062 d500ad74cc58c4388ec381c2269b18c3 208 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.5E-27 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_0647 799848fb18892fe111b0f37415135084 548 SUPERFAMILY SSF54849 137 203 3.89E-24 T 15-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily XDD1_0647 799848fb18892fe111b0f37415135084 548 SUPERFAMILY SSF52029 184 376 1.22E-82 T 15-10-2018 IPR027409 GroEL-like apical domain superfamily XDD1_0647 799848fb18892fe111b0f37415135084 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 4.4E-255 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XDD1_0647 799848fb18892fe111b0f37415135084 548 Gene3D G3DSA:3.30.260.10 136 410 9.4E-240 T 15-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily XDD1_0647 799848fb18892fe111b0f37415135084 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.567 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XDD1_0647 799848fb18892fe111b0f37415135084 548 Gene3D G3DSA:1.10.560.10 8 521 9.4E-240 T 15-10-2018 IPR027413 GroEL-like equatorial domain superfamily XDD1_0647 799848fb18892fe111b0f37415135084 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XDD1_0647 799848fb18892fe111b0f37415135084 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XDD1_0647 799848fb18892fe111b0f37415135084 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XDD1_0647 799848fb18892fe111b0f37415135084 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XDD1_0647 799848fb18892fe111b0f37415135084 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XDD1_0647 799848fb18892fe111b0f37415135084 548 Gene3D G3DSA:3.50.7.10 192 372 9.4E-240 T 15-10-2018 IPR027409 GroEL-like apical domain superfamily XDD1_0647 799848fb18892fe111b0f37415135084 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.5E-96 T 15-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 XDD1_0647 799848fb18892fe111b0f37415135084 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 15-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XDD1_0647 799848fb18892fe111b0f37415135084 548 SUPERFAMILY SSF48592 7 521 3.82E-77 T 15-10-2018 IPR027413 GroEL-like equatorial domain superfamily XDD1_0379 ba574f4d2d2330cc93c190895ae30cfd 161 Pfam PF03061 Thioesterase superfamily 63 149 1.4E-16 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 XDD1_0379 ba574f4d2d2330cc93c190895ae30cfd 161 SUPERFAMILY SSF54637 18 160 1.02E-24 T 15-10-2018 IPR029069 HotDog domain superfamily XDD1_0379 ba574f4d2d2330cc93c190895ae30cfd 161 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 31 159 2.7E-17 T 15-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 XDD1_0379 ba574f4d2d2330cc93c190895ae30cfd 161 Gene3D G3DSA:3.10.129.10 8 161 2.3E-49 T 15-10-2018 XDD1_1138 808b580a056d649d652afb33aadaa7b9 309 Pfam PF04960 Glutaminase 25 309 1.8E-115 T 15-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 XDD1_1138 808b580a056d649d652afb33aadaa7b9 309 SUPERFAMILY SSF56601 8 309 8.45E-117 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XDD1_1138 808b580a056d649d652afb33aadaa7b9 309 TIGRFAM TIGR03814 Gln_ase: glutaminase A 11 309 3.7E-133 T 15-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 XDD1_1138 808b580a056d649d652afb33aadaa7b9 309 Hamap MF_00313 Glutaminase [glsA]. 7 309 46.952 T 15-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 XDD1_1138 808b580a056d649d652afb33aadaa7b9 309 Gene3D G3DSA:3.40.710.10 3 309 9.1E-114 T 15-10-2018 XDD1_1582 5e4aa9d7b3f9f66fdb57389760dfd192 261 Gene3D G3DSA:3.40.50.150 8 260 1.9E-67 T 15-10-2018 XDD1_1582 5e4aa9d7b3f9f66fdb57389760dfd192 261 SUPERFAMILY SSF53335 4 255 7.08E-37 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_1582 5e4aa9d7b3f9f66fdb57389760dfd192 261 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 2 255 41.977 T 15-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 XDD1_1582 5e4aa9d7b3f9f66fdb57389760dfd192 261 Pfam PF13847 Methyltransferase domain 44 147 2.0E-17 T 15-10-2018 IPR025714 Methyltransferase domain XDD1_1187 38c10ac6db9d305bc626cb05289b268a 351 Gene3D G3DSA:2.30.40.20 21 73 7.1E-65 T 15-10-2018 XDD1_1187 38c10ac6db9d305bc626cb05289b268a 351 SUPERFAMILY SSF56672 1 233 1.6E-92 T 15-10-2018 XDD1_1187 38c10ac6db9d305bc626cb05289b268a 351 Pfam PF11798 IMS family HHH motif 167 197 1.6E-7 T 15-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 XDD1_1187 38c10ac6db9d305bc626cb05289b268a 351 SUPERFAMILY SSF100879 241 349 6.47E-26 T 15-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 XDD1_1187 38c10ac6db9d305bc626cb05289b268a 351 Pfam PF00817 impB/mucB/samB family 7 154 2.4E-48 T 15-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 XDD1_1187 38c10ac6db9d305bc626cb05289b268a 351 Gene3D G3DSA:3.30.70.270 4 164 7.1E-65 T 15-10-2018 XDD1_1187 38c10ac6db9d305bc626cb05289b268a 351 Pfam PF11799 impB/mucB/samB family C-terminal domain 235 337 1.2E-7 T 15-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 XDD1_1187 38c10ac6db9d305bc626cb05289b268a 351 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 36.68 T 15-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 XDD1_1187 38c10ac6db9d305bc626cb05289b268a 351 Gene3D G3DSA:3.30.1490.100 237 351 2.8E-28 T 15-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 XDD1_1187 38c10ac6db9d305bc626cb05289b268a 351 Gene3D G3DSA:1.10.150.20 166 228 7.2E-18 T 15-10-2018 XDD1_3305 fca50ea399f46b5dc8ae19421643c40c 285 Pfam PF00889 Elongation factor TS 73 265 3.6E-66 T 15-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 XDD1_3305 fca50ea399f46b5dc8ae19421643c40c 285 Gene3D G3DSA:1.10.8.10 1 56 3.8E-27 T 15-10-2018 XDD1_3305 fca50ea399f46b5dc8ae19421643c40c 285 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 284 3.2E-115 T 15-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XDD1_3305 fca50ea399f46b5dc8ae19421643c40c 285 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 15-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XDD1_3305 fca50ea399f46b5dc8ae19421643c40c 285 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 15-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XDD1_3305 fca50ea399f46b5dc8ae19421643c40c 285 SUPERFAMILY SSF54713 144 283 4.71E-53 T 15-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 XDD1_3305 fca50ea399f46b5dc8ae19421643c40c 285 Gene3D G3DSA:3.30.479.20 57 143 1.1E-26 T 15-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 XDD1_3305 fca50ea399f46b5dc8ae19421643c40c 285 Gene3D G3DSA:1.10.286.20 189 228 9.1E-23 T 15-10-2018 XDD1_3305 fca50ea399f46b5dc8ae19421643c40c 285 SUPERFAMILY SSF46934 3 56 7.06E-19 T 15-10-2018 IPR009060 UBA-like superfamily GO:0005515 XDD1_3305 fca50ea399f46b5dc8ae19421643c40c 285 SUPERFAMILY SSF54713 56 141 1.11E-19 T 15-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 XDD1_3305 fca50ea399f46b5dc8ae19421643c40c 285 Hamap MF_00050 Elongation factor Ts [tsf]. 1 282 78.785 T 15-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XDD1_0880 f49d6f7dcb3c20ffd7e25f11346c286f 626 Gene3D G3DSA:3.10.50.40 269 370 4.4E-30 T 15-10-2018 XDD1_0880 f49d6f7dcb3c20ffd7e25f11346c286f 626 Pfam PF13145 PPIC-type PPIASE domain 252 373 1.0E-21 T 15-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 XDD1_0880 f49d6f7dcb3c20ffd7e25f11346c286f 626 Pfam PF13624 SurA N-terminal domain 1 169 9.9E-44 T 15-10-2018 XDD1_0880 f49d6f7dcb3c20ffd7e25f11346c286f 626 SUPERFAMILY SSF109998 40 249 1.88E-29 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily XDD1_0880 f49d6f7dcb3c20ffd7e25f11346c286f 626 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 300 321 - T 15-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 XDD1_0880 f49d6f7dcb3c20ffd7e25f11346c286f 626 Gene3D G3DSA:1.10.4030.30 42 184 2.3E-13 T 15-10-2018 XDD1_0880 f49d6f7dcb3c20ffd7e25f11346c286f 626 SUPERFAMILY SSF54534 227 360 1.5E-22 T 15-10-2018 XDD1_1323 a6bdaec92b1e9a49fc24470ebaff69ee 546 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 487 537 2.1E-6 T 15-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_1323 a6bdaec92b1e9a49fc24470ebaff69ee 546 SUPERFAMILY SSF53738 305 447 1.29E-30 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_1323 a6bdaec92b1e9a49fc24470ebaff69ee 546 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 3.2E-16 T 15-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_1323 a6bdaec92b1e9a49fc24470ebaff69ee 546 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 2 543 8.3E-300 T 15-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 XDD1_1323 a6bdaec92b1e9a49fc24470ebaff69ee 546 Gene3D G3DSA:3.30.310.50 443 545 1.5E-33 T 15-10-2018 XDD1_1323 a6bdaec92b1e9a49fc24470ebaff69ee 546 Gene3D G3DSA:3.40.120.10 319 442 1.1E-34 T 15-10-2018 XDD1_1323 a6bdaec92b1e9a49fc24470ebaff69ee 546 SUPERFAMILY SSF55957 432 543 1.18E-18 T 15-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_1323 a6bdaec92b1e9a49fc24470ebaff69ee 546 Gene3D G3DSA:3.40.120.10 12 218 4.9E-76 T 15-10-2018 XDD1_1323 a6bdaec92b1e9a49fc24470ebaff69ee 546 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 439 3.2E-28 T 15-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_1323 a6bdaec92b1e9a49fc24470ebaff69ee 546 SUPERFAMILY SSF53738 209 317 2.47E-7 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_1323 a6bdaec92b1e9a49fc24470ebaff69ee 546 SUPERFAMILY SSF53738 25 235 2.12E-53 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_1323 a6bdaec92b1e9a49fc24470ebaff69ee 546 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 15-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_1323 a6bdaec92b1e9a49fc24470ebaff69ee 546 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 3.8E-38 T 15-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XDD1_1323 a6bdaec92b1e9a49fc24470ebaff69ee 546 Gene3D G3DSA:3.40.120.10 221 318 1.9E-44 T 15-10-2018 XDD1_3126 e1c225c56dffe37897d5f3ab944ba97f 747 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 2.0E-36 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 XDD1_3126 e1c225c56dffe37897d5f3ab944ba97f 747 Gene3D G3DSA:3.30.460.10 209 341 2.5E-50 T 15-10-2018 XDD1_3126 e1c225c56dffe37897d5f3ab944ba97f 747 Gene3D G3DSA:3.30.70.260 664 746 1.9E-17 T 15-10-2018 XDD1_3126 e1c225c56dffe37897d5f3ab944ba97f 747 SUPERFAMILY SSF109604 23 207 5.02E-45 T 15-10-2018 XDD1_3126 e1c225c56dffe37897d5f3ab944ba97f 747 SUPERFAMILY SSF81301 196 411 5.89E-64 T 15-10-2018 XDD1_3126 e1c225c56dffe37897d5f3ab944ba97f 747 Pfam PF02824 TGS domain 407 466 1.8E-20 T 15-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 XDD1_3126 e1c225c56dffe37897d5f3ab944ba97f 747 SUPERFAMILY SSF55021 666 742 5.34E-13 T 15-10-2018 XDD1_3126 e1c225c56dffe37897d5f3ab944ba97f 747 Pfam PF13328 HD domain 43 191 6.0E-40 T 15-10-2018 IPR003607 HD/PDEase domain XDD1_3126 e1c225c56dffe37897d5f3ab944ba97f 747 SUPERFAMILY SSF81271 400 466 5.07E-22 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 XDD1_3126 e1c225c56dffe37897d5f3ab944ba97f 747 SMART SM00954 251 361 3.3E-66 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 XDD1_3126 e1c225c56dffe37897d5f3ab944ba97f 747 Gene3D G3DSA:1.10.3210.10 18 207 1.5E-38 T 15-10-2018 XDD1_3126 e1c225c56dffe37897d5f3ab944ba97f 747 Pfam PF13291 ACT domain 665 741 1.1E-16 T 15-10-2018 IPR002912 ACT domain XDD1_3126 e1c225c56dffe37897d5f3ab944ba97f 747 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 63 740 2.3E-186 T 15-10-2018 IPR004811 RelA/SpoT family GO:0015969 XDD1_3126 e1c225c56dffe37897d5f3ab944ba97f 747 Gene3D G3DSA:3.10.20.30 401 473 9.8E-33 T 15-10-2018 IPR012675 Beta-grasp domain superfamily XDD1_1168 043cb7225516135438215752e5b990bf 255 SUPERFAMILY SSF56235 2 252 1.76E-44 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XDD1_1168 043cb7225516135438215752e5b990bf 255 Pfam PF13230 Glutamine amidotransferases class-II 1 252 2.1E-107 T 15-10-2018 IPR026869 Putative glutamine amidotransferase type 2 XDD1_1168 043cb7225516135438215752e5b990bf 255 Gene3D G3DSA:3.60.20.10 1 255 7.4E-93 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XDD1_3972 a35fa24474dc4c54e5d525042ac74e84 545 Pfam PF14849 YidC periplasmic domain 55 336 4.0E-87 T 15-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain XDD1_3972 a35fa24474dc4c54e5d525042ac74e84 545 Gene3D G3DSA:2.70.98.90 50 326 2.7E-103 T 15-10-2018 IPR038221 YidC, periplasmic domain superfamily XDD1_3972 a35fa24474dc4c54e5d525042ac74e84 545 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 345 3.8E-110 T 15-10-2018 IPR028053 Membrane insertase YidC, N-terminal XDD1_3972 a35fa24474dc4c54e5d525042ac74e84 545 PRINTS PR01900 YidC translocation/secretion protein signature 332 348 5.0E-29 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XDD1_3972 a35fa24474dc4c54e5d525042ac74e84 545 PRINTS PR01900 YidC translocation/secretion protein signature 461 476 5.0E-29 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XDD1_3972 a35fa24474dc4c54e5d525042ac74e84 545 PRINTS PR01900 YidC translocation/secretion protein signature 481 505 5.0E-29 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XDD1_3972 a35fa24474dc4c54e5d525042ac74e84 545 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 528 26.224 T 15-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 XDD1_3972 a35fa24474dc4c54e5d525042ac74e84 545 Pfam PF02096 60Kd inner membrane protein 347 524 8.6E-60 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XDD1_3972 a35fa24474dc4c54e5d525042ac74e84 545 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 346 525 1.0E-69 T 15-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3972 a35fa24474dc4c54e5d525042ac74e84 545 PRINTS PR00701 60kDa inner membrane protein signature 317 337 4.5E-105 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XDD1_3972 a35fa24474dc4c54e5d525042ac74e84 545 PRINTS PR00701 60kDa inner membrane protein signature 408 431 4.5E-105 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XDD1_3972 a35fa24474dc4c54e5d525042ac74e84 545 PRINTS PR00701 60kDa inner membrane protein signature 243 258 4.5E-105 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XDD1_3972 a35fa24474dc4c54e5d525042ac74e84 545 PRINTS PR00701 60kDa inner membrane protein signature 150 170 4.5E-105 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XDD1_3972 a35fa24474dc4c54e5d525042ac74e84 545 PRINTS PR00701 60kDa inner membrane protein signature 455 477 4.5E-105 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XDD1_3972 a35fa24474dc4c54e5d525042ac74e84 545 PRINTS PR00701 60kDa inner membrane protein signature 492 515 4.5E-105 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XDD1_3972 a35fa24474dc4c54e5d525042ac74e84 545 PRINTS PR00701 60kDa inner membrane protein signature 2 23 4.5E-105 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XDD1_3972 a35fa24474dc4c54e5d525042ac74e84 545 PRINTS PR00701 60kDa inner membrane protein signature 60 81 4.5E-105 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XDD1_3972 a35fa24474dc4c54e5d525042ac74e84 545 PRINTS PR00701 60kDa inner membrane protein signature 209 227 4.5E-105 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XDD1_2427 67c34183aef78c2ea28981035d28198b 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 1.0E-89 T 15-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 XDD1_2427 67c34183aef78c2ea28981035d28198b 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.65 T 15-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 XDD1_2427 67c34183aef78c2ea28981035d28198b 208 Gene3D G3DSA:3.40.50.2020 1 208 5.1E-73 T 15-10-2018 XDD1_2427 67c34183aef78c2ea28981035d28198b 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 2.3E-64 T 15-10-2018 XDD1_2427 67c34183aef78c2ea28981035d28198b 208 SUPERFAMILY SSF53271 4 206 1.97E-68 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like XDD1_2504 3f306048d6972355f834fa01f71c198f 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 4.3E-128 T 15-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 XDD1_2504 3f306048d6972355f834fa01f71c198f 309 Gene3D G3DSA:3.40.366.10 6 286 3.5E-108 T 15-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 XDD1_2504 3f306048d6972355f834fa01f71c198f 309 SUPERFAMILY SSF52151 4 306 8.11E-80 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase XDD1_2504 3f306048d6972355f834fa01f71c198f 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 305 5.6E-41 T 15-10-2018 IPR020801 Polyketide synthase, acyl transferase domain XDD1_2504 3f306048d6972355f834fa01f71c198f 309 SUPERFAMILY SSF55048 128 197 1.27E-17 T 15-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding XDD1_2504 3f306048d6972355f834fa01f71c198f 309 Pfam PF00698 Acyl transferase domain 7 302 2.5E-38 T 15-10-2018 IPR014043 Acyl transferase XDD1_2504 3f306048d6972355f834fa01f71c198f 309 Gene3D G3DSA:3.30.70.250 125 197 3.5E-108 T 15-10-2018 XDD1_2504 3f306048d6972355f834fa01f71c198f 309 PIRSF PIRSF000446 1 309 1.2E-138 T 15-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 Pfam PF00072 Response regulator receiver domain 547 652 1.7E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 SMART SM00387 406 522 1.6E-36 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 SUPERFAMILY SSF52172 544 663 2.13E-28 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 SUPERFAMILY SSF158472 202 251 8.11E-5 T 15-10-2018 XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 SUPERFAMILY SSF47384 279 360 4.71E-22 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 SUPERFAMILY SSF55874 348 518 1.57E-42 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 Pfam PF00512 His Kinase A (phospho-acceptor) domain 295 358 4.6E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 SMART SM00448 545 654 4.2E-17 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 Gene3D G3DSA:1.20.120.160 666 777 1.6E-27 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 Gene3D G3DSA:1.10.287.130 260 357 5.8E-28 T 15-10-2018 XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 SUPERFAMILY SSF47226 639 768 3.14E-16 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 Pfam PF01627 Hpt domain 684 764 2.2E-10 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 475 8.9E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 461 8.9E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 519 8.9E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 500 8.9E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 SMART SM00388 294 359 4.6E-23 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 SMART SM00304 202 254 1.6E-4 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 Gene3D G3DSA:3.40.50.2300 545 665 6.8E-27 T 15-10-2018 XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 Gene3D G3DSA:1.20.1480.50 167 259 1.8E-5 T 15-10-2018 XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 406 521 7.8E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 Gene3D G3DSA:3.30.565.10 360 525 1.2E-48 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_3124 5cf4270ead14a807fb85b6c4aa45ef09 784 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 33 179 1.3E-45 T 15-10-2018 IPR019247 Histidine kinase BarA, N-terminal XDD1_1591 79630245f1cd7634a154e971a620d5a0 368 Pfam PF00267 Gram-negative porin 27 368 5.4E-132 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 XDD1_1591 79630245f1cd7634a154e971a620d5a0 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 3.9E-63 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 XDD1_1591 79630245f1cd7634a154e971a620d5a0 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 238 255 3.9E-63 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 XDD1_1591 79630245f1cd7634a154e971a620d5a0 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 3.9E-63 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 XDD1_1591 79630245f1cd7634a154e971a620d5a0 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 3.9E-63 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 XDD1_1591 79630245f1cd7634a154e971a620d5a0 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 52 70 3.9E-63 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 XDD1_1591 79630245f1cd7634a154e971a620d5a0 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 275 294 3.9E-63 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 XDD1_1591 79630245f1cd7634a154e971a620d5a0 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 232 244 1.4E-15 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 XDD1_1591 79630245f1cd7634a154e971a620d5a0 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 1.4E-15 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 XDD1_1591 79630245f1cd7634a154e971a620d5a0 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 1.4E-15 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 XDD1_1591 79630245f1cd7634a154e971a620d5a0 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 53 64 1.4E-15 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 XDD1_1591 79630245f1cd7634a154e971a620d5a0 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 323 340 1.4E-15 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 XDD1_1591 79630245f1cd7634a154e971a620d5a0 368 Gene3D G3DSA:2.40.160.10 22 368 6.5E-134 T 15-10-2018 IPR023614 Porin domain superfamily XDD1_1591 79630245f1cd7634a154e971a620d5a0 368 SUPERFAMILY SSF56935 22 368 6.41E-73 T 15-10-2018 XDD1_1591 79630245f1cd7634a154e971a620d5a0 368 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 323 339 - T 15-10-2018 IPR013793 Porin, Gram-negative type, conserved site XDD1_0924 f3e10d917adf4cf0dde77ce014fad794 309 SUPERFAMILY SSF117892 53 187 5.75E-41 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily XDD1_0924 f3e10d917adf4cf0dde77ce014fad794 309 Gene3D G3DSA:3.30.479.30 50 182 2.8E-43 T 15-10-2018 XDD1_0924 f3e10d917adf4cf0dde77ce014fad794 309 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 15-10-2018 IPR018080 Band 7/stomatin-like, conserved site XDD1_0924 f3e10d917adf4cf0dde77ce014fad794 309 PRINTS PR00721 Stomatin signature 77 98 2.0E-27 T 15-10-2018 IPR001972 Stomatin family GO:0016020 XDD1_0924 f3e10d917adf4cf0dde77ce014fad794 309 PRINTS PR00721 Stomatin signature 175 196 2.0E-27 T 15-10-2018 IPR001972 Stomatin family GO:0016020 XDD1_0924 f3e10d917adf4cf0dde77ce014fad794 309 PRINTS PR00721 Stomatin signature 112 129 2.0E-27 T 15-10-2018 IPR001972 Stomatin family GO:0016020 XDD1_0924 f3e10d917adf4cf0dde77ce014fad794 309 PRINTS PR00721 Stomatin signature 156 174 2.0E-27 T 15-10-2018 IPR001972 Stomatin family GO:0016020 XDD1_0924 f3e10d917adf4cf0dde77ce014fad794 309 PRINTS PR00721 Stomatin signature 132 155 2.0E-27 T 15-10-2018 IPR001972 Stomatin family GO:0016020 XDD1_0924 f3e10d917adf4cf0dde77ce014fad794 309 SMART SM00244 22 180 1.7E-61 T 15-10-2018 IPR001107 Band 7 domain XDD1_0924 f3e10d917adf4cf0dde77ce014fad794 309 Pfam PF01145 SPFH domain / Band 7 family 26 195 1.9E-34 T 15-10-2018 IPR001107 Band 7 domain XDD1_3192 525d01bfd978ff324f386227d8a72aa3 162 SMART SM00738 1 100 2.6E-23 T 15-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XDD1_3192 525d01bfd978ff324f386227d8a72aa3 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 158 2.3E-54 T 15-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 XDD1_3192 525d01bfd978ff324f386227d8a72aa3 162 SUPERFAMILY SSF82679 1 102 3.92E-28 T 15-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XDD1_3192 525d01bfd978ff324f386227d8a72aa3 162 Pfam PF02357 Transcription termination factor nusG 3 96 2.4E-17 T 15-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XDD1_3192 525d01bfd978ff324f386227d8a72aa3 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 45.779 T 15-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 XDD1_3192 525d01bfd978ff324f386227d8a72aa3 162 Gene3D G3DSA:3.30.70.940 1 162 2.9E-54 T 15-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XDD1_0583 76003d83db43e6bb1c3e3a139a9942da 384 SUPERFAMILY SSF51182 31 380 2.39E-114 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily XDD1_0583 76003d83db43e6bb1c3e3a139a9942da 384 Gene3D G3DSA:2.60.120.10 29 384 1.1E-126 T 15-10-2018 IPR014710 RmlC-like jelly roll fold XDD1_0583 76003d83db43e6bb1c3e3a139a9942da 384 Pfam PF07883 Cupin domain 288 355 1.2E-10 T 15-10-2018 IPR013096 Cupin 2, conserved barrel XDD1_0583 76003d83db43e6bb1c3e3a139a9942da 384 Pfam PF07883 Cupin domain 116 187 1.0E-16 T 15-10-2018 IPR013096 Cupin 2, conserved barrel XDD1_2680 f4d80047544f4fffde898e8d6c337e08 330 Gene3D G3DSA:3.40.47.10 1 326 2.6E-96 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2680 f4d80047544f4fffde898e8d6c337e08 330 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 112 186 5.4E-15 T 15-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XDD1_2680 f4d80047544f4fffde898e8d6c337e08 330 SUPERFAMILY SSF53901 38 315 1.07E-40 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2680 f4d80047544f4fffde898e8d6c337e08 330 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 229 314 8.5E-23 T 15-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XDD1_3012 1ff29ab38e913e7db15c8d41e44ac4b0 305 SUPERFAMILY SSF54211 135 277 6.22E-53 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_3012 1ff29ab38e913e7db15c8d41e44ac4b0 305 SUPERFAMILY SSF54211 3 124 1.06E-41 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_3012 1ff29ab38e913e7db15c8d41e44ac4b0 305 Gene3D G3DSA:3.30.1700.10 129 305 1.6E-72 T 15-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XDD1_3012 1ff29ab38e913e7db15c8d41e44ac4b0 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 1.5E-107 T 15-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XDD1_3012 1ff29ab38e913e7db15c8d41e44ac4b0 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 301 1.4E-154 T 15-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XDD1_3012 1ff29ab38e913e7db15c8d41e44ac4b0 305 Gene3D G3DSA:3.30.230.20 1 128 7.7E-52 T 15-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XDD1_3012 1ff29ab38e913e7db15c8d41e44ac4b0 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 45.732 T 15-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XDD1_0593 5ae43fc972527efdb3e545aa9bbeef26 230 Pfam PF08798 CRISPR associated protein 1 228 5.9E-50 T 15-10-2018 IPR010179 CRISPR-associated protein Cse3 XDD1_0593 5ae43fc972527efdb3e545aa9bbeef26 230 SUPERFAMILY SSF117987 1 67 1.7E-9 T 15-10-2018 XDD1_0593 5ae43fc972527efdb3e545aa9bbeef26 230 SUPERFAMILY SSF117987 84 228 1.65E-24 T 15-10-2018 XDD1_0593 5ae43fc972527efdb3e545aa9bbeef26 230 Gene3D G3DSA:3.30.70.1200 1 83 3.7E-9 T 15-10-2018 XDD1_0593 5ae43fc972527efdb3e545aa9bbeef26 230 Gene3D G3DSA:3.30.70.1210 84 230 2.6E-26 T 15-10-2018 XDD1_0593 5ae43fc972527efdb3e545aa9bbeef26 230 SMART SM01101 1 229 2.6E-76 T 15-10-2018 IPR010179 CRISPR-associated protein Cse3 XDD1_0593 5ae43fc972527efdb3e545aa9bbeef26 230 TIGRFAM TIGR01907 casE_Cse3: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI 1 228 2.2E-53 T 15-10-2018 IPR010179 CRISPR-associated protein Cse3 XDD1_2918 5720910cca33a84c05a7099f7f6b4321 67 Pfam PF05489 Phage Tail Protein X 1 55 1.1E-27 T 15-10-2018 IPR008861 Phage Tail Protein X-like XDD1_2918 5720910cca33a84c05a7099f7f6b4321 67 Gene3D G3DSA:3.10.350.10 1 67 5.1E-30 T 15-10-2018 IPR036779 LysM domain superfamily XDD1_1761 996d8f46f422e1cd9f03fff0bcdf5197 226 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 79 107 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 XDD1_1761 996d8f46f422e1cd9f03fff0bcdf5197 226 Gene3D G3DSA:1.10.530.10 47 222 1.6E-47 T 15-10-2018 XDD1_1761 996d8f46f422e1cd9f03fff0bcdf5197 226 Pfam PF01464 Transglycosylase SLT domain 61 187 1.8E-29 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 XDD1_1761 996d8f46f422e1cd9f03fff0bcdf5197 226 SUPERFAMILY SSF53955 57 222 4.79E-32 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily XDD1_3120 a9d787e82e96f52620a8fb5849cf31b3 114 Gene3D G3DSA:2.60.300.12 9 114 2.5E-33 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XDD1_3120 a9d787e82e96f52620a8fb5849cf31b3 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 36.561 T 15-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 XDD1_3120 a9d787e82e96f52620a8fb5849cf31b3 114 SUPERFAMILY SSF89360 8 103 1.57E-30 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XDD1_3120 a9d787e82e96f52620a8fb5849cf31b3 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 3.1E-38 T 15-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 XDD1_3120 a9d787e82e96f52620a8fb5849cf31b3 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 2.9E-20 T 15-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 XDD1_3120 a9d787e82e96f52620a8fb5849cf31b3 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 15-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 XDD1_3944 a3717262e44e3473df4570bb19fc4206 82 PRINTS PR01296 Cloacin immunity protein signature 19 39 7.3E-30 T 15-10-2018 IPR003063 Cloacin immunity protein family GO:0015643|GO:0030153 XDD1_3944 a3717262e44e3473df4570bb19fc4206 82 PRINTS PR01296 Cloacin immunity protein signature 41 60 7.3E-30 T 15-10-2018 IPR003063 Cloacin immunity protein family GO:0015643|GO:0030153 XDD1_3944 a3717262e44e3473df4570bb19fc4206 82 PRINTS PR01296 Cloacin immunity protein signature 61 82 7.3E-30 T 15-10-2018 IPR003063 Cloacin immunity protein family GO:0015643|GO:0030153 XDD1_3944 a3717262e44e3473df4570bb19fc4206 82 PRINTS PR01296 Cloacin immunity protein signature 2 18 7.3E-30 T 15-10-2018 IPR003063 Cloacin immunity protein family GO:0015643|GO:0030153 XDD1_3944 a3717262e44e3473df4570bb19fc4206 82 Pfam PF03513 Cloacin immunity protein 2 81 4.9E-40 T 15-10-2018 IPR003063 Cloacin immunity protein family GO:0015643|GO:0030153 XDD1_3944 a3717262e44e3473df4570bb19fc4206 82 SUPERFAMILY SSF54552 2 82 6.02E-35 T 15-10-2018 IPR036528 Cloacin immunity protein superfamily GO:0015643|GO:0030153 XDD1_3944 a3717262e44e3473df4570bb19fc4206 82 ProDom PD015223 IMMUNITY PLASMID BACTERIOCIN C COLICIN-E3 KLEBICIN 3D-STRUCTURE COLICIN CLOACIN IMME3 10 82 7.0E-23 T 15-10-2018 IPR003063 Cloacin immunity protein family GO:0015643|GO:0030153 XDD1_3944 a3717262e44e3473df4570bb19fc4206 82 Gene3D G3DSA:3.10.50.20 2 82 5.5E-34 T 15-10-2018 IPR036528 Cloacin immunity protein superfamily GO:0015643|GO:0030153 XDD1_0279 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0279 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0279 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 15-10-2018 IPR036838 Ribosomal protein S10 domain superfamily XDD1_0279 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0279 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0279 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0279 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 1 103 3.9E-38 T 15-10-2018 IPR036838 Ribosomal protein S10 domain superfamily XDD1_0279 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 15-10-2018 IPR027486 Ribosomal protein S10 domain XDD1_0279 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.1E-35 T 15-10-2018 IPR027486 Ribosomal protein S10 domain XDD1_0279 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 15-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_1493 321693bf78fa3daec3dfcf3e049a1fe4 106 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 19 69 2.6E-19 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 XDD1_3127 d638407be8ffca8868f652c852c6cdcf 268 SUPERFAMILY SSF101386 6 107 4.58E-25 T 15-10-2018 XDD1_3127 d638407be8ffca8868f652c852c6cdcf 268 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 32 105 1.3E-27 T 15-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core XDD1_3127 d638407be8ffca8868f652c852c6cdcf 268 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 172 235 5.7E-10 T 15-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core XDD1_3127 d638407be8ffca8868f652c852c6cdcf 268 SUPERFAMILY SSF101386 140 240 7.85E-26 T 15-10-2018 XDD1_3127 d638407be8ffca8868f652c852c6cdcf 268 TIGRFAM TIGR00444 mazG: MazG family protein 15 262 5.6E-105 T 15-10-2018 IPR011551 NTP pyrophosphohydrolase MazG XDD1_3127 d638407be8ffca8868f652c852c6cdcf 268 Gene3D G3DSA:1.10.287.1080 134 265 2.4E-49 T 15-10-2018 XDD1_3127 d638407be8ffca8868f652c852c6cdcf 268 Gene3D G3DSA:1.10.287.1080 6 130 1.4E-44 T 15-10-2018 XDD1_0694 7028a3b9ea5558f65aad075ded187431 259 SUPERFAMILY SSF161098 3 254 7.2E-57 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_0694 7028a3b9ea5558f65aad075ded187431 259 Gene3D G3DSA:1.10.3720.10 6 258 4.7E-49 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_0694 7028a3b9ea5558f65aad075ded187431 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 252 2.2E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_1209 d581db660feeaf7054f88da60bf43cb7 250 Gene3D G3DSA:1.10.1270.20 161 250 2.2E-36 T 15-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XDD1_1209 d581db660feeaf7054f88da60bf43cb7 250 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 2.3E-70 T 15-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XDD1_1209 d581db660feeaf7054f88da60bf43cb7 250 PIRSF PIRSF000386 1 250 7.5E-102 T 15-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XDD1_1209 d581db660feeaf7054f88da60bf43cb7 250 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 250 120.418 T 15-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XDD1_1209 d581db660feeaf7054f88da60bf43cb7 250 Gene3D G3DSA:3.40.1280.10 1 160 7.6E-68 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XDD1_1209 d581db660feeaf7054f88da60bf43cb7 250 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 1.6E-110 T 15-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XDD1_1209 d581db660feeaf7054f88da60bf43cb7 250 SUPERFAMILY SSF75217 1 246 3.79E-103 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases XDD1_3776 8841fca344f6a6083cefa733e464e6bf 345 SUPERFAMILY SSF52540 23 272 3.08E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3776 8841fca344f6a6083cefa733e464e6bf 345 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 251 335 4.2E-25 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 XDD1_3776 8841fca344f6a6083cefa733e464e6bf 345 Pfam PF00005 ABC transporter 49 200 6.5E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_3776 8841fca344f6a6083cefa733e464e6bf 345 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_3776 8841fca344f6a6083cefa733e464e6bf 345 Gene3D G3DSA:3.40.50.300 21 344 1.1E-94 T 15-10-2018 XDD1_3776 8841fca344f6a6083cefa733e464e6bf 345 SMART SM00382 58 250 4.7E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3776 8841fca344f6a6083cefa733e464e6bf 345 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 252 317 2.2E-19 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 XDD1_1203 d03b01e30d8807e378799e0f2c769d54 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.9E-48 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 XDD1_1203 d03b01e30d8807e378799e0f2c769d54 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 1.9E-48 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 XDD1_1203 d03b01e30d8807e378799e0f2c769d54 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.9E-48 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 XDD1_1203 d03b01e30d8807e378799e0f2c769d54 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.9E-48 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 XDD1_1203 d03b01e30d8807e378799e0f2c769d54 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 1.9E-48 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 XDD1_1203 d03b01e30d8807e378799e0f2c769d54 171 Gene3D G3DSA:3.30.1360.80 1 171 2.5E-70 T 15-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 XDD1_1203 d03b01e30d8807e378799e0f2c769d54 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 8.0E-75 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 XDD1_1203 d03b01e30d8807e378799e0f2c769d54 171 PIRSF PIRSF006160 1 162 4.7E-64 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 XDD1_1203 d03b01e30d8807e378799e0f2c769d54 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.1 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 XDD1_1203 d03b01e30d8807e378799e0f2c769d54 171 SUPERFAMILY SSF63411 4 162 3.11E-65 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 XDD1_1203 d03b01e30d8807e378799e0f2c769d54 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 7.1E-61 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 XDD1_2723 7ee1abbb42e50d5e5ed46848015a8890 293 SUPERFAMILY SSF53686 4 291 1.57E-89 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XDD1_2723 7ee1abbb42e50d5e5ed46848015a8890 293 Gene3D G3DSA:3.40.50.1100 8 288 3.4E-110 T 15-10-2018 XDD1_2723 7ee1abbb42e50d5e5ed46848015a8890 293 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 281 1.4E-66 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XDD1_2723 7ee1abbb42e50d5e5ed46848015a8890 293 TIGRFAM TIGR01138 cysM: cysteine synthase B 4 292 5.5E-150 T 15-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 XDD1_2723 7ee1abbb42e50d5e5ed46848015a8890 293 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 7.6E-122 T 15-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 XDD1_2723 7ee1abbb42e50d5e5ed46848015a8890 293 Gene3D G3DSA:3.40.50.1100 35 140 3.4E-110 T 15-10-2018 XDD1_2723 7ee1abbb42e50d5e5ed46848015a8890 293 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 15-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 XDD1_3475 e6530f6d45dc1a705862c4d52e3e11e6 419 Gene3D G3DSA:3.40.47.10 1 266 2.8E-58 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_3475 e6530f6d45dc1a705862c4d52e3e11e6 419 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 265 374 4.5E-29 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal XDD1_3475 e6530f6d45dc1a705862c4d52e3e11e6 419 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 13 257 1.2E-40 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XDD1_3475 e6530f6d45dc1a705862c4d52e3e11e6 419 SUPERFAMILY SSF53901 13 262 2.3E-51 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_3475 e6530f6d45dc1a705862c4d52e3e11e6 419 SUPERFAMILY SSF53901 226 418 3.39E-59 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_3475 e6530f6d45dc1a705862c4d52e3e11e6 419 SMART SM00825 Beta-ketoacyl synthase 15 418 1.3E-11 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XDD1_3475 e6530f6d45dc1a705862c4d52e3e11e6 419 Gene3D G3DSA:3.40.47.10 271 418 2.6E-45 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_3475 e6530f6d45dc1a705862c4d52e3e11e6 419 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 166 182 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site XDD1_3133 5954392566d812ee3fc9c3a041a52f4b 494 Gene3D G3DSA:3.40.605.10 21 485 6.0E-178 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 XDD1_3133 5954392566d812ee3fc9c3a041a52f4b 494 SUPERFAMILY SSF53720 12 490 2.09E-171 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XDD1_3133 5954392566d812ee3fc9c3a041a52f4b 494 Gene3D G3DSA:3.40.309.10 264 457 6.0E-178 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 XDD1_3133 5954392566d812ee3fc9c3a041a52f4b 494 Pfam PF00171 Aldehyde dehydrogenase family 25 487 2.8E-175 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 XDD1_3133 5954392566d812ee3fc9c3a041a52f4b 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 259 266 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 XDD1_1355 cca7b39ee074273dfe87b32183ddb62d 167 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 167 31.379 T 15-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 XDD1_1355 cca7b39ee074273dfe87b32183ddb62d 167 SUPERFAMILY SSF103088 54 166 1.96E-34 T 15-10-2018 IPR036737 OmpA-like domain superfamily XDD1_1355 cca7b39ee074273dfe87b32183ddb62d 167 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 65 167 1.1E-46 T 15-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 XDD1_1355 cca7b39ee074273dfe87b32183ddb62d 167 Gene3D G3DSA:3.30.1330.60 37 167 2.3E-46 T 15-10-2018 IPR036737 OmpA-like domain superfamily XDD1_1355 cca7b39ee074273dfe87b32183ddb62d 167 Pfam PF00691 OmpA family 66 161 4.1E-21 T 15-10-2018 IPR006665 OmpA-like domain XDD1_1355 cca7b39ee074273dfe87b32183ddb62d 167 ProSitePatterns PS01068 OmpA-like domain. 99 143 - T 15-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 XDD1_1355 cca7b39ee074273dfe87b32183ddb62d 167 PRINTS PR01021 OMPA domain signature 112 128 4.4E-18 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XDD1_1355 cca7b39ee074273dfe87b32183ddb62d 167 PRINTS PR01021 OMPA domain signature 97 112 4.4E-18 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XDD1_1355 cca7b39ee074273dfe87b32183ddb62d 167 PRINTS PR01021 OMPA domain signature 67 89 4.4E-18 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XDD1_1828 2eded5e353e22c264a212db4f728d114 95 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 19 69 2.2E-19 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 XDD1_1836 2eded5e353e22c264a212db4f728d114 95 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 19 69 2.2E-19 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 XDD1_3622 2e4ec7792fca0fb936a2eb0cc16d066d 212 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 183 2.6E-31 T 15-10-2018 XDD1_3622 2e4ec7792fca0fb936a2eb0cc16d066d 212 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 184 2.4E-14 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_3622 2e4ec7792fca0fb936a2eb0cc16d066d 212 SUPERFAMILY SSF56784 1 212 4.6E-50 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_3622 2e4ec7792fca0fb936a2eb0cc16d066d 212 Gene3D G3DSA:1.10.150.240 14 86 3.8E-49 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 XDD1_3622 2e4ec7792fca0fb936a2eb0cc16d066d 212 Gene3D G3DSA:3.40.50.1000 2 187 3.8E-49 T 15-10-2018 IPR023214 HAD superfamily XDD1_3622 2e4ec7792fca0fb936a2eb0cc16d066d 212 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 3.4E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_3622 2e4ec7792fca0fb936a2eb0cc16d066d 212 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 3.4E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_3622 2e4ec7792fca0fb936a2eb0cc16d066d 212 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 3.4E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_1422 dc646c06a2b5d6180a2855daa3834db4 711 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 34 696 34.125 T 15-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 XDD1_1422 dc646c06a2b5d6180a2855daa3834db4 711 SMART SM00487 23 333 0.0049 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XDD1_1422 dc646c06a2b5d6180a2855daa3834db4 711 Gene3D G3DSA:3.40.50.300 27 291 1.3E-41 T 15-10-2018 XDD1_1422 dc646c06a2b5d6180a2855daa3834db4 711 SMART SM00488 25 297 4.6E-4 T 15-10-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 XDD1_1422 dc646c06a2b5d6180a2855daa3834db4 711 Pfam PF13307 Helicase C-terminal domain 530 689 2.1E-24 T 15-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 XDD1_1422 dc646c06a2b5d6180a2855daa3834db4 711 SMART SM00491 545 677 1.0E-28 T 15-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 XDD1_1422 dc646c06a2b5d6180a2855daa3834db4 711 Pfam PF06733 DEAD_2 192 263 5.2E-8 T 15-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 XDD1_1422 dc646c06a2b5d6180a2855daa3834db4 711 Gene3D G3DSA:3.40.50.300 500 693 6.3E-21 T 15-10-2018 XDD1_1422 dc646c06a2b5d6180a2855daa3834db4 711 SUPERFAMILY SSF52540 14 672 1.22E-16 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0200 570be24649296fa747e6e3d92cd77624 71 Pfam PF01197 Ribosomal protein L31 1 64 1.6E-29 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0200 570be24649296fa747e6e3d92cd77624 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 3.2E-33 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0200 570be24649296fa747e6e3d92cd77624 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 30.186 T 15-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0200 570be24649296fa747e6e3d92cd77624 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0200 570be24649296fa747e6e3d92cd77624 71 SUPERFAMILY SSF143800 1 66 1.96E-26 T 15-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0200 570be24649296fa747e6e3d92cd77624 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 3.2E-22 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0200 570be24649296fa747e6e3d92cd77624 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 3.2E-22 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0200 570be24649296fa747e6e3d92cd77624 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.2E-22 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0200 570be24649296fa747e6e3d92cd77624 71 Gene3D G3DSA:2.30.170.50 1 70 3.3E-32 T 15-10-2018 XDD1_2777 7779a7760c4d6ac01c6b15de33194570 782 Gene3D G3DSA:1.10.3810.10 57 250 5.2E-55 T 15-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_2777 7779a7760c4d6ac01c6b15de33194570 782 Pfam PF00912 Transglycosylase 63 228 1.5E-50 T 15-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_2777 7779a7760c4d6ac01c6b15de33194570 782 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 698 778 2.8E-13 T 15-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_2777 7779a7760c4d6ac01c6b15de33194570 782 SUPERFAMILY SSF56601 210 648 8.85E-94 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XDD1_2777 7779a7760c4d6ac01c6b15de33194570 782 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 41 781 9.5E-251 T 15-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_2777 7779a7760c4d6ac01c6b15de33194570 782 Gene3D G3DSA:3.40.710.10 251 607 5.9E-70 T 15-10-2018 XDD1_2777 7779a7760c4d6ac01c6b15de33194570 782 SUPERFAMILY SSF53955 41 261 3.09E-64 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily XDD1_2777 7779a7760c4d6ac01c6b15de33194570 782 Pfam PF00905 Penicillin binding protein transpeptidase domain 304 523 1.8E-14 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XDD1_3777 ea1fd9e127877e6b56fa283a3f4e49bb 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 316 1.1E-25 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 XDD1_3777 ea1fd9e127877e6b56fa283a3f4e49bb 326 SUPERFAMILY SSF52540 3 253 8.8E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3777 ea1fd9e127877e6b56fa283a3f4e49bb 326 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_3777 ea1fd9e127877e6b56fa283a3f4e49bb 326 SMART SM00382 32 239 4.8E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3777 ea1fd9e127877e6b56fa283a3f4e49bb 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 1.6E-17 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 XDD1_3777 ea1fd9e127877e6b56fa283a3f4e49bb 326 Gene3D G3DSA:3.40.50.300 1 323 3.8E-94 T 15-10-2018 XDD1_3777 ea1fd9e127877e6b56fa283a3f4e49bb 326 Pfam PF00005 ABC transporter 24 181 6.4E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_3922 33d5648f7637ca675a01f6aea2006350 367 SUPERFAMILY SSF54292 247 364 7.14E-28 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 XDD1_3922 33d5648f7637ca675a01f6aea2006350 367 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 60 67 3.8E-7 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_3922 33d5648f7637ca675a01f6aea2006350 367 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 126 145 3.8E-7 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_3922 33d5648f7637ca675a01f6aea2006350 367 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 151 160 3.8E-7 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_3922 33d5648f7637ca675a01f6aea2006350 367 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 41 51 3.8E-7 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_3922 33d5648f7637ca675a01f6aea2006350 367 Gene3D G3DSA:3.10.20.30 258 367 1.3E-28 T 15-10-2018 IPR012675 Beta-grasp domain superfamily XDD1_3922 33d5648f7637ca675a01f6aea2006350 367 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 314 322 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 XDD1_3922 33d5648f7637ca675a01f6aea2006350 367 Pfam PF00175 Oxidoreductase NAD-binding domain 128 236 4.3E-15 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 XDD1_3922 33d5648f7637ca675a01f6aea2006350 367 SUPERFAMILY SSF63380 5 111 5.11E-26 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XDD1_3922 33d5648f7637ca675a01f6aea2006350 367 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 281 356 1.5E-15 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 XDD1_3922 33d5648f7637ca675a01f6aea2006350 367 PRINTS PR00410 Phenol hydroxylase reductase family signature 126 145 1.0E-7 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 XDD1_3922 33d5648f7637ca675a01f6aea2006350 367 PRINTS PR00410 Phenol hydroxylase reductase family signature 41 53 1.0E-7 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 XDD1_3922 33d5648f7637ca675a01f6aea2006350 367 PRINTS PR00410 Phenol hydroxylase reductase family signature 151 160 1.0E-7 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 XDD1_3922 33d5648f7637ca675a01f6aea2006350 367 PRINTS PR00410 Phenol hydroxylase reductase family signature 222 230 1.0E-7 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 XDD1_3922 33d5648f7637ca675a01f6aea2006350 367 SUPERFAMILY SSF52343 99 252 1.31E-32 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XDD1_3922 33d5648f7637ca675a01f6aea2006350 367 Gene3D G3DSA:3.40.50.80 121 257 2.9E-29 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XDD1_3922 33d5648f7637ca675a01f6aea2006350 367 Gene3D G3DSA:2.40.30.10 7 109 5.8E-24 T 15-10-2018 XDD1_3922 33d5648f7637ca675a01f6aea2006350 367 Pfam PF00970 Oxidoreductase FAD-binding domain 13 108 1.7E-12 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 XDD1_3922 33d5648f7637ca675a01f6aea2006350 367 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 9 366 6.5E-141 T 15-10-2018 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 XDD1_3780 87f2f2b4181f1fc735ab3e2ec2429920 536 Gene3D G3DSA:3.90.76.10 51 211 3.8E-190 T 15-10-2018 XDD1_3780 87f2f2b4181f1fc735ab3e2ec2429920 536 Gene3D G3DSA:3.10.105.10 293 511 3.8E-190 T 15-10-2018 XDD1_3780 87f2f2b4181f1fc735ab3e2ec2429920 536 Gene3D G3DSA:3.40.190.10 212 524 3.8E-190 T 15-10-2018 XDD1_3780 87f2f2b4181f1fc735ab3e2ec2429920 536 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 80 102 - T 15-10-2018 IPR023765 Solute-binding protein family 5, conserved site XDD1_3780 87f2f2b4181f1fc735ab3e2ec2429920 536 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 454 7.9E-108 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain XDD1_3780 87f2f2b4181f1fc735ab3e2ec2429920 536 SUPERFAMILY SSF53850 30 534 9.23E-156 T 15-10-2018 XDD1_3780 87f2f2b4181f1fc735ab3e2ec2429920 536 PIRSF PIRSF002741 17 536 6.8E-120 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 XDD1_2571 32f388efc73e4ec44b57f884fb155798 447 Gene3D G3DSA:3.60.120.10 3 445 9.0E-143 T 15-10-2018 IPR005801 ADC synthase GO:0009058 XDD1_2571 32f388efc73e4ec44b57f884fb155798 447 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 120 440 1.3E-96 T 15-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 XDD1_2571 32f388efc73e4ec44b57f884fb155798 447 SUPERFAMILY SSF56322 33 441 8.9E-93 T 15-10-2018 IPR005801 ADC synthase GO:0009058 XDD1_2571 32f388efc73e4ec44b57f884fb155798 447 Hamap MF_01935 Isochorismate synthase MenF [menF]. 7 443 29.328 T 15-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 XDD1_2571 32f388efc73e4ec44b57f884fb155798 447 Pfam PF00425 chorismate binding enzyme 183 433 9.5E-63 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal XDD1_1183 5e2c540adb534d6d9ea291404af270eb 492 Pfam PF00171 Aldehyde dehydrogenase family 20 481 1.5E-174 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 XDD1_1183 5e2c540adb534d6d9ea291404af270eb 492 Gene3D G3DSA:3.40.605.10 3 256 6.9E-99 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 XDD1_1183 5e2c540adb534d6d9ea291404af270eb 492 Gene3D G3DSA:3.40.309.10 257 487 5.7E-78 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 XDD1_1183 5e2c540adb534d6d9ea291404af270eb 492 SUPERFAMILY SSF53720 6 486 7.98E-167 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XDD1_1183 5e2c540adb534d6d9ea291404af270eb 492 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 479 1.3E-224 T 15-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 XDD1_1183 5e2c540adb534d6d9ea291404af270eb 492 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 492 56.565 T 15-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 XDD1_1183 5e2c540adb534d6d9ea291404af270eb 492 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 253 260 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 XDD1_1183 5e2c540adb534d6d9ea291404af270eb 492 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 281 292 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 XDD1_3640 10d592d964d17e4c9e44df0a94a2a6ae 1408 Gene3D G3DSA:1.10.1790.20 1135 1314 3.2E-60 T 15-10-2018 XDD1_3640 10d592d964d17e4c9e44df0a94a2a6ae 1408 Gene3D G3DSA:2.40.50.100 1023 1126 2.6E-29 T 15-10-2018 XDD1_3640 10d592d964d17e4c9e44df0a94a2a6ae 1408 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1376 18.946 T 15-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3640 10d592d964d17e4c9e44df0a94a2a6ae 1408 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 8.1E-19 T 15-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3640 10d592d964d17e4c9e44df0a94a2a6ae 1408 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 3.1E-77 T 15-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3640 10d592d964d17e4c9e44df0a94a2a6ae 1408 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 15-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3640 10d592d964d17e4c9e44df0a94a2a6ae 1408 Gene3D G3DSA:1.10.40.90 374 416 2.0E-21 T 15-10-2018 XDD1_3640 10d592d964d17e4c9e44df0a94a2a6ae 1408 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 6.7E-25 T 15-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3640 10d592d964d17e4c9e44df0a94a2a6ae 1408 Gene3D G3DSA:2.40.50.100 948 1022 3.8E-25 T 15-10-2018 XDD1_3640 10d592d964d17e4c9e44df0a94a2a6ae 1408 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 4.6E-89 T 15-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3640 10d592d964d17e4c9e44df0a94a2a6ae 1408 Gene3D G3DSA:1.10.274.100 490 637 1.1E-30 T 15-10-2018 XDD1_3640 10d592d964d17e4c9e44df0a94a2a6ae 1408 SUPERFAMILY SSF64484 16 1364 0.0 T 15-10-2018 XDD1_3640 10d592d964d17e4c9e44df0a94a2a6ae 1408 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.9E-27 T 15-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3640 10d592d964d17e4c9e44df0a94a2a6ae 1408 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 15-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3640 10d592d964d17e4c9e44df0a94a2a6ae 1408 Gene3D G3DSA:1.10.150.390 1316 1377 2.9E-28 T 15-10-2018 XDD1_3640 10d592d964d17e4c9e44df0a94a2a6ae 1408 SMART SM00663 235 514 2.7E-184 T 15-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3640 10d592d964d17e4c9e44df0a94a2a6ae 1408 Gene3D G3DSA:2.40.50.100 1151 1215 3.2E-60 T 15-10-2018 XDD1_3640 10d592d964d17e4c9e44df0a94a2a6ae 1408 Gene3D G3DSA:1.10.132.30 638 790 6.7E-66 T 15-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_0264 5c0664152fe5d0894d9284574b4ed4e2 287 Pfam PF01177 Asp/Glu/Hydantoin racemase 28 239 6.1E-28 T 15-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 XDD1_0264 5c0664152fe5d0894d9284574b4ed4e2 287 Gene3D G3DSA:3.40.50.1860 30 266 3.7E-92 T 15-10-2018 XDD1_0264 5c0664152fe5d0894d9284574b4ed4e2 287 Gene3D G3DSA:3.40.50.1860 118 231 3.7E-92 T 15-10-2018 XDD1_0264 5c0664152fe5d0894d9284574b4ed4e2 287 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 93 101 - T 15-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 XDD1_0264 5c0664152fe5d0894d9284574b4ed4e2 287 SUPERFAMILY SSF53681 131 283 8.5E-35 T 15-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 XDD1_0264 5c0664152fe5d0894d9284574b4ed4e2 287 SUPERFAMILY SSF53681 28 129 3.07E-32 T 15-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 XDD1_0264 5c0664152fe5d0894d9284574b4ed4e2 287 TIGRFAM TIGR00067 glut_race: glutamate racemase 28 266 1.4E-81 T 15-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 XDD1_0264 5c0664152fe5d0894d9284574b4ed4e2 287 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 204 214 - T 15-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 XDD1_0264 5c0664152fe5d0894d9284574b4ed4e2 287 Hamap MF_00258 Glutamate racemase [murI]. 26 278 33.964 T 15-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 XDD1_0670 f6eacd951aae82b65fbdbc4fa89e188b 347 Pfam PF13384 Homeodomain-like domain 26 73 4.0E-10 T 15-10-2018 XDD1_0670 f6eacd951aae82b65fbdbc4fa89e188b 347 SUPERFAMILY SSF46689 14 140 1.68E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0670 f6eacd951aae82b65fbdbc4fa89e188b 347 Pfam PF13358 DDE superfamily endonuclease 177 310 4.7E-28 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0670 f6eacd951aae82b65fbdbc4fa89e188b 347 Gene3D G3DSA:3.30.420.470 155 335 2.8E-12 T 15-10-2018 XDD1_0670 f6eacd951aae82b65fbdbc4fa89e188b 347 Pfam PF13592 Winged helix-turn helix 108 156 1.0E-6 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_3357 e3faf65676bb7505d4e03c92df3b1f8c 365 Gene3D G3DSA:2.40.40.10 53 353 1.5E-152 T 15-10-2018 IPR036908 RlpA-like domain superfamily XDD1_3357 e3faf65676bb7505d4e03c92df3b1f8c 365 SUPERFAMILY SSF50685 24 354 4.19E-111 T 15-10-2018 IPR036908 RlpA-like domain superfamily XDD1_3357 e3faf65676bb7505d4e03c92df3b1f8c 365 SMART SM00925 124 257 4.3E-68 T 15-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 XDD1_3357 e3faf65676bb7505d4e03c92df3b1f8c 365 PIRSF PIRSF019422 2 364 2.1E-82 T 15-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A XDD1_3357 e3faf65676bb7505d4e03c92df3b1f8c 365 Pfam PF06725 3D domain 277 354 2.2E-24 T 15-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 XDD1_3357 e3faf65676bb7505d4e03c92df3b1f8c 365 Gene3D G3DSA:2.40.240.50 124 262 1.5E-152 T 15-10-2018 XDD1_3357 e3faf65676bb7505d4e03c92df3b1f8c 365 Pfam PF03562 MltA specific insert domain 101 257 1.2E-39 T 15-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 XDD1_0068 9869782cd90a778e64f9b42d401b61f6 272 Gene3D G3DSA:1.10.1020.10 57 156 2.8E-88 T 15-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 XDD1_0068 9869782cd90a778e64f9b42d401b61f6 272 Gene3D G3DSA:3.40.50.150 7 238 2.8E-88 T 15-10-2018 XDD1_0068 9869782cd90a778e64f9b42d401b61f6 272 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 1.5E-100 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XDD1_0068 9869782cd90a778e64f9b42d401b61f6 272 SUPERFAMILY SSF53335 5 268 5.98E-75 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_0068 9869782cd90a778e64f9b42d401b61f6 272 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 7.9E-74 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XDD1_0068 9869782cd90a778e64f9b42d401b61f6 272 PIRSF PIRSF000398 1 272 4.1E-68 T 15-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 XDD1_0068 9869782cd90a778e64f9b42d401b61f6 272 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XDD1_0068 9869782cd90a778e64f9b42d401b61f6 272 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 1.5E-19 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XDD1_0068 9869782cd90a778e64f9b42d401b61f6 272 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 1.5E-19 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XDD1_0068 9869782cd90a778e64f9b42d401b61f6 272 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 1.5E-19 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XDD1_0068 9869782cd90a778e64f9b42d401b61f6 272 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 1.5E-19 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XDD1_0094 daea9c85c601e558cfaa2a7af1370d92 143 Gene3D G3DSA:3.40.50.620 2 142 1.1E-51 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_0094 daea9c85c601e558cfaa2a7af1370d92 143 Pfam PF00582 Universal stress protein family 3 138 1.3E-21 T 15-10-2018 IPR006016 UspA XDD1_0094 daea9c85c601e558cfaa2a7af1370d92 143 SUPERFAMILY SSF52402 3 139 7.79E-33 T 15-10-2018 XDD1_0094 daea9c85c601e558cfaa2a7af1370d92 143 PIRSF PIRSF006276 1 141 1.1E-53 T 15-10-2018 IPR006015 Universal stress protein A XDD1_1804 dbee36739d2c1d9004fe9dce36ed01fd 361 Gene3D G3DSA:3.30.360.10 136 304 5.4E-8 T 15-10-2018 XDD1_1804 dbee36739d2c1d9004fe9dce36ed01fd 361 Gene3D G3DSA:3.40.50.720 5 135 7.7E-8 T 15-10-2018 XDD1_1804 dbee36739d2c1d9004fe9dce36ed01fd 361 SUPERFAMILY SSF51735 3 129 1.05E-8 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_3546 c17fe19122abf7a40a33f6e768e996f4 481 SUPERFAMILY SSF111283 18 480 4.84E-135 T 15-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 XDD1_3546 c17fe19122abf7a40a33f6e768e996f4 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 1.1E-70 T 15-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 XDD1_3546 c17fe19122abf7a40a33f6e768e996f4 481 PIRSF PIRSF004919 14 481 3.3E-150 T 15-10-2018 IPR025502 TldD XDD1_3546 c17fe19122abf7a40a33f6e768e996f4 481 Gene3D G3DSA:3.30.2290.10 12 240 1.1E-19 T 15-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal XDD1_3325 2c2672b8838420f92c6f668f64954e3c 444 Gene3D G3DSA:2.40.30.170 327 420 7.4E-12 T 15-10-2018 XDD1_3325 2c2672b8838420f92c6f668f64954e3c 444 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 251 386 4.5E-8 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XDD1_3325 2c2672b8838420f92c6f668f64954e3c 444 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 24 443 3.1E-120 T 15-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 XDD1_3325 2c2672b8838420f92c6f668f64954e3c 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 34 57 5.6E-64 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XDD1_3325 2c2672b8838420f92c6f668f64954e3c 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 308 329 5.6E-64 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XDD1_3325 2c2672b8838420f92c6f668f64954e3c 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 5.6E-64 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XDD1_3325 2c2672b8838420f92c6f668f64954e3c 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 365 388 5.6E-64 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XDD1_3325 2c2672b8838420f92c6f668f64954e3c 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 341 365 5.6E-64 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XDD1_3325 2c2672b8838420f92c6f668f64954e3c 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 423 443 5.6E-64 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XDD1_3325 2c2672b8838420f92c6f668f64954e3c 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 408 423 5.6E-64 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XDD1_3325 2c2672b8838420f92c6f668f64954e3c 444 Gene3D G3DSA:1.10.287.470 98 121 2.9E-8 T 15-10-2018 XDD1_3325 2c2672b8838420f92c6f668f64954e3c 444 Gene3D G3DSA:2.40.50.100 64 97 2.9E-8 T 15-10-2018 XDD1_3325 2c2672b8838420f92c6f668f64954e3c 444 Gene3D G3DSA:2.40.50.100 289 326 7.4E-12 T 15-10-2018 XDD1_3325 2c2672b8838420f92c6f668f64954e3c 444 Pfam PF00529 HlyD membrane-fusion protein of T1SS 37 397 8.5E-18 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 XDD1_3325 2c2672b8838420f92c6f668f64954e3c 444 Gene3D G3DSA:1.10.287.470 242 288 7.4E-12 T 15-10-2018 XDD1_3325 2c2672b8838420f92c6f668f64954e3c 444 SUPERFAMILY SSF111369 66 121 2.88E-6 T 15-10-2018 XDD1_3325 2c2672b8838420f92c6f668f64954e3c 444 ProSitePatterns PS00543 HlyD family secretion proteins signature. 408 430 - T 15-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 XDD1_0560 34253081e98de5d9c9eec02fec46c9e2 124 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 10 118 6.2E-15 T 15-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 XDD1_0560 34253081e98de5d9c9eec02fec46c9e2 124 Gene3D G3DSA:2.30.30.110 9 120 9.7E-28 T 15-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor XDD1_0560 34253081e98de5d9c9eec02fec46c9e2 124 SUPERFAMILY SSF50118 6 119 6.98E-21 T 15-10-2018 XDD1_1460 70442281209a7d0b5524ef59a8a15bb3 110 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 25 104 1.6E-25 T 15-10-2018 IPR019110 Uncharacterised protein family, RAQPRD XDD1_1460 70442281209a7d0b5524ef59a8a15bb3 110 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 14 106 1.2E-24 T 15-10-2018 IPR019110 Uncharacterised protein family, RAQPRD XDD1_1569 3c1bee20066be886fe27347706cd25d5 347 SMART SM00870 25 341 3.1E-128 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 XDD1_1569 3c1bee20066be886fe27347706cd25d5 347 PIRSF PIRSF500176 22 347 4.0E-79 T 15-10-2018 XDD1_1569 3c1bee20066be886fe27347706cd25d5 347 Gene3D G3DSA:3.40.50.40 234 347 2.3E-42 T 15-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 XDD1_1569 3c1bee20066be886fe27347706cd25d5 347 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 15-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 XDD1_1569 3c1bee20066be886fe27347706cd25d5 347 SUPERFAMILY SSF53774 23 346 1.2E-100 T 15-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 XDD1_1569 3c1bee20066be886fe27347706cd25d5 347 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 28 36 - T 15-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 XDD1_1569 3c1bee20066be886fe27347706cd25d5 347 Pfam PF00710 Asparaginase, N-terminal 25 214 3.6E-57 T 15-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 XDD1_1569 3c1bee20066be886fe27347706cd25d5 347 PRINTS PR00139 Asparaginase/glutaminase family signature 281 299 4.0E-23 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 XDD1_1569 3c1bee20066be886fe27347706cd25d5 347 PRINTS PR00139 Asparaginase/glutaminase family signature 26 37 4.0E-23 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 XDD1_1569 3c1bee20066be886fe27347706cd25d5 347 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 4.0E-23 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 XDD1_1569 3c1bee20066be886fe27347706cd25d5 347 Gene3D G3DSA:3.40.50.1170 23 233 4.3E-78 T 15-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 XDD1_1569 3c1bee20066be886fe27347706cd25d5 347 PIRSF PIRSF001220 21 347 8.4E-89 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 XDD1_1569 3c1bee20066be886fe27347706cd25d5 347 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 5 347 5.0E-144 T 15-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 XDD1_1901 7d969bd065e0ba1d3b72c6343021b08c 864 Gene3D G3DSA:2.160.20.80 527 654 1.8E-19 T 15-10-2018 XDD1_1901 7d969bd065e0ba1d3b72c6343021b08c 864 SUPERFAMILY SSF141571 537 673 4.61E-25 T 15-10-2018 XDD1_1901 7d969bd065e0ba1d3b72c6343021b08c 864 Gene3D G3DSA:2.160.20.100 788 851 1.3E-7 T 15-10-2018 XDD1_1901 7d969bd065e0ba1d3b72c6343021b08c 864 Pfam PF00805 Pentapeptide repeats (8 copies) 552 589 6.7E-9 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_1901 7d969bd065e0ba1d3b72c6343021b08c 864 Pfam PF00805 Pentapeptide repeats (8 copies) 798 836 7.4E-7 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_1901 7d969bd065e0ba1d3b72c6343021b08c 864 Pfam PF00805 Pentapeptide repeats (8 copies) 746 778 0.011 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_1901 7d969bd065e0ba1d3b72c6343021b08c 864 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 21 301 7.2E-83 T 15-10-2018 IPR018683 Domain of unknown function DUF2169 XDD1_1901 7d969bd065e0ba1d3b72c6343021b08c 864 Pfam PF13599 Pentapeptide repeats (9 copies) 638 712 7.1E-10 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_1901 7d969bd065e0ba1d3b72c6343021b08c 864 Gene3D G3DSA:2.160.20.100 655 787 6.1E-21 T 15-10-2018 XDD1_1901 7d969bd065e0ba1d3b72c6343021b08c 864 SUPERFAMILY SSF141571 722 848 3.3E-20 T 15-10-2018 XDD1_0598 8a4f7afcb9f42ec1e9c0b1e43aa7bfed 915 SMART SM00487 285 520 0.0014 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XDD1_0598 8a4f7afcb9f42ec1e9c0b1e43aa7bfed 915 Gene3D G3DSA:3.40.50.300 532 684 1.9E-8 T 15-10-2018 XDD1_0598 8a4f7afcb9f42ec1e9c0b1e43aa7bfed 915 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 308 682 2.1E-58 T 15-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core XDD1_0598 8a4f7afcb9f42ec1e9c0b1e43aa7bfed 915 Pfam PF04851 Type III restriction enzyme, res subunit 307 467 7.7E-5 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XDD1_0598 8a4f7afcb9f42ec1e9c0b1e43aa7bfed 915 SUPERFAMILY SSF52540 305 682 7.41E-24 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0598 8a4f7afcb9f42ec1e9c0b1e43aa7bfed 915 Gene3D G3DSA:1.10.3210.30 4 285 2.5E-52 T 15-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily XDD1_0598 8a4f7afcb9f42ec1e9c0b1e43aa7bfed 915 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 31 235 6.6E-31 T 15-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain XDD1_0030 500f22f8586dbabad4f7625bf0f9e4d1 614 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 614 1.6E-261 T 15-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 XDD1_0030 500f22f8586dbabad4f7625bf0f9e4d1 614 Pfam PF13522 Glutamine amidotransferase domain 71 187 2.0E-22 T 15-10-2018 XDD1_0030 500f22f8586dbabad4f7625bf0f9e4d1 614 Pfam PF01380 SIS domain 467 596 3.1E-27 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XDD1_0030 500f22f8586dbabad4f7625bf0f9e4d1 614 Pfam PF01380 SIS domain 294 423 2.4E-31 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XDD1_0030 500f22f8586dbabad4f7625bf0f9e4d1 614 Gene3D G3DSA:3.40.50.10490 254 613 3.8E-152 T 15-10-2018 XDD1_0030 500f22f8586dbabad4f7625bf0f9e4d1 614 SUPERFAMILY SSF56235 2 238 6.52E-74 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XDD1_0030 500f22f8586dbabad4f7625bf0f9e4d1 614 Gene3D G3DSA:3.40.50.10490 452 599 3.8E-152 T 15-10-2018 XDD1_0030 500f22f8586dbabad4f7625bf0f9e4d1 614 Gene3D G3DSA:3.60.20.10 2 246 2.3E-82 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XDD1_0030 500f22f8586dbabad4f7625bf0f9e4d1 614 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 614 40.895 T 15-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 XDD1_0030 500f22f8586dbabad4f7625bf0f9e4d1 614 SUPERFAMILY SSF53697 250 614 7.05E-112 T 15-10-2018 XDD1_3594 ce015fdcea6cdbcdace1a5d3d3277048 686 Gene3D G3DSA:2.40.170.20 167 686 8.1E-85 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XDD1_3594 ce015fdcea6cdbcdace1a5d3d3277048 686 Gene3D G3DSA:2.170.130.10 57 166 5.4E-31 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XDD1_3594 ce015fdcea6cdbcdace1a5d3d3277048 686 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 161 1.6E-19 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain XDD1_3594 ce015fdcea6cdbcdace1a5d3d3277048 686 Pfam PF00593 TonB dependent receptor 262 685 4.7E-37 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XDD1_3594 ce015fdcea6cdbcdace1a5d3d3277048 686 SUPERFAMILY SSF56935 67 686 2.98E-76 T 15-10-2018 XDD1_1126 da0864eeef82f3f2e2e43d04b78ad7d3 188 Pfam PF03230 Antirestriction protein 93 183 1.6E-27 T 15-10-2018 IPR004914 Antirestriction protein XDD1_1126 da0864eeef82f3f2e2e43d04b78ad7d3 188 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 91 183 6.0E-9 T 15-10-2018 IPR004914 Antirestriction protein XDD1_1126 da0864eeef82f3f2e2e43d04b78ad7d3 188 Gene3D G3DSA:1.10.472.120 65 183 1.5E-23 T 15-10-2018 XDD1_0203 890eec5324c142dd32863184e3c1958e 811 ProSitePatterns PS00324 Aspartokinase signature. 15 23 - T 15-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XDD1_0203 890eec5324c142dd32863184e3c1958e 811 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 466 601 9.4E-18 T 15-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 XDD1_0203 890eec5324c142dd32863184e3c1958e 811 SUPERFAMILY SSF55347 609 792 2.29E-46 T 15-10-2018 XDD1_0203 890eec5324c142dd32863184e3c1958e 811 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 16 454 3.6E-68 T 15-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XDD1_0203 890eec5324c142dd32863184e3c1958e 811 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 655 677 - T 15-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 XDD1_0203 890eec5324c142dd32863184e3c1958e 811 Gene3D G3DSA:3.40.50.720 461 807 3.9E-104 T 15-10-2018 XDD1_0203 890eec5324c142dd32863184e3c1958e 811 SUPERFAMILY SSF51735 458 631 6.13E-29 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0203 890eec5324c142dd32863184e3c1958e 811 PIRSF PIRSF000727 13 811 4.6E-288 T 15-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XDD1_0203 890eec5324c142dd32863184e3c1958e 811 SUPERFAMILY SSF53633 13 300 8.51E-59 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XDD1_0203 890eec5324c142dd32863184e3c1958e 811 Pfam PF00742 Homoserine dehydrogenase 612 804 1.8E-43 T 15-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 XDD1_0203 890eec5324c142dd32863184e3c1958e 811 Gene3D G3DSA:3.40.1160.10 16 299 6.9E-75 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XDD1_0203 890eec5324c142dd32863184e3c1958e 811 Gene3D G3DSA:3.30.2130.10 309 457 4.0E-7 T 15-10-2018 XDD1_0203 890eec5324c142dd32863184e3c1958e 811 Gene3D G3DSA:3.30.360.10 620 790 3.9E-104 T 15-10-2018 XDD1_0203 890eec5324c142dd32863184e3c1958e 811 Pfam PF00696 Amino acid kinase family 13 285 6.4E-44 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XDD1_0203 890eec5324c142dd32863184e3c1958e 811 Gene3D G3DSA:1.20.120.1320 52 146 6.9E-75 T 15-10-2018 XDD1_0019 ccdd45e6d84c28b526850516cd1f5bed 734 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 574 731 6.2E-13 T 15-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 XDD1_0019 ccdd45e6d84c28b526850516cd1f5bed 734 TIGRFAM TIGR02688 TIGR02688: TIGR02688 family protein 71 517 8.3E-186 T 15-10-2018 IPR014061 Conserved hypothetical protein CHP02688 XDD1_0019 ccdd45e6d84c28b526850516cd1f5bed 734 Gene3D G3DSA:3.30.230.10 555 734 1.6E-20 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XDD1_0019 ccdd45e6d84c28b526850516cd1f5bed 734 SUPERFAMILY SSF52540 277 476 1.44E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0019 ccdd45e6d84c28b526850516cd1f5bed 734 TIGRFAM TIGR02653 Lon_rel_chp: conserved hypothetical protein 65 734 0.0 T 15-10-2018 IPR013473 Conserved hypothetical protein CHP02653, peptidase S16 non-peptidase homologue XDD1_0019 ccdd45e6d84c28b526850516cd1f5bed 734 Pfam PF13337 Putative ATP-dependent Lon protease 73 526 2.3E-206 T 15-10-2018 IPR014061 Conserved hypothetical protein CHP02688 XDD1_0019 ccdd45e6d84c28b526850516cd1f5bed 734 SUPERFAMILY SSF54211 555 733 2.58E-22 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_3732 9508993b99257236560a8ac5de6e3ed5 175 SUPERFAMILY SSF160631 32 163 1.96E-18 T 15-10-2018 XDD1_3732 9508993b99257236560a8ac5de6e3ed5 175 Gene3D G3DSA:3.40.1580.10 31 160 1.1E-10 T 15-10-2018 IPR037883 Knr4/Smi1-like domain superfamily XDD1_3732 9508993b99257236560a8ac5de6e3ed5 175 Pfam PF14568 SMI1-KNR4 cell-wall 32 148 1.4E-9 T 15-10-2018 XDD1_0069 19523e37d4efdedef6f72e9e3b89bab3 328 Pfam PF05036 Sporulation related domain 245 318 4.0E-6 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 XDD1_0069 19523e37d4efdedef6f72e9e3b89bab3 328 Hamap MF_02021 Cell division protein DamX [damX]. 1 328 23.074 T 15-10-2018 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 XDD1_0069 19523e37d4efdedef6f72e9e3b89bab3 328 Gene3D G3DSA:3.30.70.1070 222 327 6.7E-31 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XDD1_3102 c14fa27679c3f7e12f9dab3cee82b415 285 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 62 1.1E-7 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XDD1_3102 c14fa27679c3f7e12f9dab3cee82b415 285 Pfam PF02569 Pantoate-beta-alanine ligase 3 279 1.3E-99 T 15-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 XDD1_3102 c14fa27679c3f7e12f9dab3cee82b415 285 Hamap MF_00158 Pantothenate synthetase [panC]. 2 281 38.782 T 15-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 XDD1_3102 c14fa27679c3f7e12f9dab3cee82b415 285 SUPERFAMILY SSF52374 1 281 9.29E-103 T 15-10-2018 XDD1_3102 c14fa27679c3f7e12f9dab3cee82b415 285 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 1.9E-109 T 15-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 XDD1_3102 c14fa27679c3f7e12f9dab3cee82b415 285 Gene3D G3DSA:3.40.50.620 1 180 1.5E-78 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_3102 c14fa27679c3f7e12f9dab3cee82b415 285 Gene3D G3DSA:3.30.1300.10 181 284 1.4E-29 T 15-10-2018 XDD1_1230 a70e91fd775eba6c0319cd86b9b8cc6e 119 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 37 113 2.8E-8 T 15-10-2018 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein XDD1_2018 bf38275e62b4f170fe47389fed05a39d 315 Gene3D G3DSA:3.40.50.720 97 281 7.3E-107 T 15-10-2018 XDD1_2018 bf38275e62b4f170fe47389fed05a39d 315 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 280 4.2E-41 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 XDD1_2018 bf38275e62b4f170fe47389fed05a39d 315 SUPERFAMILY SSF51735 101 281 2.4E-43 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2018 bf38275e62b4f170fe47389fed05a39d 315 Gene3D G3DSA:3.40.50.720 17 310 7.3E-107 T 15-10-2018 XDD1_1270 5a4d583dd6d7efa506549a23e43a6eb9 374 Pfam PF01098 Cell cycle protein 25 368 4.3E-123 T 15-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_1270 5a4d583dd6d7efa506549a23e43a6eb9 374 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 325 349 - T 15-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_1270 5a4d583dd6d7efa506549a23e43a6eb9 374 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 21 368 9.3E-138 T 15-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_1270 5a4d583dd6d7efa506549a23e43a6eb9 374 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 15 370 29.126 T 15-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_1676 d71ef684a0352072767078269597bbe1 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.8E-16 T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 XDD1_1676 d71ef684a0352072767078269597bbe1 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 6.7E-61 T 15-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 XDD1_1676 d71ef684a0352072767078269597bbe1 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 XDD1_1676 d71ef684a0352072767078269597bbe1 182 PIRSF PIRSF000847 1 181 1.3E-44 T 15-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 XDD1_1676 d71ef684a0352072767078269597bbe1 182 Gene3D G3DSA:1.20.120.1760 4 175 5.7E-15 T 15-10-2018 XDD1_3848 fbbb2f10eb6c214a3909c79be5511ffb 159 SUPERFAMILY SSF141452 2 158 3.4E-33 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_3848 fbbb2f10eb6c214a3909c79be5511ffb 159 Gene3D G3DSA:2.30.110.20 2 158 8.5E-51 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_3848 fbbb2f10eb6c214a3909c79be5511ffb 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 156 4.2E-61 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_3848 fbbb2f10eb6c214a3909c79be5511ffb 159 Pfam PF05638 Type VI secretion system effector, Hcp 8 143 1.5E-20 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_3797 40c23f20e829dd3cee9dc041b2b88c2b 418 Gene3D G3DSA:3.40.640.10 1 414 9.1E-145 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_3797 40c23f20e829dd3cee9dc041b2b88c2b 418 SUPERFAMILY SSF53383 26 408 3.85E-58 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_3797 40c23f20e829dd3cee9dc041b2b88c2b 418 Pfam PF00155 Aminotransferase class I and II 67 391 1.3E-20 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XDD1_2440 118e31cc42e057907c502a6249c8ffb7 597 Gene3D G3DSA:3.40.50.1820 409 593 5.2E-13 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2440 118e31cc42e057907c502a6249c8ffb7 597 SUPERFAMILY SSF69322 64 354 8.5E-7 T 15-10-2018 XDD1_2440 118e31cc42e057907c502a6249c8ffb7 597 SUPERFAMILY SSF53474 411 587 4.11E-13 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_0292 47bef94aa9422d23df79953beb46d825 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 15-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0292 47bef94aa9422d23df79953beb46d825 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.578 T 15-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0292 47bef94aa9422d23df79953beb46d825 179 SUPERFAMILY SSF55282 4 179 4.71E-79 T 15-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0292 47bef94aa9422d23df79953beb46d825 179 Gene3D G3DSA:3.30.1440.10 1 179 4.1E-81 T 15-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0292 47bef94aa9422d23df79953beb46d825 179 Pfam PF00281 Ribosomal protein L5 24 80 9.9E-29 T 15-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0292 47bef94aa9422d23df79953beb46d825 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 8.1E-41 T 15-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0292 47bef94aa9422d23df79953beb46d825 179 PIRSF PIRSF002161 1 179 1.3E-66 T 15-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_1171 cea3d2b70d6904d000d5891681578a43 447 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 447 46.64 T 15-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 XDD1_1171 cea3d2b70d6904d000d5891681578a43 447 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 257 1.5E-116 T 15-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 XDD1_1171 cea3d2b70d6904d000d5891681578a43 447 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 447 3.9E-186 T 15-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 XDD1_1171 cea3d2b70d6904d000d5891681578a43 447 Pfam PF11973 NQRA C-terminal domain 262 309 2.0E-19 T 15-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 XDD1_2480 273a677cef7602c2ad1c129fbb94b6d2 227 Pfam PF00072 Response regulator receiver domain 3 112 4.3E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_2480 273a677cef7602c2ad1c129fbb94b6d2 227 SMART SM00448 1 112 4.2E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_2480 273a677cef7602c2ad1c129fbb94b6d2 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 7.8E-21 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XDD1_2480 273a677cef7602c2ad1c129fbb94b6d2 227 Gene3D G3DSA:3.40.50.2300 1 121 1.4E-38 T 15-10-2018 XDD1_2480 273a677cef7602c2ad1c129fbb94b6d2 227 SMART SM00862 145 220 1.0E-18 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XDD1_2480 273a677cef7602c2ad1c129fbb94b6d2 227 Gene3D G3DSA:1.10.10.10 123 227 6.9E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2480 273a677cef7602c2ad1c129fbb94b6d2 227 SUPERFAMILY SSF52172 1 179 2.28E-38 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_2464 0ca2b1d69bd101dddb172e32ce20eec8 69 PRINTS PR00050 Cold shock protein signature 6 21 6.1E-19 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XDD1_2464 0ca2b1d69bd101dddb172e32ce20eec8 69 PRINTS PR00050 Cold shock protein signature 27 36 6.1E-19 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XDD1_2464 0ca2b1d69bd101dddb172e32ce20eec8 69 PRINTS PR00050 Cold shock protein signature 42 60 6.1E-19 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XDD1_2464 0ca2b1d69bd101dddb172e32ce20eec8 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 3.4E-33 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XDD1_2464 0ca2b1d69bd101dddb172e32ce20eec8 69 SMART SM00357 5 69 9.8E-31 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 XDD1_2464 0ca2b1d69bd101dddb172e32ce20eec8 69 PIRSF PIRSF002599 1 69 1.8E-25 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 XDD1_2464 0ca2b1d69bd101dddb172e32ce20eec8 69 SUPERFAMILY SSF50249 3 68 1.71E-26 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_2464 0ca2b1d69bd101dddb172e32ce20eec8 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 15-10-2018 IPR019844 Cold-shock conserved site XDD1_2464 0ca2b1d69bd101dddb172e32ce20eec8 69 Gene3D G3DSA:2.40.50.140 1 69 7.7E-33 T 15-10-2018 XDD1_2540 292b8d09f51bce7bb6f4546e6fdddfab 93 SUPERFAMILY SSF50715 1 92 2.62E-31 T 15-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XDD1_2540 292b8d09f51bce7bb6f4546e6fdddfab 93 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 93 28.879 T 15-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 XDD1_2540 292b8d09f51bce7bb6f4546e6fdddfab 93 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 92 1.0E-38 T 15-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 XDD1_2540 292b8d09f51bce7bb6f4546e6fdddfab 93 Pfam PF01386 Ribosomal L25p family 4 90 9.6E-26 T 15-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 XDD1_2540 292b8d09f51bce7bb6f4546e6fdddfab 93 Gene3D G3DSA:2.40.240.10 1 93 1.4E-35 T 15-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XDD1_3460 ad8d4bfd29ba9dca3f1e1ab58b417905 239 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 23 238 1.0E-61 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XDD1_0365 78120c67caa7202a4dcaf94a287e0864 869 Pfam PF12633 Adenylate cyclase NT domain 5 204 5.2E-77 T 15-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 XDD1_0365 78120c67caa7202a4dcaf94a287e0864 869 Pfam PF01295 Adenylate cyclase, class-I 232 831 6.6E-257 T 15-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 XDD1_0365 78120c67caa7202a4dcaf94a287e0864 869 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 606 620 - T 15-10-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 XDD1_0365 78120c67caa7202a4dcaf94a287e0864 869 PIRSF PIRSF001444 1 853 0.0 T 15-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 XDD1_0365 78120c67caa7202a4dcaf94a287e0864 869 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 246 257 - T 15-10-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 XDD1_3875 42295c47c184e0f41748b42cb4ea4f02 243 Pfam PF13592 Winged helix-turn helix 4 49 1.8E-15 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_3875 42295c47c184e0f41748b42cb4ea4f02 243 SUPERFAMILY SSF53098 116 216 5.01E-8 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3875 42295c47c184e0f41748b42cb4ea4f02 243 Gene3D G3DSA:3.30.420.470 30 236 3.0E-12 T 15-10-2018 XDD1_3875 42295c47c184e0f41748b42cb4ea4f02 243 Pfam PF13358 DDE superfamily endonuclease 63 207 1.2E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2923 5d285292d0d2d7d4f3c896b7873219cf 198 Gene3D G3DSA:3.40.630.30 2 175 5.0E-42 T 15-10-2018 XDD1_2923 5d285292d0d2d7d4f3c896b7873219cf 198 SUPERFAMILY SSF55729 18 169 6.01E-39 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_2923 5d285292d0d2d7d4f3c896b7873219cf 198 Pfam PF13302 Acetyltransferase (GNAT) domain 25 167 3.9E-31 T 15-10-2018 IPR000182 GNAT domain XDD1_0016 d808f941d7ffd1953c8c45290c774bd1 108 Pfam PF03713 Domain of unknown function (DUF305) 24 102 4.7E-19 T 15-10-2018 IPR005183 Domain of unknown function DUF305 XDD1_0016 d808f941d7ffd1953c8c45290c774bd1 108 Gene3D G3DSA:1.20.1260.10 13 108 2.8E-19 T 15-10-2018 IPR012347 Ferritin-like XDD1_1887 5d51ca22487dd7fdad5cd3e66fe7878c 184 Pfam PF04965 Gene 25-like lysozyme 57 158 6.5E-18 T 15-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD XDD1_1887 5d51ca22487dd7fdad5cd3e66fe7878c 184 SUPERFAMILY SSF160719 58 169 7.98E-9 T 15-10-2018 XDD1_0817 65be6a4b52bff034dd23e23301b53551 540 SUPERFAMILY SSF53850 39 537 7.1E-143 T 15-10-2018 XDD1_0817 65be6a4b52bff034dd23e23301b53551 540 Gene3D G3DSA:3.90.76.10 74 197 1.0E-182 T 15-10-2018 XDD1_0817 65be6a4b52bff034dd23e23301b53551 540 Gene3D G3DSA:3.40.190.10 45 522 1.0E-182 T 15-10-2018 XDD1_0817 65be6a4b52bff034dd23e23301b53551 540 PIRSF PIRSF002741 27 540 3.7E-114 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 XDD1_0817 65be6a4b52bff034dd23e23301b53551 540 Gene3D G3DSA:3.10.105.10 299 510 1.0E-182 T 15-10-2018 XDD1_0817 65be6a4b52bff034dd23e23301b53551 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 464 5.6E-93 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain XDD1_3667 9ee30ee46338ab6e5bcc5c43bf8c4432 210 Gene3D G3DSA:2.60.120.10 10 138 1.7E-44 T 15-10-2018 IPR014710 RmlC-like jelly roll fold XDD1_3667 9ee30ee46338ab6e5bcc5c43bf8c4432 210 Gene3D G3DSA:1.10.10.10 139 207 1.3E-35 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3667 9ee30ee46338ab6e5bcc5c43bf8c4432 210 SMART SM00419 160 208 4.5E-17 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XDD1_3667 9ee30ee46338ab6e5bcc5c43bf8c4432 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XDD1_3667 9ee30ee46338ab6e5bcc5c43bf8c4432 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XDD1_3667 9ee30ee46338ab6e5bcc5c43bf8c4432 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 15-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site XDD1_3667 9ee30ee46338ab6e5bcc5c43bf8c4432 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 15-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 XDD1_3667 9ee30ee46338ab6e5bcc5c43bf8c4432 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 15-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site XDD1_3667 9ee30ee46338ab6e5bcc5c43bf8c4432 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 1.1E-23 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain XDD1_3667 9ee30ee46338ab6e5bcc5c43bf8c4432 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.8E-15 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XDD1_3667 9ee30ee46338ab6e5bcc5c43bf8c4432 210 SUPERFAMILY SSF51206 8 136 4.06E-35 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like XDD1_3667 9ee30ee46338ab6e5bcc5c43bf8c4432 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3667 9ee30ee46338ab6e5bcc5c43bf8c4432 210 SMART SM00100 2 122 1.0E-26 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain XDD1_0090 b6d324ee54bbea7e41dd06efd6cce752 400 Pfam PF03486 HI0933-like protein 4 392 1.1E-153 T 15-10-2018 XDD1_0090 b6d324ee54bbea7e41dd06efd6cce752 400 SUPERFAMILY SSF51905 1 394 6.34E-59 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0090 b6d324ee54bbea7e41dd06efd6cce752 400 Gene3D G3DSA:1.10.8.260 262 322 1.1E-127 T 15-10-2018 IPR023166 HI0933-like insert domain superfamily XDD1_0090 b6d324ee54bbea7e41dd06efd6cce752 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 2.0E-8 T 15-10-2018 XDD1_0090 b6d324ee54bbea7e41dd06efd6cce752 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.0E-8 T 15-10-2018 XDD1_0090 b6d324ee54bbea7e41dd06efd6cce752 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 2.0E-8 T 15-10-2018 XDD1_0090 b6d324ee54bbea7e41dd06efd6cce752 400 SUPERFAMILY SSF160996 190 338 5.49E-43 T 15-10-2018 XDD1_0090 b6d324ee54bbea7e41dd06efd6cce752 400 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 392 3.9E-129 T 15-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like XDD1_0090 b6d324ee54bbea7e41dd06efd6cce752 400 Gene3D G3DSA:3.50.50.60 7 388 1.1E-127 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0090 b6d324ee54bbea7e41dd06efd6cce752 400 Gene3D G3DSA:2.40.30.10 188 339 1.1E-127 T 15-10-2018 XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 1312 1388 0.74 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 255 332 1.9E-5 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 794 850 0.014 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 685 763 0.76 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 2007 2053 0.22 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 970 1028 0.012 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 1402 1478 1.4 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 2166 2217 9.5E-5 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 382 437 0.1 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 1852 1893 220.0 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 602 672 3.7E-4 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 864 941 0.0011 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 1552 1607 0.0019 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 2090 2160 0.013 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 1220 1297 1.6E-4 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 3091 3127 6.7 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 1916 1982 0.0045 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 2681 2734 43.0 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 1753 1790 3.4 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 484 585 0.01 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 2522 2564 8.4 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 1037 1119 1.1E-4 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 1150 1206 0.005 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05594 Haemagluttinin repeat 2251 2347 0.084 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 23 8.1E-10 T 15-10-2018 IPR024973 ESPR domain XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF05860 haemagglutination activity domain 75 206 2.0E-31 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 SUPERFAMILY SSF51126 77 360 1.32E-62 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 SMART SM00912 88 208 1.3E-44 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Gene3D G3DSA:2.160.20.10 75 369 1.0E-100 T 15-10-2018 IPR012334 Pectin lyase fold XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF13332 Haemagluttinin repeat 3209 3317 3.9E-6 T 15-10-2018 IPR025157 Hemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF13332 Haemagluttinin repeat 3348 3497 1.7E-12 T 15-10-2018 IPR025157 Hemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF13332 Haemagluttinin repeat 3585 3759 6.1E-45 T 15-10-2018 IPR025157 Hemagglutinin repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2681 2717 0.056 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2285 2325 9.1E-4 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 691 712 0.96 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1699 1737 9.2E-5 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1956 1989 1.1E-5 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2249 2284 0.011 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2183 2224 1.3E-5 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 961 999 0.0043 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1931 1971 3.3E-5 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 605 637 1.5 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1553 1585 0.9 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1567 1607 0.05 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1388 1428 0.096 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1744 1780 7.8E-4 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2432 2469 0.22 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2059 2098 9.5E-6 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2350 2383 0.071 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2265 2298 0.0038 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 484 518 0.11 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2145 2182 9.8E-5 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 598 625 0.95 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2099 2138 1.5E-4 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1916 1950 4.3E-4 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1499 1537 0.0029 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2337 2370 0.017 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1725 1744 0.1 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1226 1261 0.65 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 870 905 0.73 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2013 2053 9.8E-7 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2225 2263 0.0056 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1972 2011 0.0026 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 783 822 0.046 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2220 2243 0.027 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1850 1883 0.0018 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1443 1477 0.41 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1139 1177 0.48 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 107 202 5.9E-22 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal XDD1_1119 65da3e481a244e11a73f6ce64cdb5c57 4436 Pfam PF04829 Pre-toxin domain with VENN motif 4124 4173 1.0E-17 T 15-10-2018 IPR006914 VENN motif-containing domain XDD1_3118 6d0b24cb45cfacaa55a0a8ba29641cca 247 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 184 9.6E-19 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 XDD1_3118 6d0b24cb45cfacaa55a0a8ba29641cca 247 SUPERFAMILY SSF51735 1 233 2.44E-31 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_3118 6d0b24cb45cfacaa55a0a8ba29641cca 247 Gene3D G3DSA:3.40.50.720 2 234 9.2E-42 T 15-10-2018 XDD1_0724 ee68b62af1e4ca9d8c5cd7a77dde20d2 103 Gene3D G3DSA:1.10.260.40 2 74 7.8E-16 T 15-10-2018 XDD1_0724 ee68b62af1e4ca9d8c5cd7a77dde20d2 103 SUPERFAMILY SSF47413 4 63 4.22E-14 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_0724 ee68b62af1e4ca9d8c5cd7a77dde20d2 103 SMART SM00530 11 66 1.4E-11 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_0724 ee68b62af1e4ca9d8c5cd7a77dde20d2 103 Pfam PF01381 Helix-turn-helix 12 63 1.3E-13 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_3240 443a0e9af56d0d5e0ff2e669f972fbf1 405 Gene3D G3DSA:1.20.1270.210 39 315 2.0E-5 T 15-10-2018 XDD1_3240 443a0e9af56d0d5e0ff2e669f972fbf1 405 Pfam PF04860 Phage portal protein 43 377 1.9E-90 T 15-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein XDD1_3240 443a0e9af56d0d5e0ff2e669f972fbf1 405 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 35 383 2.6E-76 T 15-10-2018 IPR006427 Phage portal protein, HK97 XDD1_3240 443a0e9af56d0d5e0ff2e669f972fbf1 405 Gene3D G3DSA:3.30.1120.70 210 258 2.0E-5 T 15-10-2018 XDD1_3240 443a0e9af56d0d5e0ff2e669f972fbf1 405 Gene3D G3DSA:2.40.500.30 60 320 2.0E-5 T 15-10-2018 XDD1_3372 688695d7f8f2ae588aff9e6b99d6781c 296 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 XDD1_3372 688695d7f8f2ae588aff9e6b99d6781c 296 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 288 5.0E-102 T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 XDD1_3372 688695d7f8f2ae588aff9e6b99d6781c 296 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 278 1.8E-81 T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 XDD1_3372 688695d7f8f2ae588aff9e6b99d6781c 296 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 283 20.466 T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 XDD1_3643 299a28ae3c0b201bade0471c36330569 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 15-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_3643 299a28ae3c0b201bade0471c36330569 165 Pfam PF00466 Ribosomal protein L10 5 101 1.7E-27 T 15-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 XDD1_3643 299a28ae3c0b201bade0471c36330569 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 27.31 T 15-10-2018 IPR022973 Ribosomal protein L10 XDD1_3643 299a28ae3c0b201bade0471c36330569 165 Gene3D G3DSA:3.30.70.1730 1 125 5.2E-37 T 15-10-2018 XDD1_3643 299a28ae3c0b201bade0471c36330569 165 SUPERFAMILY SSF160369 4 162 1.83E-50 T 15-10-2018 XDD1_0298 e1ebb41060a0c664e3d0b80faacf63e7 61 ProSitePatterns PS00634 Ribosomal protein L30 signature. 25 57 - T 15-10-2018 IPR018038 Ribosomal protein L30, conserved site XDD1_0298 e1ebb41060a0c664e3d0b80faacf63e7 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 7 61 7.5E-28 T 15-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0298 e1ebb41060a0c664e3d0b80faacf63e7 61 SUPERFAMILY SSF55129 5 61 6.15E-22 T 15-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily XDD1_0298 e1ebb41060a0c664e3d0b80faacf63e7 61 PIRSF PIRSF002211 3 61 8.8E-30 T 15-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0298 e1ebb41060a0c664e3d0b80faacf63e7 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 4 61 22.629 T 15-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0298 e1ebb41060a0c664e3d0b80faacf63e7 61 Pfam PF00327 Ribosomal protein L30p/L7e 7 57 1.8E-20 T 15-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain XDD1_0298 e1ebb41060a0c664e3d0b80faacf63e7 61 Gene3D G3DSA:3.30.1390.20 3 61 6.8E-28 T 15-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily XDD1_0925 2513eea239dbf5e01c459c14d3761a36 291 SUPERFAMILY SSF52833 10 118 1.03E-22 T 15-10-2018 IPR036249 Thioredoxin-like superfamily XDD1_0925 2513eea239dbf5e01c459c14d3761a36 291 Pfam PF14559 Tetratricopeptide repeat 131 197 5.2E-16 T 15-10-2018 XDD1_0925 2513eea239dbf5e01c459c14d3761a36 291 SUPERFAMILY SSF48452 130 253 2.71E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_0925 2513eea239dbf5e01c459c14d3761a36 291 Gene3D G3DSA:1.25.40.10 119 203 4.4E-18 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_0925 2513eea239dbf5e01c459c14d3761a36 291 Pfam PF14561 Tetratricopeptide repeat 203 291 6.5E-28 T 15-10-2018 XDD1_0925 2513eea239dbf5e01c459c14d3761a36 291 Pfam PF00085 Thioredoxin 16 112 4.4E-15 T 15-10-2018 IPR013766 Thioredoxin domain GO:0045454 XDD1_0925 2513eea239dbf5e01c459c14d3761a36 291 Gene3D G3DSA:1.25.40.10 204 291 1.6E-23 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_0925 2513eea239dbf5e01c459c14d3761a36 291 Gene3D G3DSA:3.40.30.10 6 118 1.2E-22 T 15-10-2018 XDD1_3652 baf7304dd115fe2c96007ebf1a215777 95 Pfam PF04077 DsrH like protein 7 91 3.4E-28 T 15-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 XDD1_3652 baf7304dd115fe2c96007ebf1a215777 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 3.5E-30 T 15-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 XDD1_3652 baf7304dd115fe2c96007ebf1a215777 95 Gene3D G3DSA:3.40.1260.10 1 95 9.9E-30 T 15-10-2018 IPR027396 DsrEFH-like XDD1_3652 baf7304dd115fe2c96007ebf1a215777 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 26.165 T 15-10-2018 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 XDD1_3652 baf7304dd115fe2c96007ebf1a215777 95 SUPERFAMILY SSF75169 1 95 1.39E-28 T 15-10-2018 IPR027396 DsrEFH-like XDD1_2561 5075f2eb64db394fbd03a57bc9c36553 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 2.4E-17 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_2561 5075f2eb64db394fbd03a57bc9c36553 216 SMART SM00421 148 205 2.1E-14 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_2561 5075f2eb64db394fbd03a57bc9c36553 216 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.896 T 15-10-2018 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 XDD1_2561 5075f2eb64db394fbd03a57bc9c36553 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_2561 5075f2eb64db394fbd03a57bc9c36553 216 SUPERFAMILY SSF46894 147 206 6.12E-16 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XDD1_2561 5075f2eb64db394fbd03a57bc9c36553 216 Gene3D G3DSA:3.40.50.2300 1 144 4.2E-29 T 15-10-2018 XDD1_2561 5075f2eb64db394fbd03a57bc9c36553 216 Pfam PF00072 Response regulator receiver domain 6 120 2.4E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_2561 5075f2eb64db394fbd03a57bc9c36553 216 SMART SM00448 4 120 4.1E-14 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_2561 5075f2eb64db394fbd03a57bc9c36553 216 Gene3D G3DSA:1.10.10.10 145 208 3.8E-13 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2561 5075f2eb64db394fbd03a57bc9c36553 216 SUPERFAMILY SSF52172 3 135 7.68E-22 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_2561 5075f2eb64db394fbd03a57bc9c36553 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 6.9E-8 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_2561 5075f2eb64db394fbd03a57bc9c36553 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 6.9E-8 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_2561 5075f2eb64db394fbd03a57bc9c36553 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 6.9E-8 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_2542 94d8c50b03dbdfe3ca8a8145c4cd576c 75 PIRSF PIRSF006188 1 72 3.9E-32 T 15-10-2018 IPR009857 Uncharacterised protein family UPF0352 XDD1_2542 94d8c50b03dbdfe3ca8a8145c4cd576c 75 Gene3D G3DSA:1.10.3390.10 1 75 3.6E-33 T 15-10-2018 IPR023202 YejL-like superfamily XDD1_2542 94d8c50b03dbdfe3ca8a8145c4cd576c 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 1.0E-28 T 15-10-2018 IPR009857 Uncharacterised protein family UPF0352 XDD1_2542 94d8c50b03dbdfe3ca8a8145c4cd576c 75 Pfam PF07208 Protein of unknown function (DUF1414) 27 69 5.3E-22 T 15-10-2018 IPR009857 Uncharacterised protein family UPF0352 XDD1_2542 94d8c50b03dbdfe3ca8a8145c4cd576c 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 21.751 T 15-10-2018 IPR009857 Uncharacterised protein family UPF0352 XDD1_2542 94d8c50b03dbdfe3ca8a8145c4cd576c 75 SUPERFAMILY SSF158651 1 75 6.93E-30 T 15-10-2018 IPR023202 YejL-like superfamily XDD1_3178 f98a740d5c8cf7e8f935ce9fb8853046 277 SUPERFAMILY SSF56219 57 275 4.84E-24 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XDD1_3178 f98a740d5c8cf7e8f935ce9fb8853046 277 Gene3D G3DSA:3.60.10.10 57 277 4.7E-18 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XDD1_3178 f98a740d5c8cf7e8f935ce9fb8853046 277 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 65 268 1.3E-8 T 15-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase XDD1_1354 cafdc7497b104430df7572aa94a91dbf 435 Pfam PF04052 TolB amino-terminal domain 27 126 6.0E-33 T 15-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 XDD1_1354 cafdc7497b104430df7572aa94a91dbf 435 SUPERFAMILY SSF52964 32 165 7.32E-41 T 15-10-2018 XDD1_1354 cafdc7497b104430df7572aa94a91dbf 435 Gene3D G3DSA:3.40.50.10070 26 168 3.2E-52 T 15-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 XDD1_1354 cafdc7497b104430df7572aa94a91dbf 435 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 8 431 50.192 T 15-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 XDD1_1354 cafdc7497b104430df7572aa94a91dbf 435 Pfam PF07676 WD40-like Beta Propeller Repeat 286 320 1.7E-10 T 15-10-2018 IPR011659 WD40-like Beta Propeller XDD1_1354 cafdc7497b104430df7572aa94a91dbf 435 Pfam PF07676 WD40-like Beta Propeller Repeat 375 401 0.013 T 15-10-2018 IPR011659 WD40-like Beta Propeller XDD1_1354 cafdc7497b104430df7572aa94a91dbf 435 Pfam PF07676 WD40-like Beta Propeller Repeat 203 228 0.022 T 15-10-2018 IPR011659 WD40-like Beta Propeller XDD1_1354 cafdc7497b104430df7572aa94a91dbf 435 Pfam PF07676 WD40-like Beta Propeller Repeat 242 277 1.8E-9 T 15-10-2018 IPR011659 WD40-like Beta Propeller XDD1_1354 cafdc7497b104430df7572aa94a91dbf 435 SUPERFAMILY SSF69304 159 433 1.83E-55 T 15-10-2018 XDD1_1354 cafdc7497b104430df7572aa94a91dbf 435 Gene3D G3DSA:2.120.10.30 169 435 8.7E-113 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XDD1_1354 cafdc7497b104430df7572aa94a91dbf 435 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 18 432 2.1E-161 T 15-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 XDD1_2324 ea970955ba1110cacaec13b50706cc0e 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 2.2E-67 T 15-10-2018 XDD1_2324 ea970955ba1110cacaec13b50706cc0e 252 Gene3D G3DSA:3.40.50.720 1 249 6.1E-84 T 15-10-2018 XDD1_2324 ea970955ba1110cacaec13b50706cc0e 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XDD1_2324 ea970955ba1110cacaec13b50706cc0e 252 SUPERFAMILY SSF51735 5 244 1.69E-83 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2324 ea970955ba1110cacaec13b50706cc0e 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.1E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2324 ea970955ba1110cacaec13b50706cc0e 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.1E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2324 ea970955ba1110cacaec13b50706cc0e 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.1E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2324 ea970955ba1110cacaec13b50706cc0e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 4.7E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2324 ea970955ba1110cacaec13b50706cc0e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 4.7E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2324 ea970955ba1110cacaec13b50706cc0e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 4.7E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2324 ea970955ba1110cacaec13b50706cc0e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.7E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2324 ea970955ba1110cacaec13b50706cc0e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.7E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2324 ea970955ba1110cacaec13b50706cc0e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 4.7E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3655 6287a0b498cf6bb2f0480bd1191f7ff9 240 Pfam PF08348 YheO-like PAS domain 29 137 5.5E-36 T 15-10-2018 IPR013559 YheO-like XDD1_3655 6287a0b498cf6bb2f0480bd1191f7ff9 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 26 141 8.0E-61 T 15-10-2018 IPR013559 YheO-like XDD1_3655 6287a0b498cf6bb2f0480bd1191f7ff9 240 Pfam PF13309 HTH domain 171 228 5.6E-19 T 15-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain XDD1_1186 ad0ad3b62eee3fc7fac0019f3f8330d1 415 Gene3D G3DSA:1.20.1250.20 2 194 3.0E-16 T 15-10-2018 XDD1_1186 ad0ad3b62eee3fc7fac0019f3f8330d1 415 SUPERFAMILY SSF103473 4 387 2.75E-37 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1186 ad0ad3b62eee3fc7fac0019f3f8330d1 415 Gene3D G3DSA:1.20.1250.20 199 387 3.1E-11 T 15-10-2018 XDD1_1186 ad0ad3b62eee3fc7fac0019f3f8330d1 415 Pfam PF07690 Major Facilitator Superfamily 20 268 4.4E-20 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_3931 e489d903333e337258fdb08a860d6fe4 84 Pfam PF13358 DDE superfamily endonuclease 8 48 2.9E-13 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_3931 e489d903333e337258fdb08a860d6fe4 84 Gene3D G3DSA:3.30.420.470 1 78 2.3E-8 T 15-10-2018 XDD1_3825 e489d903333e337258fdb08a860d6fe4 84 Pfam PF13358 DDE superfamily endonuclease 8 48 2.9E-13 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_3825 e489d903333e337258fdb08a860d6fe4 84 Gene3D G3DSA:3.30.420.470 1 78 2.3E-8 T 15-10-2018 XDD1_0408 3126b80f0f6c81dfb90ddf3029be490e 157 SUPERFAMILY SSF46689 35 132 2.6E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0408 3126b80f0f6c81dfb90ddf3029be490e 157 Pfam PF13551 Winged helix-turn helix 32 90 6.4E-11 T 15-10-2018 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 SMART SM00279 203 238 9.8E-14 T 15-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 SUPERFAMILY SSF47807 201 321 1.26E-31 T 15-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 39 200 7.4E-56 T 15-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 201 302 2.8E-28 T 15-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 SUPERFAMILY SSF53098 359 553 1.57E-54 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 Gene3D G3DSA:1.10.150.20 745 888 1.6E-116 T 15-10-2018 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 Gene3D G3DSA:3.30.420.10 359 578 5.0E-71 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 Gene3D G3DSA:3.30.70.370 700 960 1.6E-116 T 15-10-2018 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 TIGRFAM TIGR00593 pola: DNA polymerase I 39 964 8.4E-293 T 15-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 Gene3D G3DSA:1.10.150.20 204 283 1.0E-95 T 15-10-2018 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 SUPERFAMILY SSF88723 37 200 1.1E-58 T 15-10-2018 IPR029060 PIN-like domain superfamily XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 SMART SM00474 362 553 2.0E-44 T 15-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 SUPERFAMILY SSF56672 558 964 7.67E-162 T 15-10-2018 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 Gene3D G3DSA:1.20.1060.10 579 694 3.7E-42 T 15-10-2018 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 ProSitePatterns PS00447 DNA polymerase family A signature. 790 809 - T 15-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 Pfam PF01612 3'-5' exonuclease 362 553 7.1E-42 T 15-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 SMART SM00475 37 298 4.8E-137 T 15-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 PRINTS PR00868 DNA-polymerase family A (pol I) signature 691 713 1.2E-78 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 PRINTS PR00868 DNA-polymerase family A (pol I) signature 881 897 1.2E-78 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 PRINTS PR00868 DNA-polymerase family A (pol I) signature 790 815 1.2E-78 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 PRINTS PR00868 DNA-polymerase family A (pol I) signature 736 759 1.2E-78 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 PRINTS PR00868 DNA-polymerase family A (pol I) signature 827 838 1.2E-78 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 PRINTS PR00868 DNA-polymerase family A (pol I) signature 849 860 1.2E-78 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 PRINTS PR00868 DNA-polymerase family A (pol I) signature 911 924 1.2E-78 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 PRINTS PR00868 DNA-polymerase family A (pol I) signature 766 779 1.2E-78 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 PRINTS PR00868 DNA-polymerase family A (pol I) signature 714 729 1.2E-78 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 Gene3D G3DSA:3.40.50.1010 39 314 1.0E-95 T 15-10-2018 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 Pfam PF00476 DNA polymerase family A 587 961 8.9E-160 T 15-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_3672 28c89b17a52af4567448dbf3fcbce126 964 SMART SM00482 722 928 1.8E-126 T 15-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_0037 4ed5ada97c016a2b1a1b6a286508be97 177 SUPERFAMILY SSF47928 3 104 8.24E-29 T 15-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0037 4ed5ada97c016a2b1a1b6a286508be97 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 19.106 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0037 4ed5ada97c016a2b1a1b6a286508be97 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 15-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0037 4ed5ada97c016a2b1a1b6a286508be97 177 Gene3D G3DSA:1.10.520.20 2 106 1.8E-38 T 15-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0037 4ed5ada97c016a2b1a1b6a286508be97 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 9.5E-52 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0037 4ed5ada97c016a2b1a1b6a286508be97 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 2.3E-64 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0037 4ed5ada97c016a2b1a1b6a286508be97 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 5.7E-29 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0037 4ed5ada97c016a2b1a1b6a286508be97 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 5.7E-29 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0037 4ed5ada97c016a2b1a1b6a286508be97 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 5.7E-29 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0037 4ed5ada97c016a2b1a1b6a286508be97 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 5.7E-29 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0037 4ed5ada97c016a2b1a1b6a286508be97 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 5.7E-29 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_2160 54f0afcdb35fd59deed69bdc5e8a1f14 211 Pfam PF04229 GrpB protein 35 193 2.0E-48 T 15-10-2018 IPR007344 GrpB/Dephospho-CoA kinase XDD1_2160 54f0afcdb35fd59deed69bdc5e8a1f14 211 Gene3D G3DSA:3.30.460.10 33 198 2.6E-45 T 15-10-2018 XDD1_2160 54f0afcdb35fd59deed69bdc5e8a1f14 211 SUPERFAMILY SSF81301 37 196 3.27E-44 T 15-10-2018 XDD1_2133 17a093a2a49b2e971a7e819e800948ed 268 SUPERFAMILY SSF51197 5 255 2.84E-36 T 15-10-2018 XDD1_2133 17a093a2a49b2e971a7e819e800948ed 268 Gene3D G3DSA:3.60.130.10 1 264 3.0E-38 T 15-10-2018 XDD1_2133 17a093a2a49b2e971a7e819e800948ed 268 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 5 260 1.9E-30 T 15-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 XDD1_2146 eaf8cc104495402740f5aba1c0cc2d28 468 Pfam PF07690 Major Facilitator Superfamily 13 417 3.1E-40 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_2146 eaf8cc104495402740f5aba1c0cc2d28 468 SUPERFAMILY SSF103473 200 466 1.96E-26 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_2146 eaf8cc104495402740f5aba1c0cc2d28 468 Gene3D G3DSA:1.20.1720.10 8 199 3.2E-38 T 15-10-2018 XDD1_2146 eaf8cc104495402740f5aba1c0cc2d28 468 Gene3D G3DSA:1.20.1250.20 200 461 4.0E-19 T 15-10-2018 XDD1_2146 eaf8cc104495402740f5aba1c0cc2d28 468 SUPERFAMILY SSF103473 2 191 1.44E-36 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_2248 076c1e2ccd98ada2d1906fea275a898e 352 Hamap MF_00625 Selenide, water dikinase [selD]. 4 351 45.459 T 15-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 XDD1_2248 076c1e2ccd98ada2d1906fea275a898e 352 Gene3D G3DSA:3.30.1330.10 1 166 2.6E-47 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XDD1_2248 076c1e2ccd98ada2d1906fea275a898e 352 Gene3D G3DSA:3.90.650.10 168 351 1.4E-50 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XDD1_2248 076c1e2ccd98ada2d1906fea275a898e 352 Pfam PF00586 AIR synthase related protein, N-terminal domain 54 161 1.2E-18 T 15-10-2018 IPR016188 PurM-like, N-terminal domain XDD1_2248 076c1e2ccd98ada2d1906fea275a898e 352 SUPERFAMILY SSF56042 168 341 1.64E-49 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XDD1_2248 076c1e2ccd98ada2d1906fea275a898e 352 Pfam PF02769 AIR synthase related protein, C-terminal domain 173 342 2.6E-26 T 15-10-2018 IPR010918 PurM-like, C-terminal domain XDD1_2248 076c1e2ccd98ada2d1906fea275a898e 352 PIRSF PIRSF036407 1 350 6.8E-116 T 15-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 XDD1_2248 076c1e2ccd98ada2d1906fea275a898e 352 TIGRFAM TIGR00476 selD: selenide, water dikinase 6 316 6.1E-135 T 15-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 XDD1_2248 076c1e2ccd98ada2d1906fea275a898e 352 SUPERFAMILY SSF55326 6 162 1.2E-39 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XDD1_2740 2b7569b3c1e8fe129a8e1a862657a687 405 Pfam PF00589 Phage integrase family 211 372 5.4E-13 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XDD1_2740 2b7569b3c1e8fe129a8e1a862657a687 405 Gene3D G3DSA:1.10.150.130 106 210 1.7E-9 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal XDD1_2740 2b7569b3c1e8fe129a8e1a862657a687 405 Pfam PF13356 Arm DNA-binding domain 8 91 1.6E-13 T 15-10-2018 IPR025166 Integrase, DNA-binding domain XDD1_2740 2b7569b3c1e8fe129a8e1a862657a687 405 SUPERFAMILY SSF56349 104 376 5.89E-38 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XDD1_2740 2b7569b3c1e8fe129a8e1a862657a687 405 Gene3D G3DSA:1.10.443.10 211 385 1.2E-16 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XDD1_2740 2b7569b3c1e8fe129a8e1a862657a687 405 Gene3D G3DSA:3.30.160.390 6 105 1.4E-20 T 15-10-2018 IPR038488 Integrase, DNA-binding domain superfamily XDD1_1843 ccf431ed2f7cc51dea0bccd2956b0dc0 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 484 787 1.6E-58 T 15-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 XDD1_1843 ccf431ed2f7cc51dea0bccd2956b0dc0 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 353 9.7E-120 T 15-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 XDD1_1843 ccf431ed2f7cc51dea0bccd2956b0dc0 792 Gene3D G3DSA:3.30.1490.20 7 198 1.1E-70 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XDD1_1843 ccf431ed2f7cc51dea0bccd2956b0dc0 792 Gene3D G3DSA:3.50.30.10 375 480 3.6E-41 T 15-10-2018 XDD1_1843 ccf431ed2f7cc51dea0bccd2956b0dc0 792 SUPERFAMILY SSF56059 9 387 1.29E-107 T 15-10-2018 XDD1_1843 ccf431ed2f7cc51dea0bccd2956b0dc0 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 387 458 2.4E-27 T 15-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 XDD1_1843 ccf431ed2f7cc51dea0bccd2956b0dc0 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 417 428 - T 15-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 XDD1_1843 ccf431ed2f7cc51dea0bccd2956b0dc0 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 789 0.0 T 15-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 XDD1_1843 ccf431ed2f7cc51dea0bccd2956b0dc0 792 Gene3D G3DSA:3.20.20.60 481 790 2.5E-97 T 15-10-2018 XDD1_1843 ccf431ed2f7cc51dea0bccd2956b0dc0 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 697 715 - T 15-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 XDD1_1843 ccf431ed2f7cc51dea0bccd2956b0dc0 792 Gene3D G3DSA:3.30.470.20 199 360 4.6E-60 T 15-10-2018 XDD1_1843 ccf431ed2f7cc51dea0bccd2956b0dc0 792 PIRSF PIRSF000854 6 792 0.0 T 15-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 XDD1_1843 ccf431ed2f7cc51dea0bccd2956b0dc0 792 SUPERFAMILY SSF52009 351 470 3.53E-36 T 15-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 XDD1_1843 ccf431ed2f7cc51dea0bccd2956b0dc0 792 SUPERFAMILY SSF51621 468 789 1.96E-93 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XDD1_0779 22f2998fe57a1a3520ac8b4eb25c1a1c 310 SUPERFAMILY SSF55060 174 290 3.96E-31 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily XDD1_0779 22f2998fe57a1a3520ac8b4eb25c1a1c 310 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 91 102 - T 15-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 XDD1_0779 22f2998fe57a1a3520ac8b4eb25c1a1c 310 PIRSF PIRSF000676 1 310 7.2E-80 T 15-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 XDD1_0779 22f2998fe57a1a3520ac8b4eb25c1a1c 310 Hamap MF_00384 Homoserine kinase [thrB]. 5 309 28.429 T 15-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 XDD1_0779 22f2998fe57a1a3520ac8b4eb25c1a1c 310 TIGRFAM TIGR00191 thrB: homoserine kinase 3 309 2.1E-107 T 15-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 XDD1_0779 22f2998fe57a1a3520ac8b4eb25c1a1c 310 SUPERFAMILY SSF54211 1 163 9.87E-33 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_0779 22f2998fe57a1a3520ac8b4eb25c1a1c 310 PRINTS PR00958 Homoserine kinase signature 176 193 1.1E-31 T 15-10-2018 XDD1_0779 22f2998fe57a1a3520ac8b4eb25c1a1c 310 PRINTS PR00958 Homoserine kinase signature 10 25 1.1E-31 T 15-10-2018 XDD1_0779 22f2998fe57a1a3520ac8b4eb25c1a1c 310 PRINTS PR00958 Homoserine kinase signature 98 113 1.1E-31 T 15-10-2018 XDD1_0779 22f2998fe57a1a3520ac8b4eb25c1a1c 310 PRINTS PR00958 Homoserine kinase signature 255 270 1.1E-31 T 15-10-2018 XDD1_0779 22f2998fe57a1a3520ac8b4eb25c1a1c 310 PRINTS PR00958 Homoserine kinase signature 138 151 1.1E-31 T 15-10-2018 XDD1_0779 22f2998fe57a1a3520ac8b4eb25c1a1c 310 Pfam PF00288 GHMP kinases N terminal domain 85 151 4.0E-13 T 15-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 XDD1_0779 22f2998fe57a1a3520ac8b4eb25c1a1c 310 Pfam PF08544 GHMP kinases C terminal 213 288 1.7E-8 T 15-10-2018 IPR013750 GHMP kinase, C-terminal domain XDD1_0779 22f2998fe57a1a3520ac8b4eb25c1a1c 310 Gene3D G3DSA:3.30.70.890 169 278 4.3E-95 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily XDD1_0779 22f2998fe57a1a3520ac8b4eb25c1a1c 310 Gene3D G3DSA:3.30.230.10 5 168 4.3E-95 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XDD1_3426 77f7c6072b266a4a06febed08e6c6732 218 Pfam PF09684 Phage tail protein (Tail_P2_I) 38 157 2.8E-4 T 15-10-2018 IPR006521 Tail protein I XDD1_2838 77f7c6072b266a4a06febed08e6c6732 218 Pfam PF09684 Phage tail protein (Tail_P2_I) 38 157 2.8E-4 T 15-10-2018 IPR006521 Tail protein I XDD1_3593 66220cfb1df1de25fd153da57b167e64 117 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 3 117 2.0E-41 T 15-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 XDD1_3593 66220cfb1df1de25fd153da57b167e64 117 SUPERFAMILY SSF81343 1 117 5.62E-49 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_3593 66220cfb1df1de25fd153da57b167e64 117 PIRSF PIRSF000179 1 117 2.2E-49 T 15-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 XDD1_3593 66220cfb1df1de25fd153da57b167e64 117 Pfam PF02313 Fumarate reductase subunit D 5 114 1.4E-48 T 15-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 XDD1_3593 66220cfb1df1de25fd153da57b167e64 117 Gene3D G3DSA:1.20.1300.10 1 117 4.9E-49 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_3593 66220cfb1df1de25fd153da57b167e64 117 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 1 117 26.049 T 15-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 XDD1_2675 b6e8e5564c29041b9782099a1861713f 473 Pfam PF00324 Amino acid permease 27 454 6.0E-94 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 XDD1_2675 b6e8e5564c29041b9782099a1861713f 473 Gene3D G3DSA:1.20.1740.10 18 472 2.4E-56 T 15-10-2018 XDD1_2675 b6e8e5564c29041b9782099a1861713f 473 PIRSF PIRSF006060 5 472 1.4E-61 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XDD1_2173 0ad08a979353a01486e677aba2ea7406 222 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 202 21.913 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 XDD1_2173 0ad08a979353a01486e677aba2ea7406 222 Pfam PF13500 AAA domain 4 200 7.0E-25 T 15-10-2018 XDD1_2173 0ad08a979353a01486e677aba2ea7406 222 SUPERFAMILY SSF52540 1 204 1.27E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2173 0ad08a979353a01486e677aba2ea7406 222 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 169 9.1E-38 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 XDD1_2173 0ad08a979353a01486e677aba2ea7406 222 Gene3D G3DSA:3.40.50.300 3 217 2.7E-48 T 15-10-2018 XDD1_2173 0ad08a979353a01486e677aba2ea7406 222 PIRSF PIRSF006755 1 220 2.0E-60 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 XDD1_2809 ab6a359b2162c2dcd23e90837d58c460 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 79 97 8.1E-6 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_2809 ab6a359b2162c2dcd23e90837d58c460 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 8.1E-6 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_2809 ab6a359b2162c2dcd23e90837d58c460 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 170 2.0E-38 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XDD1_2809 ab6a359b2162c2dcd23e90837d58c460 301 SUPERFAMILY SSF54814 182 297 6.54E-43 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 XDD1_2809 ab6a359b2162c2dcd23e90837d58c460 301 Gene3D G3DSA:3.30.300.20 186 301 2.7E-43 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta XDD1_2809 ab6a359b2162c2dcd23e90837d58c460 301 Pfam PF01926 50S ribosome-binding GTPase 11 125 1.1E-23 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_2809 ab6a359b2162c2dcd23e90837d58c460 301 Hamap MF_00367 GTPase Era [era]. 6 297 35.651 T 15-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_2809 ab6a359b2162c2dcd23e90837d58c460 301 Gene3D G3DSA:3.40.50.300 2 184 5.9E-50 T 15-10-2018 XDD1_2809 ab6a359b2162c2dcd23e90837d58c460 301 Pfam PF07650 KH domain 209 285 4.4E-20 T 15-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_2809 ab6a359b2162c2dcd23e90837d58c460 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 280 2.3E-116 T 15-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_2809 ab6a359b2162c2dcd23e90837d58c460 301 SUPERFAMILY SSF52540 11 205 1.17E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1742 dc15163585e6b41f86f8cde456d609e1 168 SUPERFAMILY SSF47240 1 159 1.24E-58 T 15-10-2018 IPR009078 Ferritin-like superfamily XDD1_1742 dc15163585e6b41f86f8cde456d609e1 168 Gene3D G3DSA:1.20.1260.10 1 165 4.2E-51 T 15-10-2018 IPR012347 Ferritin-like XDD1_1742 dc15163585e6b41f86f8cde456d609e1 168 Pfam PF00210 Ferritin-like domain 7 143 1.1E-41 T 15-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 XDD1_1888 5eb941480f0c097f37203997e200bdc5 495 SUPERFAMILY SSF49879 15 103 2.87E-11 T 15-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 XDD1_1888 5eb941480f0c097f37203997e200bdc5 495 Gene3D G3DSA:2.60.200.20 3 105 3.6E-8 T 15-10-2018 XDD1_1888 5eb941480f0c097f37203997e200bdc5 495 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 5 480 6.8E-48 T 15-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein XDD1_1888 5eb941480f0c097f37203997e200bdc5 495 Pfam PF00498 FHA domain 27 95 3.7E-5 T 15-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 XDD1_2782 b642c5436cca118b155f394e6670f829 111 SUPERFAMILY SSF54292 4 109 1.22E-34 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 XDD1_2782 b642c5436cca118b155f394e6670f829 111 Gene3D G3DSA:3.10.20.30 1 111 6.6E-37 T 15-10-2018 IPR012675 Beta-grasp domain superfamily XDD1_2782 b642c5436cca118b155f394e6670f829 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 15-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 XDD1_2782 b642c5436cca118b155f394e6670f829 111 PRINTS PR00355 Adrenodoxin signature 42 52 3.1E-10 T 15-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 XDD1_2782 b642c5436cca118b155f394e6670f829 111 PRINTS PR00355 Adrenodoxin signature 60 74 3.1E-10 T 15-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 XDD1_2782 b642c5436cca118b155f394e6670f829 111 PRINTS PR00355 Adrenodoxin signature 83 91 3.1E-10 T 15-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 XDD1_2782 b642c5436cca118b155f394e6670f829 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 1.2E-63 T 15-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 XDD1_2782 b642c5436cca118b155f394e6670f829 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 91 3.8E-15 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 XDD1_0293 4a722341cdf2269fb0900e019a77f1f9 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 15-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0293 4a722341cdf2269fb0900e019a77f1f9 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.722 T 15-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid XDD1_0293 4a722341cdf2269fb0900e019a77f1f9 101 Gene3D G3DSA:4.10.830.10 41 101 1.7E-22 T 15-10-2018 XDD1_0293 4a722341cdf2269fb0900e019a77f1f9 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 5.7E-26 T 15-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0293 4a722341cdf2269fb0900e019a77f1f9 101 SUPERFAMILY SSF57716 2 101 7.06E-38 T 15-10-2018 XDD1_1353 f17c8877ff5690997cb61a5cce2b9e93 347 Gene3D G3DSA:3.30.1150.10 255 346 3.1E-29 T 15-10-2018 XDD1_1353 f17c8877ff5690997cb61a5cce2b9e93 347 Pfam PF06519 TolA C-terminal 249 342 4.1E-29 T 15-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 XDD1_1353 f17c8877ff5690997cb61a5cce2b9e93 347 TIGRFAM TIGR02794 tolA_full: protein TolA 13 344 1.9E-84 T 15-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 XDD1_1353 f17c8877ff5690997cb61a5cce2b9e93 347 SUPERFAMILY SSF74653 256 345 6.28E-21 T 15-10-2018 XDD1_3071 c6403acdf1dc7bac33421b1c2833907a 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 2.5E-144 T 15-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XDD1_3071 c6403acdf1dc7bac33421b1c2833907a 264 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 1.1E-27 T 15-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XDD1_3071 c6403acdf1dc7bac33421b1c2833907a 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 167.167 T 15-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XDD1_3071 c6403acdf1dc7bac33421b1c2833907a 264 PIRSF PIRSF001356 1 263 6.5E-148 T 15-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XDD1_3071 c6403acdf1dc7bac33421b1c2833907a 264 SUPERFAMILY SSF56276 43 173 4.71E-21 T 15-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 XDD1_3171 48d89811a1963e4cc05413ca3626f84e 249 SUPERFAMILY SSF52402 26 213 1.54E-52 T 15-10-2018 XDD1_3171 48d89811a1963e4cc05413ca3626f84e 249 Gene3D G3DSA:3.40.50.620 7 221 9.6E-64 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_3171 48d89811a1963e4cc05413ca3626f84e 249 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 14 248 39.032 T 15-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 XDD1_3171 48d89811a1963e4cc05413ca3626f84e 249 PIRSF PIRSF000857 7 249 1.3E-54 T 15-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 XDD1_3171 48d89811a1963e4cc05413ca3626f84e 249 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 53 224 2.1E-50 T 15-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 XDD1_3171 48d89811a1963e4cc05413ca3626f84e 249 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 38 248 1.3E-87 T 15-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 XDD1_3171 48d89811a1963e4cc05413ca3626f84e 249 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 26 247 2.1E-92 T 15-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 XDD1_2512 332186746e00e9207618c897c366b530 208 Pfam PF13460 NAD(P)H-binding 8 188 3.8E-42 T 15-10-2018 IPR016040 NAD(P)-binding domain XDD1_2512 332186746e00e9207618c897c366b530 208 SUPERFAMILY SSF51735 2 202 2.76E-32 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2512 332186746e00e9207618c897c366b530 208 Gene3D G3DSA:3.40.50.720 1 203 4.3E-39 T 15-10-2018 XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 Pfam PF09078 CheY binding 189 251 7.8E-24 T 15-10-2018 IPR015162 CheY binding XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 SMART SM01231 338 401 2.1E-22 T 15-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 SUPERFAMILY SSF55874 404 584 1.83E-34 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 SMART SM00073 3 100 2.0E-28 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 Gene3D G3DSA:2.30.30.40 586 714 1.4E-36 T 15-10-2018 XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 Gene3D G3DSA:2.40.50.180 609 673 1.4E-36 T 15-10-2018 XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 338 401 1.5E-18 T 15-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 Pfam PF01584 CheW-like domain 591 717 5.5E-24 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 449 585 1.0E-15 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 SUPERFAMILY SSF50341 585 717 1.09E-29 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 SMART SM00260 578 718 7.2E-38 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 Pfam PF01627 Hpt domain 7 102 4.3E-19 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 505 7.4E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 583 7.4E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 564 7.4E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 540 7.4E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 Gene3D G3DSA:1.10.287.560 338 401 5.2E-18 T 15-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 Gene3D G3DSA:1.20.120.160 1 142 3.1E-43 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 SUPERFAMILY SSF47226 5 124 9.81E-32 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 SUPERFAMILY SSF47384 339 402 2.28E-15 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 Gene3D G3DSA:3.30.565.10 402 585 3.4E-54 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 SMART SM00387 446 586 1.9E-25 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 Gene3D G3DSA:3.30.70.400 171 252 1.3E-24 T 15-10-2018 IPR035891 CheY-binding domain of CheA XDD1_2374 332aa9ac557a42e02bf0e4f3a51df7aa 736 SUPERFAMILY SSF55052 188 251 2.48E-19 T 15-10-2018 IPR035891 CheY-binding domain of CheA XDD1_2342 9a023720b1b62b8a6de8c0540a821e4f 146 Gene3D G3DSA:1.20.58.300 3 119 7.5E-13 T 15-10-2018 XDD1_2342 9a023720b1b62b8a6de8c0540a821e4f 146 Pfam PF05130 FlgN protein 1 134 4.8E-27 T 15-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 XDD1_2342 9a023720b1b62b8a6de8c0540a821e4f 146 SUPERFAMILY SSF140566 1 118 1.57E-16 T 15-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 XDD1_0328 86a125e9c5a8f2d989cc91589337857e 514 SMART SM00382 216 396 3.8E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0328 86a125e9c5a8f2d989cc91589337857e 514 Gene3D G3DSA:3.30.230.10 1 168 3.8E-6 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XDD1_0328 86a125e9c5a8f2d989cc91589337857e 514 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 7.7E-45 T 15-10-2018 XDD1_0328 86a125e9c5a8f2d989cc91589337857e 514 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 500 1.2E-212 T 15-10-2018 IPR004482 Mg chelatase-related protein XDD1_0328 86a125e9c5a8f2d989cc91589337857e 514 SUPERFAMILY SSF54211 10 169 7.21E-31 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_0328 86a125e9c5a8f2d989cc91589337857e 514 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 295 309 1.6E-7 T 15-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 XDD1_0328 86a125e9c5a8f2d989cc91589337857e 514 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 347 359 1.6E-7 T 15-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 XDD1_0328 86a125e9c5a8f2d989cc91589337857e 514 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 215 230 1.6E-7 T 15-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 XDD1_0328 86a125e9c5a8f2d989cc91589337857e 514 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 323 336 1.6E-7 T 15-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 XDD1_0328 86a125e9c5a8f2d989cc91589337857e 514 SUPERFAMILY SSF52540 196 510 3.23E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0328 86a125e9c5a8f2d989cc91589337857e 514 Gene3D G3DSA:3.40.50.300 180 505 1.3E-57 T 15-10-2018 XDD1_0328 86a125e9c5a8f2d989cc91589337857e 514 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 408 500 3.2E-27 T 15-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain XDD1_0328 86a125e9c5a8f2d989cc91589337857e 514 Pfam PF01078 Magnesium chelatase, subunit ChlI 196 395 3.8E-91 T 15-10-2018 IPR000523 Magnesium chelatase ChlI domain XDD1_1490 9cc4b8ae9da70c99c775fa22d8592b25 150 SUPERFAMILY SSF55724 8 143 5.75E-31 T 15-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich XDD1_1490 9cc4b8ae9da70c99c775fa22d8592b25 150 Gene3D G3DSA:3.40.1000.10 5 147 5.4E-37 T 15-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich XDD1_1490 9cc4b8ae9da70c99c775fa22d8592b25 150 Pfam PF08786 DcrB 14 139 4.7E-34 T 15-10-2018 IPR014894 Protein DcrB XDD1_0765 9c634f9b9b7eb5d8f87faf6dbd7d8f1f 154 SUPERFAMILY SSF46458 6 119 1.23E-22 T 15-10-2018 IPR009050 Globin-like superfamily XDD1_0765 9c634f9b9b7eb5d8f87faf6dbd7d8f1f 154 Pfam PF01152 Bacterial-like globin 7 105 5.0E-13 T 15-10-2018 IPR001486 Truncated hemoglobin GO:0019825 XDD1_0765 9c634f9b9b7eb5d8f87faf6dbd7d8f1f 154 Gene3D G3DSA:1.10.490.10 4 129 8.9E-27 T 15-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 XDD1_3197 42e955cbf0bc797e0084f2ad0a03ae56 546 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 538 56.773 T 15-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 XDD1_3197 42e955cbf0bc797e0084f2ad0a03ae56 546 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 444 2.0E-176 T 15-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 XDD1_3197 42e955cbf0bc797e0084f2ad0a03ae56 546 SUPERFAMILY SSF56112 94 434 2.9E-50 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily XDD1_3197 42e955cbf0bc797e0084f2ad0a03ae56 546 Pfam PF03109 ABC1 family 113 230 3.7E-35 T 15-10-2018 IPR004147 UbiB domain XDD1_3361 e0f0f19e6a58fecbf893e218e4ac2ddb 1216 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 6 1207 0.0 T 15-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 XDD1_3361 e0f0f19e6a58fecbf893e218e4ac2ddb 1216 Gene3D G3DSA:1.10.486.10 594 739 4.9E-168 T 15-10-2018 XDD1_3361 e0f0f19e6a58fecbf893e218e4ac2ddb 1216 Pfam PF13361 UvrD-like helicase C-terminal domain 451 642 7.2E-9 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 XDD1_3361 e0f0f19e6a58fecbf893e218e4ac2ddb 1216 SUPERFAMILY SSF52980 918 1208 1.18E-87 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 XDD1_3361 e0f0f19e6a58fecbf893e218e4ac2ddb 1216 Gene3D G3DSA:3.40.50.300 6 446 1.0E-163 T 15-10-2018 XDD1_3361 e0f0f19e6a58fecbf893e218e4ac2ddb 1216 SUPERFAMILY SSF52540 14 833 2.49E-108 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3361 e0f0f19e6a58fecbf893e218e4ac2ddb 1216 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 447 6.9E-60 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 XDD1_3361 e0f0f19e6a58fecbf893e218e4ac2ddb 1216 Pfam PF13361 UvrD-like helicase C-terminal domain 694 823 1.4E-10 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 XDD1_3361 e0f0f19e6a58fecbf893e218e4ac2ddb 1216 Gene3D G3DSA:3.90.320.10 908 1215 5.0E-107 T 15-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal XDD1_3361 e0f0f19e6a58fecbf893e218e4ac2ddb 1216 Gene3D G3DSA:1.10.3170.10 155 348 1.0E-163 T 15-10-2018 XDD1_3361 e0f0f19e6a58fecbf893e218e4ac2ddb 1216 Gene3D G3DSA:3.40.50.300 455 861 4.9E-168 T 15-10-2018 XDD1_3361 e0f0f19e6a58fecbf893e218e4ac2ddb 1216 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 4 1208 22.694 T 15-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 XDD1_3361 e0f0f19e6a58fecbf893e218e4ac2ddb 1216 Pfam PF12705 PD-(D/E)XK nuclease superfamily 984 1202 2.0E-6 T 15-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type XDD1_2805 de16750d44dc9a5c352a9a5cd9c357cc 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XDD1_2805 de16750d44dc9a5c352a9a5cd9c357cc 86 Pfam PF12838 4Fe-4S dicluster domain 8 55 1.3E-6 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XDD1_2805 de16750d44dc9a5c352a9a5cd9c357cc 86 SUPERFAMILY SSF54862 5 74 4.19E-17 T 15-10-2018 XDD1_2805 de16750d44dc9a5c352a9a5cd9c357cc 86 Gene3D G3DSA:3.30.70.20 2 86 4.4E-36 T 15-10-2018 XDD1_2773 9059ab2b8448cd038dd4e945068aad00 392 Gene3D G3DSA:3.20.20.70 87 357 1.9E-112 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_2773 9059ab2b8448cd038dd4e945068aad00 392 Gene3D G3DSA:1.10.150.530 11 86 5.8E-30 T 15-10-2018 XDD1_2773 9059ab2b8448cd038dd4e945068aad00 392 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 22 377 9.1E-170 T 15-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 XDD1_2773 9059ab2b8448cd038dd4e945068aad00 392 Pfam PF04055 Radical SAM superfamily 128 296 1.0E-17 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XDD1_2773 9059ab2b8448cd038dd4e945068aad00 392 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 25 372 74.03 T 15-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 XDD1_2773 9059ab2b8448cd038dd4e945068aad00 392 SUPERFAMILY SSF102114 124 336 7.32E-14 T 15-10-2018 XDD1_2773 9059ab2b8448cd038dd4e945068aad00 392 PIRSF PIRSF006004 18 385 1.5E-145 T 15-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 XDD1_3636 cbfeffa0d01e9f84e91a3991fc5acebd 369 Pfam PF00005 ABC transporter 20 161 8.2E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_3636 cbfeffa0d01e9f84e91a3991fc5acebd 369 Gene3D G3DSA:2.40.50.140 288 345 3.4E-47 T 15-10-2018 XDD1_3636 cbfeffa0d01e9f84e91a3991fc5acebd 369 Gene3D G3DSA:2.40.50.100 240 362 3.4E-47 T 15-10-2018 XDD1_3636 cbfeffa0d01e9f84e91a3991fc5acebd 369 SUPERFAMILY SSF50331 236 363 8.02E-31 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal XDD1_3636 cbfeffa0d01e9f84e91a3991fc5acebd 369 SUPERFAMILY SSF52540 4 243 1.06E-86 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3636 cbfeffa0d01e9f84e91a3991fc5acebd 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_3636 cbfeffa0d01e9f84e91a3991fc5acebd 369 Gene3D G3DSA:3.40.50.300 1 238 5.5E-78 T 15-10-2018 XDD1_3636 cbfeffa0d01e9f84e91a3991fc5acebd 369 SMART SM00382 28 211 5.9E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3636 cbfeffa0d01e9f84e91a3991fc5acebd 369 Pfam PF08402 TOBE domain 281 353 4.6E-11 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 XDD1_2611 41b8e28a6ed522a4ed779c7af4e60485 300 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 9 159 1.9E-17 T 15-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 XDD1_2611 41b8e28a6ed522a4ed779c7af4e60485 300 Pfam PF02195 ParB-like nuclease domain 19 101 1.7E-11 T 15-10-2018 IPR003115 ParB/Sulfiredoxin XDD1_2611 41b8e28a6ed522a4ed779c7af4e60485 300 SMART SM00470 12 101 3.0E-14 T 15-10-2018 IPR003115 ParB/Sulfiredoxin XDD1_2611 41b8e28a6ed522a4ed779c7af4e60485 300 Gene3D G3DSA:1.10.10.2830 88 199 2.1E-7 T 15-10-2018 XDD1_2611 41b8e28a6ed522a4ed779c7af4e60485 300 Pfam PF07506 RepB plasmid partitioning protein 102 211 4.3E-7 T 15-10-2018 IPR011111 RepB plasmid partition XDD1_2611 41b8e28a6ed522a4ed779c7af4e60485 300 SUPERFAMILY SSF110849 11 138 1.64E-16 T 15-10-2018 IPR036086 ParB/Sulfiredoxin superfamily XDD1_2611 41b8e28a6ed522a4ed779c7af4e60485 300 Gene3D G3DSA:3.90.1530.30 25 87 7.6E-8 T 15-10-2018 XDD1_1560 9cd9d5b9435643751e1341f180813b87 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 159 8.3E-15 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_1560 9cd9d5b9435643751e1341f180813b87 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 1.1E-63 T 15-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal XDD1_1560 9cd9d5b9435643751e1341f180813b87 447 SMART SM00382 49 165 2.9E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1560 9cd9d5b9435643751e1341f180813b87 447 SUPERFAMILY SSF52540 6 236 3.73E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1560 9cd9d5b9435643751e1341f180813b87 447 Gene3D G3DSA:3.40.50.300 1 164 1.1E-47 T 15-10-2018 XDD1_1560 9cd9d5b9435643751e1341f180813b87 447 SUPERFAMILY SSF48019 252 434 7.94E-70 T 15-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 XDD1_1560 9cd9d5b9435643751e1341f180813b87 447 Gene3D G3DSA:1.20.272.10 241 345 3.6E-43 T 15-10-2018 XDD1_1560 9cd9d5b9435643751e1341f180813b87 447 Gene3D G3DSA:1.10.3710.10 346 447 4.2E-37 T 15-10-2018 XDD1_1560 9cd9d5b9435643751e1341f180813b87 447 Pfam PF16193 AAA C-terminal domain 188 267 4.7E-22 T 15-10-2018 IPR032423 AAA C-terminal domain XDD1_1560 9cd9d5b9435643751e1341f180813b87 447 Gene3D G3DSA:1.10.8.60 165 240 1.8E-26 T 15-10-2018 XDD1_0111 8d4b3394bb93fc78aa6e05f1144cf8a7 132 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 5 120 1.5E-25 T 15-10-2018 IPR006440 Death on curing protein GO:0016301 XDD1_0111 8d4b3394bb93fc78aa6e05f1144cf8a7 132 SUPERFAMILY SSF140931 5 93 4.32E-9 T 15-10-2018 IPR036597 Fido-like domain superfamily XDD1_0111 8d4b3394bb93fc78aa6e05f1144cf8a7 132 Pfam PF02661 Fic/DOC family 3 84 4.6E-10 T 15-10-2018 IPR003812 Fido domain XDD1_0111 8d4b3394bb93fc78aa6e05f1144cf8a7 132 Gene3D G3DSA:1.20.120.1870 1 129 2.2E-44 T 15-10-2018 XDD1_0111 8d4b3394bb93fc78aa6e05f1144cf8a7 132 PIRSF PIRSF018297 1 127 1.3E-39 T 15-10-2018 IPR006440 Death on curing protein GO:0016301 XDD1_0944 f0cddca9884dcde2f8e646fe4ad7e1a2 70 Gene3D G3DSA:3.10.290.10 1 68 1.1E-24 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XDD1_0944 f0cddca9884dcde2f8e646fe4ad7e1a2 70 Pfam PF13275 S4 domain 10 68 2.7E-23 T 15-10-2018 XDD1_0944 f0cddca9884dcde2f8e646fe4ad7e1a2 70 SUPERFAMILY SSF55174 5 68 8.37E-18 T 15-10-2018 XDD1_2511 d85a08989f6e769d8474b0e681de2a66 1064 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 2.3E-168 T 15-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 XDD1_2511 d85a08989f6e769d8474b0e681de2a66 1064 Gene3D G3DSA:2.40.50.140 32 125 1.3E-33 T 15-10-2018 XDD1_2511 d85a08989f6e769d8474b0e681de2a66 1064 Gene3D G3DSA:3.40.1260.20 401 510 2.6E-41 T 15-10-2018 XDD1_2511 d85a08989f6e769d8474b0e681de2a66 1064 SMART SM00316 37 119 2.1E-12 T 15-10-2018 IPR022967 RNA-binding domain, S1 XDD1_2511 d85a08989f6e769d8474b0e681de2a66 1064 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1025 1061 1.3E-17 T 15-10-2018 IPR021968 Polyribonucleotide phosphorylase C-terminal XDD1_2511 d85a08989f6e769d8474b0e681de2a66 1064 Pfam PF10150 Ribonuclease E/G family 121 391 5.5E-91 T 15-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 XDD1_2511 d85a08989f6e769d8474b0e681de2a66 1064 Hamap MF_00970 Ribonuclease E [rne]. 1 1050 36.058 T 15-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 XDD1_2511 d85a08989f6e769d8474b0e681de2a66 1064 Pfam PF00575 S1 RNA binding domain 36 118 9.9E-16 T 15-10-2018 IPR003029 S1 domain GO:0003676 XDD1_2511 d85a08989f6e769d8474b0e681de2a66 1064 SUPERFAMILY SSF50249 40 124 5.15E-21 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_3022 46c254072fe61fe4be751470bd1ab03b 460 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 455 33.635 T 15-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XDD1_3022 46c254072fe61fe4be751470bd1ab03b 460 Gene3D G3DSA:3.40.1390.10 1 86 5.9E-26 T 15-10-2018 XDD1_3022 46c254072fe61fe4be751470bd1ab03b 460 SUPERFAMILY SSF63418 1 103 1.96E-24 T 15-10-2018 IPR035911 MurE/MurF, N-terminal XDD1_3022 46c254072fe61fe4be751470bd1ab03b 460 Pfam PF08245 Mur ligase middle domain 112 301 4.1E-46 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XDD1_3022 46c254072fe61fe4be751470bd1ab03b 460 Gene3D G3DSA:3.40.1190.10 87 319 7.7E-79 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XDD1_3022 46c254072fe61fe4be751470bd1ab03b 460 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 35 454 8.5E-137 T 15-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XDD1_3022 46c254072fe61fe4be751470bd1ab03b 460 Pfam PF01225 Mur ligase family, catalytic domain 29 87 6.0E-10 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 XDD1_3022 46c254072fe61fe4be751470bd1ab03b 460 SUPERFAMILY SSF53623 106 318 1.24E-52 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XDD1_3022 46c254072fe61fe4be751470bd1ab03b 460 Gene3D G3DSA:3.90.190.20 320 460 5.8E-45 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XDD1_3022 46c254072fe61fe4be751470bd1ab03b 460 SUPERFAMILY SSF53244 321 454 2.52E-38 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XDD1_3022 46c254072fe61fe4be751470bd1ab03b 460 Pfam PF02875 Mur ligase family, glutamate ligase domain 321 401 3.1E-12 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 XDD1_3161 99ee8d9914e8852f7df1265822d8f723 254 SUPERFAMILY SSF64167 2 247 5.23E-80 T 15-10-2018 XDD1_3161 99ee8d9914e8852f7df1265822d8f723 254 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 2 250 38.889 T 15-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 XDD1_3161 99ee8d9914e8852f7df1265822d8f723 254 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 3 233 6.7E-72 T 15-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 XDD1_3161 99ee8d9914e8852f7df1265822d8f723 254 Pfam PF01975 Survival protein SurE 4 182 2.9E-57 T 15-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 XDD1_3161 99ee8d9914e8852f7df1265822d8f723 254 Gene3D G3DSA:3.40.1210.10 1 253 3.5E-98 T 15-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 XDD1_0067 92ed09143985aacd2885e5d18095619a 224 PIRSF PIRSF001461 1 224 9.0E-107 T 15-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XDD1_0067 92ed09143985aacd2885e5d18095619a 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XDD1_0067 92ed09143985aacd2885e5d18095619a 224 Gene3D G3DSA:3.20.20.70 6 223 1.9E-85 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_0067 92ed09143985aacd2885e5d18095619a 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 137 159 - T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XDD1_0067 92ed09143985aacd2885e5d18095619a 224 SUPERFAMILY SSF51366 5 219 6.12E-77 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XDD1_0067 92ed09143985aacd2885e5d18095619a 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 217 7.4E-99 T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XDD1_0067 92ed09143985aacd2885e5d18095619a 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 204 4.5E-92 T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XDD1_1738 a641a8084d52162d6b65f46cca6d40fb 76 Gene3D G3DSA:1.20.58.250 1 76 1.0E-39 T 15-10-2018 IPR036745 DNA polymerase III-theta superfamily GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_1738 a641a8084d52162d6b65f46cca6d40fb 76 Pfam PF06440 DNA polymerase III, theta subunit 2 71 3.7E-40 T 15-10-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_1738 a641a8084d52162d6b65f46cca6d40fb 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 1 74 8.0E-30 T 15-10-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_1738 a641a8084d52162d6b65f46cca6d40fb 76 SUPERFAMILY SSF46575 1 75 1.19E-35 T 15-10-2018 XDD1_2233 457aa4941f055cf638be85bb3e759bd3 306 SUPERFAMILY SSF161098 88 290 5.36E-21 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_2233 457aa4941f055cf638be85bb3e759bd3 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.1E-37 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_2233 457aa4941f055cf638be85bb3e759bd3 306 Gene3D G3DSA:1.10.3720.10 84 301 1.3E-20 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_2798 d31b68acfbf95945dbca6c77bda9e225 546 SUPERFAMILY SSF47384 303 384 2.16E-15 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XDD1_2798 d31b68acfbf95945dbca6c77bda9e225 546 SUPERFAMILY SSF55874 392 541 6.94E-31 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_2798 d31b68acfbf95945dbca6c77bda9e225 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 482 5.1E-7 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2798 d31b68acfbf95945dbca6c77bda9e225 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 521 5.1E-7 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2798 d31b68acfbf95945dbca6c77bda9e225 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 496 5.1E-7 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2798 d31b68acfbf95945dbca6c77bda9e225 546 SMART SM00387 431 543 5.6E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_2798 d31b68acfbf95945dbca6c77bda9e225 546 Gene3D G3DSA:1.10.287.130 263 384 1.8E-18 T 15-10-2018 XDD1_2798 d31b68acfbf95945dbca6c77bda9e225 546 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 434 542 4.2E-14 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_2798 d31b68acfbf95945dbca6c77bda9e225 546 SMART SM00388 320 388 2.5E-16 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_2798 d31b68acfbf95945dbca6c77bda9e225 546 Pfam PF00512 His Kinase A (phospho-acceptor) domain 321 384 1.4E-12 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_2798 d31b68acfbf95945dbca6c77bda9e225 546 Gene3D G3DSA:3.30.565.10 392 546 2.0E-28 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_3662 e0d748b6f3e622441b6c13084270ef27 302 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 188 205 - T 15-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 XDD1_3662 e0d748b6f3e622441b6c13084270ef27 302 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 5 298 43.87 T 15-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 XDD1_3662 e0d748b6f3e622441b6c13084270ef27 302 SUPERFAMILY SSF53697 8 252 7.12E-74 T 15-10-2018 XDD1_3662 e0d748b6f3e622441b6c13084270ef27 302 Pfam PF01380 SIS domain 132 211 1.5E-8 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XDD1_3662 e0d748b6f3e622441b6c13084270ef27 302 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 9 298 4.3E-132 T 15-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 XDD1_3662 e0d748b6f3e622441b6c13084270ef27 302 Gene3D G3DSA:3.40.50.10490 2 221 8.5E-87 T 15-10-2018 XDD1_3662 e0d748b6f3e622441b6c13084270ef27 302 Gene3D G3DSA:1.10.8.1080 222 300 2.9E-31 T 15-10-2018 XDD1_0721 4dd5302786540553d1d131ff140e7f4f 337 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XDD1_0721 4dd5302786540553d1d131ff140e7f4f 337 SUPERFAMILY SSF53335 152 329 2.64E-26 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_0721 4dd5302786540553d1d131ff140e7f4f 337 Pfam PF05175 Methyltransferase small domain 167 333 5.7E-59 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 XDD1_0721 4dd5302786540553d1d131ff140e7f4f 337 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 44.715 T 15-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 XDD1_0721 4dd5302786540553d1d131ff140e7f4f 337 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 7.2E-55 T 15-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 XDD1_0721 4dd5302786540553d1d131ff140e7f4f 337 Gene3D G3DSA:3.40.50.150 1 158 3.0E-53 T 15-10-2018 XDD1_0721 4dd5302786540553d1d131ff140e7f4f 337 Gene3D G3DSA:3.40.50.150 159 337 8.1E-45 T 15-10-2018 XDD1_1747 02f25026294b9966b545cb1bf8b9ca0a 236 SUPERFAMILY SSF48657 5 119 3.92E-38 T 15-10-2018 IPR036442 ProQ/FinO domain superfamily XDD1_1747 02f25026294b9966b545cb1bf8b9ca0a 236 Pfam PF17516 ProQ C-terminal domain 187 235 4.6E-22 T 15-10-2018 IPR035236 RNA chaperone ProQ, C-terminal XDD1_1747 02f25026294b9966b545cb1bf8b9ca0a 236 Gene3D G3DSA:1.10.1710.10 1 122 1.1E-23 T 15-10-2018 IPR036442 ProQ/FinO domain superfamily XDD1_1747 02f25026294b9966b545cb1bf8b9ca0a 236 Pfam PF04352 ProQ/FINO family 8 115 6.2E-42 T 15-10-2018 IPR016103 ProQ/FinO domain XDD1_1747 02f25026294b9966b545cb1bf8b9ca0a 236 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 236 30.255 T 15-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 XDD1_1747 02f25026294b9966b545cb1bf8b9ca0a 236 SMART SM00945 5 119 1.2E-60 T 15-10-2018 IPR016103 ProQ/FinO domain XDD1_1580 046e5c5af3c74fd7758eb41f21e5868e 249 SUPERFAMILY SSF53448 1 245 5.18E-63 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_1580 046e5c5af3c74fd7758eb41f21e5868e 249 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 2 240 2.9E-121 T 15-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 XDD1_1580 046e5c5af3c74fd7758eb41f21e5868e 249 Pfam PF02348 Cytidylyltransferase 4 220 8.6E-69 T 15-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 XDD1_1580 046e5c5af3c74fd7758eb41f21e5868e 249 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 247 44.389 T 15-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 XDD1_1580 046e5c5af3c74fd7758eb41f21e5868e 249 Gene3D G3DSA:3.90.550.10 1 247 1.4E-93 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_1615 b1e30f9f43667b19fff86a765aa7b14b 461 Gene3D G3DSA:3.40.50.300 1 175 4.5E-18 T 15-10-2018 XDD1_1615 b1e30f9f43667b19fff86a765aa7b14b 461 Pfam PF13671 AAA domain 6 129 4.8E-10 T 15-10-2018 XDD1_1615 b1e30f9f43667b19fff86a765aa7b14b 461 SUPERFAMILY SSF52540 2 175 6.07E-14 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2516 8bebf2965503bc045789f4fac2220901 462 Pfam PF13520 Amino acid permease 30 422 3.2E-40 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XDD1_2516 8bebf2965503bc045789f4fac2220901 462 PIRSF PIRSF006060 6 457 3.6E-74 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XDD1_2516 8bebf2965503bc045789f4fac2220901 462 Gene3D G3DSA:1.20.1740.10 24 459 2.1E-70 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1629 2043 5.7E-138 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 531 945 5.8E-138 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3820 4248 1.1E-136 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2730 3133 3.3E-133 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:3.40.50.12780 3792 4216 8.6E-143 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:1.10.1200.10 3208 3289 1.6E-23 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:1.10.1200.10 2117 2200 7.1E-25 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:1.10.1200.10 1020 1102 5.5E-24 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SUPERFAMILY SSF56801 2667 3232 2.49E-167 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 ProSitePatterns PS00455 Putative AMP-binding domain signature. 662 673 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SUPERFAMILY SSF52777 2244 2441 1.22E-32 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SUPERFAMILY SSF52777 233 497 2.89E-65 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2854 2865 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SUPERFAMILY SSF56801 1567 2142 4.45E-163 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:3.30.559.30 3523 3785 9.0E-46 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SUPERFAMILY SSF56801 468 1044 3.79E-163 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:1.10.1200.10 4321 4403 2.0E-25 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:3.40.50.1820 4689 4957 5.6E-54 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SUPERFAMILY SSF56801 3758 4347 2.88E-165 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Pfam PF00975 Thioesterase domain 4423 4673 2.1E-29 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Pfam PF00975 Thioesterase domain 4700 4938 6.2E-30 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SUPERFAMILY SSF47336 3211 3283 4.58E-17 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SUPERFAMILY SSF47336 2121 2193 1.7E-18 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:3.30.300.30 4218 4320 1.2E-35 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:3.30.300.30 2013 2116 1.0E-35 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:3.30.559.10 45 419 2.8E-156 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Pfam PF00550 Phosphopantetheine attachment site 4336 4395 5.9E-13 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Pfam PF00550 Phosphopantetheine attachment site 3222 3282 6.1E-8 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Pfam PF00550 Phosphopantetheine attachment site 1034 1094 1.2E-9 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Pfam PF00550 Phosphopantetheine attachment site 2132 2192 3.2E-12 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Pfam PF13193 AMP-binding enzyme C-terminal domain 929 1004 5.3E-13 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Pfam PF13193 AMP-binding enzyme C-terminal domain 4232 4307 1.2E-13 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Pfam PF13193 AMP-binding enzyme C-terminal domain 2027 2102 8.8E-13 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Pfam PF13193 AMP-binding enzyme C-terminal domain 3117 3192 4.5E-14 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SMART SM00824 Thioesterase 4702 4950 1.7E-6 T 15-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:3.30.559.30 2427 2684 1.7E-85 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:3.40.50.12780 500 913 9.1E-148 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:3.40.50.12780 1598 2011 1.0E-147 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:3.40.50.12780 2698 3101 3.8E-140 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Pfam PF00668 Condensation domain 1148 1588 1.6E-51 T 15-10-2018 IPR001242 Condensation domain XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Pfam PF00668 Condensation domain 44 490 1.4E-111 T 15-10-2018 IPR001242 Condensation domain XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Pfam PF00668 Condensation domain 2246 2689 3.1E-52 T 15-10-2018 IPR001242 Condensation domain XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Pfam PF00668 Condensation domain 3336 3779 9.8E-56 T 15-10-2018 IPR001242 Condensation domain XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SMART SM00823 Phosphopantetheine attachment site 2129 2197 5.0E-4 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SMART SM00823 Phosphopantetheine attachment site 4334 4402 0.0071 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SMART SM00823 Phosphopantetheine attachment site 3219 3287 0.077 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SMART SM00823 Phosphopantetheine attachment site 1031 1099 0.037 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1760 1771 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SUPERFAMILY SSF53474 4682 4953 4.65E-54 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:3.30.559.10 2252 2618 1.7E-85 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:3.30.559.10 1154 1518 1.4E-85 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SUPERFAMILY SSF52777 1331 1595 6.56E-42 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SUPERFAMILY SSF52777 1147 1343 4.89E-31 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SUPERFAMILY SSF52777 39 245 7.34E-48 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SUPERFAMILY SSF47336 1023 1095 2.49E-17 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:3.40.50.1820 4408 4678 6.3E-55 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SUPERFAMILY SSF52777 2429 2696 2.78E-42 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SUPERFAMILY SSF47336 4326 4395 1.83E-19 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SUPERFAMILY SSF53474 4411 4679 1.99E-50 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SUPERFAMILY SSF52777 3334 3531 2.56E-32 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:3.30.559.30 229 475 2.8E-156 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:3.30.300.30 3104 3207 2.5E-37 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:3.30.300.30 916 1019 2.8E-35 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Pfam PF00501 AMP-binding enzyme 1609 2019 1.7E-106 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Pfam PF00501 AMP-binding enzyme 2709 3109 1.6E-105 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Pfam PF00501 AMP-binding enzyme 3799 4224 3.2E-106 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Pfam PF00501 AMP-binding enzyme 511 921 3.9E-106 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:3.30.559.30 1329 1584 1.4E-85 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 SUPERFAMILY SSF52777 3519 3786 6.89E-44 T 15-10-2018 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 Gene3D G3DSA:3.30.559.10 3332 3522 3.5E-38 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4358 4373 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_2288 1de95e57e34e9f19e2d9e635fc99f7ec 4960 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3946 3957 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_3524 dfebf58ccabd48fa11b52b9a7ea14226 187 PIRSF PIRSF006118 12 187 2.1E-73 T 15-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XDD1_3524 dfebf58ccabd48fa11b52b9a7ea14226 187 Gene3D G3DSA:3.40.50.1000 2 187 7.0E-61 T 15-10-2018 IPR023214 HAD superfamily XDD1_3524 dfebf58ccabd48fa11b52b9a7ea14226 187 Pfam PF08282 haloacid dehalogenase-like hydrolase 94 158 3.6E-10 T 15-10-2018 XDD1_3524 dfebf58ccabd48fa11b52b9a7ea14226 187 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 25 178 5.4E-71 T 15-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XDD1_3524 dfebf58ccabd48fa11b52b9a7ea14226 187 SUPERFAMILY SSF56784 21 179 5.91E-42 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_2672 946a1e09b30bfe55728d2d60933ba919 498 Gene3D G3DSA:3.40.309.10 250 440 4.9E-137 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 XDD1_2672 946a1e09b30bfe55728d2d60933ba919 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 XDD1_2672 946a1e09b30bfe55728d2d60933ba919 498 SUPERFAMILY SSF53720 4 458 2.62E-117 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XDD1_2672 946a1e09b30bfe55728d2d60933ba919 498 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 7 489 6.4E-249 T 15-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 XDD1_2672 946a1e09b30bfe55728d2d60933ba919 498 Gene3D G3DSA:3.40.605.10 10 452 4.9E-137 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 XDD1_2672 946a1e09b30bfe55728d2d60933ba919 498 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 4 489 56.407 T 15-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 XDD1_2672 946a1e09b30bfe55728d2d60933ba919 498 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 XDD1_2672 946a1e09b30bfe55728d2d60933ba919 498 Pfam PF00171 Aldehyde dehydrogenase family 12 463 2.7E-113 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 XDD1_0289 9beea8df457af572266735127ef8b372 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.473 T 15-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0289 9beea8df457af572266735127ef8b372 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 1.6E-38 T 15-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0289 9beea8df457af572266735127ef8b372 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 3.0E-35 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0289 9beea8df457af572266735127ef8b372 84 SUPERFAMILY SSF50249 5 82 3.73E-33 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_0289 9beea8df457af572266735127ef8b372 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 5.3E-14 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0289 9beea8df457af572266735127ef8b372 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 5.3E-14 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0289 9beea8df457af572266735127ef8b372 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 5.3E-14 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0289 9beea8df457af572266735127ef8b372 84 Pfam PF00366 Ribosomal protein S17 10 76 5.2E-34 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0289 9beea8df457af572266735127ef8b372 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 15-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0289 9beea8df457af572266735127ef8b372 84 Gene3D G3DSA:2.40.50.140 1 84 9.6E-40 T 15-10-2018 XDD1_2159 d28321b193fe22221218f5c536032796 303 SUPERFAMILY SSF46785 10 87 3.19E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_2159 d28321b193fe22221218f5c536032796 303 SUPERFAMILY SSF53850 93 299 4.71E-45 T 15-10-2018 XDD1_2159 d28321b193fe22221218f5c536032796 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.9E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2159 d28321b193fe22221218f5c536032796 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.9E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2159 d28321b193fe22221218f5c536032796 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.9E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2159 d28321b193fe22221218f5c536032796 303 Gene3D G3DSA:1.10.10.10 6 92 1.7E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2159 d28321b193fe22221218f5c536032796 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 65 1.6E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2159 d28321b193fe22221218f5c536032796 303 Gene3D G3DSA:3.40.190.290 94 297 1.4E-61 T 15-10-2018 XDD1_2159 d28321b193fe22221218f5c536032796 303 Pfam PF03466 LysR substrate binding domain 92 296 1.9E-43 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_0199 50758350bcfbb0ccfdb2280a0aec86fc 732 SMART SM00490 492 589 2.5E-9 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_0199 50758350bcfbb0ccfdb2280a0aec86fc 732 Pfam PF00271 Helicase conserved C-terminal domain 521 589 1.1E-5 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_0199 50758350bcfbb0ccfdb2280a0aec86fc 732 TIGRFAM TIGR00595 priA: primosomal protein N' 221 729 8.4E-206 T 15-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 XDD1_0199 50758350bcfbb0ccfdb2280a0aec86fc 732 SUPERFAMILY SSF52540 219 601 2.91E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0199 50758350bcfbb0ccfdb2280a0aec86fc 732 Pfam PF00270 DEAD/DEAH box helicase 221 363 7.7E-14 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XDD1_0199 50758350bcfbb0ccfdb2280a0aec86fc 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 732 25.528 T 15-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 XDD1_0199 50758350bcfbb0ccfdb2280a0aec86fc 732 Gene3D G3DSA:1.10.8.630 2 112 1.3E-37 T 15-10-2018 XDD1_0199 50758350bcfbb0ccfdb2280a0aec86fc 732 SMART SM00487 195 380 6.9E-15 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XDD1_0199 50758350bcfbb0ccfdb2280a0aec86fc 732 Gene3D G3DSA:3.40.50.300 184 379 2.0E-81 T 15-10-2018 XDD1_0951 451d380b67ac39b9ba43b0dee0d33bf4 84 Gene3D G3DSA:3.40.1620.10 18 51 7.4E-7 T 15-10-2018 XDD1_0951 451d380b67ac39b9ba43b0dee0d33bf4 84 SUPERFAMILY SSF143120 4 61 4.32E-11 T 15-10-2018 IPR036165 YefM-like superfamily XDD1_0951 451d380b67ac39b9ba43b0dee0d33bf4 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 19 53 2.2E-7 T 15-10-2018 XDD1_0951 451d380b67ac39b9ba43b0dee0d33bf4 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 5 62 7.8E-10 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM XDD1_1195 dc0a3326aae49b40efe27fe66d0f9404 714 Pfam PF01553 Acyltransferase 16 137 2.3E-13 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XDD1_1195 dc0a3326aae49b40efe27fe66d0f9404 714 Pfam PF00501 AMP-binding enzyme 233 619 1.5E-66 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_1195 dc0a3326aae49b40efe27fe66d0f9404 714 Gene3D G3DSA:3.40.50.12780 197 614 2.4E-78 T 15-10-2018 XDD1_1195 dc0a3326aae49b40efe27fe66d0f9404 714 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 714 52.497 T 15-10-2018 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 XDD1_1195 dc0a3326aae49b40efe27fe66d0f9404 714 SUPERFAMILY SSF69593 4 176 1.7E-20 T 15-10-2018 XDD1_1195 dc0a3326aae49b40efe27fe66d0f9404 714 ProSitePatterns PS00455 Putative AMP-binding domain signature. 371 382 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_1195 dc0a3326aae49b40efe27fe66d0f9404 714 SMART SM00563 30 140 1.0E-24 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XDD1_1195 dc0a3326aae49b40efe27fe66d0f9404 714 SUPERFAMILY SSF56801 230 713 2.35E-95 T 15-10-2018 XDD1_1195 dc0a3326aae49b40efe27fe66d0f9404 714 Gene3D G3DSA:3.30.300.30 616 714 2.8E-7 T 15-10-2018 XDD1_3921 ccd5714c52fd09d2c7c0a8d2a9e5ea13 177 Pfam PF01883 Iron-sulfur cluster assembly protein 25 76 2.8E-8 T 15-10-2018 IPR002744 MIP18 family-like XDD1_3921 ccd5714c52fd09d2c7c0a8d2a9e5ea13 177 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 33 176 2.9E-56 T 15-10-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit XDD1_3921 ccd5714c52fd09d2c7c0a8d2a9e5ea13 177 Gene3D G3DSA:3.30.300.130 19 116 3.2E-22 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily XDD1_3921 ccd5714c52fd09d2c7c0a8d2a9e5ea13 177 SUPERFAMILY SSF117916 24 116 8.5E-20 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily XDD1_3414 cc69b8f78cfa15caf167c2926af088ed 345 SUPERFAMILY SSF53067 101 314 1.99E-42 T 15-10-2018 XDD1_3414 cc69b8f78cfa15caf167c2926af088ed 345 Gene3D G3DSA:3.30.420.40 129 299 6.5E-132 T 15-10-2018 XDD1_3414 cc69b8f78cfa15caf167c2926af088ed 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.6E-52 T 15-10-2018 IPR017861 Kae1/TsaD family XDD1_3414 cc69b8f78cfa15caf167c2926af088ed 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.6E-52 T 15-10-2018 IPR017861 Kae1/TsaD family XDD1_3414 cc69b8f78cfa15caf167c2926af088ed 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 269 278 1.6E-52 T 15-10-2018 IPR017861 Kae1/TsaD family XDD1_3414 cc69b8f78cfa15caf167c2926af088ed 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.6E-52 T 15-10-2018 IPR017861 Kae1/TsaD family XDD1_3414 cc69b8f78cfa15caf167c2926af088ed 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.6E-52 T 15-10-2018 IPR017861 Kae1/TsaD family XDD1_3414 cc69b8f78cfa15caf167c2926af088ed 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.6E-52 T 15-10-2018 IPR017861 Kae1/TsaD family XDD1_3414 cc69b8f78cfa15caf167c2926af088ed 345 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 312 1.6E-126 T 15-10-2018 IPR017861 Kae1/TsaD family XDD1_3414 cc69b8f78cfa15caf167c2926af088ed 345 Gene3D G3DSA:3.30.420.40 3 320 6.5E-132 T 15-10-2018 XDD1_3414 cc69b8f78cfa15caf167c2926af088ed 345 Pfam PF00814 Glycoprotease family 24 312 2.0E-101 T 15-10-2018 IPR000905 Gcp-like domain XDD1_3414 cc69b8f78cfa15caf167c2926af088ed 345 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 15-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 XDD1_3414 cc69b8f78cfa15caf167c2926af088ed 345 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 337 63.491 T 15-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 XDD1_3414 cc69b8f78cfa15caf167c2926af088ed 345 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 319 1.4E-135 T 15-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 XDD1_3414 cc69b8f78cfa15caf167c2926af088ed 345 SUPERFAMILY SSF53067 3 123 3.24E-31 T 15-10-2018 XDD1_2408 9fba8490794abe273c80ab6573a9a635 211 SMART SM00421 145 202 1.3E-20 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_2408 9fba8490794abe273c80ab6573a9a635 211 SMART SM00448 4 117 1.8E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_2408 9fba8490794abe273c80ab6573a9a635 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 6.6E-15 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_2408 9fba8490794abe273c80ab6573a9a635 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 6.6E-15 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_2408 9fba8490794abe273c80ab6573a9a635 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 6.6E-15 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_2408 9fba8490794abe273c80ab6573a9a635 211 SUPERFAMILY SSF46894 129 205 4.76E-21 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XDD1_2408 9fba8490794abe273c80ab6573a9a635 211 SUPERFAMILY SSF52172 3 134 1.99E-29 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_2408 9fba8490794abe273c80ab6573a9a635 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_2408 9fba8490794abe273c80ab6573a9a635 211 Gene3D G3DSA:3.40.50.12740 5 207 6.0E-56 T 15-10-2018 XDD1_2408 9fba8490794abe273c80ab6573a9a635 211 Pfam PF00072 Response regulator receiver domain 6 117 3.6E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_2408 9fba8490794abe273c80ab6573a9a635 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 200 6.9E-21 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_2218 f935e551bc853e1800dec7c625cb8b90 454 Gene3D G3DSA:3.20.20.70 9 256 2.0E-182 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_2218 f935e551bc853e1800dec7c625cb8b90 454 SUPERFAMILY SSF51366 258 451 2.51E-59 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XDD1_2218 f935e551bc853e1800dec7c625cb8b90 454 Gene3D G3DSA:3.20.20.70 257 447 2.0E-182 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_2218 f935e551bc853e1800dec7c625cb8b90 454 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 51 69 - T 15-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 XDD1_2218 f935e551bc853e1800dec7c625cb8b90 454 Pfam PF00218 Indole-3-glycerol phosphate synthase 6 253 4.0E-93 T 15-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 XDD1_2218 f935e551bc853e1800dec7c625cb8b90 454 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 258 449 1.3E-57 T 15-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 XDD1_2218 f935e551bc853e1800dec7c625cb8b90 454 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 4 255 34.371 T 15-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 XDD1_2218 f935e551bc853e1800dec7c625cb8b90 454 SUPERFAMILY SSF51366 13 255 1.29E-79 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XDD1_2218 f935e551bc853e1800dec7c625cb8b90 454 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 256 453 30.441 T 15-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 XDD1_2299 358656a49942f79615f5fcec32fb0a3e 356 Pfam PF00700 Bacterial flagellin C-terminal helical region 271 355 1.0E-30 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 XDD1_2299 358656a49942f79615f5fcec32fb0a3e 356 Gene3D G3DSA:3.30.70.3070 164 253 2.5E-55 T 15-10-2018 XDD1_2299 358656a49942f79615f5fcec32fb0a3e 356 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 1.3E-42 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 XDD1_2299 358656a49942f79615f5fcec32fb0a3e 356 Gene3D G3DSA:1.20.58.1830 2 62 5.6E-6 T 15-10-2018 XDD1_2299 358656a49942f79615f5fcec32fb0a3e 356 SUPERFAMILY SSF64518 1 356 1.44E-102 T 15-10-2018 XDD1_2299 358656a49942f79615f5fcec32fb0a3e 356 PRINTS PR00207 Flagellin signature 111 134 3.9E-31 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 XDD1_2299 358656a49942f79615f5fcec32fb0a3e 356 PRINTS PR00207 Flagellin signature 37 54 3.9E-31 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 XDD1_2299 358656a49942f79615f5fcec32fb0a3e 356 PRINTS PR00207 Flagellin signature 76 95 3.9E-31 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 XDD1_2299 358656a49942f79615f5fcec32fb0a3e 356 Gene3D G3DSA:1.20.1330.10 63 301 2.5E-55 T 15-10-2018 XDD1_2299 358656a49942f79615f5fcec32fb0a3e 356 Gene3D G3DSA:1.10.8.410 304 356 7.5E-23 T 15-10-2018 XDD1_3442 b9835597d56597b87fc2a6f93be4a449 343 Pfam PF05125 Phage major capsid protein, P2 family 12 325 1.2E-109 T 15-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid XDD1_3442 b9835597d56597b87fc2a6f93be4a449 343 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 10 323 2.5E-92 T 15-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid XDD1_1454 1dd405114ed41609274ce40502e08c7c 136 Gene3D G3DSA:3.30.420.470 3 134 3.4E-16 T 15-10-2018 XDD1_1454 1dd405114ed41609274ce40502e08c7c 136 SUPERFAMILY SSF53098 38 126 5.56E-5 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_1454 1dd405114ed41609274ce40502e08c7c 136 Pfam PF13358 DDE superfamily endonuclease 3 122 8.6E-28 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0519 39b6651b7916df085ea8bcdfe9faa474 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 15-10-2018 IPR018313 Solute-binding protein family 3, conserved site XDD1_0519 39b6651b7916df085ea8bcdfe9faa474 257 SMART SM00062 35 254 4.8E-68 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XDD1_0519 39b6651b7916df085ea8bcdfe9faa474 257 Gene3D G3DSA:3.40.190.10 36 246 1.8E-68 T 15-10-2018 XDD1_0519 39b6651b7916df085ea8bcdfe9faa474 257 Gene3D G3DSA:3.40.190.10 118 215 1.8E-68 T 15-10-2018 XDD1_0519 39b6651b7916df085ea8bcdfe9faa474 257 SUPERFAMILY SSF53850 1 252 5.28E-66 T 15-10-2018 XDD1_0519 39b6651b7916df085ea8bcdfe9faa474 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 252 7.4E-60 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XDD1_2894 f95d63fb57bc67a3dfcb15ab86649d50 195 Gene3D G3DSA:1.10.10.60 1 68 2.2E-25 T 15-10-2018 XDD1_2894 f95d63fb57bc67a3dfcb15ab86649d50 195 SUPERFAMILY SSF46689 2 78 1.44E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2894 f95d63fb57bc67a3dfcb15ab86649d50 195 Gene3D G3DSA:1.10.357.10 70 194 4.0E-25 T 15-10-2018 XDD1_2894 f95d63fb57bc67a3dfcb15ab86649d50 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 55 4.0E-8 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_2894 f95d63fb57bc67a3dfcb15ab86649d50 195 SUPERFAMILY SSF48498 82 193 1.19E-20 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily XDD1_3928 00974d42222d7fc625776b109a581365 442 PIRSF PIRSF006444 7 441 7.6E-198 T 15-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 XDD1_3928 00974d42222d7fc625776b109a581365 442 Gene3D G3DSA:3.30.300.30 336 440 3.6E-31 T 15-10-2018 XDD1_3928 00974d42222d7fc625776b109a581365 442 Pfam PF00501 AMP-binding enzyme 90 297 4.9E-14 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_3928 00974d42222d7fc625776b109a581365 442 SUPERFAMILY SSF56801 29 402 2.88E-60 T 15-10-2018 XDD1_3928 00974d42222d7fc625776b109a581365 442 Pfam PF14535 AMP-binding enzyme C-terminal domain 344 439 6.9E-27 T 15-10-2018 IPR028154 AMP-dependent ligase, C-terminal XDD1_3928 00974d42222d7fc625776b109a581365 442 Gene3D G3DSA:3.40.50.12780 6 335 1.3E-129 T 15-10-2018 XDD1_3928 00974d42222d7fc625776b109a581365 442 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 19 439 2.8E-208 T 15-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 XDD1_3268 2e57740d67d0c2b4908f07e625ff3c92 244 Pfam PF01081 KDPG and KHG aldolase 35 229 2.5E-88 T 15-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 XDD1_3268 2e57740d67d0c2b4908f07e625ff3c92 244 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 35 234 3.3E-84 T 15-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 XDD1_3268 2e57740d67d0c2b4908f07e625ff3c92 244 SUPERFAMILY SSF51569 29 235 8.24E-70 T 15-10-2018 XDD1_3268 2e57740d67d0c2b4908f07e625ff3c92 244 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 154 167 - T 15-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 XDD1_3268 2e57740d67d0c2b4908f07e625ff3c92 244 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 66 75 - T 15-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 XDD1_3268 2e57740d67d0c2b4908f07e625ff3c92 244 Gene3D G3DSA:3.20.20.70 21 238 4.2E-75 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_3629 6c6d28297f8e9d3d157c6ed834143e22 904 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 892 1.4E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_3629 6c6d28297f8e9d3d157c6ed834143e22 904 SMART SM00421 836 893 4.9E-21 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_3629 6c6d28297f8e9d3d157c6ed834143e22 904 SUPERFAMILY SSF46894 831 895 7.14E-17 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XDD1_3629 6c6d28297f8e9d3d157c6ed834143e22 904 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.9E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_3629 6c6d28297f8e9d3d157c6ed834143e22 904 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.9E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_3629 6c6d28297f8e9d3d157c6ed834143e22 904 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.9E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_3629 6c6d28297f8e9d3d157c6ed834143e22 904 Gene3D G3DSA:3.40.50.300 10 162 5.7E-7 T 15-10-2018 XDD1_3629 6c6d28297f8e9d3d157c6ed834143e22 904 Gene3D G3DSA:1.25.40.10 443 811 3.6E-83 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_3629 6c6d28297f8e9d3d157c6ed834143e22 904 SUPERFAMILY SSF52540 8 230 1.07E-9 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3629 6c6d28297f8e9d3d157c6ed834143e22 904 Gene3D G3DSA:1.10.10.10 829 900 1.3E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3629 6c6d28297f8e9d3d157c6ed834143e22 904 SUPERFAMILY SSF48452 444 806 2.6E-145 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_3629 6c6d28297f8e9d3d157c6ed834143e22 904 Pfam PF13181 Tetratricopeptide repeat 740 763 0.11 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XDD1_3629 6c6d28297f8e9d3d157c6ed834143e22 904 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_0489 ad44fe0b9e10a48a4471e5394cf00ee0 1031 Gene3D G3DSA:2.60.40.10 560 662 3.2E-17 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_0489 ad44fe0b9e10a48a4471e5394cf00ee0 1031 Gene3D G3DSA:3.10.350.10 52 116 8.7E-8 T 15-10-2018 IPR036779 LysM domain superfamily XDD1_0489 ad44fe0b9e10a48a4471e5394cf00ee0 1031 SUPERFAMILY SSF49373 563 657 9.94E-13 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments XDD1_0489 ad44fe0b9e10a48a4471e5394cf00ee0 1031 Pfam PF09134 Invasin, domain 3 562 657 8.6E-16 T 15-10-2018 IPR015217 Invasin, domain 3 XDD1_0489 ad44fe0b9e10a48a4471e5394cf00ee0 1031 SMART SM00257 61 109 2.9E-7 T 15-10-2018 IPR018392 LysM domain XDD1_0489 ad44fe0b9e10a48a4471e5394cf00ee0 1031 Gene3D G3DSA:2.40.160.160 217 461 1.8E-103 T 15-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily XDD1_0489 ad44fe0b9e10a48a4471e5394cf00ee0 1031 SUPERFAMILY SSF54106 61 109 3.66E-5 T 15-10-2018 XDD1_0489 ad44fe0b9e10a48a4471e5394cf00ee0 1031 Pfam PF11924 Inverse autotransporter, beta-domain 182 454 5.8E-108 T 15-10-2018 IPR024519 Inverse autotransporter, beta-domain XDD1_0489 ad44fe0b9e10a48a4471e5394cf00ee0 1031 Pfam PF01476 LysM domain 62 109 1.8E-6 T 15-10-2018 IPR018392 LysM domain XDD1_0489 ad44fe0b9e10a48a4471e5394cf00ee0 1031 PRINTS PR01369 Intimin signature 334 353 1.3E-12 T 15-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 XDD1_0489 ad44fe0b9e10a48a4471e5394cf00ee0 1031 PRINTS PR01369 Intimin signature 306 321 1.3E-12 T 15-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 XDD1_0489 ad44fe0b9e10a48a4471e5394cf00ee0 1031 PRINTS PR01369 Intimin signature 402 421 1.3E-12 T 15-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 XDD1_0489 ad44fe0b9e10a48a4471e5394cf00ee0 1031 PRINTS PR01369 Intimin signature 489 501 1.3E-12 T 15-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 XDD1_0489 ad44fe0b9e10a48a4471e5394cf00ee0 1031 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 851 1029 1.2E-51 T 15-10-2018 IPR008541 Protein of unknown function DUF823 XDD1_1438 89c2c4d664e481235d43c29193880f98 222 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 15-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XDD1_1438 89c2c4d664e481235d43c29193880f98 222 SUPERFAMILY SSF55620 7 217 1.11E-75 T 15-10-2018 XDD1_1438 89c2c4d664e481235d43c29193880f98 222 Gene3D G3DSA:3.30.1130.10 85 218 2.8E-54 T 15-10-2018 XDD1_1438 89c2c4d664e481235d43c29193880f98 222 Gene3D G3DSA:1.10.286.10 1 84 2.9E-37 T 15-10-2018 XDD1_1438 89c2c4d664e481235d43c29193880f98 222 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 217 4.2E-85 T 15-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XDD1_1438 89c2c4d664e481235d43c29193880f98 222 Pfam PF01227 GTP cyclohydrolase I 38 216 1.4E-64 T 15-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XDD1_1438 89c2c4d664e481235d43c29193880f98 222 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 34.248 T 15-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XDD1_1438 89c2c4d664e481235d43c29193880f98 222 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 15-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XDD1_2236 e2790cb730b3257fd080acdb58f84dfc 887 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 XDD1_2236 e2790cb730b3257fd080acdb58f84dfc 887 Gene3D G3DSA:3.40.50.1970 450 643 4.7E-55 T 15-10-2018 XDD1_2236 e2790cb730b3257fd080acdb58f84dfc 887 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 XDD1_2236 e2790cb730b3257fd080acdb58f84dfc 887 Gene3D G3DSA:3.40.605.10 10 444 3.7E-184 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 XDD1_2236 e2790cb730b3257fd080acdb58f84dfc 887 SUPERFAMILY SSF56796 449 867 4.84E-117 T 15-10-2018 XDD1_2236 e2790cb730b3257fd080acdb58f84dfc 887 SUPERFAMILY SSF53720 6 453 6.41E-87 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XDD1_2236 e2790cb730b3257fd080acdb58f84dfc 887 Gene3D G3DSA:1.20.1090.10 645 865 1.8E-60 T 15-10-2018 XDD1_2236 e2790cb730b3257fd080acdb58f84dfc 887 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 5.0E-112 T 15-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 XDD1_2236 e2790cb730b3257fd080acdb58f84dfc 887 Pfam PF00171 Aldehyde dehydrogenase family 5 400 1.5E-30 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 XDD1_2236 e2790cb730b3257fd080acdb58f84dfc 887 PIRSF PIRSF000111 1 866 0.0 T 15-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 XDD1_2236 e2790cb730b3257fd080acdb58f84dfc 887 Gene3D G3DSA:3.40.309.10 218 404 3.7E-184 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 XDD1_1441 3da8f3cd9415766f1e5bdd4370a2234d 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 1.5E-78 T 15-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 XDD1_1441 3da8f3cd9415766f1e5bdd4370a2234d 565 SUPERFAMILY SSF53223 7 270 7.91E-111 T 15-10-2018 XDD1_1441 3da8f3cd9415766f1e5bdd4370a2234d 565 SMART SM01274 81 261 6.6E-107 T 15-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 XDD1_1441 3da8f3cd9415766f1e5bdd4370a2234d 565 SUPERFAMILY SSF51735 271 562 2.85E-94 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1441 3da8f3cd9415766f1e5bdd4370a2234d 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 2.2E-104 T 15-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 XDD1_1441 3da8f3cd9415766f1e5bdd4370a2234d 565 SMART SM00919 271 531 1.1E-133 T 15-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 XDD1_1441 3da8f3cd9415766f1e5bdd4370a2234d 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 15-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 XDD1_1441 3da8f3cd9415766f1e5bdd4370a2234d 565 Gene3D G3DSA:3.40.50.10380 18 268 8.3E-116 T 15-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 XDD1_1441 3da8f3cd9415766f1e5bdd4370a2234d 565 PIRSF PIRSF000106 2 563 1.6E-228 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 XDD1_1441 3da8f3cd9415766f1e5bdd4370a2234d 565 Gene3D G3DSA:3.40.50.720 269 565 1.2E-109 T 15-10-2018 XDD1_1441 3da8f3cd9415766f1e5bdd4370a2234d 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 71.926 T 15-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 XDD1_1441 3da8f3cd9415766f1e5bdd4370a2234d 565 PRINTS PR00072 Malic enzyme signature 267 283 4.2E-72 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 XDD1_1441 3da8f3cd9415766f1e5bdd4370a2234d 565 PRINTS PR00072 Malic enzyme signature 87 111 4.2E-72 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 XDD1_1441 3da8f3cd9415766f1e5bdd4370a2234d 565 PRINTS PR00072 Malic enzyme signature 408 424 4.2E-72 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 XDD1_1441 3da8f3cd9415766f1e5bdd4370a2234d 565 PRINTS PR00072 Malic enzyme signature 242 260 4.2E-72 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 XDD1_1441 3da8f3cd9415766f1e5bdd4370a2234d 565 PRINTS PR00072 Malic enzyme signature 147 176 4.2E-72 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 XDD1_1441 3da8f3cd9415766f1e5bdd4370a2234d 565 PRINTS PR00072 Malic enzyme signature 183 205 4.2E-72 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 XDD1_1441 3da8f3cd9415766f1e5bdd4370a2234d 565 PRINTS PR00072 Malic enzyme signature 298 314 4.2E-72 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 XDD1_2360 dd47142b600caceaef5af0b627f0f601 260 Pfam PF13503 Domain of unknown function (DUF4123) 19 141 4.4E-22 T 15-10-2018 IPR025391 Domain of unknown function DUF4123 XDD1_3242 59e2e990d0beefea4a976cf5cd193a69 382 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 5 377 7.8E-90 T 15-10-2018 IPR024455 Phage capsid XDD1_3242 59e2e990d0beefea4a976cf5cd193a69 382 Pfam PF05065 Phage capsid family 102 377 1.5E-59 T 15-10-2018 IPR024455 Phage capsid XDD1_3242 59e2e990d0beefea4a976cf5cd193a69 382 SUPERFAMILY SSF56563 94 380 1.1E-58 T 15-10-2018 XDD1_3242 59e2e990d0beefea4a976cf5cd193a69 382 Gene3D G3DSA:3.30.2400.10 139 339 6.5E-13 T 15-10-2018 XDD1_3242 59e2e990d0beefea4a976cf5cd193a69 382 Gene3D G3DSA:3.30.2320.10 238 332 6.5E-13 T 15-10-2018 XDD1_0753 dceee77e21a0a6014158866c1f74ccd5 937 Gene3D G3DSA:1.10.730.20 640 929 6.4E-94 T 15-10-2018 XDD1_0753 dceee77e21a0a6014158866c1f74ccd5 937 Pfam PF06827 Zinc finger found in FPG and IleRS 897 925 2.0E-8 T 15-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 XDD1_0753 dceee77e21a0a6014158866c1f74ccd5 937 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 928 21.328 T 15-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 XDD1_0753 dceee77e21a0a6014158866c1f74ccd5 937 SUPERFAMILY SSF50677 204 403 3.56E-50 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XDD1_0753 dceee77e21a0a6014158866c1f74ccd5 937 SUPERFAMILY SSF47323 652 928 2.06E-76 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_0753 dceee77e21a0a6014158866c1f74ccd5 937 SUPERFAMILY SSF52374 3 647 1.8E-137 T 15-10-2018 XDD1_0753 dceee77e21a0a6014158866c1f74ccd5 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 3.7E-31 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 XDD1_0753 dceee77e21a0a6014158866c1f74ccd5 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 3.7E-31 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 XDD1_0753 dceee77e21a0a6014158866c1f74ccd5 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 3.7E-31 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 XDD1_0753 dceee77e21a0a6014158866c1f74ccd5 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 3.7E-31 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 XDD1_0753 dceee77e21a0a6014158866c1f74ccd5 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 3.7E-31 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 XDD1_0753 dceee77e21a0a6014158866c1f74ccd5 937 Gene3D G3DSA:3.40.50.620 25 629 1.4E-231 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_0753 dceee77e21a0a6014158866c1f74ccd5 937 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_0753 dceee77e21a0a6014158866c1f74ccd5 937 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 640 8.2E-218 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_0753 dceee77e21a0a6014158866c1f74ccd5 937 Gene3D G3DSA:3.90.740.10 195 408 1.4E-231 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XDD1_0753 dceee77e21a0a6014158866c1f74ccd5 937 Pfam PF08264 Anticodon-binding domain of tRNA 685 840 1.2E-27 T 15-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 XDD1_0753 dceee77e21a0a6014158866c1f74ccd5 937 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 3.5E-296 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 XDD1_2354 951321356018f5fbd432e688359654fc 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 439 7.3E-150 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 XDD1_2354 951321356018f5fbd432e688359654fc 458 Gene3D G3DSA:1.20.1740.10 59 449 5.8E-7 T 15-10-2018 XDD1_2354 951321356018f5fbd432e688359654fc 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 91 106 - T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 XDD1_2354 951321356018f5fbd432e688359654fc 458 Pfam PF01235 Sodium:alanine symporter family 53 447 4.6E-144 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 XDD1_2354 951321356018f5fbd432e688359654fc 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 3.5E-50 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 XDD1_2354 951321356018f5fbd432e688359654fc 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 3.5E-50 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 XDD1_2354 951321356018f5fbd432e688359654fc 458 PRINTS PR00175 Sodium/alanine symporter signature 350 372 3.5E-50 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 XDD1_2354 951321356018f5fbd432e688359654fc 458 PRINTS PR00175 Sodium/alanine symporter signature 91 113 3.5E-50 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 XDD1_2354 951321356018f5fbd432e688359654fc 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 3.5E-50 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 XDD1_2354 951321356018f5fbd432e688359654fc 458 PRINTS PR00175 Sodium/alanine symporter signature 409 429 3.5E-50 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 XDD1_3129 250daa0f8b2be3d6e68ee2bcd5d48b3b 433 PIRSF PIRSF001400 1 431 2.2E-192 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XDD1_3129 250daa0f8b2be3d6e68ee2bcd5d48b3b 433 Gene3D G3DSA:3.30.390.10 3 127 2.9E-54 T 15-10-2018 IPR029017 Enolase-like, N-terminal XDD1_3129 250daa0f8b2be3d6e68ee2bcd5d48b3b 433 SUPERFAMILY SSF51604 143 428 7.07E-126 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily XDD1_3129 250daa0f8b2be3d6e68ee2bcd5d48b3b 433 Hamap MF_00318 Enolase [eno]. 2 417 44.161 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XDD1_3129 250daa0f8b2be3d6e68ee2bcd5d48b3b 433 SMART SM01192 143 431 1.4E-211 T 15-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XDD1_3129 250daa0f8b2be3d6e68ee2bcd5d48b3b 433 SUPERFAMILY SSF54826 3 138 7.07E-56 T 15-10-2018 XDD1_3129 250daa0f8b2be3d6e68ee2bcd5d48b3b 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 2.4E-138 T 15-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XDD1_3129 250daa0f8b2be3d6e68ee2bcd5d48b3b 433 Pfam PF03952 Enolase, N-terminal domain 4 134 1.7E-57 T 15-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XDD1_3129 250daa0f8b2be3d6e68ee2bcd5d48b3b 433 SMART SM01193 4 134 3.9E-91 T 15-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XDD1_3129 250daa0f8b2be3d6e68ee2bcd5d48b3b 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 15-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_3129 250daa0f8b2be3d6e68ee2bcd5d48b3b 433 Gene3D G3DSA:3.20.20.120 128 433 3.1E-133 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily XDD1_3129 250daa0f8b2be3d6e68ee2bcd5d48b3b 433 PRINTS PR00148 Enolase signature 369 386 4.3E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XDD1_3129 250daa0f8b2be3d6e68ee2bcd5d48b3b 433 PRINTS PR00148 Enolase signature 317 328 4.3E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XDD1_3129 250daa0f8b2be3d6e68ee2bcd5d48b3b 433 PRINTS PR00148 Enolase signature 340 354 4.3E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XDD1_3129 250daa0f8b2be3d6e68ee2bcd5d48b3b 433 PRINTS PR00148 Enolase signature 37 51 4.3E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XDD1_3129 250daa0f8b2be3d6e68ee2bcd5d48b3b 433 PRINTS PR00148 Enolase signature 107 123 4.3E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XDD1_3129 250daa0f8b2be3d6e68ee2bcd5d48b3b 433 PRINTS PR00148 Enolase signature 165 178 4.3E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XDD1_3129 250daa0f8b2be3d6e68ee2bcd5d48b3b 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 4.8E-208 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XDD1_0184 2bfb2c15da7a7a6533c828e4cb462cd1 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 15-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0184 2bfb2c15da7a7a6533c828e4cb462cd1 255 Gene3D G3DSA:3.20.20.70 1 255 1.1E-103 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_0184 2bfb2c15da7a7a6533c828e4cb462cd1 255 SUPERFAMILY SSF51351 1 250 4.84E-92 T 15-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0184 2bfb2c15da7a7a6533c828e4cb462cd1 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 62.27 T 15-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0184 2bfb2c15da7a7a6533c828e4cb462cd1 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 6.0E-97 T 15-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0184 2bfb2c15da7a7a6533c828e4cb462cd1 255 Pfam PF00121 Triosephosphate isomerase 5 246 4.8E-93 T 15-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_2772 735746949a21e494d08819f88c54cf5c 139 Gene3D G3DSA:1.25.40.10 32 136 2.4E-14 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_2772 735746949a21e494d08819f88c54cf5c 139 SMART SM00028 33 66 1.3 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XDD1_2772 735746949a21e494d08819f88c54cf5c 139 SMART SM00028 67 100 32.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XDD1_2772 735746949a21e494d08819f88c54cf5c 139 SUPERFAMILY SSF48452 33 125 7.11E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_3492 6376085dc5d27173d5307a748f37cae6 127 Pfam PF02021 Uncharacterised protein family UPF0102 16 107 2.3E-22 T 15-10-2018 IPR003509 Uncharacterised protein family UPF0102 XDD1_3492 6376085dc5d27173d5307a748f37cae6 127 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 10 120 8.7E-39 T 15-10-2018 IPR003509 Uncharacterised protein family UPF0102 XDD1_3492 6376085dc5d27173d5307a748f37cae6 127 Gene3D G3DSA:3.40.1350.10 15 124 2.1E-28 T 15-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 XDD1_3492 6376085dc5d27173d5307a748f37cae6 127 SUPERFAMILY SSF52980 9 121 9.92E-19 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 XDD1_3492 6376085dc5d27173d5307a748f37cae6 127 Hamap MF_00048 UPF0102 protein YraN [yraN]. 8 120 21.342 T 15-10-2018 IPR003509 Uncharacterised protein family UPF0102 XDD1_0937 482ef79740a04ac62765401b94d8cd95 365 Gene3D G3DSA:3.30.470.20 160 365 9.2E-78 T 15-10-2018 XDD1_0937 482ef79740a04ac62765401b94d8cd95 365 SUPERFAMILY SSF56059 79 284 8.93E-55 T 15-10-2018 XDD1_0937 482ef79740a04ac62765401b94d8cd95 365 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 335 32.565 T 15-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 XDD1_0937 482ef79740a04ac62765401b94d8cd95 365 SUPERFAMILY SSF51246 288 363 1.96E-19 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 XDD1_0937 482ef79740a04ac62765401b94d8cd95 365 Gene3D G3DSA:3.30.1490.20 94 159 3.2E-18 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XDD1_0937 482ef79740a04ac62765401b94d8cd95 365 Pfam PF02222 ATP-grasp domain 88 264 1.4E-51 T 15-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type XDD1_0937 482ef79740a04ac62765401b94d8cd95 365 SUPERFAMILY SSF52440 2 74 4.32E-15 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XDD1_0937 482ef79740a04ac62765401b94d8cd95 365 Gene3D G3DSA:3.40.50.20 1 70 8.4E-31 T 15-10-2018 XDD1_0937 482ef79740a04ac62765401b94d8cd95 365 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 339 6.1E-107 T 15-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 XDD1_2052 2e1eca2db9740fc7fcbaf9b7b9a3278d 512 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 20.141 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XDD1_2052 2e1eca2db9740fc7fcbaf9b7b9a3278d 512 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 505 3.5E-166 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XDD1_2052 2e1eca2db9740fc7fcbaf9b7b9a3278d 512 PIRSF PIRSF002869 1 512 1.0E-173 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XDD1_2052 2e1eca2db9740fc7fcbaf9b7b9a3278d 512 Pfam PF03023 MviN-like protein 28 478 1.1E-152 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XDD1_2052 2e1eca2db9740fc7fcbaf9b7b9a3278d 512 PRINTS PR01806 Virulence factor MviN signature 33 52 7.7E-84 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XDD1_2052 2e1eca2db9740fc7fcbaf9b7b9a3278d 512 PRINTS PR01806 Virulence factor MviN signature 357 376 7.7E-84 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XDD1_2052 2e1eca2db9740fc7fcbaf9b7b9a3278d 512 PRINTS PR01806 Virulence factor MviN signature 409 426 7.7E-84 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XDD1_2052 2e1eca2db9740fc7fcbaf9b7b9a3278d 512 PRINTS PR01806 Virulence factor MviN signature 133 157 7.7E-84 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XDD1_2052 2e1eca2db9740fc7fcbaf9b7b9a3278d 512 PRINTS PR01806 Virulence factor MviN signature 157 178 7.7E-84 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XDD1_2052 2e1eca2db9740fc7fcbaf9b7b9a3278d 512 PRINTS PR01806 Virulence factor MviN signature 52 68 7.7E-84 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XDD1_2052 2e1eca2db9740fc7fcbaf9b7b9a3278d 512 PRINTS PR01806 Virulence factor MviN signature 259 285 7.7E-84 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XDD1_0100 bacf5efab7e8de88694dd9857415cd3d 394 SUPERFAMILY SSF52954 295 373 5.29E-17 T 15-10-2018 XDD1_0100 bacf5efab7e8de88694dd9857415cd3d 394 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 82 289 2.1E-37 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_0100 bacf5efab7e8de88694dd9857415cd3d 394 PRINTS PR01047 Threonyl-tRNA synthetase signature 124 147 1.5E-47 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XDD1_0100 bacf5efab7e8de88694dd9857415cd3d 394 PRINTS PR01047 Threonyl-tRNA synthetase signature 91 119 1.5E-47 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XDD1_0100 bacf5efab7e8de88694dd9857415cd3d 394 PRINTS PR01047 Threonyl-tRNA synthetase signature 226 254 1.5E-47 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XDD1_0100 bacf5efab7e8de88694dd9857415cd3d 394 PRINTS PR01047 Threonyl-tRNA synthetase signature 296 308 1.5E-47 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XDD1_0100 bacf5efab7e8de88694dd9857415cd3d 394 PRINTS PR01047 Threonyl-tRNA synthetase signature 269 282 1.5E-47 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XDD1_0100 bacf5efab7e8de88694dd9857415cd3d 394 Pfam PF03129 Anticodon binding domain 304 373 7.0E-11 T 15-10-2018 IPR004154 Anticodon-binding XDD1_0100 bacf5efab7e8de88694dd9857415cd3d 394 Gene3D G3DSA:3.30.930.10 1 291 5.5E-107 T 15-10-2018 XDD1_0100 bacf5efab7e8de88694dd9857415cd3d 394 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 2 386 9.0E-129 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XDD1_0100 bacf5efab7e8de88694dd9857415cd3d 394 SUPERFAMILY SSF55681 4 288 7.19E-86 T 15-10-2018 XDD1_0100 bacf5efab7e8de88694dd9857415cd3d 394 Gene3D G3DSA:3.40.50.800 293 393 2.3E-15 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily XDD1_0877 cf278efb30f81dbd02c190078e29c69c 423 SMART SM00382 111 333 4.1E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0877 cf278efb30f81dbd02c190078e29c69c 423 SMART SM00994 12 51 1.0E-24 T 15-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 XDD1_0877 cf278efb30f81dbd02c190078e29c69c 423 Gene3D G3DSA:3.40.50.300 62 315 7.2E-109 T 15-10-2018 XDD1_0877 cf278efb30f81dbd02c190078e29c69c 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.471 T 15-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 XDD1_0877 cf278efb30f81dbd02c190078e29c69c 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 7.7E-214 T 15-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 XDD1_0877 cf278efb30f81dbd02c190078e29c69c 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 394 1.4E-16 T 15-10-2018 IPR019489 Clp ATPase, C-terminal XDD1_0877 cf278efb30f81dbd02c190078e29c69c 423 SUPERFAMILY SSF52540 63 404 1.49E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0877 cf278efb30f81dbd02c190078e29c69c 423 SUPERFAMILY SSF57716 13 48 5.84E-12 T 15-10-2018 XDD1_0877 cf278efb30f81dbd02c190078e29c69c 423 Pfam PF06689 ClpX C4-type zinc finger 13 50 1.2E-20 T 15-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 XDD1_0877 cf278efb30f81dbd02c190078e29c69c 423 SMART SM01086 317 412 1.0E-34 T 15-10-2018 IPR019489 Clp ATPase, C-terminal XDD1_0877 cf278efb30f81dbd02c190078e29c69c 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 9.0E-49 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_0877 cf278efb30f81dbd02c190078e29c69c 423 Gene3D G3DSA:3.30.50.30 2 52 9.3E-28 T 15-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily XDD1_0877 cf278efb30f81dbd02c190078e29c69c 423 Gene3D G3DSA:1.10.8.60 316 423 1.4E-41 T 15-10-2018 XDD1_3285 4d916a3b3eb07a976f949422108d016b 227 Pfam PF04170 NlpE N-terminal domain 43 128 3.9E-26 T 15-10-2018 IPR007298 Copper resistance lipoprotein NlpE XDD1_3285 4d916a3b3eb07a976f949422108d016b 227 Gene3D G3DSA:2.40.128.300 21 116 3.2E-27 T 15-10-2018 XDD1_3285 4d916a3b3eb07a976f949422108d016b 227 Pfam PF17185 NlpE C-terminal OB domain 136 224 3.0E-33 T 15-10-2018 IPR033450 NlpE, C-terminal OB domain XDD1_3285 4d916a3b3eb07a976f949422108d016b 227 Gene3D G3DSA:2.40.50.540 137 225 4.7E-25 T 15-10-2018 IPR038139 NlpE, C-terminal domain superfamily XDD1_3324 60a2bde01eb65ccde1a09bcb06848a96 457 Gene3D G3DSA:1.20.1600.10 29 457 1.1E-89 T 15-10-2018 XDD1_3324 60a2bde01eb65ccde1a09bcb06848a96 457 SUPERFAMILY SSF56954 28 455 4.71E-80 T 15-10-2018 XDD1_3324 60a2bde01eb65ccde1a09bcb06848a96 457 Pfam PF02321 Outer membrane efflux protein 30 228 4.6E-19 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 XDD1_3324 60a2bde01eb65ccde1a09bcb06848a96 457 Pfam PF02321 Outer membrane efflux protein 258 438 1.4E-26 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 XDD1_3324 60a2bde01eb65ccde1a09bcb06848a96 457 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 27 452 1.7E-100 T 15-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 XDD1_1491 6911331fd00f68b56868fd957d9eb94d 1552 Pfam PF05488 PAAR motif 205 267 2.0E-19 T 15-10-2018 IPR008727 PAAR motif XDD1_1491 6911331fd00f68b56868fd957d9eb94d 1552 Gene3D G3DSA:2.180.10.10 1113 1409 8.6E-39 T 15-10-2018 XDD1_1491 6911331fd00f68b56868fd957d9eb94d 1552 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1328 1409 6.5E-24 T 15-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 XDD1_1491 6911331fd00f68b56868fd957d9eb94d 1552 Gene3D G3DSA:2.60.200.60 197 276 2.0E-17 T 15-10-2018 XDD1_1491 6911331fd00f68b56868fd957d9eb94d 1552 Gene3D G3DSA:3.90.930.1 844 978 2.3E-5 T 15-10-2018 XDD1_1491 6911331fd00f68b56868fd957d9eb94d 1552 Gene3D G3DSA:3.90.930.1 734 843 4.5E-5 T 15-10-2018 XDD1_1491 6911331fd00f68b56868fd957d9eb94d 1552 Gene3D G3DSA:3.90.930.1 537 666 1.1E-7 T 15-10-2018 XDD1_1491 6911331fd00f68b56868fd957d9eb94d 1552 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 735 773 0.0012 T 15-10-2018 IPR006530 YD repeat XDD1_1491 6911331fd00f68b56868fd957d9eb94d 1552 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 545 580 7.0E-4 T 15-10-2018 IPR006530 YD repeat XDD1_1491 6911331fd00f68b56868fd957d9eb94d 1552 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1189 1219 1.5E-4 T 15-10-2018 IPR006530 YD repeat XDD1_1491 6911331fd00f68b56868fd957d9eb94d 1552 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 935 971 1.1E-4 T 15-10-2018 IPR006530 YD repeat XDD1_1491 6911331fd00f68b56868fd957d9eb94d 1552 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 843 881 8.2E-4 T 15-10-2018 IPR006530 YD repeat XDD1_1491 6911331fd00f68b56868fd957d9eb94d 1552 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 588 626 2.5E-5 T 15-10-2018 IPR006530 YD repeat XDD1_1491 6911331fd00f68b56868fd957d9eb94d 1552 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 801 840 7.1E-7 T 15-10-2018 IPR006530 YD repeat XDD1_1491 6911331fd00f68b56868fd957d9eb94d 1552 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 692 732 3.2E-5 T 15-10-2018 IPR006530 YD repeat XDD1_1491 6911331fd00f68b56868fd957d9eb94d 1552 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 865 900 4.0E-5 T 15-10-2018 IPR006530 YD repeat XDD1_1491 6911331fd00f68b56868fd957d9eb94d 1552 Pfam PF05593 RHS Repeat 671 707 1.7E-5 T 15-10-2018 IPR031325 RHS repeat XDD1_1491 6911331fd00f68b56868fd957d9eb94d 1552 Pfam PF05593 RHS Repeat 806 838 3.2E-6 T 15-10-2018 IPR031325 RHS repeat XDD1_1491 6911331fd00f68b56868fd957d9eb94d 1552 Pfam PF05593 RHS Repeat 865 899 1.1E-4 T 15-10-2018 IPR031325 RHS repeat XDD1_3350 df36de7b700b3900c58ce9f32698fb32 401 SUPERFAMILY SSF53383 5 393 7.26E-104 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_3350 df36de7b700b3900c58ce9f32698fb32 401 Gene3D G3DSA:3.90.1150.10 22 389 1.8E-140 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_3350 df36de7b700b3900c58ce9f32698fb32 401 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 400 1.2E-209 T 15-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 XDD1_3350 df36de7b700b3900c58ce9f32698fb32 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 15-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site XDD1_3350 df36de7b700b3900c58ce9f32698fb32 401 Gene3D G3DSA:3.40.640.10 34 292 1.8E-140 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_3350 df36de7b700b3900c58ce9f32698fb32 401 Pfam PF00266 Aminotransferase class-V 22 388 1.3E-130 T 15-10-2018 IPR000192 Aminotransferase class V domain XDD1_1717 8cbcf22029fe7a5b88624204723f93ca 313 PIRSF PIRSF026649 2 306 1.8E-95 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 XDD1_1717 8cbcf22029fe7a5b88624204723f93ca 313 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 6 306 6.8E-143 T 15-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 XDD1_1717 8cbcf22029fe7a5b88624204723f93ca 313 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 297 6.2E-101 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 XDD1_1717 8cbcf22029fe7a5b88624204723f93ca 313 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 52.694 T 15-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 XDD1_3623 eda80f8bb81d6b34d430e424aadf1b55 333 Gene3D G3DSA:3.30.420.470 141 321 3.6E-12 T 15-10-2018 XDD1_3623 eda80f8bb81d6b34d430e424aadf1b55 333 SUPERFAMILY SSF46689 8 126 3.4E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3623 eda80f8bb81d6b34d430e424aadf1b55 333 Pfam PF13358 DDE superfamily endonuclease 163 296 9.2E-28 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_3623 eda80f8bb81d6b34d430e424aadf1b55 333 Pfam PF13592 Winged helix-turn helix 94 142 9.8E-7 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_3623 eda80f8bb81d6b34d430e424aadf1b55 333 Pfam PF13384 Homeodomain-like domain 12 59 3.8E-10 T 15-10-2018 XDD1_2134 eda80f8bb81d6b34d430e424aadf1b55 333 Gene3D G3DSA:3.30.420.470 141 321 3.6E-12 T 15-10-2018 XDD1_2134 eda80f8bb81d6b34d430e424aadf1b55 333 SUPERFAMILY SSF46689 8 126 3.4E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2134 eda80f8bb81d6b34d430e424aadf1b55 333 Pfam PF13358 DDE superfamily endonuclease 163 296 9.2E-28 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2134 eda80f8bb81d6b34d430e424aadf1b55 333 Pfam PF13592 Winged helix-turn helix 94 142 9.8E-7 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_2134 eda80f8bb81d6b34d430e424aadf1b55 333 Pfam PF13384 Homeodomain-like domain 12 59 3.8E-10 T 15-10-2018 XDD1_2349 eda80f8bb81d6b34d430e424aadf1b55 333 Gene3D G3DSA:3.30.420.470 141 321 3.6E-12 T 15-10-2018 XDD1_2349 eda80f8bb81d6b34d430e424aadf1b55 333 SUPERFAMILY SSF46689 8 126 3.4E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2349 eda80f8bb81d6b34d430e424aadf1b55 333 Pfam PF13358 DDE superfamily endonuclease 163 296 9.2E-28 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2349 eda80f8bb81d6b34d430e424aadf1b55 333 Pfam PF13592 Winged helix-turn helix 94 142 9.8E-7 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_2349 eda80f8bb81d6b34d430e424aadf1b55 333 Pfam PF13384 Homeodomain-like domain 12 59 3.8E-10 T 15-10-2018 XDD1_1937 eda80f8bb81d6b34d430e424aadf1b55 333 Gene3D G3DSA:3.30.420.470 141 321 3.6E-12 T 15-10-2018 XDD1_1937 eda80f8bb81d6b34d430e424aadf1b55 333 SUPERFAMILY SSF46689 8 126 3.4E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1937 eda80f8bb81d6b34d430e424aadf1b55 333 Pfam PF13358 DDE superfamily endonuclease 163 296 9.2E-28 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_1937 eda80f8bb81d6b34d430e424aadf1b55 333 Pfam PF13592 Winged helix-turn helix 94 142 9.8E-7 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_1937 eda80f8bb81d6b34d430e424aadf1b55 333 Pfam PF13384 Homeodomain-like domain 12 59 3.8E-10 T 15-10-2018 XDD1_1599 43702e6c4e33707fdda101465b11a027 726 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 321 327 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XDD1_1599 43702e6c4e33707fdda101465b11a027 726 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 20 722 32.412 T 15-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 XDD1_1599 43702e6c4e33707fdda101465b11a027 726 Pfam PF01170 Putative RNA methylase family UPF0020 178 390 1.2E-60 T 15-10-2018 IPR000241 Putative RNA methylase domain XDD1_1599 43702e6c4e33707fdda101465b11a027 726 Gene3D G3DSA:3.40.50.150 185 387 3.7E-144 T 15-10-2018 XDD1_1599 43702e6c4e33707fdda101465b11a027 726 Pfam PF02926 THUMP domain 39 169 1.3E-14 T 15-10-2018 IPR004114 THUMP domain GO:0003723 XDD1_1599 43702e6c4e33707fdda101465b11a027 726 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 493 685 2.5E-21 T 15-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 XDD1_1599 43702e6c4e33707fdda101465b11a027 726 SUPERFAMILY SSF53335 416 721 8.23E-68 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_1599 43702e6c4e33707fdda101465b11a027 726 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 211 222 - T 15-10-2018 IPR000241 Putative RNA methylase domain XDD1_1599 43702e6c4e33707fdda101465b11a027 726 SUPERFAMILY SSF53335 160 387 7.12E-36 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_1599 43702e6c4e33707fdda101465b11a027 726 Gene3D G3DSA:3.30.2130.30 21 271 3.7E-144 T 15-10-2018 XDD1_1599 43702e6c4e33707fdda101465b11a027 726 Gene3D G3DSA:3.30.750.80 412 503 1.2E-35 T 15-10-2018 XDD1_1599 43702e6c4e33707fdda101465b11a027 726 PIRSF PIRSF037618 15 723 7.4E-301 T 15-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 XDD1_1599 43702e6c4e33707fdda101465b11a027 726 SMART SM00981 72 170 2.5E-20 T 15-10-2018 IPR004114 THUMP domain GO:0003723 XDD1_1599 43702e6c4e33707fdda101465b11a027 726 Gene3D G3DSA:3.40.50.150 504 722 2.0E-76 T 15-10-2018 XDD1_0286 2493e3c60a58529f9e0eebeaca4b64f4 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.409 T 15-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 XDD1_0286 2493e3c60a58529f9e0eebeaca4b64f4 233 SUPERFAMILY SSF54814 2 106 7.06E-38 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 XDD1_0286 2493e3c60a58529f9e0eebeaca4b64f4 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.7E-41 T 15-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0286 2493e3c60a58529f9e0eebeaca4b64f4 233 Gene3D G3DSA:3.30.1140.32 108 208 3.4E-46 T 15-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0286 2493e3c60a58529f9e0eebeaca4b64f4 233 SUPERFAMILY SSF54821 108 206 7.19E-41 T 15-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0286 2493e3c60a58529f9e0eebeaca4b64f4 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 15-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0286 2493e3c60a58529f9e0eebeaca4b64f4 233 SMART SM00322 60 125 1.9E-7 T 15-10-2018 IPR004087 K Homology domain GO:0003676 XDD1_0286 2493e3c60a58529f9e0eebeaca4b64f4 233 Pfam PF07650 KH domain 38 111 2.1E-18 T 15-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0286 2493e3c60a58529f9e0eebeaca4b64f4 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 1.4E-100 T 15-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 XDD1_0286 2493e3c60a58529f9e0eebeaca4b64f4 233 Gene3D G3DSA:3.30.300.20 17 107 5.1E-30 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta XDD1_1030 03951b89537e08a980cfc5b246223641 255 SUPERFAMILY SSF51735 12 244 2.86E-40 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1030 03951b89537e08a980cfc5b246223641 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 9.4E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_1030 03951b89537e08a980cfc5b246223641 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 9.4E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_1030 03951b89537e08a980cfc5b246223641 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 9.4E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_1030 03951b89537e08a980cfc5b246223641 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 9.4E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_1030 03951b89537e08a980cfc5b246223641 255 Gene3D G3DSA:3.40.50.720 9 252 3.7E-41 T 15-10-2018 XDD1_1030 03951b89537e08a980cfc5b246223641 255 Pfam PF00106 short chain dehydrogenase 15 201 3.5E-31 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3371 cd929c4b2bb1a12f3831ec853dd2bee4 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 2.6E-94 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XDD1_3371 cd929c4b2bb1a12f3831ec853dd2bee4 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 1.6E-41 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XDD1_3371 cd929c4b2bb1a12f3831ec853dd2bee4 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 15-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XDD1_3371 cd929c4b2bb1a12f3831ec853dd2bee4 264 Pfam PF00303 Thymidylate synthase 2 264 1.2E-127 T 15-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XDD1_3371 cd929c4b2bb1a12f3831ec853dd2bee4 264 SUPERFAMILY SSF55831 1 264 5.5E-132 T 15-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XDD1_3371 cd929c4b2bb1a12f3831ec853dd2bee4 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 1.8E-47 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XDD1_3371 cd929c4b2bb1a12f3831ec853dd2bee4 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 1.8E-47 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XDD1_3371 cd929c4b2bb1a12f3831ec853dd2bee4 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 1.8E-47 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XDD1_3371 cd929c4b2bb1a12f3831ec853dd2bee4 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 1.8E-47 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XDD1_3371 cd929c4b2bb1a12f3831ec853dd2bee4 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.8E-47 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XDD1_3371 cd929c4b2bb1a12f3831ec853dd2bee4 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.004 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XDD1_3371 cd929c4b2bb1a12f3831ec853dd2bee4 264 Gene3D G3DSA:3.30.572.10 1 264 3.4E-136 T 15-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XDD1_2660 aace2f6ab5bcd5bf7c4dab1ab1b5e2f5 213 Gene3D G3DSA:1.20.1050.10 90 198 3.7E-84 T 15-10-2018 XDD1_2660 aace2f6ab5bcd5bf7c4dab1ab1b5e2f5 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 135 197 4.1E-13 T 15-10-2018 IPR004046 Glutathione S-transferase, C-terminal XDD1_2660 aace2f6ab5bcd5bf7c4dab1ab1b5e2f5 213 SUPERFAMILY SSF47616 78 207 3.27E-36 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily XDD1_2660 aace2f6ab5bcd5bf7c4dab1ab1b5e2f5 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 81 4.3E-13 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 XDD1_2660 aace2f6ab5bcd5bf7c4dab1ab1b5e2f5 213 SUPERFAMILY SSF52833 1 84 5.38E-22 T 15-10-2018 IPR036249 Thioredoxin-like superfamily XDD1_2660 aace2f6ab5bcd5bf7c4dab1ab1b5e2f5 213 Gene3D G3DSA:3.40.30.10 5 89 3.7E-84 T 15-10-2018 XDD1_1294 9339d07c40676adccdad5f7a6cb0b1ed 397 Gene3D G3DSA:3.30.9.50 86 275 7.3E-104 T 15-10-2018 XDD1_1294 9339d07c40676adccdad5f7a6cb0b1ed 397 Pfam PF01494 FAD binding domain 10 322 5.7E-28 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 XDD1_1294 9339d07c40676adccdad5f7a6cb0b1ed 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 11 33 2.1E-18 T 15-10-2018 XDD1_1294 9339d07c40676adccdad5f7a6cb0b1ed 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 163 178 2.1E-18 T 15-10-2018 XDD1_1294 9339d07c40676adccdad5f7a6cb0b1ed 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 2.1E-18 T 15-10-2018 XDD1_1294 9339d07c40676adccdad5f7a6cb0b1ed 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 2.1E-18 T 15-10-2018 XDD1_1294 9339d07c40676adccdad5f7a6cb0b1ed 397 Gene3D G3DSA:3.50.50.60 11 344 7.3E-104 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1294 9339d07c40676adccdad5f7a6cb0b1ed 397 SUPERFAMILY SSF51905 9 389 1.78E-58 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1294 9339d07c40676adccdad5f7a6cb0b1ed 397 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 11 396 1.0E-122 T 15-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 XDD1_2624 e53d801060eb9e546b40ddea8f4995e4 180 Pfam PF01713 Smr domain 98 171 1.6E-15 T 15-10-2018 IPR002625 Smr domain XDD1_2624 e53d801060eb9e546b40ddea8f4995e4 180 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 40.589 T 15-10-2018 IPR022990 Uncharacterised protein family UPF0115 XDD1_2624 e53d801060eb9e546b40ddea8f4995e4 180 SMART SM00463 95 173 1.8E-17 T 15-10-2018 IPR002625 Smr domain XDD1_2624 e53d801060eb9e546b40ddea8f4995e4 180 SUPERFAMILY SSF160443 96 150 8.89E-9 T 15-10-2018 IPR036063 Smr domain superfamily XDD1_2624 e53d801060eb9e546b40ddea8f4995e4 180 Gene3D G3DSA:3.30.1370.110 49 177 2.4E-26 T 15-10-2018 XDD1_1674 779ef8b9ed2571f45da9e9b18b8c87cb 219 Gene3D G3DSA:3.40.50.12740 2 209 6.7E-59 T 15-10-2018 XDD1_1674 779ef8b9ed2571f45da9e9b18b8c87cb 219 SUPERFAMILY SSF46894 137 210 1.02E-18 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XDD1_1674 779ef8b9ed2571f45da9e9b18b8c87cb 219 SUPERFAMILY SSF52172 3 132 2.42E-33 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_1674 779ef8b9ed2571f45da9e9b18b8c87cb 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 7.0E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_1674 779ef8b9ed2571f45da9e9b18b8c87cb 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 7.0E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_1674 779ef8b9ed2571f45da9e9b18b8c87cb 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 7.0E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_1674 779ef8b9ed2571f45da9e9b18b8c87cb 219 Pfam PF00072 Response regulator receiver domain 4 116 6.0E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_1674 779ef8b9ed2571f45da9e9b18b8c87cb 219 SMART SM00448 2 115 2.0E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_1674 779ef8b9ed2571f45da9e9b18b8c87cb 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_1674 779ef8b9ed2571f45da9e9b18b8c87cb 219 SMART SM00421 146 203 1.3E-16 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_1674 779ef8b9ed2571f45da9e9b18b8c87cb 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 2.7E-18 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_1940 b435573ca2ba6429b02865a2340e4768 57 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 2 54 1.5E-18 T 15-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 XDD1_1786 d3309cb0beb96515c86d2ae25a9e5edd 167 Gene3D G3DSA:3.90.1720.10 46 167 1.5E-38 T 15-10-2018 XDD1_1786 d3309cb0beb96515c86d2ae25a9e5edd 167 SUPERFAMILY SSF54001 46 167 4.25E-39 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily XDD1_1786 d3309cb0beb96515c86d2ae25a9e5edd 167 Pfam PF00877 NlpC/P60 family 61 166 2.3E-28 T 15-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain XDD1_1002 a1cc2b26b4d8459079da74a158f0157c 299 SUPERFAMILY SSF51621 18 295 2.02E-69 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XDD1_1002 a1cc2b26b4d8459079da74a158f0157c 299 Gene3D G3DSA:3.20.20.60 15 296 3.9E-75 T 15-10-2018 XDD1_1002 a1cc2b26b4d8459079da74a158f0157c 299 TIGRFAM TIGR02320 PEP_mutase: phosphoenolpyruvate mutase 19 285 1.3E-101 T 15-10-2018 IPR012698 Phosphoenolpyruvate phosphomutase, core GO:0050188 KEGG: 00440+5.4.2.9|MetaCyc: PWY-5757|MetaCyc: PWY-6322|MetaCyc: PWY-6682|MetaCyc: PWY-6839|MetaCyc: PWY-7419|MetaCyc: PWY-7510|MetaCyc: PWY-7769 XDD1_1002 a1cc2b26b4d8459079da74a158f0157c 299 Pfam PF13714 Phosphoenolpyruvate phosphomutase 21 260 6.3E-62 T 15-10-2018 XDD1_2322 1a1166e3e0c4600a56dc68aff412b1e3 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 3.4E-33 T 15-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 XDD1_2322 1a1166e3e0c4600a56dc68aff412b1e3 89 PIRSF PIRSF004669 1 89 3.1E-32 T 15-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 XDD1_2322 1a1166e3e0c4600a56dc68aff412b1e3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.6E-23 T 15-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 XDD1_2322 1a1166e3e0c4600a56dc68aff412b1e3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.6E-23 T 15-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 XDD1_2322 1a1166e3e0c4600a56dc68aff412b1e3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.6E-23 T 15-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 XDD1_2322 1a1166e3e0c4600a56dc68aff412b1e3 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.0E-29 T 15-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 XDD1_2114 f5297cb0568141e39b9f277a76956ea5 401 Pfam PF12704 MacB-like periplasmic core domain 31 235 1.5E-20 T 15-10-2018 IPR025857 MacB-like periplasmic core domain XDD1_2114 f5297cb0568141e39b9f277a76956ea5 401 Pfam PF02687 FtsX-like permease family 306 394 5.2E-10 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 XDD1_1236 b312a354d075253841d4112242333adc 740 Pfam PF07715 TonB-dependent Receptor Plug Domain 79 179 4.5E-12 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain XDD1_1236 b312a354d075253841d4112242333adc 740 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 81 740 7.7E-107 T 15-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 XDD1_1236 b312a354d075253841d4112242333adc 740 Gene3D G3DSA:2.170.130.10 56 188 6.6E-34 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XDD1_1236 b312a354d075253841d4112242333adc 740 Gene3D G3DSA:2.40.170.20 189 740 6.3E-158 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XDD1_1236 b312a354d075253841d4112242333adc 740 SUPERFAMILY SSF56935 69 740 5.49E-123 T 15-10-2018 XDD1_1236 b312a354d075253841d4112242333adc 740 Pfam PF00593 TonB dependent receptor 259 739 4.4E-48 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XDD1_1236 b312a354d075253841d4112242333adc 740 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 723 740 - T 15-10-2018 IPR010917 TonB-dependent receptor, conserved site XDD1_0768 c8d61fd7a427da59e6669224aeebbe9e 245 SUPERFAMILY SSF53474 6 237 2.34E-26 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_0768 c8d61fd7a427da59e6669224aeebbe9e 245 Gene3D G3DSA:3.40.50.1820 4 236 1.8E-38 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_0768 c8d61fd7a427da59e6669224aeebbe9e 245 Pfam PF00975 Thioesterase domain 9 229 9.7E-23 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 XDD1_2883 782d664f932375209f043f2815bd7c01 390 Gene3D G3DSA:1.10.580.10 44 370 6.9E-125 T 15-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 XDD1_2883 782d664f932375209f043f2815bd7c01 390 ProSitePatterns PS00480 Citrate synthase signature. 273 285 - T 15-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 XDD1_2883 782d664f932375209f043f2815bd7c01 390 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 23 390 3.6E-154 T 15-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 XDD1_2883 782d664f932375209f043f2815bd7c01 390 PRINTS PR00143 Citrate synthase signature 266 286 2.2E-36 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 XDD1_2883 782d664f932375209f043f2815bd7c01 390 PRINTS PR00143 Citrate synthase signature 343 357 2.2E-36 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 XDD1_2883 782d664f932375209f043f2815bd7c01 390 PRINTS PR00143 Citrate synthase signature 323 339 2.2E-36 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 XDD1_2883 782d664f932375209f043f2815bd7c01 390 PRINTS PR00143 Citrate synthase signature 191 206 2.2E-36 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 XDD1_2883 782d664f932375209f043f2815bd7c01 390 PRINTS PR00143 Citrate synthase signature 213 241 2.2E-36 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 XDD1_2883 782d664f932375209f043f2815bd7c01 390 PRINTS PR00143 Citrate synthase signature 141 154 2.2E-36 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 XDD1_2883 782d664f932375209f043f2815bd7c01 390 Gene3D G3DSA:1.10.230.10 239 337 6.9E-125 T 15-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain XDD1_2883 782d664f932375209f043f2815bd7c01 390 SUPERFAMILY SSF48256 24 381 5.5E-120 T 15-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 XDD1_2883 782d664f932375209f043f2815bd7c01 390 PIRSF PIRSF001369 17 390 7.3E-106 T 15-10-2018 IPR024176 Citrate synthase, bacterial-type XDD1_2883 782d664f932375209f043f2815bd7c01 390 Pfam PF00285 Citrate synthase, C-terminal domain 24 372 3.3E-112 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 XDD1_1820 14ce7dc8fed8f2c562c8306fa33b1624 914 SUPERFAMILY SSF56731 121 368 8.89E-32 T 15-10-2018 XDD1_1820 14ce7dc8fed8f2c562c8306fa33b1624 914 Gene3D G3DSA:3.90.580.10 1 98 8.1E-29 T 15-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 XDD1_1820 14ce7dc8fed8f2c562c8306fa33b1624 914 SUPERFAMILY SSF57783 1 95 8.33E-28 T 15-10-2018 XDD1_1820 14ce7dc8fed8f2c562c8306fa33b1624 914 Pfam PF01807 CHC2 zinc finger 6 90 2.9E-23 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XDD1_1820 14ce7dc8fed8f2c562c8306fa33b1624 914 SMART SM00400 36 90 3.5E-20 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XDD1_1820 14ce7dc8fed8f2c562c8306fa33b1624 914 Pfam PF13155 Toprim-like 256 343 7.4E-17 T 15-10-2018 XDD1_1820 14ce7dc8fed8f2c562c8306fa33b1624 914 Gene3D G3DSA:3.90.980.10 115 231 1.9E-6 T 15-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily XDD1_1820 14ce7dc8fed8f2c562c8306fa33b1624 914 Gene3D G3DSA:3.40.1360.10 244 356 6.9E-19 T 15-10-2018 XDD1_2621 920e3f22d6bb5dec0c826180fc86c0a0 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 15-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 XDD1_2621 920e3f22d6bb5dec0c826180fc86c0a0 436 PIRSF PIRSF000429 9 436 3.8E-120 T 15-10-2018 IPR002155 Thiolase GO:0016747 XDD1_2621 920e3f22d6bb5dec0c826180fc86c0a0 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 67.811 T 15-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 XDD1_2621 920e3f22d6bb5dec0c826180fc86c0a0 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 15-10-2018 IPR020613 Thiolase, conserved site GO:0016747 XDD1_2621 920e3f22d6bb5dec0c826180fc86c0a0 436 Pfam PF02803 Thiolase, C-terminal domain 296 434 6.9E-36 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 XDD1_2621 920e3f22d6bb5dec0c826180fc86c0a0 436 SUPERFAMILY SSF53901 15 294 8.18E-62 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2621 920e3f22d6bb5dec0c826180fc86c0a0 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 11 436 1.1E-247 T 15-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 XDD1_2621 920e3f22d6bb5dec0c826180fc86c0a0 436 SUPERFAMILY SSF53901 297 435 3.39E-31 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2621 920e3f22d6bb5dec0c826180fc86c0a0 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 3.4E-61 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 XDD1_2621 920e3f22d6bb5dec0c826180fc86c0a0 436 Gene3D G3DSA:3.40.47.10 6 435 5.6E-112 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2621 920e3f22d6bb5dec0c826180fc86c0a0 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 15-10-2018 IPR020610 Thiolase, active site GO:0016747 XDD1_2621 920e3f22d6bb5dec0c826180fc86c0a0 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 7.2E-132 T 15-10-2018 IPR002155 Thiolase GO:0016747 XDD1_2115 c1a82e8f46745315c50acdb3174e735d 479 Gene3D G3DSA:1.20.1600.10 35 474 3.2E-70 T 15-10-2018 XDD1_2115 c1a82e8f46745315c50acdb3174e735d 479 Pfam PF02321 Outer membrane efflux protein 44 262 1.2E-16 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 XDD1_2115 c1a82e8f46745315c50acdb3174e735d 479 Pfam PF02321 Outer membrane efflux protein 286 467 4.5E-19 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 XDD1_2115 c1a82e8f46745315c50acdb3174e735d 479 SUPERFAMILY SSF56954 6 471 1.96E-58 T 15-10-2018 XDD1_1553 bdd853f4c858f58e1b12d828dcbfe903 591 Pfam PF00664 ABC transporter transmembrane region 63 289 1.3E-11 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XDD1_1553 bdd853f4c858f58e1b12d828dcbfe903 591 SUPERFAMILY SSF90123 7 332 1.44E-37 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_1553 bdd853f4c858f58e1b12d828dcbfe903 591 Gene3D G3DSA:1.20.1560.10 2 326 2.1E-26 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_1553 bdd853f4c858f58e1b12d828dcbfe903 591 SUPERFAMILY SSF52540 340 580 5.33E-74 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1553 bdd853f4c858f58e1b12d828dcbfe903 591 Gene3D G3DSA:3.40.50.300 338 590 3.0E-79 T 15-10-2018 XDD1_1553 bdd853f4c858f58e1b12d828dcbfe903 591 SMART SM00382 370 555 2.9E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1553 bdd853f4c858f58e1b12d828dcbfe903 591 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_1553 bdd853f4c858f58e1b12d828dcbfe903 591 Pfam PF00005 ABC transporter 361 508 4.0E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1553 bdd853f4c858f58e1b12d828dcbfe903 591 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 7 539 5.8E-154 T 15-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 XDD1_3720 e0f1f10214792c16ed3bd17d46d6837c 640 Pfam PF05593 RHS Repeat 272 305 1.1E-5 T 15-10-2018 IPR031325 RHS repeat XDD1_3720 e0f1f10214792c16ed3bd17d46d6837c 640 Pfam PF14331 ImcF-related N-terminal domain 150 229 3.7E-27 T 15-10-2018 IPR025743 ImcF-related, N-terminal domain XDD1_3720 e0f1f10214792c16ed3bd17d46d6837c 640 SUPERFAMILY SSF52540 70 276 1.18E-6 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3720 e0f1f10214792c16ed3bd17d46d6837c 640 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 436 517 2.9E-23 T 15-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 XDD1_3720 e0f1f10214792c16ed3bd17d46d6837c 640 Pfam PF03527 RHS protein 408 442 3.9E-7 T 15-10-2018 IPR001826 RHS protein XDD1_3720 e0f1f10214792c16ed3bd17d46d6837c 640 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 297 327 7.1E-7 T 15-10-2018 IPR006530 YD repeat XDD1_3720 e0f1f10214792c16ed3bd17d46d6837c 640 Gene3D G3DSA:2.180.10.10 241 517 2.4E-36 T 15-10-2018 XDD1_1307 1384651f90ae381661c233fdf910a004 329 Gene3D G3DSA:1.10.10.60 218 273 1.5E-8 T 15-10-2018 XDD1_1307 1384651f90ae381661c233fdf910a004 329 Gene3D G3DSA:3.40.50.880 1 210 3.0E-30 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_1307 1384651f90ae381661c233fdf910a004 329 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 277 319 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 XDD1_1307 1384651f90ae381661c233fdf910a004 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 292 307 3.3E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 XDD1_1307 1384651f90ae381661c233fdf910a004 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 307 323 3.3E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 XDD1_1307 1384651f90ae381661c233fdf910a004 329 SMART SM00342 240 323 1.1E-27 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_1307 1384651f90ae381661c233fdf910a004 329 Pfam PF01965 DJ-1/PfpI family 36 166 1.9E-7 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 XDD1_1307 1384651f90ae381661c233fdf910a004 329 SUPERFAMILY SSF46689 276 327 2.33E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1307 1384651f90ae381661c233fdf910a004 329 SUPERFAMILY SSF52317 6 201 1.2E-21 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_1307 1384651f90ae381661c233fdf910a004 329 SUPERFAMILY SSF46689 223 275 2.15E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1307 1384651f90ae381661c233fdf910a004 329 Pfam PF12833 Helix-turn-helix domain 246 324 8.1E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_1307 1384651f90ae381661c233fdf910a004 329 Gene3D G3DSA:1.10.10.60 274 327 1.8E-17 T 15-10-2018 XDD1_3347 26f5449f62efb7d4d3f335d7d37e5241 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 9.4E-24 T 15-10-2018 IPR006696 Protein of unknown function DUF423 XDD1_1206 613ef3bcee1d95e5f082773619c5b8e1 453 SUPERFAMILY SSF47446 329 431 1.8E-38 T 15-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 XDD1_1206 613ef3bcee1d95e5f082773619c5b8e1 453 Gene3D G3DSA:1.10.260.30 328 450 1.3E-46 T 15-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 XDD1_1206 613ef3bcee1d95e5f082773619c5b8e1 453 Gene3D G3DSA:3.40.50.300 90 285 4.6E-123 T 15-10-2018 XDD1_1206 613ef3bcee1d95e5f082773619c5b8e1 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.1E-178 T 15-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 XDD1_1206 613ef3bcee1d95e5f082773619c5b8e1 453 SMART SM00962 100 296 2.1E-118 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XDD1_1206 613ef3bcee1d95e5f082773619c5b8e1 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.557 T 15-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 XDD1_1206 613ef3bcee1d95e5f082773619c5b8e1 453 SMART SM00963 1 86 9.1E-37 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XDD1_1206 613ef3bcee1d95e5f082773619c5b8e1 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 295 1.7E-75 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XDD1_1206 613ef3bcee1d95e5f082773619c5b8e1 453 SUPERFAMILY SSF52540 42 354 5.42E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1206 613ef3bcee1d95e5f082773619c5b8e1 453 Pfam PF02978 Signal peptide binding domain 329 427 4.1E-33 T 15-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 XDD1_1206 613ef3bcee1d95e5f082773619c5b8e1 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XDD1_1206 613ef3bcee1d95e5f082773619c5b8e1 453 SMART SM00382 99 247 1.2E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1206 613ef3bcee1d95e5f082773619c5b8e1 453 Gene3D G3DSA:1.20.120.140 4 305 4.6E-123 T 15-10-2018 XDD1_1206 613ef3bcee1d95e5f082773619c5b8e1 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 6.3E-22 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XDD1_3647 a272088f3c98c01ff9a826e07b3353a3 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 2.5E-34 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 XDD1_3647 a272088f3c98c01ff9a826e07b3353a3 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 2.5E-34 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 XDD1_3647 a272088f3c98c01ff9a826e07b3353a3 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 2.5E-34 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 XDD1_3647 a272088f3c98c01ff9a826e07b3353a3 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 2.5E-34 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 XDD1_3647 a272088f3c98c01ff9a826e07b3353a3 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 70 123 5.2E-17 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 XDD1_3647 a272088f3c98c01ff9a826e07b3353a3 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 15-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XDD1_3647 a272088f3c98c01ff9a826e07b3353a3 127 Gene3D G3DSA:1.20.5.1030 66 123 3.0E-16 T 15-10-2018 IPR038379 SecE superfamily XDD1_3647 a272088f3c98c01ff9a826e07b3353a3 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 4.7E-20 T 15-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XDD1_3647 a272088f3c98c01ff9a826e07b3353a3 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 12.616 T 15-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XDD1_2771 33a61f5d030cf8498324520b63b8c22c 338 SMART SM00530 34 90 3.3E-4 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_2771 33a61f5d030cf8498324520b63b8c22c 338 Pfam PF13413 Helix-turn-helix domain 35 94 1.2E-14 T 15-10-2018 XDD1_2771 33a61f5d030cf8498324520b63b8c22c 338 SUPERFAMILY SSF47413 29 93 5.63E-7 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_2771 33a61f5d030cf8498324520b63b8c22c 338 Gene3D G3DSA:1.10.260.40 23 129 2.2E-21 T 15-10-2018 XDD1_2771 33a61f5d030cf8498324520b63b8c22c 338 Pfam PF13464 Domain of unknown function (DUF4115) 263 337 3.5E-20 T 15-10-2018 IPR025194 Domain of unknown function DUF4115 XDD1_1579 d7b27859f6814822b1ac3c98b3c3fb3d 65 SUPERFAMILY SSF158997 6 61 2.49E-19 T 15-10-2018 XDD1_1579 d7b27859f6814822b1ac3c98b3c3fb3d 65 Gene3D G3DSA:2.20.25.10 14 65 5.5E-22 T 15-10-2018 XDD1_1579 d7b27859f6814822b1ac3c98b3c3fb3d 65 Pfam PF03966 Trm112p-like protein 8 47 6.9E-8 T 15-10-2018 IPR005651 Trm112-like XDD1_1579 d7b27859f6814822b1ac3c98b3c3fb3d 65 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 7 60 25.922 T 15-10-2018 IPR038053 Uncharacterised protein family UPF0434 XDD1_1554 30dc99f99a1ace71221b7905c435b217 589 SMART SM00382 376 561 2.4E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1554 30dc99f99a1ace71221b7905c435b217 589 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 557 1.2E-189 T 15-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 XDD1_1554 30dc99f99a1ace71221b7905c435b217 589 Gene3D G3DSA:3.40.50.300 336 587 5.9E-66 T 15-10-2018 XDD1_1554 30dc99f99a1ace71221b7905c435b217 589 Pfam PF00005 ABC transporter 370 514 1.8E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1554 30dc99f99a1ace71221b7905c435b217 589 Gene3D G3DSA:1.20.1560.10 2 335 2.6E-46 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_1554 30dc99f99a1ace71221b7905c435b217 589 SUPERFAMILY SSF52540 364 583 2.66E-62 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1554 30dc99f99a1ace71221b7905c435b217 589 Pfam PF00664 ABC transporter transmembrane region 26 292 6.3E-36 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XDD1_1554 30dc99f99a1ace71221b7905c435b217 589 SUPERFAMILY SSF90123 8 328 9.94E-53 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_1554 30dc99f99a1ace71221b7905c435b217 589 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_1825 fef82b3917f109d8c076a5e4895d5a3c 340 Pfam PF00589 Phage integrase family 127 299 1.7E-41 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XDD1_1825 fef82b3917f109d8c076a5e4895d5a3c 340 Gene3D G3DSA:1.10.150.130 7 122 2.9E-18 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal XDD1_1825 fef82b3917f109d8c076a5e4895d5a3c 340 SUPERFAMILY SSF56349 11 306 1.53E-54 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XDD1_1825 fef82b3917f109d8c076a5e4895d5a3c 340 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 12 103 1.1E-6 T 15-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 XDD1_1825 fef82b3917f109d8c076a5e4895d5a3c 340 Gene3D G3DSA:1.10.443.10 125 308 1.1E-53 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XDD1_1811 2142104d93dd31b489254447bfedac78 276 Gene3D G3DSA:3.40.50.1980 140 271 6.6E-44 T 15-10-2018 XDD1_1811 2142104d93dd31b489254447bfedac78 276 SUPERFAMILY SSF53807 19 266 8.24E-47 T 15-10-2018 XDD1_1811 2142104d93dd31b489254447bfedac78 276 Pfam PF01497 Periplasmic binding protein 22 246 8.2E-31 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain XDD1_1811 2142104d93dd31b489254447bfedac78 276 Gene3D G3DSA:3.40.50.1980 18 139 4.6E-39 T 15-10-2018 XDD1_3392 b331942d012f06555cba5686b16df51a 161 SUPERFAMILY SSF53597 1 160 1.31E-55 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XDD1_3392 b331942d012f06555cba5686b16df51a 161 Gene3D G3DSA:3.40.430.10 1 161 1.6E-56 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XDD1_3392 b331942d012f06555cba5686b16df51a 161 PIRSF PIRSF000194 1 161 7.1E-57 T 15-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 XDD1_3392 b331942d012f06555cba5686b16df51a 161 PRINTS PR00070 Dihydrofolate reductase signature 14 24 4.2E-13 T 15-10-2018 XDD1_3392 b331942d012f06555cba5686b16df51a 161 PRINTS PR00070 Dihydrofolate reductase signature 91 105 4.2E-13 T 15-10-2018 XDD1_3392 b331942d012f06555cba5686b16df51a 161 PRINTS PR00070 Dihydrofolate reductase signature 41 52 4.2E-13 T 15-10-2018 XDD1_3392 b331942d012f06555cba5686b16df51a 161 PRINTS PR00070 Dihydrofolate reductase signature 28 36 4.2E-13 T 15-10-2018 XDD1_3392 b331942d012f06555cba5686b16df51a 161 Pfam PF00186 Dihydrofolate reductase 3 159 3.9E-57 T 15-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 XDD1_3392 b331942d012f06555cba5686b16df51a 161 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 15-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 XDD1_2815 cbde3538576674d65ba68eef35668654 215 PIRSF PIRSF016938 1 202 2.7E-26 T 15-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 XDD1_2815 cbde3538576674d65ba68eef35668654 215 SUPERFAMILY SSF89069 1 66 4.05E-18 T 15-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 XDD1_2815 cbde3538576674d65ba68eef35668654 215 Gene3D G3DSA:1.10.10.880 1 66 4.0E-25 T 15-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 XDD1_2815 cbde3538576674d65ba68eef35668654 215 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 134 188 2.2E-16 T 15-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal XDD1_2815 cbde3538576674d65ba68eef35668654 215 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 86 4.3E-34 T 15-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 XDD1_2931 f6a9a6ce034cfa223be79c980a03300a 226 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 19 195 33.414 T 15-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 XDD1_2931 f6a9a6ce034cfa223be79c980a03300a 226 Pfam PF02677 Uncharacterized BCR, COG1636 19 193 1.9E-64 T 15-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 XDD1_0748 117a9955afd22f904c3c7173fcd59a8b 215 SUPERFAMILY SSF55729 95 194 4.72E-10 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_0748 117a9955afd22f904c3c7173fcd59a8b 215 Gene3D G3DSA:3.40.630.30 40 193 9.1E-8 T 15-10-2018 XDD1_1671 df77de159a403a485cdf02d5a046dc7b 308 SUPERFAMILY SSF103481 190 290 3.66E-10 T 15-10-2018 XDD1_1671 df77de159a403a485cdf02d5a046dc7b 308 SUPERFAMILY SSF103481 42 144 7.45E-12 T 15-10-2018 XDD1_1671 df77de159a403a485cdf02d5a046dc7b 308 Pfam PF00892 EamA-like transporter family 8 142 1.4E-20 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_1671 df77de159a403a485cdf02d5a046dc7b 308 Pfam PF00892 EamA-like transporter family 156 290 1.3E-21 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_2077 6549c93bfe308233edab832223f3cef9 491 SUPERFAMILY SSF55347 176 488 1.67E-112 T 15-10-2018 XDD1_2077 6549c93bfe308233edab832223f3cef9 491 Gene3D G3DSA:3.40.50.720 12 437 1.2E-169 T 15-10-2018 XDD1_2077 6549c93bfe308233edab832223f3cef9 491 PIRSF PIRSF000110 1 491 3.1E-181 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XDD1_2077 6549c93bfe308233edab832223f3cef9 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 2.6E-59 T 15-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XDD1_2077 6549c93bfe308233edab832223f3cef9 491 Gene3D G3DSA:3.30.360.10 176 476 1.2E-169 T 15-10-2018 XDD1_2077 6549c93bfe308233edab832223f3cef9 491 SUPERFAMILY SSF51735 5 189 1.71E-57 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2077 6549c93bfe308233edab832223f3cef9 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 1.0E-47 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XDD1_2077 6549c93bfe308233edab832223f3cef9 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 1.0E-47 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XDD1_2077 6549c93bfe308233edab832223f3cef9 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 1.0E-47 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XDD1_2077 6549c93bfe308233edab832223f3cef9 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 1.0E-47 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XDD1_2077 6549c93bfe308233edab832223f3cef9 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 1.0E-47 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XDD1_2077 6549c93bfe308233edab832223f3cef9 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 489 90.163 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XDD1_2077 6549c93bfe308233edab832223f3cef9 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 489 4.8E-197 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XDD1_2077 6549c93bfe308233edab832223f3cef9 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 1.4E-115 T 15-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XDD1_2077 6549c93bfe308233edab832223f3cef9 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 15-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XDD1_0099 d855c59a35ab2e09176f18e2b499a7c4 396 Pfam PF07690 Major Facilitator Superfamily 20 195 6.9E-16 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0099 d855c59a35ab2e09176f18e2b499a7c4 396 Gene3D G3DSA:1.20.1250.20 209 393 4.9E-10 T 15-10-2018 XDD1_0099 d855c59a35ab2e09176f18e2b499a7c4 396 Gene3D G3DSA:1.20.1250.20 8 197 5.2E-17 T 15-10-2018 XDD1_0099 d855c59a35ab2e09176f18e2b499a7c4 396 SUPERFAMILY SSF103473 13 390 1.11E-38 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0656 5bb1e574d6a10d877440fbeccc4d5f73 126 Pfam PF05899 Protein of unknown function (DUF861) 43 116 5.1E-15 T 15-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 XDD1_0656 5bb1e574d6a10d877440fbeccc4d5f73 126 SUPERFAMILY SSF51182 26 117 1.11E-14 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily XDD1_0656 5bb1e574d6a10d877440fbeccc4d5f73 126 Gene3D G3DSA:2.60.120.10 13 118 3.6E-20 T 15-10-2018 IPR014710 RmlC-like jelly roll fold XDD1_1834 fe5ecd3680a19441bb52063982e69c27 914 SUPERFAMILY SSF56731 121 368 6.28E-25 T 15-10-2018 XDD1_1834 fe5ecd3680a19441bb52063982e69c27 914 Pfam PF01807 CHC2 zinc finger 6 90 5.1E-23 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XDD1_1834 fe5ecd3680a19441bb52063982e69c27 914 SMART SM00400 36 90 3.6E-20 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XDD1_1834 fe5ecd3680a19441bb52063982e69c27 914 Gene3D G3DSA:3.40.1360.10 243 356 4.0E-19 T 15-10-2018 XDD1_1834 fe5ecd3680a19441bb52063982e69c27 914 SUPERFAMILY SSF57783 1 95 1.24E-27 T 15-10-2018 XDD1_1834 fe5ecd3680a19441bb52063982e69c27 914 Gene3D G3DSA:3.90.580.10 1 98 9.9E-29 T 15-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 XDD1_1834 fe5ecd3680a19441bb52063982e69c27 914 Pfam PF13155 Toprim-like 256 343 8.5E-17 T 15-10-2018 XDD1_3152 9eb986e2feb5ab75c65dd7e4f55d4a07 269 Hamap MF_01974 Methionine aminopeptidase [map]. 7 254 39.623 T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 XDD1_3152 9eb986e2feb5ab75c65dd7e4f55d4a07 269 Pfam PF00557 Metallopeptidase family M24 16 244 8.4E-56 T 15-10-2018 IPR000994 Peptidase M24 XDD1_3152 9eb986e2feb5ab75c65dd7e4f55d4a07 269 Gene3D G3DSA:3.90.230.10 6 262 1.0E-108 T 15-10-2018 XDD1_3152 9eb986e2feb5ab75c65dd7e4f55d4a07 269 SUPERFAMILY SSF55920 7 258 1.44E-89 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like XDD1_3152 9eb986e2feb5ab75c65dd7e4f55d4a07 269 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 171 189 - T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 XDD1_3152 9eb986e2feb5ab75c65dd7e4f55d4a07 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 95 111 5.1E-18 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XDD1_3152 9eb986e2feb5ab75c65dd7e4f55d4a07 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 208 5.1E-18 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XDD1_3152 9eb986e2feb5ab75c65dd7e4f55d4a07 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 165 177 5.1E-18 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XDD1_3152 9eb986e2feb5ab75c65dd7e4f55d4a07 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 73 86 5.1E-18 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XDD1_3152 9eb986e2feb5ab75c65dd7e4f55d4a07 269 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 7 253 9.1E-93 T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 XDD1_2735 698d212206e3e46e775b181c26885e4a 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 273 2.8E-33 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_2735 698d212206e3e46e775b181c26885e4a 276 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 8 269 3.7E-113 T 15-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 XDD1_2735 698d212206e3e46e775b181c26885e4a 276 SUPERFAMILY SSF161098 16 263 2.75E-58 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_2735 698d212206e3e46e775b181c26885e4a 276 Gene3D G3DSA:1.10.3720.10 14 270 2.9E-70 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_2735 698d212206e3e46e775b181c26885e4a 276 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 8 268 1.1E-110 T 15-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 XDD1_2215 7520bb4c4a656877e271f4ab8027d0b8 519 Pfam PF04715 Anthranilate synthase component I, N terminal region 21 189 8.9E-16 T 15-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XDD1_2215 7520bb4c4a656877e271f4ab8027d0b8 519 Gene3D G3DSA:3.60.120.10 2 519 2.7E-192 T 15-10-2018 IPR005801 ADC synthase GO:0009058 XDD1_2215 7520bb4c4a656877e271f4ab8027d0b8 519 PIRSF PIRSF001373 1 519 1.3E-244 T 15-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XDD1_2215 7520bb4c4a656877e271f4ab8027d0b8 519 SUPERFAMILY SSF56322 13 510 6.28E-164 T 15-10-2018 IPR005801 ADC synthase GO:0009058 XDD1_2215 7520bb4c4a656877e271f4ab8027d0b8 519 Pfam PF00425 chorismate binding enzyme 241 501 3.3E-88 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal XDD1_2215 7520bb4c4a656877e271f4ab8027d0b8 519 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 514 1.2E-228 T 15-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XDD1_2215 7520bb4c4a656877e271f4ab8027d0b8 519 PRINTS PR00095 Anthranilate synthase component I signature 458 472 3.7E-23 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XDD1_2215 7520bb4c4a656877e271f4ab8027d0b8 519 PRINTS PR00095 Anthranilate synthase component I signature 363 376 3.7E-23 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XDD1_2215 7520bb4c4a656877e271f4ab8027d0b8 519 PRINTS PR00095 Anthranilate synthase component I signature 349 362 3.7E-23 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XDD1_2215 7520bb4c4a656877e271f4ab8027d0b8 519 PRINTS PR00095 Anthranilate synthase component I signature 443 457 3.7E-23 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XDD1_2494 11aa797c598418d2cdc83aab7b7b7a1f 189 Gene3D G3DSA:3.40.50.10610 54 189 3.3E-50 T 15-10-2018 XDD1_2494 11aa797c598418d2cdc83aab7b7b7a1f 189 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 1 189 34.212 T 15-10-2018 IPR014094 Penicillin-binding protein activator LpoB XDD1_2494 11aa797c598418d2cdc83aab7b7b7a1f 189 Pfam PF13036 Peptidoglycan-synthase activator LpoB 50 187 1.0E-30 T 15-10-2018 IPR014094 Penicillin-binding protein activator LpoB XDD1_2494 11aa797c598418d2cdc83aab7b7b7a1f 189 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 2 188 2.2E-45 T 15-10-2018 IPR014094 Penicillin-binding protein activator LpoB XDD1_2090 062290a2d218396a3bf12832badb946a 361 Gene3D G3DSA:1.10.530.10 99 349 1.4E-85 T 15-10-2018 XDD1_2090 062290a2d218396a3bf12832badb946a 361 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 56 353 4.8E-109 T 15-10-2018 IPR011970 Lytic murein transglycosylase XDD1_2090 062290a2d218396a3bf12832badb946a 361 SUPERFAMILY SSF53955 48 354 3.66E-91 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily XDD1_2090 062290a2d218396a3bf12832badb946a 361 Gene3D G3DSA:1.10.8.350 67 233 1.4E-85 T 15-10-2018 XDD1_2090 062290a2d218396a3bf12832badb946a 361 Pfam PF13406 Transglycosylase SLT domain 57 350 1.3E-100 T 15-10-2018 IPR031304 Transglycosylase SLT domain 2 XDD1_3964 3a67eb65d8481c239ff3a7ca7c737b6a 237 Gene3D G3DSA:2.40.160.90 108 237 8.6E-24 T 15-10-2018 XDD1_3964 3a67eb65d8481c239ff3a7ca7c737b6a 237 Pfam PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B 123 236 1.8E-12 T 15-10-2018 IPR001677 Transferrin-binding protein, C-lobe/N-lobe beta barrel domain XDD1_3964 3a67eb65d8481c239ff3a7ca7c737b6a 237 SUPERFAMILY SSF56925 91 236 3.14E-25 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel XDD1_2707 ff6074675a8336d1a9919530e13834cc 169 SUPERFAMILY SSF51261 12 168 1.05E-56 T 15-10-2018 IPR011055 Duplicated hybrid motif XDD1_2707 ff6074675a8336d1a9919530e13834cc 169 Gene3D G3DSA:2.70.70.10 9 169 5.2E-63 T 15-10-2018 IPR011055 Duplicated hybrid motif XDD1_2707 ff6074675a8336d1a9919530e13834cc 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 1.1E-49 T 15-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 XDD1_2707 ff6074675a8336d1a9919530e13834cc 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 2.6E-50 T 15-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 XDD1_2707 ff6074675a8336d1a9919530e13834cc 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 15-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 XDD1_1509 eb0cc2b00981687249d66be971bac821 390 SUPERFAMILY SSF46785 13 66 3.84E-9 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1509 eb0cc2b00981687249d66be971bac821 390 SUPERFAMILY SSF53613 73 355 6.24E-55 T 15-10-2018 IPR029056 Ribokinase-like XDD1_1509 eb0cc2b00981687249d66be971bac821 390 Gene3D G3DSA:3.40.1190.20 70 370 2.8E-72 T 15-10-2018 IPR029056 Ribokinase-like XDD1_1509 eb0cc2b00981687249d66be971bac821 390 Gene3D G3DSA:1.10.10.10 8 61 4.4E-9 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1509 eb0cc2b00981687249d66be971bac821 390 Pfam PF00294 pfkB family carbohydrate kinase 71 358 1.4E-54 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB XDD1_1509 eb0cc2b00981687249d66be971bac821 390 Pfam PF13412 Winged helix-turn-helix DNA-binding 13 57 2.4E-11 T 15-10-2018 XDD1_1048 03c8b1418c332ea0d8febec50cc8341b 288 Pfam PF06445 GyrI-like small molecule binding domain 136 287 5.9E-27 T 15-10-2018 IPR029442 GyrI-like small molecule binding domain XDD1_1048 03c8b1418c332ea0d8febec50cc8341b 288 SMART SM00871 135 288 2.9E-29 T 15-10-2018 IPR010499 Bacterial transcription activator, effector binding XDD1_1048 03c8b1418c332ea0d8febec50cc8341b 288 Gene3D G3DSA:1.10.10.60 3 59 1.7E-10 T 15-10-2018 XDD1_1048 03c8b1418c332ea0d8febec50cc8341b 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 59 101 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 XDD1_1048 03c8b1418c332ea0d8febec50cc8341b 288 SMART SM00342 22 105 8.3E-24 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_1048 03c8b1418c332ea0d8febec50cc8341b 288 SUPERFAMILY SSF55136 136 287 2.62E-27 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily XDD1_1048 03c8b1418c332ea0d8febec50cc8341b 288 Gene3D G3DSA:3.20.80.10 135 288 5.1E-32 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily XDD1_1048 03c8b1418c332ea0d8febec50cc8341b 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 89 105 5.4E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 XDD1_1048 03c8b1418c332ea0d8febec50cc8341b 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 74 89 5.4E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 XDD1_1048 03c8b1418c332ea0d8febec50cc8341b 288 SUPERFAMILY SSF46689 6 57 7.17E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1048 03c8b1418c332ea0d8febec50cc8341b 288 SUPERFAMILY SSF46689 58 117 1.66E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1048 03c8b1418c332ea0d8febec50cc8341b 288 Pfam PF12833 Helix-turn-helix domain 30 106 1.7E-20 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_1048 03c8b1418c332ea0d8febec50cc8341b 288 Gene3D G3DSA:1.10.10.60 60 120 2.1E-16 T 15-10-2018 XDD1_2566 b165c40341d81f2fbd7bb7347c45fa51 482 ProSitePatterns PS00455 Putative AMP-binding domain signature. 162 173 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2566 b165c40341d81f2fbd7bb7347c45fa51 482 Gene3D G3DSA:3.30.300.30 378 477 4.3E-12 T 15-10-2018 XDD1_2566 b165c40341d81f2fbd7bb7347c45fa51 482 Pfam PF00501 AMP-binding enzyme 22 380 5.4E-51 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2566 b165c40341d81f2fbd7bb7347c45fa51 482 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 43 470 1.1E-109 T 15-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 XDD1_2566 b165c40341d81f2fbd7bb7347c45fa51 482 SUPERFAMILY SSF56801 20 477 1.57E-91 T 15-10-2018 XDD1_2566 b165c40341d81f2fbd7bb7347c45fa51 482 Gene3D G3DSA:3.40.50.12780 15 377 2.7E-67 T 15-10-2018 XDD1_3121 30d433a7e7e81d3a86a73d929f783569 278 Pfam PF01497 Periplasmic binding protein 39 241 8.2E-29 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain XDD1_3121 30d433a7e7e81d3a86a73d929f783569 278 Gene3D G3DSA:3.40.50.1980 156 278 9.6E-34 T 15-10-2018 XDD1_3121 30d433a7e7e81d3a86a73d929f783569 278 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 12 278 47.09 T 15-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 XDD1_3121 30d433a7e7e81d3a86a73d929f783569 278 Gene3D G3DSA:3.40.50.1980 35 154 4.9E-36 T 15-10-2018 XDD1_3121 30d433a7e7e81d3a86a73d929f783569 278 SUPERFAMILY SSF53807 37 277 2.28E-56 T 15-10-2018 XDD1_2352 8aa267d135095032c06fe60c58ac7848 701 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 80 99 3.7E-56 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 XDD1_2352 8aa267d135095032c06fe60c58ac7848 701 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 166 184 3.7E-56 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 XDD1_2352 8aa267d135095032c06fe60c58ac7848 701 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 147 163 3.7E-56 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 XDD1_2352 8aa267d135095032c06fe60c58ac7848 701 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 247 261 3.7E-56 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 XDD1_2352 8aa267d135095032c06fe60c58ac7848 701 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 43 56 3.7E-56 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 XDD1_2352 8aa267d135095032c06fe60c58ac7848 701 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 196 213 3.7E-56 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 XDD1_2352 8aa267d135095032c06fe60c58ac7848 701 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 27 697 1.8E-274 T 15-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 XDD1_2352 8aa267d135095032c06fe60c58ac7848 701 Pfam PF00771 FHIPEP family 36 689 6.9E-265 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 XDD1_2352 8aa267d135095032c06fe60c58ac7848 701 PIRSF PIRSF005419 19 700 8.1E-242 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 XDD1_2352 8aa267d135095032c06fe60c58ac7848 701 Gene3D G3DSA:1.10.8.540 512 600 1.8E-28 T 15-10-2018 XDD1_2352 8aa267d135095032c06fe60c58ac7848 701 Gene3D G3DSA:1.10.490.80 604 697 3.1E-6 T 15-10-2018 XDD1_2352 8aa267d135095032c06fe60c58ac7848 701 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 152 175 - T 15-10-2018 IPR025505 FHIPEP conserved site XDD1_2352 8aa267d135095032c06fe60c58ac7848 701 Gene3D G3DSA:3.40.30.60 368 511 2.3E-49 T 15-10-2018 XDD1_0455 d187862fbfb4c90d6e0a01d42bbadcf8 312 PIRSF PIRSF000102 1 310 9.8E-61 T 15-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 XDD1_0455 d187862fbfb4c90d6e0a01d42bbadcf8 312 Gene3D G3DSA:3.40.50.720 1 146 7.7E-64 T 15-10-2018 XDD1_0455 d187862fbfb4c90d6e0a01d42bbadcf8 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 58.27 T 15-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 XDD1_0455 d187862fbfb4c90d6e0a01d42bbadcf8 312 SUPERFAMILY SSF56327 146 311 2.93E-44 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 XDD1_0455 d187862fbfb4c90d6e0a01d42bbadcf8 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 3.2E-45 T 15-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 XDD1_0455 d187862fbfb4c90d6e0a01d42bbadcf8 312 Gene3D G3DSA:3.90.110.10 147 312 1.9E-55 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 XDD1_0455 d187862fbfb4c90d6e0a01d42bbadcf8 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 1.0E-135 T 15-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 XDD1_0455 d187862fbfb4c90d6e0a01d42bbadcf8 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 2.6E-50 T 15-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 XDD1_0455 d187862fbfb4c90d6e0a01d42bbadcf8 312 SUPERFAMILY SSF51735 1 145 1.18E-38 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0455 d187862fbfb4c90d6e0a01d42bbadcf8 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 15-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 XDD1_2784 336d59167f5aea61d72500fbc9cbea9a 173 Gene3D G3DSA:1.10.287.110 1 79 4.6E-24 T 15-10-2018 IPR036869 Chaperone J-domain superfamily XDD1_2784 336d59167f5aea61d72500fbc9cbea9a 173 SUPERFAMILY SSF46565 1 74 2.36E-18 T 15-10-2018 IPR036869 Chaperone J-domain superfamily XDD1_2784 336d59167f5aea61d72500fbc9cbea9a 173 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.735 T 15-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 XDD1_2784 336d59167f5aea61d72500fbc9cbea9a 173 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 2.1E-17 T 15-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 XDD1_2784 336d59167f5aea61d72500fbc9cbea9a 173 SMART SM00271 1 66 2.6E-8 T 15-10-2018 IPR001623 DnaJ domain XDD1_2784 336d59167f5aea61d72500fbc9cbea9a 173 SUPERFAMILY SSF47144 77 171 8.76E-26 T 15-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 XDD1_2784 336d59167f5aea61d72500fbc9cbea9a 173 Gene3D G3DSA:1.20.1280.20 80 171 6.9E-26 T 15-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 XDD1_2784 336d59167f5aea61d72500fbc9cbea9a 173 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 2.2E-48 T 15-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 XDD1_0698 35d87402da54ccb391cb132864a5d59e 106 Pfam PF01906 Putative heavy-metal-binding 3 105 9.0E-40 T 15-10-2018 IPR002765 Uncharacterised protein family UPF0145 XDD1_0698 35d87402da54ccb391cb132864a5d59e 106 SUPERFAMILY SSF117782 1 105 7.32E-38 T 15-10-2018 IPR035439 UPF0145 domain superfamily XDD1_0698 35d87402da54ccb391cb132864a5d59e 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.629 T 15-10-2018 IPR002765 Uncharacterised protein family UPF0145 XDD1_0698 35d87402da54ccb391cb132864a5d59e 106 Gene3D G3DSA:3.30.110.70 3 106 4.7E-46 T 15-10-2018 XDD1_0479 df6757039333d2497966913f995ea601 139 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 103 2.0E-45 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 XDD1_0479 df6757039333d2497966913f995ea601 139 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 116 26.064 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 XDD1_0479 df6757039333d2497966913f995ea601 139 ProSitePatterns PS01319 Ribosome-binding factor A signature. 82 103 - T 15-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 XDD1_0479 df6757039333d2497966913f995ea601 139 Gene3D G3DSA:3.30.300.20 1 111 4.3E-39 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta XDD1_0479 df6757039333d2497966913f995ea601 139 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 121 1.4E-40 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 XDD1_0479 df6757039333d2497966913f995ea601 139 Pfam PF02033 Ribosome-binding factor A 7 115 1.9E-31 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 XDD1_0479 df6757039333d2497966913f995ea601 139 SUPERFAMILY SSF89919 2 110 2.09E-32 T 15-10-2018 IPR023799 Ribosome-binding factor A domain superfamily XDD1_2989 33bab14f401537c3094d361340b73012 290 Gene3D G3DSA:3.30.70.100 179 273 2.2E-24 T 15-10-2018 XDD1_2989 33bab14f401537c3094d361340b73012 290 Pfam PF05552 Conserved TM helix 16 64 1.3E-13 T 15-10-2018 IPR008910 Conserved TM helix XDD1_2989 33bab14f401537c3094d361340b73012 290 SUPERFAMILY SSF82689 181 279 2.35E-30 T 15-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 XDD1_2989 33bab14f401537c3094d361340b73012 290 Pfam PF00924 Mechanosensitive ion channel 71 268 2.7E-55 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 XDD1_2989 33bab14f401537c3094d361340b73012 290 Gene3D G3DSA:2.30.30.60 129 177 3.3E-19 T 15-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily XDD1_2989 33bab14f401537c3094d361340b73012 290 SUPERFAMILY SSF82861 28 112 1.83E-17 T 15-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 XDD1_2989 33bab14f401537c3094d361340b73012 290 SUPERFAMILY SSF50182 114 179 2.98E-16 T 15-10-2018 IPR010920 LSM domain superfamily XDD1_2989 33bab14f401537c3094d361340b73012 290 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 15-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 XDD1_0426 c24f0e63b66e2bbd43cd6576c617df6b 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 4.0E-201 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XDD1_0426 c24f0e63b66e2bbd43cd6576c617df6b 432 Gene3D G3DSA:3.90.170.10 267 432 2.5E-69 T 15-10-2018 XDD1_0426 c24f0e63b66e2bbd43cd6576c617df6b 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 15-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XDD1_0426 c24f0e63b66e2bbd43cd6576c617df6b 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 2.1E-178 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XDD1_0426 c24f0e63b66e2bbd43cd6576c617df6b 432 Gene3D G3DSA:1.10.300.10 102 201 7.5E-107 T 15-10-2018 XDD1_0426 c24f0e63b66e2bbd43cd6576c617df6b 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 216.403 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XDD1_0426 c24f0e63b66e2bbd43cd6576c617df6b 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 15-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XDD1_0426 c24f0e63b66e2bbd43cd6576c617df6b 432 Gene3D G3DSA:3.40.440.10 6 249 7.5E-107 T 15-10-2018 XDD1_0426 c24f0e63b66e2bbd43cd6576c617df6b 432 SUPERFAMILY SSF52540 3 431 6.59E-179 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0426 c24f0e63b66e2bbd43cd6576c617df6b 432 SMART SM00788 4 425 4.5E-297 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XDD1_3963 861f4b8760a7da47c114cee98a6447de 286 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 20 285 32.522 T 15-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 XDD1_3963 861f4b8760a7da47c114cee98a6447de 286 Gene3D G3DSA:3.40.140.10 138 286 1.9E-43 T 15-10-2018 XDD1_3963 861f4b8760a7da47c114cee98a6447de 286 SUPERFAMILY SSF53927 35 285 1.35E-75 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 XDD1_3963 861f4b8760a7da47c114cee98a6447de 286 Pfam PF02634 FdhD/NarQ family 48 284 1.1E-68 T 15-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 XDD1_3963 861f4b8760a7da47c114cee98a6447de 286 Gene3D G3DSA:3.10.20.10 50 136 6.6E-9 T 15-10-2018 XDD1_3963 861f4b8760a7da47c114cee98a6447de 286 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 44 285 4.5E-85 T 15-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 XDD1_3963 861f4b8760a7da47c114cee98a6447de 286 PIRSF PIRSF015626 16 286 1.3E-79 T 15-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 XDD1_3901 290cc2f51d51e5a1b2a2be0ed4a7ede4 349 SUPERFAMILY SSF53098 222 322 1.08E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3901 290cc2f51d51e5a1b2a2be0ed4a7ede4 349 SUPERFAMILY SSF46689 17 131 2.15E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3901 290cc2f51d51e5a1b2a2be0ed4a7ede4 349 Gene3D G3DSA:3.30.420.470 133 342 7.6E-12 T 15-10-2018 XDD1_3901 290cc2f51d51e5a1b2a2be0ed4a7ede4 349 Pfam PF13592 Winged helix-turn helix 100 155 3.4E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_3901 290cc2f51d51e5a1b2a2be0ed4a7ede4 349 Pfam PF13551 Winged helix-turn helix 32 88 9.9E-9 T 15-10-2018 XDD1_3901 290cc2f51d51e5a1b2a2be0ed4a7ede4 349 Pfam PF13358 DDE superfamily endonuclease 169 313 2.9E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_3038 a769b850428e6f0155aa7322291cadbb 168 Hamap MF_00163 Peptide deformylase [def]. 2 162 29.978 T 15-10-2018 IPR023635 Peptide deformylase XDD1_3038 a769b850428e6f0155aa7322291cadbb 168 PIRSF PIRSF004749 1 168 1.7E-51 T 15-10-2018 IPR023635 Peptide deformylase XDD1_3038 a769b850428e6f0155aa7322291cadbb 168 Pfam PF01327 Polypeptide deformylase 4 152 3.5E-49 T 15-10-2018 IPR023635 Peptide deformylase XDD1_3038 a769b850428e6f0155aa7322291cadbb 168 Gene3D G3DSA:3.90.45.10 1 168 4.8E-64 T 15-10-2018 IPR036821 Peptide deformylase superfamily XDD1_3038 a769b850428e6f0155aa7322291cadbb 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 6.4E-51 T 15-10-2018 IPR023635 Peptide deformylase XDD1_3038 a769b850428e6f0155aa7322291cadbb 168 PRINTS PR01576 Peptide deformylase signature 101 119 4.3E-32 T 15-10-2018 IPR023635 Peptide deformylase XDD1_3038 a769b850428e6f0155aa7322291cadbb 168 PRINTS PR01576 Peptide deformylase signature 120 149 4.3E-32 T 15-10-2018 IPR023635 Peptide deformylase XDD1_3038 a769b850428e6f0155aa7322291cadbb 168 PRINTS PR01576 Peptide deformylase signature 33 62 4.3E-32 T 15-10-2018 IPR023635 Peptide deformylase XDD1_3038 a769b850428e6f0155aa7322291cadbb 168 PRINTS PR01576 Peptide deformylase signature 89 100 4.3E-32 T 15-10-2018 IPR023635 Peptide deformylase XDD1_3038 a769b850428e6f0155aa7322291cadbb 168 SUPERFAMILY SSF56420 2 162 4.06E-58 T 15-10-2018 IPR036821 Peptide deformylase superfamily XDD1_p0007 9901f13f7ed5deff168097bff4ee4f70 129 Pfam PF04352 ProQ/FINO family 22 121 3.9E-18 T 15-10-2018 IPR016103 ProQ/FinO domain XDD1_p0007 9901f13f7ed5deff168097bff4ee4f70 129 SMART SM00945 16 129 9.7E-4 T 15-10-2018 IPR016103 ProQ/FinO domain XDD1_p0007 9901f13f7ed5deff168097bff4ee4f70 129 SUPERFAMILY SSF48657 14 121 3.27E-26 T 15-10-2018 IPR036442 ProQ/FinO domain superfamily XDD1_p0007 9901f13f7ed5deff168097bff4ee4f70 129 Gene3D G3DSA:1.10.1710.10 1 126 4.4E-28 T 15-10-2018 IPR036442 ProQ/FinO domain superfamily XDD1_3459 0f67429da451b29331673b5ded19ea69 357 Gene3D G3DSA:1.20.58.1390 104 317 1.3E-113 T 15-10-2018 XDD1_3459 0f67429da451b29331673b5ded19ea69 357 Gene3D G3DSA:3.40.50.150 169 352 1.3E-113 T 15-10-2018 XDD1_3459 0f67429da451b29331673b5ded19ea69 357 Gene3D G3DSA:1.10.10.10 3 101 4.2E-31 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3459 0f67429da451b29331673b5ded19ea69 357 Pfam PF00891 O-methyltransferase 166 336 3.5E-15 T 15-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 XDD1_3459 0f67429da451b29331673b5ded19ea69 357 SUPERFAMILY SSF53335 102 346 1.01E-36 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_1970 8476bdd5cd6c6817f7c3f817fd8517ee 329 Gene3D G3DSA:1.10.3470.10 2 328 1.3E-87 T 15-10-2018 IPR037294 ABC transporter, BtuC-like XDD1_1970 8476bdd5cd6c6817f7c3f817fd8517ee 329 SUPERFAMILY SSF81345 4 324 3.01E-75 T 15-10-2018 IPR037294 ABC transporter, BtuC-like XDD1_1970 8476bdd5cd6c6817f7c3f817fd8517ee 329 Pfam PF01032 FecCD transport family 14 324 5.3E-86 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 XDD1_3765 3a09e339fda7b58d7a6e131a5e2ae9a7 165 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 160 4.4E-55 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 XDD1_3765 3a09e339fda7b58d7a6e131a5e2ae9a7 165 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 159 6.9E-56 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 XDD1_3765 3a09e339fda7b58d7a6e131a5e2ae9a7 165 PIRSF PIRSF028301 1 165 2.5E-61 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 XDD1_0372 9d27283e0b1a9a4562d1f43fd5b9d735 721 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 15-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 XDD1_0372 9d27283e0b1a9a4562d1f43fd5b9d735 721 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 4.5E-75 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 XDD1_0372 9d27283e0b1a9a4562d1f43fd5b9d735 721 Gene3D G3DSA:3.40.50.300 281 636 6.9E-135 T 15-10-2018 XDD1_0372 9d27283e0b1a9a4562d1f43fd5b9d735 721 SUPERFAMILY SSF52540 7 641 4.93E-181 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0372 9d27283e0b1a9a4562d1f43fd5b9d735 721 Pfam PF13361 UvrD-like helicase C-terminal domain 278 616 2.9E-74 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 XDD1_0372 9d27283e0b1a9a4562d1f43fd5b9d735 721 Gene3D G3DSA:3.40.50.300 10 274 7.9E-105 T 15-10-2018 XDD1_0372 9d27283e0b1a9a4562d1f43fd5b9d735 721 Gene3D G3DSA:1.10.486.10 382 538 6.9E-135 T 15-10-2018 XDD1_0372 9d27283e0b1a9a4562d1f43fd5b9d735 721 Gene3D G3DSA:1.10.10.160 114 187 7.9E-105 T 15-10-2018 IPR013986 DExx box DNA helicase domain superfamily XDD1_2724 d0a4169954d4168417f3fe625e1a4742 363 Gene3D G3DSA:3.40.190.10 144 284 8.8E-29 T 15-10-2018 XDD1_2724 d0a4169954d4168417f3fe625e1a4742 363 Pfam PF13416 Bacterial extracellular solute-binding protein 57 332 5.2E-25 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein XDD1_2724 d0a4169954d4168417f3fe625e1a4742 363 SUPERFAMILY SSF53850 37 337 2.76E-41 T 15-10-2018 XDD1_2724 d0a4169954d4168417f3fe625e1a4742 363 Gene3D G3DSA:3.40.190.10 56 340 8.8E-29 T 15-10-2018 XDD1_1756 8d20e7873004454c010ddb45025d7d6b 289 PIRSF PIRSF006221 1 289 1.9E-89 T 15-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 XDD1_1756 8d20e7873004454c010ddb45025d7d6b 289 SUPERFAMILY SSF56112 3 271 1.33E-36 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily XDD1_1756 8d20e7873004454c010ddb45025d7d6b 289 Gene3D G3DSA:3.90.1200.10 99 288 4.6E-56 T 15-10-2018 XDD1_1756 8d20e7873004454c010ddb45025d7d6b 289 Gene3D G3DSA:3.30.200.20 1 92 1.7E-20 T 15-10-2018 XDD1_1756 8d20e7873004454c010ddb45025d7d6b 289 Pfam PF03881 Fructosamine kinase 1 286 5.4E-114 T 15-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 XDD1_2072 f34fc16793c71e0a12210298f3397fa9 437 Gene3D G3DSA:3.10.450.350 81 171 5.4E-11 T 15-10-2018 XDD1_2072 f34fc16793c71e0a12210298f3397fa9 437 SUPERFAMILY SSF51261 161 405 1.62E-69 T 15-10-2018 IPR011055 Duplicated hybrid motif XDD1_2072 f34fc16793c71e0a12210298f3397fa9 437 Pfam PF01551 Peptidase family M23 310 404 1.8E-33 T 15-10-2018 IPR016047 Peptidase M23 XDD1_2072 f34fc16793c71e0a12210298f3397fa9 437 Gene3D G3DSA:3.10.450.350 177 279 4.3E-31 T 15-10-2018 XDD1_2072 f34fc16793c71e0a12210298f3397fa9 437 Gene3D G3DSA:2.70.70.10 281 410 8.5E-48 T 15-10-2018 IPR011055 Duplicated hybrid motif XDD1_2072 f34fc16793c71e0a12210298f3397fa9 437 Pfam PF08525 Opacity-associated protein A N-terminal motif 11 38 2.7E-8 T 15-10-2018 IPR013731 Opacity-associated protein A, N-terminal XDD1_2760 25e212f95a9a39b29231ced35df55d68 353 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 179 348 2.6E-43 T 15-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 XDD1_2760 25e212f95a9a39b29231ced35df55d68 353 Pfam PF16485 Protealysin propeptide 9 48 2.3E-10 T 15-10-2018 IPR032475 Protealysin, N-terminal propeptide XDD1_2760 25e212f95a9a39b29231ced35df55d68 353 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 61 176 2.0E-32 T 15-10-2018 IPR013856 Peptidase M4 domain GO:0004222 XDD1_2760 25e212f95a9a39b29231ced35df55d68 353 Gene3D G3DSA:1.10.390.10 181 349 5.9E-54 T 15-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily XDD1_2760 25e212f95a9a39b29231ced35df55d68 353 Gene3D G3DSA:3.10.170.10 4 180 7.3E-62 T 15-10-2018 XDD1_2760 25e212f95a9a39b29231ced35df55d68 353 SUPERFAMILY SSF55486 65 348 9.34E-72 T 15-10-2018 XDD1_2760 25e212f95a9a39b29231ced35df55d68 353 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 271 287 1.4E-24 T 15-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 XDD1_2760 25e212f95a9a39b29231ced35df55d68 353 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 188 199 1.4E-24 T 15-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 XDD1_2760 25e212f95a9a39b29231ced35df55d68 353 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 131 151 1.4E-24 T 15-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 XDD1_2760 25e212f95a9a39b29231ced35df55d68 353 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 167 183 1.4E-24 T 15-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 XDD1_2860 f40fc13471b581113d4ef79050471313 88 Pfam PF04606 Ogr/Delta-like zinc finger 7 53 1.1E-18 T 15-10-2018 IPR007684 Zinc finger, Ogr/Delta-type XDD1_2484 be49bff13cac3c93865717b5586ce8fb 245 Gene3D G3DSA:3.40.50.1220 10 229 3.0E-82 T 15-10-2018 XDD1_2484 be49bff13cac3c93865717b5586ce8fb 245 Gene3D G3DSA:3.30.1600.10 24 160 3.0E-82 T 15-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily XDD1_2484 be49bff13cac3c93865717b5586ce8fb 245 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 8 238 59.131 T 15-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 XDD1_2484 be49bff13cac3c93865717b5586ce8fb 245 SUPERFAMILY SSF52467 9 237 6.0E-75 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily XDD1_2484 be49bff13cac3c93865717b5586ce8fb 245 Pfam PF02146 Sir2 family 15 188 3.4E-52 T 15-10-2018 IPR003000 Sirtuin family GO:0070403 XDD1_3358 0a5af7b34a00e2efdbbf72bf3ba8ca80 415 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 189 403 3.9E-51 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 XDD1_3358 0a5af7b34a00e2efdbbf72bf3ba8ca80 415 Pfam PF11741 AMIN domain 39 142 1.2E-24 T 15-10-2018 IPR021731 AMIN domain XDD1_3358 0a5af7b34a00e2efdbbf72bf3ba8ca80 415 SUPERFAMILY SSF53187 187 406 1.76E-54 T 15-10-2018 XDD1_3358 0a5af7b34a00e2efdbbf72bf3ba8ca80 415 SMART SM00646 249 403 6.1E-66 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 XDD1_3358 0a5af7b34a00e2efdbbf72bf3ba8ca80 415 Gene3D G3DSA:2.60.40.3500 26 145 2.2E-31 T 15-10-2018 XDD1_3358 0a5af7b34a00e2efdbbf72bf3ba8ca80 415 Gene3D G3DSA:3.40.630.40 175 415 7.0E-92 T 15-10-2018 XDD1_3099 ab77e83f1d22ad0c97b74a6c5ff46f72 217 Gene3D G3DSA:3.40.1050.10 1 217 2.5E-90 T 15-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 XDD1_3099 ab77e83f1d22ad0c97b74a6c5ff46f72 217 SUPERFAMILY SSF53056 2 211 6.28E-76 T 15-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 XDD1_3099 ab77e83f1d22ad0c97b74a6c5ff46f72 217 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 83 103 - T 15-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 XDD1_3099 ab77e83f1d22ad0c97b74a6c5ff46f72 217 SMART SM00947 31 193 4.2E-69 T 15-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 XDD1_3099 ab77e83f1d22ad0c97b74a6c5ff46f72 217 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 43 50 - T 15-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 XDD1_3099 ab77e83f1d22ad0c97b74a6c5ff46f72 217 Pfam PF00484 Carbonic anhydrase 39 189 1.3E-50 T 15-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 XDD1_0887 2a717bd7e206859cab6e74341f6b22cb 582 SUPERFAMILY SSF90123 7 322 1.44E-70 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_0887 2a717bd7e206859cab6e74341f6b22cb 582 Gene3D G3DSA:3.40.50.300 326 580 1.2E-81 T 15-10-2018 XDD1_0887 2a717bd7e206859cab6e74341f6b22cb 582 Gene3D G3DSA:1.20.1560.10 4 318 2.3E-73 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_0887 2a717bd7e206859cab6e74341f6b22cb 582 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_0887 2a717bd7e206859cab6e74341f6b22cb 582 SMART SM00382 361 547 3.1E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0887 2a717bd7e206859cab6e74341f6b22cb 582 Pfam PF00664 ABC transporter transmembrane region 21 291 4.3E-39 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XDD1_0887 2a717bd7e206859cab6e74341f6b22cb 582 Pfam PF00005 ABC transporter 352 500 3.9E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_0887 2a717bd7e206859cab6e74341f6b22cb 582 SUPERFAMILY SSF52540 326 572 9.46E-82 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0043 61e21c08e7120d39df05328de79f3d1d 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.746 T 15-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 XDD1_0043 61e21c08e7120d39df05328de79f3d1d 629 Gene3D G3DSA:3.50.50.60 293 458 4.6E-57 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0043 61e21c08e7120d39df05328de79f3d1d 629 Gene3D G3DSA:3.50.50.60 2 236 1.2E-91 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0043 61e21c08e7120d39df05328de79f3d1d 629 Pfam PF13932 GidA associated domain 402 616 9.7E-76 T 15-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 XDD1_0043 61e21c08e7120d39df05328de79f3d1d 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 15-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 XDD1_0043 61e21c08e7120d39df05328de79f3d1d 629 Pfam PF01134 Glucose inhibited division protein A 8 399 1.7E-170 T 15-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 XDD1_0043 61e21c08e7120d39df05328de79f3d1d 629 Gene3D G3DSA:1.10.10.1800 459 550 6.4E-29 T 15-10-2018 XDD1_0043 61e21c08e7120d39df05328de79f3d1d 629 SMART SM01228 546 617 8.9E-45 T 15-10-2018 XDD1_0043 61e21c08e7120d39df05328de79f3d1d 629 Gene3D G3DSA:1.10.150.570 569 622 4.8E-23 T 15-10-2018 XDD1_0043 61e21c08e7120d39df05328de79f3d1d 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 15-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 XDD1_0043 61e21c08e7120d39df05328de79f3d1d 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 3.7E-296 T 15-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 XDD1_0043 61e21c08e7120d39df05328de79f3d1d 629 SUPERFAMILY SSF51905 5 261 2.98E-51 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1411 63c3f6d22452bf1d7e4d864160e7d469 340 SUPERFAMILY SSF111369 41 111 2.62E-7 T 15-10-2018 XDD1_1411 63c3f6d22452bf1d7e4d864160e7d469 340 Gene3D G3DSA:2.40.50.100 43 76 1.1E-13 T 15-10-2018 XDD1_1411 63c3f6d22452bf1d7e4d864160e7d469 340 Gene3D G3DSA:1.10.287.470 77 109 1.1E-13 T 15-10-2018 XDD1_1411 63c3f6d22452bf1d7e4d864160e7d469 340 Gene3D G3DSA:2.40.50.100 207 241 2.0E-22 T 15-10-2018 XDD1_1411 63c3f6d22452bf1d7e4d864160e7d469 340 Gene3D G3DSA:1.10.287.470 179 206 2.0E-22 T 15-10-2018 XDD1_1411 63c3f6d22452bf1d7e4d864160e7d469 340 Gene3D G3DSA:1.10.287.470 110 177 1.1E-8 T 15-10-2018 XDD1_1411 63c3f6d22452bf1d7e4d864160e7d469 340 SUPERFAMILY SSF111369 179 289 4.05E-10 T 15-10-2018 XDD1_1411 63c3f6d22452bf1d7e4d864160e7d469 340 Gene3D G3DSA:2.40.30.170 242 322 2.0E-22 T 15-10-2018 XDD1_1411 63c3f6d22452bf1d7e4d864160e7d469 340 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 32 286 2.8E-13 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XDD1_2727 b903b878676f32234c2b7de92059f58e 355 Gene3D G3DSA:2.40.50.940 222 350 9.6E-8 T 15-10-2018 XDD1_2727 b903b878676f32234c2b7de92059f58e 355 Gene3D G3DSA:3.40.50.300 3 221 1.9E-65 T 15-10-2018 XDD1_2727 b903b878676f32234c2b7de92059f58e 355 Pfam PF00005 ABC transporter 20 161 3.3E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_2727 b903b878676f32234c2b7de92059f58e 355 SMART SM00382 28 211 5.2E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_2727 b903b878676f32234c2b7de92059f58e 355 SUPERFAMILY SSF52540 4 241 1.14E-81 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2727 b903b878676f32234c2b7de92059f58e 355 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_2727 b903b878676f32234c2b7de92059f58e 355 SUPERFAMILY SSF50331 267 353 1.62E-5 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal XDD1_2727 b903b878676f32234c2b7de92059f58e 355 Pfam PF08402 TOBE domain 280 351 5.5E-5 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 XDD1_2727 b903b878676f32234c2b7de92059f58e 355 Gene3D G3DSA:2.40.50.140 284 343 9.6E-8 T 15-10-2018 XDD1_1303 6f6e203e25e5ddb4d88f6294f1c67cb4 177 Gene3D G3DSA:3.40.50.360 2 177 2.7E-56 T 15-10-2018 IPR029039 Flavoprotein-like superfamily XDD1_1303 6f6e203e25e5ddb4d88f6294f1c67cb4 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 15-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 XDD1_1303 6f6e203e25e5ddb4d88f6294f1c67cb4 177 PIRSF PIRSF038996 1 173 1.5E-70 T 15-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 XDD1_1303 6f6e203e25e5ddb4d88f6294f1c67cb4 177 SUPERFAMILY SSF52218 4 171 4.35E-52 T 15-10-2018 IPR029039 Flavoprotein-like superfamily XDD1_1303 6f6e203e25e5ddb4d88f6294f1c67cb4 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 169 5.4E-75 T 15-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 XDD1_1303 6f6e203e25e5ddb4d88f6294f1c67cb4 177 Pfam PF00258 Flavodoxin 6 161 1.4E-32 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 XDD1_0642 0c6526d9db770b8d2456f33cc9194454 605 SUPERFAMILY SSF74863 60 173 1.14E-37 T 15-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily XDD1_0642 0c6526d9db770b8d2456f33cc9194454 605 ProSitePatterns PS00194 Thioredoxin family active site. 512 530 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XDD1_0642 0c6526d9db770b8d2456f33cc9194454 605 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 29 603 37.231 T 15-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 XDD1_0642 0c6526d9db770b8d2456f33cc9194454 605 Pfam PF11412 Disulphide bond corrector protein DsbC 61 168 4.9E-30 T 15-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain XDD1_0642 0c6526d9db770b8d2456f33cc9194454 605 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 211 416 1.9E-22 T 15-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 XDD1_0642 0c6526d9db770b8d2456f33cc9194454 605 SUPERFAMILY SSF52833 487 600 3.26E-23 T 15-10-2018 IPR036249 Thioredoxin-like superfamily XDD1_0642 0c6526d9db770b8d2456f33cc9194454 605 Gene3D G3DSA:3.40.30.10 479 605 3.6E-33 T 15-10-2018 XDD1_0642 0c6526d9db770b8d2456f33cc9194454 605 Gene3D G3DSA:2.60.40.1250 49 186 2.7E-42 T 15-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily XDD1_0642 0c6526d9db770b8d2456f33cc9194454 605 Pfam PF13899 Thioredoxin-like 504 576 5.0E-11 T 15-10-2018 XDD1_0637 dbbaaf83aabdc0c85dc3484516a17771 440 SUPERFAMILY SSF53474 189 423 1.29E-50 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_0637 dbbaaf83aabdc0c85dc3484516a17771 440 Pfam PF00756 Putative esterase 194 421 3.0E-38 T 15-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 XDD1_0637 dbbaaf83aabdc0c85dc3484516a17771 440 Gene3D G3DSA:3.40.50.1820 166 428 3.5E-68 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_0637 dbbaaf83aabdc0c85dc3484516a17771 440 SUPERFAMILY SSF81296 18 171 7.0E-44 T 15-10-2018 IPR014756 Immunoglobulin E-set XDD1_0637 dbbaaf83aabdc0c85dc3484516a17771 440 Pfam PF11806 Domain of unknown function (DUF3327) 48 176 5.0E-45 T 15-10-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 XDD1_0637 dbbaaf83aabdc0c85dc3484516a17771 440 Gene3D G3DSA:2.60.40.10 12 165 1.4E-53 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_0692 aa225e8c108952ec1bf52176e7d20d90 522 Gene3D G3DSA:3.40.50.300 28 264 4.3E-38 T 15-10-2018 XDD1_0692 aa225e8c108952ec1bf52176e7d20d90 522 SUPERFAMILY SSF52540 349 518 1.84E-30 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0692 aa225e8c108952ec1bf52176e7d20d90 522 SUPERFAMILY SSF52540 8 243 1.64E-32 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0692 aa225e8c108952ec1bf52176e7d20d90 522 SMART SM00382 357 520 2.4E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0692 aa225e8c108952ec1bf52176e7d20d90 522 SMART SM00382 28 214 4.3E-5 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0692 aa225e8c108952ec1bf52176e7d20d90 522 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_0692 aa225e8c108952ec1bf52176e7d20d90 522 Gene3D G3DSA:3.40.50.300 280 519 4.7E-33 T 15-10-2018 XDD1_0692 aa225e8c108952ec1bf52176e7d20d90 522 Pfam PF00005 ABC transporter 351 478 2.7E-14 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_0692 aa225e8c108952ec1bf52176e7d20d90 522 Pfam PF00005 ABC transporter 30 167 7.8E-16 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_3713 96036d690f9bfd048de91712ce95addf 769 SUPERFAMILY SSF69255 499 586 3.14E-34 T 15-10-2018 XDD1_3713 96036d690f9bfd048de91712ce95addf 769 SUPERFAMILY SSF69349 577 769 4.32E-40 T 15-10-2018 XDD1_3713 96036d690f9bfd048de91712ce95addf 769 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 145 655 1.3E-196 T 15-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset XDD1_3713 96036d690f9bfd048de91712ce95addf 769 Gene3D G3DSA:3.30.1920.30 357 420 2.2E-96 T 15-10-2018 XDD1_3713 96036d690f9bfd048de91712ce95addf 769 Gene3D G3DSA:2.40.50.230 492 591 2.4E-42 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XDD1_3713 96036d690f9bfd048de91712ce95addf 769 SUPERFAMILY SSF69279 326 500 2.55E-43 T 15-10-2018 XDD1_3713 96036d690f9bfd048de91712ce95addf 769 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 158 638 9.4E-168 T 15-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein XDD1_3713 96036d690f9bfd048de91712ce95addf 769 Pfam PF05954 Phage late control gene D protein (GPD) 165 464 5.0E-89 T 15-10-2018 XDD1_3713 96036d690f9bfd048de91712ce95addf 769 SUPERFAMILY SSF69279 146 321 3.8E-58 T 15-10-2018 XDD1_3713 96036d690f9bfd048de91712ce95addf 769 Gene3D G3DSA:2.30.110.50 154 464 2.2E-96 T 15-10-2018 XDD1_3713 96036d690f9bfd048de91712ce95addf 769 Gene3D G3DSA:3.55.50.10 234 325 2.2E-96 T 15-10-2018 XDD1_0800 eacc45a2914e2518aa411a7a972d9d7f 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 16 136 9.2E-65 T 15-10-2018 IPR014170 TonB system transport protein ExbD type-1 GO:0016020|GO:0055085 XDD1_0800 eacc45a2914e2518aa411a7a972d9d7f 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 133 9.2E-30 T 15-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 XDD1_0800 eacc45a2914e2518aa411a7a972d9d7f 141 Gene3D G3DSA:3.30.420.270 63 132 3.0E-27 T 15-10-2018 XDD1_3596 b8227ab8b8d53351161350ef4d874641 591 Pfam PF02785 Biotin carboxylase C-terminal domain 345 454 1.0E-36 T 15-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XDD1_3596 b8227ab8b8d53351161350ef4d874641 591 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XDD1_3596 b8227ab8b8d53351161350ef4d874641 591 Gene3D G3DSA:2.40.50.100 521 591 1.2E-18 T 15-10-2018 XDD1_3596 b8227ab8b8d53351161350ef4d874641 591 SMART SM00878 345 454 8.5E-59 T 15-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XDD1_3596 b8227ab8b8d53351161350ef4d874641 591 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 125 332 7.8E-79 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XDD1_3596 b8227ab8b8d53351161350ef4d874641 591 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 548 565 - T 15-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XDD1_3596 b8227ab8b8d53351161350ef4d874641 591 SUPERFAMILY SSF51230 515 591 1.23E-16 T 15-10-2018 IPR011053 Single hybrid motif XDD1_3596 b8227ab8b8d53351161350ef4d874641 591 Pfam PF00364 Biotin-requiring enzyme 526 588 4.0E-12 T 15-10-2018 IPR000089 Biotin/lipoyl attachment XDD1_3596 b8227ab8b8d53351161350ef4d874641 591 SUPERFAMILY SSF56059 93 337 2.65E-58 T 15-10-2018 XDD1_3596 b8227ab8b8d53351161350ef4d874641 591 Gene3D G3DSA:3.30.470.130 2 460 7.7E-179 T 15-10-2018 XDD1_3596 b8227ab8b8d53351161350ef4d874641 591 Pfam PF00289 Biotin carboxylase, N-terminal domain 12 120 1.5E-43 T 15-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XDD1_3596 b8227ab8b8d53351161350ef4d874641 591 SUPERFAMILY SSF51246 340 455 8.89E-38 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 XDD1_3596 b8227ab8b8d53351161350ef4d874641 591 SUPERFAMILY SSF52440 8 122 1.22E-46 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 181 197 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1115 1310 5.4E-30 T 15-10-2018 XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 Gene3D G3DSA:3.40.366.10 531 830 1.3E-107 T 15-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 Gene3D G3DSA:3.40.47.10 18 443 2.8E-138 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 Gene3D G3DSA:3.30.70.3290 458 859 1.3E-107 T 15-10-2018 XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 Pfam PF00698 Acyl transferase domain 533 832 4.7E-42 T 15-10-2018 IPR014043 Acyl transferase XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 20 268 2.0E-58 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 SUPERFAMILY SSF51735 1115 1336 6.41E-25 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 Pfam PF00550 Phosphopantetheine attachment site 1386 1443 7.2E-9 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 Pfam PF08659 KR domain 1118 1307 2.4E-33 T 15-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 Gene3D G3DSA:3.40.50.720 887 1361 3.0E-66 T 15-10-2018 XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 Gene3D G3DSA:1.10.1200.10 1373 1455 3.5E-10 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 277 389 1.3E-34 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 535 828 1.1E-61 T 15-10-2018 IPR020801 Polyketide synthase, acyl transferase domain XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 SMART SM00825 Beta-ketoacyl synthase 21 444 1.2E-135 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 SUPERFAMILY SSF53901 20 440 8.35E-70 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 SUPERFAMILY SSF47336 1381 1456 4.45E-11 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 395 507 7.1E-18 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 SUPERFAMILY SSF55048 657 718 9.68E-9 T 15-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 Gene3D G3DSA:3.30.70.250 658 718 1.3E-107 T 15-10-2018 XDD1_1802 bbfeb1ae61041fd3977ff174bcb0fce7 1487 SUPERFAMILY SSF52151 531 813 1.2E-54 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase XDD1_3072 80c82498124f6d8819aa522678b0c164 222 SUPERFAMILY SSF53335 1 217 1.31E-64 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_3072 80c82498124f6d8819aa522678b0c164 222 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 16 29 - T 15-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XDD1_3072 80c82498124f6d8819aa522678b0c164 222 Pfam PF01564 Spermine/spermidine synthase domain 1 174 8.8E-62 T 15-10-2018 XDD1_3072 80c82498124f6d8819aa522678b0c164 222 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 1 219 22.059 T 15-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XDD1_3072 80c82498124f6d8819aa522678b0c164 222 Gene3D G3DSA:3.40.50.150 1 219 9.5E-70 T 15-10-2018 XDD1_3072 80c82498124f6d8819aa522678b0c164 222 TIGRFAM TIGR00417 speE: spermidine synthase 1 213 1.0E-84 T 15-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XDD1_2792 391064805721361e0640a2c81a1c4239 417 Gene3D G3DSA:3.90.1150.10 10 395 9.0E-187 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_2792 391064805721361e0640a2c81a1c4239 417 PIRSF PIRSF000412 1 417 1.8E-172 T 15-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 XDD1_2792 391064805721361e0640a2c81a1c4239 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 15-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 XDD1_2792 391064805721361e0640a2c81a1c4239 417 Gene3D G3DSA:3.40.640.10 37 289 9.0E-187 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_2792 391064805721361e0640a2c81a1c4239 417 Pfam PF00464 Serine hydroxymethyltransferase 9 386 1.4E-186 T 15-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 XDD1_2792 391064805721361e0640a2c81a1c4239 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.05 T 15-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 XDD1_2792 391064805721361e0640a2c81a1c4239 417 SUPERFAMILY SSF53383 6 416 2.86E-184 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_2147 7a1d150a0f8b7c84d67aff6c52cdf123 141 Gene3D G3DSA:3.40.630.30 1 140 3.6E-30 T 15-10-2018 XDD1_2147 7a1d150a0f8b7c84d67aff6c52cdf123 141 SUPERFAMILY SSF55729 2 138 2.79E-23 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_2147 7a1d150a0f8b7c84d67aff6c52cdf123 141 Pfam PF13673 Acetyltransferase (GNAT) domain 38 133 7.4E-14 T 15-10-2018 IPR000182 GNAT domain XDD1_2819 99a9fa27dd1806c22c18a53bb69a0151 331 Gene3D G3DSA:3.40.50.1820 110 320 1.3E-7 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2819 99a9fa27dd1806c22c18a53bb69a0151 331 Pfam PF01764 Lipase (class 3) 179 211 9.5E-5 T 15-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 XDD1_2819 99a9fa27dd1806c22c18a53bb69a0151 331 SUPERFAMILY SSF53474 113 278 1.0E-14 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1232 321106145ba81568311177f481adf024 880 Pfam PF13302 Acetyltransferase (GNAT) domain 727 864 3.4E-8 T 15-10-2018 IPR000182 GNAT domain XDD1_1232 321106145ba81568311177f481adf024 880 Gene3D G3DSA:3.40.50.720 4 125 1.6E-30 T 15-10-2018 XDD1_1232 321106145ba81568311177f481adf024 880 Gene3D G3DSA:3.40.50.261 285 454 4.9E-39 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XDD1_1232 321106145ba81568311177f481adf024 880 Gene3D G3DSA:3.30.470.20 481 690 1.6E-56 T 15-10-2018 XDD1_1232 321106145ba81568311177f481adf024 880 SUPERFAMILY SSF51735 2 135 1.02E-30 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1232 321106145ba81568311177f481adf024 880 Gene3D G3DSA:3.40.50.261 126 283 1.3E-43 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XDD1_1232 321106145ba81568311177f481adf024 880 Pfam PF13549 ATP-grasp domain 472 694 1.0E-71 T 15-10-2018 XDD1_1232 321106145ba81568311177f481adf024 880 SMART SM00881 9 104 1.2E-22 T 15-10-2018 IPR003781 CoA-binding GO:0048037 XDD1_1232 321106145ba81568311177f481adf024 880 Gene3D G3DSA:3.30.1490.20 499 576 1.6E-56 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XDD1_1232 321106145ba81568311177f481adf024 880 SUPERFAMILY SSF56059 481 687 5.77E-26 T 15-10-2018 XDD1_1232 321106145ba81568311177f481adf024 880 Pfam PF13380 CoA binding domain 13 130 1.3E-19 T 15-10-2018 IPR003781 CoA-binding GO:0048037 XDD1_1232 321106145ba81568311177f481adf024 880 SUPERFAMILY SSF52210 287 447 6.67E-34 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XDD1_1232 321106145ba81568311177f481adf024 880 SUPERFAMILY SSF52210 125 286 1.44E-33 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XDD1_1232 321106145ba81568311177f481adf024 880 Gene3D G3DSA:3.40.630.30 709 880 6.3E-37 T 15-10-2018 XDD1_1232 321106145ba81568311177f481adf024 880 SUPERFAMILY SSF55729 728 866 1.01E-19 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_1232 321106145ba81568311177f481adf024 880 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 6.5E-42 T 15-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain XDD1_0704 ff524124e8b68b1c6f086a1819c98356 157 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 117 2.5E-43 T 15-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 XDD1_0704 ff524124e8b68b1c6f086a1819c98356 157 SUPERFAMILY SSF52980 2 154 4.02E-49 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 XDD1_0704 ff524124e8b68b1c6f086a1819c98356 157 Pfam PF03852 DNA mismatch endonuclease Vsr 2 74 6.3E-32 T 15-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 XDD1_0704 ff524124e8b68b1c6f086a1819c98356 157 PIRSF PIRSF018267 1 148 2.2E-47 T 15-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 XDD1_0704 ff524124e8b68b1c6f086a1819c98356 157 Gene3D G3DSA:3.40.960.10 21 156 4.1E-44 T 15-10-2018 XDD1_2165 aaa474ae145b14a33d6f8d20f1be2363 270 SUPERFAMILY SSF46689 218 265 5.82E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2165 aaa474ae145b14a33d6f8d20f1be2363 270 SMART SM00342 182 264 1.7E-18 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_2165 aaa474ae145b14a33d6f8d20f1be2363 270 Pfam PF02311 AraC-like ligand binding domain 19 146 7.4E-22 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 XDD1_2165 aaa474ae145b14a33d6f8d20f1be2363 270 SUPERFAMILY SSF46689 168 215 7.17E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2165 aaa474ae145b14a33d6f8d20f1be2363 270 SUPERFAMILY SSF51215 23 135 3.66E-21 T 15-10-2018 IPR037923 Transcription regulator HTH-like XDD1_2165 aaa474ae145b14a33d6f8d20f1be2363 270 Pfam PF12833 Helix-turn-helix domain 192 265 7.3E-18 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_2165 aaa474ae145b14a33d6f8d20f1be2363 270 Gene3D G3DSA:1.10.10.60 164 267 7.7E-24 T 15-10-2018 XDD1_3692 c32f97718f453ea2fc3e4b3ba8d1503c 461 Gene3D G3DSA:3.90.1150.170 48 444 2.8E-84 T 15-10-2018 XDD1_3692 c32f97718f453ea2fc3e4b3ba8d1503c 461 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 44 378 5.0E-35 T 15-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 XDD1_3692 c32f97718f453ea2fc3e4b3ba8d1503c 461 SUPERFAMILY SSF53383 15 457 7.11E-96 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_3692 c32f97718f453ea2fc3e4b3ba8d1503c 461 Gene3D G3DSA:3.40.640.10 103 341 2.8E-84 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_2150 6b6cdfe6695a2fe32981a565ea147218 161 Pfam PF12802 MarR family 49 109 6.0E-10 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_2150 6b6cdfe6695a2fe32981a565ea147218 161 SUPERFAMILY SSF46785 13 155 9.26E-31 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_2150 6b6cdfe6695a2fe32981a565ea147218 161 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 15-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site XDD1_2150 6b6cdfe6695a2fe32981a565ea147218 161 SMART SM00347 44 145 5.6E-22 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_2150 6b6cdfe6695a2fe32981a565ea147218 161 Gene3D G3DSA:1.10.10.10 1 158 3.2E-33 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2150 6b6cdfe6695a2fe32981a565ea147218 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 1.6E-9 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_2150 6b6cdfe6695a2fe32981a565ea147218 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 1.6E-9 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_2150 6b6cdfe6695a2fe32981a565ea147218 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 1.6E-9 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_2150 6b6cdfe6695a2fe32981a565ea147218 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 1.6E-9 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_3918 cd80643b226d33f4372ce88040b96a5e 314 Gene3D G3DSA:1.20.1260.10 9 314 7.6E-134 T 15-10-2018 IPR012347 Ferritin-like XDD1_3918 cd80643b226d33f4372ce88040b96a5e 314 SUPERFAMILY SSF47240 35 278 9.59E-82 T 15-10-2018 IPR009078 Ferritin-like superfamily XDD1_3918 cd80643b226d33f4372ce88040b96a5e 314 Pfam PF05138 Phenylacetic acid catabolic protein 25 299 1.2E-100 T 15-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 XDD1_3918 cd80643b226d33f4372ce88040b96a5e 314 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 15 303 2.1E-156 T 15-10-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149 XDD1_2843 c53b965f8a373eaf3ad0c0c5cca34108 88 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 7 87 2.0E-18 T 15-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 XDD1_2843 c53b965f8a373eaf3ad0c0c5cca34108 88 Pfam PF10963 Phage tail assembly chaperone 7 88 3.2E-35 T 15-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 XDD1_3431 c53b965f8a373eaf3ad0c0c5cca34108 88 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 7 87 2.0E-18 T 15-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 XDD1_3431 c53b965f8a373eaf3ad0c0c5cca34108 88 Pfam PF10963 Phage tail assembly chaperone 7 88 3.2E-35 T 15-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 XDD1_3083 9a6b4443a3737ff03cd0068e48345cf4 382 Gene3D G3DSA:3.30.2320.10 238 332 6.0E-14 T 15-10-2018 XDD1_3083 9a6b4443a3737ff03cd0068e48345cf4 382 Pfam PF05065 Phage capsid family 102 377 2.1E-60 T 15-10-2018 IPR024455 Phage capsid XDD1_3083 9a6b4443a3737ff03cd0068e48345cf4 382 Gene3D G3DSA:3.30.2400.10 140 340 6.0E-14 T 15-10-2018 XDD1_3083 9a6b4443a3737ff03cd0068e48345cf4 382 SUPERFAMILY SSF56563 94 380 5.36E-60 T 15-10-2018 XDD1_3083 9a6b4443a3737ff03cd0068e48345cf4 382 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 5 377 5.7E-92 T 15-10-2018 IPR024455 Phage capsid XDD1_2598 e4cbd3c25685592cd3a1743ea090a74a 262 SUPERFAMILY SSF50447 12 79 1.84E-12 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XDD1_2598 e4cbd3c25685592cd3a1743ea090a74a 262 Gene3D G3DSA:3.30.980.10 120 251 4.0E-18 T 15-10-2018 XDD1_2598 e4cbd3c25685592cd3a1743ea090a74a 262 Pfam PF01411 tRNA synthetases class II (A) 25 78 3.3E-8 T 15-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 XDD1_2598 e4cbd3c25685592cd3a1743ea090a74a 262 SUPERFAMILY SSF55186 121 248 1.22E-16 T 15-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 XDD1_2598 e4cbd3c25685592cd3a1743ea090a74a 262 Gene3D G3DSA:2.40.30.130 3 88 1.9E-16 T 15-10-2018 XDD1_3812 36ff2e85c2ef93ff77f74e9f89b1ca27 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 5.1E-70 T 15-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 XDD1_3812 36ff2e85c2ef93ff77f74e9f89b1ca27 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 3.1E-52 T 15-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 XDD1_3812 36ff2e85c2ef93ff77f74e9f89b1ca27 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.454 T 15-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 XDD1_3812 36ff2e85c2ef93ff77f74e9f89b1ca27 145 Gene3D G3DSA:3.50.80.10 1 145 9.8E-56 T 15-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily XDD1_3812 36ff2e85c2ef93ff77f74e9f89b1ca27 145 SUPERFAMILY SSF69500 1 144 1.44E-55 T 15-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily XDD1_3098 eb81bea5ba98d5c1d4e115b876b2be63 179 Gene3D G3DSA:3.40.50.2020 1 178 7.8E-64 T 15-10-2018 XDD1_3098 eb81bea5ba98d5c1d4e115b876b2be63 179 SUPERFAMILY SSF53271 2 174 9.31E-52 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like XDD1_3098 eb81bea5ba98d5c1d4e115b876b2be63 179 Pfam PF00156 Phosphoribosyl transferase domain 13 161 1.9E-23 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 XDD1_3098 eb81bea5ba98d5c1d4e115b876b2be63 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 174 1.3E-72 T 15-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 XDD1_2243 bb189d942aaf9c50cf5c93343ab2b6ee 282 Pfam PF00551 Formyl transferase 88 264 3.6E-52 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XDD1_2243 bb189d942aaf9c50cf5c93343ab2b6ee 282 SUPERFAMILY SSF53328 88 281 3.27E-60 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XDD1_2243 bb189d942aaf9c50cf5c93343ab2b6ee 282 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 282 45.616 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XDD1_2243 bb189d942aaf9c50cf5c93343ab2b6ee 282 SUPERFAMILY SSF55021 8 69 1.08E-8 T 15-10-2018 XDD1_2243 bb189d942aaf9c50cf5c93343ab2b6ee 282 Pfam PF01842 ACT domain 10 71 5.6E-8 T 15-10-2018 IPR002912 ACT domain XDD1_2243 bb189d942aaf9c50cf5c93343ab2b6ee 282 PIRSF PIRSF036480 6 282 1.1E-114 T 15-10-2018 XDD1_2243 bb189d942aaf9c50cf5c93343ab2b6ee 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 9.2E-66 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XDD1_2243 bb189d942aaf9c50cf5c93343ab2b6ee 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 9.2E-66 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XDD1_2243 bb189d942aaf9c50cf5c93343ab2b6ee 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 9.2E-66 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XDD1_2243 bb189d942aaf9c50cf5c93343ab2b6ee 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 9.2E-66 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XDD1_2243 bb189d942aaf9c50cf5c93343ab2b6ee 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 9.2E-66 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XDD1_2243 bb189d942aaf9c50cf5c93343ab2b6ee 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 43 55 9.2E-66 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XDD1_2243 bb189d942aaf9c50cf5c93343ab2b6ee 282 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 9 282 2.0E-127 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XDD1_2243 bb189d942aaf9c50cf5c93343ab2b6ee 282 Gene3D G3DSA:3.40.50.170 87 282 9.9E-68 T 15-10-2018 XDD1_2243 bb189d942aaf9c50cf5c93343ab2b6ee 282 Gene3D G3DSA:3.30.70.260 4 84 1.2E-15 T 15-10-2018 XDD1_3575 2fd0523807444929e2d7287fb88d21b2 285 Gene3D G3DSA:1.20.120.1810 4 122 9.8E-28 T 15-10-2018 XDD1_3575 2fd0523807444929e2d7287fb88d21b2 285 Pfam PF04542 Sigma-70 region 2 53 122 1.2E-16 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 XDD1_3575 2fd0523807444929e2d7287fb88d21b2 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 282 1.5E-35 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 XDD1_3575 2fd0523807444929e2d7287fb88d21b2 285 PIRSF PIRSF000770 4 285 1.4E-33 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3575 2fd0523807444929e2d7287fb88d21b2 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3575 2fd0523807444929e2d7287fb88d21b2 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3575 2fd0523807444929e2d7287fb88d21b2 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 5.6E-19 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3575 2fd0523807444929e2d7287fb88d21b2 285 PRINTS PR00046 Major sigma-70 factor signature 253 268 5.6E-19 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3575 2fd0523807444929e2d7287fb88d21b2 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 5.6E-19 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3575 2fd0523807444929e2d7287fb88d21b2 285 PRINTS PR00046 Major sigma-70 factor signature 268 279 5.6E-19 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XDD1_3575 2fd0523807444929e2d7287fb88d21b2 285 Pfam PF00140 Sigma-70 factor, region 1.2 21 40 2.3E-5 T 15-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XDD1_3575 2fd0523807444929e2d7287fb88d21b2 285 Gene3D G3DSA:1.10.10.10 214 283 1.1E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3575 2fd0523807444929e2d7287fb88d21b2 285 SUPERFAMILY SSF88946 12 122 1.44E-39 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 XDD1_3575 2fd0523807444929e2d7287fb88d21b2 285 Pfam PF04545 Sigma-70, region 4 229 280 4.8E-16 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 XDD1_3575 2fd0523807444929e2d7287fb88d21b2 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 54.378 T 15-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 XDD1_3575 2fd0523807444929e2d7287fb88d21b2 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 284 4.6E-130 T 15-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 XDD1_3575 2fd0523807444929e2d7287fb88d21b2 285 SUPERFAMILY SSF88659 200 283 1.46E-18 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XDD1_0457 c2fb418ef3d08a52d4e377d20be20e67 115 SUPERFAMILY SSF46955 3 74 6.5E-21 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily XDD1_0457 c2fb418ef3d08a52d4e377d20be20e67 115 Pfam PF02316 Mu DNA-binding domain 9 112 1.7E-13 T 15-10-2018 IPR003314 Mu-type HTH domain GO:0003677 XDD1_0457 c2fb418ef3d08a52d4e377d20be20e67 115 Gene3D G3DSA:1.10.10.10 2 75 1.3E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3401 2f1c129109a11f762aaab230c0b1bf40 454 Pfam PF02321 Outer membrane efflux protein 233 417 1.1E-32 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 XDD1_3401 2f1c129109a11f762aaab230c0b1bf40 454 Pfam PF02321 Outer membrane efflux protein 25 209 6.5E-26 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 XDD1_3401 2f1c129109a11f762aaab230c0b1bf40 454 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 432 4.5E-121 T 15-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 XDD1_3401 2f1c129109a11f762aaab230c0b1bf40 454 Gene3D G3DSA:1.20.1600.10 23 442 3.2E-135 T 15-10-2018 XDD1_3401 2f1c129109a11f762aaab230c0b1bf40 454 SUPERFAMILY SSF56954 24 435 3.92E-89 T 15-10-2018 XDD1_0726 d4b0b9d677929a3a905fe7a52d004120 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 529 0.0 T 15-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 XDD1_0726 d4b0b9d677929a3a905fe7a52d004120 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 6.6E-47 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_0726 d4b0b9d677929a3a905fe7a52d004120 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 4.2E-47 T 15-10-2018 IPR032090 Peptide chain release factor 3, C-terminal XDD1_0726 d4b0b9d677929a3a905fe7a52d004120 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 1.4E-9 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XDD1_0726 d4b0b9d677929a3a905fe7a52d004120 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_0726 d4b0b9d677929a3a905fe7a52d004120 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_0726 d4b0b9d677929a3a905fe7a52d004120 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_0726 d4b0b9d677929a3a905fe7a52d004120 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_0726 d4b0b9d677929a3a905fe7a52d004120 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_0726 d4b0b9d677929a3a905fe7a52d004120 529 Gene3D G3DSA:3.30.70.3280 390 529 7.3E-53 T 15-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily XDD1_0726 d4b0b9d677929a3a905fe7a52d004120 529 Gene3D G3DSA:3.40.50.300 110 275 2.8E-116 T 15-10-2018 XDD1_0726 d4b0b9d677929a3a905fe7a52d004120 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 153 7.6E-19 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XDD1_0726 d4b0b9d677929a3a905fe7a52d004120 529 SUPERFAMILY SSF50447 262 393 1.39E-27 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XDD1_0726 d4b0b9d677929a3a905fe7a52d004120 529 Gene3D G3DSA:3.40.50.300 72 379 2.8E-116 T 15-10-2018 XDD1_0726 d4b0b9d677929a3a905fe7a52d004120 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.468 T 15-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 XDD1_0726 d4b0b9d677929a3a905fe7a52d004120 529 SUPERFAMILY SSF52540 10 277 2.56E-86 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0726 d4b0b9d677929a3a905fe7a52d004120 529 SUPERFAMILY SSF54980 393 468 4.32E-17 T 15-10-2018 IPR035647 EF-G domain III/V-like XDD1_0726 d4b0b9d677929a3a905fe7a52d004120 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site XDD1_0786 014b8db97afc97822cea5d00d50dc6bb 177 SUPERFAMILY SSF52972 1 169 1.83E-57 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XDD1_0786 014b8db97afc97822cea5d00d50dc6bb 177 Gene3D G3DSA:3.90.950.10 1 176 3.7E-61 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XDD1_0786 014b8db97afc97822cea5d00d50dc6bb 177 Pfam PF01931 Protein of unknown function DUF84 7 165 4.2E-53 T 15-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 XDD1_0786 014b8db97afc97822cea5d00d50dc6bb 177 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 170 3.7E-48 T 15-10-2018 IPR002786 Non-canonical purine NTP phosphatase XDD1_0786 014b8db97afc97822cea5d00d50dc6bb 177 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 28.538 T 15-10-2018 IPR002786 Non-canonical purine NTP phosphatase XDD1_2253 2dbd69af79bdfd5d807169f8df4f940e 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 12 135 6.3E-59 T 15-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 XDD1_2253 2dbd69af79bdfd5d807169f8df4f940e 137 Pfam PF01641 SelR domain 12 127 1.6E-51 T 15-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 XDD1_2253 2dbd69af79bdfd5d807169f8df4f940e 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 2 129 36.569 T 15-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 XDD1_2253 2dbd69af79bdfd5d807169f8df4f940e 137 Gene3D G3DSA:2.170.150.20 3 137 2.9E-58 T 15-10-2018 XDD1_2253 2dbd69af79bdfd5d807169f8df4f940e 137 SUPERFAMILY SSF51316 11 133 9.42E-56 T 15-10-2018 IPR011057 Mss4-like superfamily XDD1_0288 6c0cc79eecec776af385a8edc95c8645 63 Gene3D G3DSA:1.10.287.310 1 63 3.3E-30 T 15-10-2018 XDD1_0288 6c0cc79eecec776af385a8edc95c8645 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.624 T 15-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0288 6c0cc79eecec776af385a8edc95c8645 63 Pfam PF00831 Ribosomal L29 protein 4 60 8.3E-23 T 15-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0288 6c0cc79eecec776af385a8edc95c8645 63 SUPERFAMILY SSF46561 1 61 9.29E-22 T 15-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0288 6c0cc79eecec776af385a8edc95c8645 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 15-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0288 6c0cc79eecec776af385a8edc95c8645 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 2.0E-22 T 15-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_3803 dbb66b9791a801873564e9febd63881b 207 SUPERFAMILY SSF52540 3 189 4.27E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3803 dbb66b9791a801873564e9febd63881b 207 Pfam PF00625 Guanylate kinase 5 185 1.2E-66 T 15-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit XDD1_3803 dbb66b9791a801873564e9febd63881b 207 Gene3D G3DSA:3.30.63.10 37 96 4.6E-75 T 15-10-2018 XDD1_3803 dbb66b9791a801873564e9febd63881b 207 Gene3D G3DSA:3.40.50.300 8 183 4.6E-75 T 15-10-2018 XDD1_3803 dbb66b9791a801873564e9febd63881b 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 1.3E-76 T 15-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 XDD1_3803 dbb66b9791a801873564e9febd63881b 207 SMART SM00072 3 187 4.5E-82 T 15-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit XDD1_3803 dbb66b9791a801873564e9febd63881b 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.15 T 15-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 XDD1_3803 dbb66b9791a801873564e9febd63881b 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 15-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 XDD1_2154 b4b2116006e550543bc5b73b2cd91ad8 443 Pfam PF00202 Aminotransferase class-III 29 438 1.3E-85 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_2154 b4b2116006e550543bc5b73b2cd91ad8 443 SUPERFAMILY SSF53383 14 441 9.58E-116 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_2154 b4b2116006e550543bc5b73b2cd91ad8 443 Gene3D G3DSA:3.40.640.10 64 346 3.4E-154 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_2154 b4b2116006e550543bc5b73b2cd91ad8 443 Gene3D G3DSA:3.90.1150.10 28 435 3.4E-154 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_2154 b4b2116006e550543bc5b73b2cd91ad8 443 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 251 288 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_2154 b4b2116006e550543bc5b73b2cd91ad8 443 PIRSF PIRSF000521 198 442 6.4E-19 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_2154 b4b2116006e550543bc5b73b2cd91ad8 443 PIRSF PIRSF000521 28 144 1.8E-5 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_0317 7bf1c040f18f5dc3af77164531ba2626 274 Gene3D G3DSA:3.40.50.720 102 246 3.1E-82 T 15-10-2018 XDD1_0317 7bf1c040f18f5dc3af77164531ba2626 274 SUPERFAMILY SSF53223 1 101 8.06E-32 T 15-10-2018 XDD1_0317 7bf1c040f18f5dc3af77164531ba2626 274 Gene3D G3DSA:3.40.50.10860 5 256 3.1E-82 T 15-10-2018 XDD1_0317 7bf1c040f18f5dc3af77164531ba2626 274 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 271 32.31 T 15-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 XDD1_0317 7bf1c040f18f5dc3af77164531ba2626 274 SUPERFAMILY SSF51735 102 271 2.59E-40 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0317 7bf1c040f18f5dc3af77164531ba2626 274 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 272 1.5E-94 T 15-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 XDD1_0317 7bf1c040f18f5dc3af77164531ba2626 274 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 117 192 1.4E-12 T 15-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase XDD1_0317 7bf1c040f18f5dc3af77164531ba2626 274 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 2.4E-25 T 15-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 758 793 3.9E-12 T 15-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 824 863 2.6E-19 T 15-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 633 2.2E-251 T 15-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 SUPERFAMILY SSF57783 703 743 9.01E-7 T 15-10-2018 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 SMART SM00493 3 132 3.0E-29 T 15-10-2018 IPR006171 TOPRIM domain XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 Gene3D G3DSA:3.40.50.140 1 163 7.2E-68 T 15-10-2018 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 709 744 2.6E-12 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 597 622 1.2E-4 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 Gene3D G3DSA:3.30.65.10 745 807 1.5E-30 T 15-10-2018 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 Gene3D G3DSA:3.30.65.10 700 744 1.5E-5 T 15-10-2018 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 Gene3D G3DSA:2.20.25.10 808 865 7.6E-28 T 15-10-2018 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 Gene3D G3DSA:1.10.460.10 165 571 3.0E-165 T 15-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 SUPERFAMILY SSF57783 745 807 9.18E-19 T 15-10-2018 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 Gene3D G3DSA:2.70.20.10 213 473 3.0E-165 T 15-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 SUPERFAMILY SSF57783 809 865 1.87E-21 T 15-10-2018 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 SUPERFAMILY SSF56712 3 609 9.03E-203 T 15-10-2018 IPR023405 DNA topoisomerase, type IA, core domain XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 309 323 - T 15-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 Pfam PF01751 Toprim domain 5 142 6.9E-33 T 15-10-2018 IPR006171 TOPRIM domain XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 Pfam PF01131 DNA topoisomerase 157 565 2.8E-128 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 Gene3D G3DSA:1.10.290.10 280 404 3.0E-165 T 15-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 732 54.153 T 15-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 5.0E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 106 119 5.0E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 490 504 5.0E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 390 406 5.0E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 5.0E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 SMART SM00436 133 221 2.4E-48 T 15-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 XDD1_2207 bffd9dff8fac5c18d9fe3317af4d358c 865 SMART SM00437 272 527 3.7E-120 T 15-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 XDD1_0522 6a474c10fe395de1211f9c64dbce3872 257 SMART SM00062 35 254 1.1E-77 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XDD1_0522 6a474c10fe395de1211f9c64dbce3872 257 SUPERFAMILY SSF53850 1 255 1.12E-71 T 15-10-2018 XDD1_0522 6a474c10fe395de1211f9c64dbce3872 257 Gene3D G3DSA:3.40.190.10 118 215 6.7E-74 T 15-10-2018 XDD1_0522 6a474c10fe395de1211f9c64dbce3872 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 253 8.2E-67 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XDD1_0522 6a474c10fe395de1211f9c64dbce3872 257 Gene3D G3DSA:3.40.190.10 34 246 6.7E-74 T 15-10-2018 XDD1_3150 503b00358bd446a594db94717e6ce74e 175 Gene3D G3DSA:3.30.420.470 3 168 3.1E-12 T 15-10-2018 XDD1_3150 503b00358bd446a594db94717e6ce74e 175 SUPERFAMILY SSF53098 48 148 2.12E-8 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3150 503b00358bd446a594db94717e6ce74e 175 Pfam PF13358 DDE superfamily endonuclease 3 139 4.2E-34 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_3570 e16e2f00fc94a684b642af34a457f389 153 SUPERFAMILY SSF46689 14 114 1.56E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3570 e16e2f00fc94a684b642af34a457f389 153 Pfam PF13384 Homeodomain-like domain 26 73 9.9E-11 T 15-10-2018 XDD1_3849 6193098c58e1c33c7607fcfdab42fe92 247 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 114 1.7E-15 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 XDD1_3849 6193098c58e1c33c7607fcfdab42fe92 247 SUPERFAMILY SSF161098 22 212 7.85E-40 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_3849 6193098c58e1c33c7607fcfdab42fe92 247 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 223 2.3E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_3849 6193098c58e1c33c7607fcfdab42fe92 247 Gene3D G3DSA:1.10.3720.10 21 225 7.4E-43 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_3973 785f7a55b5ee644e7946d795f7b77f25 86 SMART SM01234 8 75 1.9E-43 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XDD1_3973 785f7a55b5ee644e7946d795f7b77f25 86 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.514 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XDD1_3973 785f7a55b5ee644e7946d795f7b77f25 86 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 82 6.9E-34 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XDD1_3973 785f7a55b5ee644e7946d795f7b77f25 86 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 68 6.0E-21 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XDD1_3973 785f7a55b5ee644e7946d795f7b77f25 86 Pfam PF01809 Haemolytic domain 10 75 1.5E-29 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XDD1_1710 3270c4d7af6bfb7f7b8e58bc8e790d8c 168 Gene3D G3DSA:3.50.100.10 57 157 9.2E-59 T 15-10-2018 XDD1_1710 3270c4d7af6bfb7f7b8e58bc8e790d8c 168 Gene3D G3DSA:3.10.20.10 4 165 9.2E-59 T 15-10-2018 XDD1_1710 3270c4d7af6bfb7f7b8e58bc8e790d8c 168 Pfam PF07566 Domain of Unknown Function (DUF1543) 16 66 9.3E-18 T 15-10-2018 IPR011440 Domain of unknown function DUF1543 XDD1_1710 3270c4d7af6bfb7f7b8e58bc8e790d8c 168 Pfam PF07566 Domain of Unknown Function (DUF1543) 90 146 1.7E-13 T 15-10-2018 IPR011440 Domain of unknown function DUF1543 XDD1_2437 b3660b17edd731b3a19cae0483d1326f 209 PRINTS PR01398 Isochorismatase signature 110 132 6.5E-35 T 15-10-2018 IPR016291 Isochorismatase GO:0008908 XDD1_2437 b3660b17edd731b3a19cae0483d1326f 209 PRINTS PR01398 Isochorismatase signature 61 78 6.5E-35 T 15-10-2018 IPR016291 Isochorismatase GO:0008908 XDD1_2437 b3660b17edd731b3a19cae0483d1326f 209 PRINTS PR01398 Isochorismatase signature 184 201 6.5E-35 T 15-10-2018 IPR016291 Isochorismatase GO:0008908 XDD1_2437 b3660b17edd731b3a19cae0483d1326f 209 PRINTS PR01398 Isochorismatase signature 78 97 6.5E-35 T 15-10-2018 IPR016291 Isochorismatase GO:0008908 XDD1_2437 b3660b17edd731b3a19cae0483d1326f 209 PRINTS PR01398 Isochorismatase signature 166 184 6.5E-35 T 15-10-2018 IPR016291 Isochorismatase GO:0008908 XDD1_2437 b3660b17edd731b3a19cae0483d1326f 209 SUPERFAMILY SSF52499 3 208 1.83E-56 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 XDD1_2437 b3660b17edd731b3a19cae0483d1326f 209 Pfam PF00857 Isochorismatase family 30 203 5.9E-38 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 XDD1_2437 b3660b17edd731b3a19cae0483d1326f 209 Gene3D G3DSA:3.40.50.850 1 206 1.1E-70 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 XDD1_1259 e70a6f4a553e3868e3e0c74a07724393 161 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 11 152 38.168 T 15-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 XDD1_1259 e70a6f4a553e3868e3e0c74a07724393 161 SUPERFAMILY SSF53155 1 77 1.96E-14 T 15-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 XDD1_1259 e70a6f4a553e3868e3e0c74a07724393 161 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 73 152 2.4E-30 T 15-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 XDD1_1259 e70a6f4a553e3868e3e0c74a07724393 161 SUPERFAMILY SSF46767 71 152 1.44E-30 T 15-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 XDD1_1259 e70a6f4a553e3868e3e0c74a07724393 161 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 122 128 - T 15-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 XDD1_1259 e70a6f4a553e3868e3e0c74a07724393 161 Gene3D G3DSA:1.10.10.10 71 157 1.2E-33 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1259 e70a6f4a553e3868e3e0c74a07724393 161 Gene3D G3DSA:3.30.160.70 1 67 3.0E-9 T 15-10-2018 XDD1_1259 e70a6f4a553e3868e3e0c74a07724393 161 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 72 151 1.1E-32 T 15-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 XDD1_0157 19cd936d976f64bf70bbd2dcc11cea21 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 134 154 2.0E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XDD1_0157 19cd936d976f64bf70bbd2dcc11cea21 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 175 199 2.0E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XDD1_0157 19cd936d976f64bf70bbd2dcc11cea21 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 8 25 2.0E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XDD1_0157 19cd936d976f64bf70bbd2dcc11cea21 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 200 224 2.0E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XDD1_0157 19cd936d976f64bf70bbd2dcc11cea21 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 240 257 2.0E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XDD1_0157 19cd936d976f64bf70bbd2dcc11cea21 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 2.0E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XDD1_0157 19cd936d976f64bf70bbd2dcc11cea21 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 182 321 1.3E-52 T 15-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XDD1_0157 19cd936d976f64bf70bbd2dcc11cea21 339 PIRSF PIRSF000114 1 334 3.0E-100 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XDD1_0157 19cd936d976f64bf70bbd2dcc11cea21 339 Gene3D G3DSA:3.40.50.720 1 189 3.8E-54 T 15-10-2018 XDD1_0157 19cd936d976f64bf70bbd2dcc11cea21 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 4 324 37.634 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XDD1_0157 19cd936d976f64bf70bbd2dcc11cea21 339 SUPERFAMILY SSF51735 6 180 2.52E-51 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0157 19cd936d976f64bf70bbd2dcc11cea21 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 190 211 - T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XDD1_0157 19cd936d976f64bf70bbd2dcc11cea21 339 Gene3D G3DSA:1.10.1040.10 191 337 7.4E-53 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 XDD1_0157 19cd936d976f64bf70bbd2dcc11cea21 339 SUPERFAMILY SSF48179 182 333 1.29E-58 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XDD1_0157 19cd936d976f64bf70bbd2dcc11cea21 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 6 160 2.7E-49 T 15-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XDD1_2896 5e0ea18ef1cae06d26677e2834f99966 150 Gene3D G3DSA:3.40.630.30 9 136 1.8E-33 T 15-10-2018 XDD1_2896 5e0ea18ef1cae06d26677e2834f99966 150 SUPERFAMILY SSF55729 22 131 6.8E-18 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_2896 5e0ea18ef1cae06d26677e2834f99966 150 Pfam PF13508 Acetyltransferase (GNAT) domain 50 129 8.8E-10 T 15-10-2018 IPR000182 GNAT domain XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Gene3D G3DSA:3.40.47.10 9 465 1.9E-148 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 SUPERFAMILY SSF53901 584 1002 6.36E-76 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Gene3D G3DSA:1.10.1200.10 1978 2048 2.1E-15 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Gene3D G3DSA:1.10.1200.10 478 550 1.0E-8 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 SMART SM00823 Phosphopantetheine attachment site 1977 2046 5.9E-8 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 SUPERFAMILY SSF47336 1972 2095 3.01E-15 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 SUPERFAMILY SSF53901 9 365 4.83E-75 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Gene3D G3DSA:3.40.50.720 1470 1945 1.4E-67 T 15-10-2018 XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 2242 2258 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 SUPERFAMILY SSF52151 2600 2882 2.54E-65 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Gene3D G3DSA:3.30.70.3290 1025 1437 6.7E-121 T 15-10-2018 XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 SUPERFAMILY SSF51735 1479 1676 2.83E-7 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 SUPERFAMILY SSF47336 480 599 6.67E-10 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Gene3D G3DSA:3.40.47.10 582 1010 3.3E-134 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Gene3D G3DSA:3.40.47.10 2078 2505 3.6E-146 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3013 3028 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 168 184 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Gene3D G3DSA:3.30.70.250 1236 1296 6.7E-121 T 15-10-2018 XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Gene3D G3DSA:3.30.70.250 2728 2788 7.6E-113 T 15-10-2018 XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Gene3D G3DSA:3.30.70.3290 2522 2924 7.6E-113 T 15-10-2018 XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Gene3D G3DSA:3.40.366.10 2600 2898 7.6E-113 T 15-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Pfam PF00550 Phosphopantetheine attachment site 483 547 2.5E-7 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Pfam PF00550 Phosphopantetheine attachment site 1979 2042 1.4E-10 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Pfam PF00550 Phosphopantetheine attachment site 2991 3049 3.6E-5 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 SUPERFAMILY SSF52151 1106 1402 2.35E-66 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1700 1898 1.7E-21 T 15-10-2018 XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 SMART SM00825 Beta-ketoacyl synthase 10 431 1.0E-144 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 SMART SM00825 Beta-ketoacyl synthase 2083 2506 9.0E-137 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 SMART SM00825 Beta-ketoacyl synthase 588 1012 3.8E-124 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 SUPERFAMILY SSF47336 2985 3053 1.31E-8 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 SUPERFAMILY SSF51735 1699 1943 1.05E-23 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 SUPERFAMILY SSF55048 1235 1296 2.88E-8 T 15-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Pfam PF08659 KR domain 1700 1895 3.7E-36 T 15-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Gene3D G3DSA:1.10.1200.10 2990 3063 8.4E-10 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 SUPERFAMILY SSF53901 2080 2452 6.59E-76 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Pfam PF00698 Acyl transferase domain 2602 2870 1.3E-46 T 15-10-2018 IPR014043 Acyl transferase XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Pfam PF00698 Acyl transferase domain 1107 1399 2.3E-44 T 15-10-2018 IPR014043 Acyl transferase XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 586 834 8.6E-62 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 9 255 1.8E-64 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2081 2329 2.8E-63 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 2604 2892 1.4E-76 T 15-10-2018 IPR020801 Polyketide synthase, acyl transferase domain XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1109 1406 6.6E-78 T 15-10-2018 IPR020801 Polyketide synthase, acyl transferase domain XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2456 2562 1.1E-12 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 968 1072 1.7E-11 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Gene3D G3DSA:3.40.366.10 1105 1407 6.7E-121 T 15-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2337 2453 1.5E-39 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 263 378 2.4E-37 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 842 960 3.8E-38 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal XDD1_1796 1ea776fb933918b8794a4b8fb879cc76 3416 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 747 763 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site XDD1_0886 3d99676ab075c38aa531d4908e9f76d2 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 48 2.5E-18 T 15-10-2018 XDD1_0886 3d99676ab075c38aa531d4908e9f76d2 156 SUPERFAMILY SSF54909 62 151 2.68E-20 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel XDD1_0886 3d99676ab075c38aa531d4908e9f76d2 156 Gene3D G3DSA:1.10.10.10 3 54 1.0E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0886 3d99676ab075c38aa531d4908e9f76d2 156 Gene3D G3DSA:3.30.70.920 55 139 1.5E-21 T 15-10-2018 XDD1_0886 3d99676ab075c38aa531d4908e9f76d2 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 2.5E-11 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 XDD1_0886 3d99676ab075c38aa531d4908e9f76d2 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 2.5E-11 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 XDD1_0886 3d99676ab075c38aa531d4908e9f76d2 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 2.5E-11 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 XDD1_0886 3d99676ab075c38aa531d4908e9f76d2 156 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 8.5E-21 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain XDD1_0886 3d99676ab075c38aa531d4908e9f76d2 156 SMART SM00344 2 111 4.5E-41 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 XDD1_0886 3d99676ab075c38aa531d4908e9f76d2 156 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 15-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site XDD1_0886 3d99676ab075c38aa531d4908e9f76d2 156 SUPERFAMILY SSF46785 2 92 3.11E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_2212 f5e7e0cc2c6c160b71474ca1749a9224 307 SUPERFAMILY SSF55174 8 102 1.62E-11 T 15-10-2018 XDD1_2212 f5e7e0cc2c6c160b71474ca1749a9224 307 Pfam PF01479 S4 domain 7 46 2.2E-10 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_2212 f5e7e0cc2c6c160b71474ca1749a9224 307 Pfam PF00849 RNA pseudouridylate synthase 72 202 4.2E-16 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_2212 f5e7e0cc2c6c160b71474ca1749a9224 307 Gene3D G3DSA:3.10.290.10 2 64 5.3E-20 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XDD1_2212 f5e7e0cc2c6c160b71474ca1749a9224 307 Gene3D G3DSA:3.30.70.580 74 232 3.2E-52 T 15-10-2018 XDD1_2212 f5e7e0cc2c6c160b71474ca1749a9224 307 SMART SM00363 6 77 1.3E-7 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_2212 f5e7e0cc2c6c160b71474ca1749a9224 307 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 76 235 1.2E-61 T 15-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 XDD1_2212 f5e7e0cc2c6c160b71474ca1749a9224 307 Gene3D G3DSA:3.30.70.1560 134 224 3.2E-52 T 15-10-2018 XDD1_2212 f5e7e0cc2c6c160b71474ca1749a9224 307 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 110 124 - T 15-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 XDD1_2212 f5e7e0cc2c6c160b71474ca1749a9224 307 SUPERFAMILY SSF55120 72 236 3.04E-43 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_1010 e86623a12daf37d05f470330a1f22c96 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 132 4.9E-20 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XDD1_1010 e86623a12daf37d05f470330a1f22c96 337 Gene3D G3DSA:3.40.50.720 152 277 3.8E-54 T 15-10-2018 XDD1_1010 e86623a12daf37d05f470330a1f22c96 337 Gene3D G3DSA:3.90.180.10 22 298 3.8E-54 T 15-10-2018 XDD1_1010 e86623a12daf37d05f470330a1f22c96 337 SUPERFAMILY SSF51735 144 292 2.56E-18 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1010 e86623a12daf37d05f470330a1f22c96 337 Pfam PF00107 Zinc-binding dehydrogenase 174 289 6.0E-8 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XDD1_1010 e86623a12daf37d05f470330a1f22c96 337 SUPERFAMILY SSF50129 21 173 9.92E-32 T 15-10-2018 IPR011032 GroES-like superfamily XDD1_2796 10bebd5921227bd3fc03c2d6599e0e45 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 XDD1_2796 10bebd5921227bd3fc03c2d6599e0e45 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 XDD1_2796 10bebd5921227bd3fc03c2d6599e0e45 445 SMART SM00448 7 118 2.5E-34 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_2796 10bebd5921227bd3fc03c2d6599e0e45 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site XDD1_2796 10bebd5921227bd3fc03c2d6599e0e45 445 SUPERFAMILY SSF52540 137 379 3.63E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2796 10bebd5921227bd3fc03c2d6599e0e45 445 Gene3D G3DSA:1.10.10.60 387 441 7.9E-9 T 15-10-2018 XDD1_2796 10bebd5921227bd3fc03c2d6599e0e45 445 Gene3D G3DSA:1.10.8.60 308 386 2.5E-21 T 15-10-2018 XDD1_2796 10bebd5921227bd3fc03c2d6599e0e45 445 Gene3D G3DSA:3.40.50.2300 4 132 5.2E-37 T 15-10-2018 XDD1_2796 10bebd5921227bd3fc03c2d6599e0e45 445 SUPERFAMILY SSF46689 388 438 2.37E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2796 10bebd5921227bd3fc03c2d6599e0e45 445 SUPERFAMILY SSF52172 6 181 5.83E-43 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_2796 10bebd5921227bd3fc03c2d6599e0e45 445 Pfam PF00158 Sigma-54 interaction domain 137 303 6.6E-72 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 XDD1_2796 10bebd5921227bd3fc03c2d6599e0e45 445 Gene3D G3DSA:3.40.50.300 133 307 3.4E-63 T 15-10-2018 XDD1_2796 10bebd5921227bd3fc03c2d6599e0e45 445 SMART SM00382 157 300 3.8E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_2796 10bebd5921227bd3fc03c2d6599e0e45 445 Pfam PF00072 Response regulator receiver domain 10 118 1.8E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_0350 6659851c5a4860151a9b0713eb35b75f 356 SUPERFAMILY SSF51735 2 339 5.0E-95 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0350 6659851c5a4860151a9b0713eb35b75f 356 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 341 3.1E-158 T 15-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 XDD1_0350 6659851c5a4860151a9b0713eb35b75f 356 Gene3D G3DSA:3.40.50.720 3 326 1.1E-137 T 15-10-2018 XDD1_0350 6659851c5a4860151a9b0713eb35b75f 356 Gene3D G3DSA:3.90.25.10 202 334 1.1E-137 T 15-10-2018 XDD1_0350 6659851c5a4860151a9b0713eb35b75f 356 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 8.8E-100 T 15-10-2018 IPR016040 NAD(P)-binding domain XDD1_0578 b402b328b55316d267473f02bfd4c52a 86 SUPERFAMILY SSF89447 5 47 1.78E-6 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily XDD1_0578 b402b328b55316d267473f02bfd4c52a 86 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 54 1.4E-6 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 XDD1_0578 b402b328b55316d267473f02bfd4c52a 86 Gene3D G3DSA:2.10.260.10 2 83 1.1E-20 T 15-10-2018 XDD1_1140 ff6ba96c88472a37204269aac905eb48 314 SUPERFAMILY SSF53807 38 301 4.71E-56 T 15-10-2018 XDD1_1140 ff6ba96c88472a37204269aac905eb48 314 Pfam PF01497 Periplasmic binding protein 68 291 1.2E-22 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain XDD1_1140 ff6ba96c88472a37204269aac905eb48 314 Gene3D G3DSA:3.40.50.12250 43 296 8.8E-75 T 15-10-2018 XDD1_1140 ff6ba96c88472a37204269aac905eb48 314 Gene3D G3DSA:3.40.50.12260 189 288 8.8E-75 T 15-10-2018 XDD1_0699 f019dff832f7df97052d185a53c10ba4 396 Pfam PF00145 C-5 cytosine-specific DNA methylase 1 388 1.0E-67 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 XDD1_0699 f019dff832f7df97052d185a53c10ba4 396 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 77 89 - T 15-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 XDD1_0699 f019dff832f7df97052d185a53c10ba4 396 Gene3D G3DSA:3.40.50.150 1 232 6.4E-58 T 15-10-2018 XDD1_0699 f019dff832f7df97052d185a53c10ba4 396 SUPERFAMILY SSF53335 1 388 2.17E-85 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_0699 f019dff832f7df97052d185a53c10ba4 396 Gene3D G3DSA:3.90.120.10 259 380 2.3E-28 T 15-10-2018 XDD1_0699 f019dff832f7df97052d185a53c10ba4 396 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 369 387 - T 15-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 XDD1_0699 f019dff832f7df97052d185a53c10ba4 396 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 4 386 1.6E-56 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 XDD1_0699 f019dff832f7df97052d185a53c10ba4 396 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 2 18 3.8E-17 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 XDD1_0699 f019dff832f7df97052d185a53c10ba4 396 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 164 177 3.8E-17 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 XDD1_0699 f019dff832f7df97052d185a53c10ba4 396 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 117 131 3.8E-17 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 XDD1_2585 bec53215136f5b6d8a647147c0b7a72f 614 Pfam PF00361 Proton-conducting membrane transporter 136 428 2.0E-95 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2585 bec53215136f5b6d8a647147c0b7a72f 614 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 124 1.3E-23 T 15-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2585 bec53215136f5b6d8a647147c0b7a72f 614 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 611 3.7E-229 T 15-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2585 bec53215136f5b6d8a647147c0b7a72f 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 268 290 2.9E-11 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 XDD1_2585 bec53215136f5b6d8a647147c0b7a72f 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 61 85 2.9E-11 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 XDD1_2585 bec53215136f5b6d8a647147c0b7a72f 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 87 107 2.9E-11 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 XDD1_2585 bec53215136f5b6d8a647147c0b7a72f 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 420 442 2.9E-11 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 XDD1_2585 bec53215136f5b6d8a647147c0b7a72f 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 85 110 7.9E-55 T 15-10-2018 XDD1_2585 bec53215136f5b6d8a647147c0b7a72f 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 7.9E-55 T 15-10-2018 XDD1_2585 bec53215136f5b6d8a647147c0b7a72f 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 421 440 7.9E-55 T 15-10-2018 XDD1_2585 bec53215136f5b6d8a647147c0b7a72f 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 160 181 7.9E-55 T 15-10-2018 XDD1_2585 bec53215136f5b6d8a647147c0b7a72f 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 250 276 7.9E-55 T 15-10-2018 XDD1_2585 bec53215136f5b6d8a647147c0b7a72f 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 7.9E-55 T 15-10-2018 XDD1_2585 bec53215136f5b6d8a647147c0b7a72f 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 113 133 7.9E-55 T 15-10-2018 XDD1_3125 a1e684e4a65badb39dcf27a164022b65 445 SUPERFAMILY SSF53335 76 437 3.94E-82 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_3125 a1e684e4a65badb39dcf27a164022b65 445 Gene3D G3DSA:2.40.50.140 1 87 1.6E-30 T 15-10-2018 XDD1_3125 a1e684e4a65badb39dcf27a164022b65 445 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 422 432 - T 15-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site XDD1_3125 a1e684e4a65badb39dcf27a164022b65 445 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 440 63.874 T 15-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 XDD1_3125 a1e684e4a65badb39dcf27a164022b65 445 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 371 401 - T 15-10-2018 IPR030390 RNA methyltransferase TrmA, active site XDD1_3125 a1e684e4a65badb39dcf27a164022b65 445 Gene3D G3DSA:3.40.1350.30 134 272 2.1E-119 T 15-10-2018 XDD1_3125 a1e684e4a65badb39dcf27a164022b65 445 SUPERFAMILY SSF50249 3 68 6.28E-13 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_3125 a1e684e4a65badb39dcf27a164022b65 445 Gene3D G3DSA:3.40.50.150 88 434 2.1E-119 T 15-10-2018 XDD1_3125 a1e684e4a65badb39dcf27a164022b65 445 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 432 1.3E-135 T 15-10-2018 XDD1_3125 a1e684e4a65badb39dcf27a164022b65 445 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 99 435 4.9E-28 T 15-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 XDD1_3125 a1e684e4a65badb39dcf27a164022b65 445 Pfam PF01938 TRAM domain 18 67 2.0E-8 T 15-10-2018 IPR002792 TRAM domain XDD1_2801 2a560460e2e865824f7945a7349cf278 173 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 17 158 47.796 T 15-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 XDD1_2801 2a560460e2e865824f7945a7349cf278 173 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 62 99 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 XDD1_2801 2a560460e2e865824f7945a7349cf278 173 Gene3D G3DSA:3.40.140.10 6 172 5.4E-67 T 15-10-2018 XDD1_2801 2a560460e2e865824f7945a7349cf278 173 SUPERFAMILY SSF53927 11 162 1.07E-56 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 XDD1_2801 2a560460e2e865824f7945a7349cf278 173 Pfam PF14437 MafB19-like deaminase 13 158 9.6E-32 T 15-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 XDD1_0828 25f68462271b1545e9035355c7c72fe2 586 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 374 398 - T 15-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 XDD1_0828 25f68462271b1545e9035355c7c72fe2 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 245 261 2.4E-77 T 15-10-2018 XDD1_0828 25f68462271b1545e9035355c7c72fe2 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 374 392 2.4E-77 T 15-10-2018 XDD1_0828 25f68462271b1545e9035355c7c72fe2 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 463 480 2.4E-77 T 15-10-2018 XDD1_0828 25f68462271b1545e9035355c7c72fe2 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 398 416 2.4E-77 T 15-10-2018 XDD1_0828 25f68462271b1545e9035355c7c72fe2 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 55 80 2.4E-77 T 15-10-2018 XDD1_0828 25f68462271b1545e9035355c7c72fe2 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 439 454 2.4E-77 T 15-10-2018 XDD1_0828 25f68462271b1545e9035355c7c72fe2 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 128 146 2.4E-77 T 15-10-2018 XDD1_0828 25f68462271b1545e9035355c7c72fe2 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 146 165 2.4E-77 T 15-10-2018 XDD1_0828 25f68462271b1545e9035355c7c72fe2 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 275 294 2.4E-77 T 15-10-2018 XDD1_0828 25f68462271b1545e9035355c7c72fe2 586 SUPERFAMILY SSF56235 25 542 9.26E-185 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XDD1_0828 25f68462271b1545e9035355c7c72fe2 586 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 33 543 3.8E-176 T 15-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 XDD1_0828 25f68462271b1545e9035355c7c72fe2 586 Pfam PF01019 Gamma-glutamyltranspeptidase 48 545 1.5E-181 T 15-10-2018 XDD1_0828 25f68462271b1545e9035355c7c72fe2 586 Gene3D G3DSA:3.60.20.40 374 578 1.4E-67 T 15-10-2018 XDD1_0828 25f68462271b1545e9035355c7c72fe2 586 Gene3D G3DSA:1.10.246.130 261 372 6.2E-42 T 15-10-2018 XDD1_1165 e1ab1bea4ff63da19bb7325f110ffab0 429 Gene3D G3DSA:2.40.37.10 29 424 1.2E-137 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XDD1_1165 e1ab1bea4ff63da19bb7325f110ffab0 429 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 21 428 38.189 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XDD1_1165 e1ab1bea4ff63da19bb7325f110ffab0 429 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 15-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site XDD1_1165 e1ab1bea4ff63da19bb7325f110ffab0 429 Gene3D G3DSA:3.20.20.10 40 286 1.2E-137 T 15-10-2018 IPR029066 PLP-binding barrel XDD1_1165 e1ab1bea4ff63da19bb7325f110ffab0 429 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 189 202 7.5E-20 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XDD1_1165 e1ab1bea4ff63da19bb7325f110ffab0 429 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 7.5E-20 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XDD1_1165 e1ab1bea4ff63da19bb7325f110ffab0 429 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 385 398 7.5E-20 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XDD1_1165 e1ab1bea4ff63da19bb7325f110ffab0 429 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 7.5E-20 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XDD1_1165 e1ab1bea4ff63da19bb7325f110ffab0 429 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 7.5E-20 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XDD1_1165 e1ab1bea4ff63da19bb7325f110ffab0 429 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 53 282 8.3E-56 T 15-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 XDD1_1165 e1ab1bea4ff63da19bb7325f110ffab0 429 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 283 385 8.2E-24 T 15-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 XDD1_1165 e1ab1bea4ff63da19bb7325f110ffab0 429 PRINTS PR01181 Diaminopimelate decarboxylase signature 395 417 5.7E-26 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XDD1_1165 e1ab1bea4ff63da19bb7325f110ffab0 429 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 5.7E-26 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XDD1_1165 e1ab1bea4ff63da19bb7325f110ffab0 429 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 5.7E-26 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XDD1_1165 e1ab1bea4ff63da19bb7325f110ffab0 429 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 5.7E-26 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XDD1_1165 e1ab1bea4ff63da19bb7325f110ffab0 429 SUPERFAMILY SSF51419 32 284 4.88E-54 T 15-10-2018 IPR029066 PLP-binding barrel XDD1_1165 e1ab1bea4ff63da19bb7325f110ffab0 429 SUPERFAMILY SSF50621 257 427 4.81E-54 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XDD1_1165 e1ab1bea4ff63da19bb7325f110ffab0 429 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 22 427 1.2E-123 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XDD1_1165 e1ab1bea4ff63da19bb7325f110ffab0 429 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 223 236 - T 15-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site XDD1_3653 0480ba8d2ceec9b3e60b4471ba713d63 119 Pfam PF02635 DsrE/DsrF-like family 2 119 4.4E-22 T 15-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein XDD1_3653 0480ba8d2ceec9b3e60b4471ba713d63 119 Hamap MF_00389 Protein TusC [tusC]. 1 119 34.246 T 15-10-2018 IPR037450 Sulphur relay, TusC XDD1_3653 0480ba8d2ceec9b3e60b4471ba713d63 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 119 6.1E-45 T 15-10-2018 IPR017462 Sulphur relay, TusC/DsrF XDD1_3653 0480ba8d2ceec9b3e60b4471ba713d63 119 SUPERFAMILY SSF75169 1 119 2.02E-34 T 15-10-2018 IPR027396 DsrEFH-like XDD1_3653 0480ba8d2ceec9b3e60b4471ba713d63 119 Gene3D G3DSA:3.40.1260.10 1 119 2.4E-37 T 15-10-2018 IPR027396 DsrEFH-like XDD1_1046 4de3bfaa406f8b1a172b88e0b3773082 139 Gene3D G3DSA:3.40.630.30 36 136 2.8E-27 T 15-10-2018 XDD1_1046 4de3bfaa406f8b1a172b88e0b3773082 139 Pfam PF00583 Acetyltransferase (GNAT) family 30 114 7.4E-14 T 15-10-2018 IPR000182 GNAT domain XDD1_1046 4de3bfaa406f8b1a172b88e0b3773082 139 SUPERFAMILY SSF55729 30 135 4.51E-25 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_3587 710040fa05c0a5e74832bba395e3b206 450 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 5.6E-163 T 15-10-2018 XDD1_3587 710040fa05c0a5e74832bba395e3b206 450 Gene3D G3DSA:1.20.1250.20 240 448 1.6E-61 T 15-10-2018 XDD1_3587 710040fa05c0a5e74832bba395e3b206 450 Gene3D G3DSA:1.20.1250.20 18 226 5.9E-59 T 15-10-2018 XDD1_3587 710040fa05c0a5e74832bba395e3b206 450 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 3.8E-260 T 15-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 XDD1_3587 710040fa05c0a5e74832bba395e3b206 450 SUPERFAMILY SSF103473 13 442 2.88E-85 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_3587 710040fa05c0a5e74832bba395e3b206 450 Pfam PF07690 Major Facilitator Superfamily 34 400 8.1E-46 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_3587 710040fa05c0a5e74832bba395e3b206 450 PIRSF PIRSF002808 5 450 3.5E-173 T 15-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 XDD1_3587 710040fa05c0a5e74832bba395e3b206 450 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 15-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 XDD1_1291 3ff1a29a996bd448122abd569ec6b03d 155 Gene3D G3DSA:3.40.390.30 1 155 5.9E-61 T 15-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 XDD1_1291 3ff1a29a996bd448122abd569ec6b03d 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 145 4.9E-38 T 15-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 XDD1_1291 3ff1a29a996bd448122abd569ec6b03d 155 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 15-10-2018 IPR020549 Endoribonuclease YbeY, conserved site XDD1_1291 3ff1a29a996bd448122abd569ec6b03d 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 24.987 T 15-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 XDD1_1291 3ff1a29a996bd448122abd569ec6b03d 155 Pfam PF02130 Uncharacterized protein family UPF0054 20 143 4.8E-41 T 15-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 XDD1_1291 3ff1a29a996bd448122abd569ec6b03d 155 SUPERFAMILY SSF55486 3 151 1.66E-50 T 15-10-2018 XDD1_0804 d08247239b28f2684ca0290fb857bc5f 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 414 431 5.6E-14 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 XDD1_0804 d08247239b28f2684ca0290fb857bc5f 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 438 450 5.6E-14 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 XDD1_0804 d08247239b28f2684ca0290fb857bc5f 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 5.6E-14 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 XDD1_0804 d08247239b28f2684ca0290fb857bc5f 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 5.6E-14 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 XDD1_0804 d08247239b28f2684ca0290fb857bc5f 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 5.6E-14 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 XDD1_0804 d08247239b28f2684ca0290fb857bc5f 479 Pfam PF00232 Glycosyl hydrolase family 1 6 473 6.8E-141 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 XDD1_0804 d08247239b28f2684ca0290fb857bc5f 479 Gene3D G3DSA:3.20.20.80 1 475 2.3E-155 T 15-10-2018 XDD1_0804 d08247239b28f2684ca0290fb857bc5f 479 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 12 26 - T 15-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site XDD1_0804 d08247239b28f2684ca0290fb857bc5f 479 SUPERFAMILY SSF51445 7 473 1.15E-154 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily XDD1_3911 eef53946c93399cabc910897220b28ce 371 SUPERFAMILY SSF53383 43 328 1.15E-30 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_3911 eef53946c93399cabc910897220b28ce 371 Pfam PF00266 Aminotransferase class-V 63 235 1.9E-6 T 15-10-2018 IPR000192 Aminotransferase class V domain XDD1_3911 eef53946c93399cabc910897220b28ce 371 Gene3D G3DSA:3.40.640.10 11 256 5.2E-60 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_3911 eef53946c93399cabc910897220b28ce 371 Gene3D G3DSA:3.90.1150.130 257 369 2.2E-51 T 15-10-2018 XDD1_3802 2005e17551be8e02d5aa6d7f320c3b63 552 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 338 412 1.5E-17 T 15-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 XDD1_3802 2005e17551be8e02d5aa6d7f320c3b63 552 SUPERFAMILY SSF50249 335 414 3.26E-17 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_3802 2005e17551be8e02d5aa6d7f320c3b63 552 Gene3D G3DSA:2.40.50.140 334 406 1.5E-13 T 15-10-2018 XDD1_3802 2005e17551be8e02d5aa6d7f320c3b63 552 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 36 332 9.2E-22 T 15-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 XDD1_3802 2005e17551be8e02d5aa6d7f320c3b63 552 SMART SM00532 36 460 7.8E-38 T 15-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 XDD1_3802 2005e17551be8e02d5aa6d7f320c3b63 552 Gene3D G3DSA:3.30.470.90 116 333 5.5E-29 T 15-10-2018 XDD1_3802 2005e17551be8e02d5aa6d7f320c3b63 552 Hamap MF_01587 DNA ligase B [ligB]. 4 552 47.161 T 15-10-2018 IPR020923 DNA ligase B GO:0003911|GO:0006259 XDD1_3802 2005e17551be8e02d5aa6d7f320c3b63 552 SUPERFAMILY SSF56091 32 332 1.92E-59 T 15-10-2018 XDD1_3802 2005e17551be8e02d5aa6d7f320c3b63 552 SUPERFAMILY SSF47781 414 535 2.72E-14 T 15-10-2018 IPR010994 RuvA domain 2-like XDD1_3386 405dd7283a3a6ee128b4eedbee175e57 789 Pfam PF04453 Organic solvent tolerance protein 309 704 1.2E-101 T 15-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 XDD1_3386 405dd7283a3a6ee128b4eedbee175e57 789 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 768 20.307 T 15-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 XDD1_3386 405dd7283a3a6ee128b4eedbee175e57 789 Pfam PF03968 OstA-like protein 52 190 3.6E-23 T 15-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal XDD1_3386 405dd7283a3a6ee128b4eedbee175e57 789 Gene3D G3DSA:2.60.450.10 44 140 5.7E-7 T 15-10-2018 XDD1_1639 e6e6db9f272411651bc931b523837ca2 126 Gene3D G3DSA:1.10.10.370 56 126 1.1E-33 T 15-10-2018 XDD1_1639 e6e6db9f272411651bc931b523837ca2 126 SUPERFAMILY SSF69721 17 126 2.75E-42 T 15-10-2018 IPR025526 DsrC-like domain superfamily XDD1_1639 e6e6db9f272411651bc931b523837ca2 126 PIRSF PIRSF006223 19 126 1.8E-46 T 15-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE XDD1_1639 e6e6db9f272411651bc931b523837ca2 126 Gene3D G3DSA:3.30.1420.10 18 54 8.2E-11 T 15-10-2018 XDD1_1639 e6e6db9f272411651bc931b523837ca2 126 Pfam PF04358 DsrC like protein 21 126 1.1E-46 T 15-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE XDD1_1639 e6e6db9f272411651bc931b523837ca2 126 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 21 126 7.3E-51 T 15-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE XDD1_1329 8ded54dc365031860cbf99e8be39e1d2 563 Pfam PF03814 Potassium-transporting ATPase A subunit 12 561 1.9E-235 T 15-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 XDD1_1329 8ded54dc365031860cbf99e8be39e1d2 563 PIRSF PIRSF001294 1 563 7.6E-235 T 15-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 XDD1_1329 8ded54dc365031860cbf99e8be39e1d2 563 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 562 2.2E-242 T 15-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 XDD1_1329 8ded54dc365031860cbf99e8be39e1d2 563 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 563 34.617 T 15-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 XDD1_1395 96fbe3fd24e1a2dae906a6ac2936e44e 179 Pfam PF11072 Protein of unknown function (DUF2859) 32 172 8.6E-52 T 15-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 XDD1_1395 96fbe3fd24e1a2dae906a6ac2936e44e 179 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 71 175 2.1E-40 T 15-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 XDD1_2247 8fcd0030b1762ba518716e474631b0b5 648 SMART SM00436 128 223 3.0E-36 T 15-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 XDD1_2247 8fcd0030b1762ba518716e474631b0b5 648 Gene3D G3DSA:3.40.50.140 1 156 1.2E-62 T 15-10-2018 XDD1_2247 8fcd0030b1762ba518716e474631b0b5 648 SUPERFAMILY SSF56712 1 607 1.31E-185 T 15-10-2018 IPR023405 DNA topoisomerase, type IA, core domain XDD1_2247 8fcd0030b1762ba518716e474631b0b5 648 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 15-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 XDD1_2247 8fcd0030b1762ba518716e474631b0b5 648 Pfam PF01131 DNA topoisomerase 158 592 5.1E-112 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_2247 8fcd0030b1762ba518716e474631b0b5 648 Pfam PF01751 Toprim domain 3 135 2.9E-17 T 15-10-2018 IPR006171 TOPRIM domain XDD1_2247 8fcd0030b1762ba518716e474631b0b5 648 Gene3D G3DSA:1.10.460.10 162 602 1.9E-175 T 15-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 XDD1_2247 8fcd0030b1762ba518716e474631b0b5 648 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 642 4.6E-277 T 15-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 XDD1_2247 8fcd0030b1762ba518716e474631b0b5 648 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 645 65.755 T 15-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 XDD1_2247 8fcd0030b1762ba518716e474631b0b5 648 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 1.5E-25 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_2247 8fcd0030b1762ba518716e474631b0b5 648 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 1.5E-25 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_2247 8fcd0030b1762ba518716e474631b0b5 648 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 1.5E-25 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_2247 8fcd0030b1762ba518716e474631b0b5 648 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 1.5E-25 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_2247 8fcd0030b1762ba518716e474631b0b5 648 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 1.5E-25 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XDD1_2247 8fcd0030b1762ba518716e474631b0b5 648 Gene3D G3DSA:2.70.20.10 217 488 1.9E-175 T 15-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 XDD1_2247 8fcd0030b1762ba518716e474631b0b5 648 SMART SM00493 1 124 6.4E-28 T 15-10-2018 IPR006171 TOPRIM domain XDD1_2247 8fcd0030b1762ba518716e474631b0b5 648 SMART SM00437 280 558 6.3E-99 T 15-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 XDD1_2247 8fcd0030b1762ba518716e474631b0b5 648 Gene3D G3DSA:1.10.290.10 289 416 1.9E-175 T 15-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 XDD1_3303 6b16f4d11a5ddac7c3f824c1bea19787 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 28.185 T 15-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 XDD1_3303 6b16f4d11a5ddac7c3f824c1bea19787 185 Gene3D G3DSA:1.10.132.20 101 185 8.9E-29 T 15-10-2018 XDD1_3303 6b16f4d11a5ddac7c3f824c1bea19787 185 SUPERFAMILY SSF55194 2 184 7.59E-73 T 15-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 XDD1_3303 6b16f4d11a5ddac7c3f824c1bea19787 185 Gene3D G3DSA:1.10.132.20 1 35 2.2E-9 T 15-10-2018 XDD1_3303 6b16f4d11a5ddac7c3f824c1bea19787 185 Pfam PF01765 Ribosome recycling factor 20 183 3.6E-64 T 15-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 XDD1_3303 6b16f4d11a5ddac7c3f824c1bea19787 185 Gene3D G3DSA:3.30.1360.40 36 100 5.7E-31 T 15-10-2018 XDD1_3303 6b16f4d11a5ddac7c3f824c1bea19787 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 4.5E-80 T 15-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 XDD1_1967 0529c650ad630978c05dc2f625d3b98f 258 Gene3D G3DSA:3.20.20.60 1 256 2.3E-80 T 15-10-2018 XDD1_1967 0529c650ad630978c05dc2f625d3b98f 258 SUPERFAMILY SSF51621 1 251 3.77E-72 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XDD1_1967 0529c650ad630978c05dc2f625d3b98f 258 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 19 210 8.9E-38 T 15-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 XDD1_1533 7c4e844318dff3241acbd2b8e3e04ce3 435 TIGRFAM TIGR00814 stp: serine transporter 22 425 3.3E-171 T 15-10-2018 IPR004694 Hydroxy amino acid transporter GO:0006865|GO:0015171|GO:0016021 XDD1_1533 7c4e844318dff3241acbd2b8e3e04ce3 435 Pfam PF03222 Tryptophan/tyrosine permease family 34 428 9.7E-13 T 15-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 XDD1_3199 19a0cb09969e3e39a915b65268cd160b 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 15-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 XDD1_3199 19a0cb09969e3e39a915b65268cd160b 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 17 250 3.0E-106 T 15-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 XDD1_3199 19a0cb09969e3e39a915b65268cd160b 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.649 T 15-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 XDD1_3199 19a0cb09969e3e39a915b65268cd160b 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 1.6E-88 T 15-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 XDD1_3199 19a0cb09969e3e39a915b65268cd160b 251 SUPERFAMILY SSF53335 18 248 2.17E-53 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_3199 19a0cb09969e3e39a915b65268cd160b 251 Gene3D G3DSA:3.40.50.150 31 251 1.9E-76 T 15-10-2018 XDD1_3199 19a0cb09969e3e39a915b65268cd160b 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 15-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 XDD1_1541 7449a572cd8d64b7fd5e02e89f7dab20 238 Gene3D G3DSA:1.10.3720.10 1 232 1.9E-47 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_1541 7449a572cd8d64b7fd5e02e89f7dab20 238 SUPERFAMILY SSF161098 7 216 1.26E-37 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_1541 7449a572cd8d64b7fd5e02e89f7dab20 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 14 230 2.9E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_1541 7449a572cd8d64b7fd5e02e89f7dab20 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 4 79 2.2E-12 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 XDD1_3400 7d275c3c217daa7e86257750256e3f7c 213 Gene3D G3DSA:3.90.79.10 3 209 1.5E-64 T 15-10-2018 XDD1_3400 7d275c3c217daa7e86257750256e3f7c 213 Pfam PF00293 NUDIX domain 59 176 2.9E-12 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XDD1_3400 7d275c3c217daa7e86257750256e3f7c 213 SUPERFAMILY SSF55811 8 206 6.63E-48 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XDD1_3400 7d275c3c217daa7e86257750256e3f7c 213 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 199 3.5E-68 T 15-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 XDD1_3400 7d275c3c217daa7e86257750256e3f7c 213 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XDD1_2341 e0543caa4fe5be833b5676c7707dce55 99 SUPERFAMILY SSF101498 1 89 1.16E-12 T 15-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily XDD1_2341 e0543caa4fe5be833b5676c7707dce55 99 Pfam PF04316 Anti-sigma-28 factor, FlgM 41 87 8.3E-10 T 15-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal XDD1_2341 e0543caa4fe5be833b5676c7707dce55 99 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 90 9.6E-18 T 15-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 XDD1_3284 6509ca5e765ea99e8a24c79822d03668 573 SUPERFAMILY SSF55681 10 478 2.39E-106 T 15-10-2018 XDD1_3284 6509ca5e765ea99e8a24c79822d03668 573 Pfam PF04073 Aminoacyl-tRNA editing domain 257 377 2.3E-24 T 15-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 XDD1_3284 6509ca5e765ea99e8a24c79822d03668 573 Gene3D G3DSA:3.40.50.800 4 554 5.3E-240 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily XDD1_3284 6509ca5e765ea99e8a24c79822d03668 573 Gene3D G3DSA:3.30.930.10 11 465 5.3E-240 T 15-10-2018 XDD1_3284 6509ca5e765ea99e8a24c79822d03668 573 SUPERFAMILY SSF52954 462 570 4.08E-34 T 15-10-2018 XDD1_3284 6509ca5e765ea99e8a24c79822d03668 573 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 42.693 T 15-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 XDD1_3284 6509ca5e765ea99e8a24c79822d03668 573 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 564 5.5E-270 T 15-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 XDD1_3284 6509ca5e765ea99e8a24c79822d03668 573 PIRSF PIRSF001535 1 573 7.1E-273 T 15-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 XDD1_3284 6509ca5e765ea99e8a24c79822d03668 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.3E-19 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 XDD1_3284 6509ca5e765ea99e8a24c79822d03668 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.3E-19 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 XDD1_3284 6509ca5e765ea99e8a24c79822d03668 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.3E-19 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 XDD1_3284 6509ca5e765ea99e8a24c79822d03668 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.3E-19 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 XDD1_3284 6509ca5e765ea99e8a24c79822d03668 573 SUPERFAMILY SSF55826 218 390 2.49E-31 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 XDD1_3284 6509ca5e765ea99e8a24c79822d03668 573 Pfam PF03129 Anticodon binding domain 475 567 8.0E-22 T 15-10-2018 IPR004154 Anticodon-binding XDD1_3284 6509ca5e765ea99e8a24c79822d03668 573 Gene3D G3DSA:3.90.960.10 240 389 5.3E-240 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 XDD1_3284 6509ca5e765ea99e8a24c79822d03668 573 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 1.5E-50 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_3628 1d067308e000513cee5a00a6d02fec1d 417 PIRSF PIRSF000521 12 148 7.0E-5 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_3628 1d067308e000513cee5a00a6d02fec1d 417 PIRSF PIRSF000521 113 404 3.4E-44 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_3628 1d067308e000513cee5a00a6d02fec1d 417 Gene3D G3DSA:3.90.1150.10 21 395 9.6E-95 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_3628 1d067308e000513cee5a00a6d02fec1d 417 Pfam PF00202 Aminotransferase class-III 23 398 1.5E-79 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_3628 1d067308e000513cee5a00a6d02fec1d 417 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 221 259 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_3628 1d067308e000513cee5a00a6d02fec1d 417 SUPERFAMILY SSF53383 23 403 9.39E-90 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_3628 1d067308e000513cee5a00a6d02fec1d 417 Gene3D G3DSA:3.40.640.10 44 305 9.6E-95 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_1571 1df1f17493b67e292483d99aea20b4d7 436 SUPERFAMILY SSF55205 1 431 4.71E-142 T 15-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 XDD1_1571 1df1f17493b67e292483d99aea20b4d7 436 ProSitePatterns PS00885 EPSP synthase signature 2. 346 364 - T 15-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XDD1_1571 1df1f17493b67e292483d99aea20b4d7 436 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 432 4.5E-141 T 15-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XDD1_1571 1df1f17493b67e292483d99aea20b4d7 436 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 15-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XDD1_1571 1df1f17493b67e292483d99aea20b4d7 436 PIRSF PIRSF000505 1 436 2.0E-154 T 15-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XDD1_1571 1df1f17493b67e292483d99aea20b4d7 436 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 428 7.1E-152 T 15-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 XDD1_1571 1df1f17493b67e292483d99aea20b4d7 436 Gene3D G3DSA:3.65.10.10 249 428 5.0E-157 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 XDD1_1571 1df1f17493b67e292483d99aea20b4d7 436 Gene3D G3DSA:3.65.10.10 20 231 5.0E-157 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 XDD1_1571 1df1f17493b67e292483d99aea20b4d7 436 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 434 35.321 T 15-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XDD1_1326 ff94ed8ace75de2ce90014386ff35d50 738 Gene3D G3DSA:3.30.450.40 517 662 1.1E-33 T 15-10-2018 IPR029016 GAF-like domain superfamily XDD1_1326 ff94ed8ace75de2ce90014386ff35d50 738 Pfam PF13493 Domain of unknown function (DUF4118) 408 512 4.3E-27 T 15-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain XDD1_1326 ff94ed8ace75de2ce90014386ff35d50 738 SUPERFAMILY SSF55781 514 665 8.41E-11 T 15-10-2018 XDD1_1326 ff94ed8ace75de2ce90014386ff35d50 738 Gene3D G3DSA:3.40.50.300 20 230 4.9E-98 T 15-10-2018 XDD1_1326 ff94ed8ace75de2ce90014386ff35d50 738 Gene3D G3DSA:1.20.120.620 401 507 2.4E-34 T 15-10-2018 IPR038318 KdpD, transmembrane domain superfamily XDD1_1326 ff94ed8ace75de2ce90014386ff35d50 738 Gene3D G3DSA:1.10.287.130 663 732 9.6E-10 T 15-10-2018 XDD1_1326 ff94ed8ace75de2ce90014386ff35d50 738 SUPERFAMILY SSF52402 252 347 2.43E-5 T 15-10-2018 XDD1_1326 ff94ed8ace75de2ce90014386ff35d50 738 SUPERFAMILY SSF47384 664 731 1.43E-10 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XDD1_1326 ff94ed8ace75de2ce90014386ff35d50 738 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 23 231 8.8E-96 T 15-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 XDD1_1326 ff94ed8ace75de2ce90014386ff35d50 738 Pfam PF00512 His Kinase A (phospho-acceptor) domain 670 730 4.5E-8 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_1326 ff94ed8ace75de2ce90014386ff35d50 738 Pfam PF13492 GAF domain 535 650 3.0E-11 T 15-10-2018 IPR003018 GAF domain GO:0005515 XDD1_1326 ff94ed8ace75de2ce90014386ff35d50 738 SMART SM00388 669 736 6.1E-10 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XDD1_0857 9d0639187bce1bf36b04830d59f137a0 621 SUPERFAMILY SSF52518 318 503 1.1E-56 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_0857 9d0639187bce1bf36b04830d59f137a0 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 46.172 T 15-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XDD1_0857 9d0639187bce1bf36b04830d59f137a0 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XDD1_0857 9d0639187bce1bf36b04830d59f137a0 621 Gene3D G3DSA:3.40.50.920 495 621 2.6E-43 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XDD1_0857 9d0639187bce1bf36b04830d59f137a0 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 3.2E-117 T 15-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XDD1_0857 9d0639187bce1bf36b04830d59f137a0 621 Pfam PF02779 Transketolase, pyrimidine binding domain 320 479 3.0E-38 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XDD1_0857 9d0639187bce1bf36b04830d59f137a0 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 0.0 T 15-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XDD1_0857 9d0639187bce1bf36b04830d59f137a0 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 15-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XDD1_0857 9d0639187bce1bf36b04830d59f137a0 621 SMART SM00861 319 484 1.5E-66 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XDD1_0857 9d0639187bce1bf36b04830d59f137a0 621 SUPERFAMILY SSF52518 9 381 7.52E-79 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_0857 9d0639187bce1bf36b04830d59f137a0 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 5.2E-29 T 15-10-2018 IPR033248 Transketolase, C-terminal domain XDD1_0857 9d0639187bce1bf36b04830d59f137a0 621 Gene3D G3DSA:3.40.50.970 317 489 1.7E-65 T 15-10-2018 XDD1_0857 9d0639187bce1bf36b04830d59f137a0 621 SUPERFAMILY SSF52922 491 619 2.49E-34 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XDD1_2020 39696d0d713157f771eaa386f112a116 244 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 153 4.6E-53 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_2020 39696d0d713157f771eaa386f112a116 244 Gene3D G3DSA:2.30.110.20 3 157 1.2E-48 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_2020 39696d0d713157f771eaa386f112a116 244 SUPERFAMILY SSF141452 5 152 2.48E-31 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_2020 39696d0d713157f771eaa386f112a116 244 Pfam PF05638 Type VI secretion system effector, Hcp 6 143 9.0E-21 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_3939 2e967de9ae71174596b94a8ece6ddc21 307 SUPERFAMILY SSF53613 7 304 7.64E-51 T 15-10-2018 IPR029056 Ribokinase-like XDD1_3939 2e967de9ae71174596b94a8ece6ddc21 307 Gene3D G3DSA:3.40.1190.20 1 305 2.0E-51 T 15-10-2018 IPR029056 Ribokinase-like XDD1_3939 2e967de9ae71174596b94a8ece6ddc21 307 Pfam PF00294 pfkB family carbohydrate kinase 8 294 3.0E-37 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB XDD1_0681 123d77b6992d5ecab2e8aa2a55e1a732 99 Gene3D G3DSA:1.10.260.40 9 89 3.1E-14 T 15-10-2018 XDD1_0681 123d77b6992d5ecab2e8aa2a55e1a732 99 SMART SM00530 31 86 1.4E-12 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_0681 123d77b6992d5ecab2e8aa2a55e1a732 99 SUPERFAMILY SSF47413 31 92 2.31E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_0681 123d77b6992d5ecab2e8aa2a55e1a732 99 Pfam PF01381 Helix-turn-helix 33 83 4.9E-13 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_0470 b7d122bf879b89c421b037f88046c1f6 97 SMART SM01103 3 86 6.5E-41 T 15-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 XDD1_0470 b7d122bf879b89c421b037f88046c1f6 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 96 3.0E-37 T 15-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 XDD1_0470 b7d122bf879b89c421b037f88046c1f6 97 SUPERFAMILY SSF75471 1 94 7.98E-31 T 15-10-2018 IPR035920 YhbY-like superfamily XDD1_0470 b7d122bf879b89c421b037f88046c1f6 97 Gene3D G3DSA:3.30.110.60 1 97 5.0E-37 T 15-10-2018 IPR035920 YhbY-like superfamily XDD1_0470 b7d122bf879b89c421b037f88046c1f6 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 96 2.9E-36 T 15-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 XDD1_0470 b7d122bf879b89c421b037f88046c1f6 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 5.4E-23 T 15-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 XDD1_2810 8506f4d4497e776608467f6c1674de5b 226 SMART SM00535 21 149 8.3E-59 T 15-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 XDD1_2810 8506f4d4497e776608467f6c1674de5b 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 15-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 XDD1_2810 8506f4d4497e776608467f6c1674de5b 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 1.5E-75 T 15-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 XDD1_2810 8506f4d4497e776608467f6c1674de5b 226 Pfam PF14622 Ribonuclease-III-like 21 140 1.3E-34 T 15-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 XDD1_2810 8506f4d4497e776608467f6c1674de5b 226 SMART SM00358 156 224 5.9E-24 T 15-10-2018 IPR014720 Double-stranded RNA-binding domain XDD1_2810 8506f4d4497e776608467f6c1674de5b 226 Gene3D G3DSA:1.10.1520.10 4 147 2.6E-45 T 15-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 XDD1_2810 8506f4d4497e776608467f6c1674de5b 226 Gene3D G3DSA:3.30.160.20 154 224 3.6E-20 T 15-10-2018 XDD1_2810 8506f4d4497e776608467f6c1674de5b 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 4.7E-15 T 15-10-2018 IPR014720 Double-stranded RNA-binding domain XDD1_2810 8506f4d4497e776608467f6c1674de5b 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.905 T 15-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 XDD1_2810 8506f4d4497e776608467f6c1674de5b 226 SUPERFAMILY SSF54768 109 223 2.51E-28 T 15-10-2018 XDD1_2810 8506f4d4497e776608467f6c1674de5b 226 SUPERFAMILY SSF69065 6 159 7.15E-50 T 15-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 XDD1_1618 3476634a2e88f3539c532e3224ca8776 382 Gene3D G3DSA:3.40.640.10 11 315 2.7E-60 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_1618 3476634a2e88f3539c532e3224ca8776 382 SUPERFAMILY SSF53383 21 362 5.41E-54 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_1618 3476634a2e88f3539c532e3224ca8776 382 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 20 293 2.3E-57 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase XDD1_0278 b62922afc6cca960a9f8871c7c444745 158 PRINTS PR00601 Bacterioferritin signature 65 85 2.1E-75 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XDD1_0278 b62922afc6cca960a9f8871c7c444745 158 PRINTS PR00601 Bacterioferritin signature 86 106 2.1E-75 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XDD1_0278 b62922afc6cca960a9f8871c7c444745 158 PRINTS PR00601 Bacterioferritin signature 3 22 2.1E-75 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XDD1_0278 b62922afc6cca960a9f8871c7c444745 158 PRINTS PR00601 Bacterioferritin signature 107 127 2.1E-75 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XDD1_0278 b62922afc6cca960a9f8871c7c444745 158 PRINTS PR00601 Bacterioferritin signature 23 43 2.1E-75 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XDD1_0278 b62922afc6cca960a9f8871c7c444745 158 PRINTS PR00601 Bacterioferritin signature 128 149 2.1E-75 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XDD1_0278 b62922afc6cca960a9f8871c7c444745 158 PRINTS PR00601 Bacterioferritin signature 44 64 2.1E-75 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XDD1_0278 b62922afc6cca960a9f8871c7c444745 158 SUPERFAMILY SSF47240 1 154 1.04E-55 T 15-10-2018 IPR009078 Ferritin-like superfamily XDD1_0278 b62922afc6cca960a9f8871c7c444745 158 PIRSF PIRSF002560 1 157 2.3E-72 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XDD1_0278 b62922afc6cca960a9f8871c7c444745 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 1.0E-79 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XDD1_0278 b62922afc6cca960a9f8871c7c444745 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XDD1_0278 b62922afc6cca960a9f8871c7c444745 158 Pfam PF00210 Ferritin-like domain 8 144 2.1E-41 T 15-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 XDD1_0278 b62922afc6cca960a9f8871c7c444745 158 Gene3D G3DSA:1.20.1260.10 1 158 5.3E-72 T 15-10-2018 IPR012347 Ferritin-like XDD1_1218 ecc4b4a04780e52920e632486600dce4 384 SUPERFAMILY SSF53850 103 289 1.02E-54 T 15-10-2018 XDD1_1218 ecc4b4a04780e52920e632486600dce4 384 Gene3D G3DSA:1.20.59.10 1 105 3.0E-31 T 15-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XDD1_1218 ecc4b4a04780e52920e632486600dce4 384 Gene3D G3DSA:3.30.70.260 289 377 5.3E-24 T 15-10-2018 XDD1_1218 ecc4b4a04780e52920e632486600dce4 384 Pfam PF01817 Chorismate mutase type II 9 87 1.8E-15 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XDD1_1218 ecc4b4a04780e52920e632486600dce4 384 Gene3D G3DSA:3.40.190.10 106 279 1.7E-53 T 15-10-2018 XDD1_1218 ecc4b4a04780e52920e632486600dce4 384 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 5 87 1.2E-28 T 15-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 XDD1_1218 ecc4b4a04780e52920e632486600dce4 384 SMART SM00830 9 89 1.2E-22 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XDD1_1218 ecc4b4a04780e52920e632486600dce4 384 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 323 330 - T 15-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 XDD1_1218 ecc4b4a04780e52920e632486600dce4 384 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 259 281 - T 15-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 XDD1_1218 ecc4b4a04780e52920e632486600dce4 384 PIRSF PIRSF001500 1 378 4.7E-137 T 15-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 XDD1_1218 ecc4b4a04780e52920e632486600dce4 384 Gene3D G3DSA:3.40.190.10 187 272 1.7E-53 T 15-10-2018 XDD1_1218 ecc4b4a04780e52920e632486600dce4 384 SUPERFAMILY SSF55021 278 375 2.29E-24 T 15-10-2018 XDD1_1218 ecc4b4a04780e52920e632486600dce4 384 SUPERFAMILY SSF48600 4 91 2.01E-20 T 15-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XDD1_1218 ecc4b4a04780e52920e632486600dce4 384 Pfam PF00800 Prephenate dehydratase 104 285 1.7E-58 T 15-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 XDD1_0472 fb78bc70ccc0ed34aadb9213de2e055c 639 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 613 37.315 T 15-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 XDD1_0472 fb78bc70ccc0ed34aadb9213de2e055c 639 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 15-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 XDD1_0472 fb78bc70ccc0ed34aadb9213de2e055c 639 Pfam PF01434 Peptidase family M41 386 595 2.6E-81 T 15-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 XDD1_0472 fb78bc70ccc0ed34aadb9213de2e055c 639 Gene3D G3DSA:1.20.58.760 401 604 4.1E-70 T 15-10-2018 XDD1_0472 fb78bc70ccc0ed34aadb9213de2e055c 639 SMART SM00382 188 327 1.9E-26 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0472 fb78bc70ccc0ed34aadb9213de2e055c 639 SUPERFAMILY SSF52540 145 395 2.07E-72 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0472 fb78bc70ccc0ed34aadb9213de2e055c 639 Gene3D G3DSA:2.40.50.920 27 102 1.4E-28 T 15-10-2018 XDD1_0472 fb78bc70ccc0ed34aadb9213de2e055c 639 Gene3D G3DSA:3.40.50.300 145 324 3.9E-70 T 15-10-2018 XDD1_0472 fb78bc70ccc0ed34aadb9213de2e055c 639 Pfam PF06480 FtsH Extracellular 8 97 3.0E-14 T 15-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 XDD1_0472 fb78bc70ccc0ed34aadb9213de2e055c 639 Gene3D G3DSA:1.10.8.60 326 400 5.1E-28 T 15-10-2018 XDD1_0472 fb78bc70ccc0ed34aadb9213de2e055c 639 SUPERFAMILY SSF140990 406 605 3.01E-73 T 15-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 XDD1_0472 fb78bc70ccc0ed34aadb9213de2e055c 639 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 7.7E-46 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_0472 fb78bc70ccc0ed34aadb9213de2e055c 639 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 104 597 1.5E-245 T 15-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 XDD1_3405 2cf973dc99c4815f99cfc6b9dc02bbad 217 SUPERFAMILY SSF55821 7 211 8.01E-87 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily XDD1_3405 2cf973dc99c4815f99cfc6b9dc02bbad 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 42.976 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XDD1_3405 2cf973dc99c4815f99cfc6b9dc02bbad 217 Gene3D G3DSA:3.90.870.10 1 217 3.5E-94 T 15-10-2018 XDD1_3405 2cf973dc99c4815f99cfc6b9dc02bbad 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 209 4.7E-84 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XDD1_3405 2cf973dc99c4815f99cfc6b9dc02bbad 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 7.0E-84 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XDD1_3532 103eadf6209b982db40e97e66da29bec 90 SUPERFAMILY SSF55594 4 90 6.41E-24 T 15-10-2018 IPR035895 HPr-like superfamily XDD1_3532 103eadf6209b982db40e97e66da29bec 90 Gene3D G3DSA:3.30.1340.10 1 85 2.4E-28 T 15-10-2018 IPR035895 HPr-like superfamily XDD1_3532 103eadf6209b982db40e97e66da29bec 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 15-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site XDD1_3532 103eadf6209b982db40e97e66da29bec 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 2.0E-22 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like XDD1_3532 103eadf6209b982db40e97e66da29bec 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 1.5E-21 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like XDD1_3532 103eadf6209b982db40e97e66da29bec 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 4.5E-8 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like XDD1_3532 103eadf6209b982db40e97e66da29bec 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 4.5E-8 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like XDD1_3532 103eadf6209b982db40e97e66da29bec 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 4.5E-8 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like XDD1_0058 b0f9a424cf9f3b964aa3d3469f755b5b 553 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 66 471 2.8E-63 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 XDD1_0058 b0f9a424cf9f3b964aa3d3469f755b5b 553 Gene3D G3DSA:1.20.1730.10 51 549 2.0E-59 T 15-10-2018 IPR038377 Sodium/glucose symporter superfamily XDD1_0058 b0f9a424cf9f3b964aa3d3469f755b5b 553 Pfam PF00474 Sodium:solute symporter family 66 472 9.4E-126 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 XDD1_0058 b0f9a424cf9f3b964aa3d3469f755b5b 553 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 14 553 0.0 T 15-10-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 XDD1_0058 b0f9a424cf9f3b964aa3d3469f755b5b 553 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 181 206 - T 15-10-2018 IPR018212 Sodium/solute symporter, conserved site XDD1_0058 b0f9a424cf9f3b964aa3d3469f755b5b 553 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 454 474 - T 15-10-2018 IPR018212 Sodium/solute symporter, conserved site XDD1_1327 77318b4002d7fd23fdbc4592b19461cf 203 Pfam PF02669 K+-transporting ATPase, c chain 5 186 7.3E-68 T 15-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 XDD1_1327 77318b4002d7fd23fdbc4592b19461cf 203 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 188 33.504 T 15-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 XDD1_1327 77318b4002d7fd23fdbc4592b19461cf 203 PIRSF PIRSF001296 1 192 7.8E-74 T 15-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 XDD1_1327 77318b4002d7fd23fdbc4592b19461cf 203 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 188 1.7E-67 T 15-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 XDD1_0743 3577b4a8023143e93cf943b6e1f99c37 389 Gene3D G3DSA:3.40.50.880 155 382 3.1E-78 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_0743 3577b4a8023143e93cf943b6e1f99c37 389 PRINTS PR00096 Glutamine amidotransferase superfamily signature 239 248 7.9E-11 T 15-10-2018 XDD1_0743 3577b4a8023143e93cf943b6e1f99c37 389 PRINTS PR00096 Glutamine amidotransferase superfamily signature 267 278 7.9E-11 T 15-10-2018 XDD1_0743 3577b4a8023143e93cf943b6e1f99c37 389 PRINTS PR00096 Glutamine amidotransferase superfamily signature 352 365 7.9E-11 T 15-10-2018 XDD1_0743 3577b4a8023143e93cf943b6e1f99c37 389 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 197 211 7.0E-41 T 15-10-2018 XDD1_0743 3577b4a8023143e93cf943b6e1f99c37 389 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 267 283 7.0E-41 T 15-10-2018 XDD1_0743 3577b4a8023143e93cf943b6e1f99c37 389 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 284 301 7.0E-41 T 15-10-2018 XDD1_0743 3577b4a8023143e93cf943b6e1f99c37 389 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 236 250 7.0E-41 T 15-10-2018 XDD1_0743 3577b4a8023143e93cf943b6e1f99c37 389 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 309 320 7.0E-41 T 15-10-2018 XDD1_0743 3577b4a8023143e93cf943b6e1f99c37 389 SUPERFAMILY SSF52317 156 381 2.9E-63 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_0743 3577b4a8023143e93cf943b6e1f99c37 389 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 381 48.743 T 15-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_0743 3577b4a8023143e93cf943b6e1f99c37 389 Gene3D G3DSA:3.50.30.20 2 154 6.5E-60 T 15-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_0743 3577b4a8023143e93cf943b6e1f99c37 389 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 378 9.5E-151 T 15-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_0743 3577b4a8023143e93cf943b6e1f99c37 389 SUPERFAMILY SSF52021 3 141 1.03E-56 T 15-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_0743 3577b4a8023143e93cf943b6e1f99c37 389 Pfam PF00117 Glutamine amidotransferase class-I 200 375 4.0E-49 T 15-10-2018 IPR017926 Glutamine amidotransferase XDD1_0743 3577b4a8023143e93cf943b6e1f99c37 389 SMART SM01097 3 133 9.5E-91 T 15-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_0743 3577b4a8023143e93cf943b6e1f99c37 389 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 1.9E-52 T 15-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_2334 5d8dfee6a649ef04b84520a5a6a2ce9c 260 SUPERFAMILY SSF117143 93 222 2.35E-34 T 15-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like XDD1_2334 5d8dfee6a649ef04b84520a5a6a2ce9c 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 6.0E-28 T 15-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G XDD1_2334 5d8dfee6a649ef04b84520a5a6a2ce9c 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 1.3E-46 T 15-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G XDD1_2334 5d8dfee6a649ef04b84520a5a6a2ce9c 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 1.5E-25 T 15-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain XDD1_2334 5d8dfee6a649ef04b84520a5a6a2ce9c 260 Pfam PF00460 Flagella basal body rod protein 5 35 8.8E-14 T 15-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 XDD1_2334 5d8dfee6a649ef04b84520a5a6a2ce9c 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 15-10-2018 IPR019776 Flagellar basal body rod protein, conserved site XDD1_2334 5d8dfee6a649ef04b84520a5a6a2ce9c 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 1.1E-115 T 15-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 XDD1_0453 44ef54e4a45a22fcdb3baf2386051e8c 156 Gene3D G3DSA:1.10.10.10 1 78 6.5E-34 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0453 44ef54e4a45a22fcdb3baf2386051e8c 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 58.443 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 XDD1_0453 44ef54e4a45a22fcdb3baf2386051e8c 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 5.9E-21 T 15-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 XDD1_0453 44ef54e4a45a22fcdb3baf2386051e8c 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 3.0E-25 T 15-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 XDD1_0453 44ef54e4a45a22fcdb3baf2386051e8c 156 Gene3D G3DSA:3.30.1360.40 79 156 3.5E-29 T 15-10-2018 XDD1_0453 44ef54e4a45a22fcdb3baf2386051e8c 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 5.0E-23 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 XDD1_0453 44ef54e4a45a22fcdb3baf2386051e8c 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 5.0E-23 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 XDD1_0453 44ef54e4a45a22fcdb3baf2386051e8c 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 5.0E-23 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 XDD1_0453 44ef54e4a45a22fcdb3baf2386051e8c 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 5.0E-23 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 XDD1_0453 44ef54e4a45a22fcdb3baf2386051e8c 156 SUPERFAMILY SSF55252 82 151 2.75E-18 T 15-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 XDD1_0453 44ef54e4a45a22fcdb3baf2386051e8c 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 152 7.8E-46 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 XDD1_0453 44ef54e4a45a22fcdb3baf2386051e8c 156 SUPERFAMILY SSF46785 3 76 7.98E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_0453 44ef54e4a45a22fcdb3baf2386051e8c 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 1.0E-25 T 15-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 XDD1_2936 33e2529a48409166c73ac04aa4b22e00 249 Gene3D G3DSA:1.10.10.2560 133 233 5.3E-31 T 15-10-2018 XDD1_2936 33e2529a48409166c73ac04aa4b22e00 249 Gene3D G3DSA:3.40.50.150 19 241 5.3E-31 T 15-10-2018 XDD1_2936 33e2529a48409166c73ac04aa4b22e00 249 Pfam PF13649 Methyltransferase domain 39 124 6.0E-14 T 15-10-2018 XDD1_2936 33e2529a48409166c73ac04aa4b22e00 249 SUPERFAMILY SSF53335 3 210 1.69E-27 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_2200 d737f82756a2da108ca125e29c7db22f 104 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 85 2.0E-18 T 15-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 XDD1_2200 d737f82756a2da108ca125e29c7db22f 104 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 20.787 T 15-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 XDD1_0809 8bfa8d63ec8a1f4812d2e90c5097b5cd 404 Gene3D G3DSA:1.20.1170.10 68 398 1.8E-5 T 15-10-2018 XDD1_0809 8bfa8d63ec8a1f4812d2e90c5097b5cd 404 SUPERFAMILY SSF58100 44 398 6.02E-65 T 15-10-2018 XDD1_0096 f7307e14d9adc297f550053809dfd508 447 SMART SM00839 204 445 3.6E-95 T 15-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 XDD1_0096 f7307e14d9adc297f550053809dfd508 447 Gene3D G3DSA:1.10.285.10 402 447 1.0E-10 T 15-10-2018 XDD1_0096 f7307e14d9adc297f550053809dfd508 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 1.5E-85 T 15-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 XDD1_0096 f7307e14d9adc297f550053809dfd508 447 SUPERFAMILY SSF51735 202 446 2.81E-75 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0096 f7307e14d9adc297f550053809dfd508 447 Gene3D G3DSA:1.10.285.10 14 374 5.7E-173 T 15-10-2018 XDD1_0096 f7307e14d9adc297f550053809dfd508 447 Gene3D G3DSA:3.40.50.10860 55 190 5.7E-173 T 15-10-2018 XDD1_0096 f7307e14d9adc297f550053809dfd508 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 15-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 XDD1_0096 f7307e14d9adc297f550053809dfd508 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 184 6.0E-50 T 15-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 XDD1_0096 f7307e14d9adc297f550053809dfd508 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 4.0E-32 T 15-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 XDD1_0096 f7307e14d9adc297f550053809dfd508 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 4.0E-32 T 15-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 XDD1_0096 f7307e14d9adc297f550053809dfd508 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 4.0E-32 T 15-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 XDD1_0096 f7307e14d9adc297f550053809dfd508 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 4.0E-32 T 15-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 XDD1_0096 f7307e14d9adc297f550053809dfd508 447 PIRSF PIRSF000185 21 447 4.9E-112 T 15-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 XDD1_0096 f7307e14d9adc297f550053809dfd508 447 SUPERFAMILY SSF53223 10 196 5.44E-73 T 15-10-2018 XDD1_0096 f7307e14d9adc297f550053809dfd508 447 Gene3D G3DSA:3.40.50.720 209 373 5.7E-173 T 15-10-2018 XDD1_3113 33dec63a4c07a5fd6cb9e869c80a3ff7 199 Pfam PF13936 Helix-turn-helix domain 3 45 3.0E-15 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_3113 33dec63a4c07a5fd6cb9e869c80a3ff7 199 SUPERFAMILY SSF46689 5 116 3.76E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0490 8b3b4de56f1e0cf00564159b7fce34fe 323 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 40 315 4.9E-18 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XDD1_0490 8b3b4de56f1e0cf00564159b7fce34fe 323 SUPERFAMILY SSF111369 107 253 2.35E-10 T 15-10-2018 XDD1_0490 8b3b4de56f1e0cf00564159b7fce34fe 323 Gene3D G3DSA:1.10.287.470 72 201 9.4E-41 T 15-10-2018 XDD1_0490 8b3b4de56f1e0cf00564159b7fce34fe 323 SUPERFAMILY SSF111369 35 94 2.62E-6 T 15-10-2018 XDD1_0490 8b3b4de56f1e0cf00564159b7fce34fe 323 Gene3D G3DSA:2.40.30.170 28 317 9.4E-41 T 15-10-2018 XDD1_0490 8b3b4de56f1e0cf00564159b7fce34fe 323 Gene3D G3DSA:2.40.50.100 39 236 9.4E-41 T 15-10-2018 XDD1_3908 863d37bf274b5db797ff8a8bf20c5aea 337 Pfam PF02126 Phosphotriesterase family 41 327 1.1E-97 T 15-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 XDD1_3908 863d37bf274b5db797ff8a8bf20c5aea 337 PIRSF PIRSF016839 28 331 1.2E-117 T 15-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 XDD1_3908 863d37bf274b5db797ff8a8bf20c5aea 337 Gene3D G3DSA:3.20.20.140 38 327 2.3E-102 T 15-10-2018 XDD1_3908 863d37bf274b5db797ff8a8bf20c5aea 337 SUPERFAMILY SSF51556 40 326 2.27E-93 T 15-10-2018 IPR032466 Metal-dependent hydrolase XDD1_3396 00eaff3664017614aded17b912d22382 755 Gene3D G3DSA:1.10.268.10 345 484 1.3E-44 T 15-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XDD1_3396 00eaff3664017614aded17b912d22382 755 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 744 33.969 T 15-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XDD1_3396 00eaff3664017614aded17b912d22382 755 SMART SM00434 12 462 5.8E-235 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XDD1_3396 00eaff3664017614aded17b912d22382 755 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 9 744 0.0 T 15-10-2018 XDD1_3396 00eaff3664017614aded17b912d22382 755 SUPERFAMILY SSF101904 499 742 9.02E-51 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal XDD1_3396 00eaff3664017614aded17b912d22382 755 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 646 683 4.7E-7 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XDD1_3396 00eaff3664017614aded17b912d22382 755 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 634 6.3E-4 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XDD1_3396 00eaff3664017614aded17b912d22382 755 Gene3D G3DSA:3.30.1360.40 163 344 8.9E-72 T 15-10-2018 XDD1_3396 00eaff3664017614aded17b912d22382 755 SUPERFAMILY SSF56719 32 483 1.12E-153 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XDD1_3396 00eaff3664017614aded17b912d22382 755 Gene3D G3DSA:2.120.10.90 501 732 5.8E-13 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal XDD1_3396 00eaff3664017614aded17b912d22382 755 Gene3D G3DSA:3.90.199.10 31 162 5.4E-58 T 15-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 XDD1_3396 00eaff3664017614aded17b912d22382 755 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 467 1.3E-133 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XDD1_3791 22fd27b18c8b28c631efd9cf64bde317 312 Gene3D G3DSA:3.30.930.10 1 214 3.6E-111 T 15-10-2018 XDD1_3791 22fd27b18c8b28c631efd9cf64bde317 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.5E-71 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XDD1_3791 22fd27b18c8b28c631efd9cf64bde317 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.5E-71 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XDD1_3791 22fd27b18c8b28c631efd9cf64bde317 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.5E-71 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XDD1_3791 22fd27b18c8b28c631efd9cf64bde317 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.5E-71 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XDD1_3791 22fd27b18c8b28c631efd9cf64bde317 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.5E-71 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XDD1_3791 22fd27b18c8b28c631efd9cf64bde317 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.5E-71 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XDD1_3791 22fd27b18c8b28c631efd9cf64bde317 312 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.556 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XDD1_3791 22fd27b18c8b28c631efd9cf64bde317 312 Gene3D G3DSA:1.20.58.180 215 296 4.9E-33 T 15-10-2018 XDD1_3791 22fd27b18c8b28c631efd9cf64bde317 312 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 2.2E-150 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XDD1_3791 22fd27b18c8b28c631efd9cf64bde317 312 SUPERFAMILY SSF55681 8 292 9.94E-134 T 15-10-2018 XDD1_3791 22fd27b18c8b28c631efd9cf64bde317 312 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 2.9E-175 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XDD1_1001 014b0a2f6fe72372beca080d3043c54e 723 Pfam PF13454 FAD-NAD(P)-binding 5 180 6.5E-25 T 15-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain XDD1_1001 014b0a2f6fe72372beca080d3043c54e 723 SUPERFAMILY SSF51905 1 231 2.27E-10 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1001 014b0a2f6fe72372beca080d3043c54e 723 Gene3D G3DSA:3.50.50.60 2 376 3.9E-8 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1931 15a048aac3547fa24a3b04af4d5aff0e 425 SUPERFAMILY SSF103473 3 424 7.32E-82 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1931 15a048aac3547fa24a3b04af4d5aff0e 425 Gene3D G3DSA:1.20.1250.20 229 423 1.3E-31 T 15-10-2018 XDD1_1931 15a048aac3547fa24a3b04af4d5aff0e 425 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 19 418 2.5E-136 T 15-10-2018 XDD1_1931 15a048aac3547fa24a3b04af4d5aff0e 425 Pfam PF07690 Major Facilitator Superfamily 16 384 2.5E-54 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_1931 15a048aac3547fa24a3b04af4d5aff0e 425 Gene3D G3DSA:1.20.1250.20 2 198 7.4E-45 T 15-10-2018 XDD1_1598 5396bc6bcb542a2732a3f943c9731268 370 SUPERFAMILY SSF50800 3 264 7.53E-16 T 15-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily XDD1_1598 5396bc6bcb542a2732a3f943c9731268 370 Gene3D G3DSA:3.10.20.30 278 369 3.2E-18 T 15-10-2018 IPR012675 Beta-grasp domain superfamily XDD1_1598 5396bc6bcb542a2732a3f943c9731268 370 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 323 331 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 XDD1_1598 5396bc6bcb542a2732a3f943c9731268 370 SUPERFAMILY SSF141673 4 132 1.31E-30 T 15-10-2018 XDD1_1598 5396bc6bcb542a2732a3f943c9731268 370 Pfam PF03473 MOSC domain 139 262 4.5E-28 T 15-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 XDD1_1598 5396bc6bcb542a2732a3f943c9731268 370 SUPERFAMILY SSF54292 287 369 1.28E-21 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 XDD1_1598 5396bc6bcb542a2732a3f943c9731268 370 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 303 361 5.0E-12 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 XDD1_1598 5396bc6bcb542a2732a3f943c9731268 370 Pfam PF03476 MOSC N-terminal beta barrel domain 1 115 1.1E-26 T 15-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 XDD1_2238 6ff30438574df9d645e70a70809d00a1 133 Pfam PF00816 H-NS histone family 32 125 3.0E-19 T 15-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 XDD1_2238 6ff30438574df9d645e70a70809d00a1 133 Gene3D G3DSA:4.10.430.10 90 133 1.0E-22 T 15-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 XDD1_2238 6ff30438574df9d645e70a70809d00a1 133 SMART SM00528 86 133 3.1E-24 T 15-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 XDD1_2238 6ff30438574df9d645e70a70809d00a1 133 SUPERFAMILY SSF81273 2 58 9.42E-17 T 15-10-2018 XDD1_2238 6ff30438574df9d645e70a70809d00a1 133 PIRSF PIRSF002096 1 133 7.8E-52 T 15-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 XDD1_2238 6ff30438574df9d645e70a70809d00a1 133 Gene3D G3DSA:1.10.287.1050 1 83 9.2E-31 T 15-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 XDD1_2238 6ff30438574df9d645e70a70809d00a1 133 SUPERFAMILY SSF81273 92 133 2.16E-10 T 15-10-2018 XDD1_3592 9a3a1d4eaf86882f6feb5fcf200153bf 131 PIRSF PIRSF000180 2 130 3.1E-56 T 15-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 XDD1_3592 9a3a1d4eaf86882f6feb5fcf200153bf 131 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 8 129 2.0E-41 T 15-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 XDD1_3592 9a3a1d4eaf86882f6feb5fcf200153bf 131 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 28.578 T 15-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 XDD1_3592 9a3a1d4eaf86882f6feb5fcf200153bf 131 Gene3D G3DSA:1.20.1300.10 2 131 6.9E-49 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_3592 9a3a1d4eaf86882f6feb5fcf200153bf 131 SUPERFAMILY SSF81343 2 130 5.36E-56 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_3592 9a3a1d4eaf86882f6feb5fcf200153bf 131 Pfam PF02300 Fumarate reductase subunit C 3 128 1.2E-52 T 15-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 XDD1_0709 fc938dd69f0ec904e632eb36009f540d 62 Gene3D G3DSA:1.10.260.40 1 62 4.6E-13 T 15-10-2018 XDD1_0709 fc938dd69f0ec904e632eb36009f540d 62 Pfam PF01381 Helix-turn-helix 13 56 2.6E-6 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_0709 fc938dd69f0ec904e632eb36009f540d 62 SUPERFAMILY SSF47413 8 58 2.21E-13 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_1399 9ec6370c8c57213df3242ebe9e9bd5e6 252 Pfam PF14348 Domain of unknown function (DUF4400) 54 249 2.5E-70 T 15-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type XDD1_1399 9ec6370c8c57213df3242ebe9e9bd5e6 252 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 17 252 3.7E-93 T 15-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type XDD1_3065 94f2e1534d9a3f5f2fdac89854b40a0b 343 PIRSF PIRSF002825 2 340 4.0E-74 T 15-10-2018 IPR026045 Ferric binding protein XDD1_3065 94f2e1534d9a3f5f2fdac89854b40a0b 343 SUPERFAMILY SSF53850 24 326 1.68E-72 T 15-10-2018 XDD1_3065 94f2e1534d9a3f5f2fdac89854b40a0b 343 Gene3D G3DSA:3.40.190.10 133 321 1.8E-119 T 15-10-2018 XDD1_3065 94f2e1534d9a3f5f2fdac89854b40a0b 343 Pfam PF13343 Bacterial extracellular solute-binding protein 75 290 9.6E-32 T 15-10-2018 XDD1_3065 94f2e1534d9a3f5f2fdac89854b40a0b 343 Gene3D G3DSA:3.40.190.10 31 306 1.8E-119 T 15-10-2018 XDD1_1474 43b96ba598aee3eb15983692cb9a28fc 384 Gene3D G3DSA:3.90.1150.10 42 376 6.3E-132 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_1474 43b96ba598aee3eb15983692cb9a28fc 384 SUPERFAMILY SSF53383 4 379 1.88E-101 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_1474 43b96ba598aee3eb15983692cb9a28fc 384 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 4 383 47.255 T 15-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 XDD1_1474 43b96ba598aee3eb15983692cb9a28fc 384 Pfam PF00155 Aminotransferase class I and II 43 379 2.0E-57 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XDD1_1474 43b96ba598aee3eb15983692cb9a28fc 384 Gene3D G3DSA:3.40.640.10 58 285 6.3E-132 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_1474 43b96ba598aee3eb15983692cb9a28fc 384 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 234 243 - T 15-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 XDD1_1474 43b96ba598aee3eb15983692cb9a28fc 384 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 21 380 2.6E-135 T 15-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 XDD1_0416 a1c89233f340492dddb120e71c016dbd 154 Gene3D G3DSA:3.40.50.300 1 153 1.2E-47 T 15-10-2018 XDD1_0416 a1c89233f340492dddb120e71c016dbd 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 2.1E-52 T 15-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 XDD1_0416 a1c89233f340492dddb120e71c016dbd 154 SUPERFAMILY SSF52540 26 140 1.69E-24 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0416 a1c89233f340492dddb120e71c016dbd 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 3.9E-41 T 15-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 XDD1_3418 fc0df885bfd7797b84e2e153ee974a77 259 SUPERFAMILY SSF55729 154 256 3.9E-17 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_3418 fc0df885bfd7797b84e2e153ee974a77 259 Gene3D G3DSA:3.40.630.30 33 256 2.7E-21 T 15-10-2018 XDD1_3418 fc0df885bfd7797b84e2e153ee974a77 259 Pfam PF13673 Acetyltransferase (GNAT) domain 167 250 1.3E-7 T 15-10-2018 IPR000182 GNAT domain XDD1_1849 74695351a8613702b5c707ba0fbe35bd 78 SUPERFAMILY SSF58042 23 77 1.96E-19 T 15-10-2018 XDD1_1849 74695351a8613702b5c707ba0fbe35bd 78 Gene3D G3DSA:1.20.5.190 22 77 2.0E-23 T 15-10-2018 XDD1_1849 74695351a8613702b5c707ba0fbe35bd 78 PIRSF PIRSF002855 1 78 1.0E-27 T 15-10-2018 IPR016367 Murein-lipoprotein XDD1_1849 74695351a8613702b5c707ba0fbe35bd 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 9.5E-25 T 15-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 XDD1_1781 2f79b17aba61eb625ccf0fef1136ac96 661 Gene3D G3DSA:3.40.50.12230 1 304 2.6E-107 T 15-10-2018 XDD1_1781 2f79b17aba61eb625ccf0fef1136ac96 661 Gene3D G3DSA:3.40.50.720 314 657 1.0E-124 T 15-10-2018 XDD1_1781 2f79b17aba61eb625ccf0fef1136ac96 661 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 1.3E-42 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 XDD1_1781 2f79b17aba61eb625ccf0fef1136ac96 661 PIRSF PIRSF036506 1 660 0.0 T 15-10-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00520+2.1.2.13+1.1.1.305 XDD1_1781 2f79b17aba61eb625ccf0fef1136ac96 661 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 64.12 T 15-10-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00520+2.1.2.13+1.1.1.305 XDD1_1781 2f79b17aba61eb625ccf0fef1136ac96 661 SUPERFAMILY SSF51735 316 650 9.47E-71 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1781 2f79b17aba61eb625ccf0fef1136ac96 661 Pfam PF02911 Formyl transferase, C-terminal domain 203 282 3.1E-19 T 15-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XDD1_1781 2f79b17aba61eb625ccf0fef1136ac96 661 Pfam PF00551 Formyl transferase 57 173 9.6E-26 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XDD1_1781 2f79b17aba61eb625ccf0fef1136ac96 661 SUPERFAMILY SSF53328 1 201 4.58E-57 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XDD1_1781 2f79b17aba61eb625ccf0fef1136ac96 661 SUPERFAMILY SSF50486 204 301 1.52E-24 T 15-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 XDD1_3888 0245990a77a5caaeeae3736622a42a5c 166 Gene3D G3DSA:3.40.630.30 2 156 4.2E-42 T 15-10-2018 XDD1_3888 0245990a77a5caaeeae3736622a42a5c 166 SUPERFAMILY SSF55729 18 145 3.78E-14 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_3888 0245990a77a5caaeeae3736622a42a5c 166 Pfam PF13508 Acetyltransferase (GNAT) domain 43 144 8.3E-9 T 15-10-2018 IPR000182 GNAT domain XDD1_p0003 a0ad270e691e3ac2f505045cdbcc1d35 99 Gene3D G3DSA:3.30.2310.20 1 98 6.8E-16 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XDD1_p0003 a0ad270e691e3ac2f505045cdbcc1d35 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 95 1.5E-12 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XDD1_p0003 a0ad270e691e3ac2f505045cdbcc1d35 99 SUPERFAMILY SSF143011 1 90 2.63E-5 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XDD1_1520 9439799a3cda99ae1f636e9eed701144 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 14 375 7.5E-126 T 15-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 XDD1_1520 9439799a3cda99ae1f636e9eed701144 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 XDD1_1520 9439799a3cda99ae1f636e9eed701144 383 Gene3D G3DSA:1.20.1090.10 186 383 2.4E-76 T 15-10-2018 XDD1_1520 9439799a3cda99ae1f636e9eed701144 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 260 280 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 XDD1_1520 9439799a3cda99ae1f636e9eed701144 383 Gene3D G3DSA:3.40.50.1970 1 184 1.0E-54 T 15-10-2018 XDD1_1520 9439799a3cda99ae1f636e9eed701144 383 SUPERFAMILY SSF56796 5 382 5.23E-135 T 15-10-2018 XDD1_1593 cb818a1c414ba3e55002cc8bfe542548 404 SUPERFAMILY SSF51690 121 396 3.92E-88 T 15-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 XDD1_1593 cb818a1c414ba3e55002cc8bfe542548 404 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 399 48.337 T 15-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 XDD1_1593 cb818a1c414ba3e55002cc8bfe542548 404 SUPERFAMILY SSF54675 3 139 1.15E-41 T 15-10-2018 XDD1_1593 cb818a1c414ba3e55002cc8bfe542548 404 Gene3D G3DSA:3.20.140.10 1 404 2.3E-164 T 15-10-2018 XDD1_1593 cb818a1c414ba3e55002cc8bfe542548 404 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 398 2.8E-160 T 15-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 XDD1_1593 cb818a1c414ba3e55002cc8bfe542548 404 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 172 398 1.9E-82 T 15-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 XDD1_1593 cb818a1c414ba3e55002cc8bfe542548 404 PIRSF PIRSF000484 1 390 4.0E-62 T 15-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 XDD1_2802 ec7e1cda95756eeb17dc9dce88d56b07 222 SMART SM00471 23 140 9.8E-9 T 15-10-2018 IPR003607 HD/PDEase domain XDD1_2802 ec7e1cda95756eeb17dc9dce88d56b07 222 Pfam PF01966 HD domain 29 129 3.8E-12 T 15-10-2018 IPR006674 HD domain XDD1_2802 ec7e1cda95756eeb17dc9dce88d56b07 222 Gene3D G3DSA:1.10.3210.50 7 222 8.5E-71 T 15-10-2018 XDD1_2802 ec7e1cda95756eeb17dc9dce88d56b07 222 SUPERFAMILY SSF109604 11 213 2.98E-60 T 15-10-2018 XDD1_3670 b94f1b2109a3fd196005d512991973f9 188 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 57 3.7E-11 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XDD1_3670 b94f1b2109a3fd196005d512991973f9 188 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 68 80 3.7E-11 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XDD1_3670 b94f1b2109a3fd196005d512991973f9 188 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 142 157 3.7E-11 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XDD1_3670 b94f1b2109a3fd196005d512991973f9 188 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 29 186 1.7E-49 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XDD1_3670 b94f1b2109a3fd196005d512991973f9 188 SUPERFAMILY SSF50891 25 186 1.61E-57 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily XDD1_3670 b94f1b2109a3fd196005d512991973f9 188 Gene3D G3DSA:2.40.100.10 24 188 2.7E-70 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily XDD1_3670 b94f1b2109a3fd196005d512991973f9 188 PIRSF PIRSF001467 13 186 3.3E-29 T 15-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 XDD1_3670 b94f1b2109a3fd196005d512991973f9 188 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 63 80 - T 15-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 XDD1_3302 8a9cb786e2bac1a315f36ca2ced0e98b 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 46.369 T 15-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XDD1_3302 8a9cb786e2bac1a315f36ca2ced0e98b 398 SUPERFAMILY SSF55347 126 273 2.32E-60 T 15-10-2018 XDD1_3302 8a9cb786e2bac1a315f36ca2ced0e98b 398 SUPERFAMILY SSF69055 301 395 9.29E-31 T 15-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XDD1_3302 8a9cb786e2bac1a315f36ca2ced0e98b 398 Gene3D G3DSA:1.10.1740.10 312 397 2.1E-29 T 15-10-2018 XDD1_3302 8a9cb786e2bac1a315f36ca2ced0e98b 398 SUPERFAMILY SSF51735 2 150 9.57E-48 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_3302 8a9cb786e2bac1a315f36ca2ced0e98b 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 393 8.3E-178 T 15-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XDD1_3302 8a9cb786e2bac1a315f36ca2ced0e98b 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 2.0E-49 T 15-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XDD1_3302 8a9cb786e2bac1a315f36ca2ced0e98b 398 Gene3D G3DSA:3.40.50.720 1 150 4.2E-58 T 15-10-2018 XDD1_3302 8a9cb786e2bac1a315f36ca2ced0e98b 398 PIRSF PIRSF006205 1 398 2.1E-154 T 15-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XDD1_3302 8a9cb786e2bac1a315f36ca2ced0e98b 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 386 7.2E-40 T 15-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XDD1_3302 8a9cb786e2bac1a315f36ca2ced0e98b 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 3.6E-35 T 15-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XDD1_3895 7807aa83a61c7e9c441ef66ca03d7308 252 SMART SM01134 72 233 1.2E-67 T 15-10-2018 XDD1_3895 7807aa83a61c7e9c441ef66ca03d7308 252 Gene3D G3DSA:3.30.750.70 70 133 4.0E-9 T 15-10-2018 XDD1_3895 7807aa83a61c7e9c441ef66ca03d7308 252 SUPERFAMILY SSF100950 74 233 8.76E-29 T 15-10-2018 IPR037171 NagB/RpiA transferase-like XDD1_3895 7807aa83a61c7e9c441ef66ca03d7308 252 SMART SM00420 6 58 2.0E-25 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 XDD1_3895 7807aa83a61c7e9c441ef66ca03d7308 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 XDD1_3895 7807aa83a61c7e9c441ef66ca03d7308 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 5.7E-52 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain XDD1_3895 7807aa83a61c7e9c441ef66ca03d7308 252 Gene3D G3DSA:1.10.10.10 1 58 1.1E-7 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3895 7807aa83a61c7e9c441ef66ca03d7308 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.6E-12 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 XDD1_3895 7807aa83a61c7e9c441ef66ca03d7308 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.6E-12 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 XDD1_3895 7807aa83a61c7e9c441ef66ca03d7308 252 SUPERFAMILY SSF46785 3 74 8.14E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3895 7807aa83a61c7e9c441ef66ca03d7308 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.3E-23 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 XDD1_2749 415702f192517458bd8c2957c0df7dac 289 Pfam PF05065 Phage capsid family 9 284 1.5E-59 T 15-10-2018 IPR024455 Phage capsid XDD1_2749 415702f192517458bd8c2957c0df7dac 289 Gene3D G3DSA:3.30.2320.10 148 250 1.2E-6 T 15-10-2018 XDD1_2749 415702f192517458bd8c2957c0df7dac 289 SUPERFAMILY SSF56563 1 287 2.62E-59 T 15-10-2018 XDD1_2749 415702f192517458bd8c2957c0df7dac 289 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 1 284 1.6E-78 T 15-10-2018 IPR024455 Phage capsid XDD1_1814 a1ba7ce4e2dc85871eaf66b6f8944ed1 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 347 1.4E-165 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 XDD1_1814 a1ba7ce4e2dc85871eaf66b6f8944ed1 348 PIRSF PIRSF001361 1 348 9.4E-156 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 XDD1_1814 a1ba7ce4e2dc85871eaf66b6f8944ed1 348 Pfam PF00793 DAHP synthetase I family 41 335 3.4E-101 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XDD1_1814 a1ba7ce4e2dc85871eaf66b6f8944ed1 348 Gene3D G3DSA:3.20.20.70 1 348 6.4E-154 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_1814 a1ba7ce4e2dc85871eaf66b6f8944ed1 348 SUPERFAMILY SSF51569 7 346 1.0E-130 T 15-10-2018 XDD1_0241 eddbdb946453d84a5a9e409811d3e2fd 349 Pfam PF13551 Winged helix-turn helix 32 88 1.8E-8 T 15-10-2018 XDD1_0241 eddbdb946453d84a5a9e409811d3e2fd 349 Pfam PF13358 DDE superfamily endonuclease 169 313 3.3E-35 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0241 eddbdb946453d84a5a9e409811d3e2fd 349 Pfam PF13592 Winged helix-turn helix 100 155 3.4E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_0241 eddbdb946453d84a5a9e409811d3e2fd 349 Gene3D G3DSA:3.30.420.470 211 342 3.1E-11 T 15-10-2018 XDD1_0241 eddbdb946453d84a5a9e409811d3e2fd 349 SUPERFAMILY SSF53098 222 322 1.08E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0241 eddbdb946453d84a5a9e409811d3e2fd 349 SUPERFAMILY SSF46689 17 131 3.05E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1727 372ff1e3943309ce2d388cf7822afc9f 194 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 186 25.424 T 15-10-2018 IPR022929 Putative manganese efflux pump MntP XDD1_1727 372ff1e3943309ce2d388cf7822afc9f 194 Pfam PF02659 Putative manganese efflux pump 31 183 1.8E-53 T 15-10-2018 IPR003810 Putative manganese efflux pump XDD1_2584 f7036df49f79f4cc882a07c103b718d0 506 Pfam PF00361 Proton-conducting membrane transporter 133 429 2.0E-69 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2584 f7036df49f79f4cc882a07c103b718d0 506 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 495 5.1E-178 T 15-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2584 f7036df49f79f4cc882a07c103b718d0 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 1.8E-37 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2584 f7036df49f79f4cc882a07c103b718d0 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 1.8E-37 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2584 f7036df49f79f4cc882a07c103b718d0 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 1.8E-37 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2584 f7036df49f79f4cc882a07c103b718d0 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 1.8E-37 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2584 f7036df49f79f4cc882a07c103b718d0 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 1.8E-37 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_0315 951757487ca3102110aa52917c64e0e3 183 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 13 49 9.9E-13 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 XDD1_0315 951757487ca3102110aa52917c64e0e3 183 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 62 98 9.3E-17 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 XDD1_0315 951757487ca3102110aa52917c64e0e3 183 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 105 142 7.5E-14 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 XDD1_0315 951757487ca3102110aa52917c64e0e3 183 SUPERFAMILY SSF57783 60 98 4.76E-13 T 15-10-2018 XDD1_0315 951757487ca3102110aa52917c64e0e3 183 SUPERFAMILY SSF57783 14 49 2.04E-11 T 15-10-2018 XDD1_0315 951757487ca3102110aa52917c64e0e3 183 Gene3D G3DSA:3.30.65.10 56 100 9.6E-9 T 15-10-2018 XDD1_0315 951757487ca3102110aa52917c64e0e3 183 Gene3D G3DSA:3.30.65.10 3 55 1.6E-9 T 15-10-2018 XDD1_1662 9e9579a9c3447c9c6083ce7cef3cc07a 468 Gene3D G3DSA:1.20.1740.10 17 467 3.8E-60 T 15-10-2018 XDD1_1662 9e9579a9c3447c9c6083ce7cef3cc07a 468 PIRSF PIRSF006060 2 468 4.9E-73 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XDD1_1662 9e9579a9c3447c9c6083ce7cef3cc07a 468 Pfam PF00324 Amino acid permease 26 464 1.9E-113 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 XDD1_1662 9e9579a9c3447c9c6083ce7cef3cc07a 468 ProSitePatterns PS00218 Amino acid permeases signature. 51 81 - T 15-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 XDD1_1983 275885bbeea47eee85fc3456b633c238 473 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 3.0E-12 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_1983 275885bbeea47eee85fc3456b633c238 473 SMART SM00345 7 66 3.1E-12 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_1983 275885bbeea47eee85fc3456b633c238 473 Gene3D G3DSA:1.10.10.10 1 68 4.6E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1983 275885bbeea47eee85fc3456b633c238 473 SUPERFAMILY SSF46785 1 69 5.94E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1983 275885bbeea47eee85fc3456b633c238 473 Gene3D G3DSA:3.90.1150.10 98 464 3.2E-96 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_1983 275885bbeea47eee85fc3456b633c238 473 SUPERFAMILY SSF53383 95 469 3.23E-86 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_1983 275885bbeea47eee85fc3456b633c238 473 Gene3D G3DSA:3.40.640.10 141 360 3.2E-96 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_1983 275885bbeea47eee85fc3456b633c238 473 Pfam PF00155 Aminotransferase class I and II 147 446 8.1E-20 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XDD1_1210 0f1b964929b08026c80074d39fcc570d 117 SUPERFAMILY SSF50104 2 115 8.52E-49 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily XDD1_1210 0f1b964929b08026c80074d39fcc570d 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 15-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_1210 0f1b964929b08026c80074d39fcc570d 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1210 0f1b964929b08026c80074d39fcc570d 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1210 0f1b964929b08026c80074d39fcc570d 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1210 0f1b964929b08026c80074d39fcc570d 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.129 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1210 0f1b964929b08026c80074d39fcc570d 117 Pfam PF01245 Ribosomal protein L19 3 113 1.9E-50 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1210 0f1b964929b08026c80074d39fcc570d 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 7.4E-54 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1210 0f1b964929b08026c80074d39fcc570d 117 Gene3D G3DSA:2.30.30.790 2 117 1.0E-17 T 15-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_1210 0f1b964929b08026c80074d39fcc570d 117 PIRSF PIRSF002191 1 117 1.6E-51 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_2993 af06c1c4acd745cc1f4aa19713e76d47 217 Pfam PF13673 Acetyltransferase (GNAT) domain 85 182 7.3E-8 T 15-10-2018 IPR000182 GNAT domain XDD1_2993 af06c1c4acd745cc1f4aa19713e76d47 217 SUPERFAMILY SSF55729 78 182 8.43E-10 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_2993 af06c1c4acd745cc1f4aa19713e76d47 217 Gene3D G3DSA:3.40.630.30 68 193 7.7E-11 T 15-10-2018 XDD1_0506 7fba14f328770b28561dc00c9db77e74 772 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 759 2.0E-274 T 15-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 XDD1_0506 7fba14f328770b28561dc00c9db77e74 772 Pfam PF01568 Molydopterin dinucleotide binding domain 647 754 1.1E-9 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 XDD1_0506 7fba14f328770b28561dc00c9db77e74 772 Gene3D G3DSA:3.40.228.10 185 412 1.9E-72 T 15-10-2018 XDD1_0506 7fba14f328770b28561dc00c9db77e74 772 Pfam PF00384 Molybdopterin oxidoreductase 109 516 2.7E-24 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_0506 7fba14f328770b28561dc00c9db77e74 772 SUPERFAMILY SSF50692 638 761 1.31E-16 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily XDD1_0506 7fba14f328770b28561dc00c9db77e74 772 SUPERFAMILY SSF53706 48 632 3.27E-140 T 15-10-2018 XDD1_0506 7fba14f328770b28561dc00c9db77e74 772 PIRSF PIRSF000144 1 765 0.0 T 15-10-2018 XDD1_0506 7fba14f328770b28561dc00c9db77e74 772 Gene3D G3DSA:3.40.50.740 121 598 1.9E-72 T 15-10-2018 XDD1_0506 7fba14f328770b28561dc00c9db77e74 772 Gene3D G3DSA:2.40.40.20 645 772 1.9E-5 T 15-10-2018 XDD1_2124 6c5b322708856115fa7dda8e0cd0276d 292 SUPERFAMILY SSF103481 42 140 2.22E-8 T 15-10-2018 XDD1_2124 6c5b322708856115fa7dda8e0cd0276d 292 SUPERFAMILY SSF103481 188 284 1.15E-11 T 15-10-2018 XDD1_2124 6c5b322708856115fa7dda8e0cd0276d 292 Pfam PF00892 EamA-like transporter family 15 138 2.5E-9 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_2124 6c5b322708856115fa7dda8e0cd0276d 292 Pfam PF00892 EamA-like transporter family 149 280 5.6E-12 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_0722 0672e37590b32e3c0c7e986bfef49574 136 PIRSF PIRSF029225 1 130 1.9E-37 T 15-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_0722 0672e37590b32e3c0c7e986bfef49574 136 Pfam PF03603 DNA polymerase III psi subunit 1 126 1.8E-40 T 15-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_0722 0672e37590b32e3c0c7e986bfef49574 136 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 33 128 4.0E-35 T 15-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_0722 0672e37590b32e3c0c7e986bfef49574 136 SUPERFAMILY SSF102220 27 134 3.66E-29 T 15-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_0722 0672e37590b32e3c0c7e986bfef49574 136 Gene3D G3DSA:3.40.50.10220 32 135 4.5E-32 T 15-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_1325 91ff9cf58c9f0964abfa339068761fcd 945 SUPERFAMILY SSF51445 255 827 1.1E-136 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily XDD1_1325 91ff9cf58c9f0964abfa339068761fcd 945 SUPERFAMILY SSF51011 829 944 3.52E-29 T 15-10-2018 XDD1_1325 91ff9cf58c9f0964abfa339068761fcd 945 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 35 932 0.0 T 15-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 XDD1_1325 91ff9cf58c9f0964abfa339068761fcd 945 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 159 243 4.1E-13 T 15-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 XDD1_1325 91ff9cf58c9f0964abfa339068761fcd 945 Gene3D G3DSA:2.60.40.10 150 257 5.1E-28 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_1325 91ff9cf58c9f0964abfa339068761fcd 945 SUPERFAMILY SSF81296 34 148 1.13E-30 T 15-10-2018 IPR014756 Immunoglobulin E-set XDD1_1325 91ff9cf58c9f0964abfa339068761fcd 945 Pfam PF11852 Domain of unknown function (DUF3372) 767 930 9.1E-46 T 15-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal XDD1_1325 91ff9cf58c9f0964abfa339068761fcd 945 SUPERFAMILY SSF81296 159 262 6.77E-23 T 15-10-2018 IPR014756 Immunoglobulin E-set XDD1_1325 91ff9cf58c9f0964abfa339068761fcd 945 Gene3D G3DSA:2.60.40.1130 35 149 3.0E-36 T 15-10-2018 XDD1_1325 91ff9cf58c9f0964abfa339068761fcd 945 Gene3D G3DSA:2.60.40.1180 837 945 1.5E-30 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta XDD1_1325 91ff9cf58c9f0964abfa339068761fcd 945 Gene3D G3DSA:3.20.20.80 258 836 1.3E-186 T 15-10-2018 XDD1_0218 4bf65b3b347b3e8d6d675b7801ed3a69 408 SUPERFAMILY SSF69864 176 402 9.03E-87 T 15-10-2018 XDD1_0218 4bf65b3b347b3e8d6d675b7801ed3a69 408 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 11 19 - T 15-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XDD1_0218 4bf65b3b347b3e8d6d675b7801ed3a69 408 TIGRFAM TIGR00032 argG: argininosuccinate synthase 7 395 3.0E-132 T 15-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XDD1_0218 4bf65b3b347b3e8d6d675b7801ed3a69 408 SUPERFAMILY SSF52402 6 171 1.3E-44 T 15-10-2018 XDD1_0218 4bf65b3b347b3e8d6d675b7801ed3a69 408 Pfam PF00764 Arginosuccinate synthase 9 396 4.6E-140 T 15-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XDD1_0218 4bf65b3b347b3e8d6d675b7801ed3a69 408 Gene3D G3DSA:3.40.50.620 6 177 6.9E-62 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_0218 4bf65b3b347b3e8d6d675b7801ed3a69 408 Gene3D G3DSA:3.90.1260.10 179 405 2.0E-86 T 15-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XDD1_0218 4bf65b3b347b3e8d6d675b7801ed3a69 408 Hamap MF_00005 Argininosuccinate synthase [argG]. 5 402 50.534 T 15-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XDD1_0218 4bf65b3b347b3e8d6d675b7801ed3a69 408 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 15-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XDD1_2558 5f803f98a4b2d08d7b89fadbefc2fb3e 246 Gene3D G3DSA:3.40.50.150 22 246 4.5E-76 T 15-10-2018 XDD1_2558 5f803f98a4b2d08d7b89fadbefc2fb3e 246 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 22 240 9.3E-89 T 15-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 XDD1_2558 5f803f98a4b2d08d7b89fadbefc2fb3e 246 SUPERFAMILY SSF53335 7 233 2.37E-45 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_2558 5f803f98a4b2d08d7b89fadbefc2fb3e 246 Pfam PF13489 Methyltransferase domain 63 206 1.7E-23 T 15-10-2018 XDD1_2558 5f803f98a4b2d08d7b89fadbefc2fb3e 246 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 22 246 37.094 T 15-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 XDD1_1297 d9336bda9d4d62641cde44a0a5477a47 385 SUPERFAMILY SSF51338 1 53 1.51E-17 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XDD1_1297 d9336bda9d4d62641cde44a0a5477a47 385 Pfam PF01979 Amidohydrolase family 51 381 3.3E-41 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 XDD1_1297 d9336bda9d4d62641cde44a0a5477a47 385 SUPERFAMILY SSF51556 54 353 3.4E-97 T 15-10-2018 IPR032466 Metal-dependent hydrolase XDD1_1297 d9336bda9d4d62641cde44a0a5477a47 385 Gene3D G3DSA:2.30.40.10 8 379 1.9E-130 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XDD1_1297 d9336bda9d4d62641cde44a0a5477a47 385 PIRSF PIRSF038994 1 384 7.6E-116 T 15-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 XDD1_1297 d9336bda9d4d62641cde44a0a5477a47 385 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 380 1.8E-154 T 15-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 XDD1_1297 d9336bda9d4d62641cde44a0a5477a47 385 Gene3D G3DSA:3.20.20.140 55 347 1.9E-130 T 15-10-2018 XDD1_3781 4e1ac0966c9968d7cd44ca7f1565c424 396 Pfam PF07690 Major Facilitator Superfamily 27 216 5.2E-18 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_3781 4e1ac0966c9968d7cd44ca7f1565c424 396 SUPERFAMILY SSF103473 23 387 5.49E-38 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_3781 4e1ac0966c9968d7cd44ca7f1565c424 396 Gene3D G3DSA:1.20.1250.20 20 386 1.2E-31 T 15-10-2018 XDD1_3781 4e1ac0966c9968d7cd44ca7f1565c424 396 Pfam PF05977 Transmembrane secretion effector 330 387 1.9E-5 T 15-10-2018 IPR010290 Transmembrane secretion effector XDD1_2216 5d0cfada3b9cdd9974deed5ed663fef8 192 Gene3D G3DSA:3.40.50.880 1 192 1.8E-58 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_2216 5d0cfada3b9cdd9974deed5ed663fef8 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.3E-5 T 15-10-2018 XDD1_2216 5d0cfada3b9cdd9974deed5ed663fef8 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.3E-5 T 15-10-2018 XDD1_2216 5d0cfada3b9cdd9974deed5ed663fef8 192 Pfam PF00117 Glutamine amidotransferase class-I 6 186 2.5E-45 T 15-10-2018 IPR017926 Glutamine amidotransferase XDD1_2216 5d0cfada3b9cdd9974deed5ed663fef8 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 187 6.5E-52 T 15-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XDD1_2216 5d0cfada3b9cdd9974deed5ed663fef8 192 SUPERFAMILY SSF52317 2 190 1.7E-46 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_2216 5d0cfada3b9cdd9974deed5ed663fef8 192 PRINTS PR00097 Anthranilate synthase component II signature 166 179 3.1E-34 T 15-10-2018 XDD1_2216 5d0cfada3b9cdd9974deed5ed663fef8 192 PRINTS PR00097 Anthranilate synthase component II signature 52 61 3.1E-34 T 15-10-2018 XDD1_2216 5d0cfada3b9cdd9974deed5ed663fef8 192 PRINTS PR00097 Anthranilate synthase component II signature 124 136 3.1E-34 T 15-10-2018 XDD1_2216 5d0cfada3b9cdd9974deed5ed663fef8 192 PRINTS PR00097 Anthranilate synthase component II signature 104 112 3.1E-34 T 15-10-2018 XDD1_2216 5d0cfada3b9cdd9974deed5ed663fef8 192 PRINTS PR00097 Anthranilate synthase component II signature 4 18 3.1E-34 T 15-10-2018 XDD1_2216 5d0cfada3b9cdd9974deed5ed663fef8 192 PRINTS PR00097 Anthranilate synthase component II signature 79 90 3.1E-34 T 15-10-2018 XDD1_2216 5d0cfada3b9cdd9974deed5ed663fef8 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 8.7E-14 T 15-10-2018 XDD1_2216 5d0cfada3b9cdd9974deed5ed663fef8 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 8.7E-14 T 15-10-2018 XDD1_2216 5d0cfada3b9cdd9974deed5ed663fef8 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 8.7E-14 T 15-10-2018 XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 Gene3D G3DSA:3.30.559.30 230 476 5.2E-158 T 15-10-2018 XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 SUPERFAMILY SSF52777 38 246 4.11E-50 T 15-10-2018 XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1762 1773 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 SUPERFAMILY SSF56801 470 1044 3.14E-167 T 15-10-2018 XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 SUPERFAMILY SSF52777 1143 1337 1.33E-34 T 15-10-2018 XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 SUPERFAMILY SSF52777 234 498 1.78E-67 T 15-10-2018 XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 Gene3D G3DSA:3.30.559.30 1323 1590 7.7E-87 T 15-10-2018 XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 Pfam PF00668 Condensation domain 1145 1594 6.4E-54 T 15-10-2018 IPR001242 Condensation domain XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 Pfam PF00668 Condensation domain 45 491 2.4E-112 T 15-10-2018 IPR001242 Condensation domain XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 Gene3D G3DSA:3.40.50.1820 2122 2227 6.2E-23 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 Pfam PF13193 AMP-binding enzyme C-terminal domain 2029 2104 1.6E-13 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 Pfam PF13193 AMP-binding enzyme C-terminal domain 929 1004 4.3E-13 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 Gene3D G3DSA:3.30.300.30 2016 2121 3.3E-37 T 15-10-2018 XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 Gene3D G3DSA:3.30.300.30 916 1019 2.0E-37 T 15-10-2018 XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 Pfam PF00550 Phosphopantetheine attachment site 1034 1094 2.0E-8 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 Pfam PF00550 Phosphopantetheine attachment site 2134 2190 1.7E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 Gene3D G3DSA:3.30.559.10 1151 1524 7.7E-87 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 ProSitePatterns PS00455 Putative AMP-binding domain signature. 663 674 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 SUPERFAMILY SSF47336 1024 1095 9.16E-16 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 SUPERFAMILY SSF56801 1572 2144 2.75E-166 T 15-10-2018 XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 Gene3D G3DSA:3.30.559.10 46 420 5.2E-158 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2155 2170 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1635 2045 2.5E-138 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 532 945 9.4E-139 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 SUPERFAMILY SSF52777 1325 1601 1.11E-45 T 15-10-2018 XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 Gene3D G3DSA:3.40.50.12780 501 913 1.7E-148 T 15-10-2018 XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 Gene3D G3DSA:3.40.50.12780 1604 2013 3.0E-148 T 15-10-2018 XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 Gene3D G3DSA:1.10.1200.10 1020 1101 6.6E-20 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 SUPERFAMILY SSF47336 2123 2196 3.27E-17 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 Pfam PF00501 AMP-binding enzyme 511 921 1.6E-105 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2287 d2492925b3e9f285f28c13a746c8f7d5 2239 Pfam PF00501 AMP-binding enzyme 1615 2021 2.9E-106 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_3767 27598c31d570251296ece8534cae9666 557 Gene3D G3DSA:2.40.160.50 181 549 5.2E-67 T 15-10-2018 XDD1_3767 27598c31d570251296ece8534cae9666 557 PIRSF PIRSF029745 1 557 5.3E-119 T 15-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 XDD1_3767 27598c31d570251296ece8534cae9666 557 Gene3D G3DSA:3.10.20.310 64 152 4.1E-9 T 15-10-2018 XDD1_3767 27598c31d570251296ece8534cae9666 557 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 209 517 5.5E-97 T 15-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal XDD1_3767 27598c31d570251296ece8534cae9666 557 Pfam PF17287 POTRA domain 154 204 8.9E-14 T 15-10-2018 IPR035251 ShlB, POTRA domain XDD1_3767 27598c31d570251296ece8534cae9666 557 Pfam PF08479 POTRA domain, ShlB-type 79 152 8.5E-22 T 15-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type XDD1_1548 dd27fc64c0b3abdc75892f6b7e786ee3 81 Gene3D G3DSA:2.40.50.140 2 65 1.1E-25 T 15-10-2018 XDD1_1548 dd27fc64c0b3abdc75892f6b7e786ee3 81 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 2.7E-28 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XDD1_1548 dd27fc64c0b3abdc75892f6b7e786ee3 81 SUPERFAMILY SSF50249 1 66 2.69E-22 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_1548 dd27fc64c0b3abdc75892f6b7e786ee3 81 PIRSF PIRSF002599 1 80 1.6E-22 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 XDD1_1548 dd27fc64c0b3abdc75892f6b7e786ee3 81 SMART SM00357 3 67 4.9E-27 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 XDD1_1548 dd27fc64c0b3abdc75892f6b7e786ee3 81 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 15-10-2018 IPR019844 Cold-shock conserved site XDD1_1548 dd27fc64c0b3abdc75892f6b7e786ee3 81 PRINTS PR00050 Cold shock protein signature 40 58 1.6E-15 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XDD1_1548 dd27fc64c0b3abdc75892f6b7e786ee3 81 PRINTS PR00050 Cold shock protein signature 4 19 1.6E-15 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XDD1_1548 dd27fc64c0b3abdc75892f6b7e786ee3 81 PRINTS PR00050 Cold shock protein signature 25 34 1.6E-15 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XDD1_1548 dd27fc64c0b3abdc75892f6b7e786ee3 81 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 3.5E-40 T 15-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 XDD1_2500 1da2f15db3c7c427adc20248112bd4e2 275 ProSitePatterns PS00770 Aminotransferases class-IV signature. 174 203 - T 15-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 XDD1_2500 1da2f15db3c7c427adc20248112bd4e2 275 Pfam PF01063 Amino-transferase class IV 25 248 1.3E-45 T 15-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 XDD1_2500 1da2f15db3c7c427adc20248112bd4e2 275 Gene3D G3DSA:3.30.470.10 2 109 6.6E-28 T 15-10-2018 XDD1_2500 1da2f15db3c7c427adc20248112bd4e2 275 SUPERFAMILY SSF56752 3 251 1.57E-64 T 15-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 XDD1_2500 1da2f15db3c7c427adc20248112bd4e2 275 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 4 268 2.0E-106 T 15-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 XDD1_2500 1da2f15db3c7c427adc20248112bd4e2 275 Gene3D G3DSA:3.20.10.10 122 272 2.2E-51 T 15-10-2018 XDD1_3345 08a5695dd5a5fe9735de32026c1f1cb9 260 Gene3D G3DSA:3.40.50.720 6 259 4.8E-85 T 15-10-2018 XDD1_3345 08a5695dd5a5fe9735de32026c1f1cb9 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.4E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3345 08a5695dd5a5fe9735de32026c1f1cb9 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.4E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3345 08a5695dd5a5fe9735de32026c1f1cb9 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.4E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3345 08a5695dd5a5fe9735de32026c1f1cb9 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 257 1.0E-56 T 15-10-2018 XDD1_3345 08a5695dd5a5fe9735de32026c1f1cb9 260 TIGRFAM TIGR02415 23BDH: acetoin reductases 7 260 2.4E-103 T 15-10-2018 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00650+1.1.1.304|MetaCyc: PWY-6389 XDD1_3345 08a5695dd5a5fe9735de32026c1f1cb9 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XDD1_3345 08a5695dd5a5fe9735de32026c1f1cb9 260 SUPERFAMILY SSF51735 5 258 1.76E-76 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_3345 08a5695dd5a5fe9735de32026c1f1cb9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.4E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3345 08a5695dd5a5fe9735de32026c1f1cb9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.4E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3345 08a5695dd5a5fe9735de32026c1f1cb9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.4E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3345 08a5695dd5a5fe9735de32026c1f1cb9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.4E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3345 08a5695dd5a5fe9735de32026c1f1cb9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_3345 08a5695dd5a5fe9735de32026c1f1cb9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.4E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2728 e69c17b487c8533bed4eb333a1e9b256 276 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 18 127 2.6E-23 T 15-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 XDD1_2728 e69c17b487c8533bed4eb333a1e9b256 276 SUPERFAMILY SSF51695 15 266 7.74E-47 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 XDD1_2728 e69c17b487c8533bed4eb333a1e9b256 276 Gene3D G3DSA:3.20.20.190 16 232 3.0E-44 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 XDD1_1315 08d12d605060716d3d8af01aa2ab985d 217 Pfam PF14103 Domain of unknown function (DUF4276) 8 210 7.9E-58 T 15-10-2018 IPR025455 Protein of unknown function DUF4276 XDD1_2591 5b7035802128d99e08ecad634ea9be6e 459 Gene3D G3DSA:3.40.50.11540 65 243 1.8E-78 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2591 5b7035802128d99e08ecad634ea9be6e 459 Pfam PF10531 SLBB domain 261 303 5.6E-7 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2591 5b7035802128d99e08ecad634ea9be6e 459 Gene3D G3DSA:3.10.20.600 248 341 1.3E-28 T 15-10-2018 XDD1_2591 5b7035802128d99e08ecad634ea9be6e 459 SMART SM00928 344 389 6.5E-22 T 15-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2591 5b7035802128d99e08ecad634ea9be6e 459 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 19 431 4.8E-200 T 15-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2591 5b7035802128d99e08ecad634ea9be6e 459 Gene3D G3DSA:1.20.1440.230 342 441 7.2E-28 T 15-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2591 5b7035802128d99e08ecad634ea9be6e 459 SUPERFAMILY SSF142984 256 338 5.49E-22 T 15-10-2018 XDD1_2591 5b7035802128d99e08ecad634ea9be6e 459 SUPERFAMILY SSF140490 341 437 9.15E-32 T 15-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2591 5b7035802128d99e08ecad634ea9be6e 459 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 347 429 9.2E-27 T 15-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2591 5b7035802128d99e08ecad634ea9be6e 459 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 60 232 1.7E-50 T 15-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2591 5b7035802128d99e08ecad634ea9be6e 459 SUPERFAMILY SSF142019 18 246 3.92E-85 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2591 5b7035802128d99e08ecad634ea9be6e 459 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 180 195 - T 15-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2591 5b7035802128d99e08ecad634ea9be6e 459 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 357 368 - T 15-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_3283 eaaea9d52753eaab586d4149d627fa21 235 Gene3D G3DSA:3.30.2310.10 148 231 4.1E-21 T 15-10-2018 XDD1_3283 eaaea9d52753eaab586d4149d627fa21 235 SUPERFAMILY SSF118196 2 230 1.31E-85 T 15-10-2018 IPR036413 YaeB-like superfamily XDD1_3283 eaaea9d52753eaab586d4149d627fa21 235 Gene3D G3DSA:2.40.30.70 24 147 3.5E-48 T 15-10-2018 IPR036414 YaeB, N-terminal domain superfamily XDD1_3283 eaaea9d52753eaab586d4149d627fa21 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 7.8E-40 T 15-10-2018 IPR023370 YaeB-like, N-terminal domain XDD1_3283 eaaea9d52753eaab586d4149d627fa21 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 149 6.6E-57 T 15-10-2018 IPR023370 YaeB-like, N-terminal domain XDD1_3283 eaaea9d52753eaab586d4149d627fa21 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 15-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site XDD1_1542 dc68b3ed3c29aca016efacd05f10da10 245 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 47 60 - T 15-10-2018 IPR018313 Solute-binding protein family 3, conserved site XDD1_1542 dc68b3ed3c29aca016efacd05f10da10 245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 244 3.3E-72 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XDD1_1542 dc68b3ed3c29aca016efacd05f10da10 245 SMART SM00062 24 244 2.2E-86 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF XDD1_1542 dc68b3ed3c29aca016efacd05f10da10 245 SMART SM00079 24 245 2.3E-4 T 15-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 XDD1_1542 dc68b3ed3c29aca016efacd05f10da10 245 SUPERFAMILY SSF53850 1 244 5.15E-75 T 15-10-2018 XDD1_1542 dc68b3ed3c29aca016efacd05f10da10 245 Gene3D G3DSA:3.40.190.10 27 242 3.7E-84 T 15-10-2018 XDD1_1542 dc68b3ed3c29aca016efacd05f10da10 245 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 243 1.1E-87 T 15-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 XDD1_1542 dc68b3ed3c29aca016efacd05f10da10 245 Gene3D G3DSA:3.40.190.10 110 203 3.7E-84 T 15-10-2018 XDD1_3537 ce001f0ec09ff259db18ff24b7450144 135 SUPERFAMILY SSF143100 1 63 3.27E-16 T 15-10-2018 IPR035069 TTHA1013/TTHA0281-like XDD1_3537 ce001f0ec09ff259db18ff24b7450144 135 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 128 1.0E-30 T 15-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system XDD1_3537 ce001f0ec09ff259db18ff24b7450144 135 Gene3D G3DSA:3.30.160.250 1 85 5.4E-20 T 15-10-2018 XDD1_3537 ce001f0ec09ff259db18ff24b7450144 135 Gene3D G3DSA:1.10.1220.10 99 134 8.5E-6 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 XDD1_0015 17a20b9cf756e0613cde6363fa491247 482 Gene3D G3DSA:3.50.50.60 1 245 5.3E-55 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0015 17a20b9cf756e0613cde6363fa491247 482 Gene3D G3DSA:3.50.50.60 313 447 3.4E-5 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0015 17a20b9cf756e0613cde6363fa491247 482 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 175 199 3.2E-5 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XDD1_0015 17a20b9cf756e0613cde6363fa491247 482 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 3.2E-5 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XDD1_0015 17a20b9cf756e0613cde6363fa491247 482 Pfam PF00743 Flavin-binding monooxygenase-like 7 344 5.3E-15 T 15-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 XDD1_0015 17a20b9cf756e0613cde6363fa491247 482 SUPERFAMILY SSF51905 1 388 1.3E-52 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_3481 e59e9f89b46b8c9a47d0c51c75637711 673 Gene3D G3DSA:3.40.50.720 376 667 7.5E-120 T 15-10-2018 XDD1_3481 e59e9f89b46b8c9a47d0c51c75637711 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 5.8E-12 T 15-10-2018 XDD1_3481 e59e9f89b46b8c9a47d0c51c75637711 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 619 635 5.8E-12 T 15-10-2018 XDD1_3481 e59e9f89b46b8c9a47d0c51c75637711 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 498 516 5.8E-12 T 15-10-2018 XDD1_3481 e59e9f89b46b8c9a47d0c51c75637711 673 SUPERFAMILY SSF51905 468 628 3.2E-23 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_3481 e59e9f89b46b8c9a47d0c51c75637711 673 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 3.7E-88 T 15-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 XDD1_3481 e59e9f89b46b8c9a47d0c51c75637711 673 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 645 4.6E-27 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XDD1_3481 e59e9f89b46b8c9a47d0c51c75637711 673 SUPERFAMILY SSF51395 3 363 1.81E-109 T 15-10-2018 XDD1_3481 e59e9f89b46b8c9a47d0c51c75637711 673 Gene3D G3DSA:3.20.20.70 3 369 1.9E-122 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_3481 e59e9f89b46b8c9a47d0c51c75637711 673 Gene3D G3DSA:3.50.50.60 470 626 7.5E-120 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_3481 e59e9f89b46b8c9a47d0c51c75637711 673 SUPERFAMILY SSF51971 334 522 1.18E-42 T 15-10-2018 XDD1_3673 1db23a271dcfc98a4a65097c6c6713cc 207 Pfam PF01323 DSBA-like thioredoxin domain 40 179 7.7E-22 T 15-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 XDD1_3673 1db23a271dcfc98a4a65097c6c6713cc 207 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XDD1_3673 1db23a271dcfc98a4a65097c6c6713cc 207 Gene3D G3DSA:3.40.30.10 24 207 6.3E-50 T 15-10-2018 XDD1_3673 1db23a271dcfc98a4a65097c6c6713cc 207 PIRSF PIRSF001488 1 207 2.4E-77 T 15-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL XDD1_3673 1db23a271dcfc98a4a65097c6c6713cc 207 SUPERFAMILY SSF52833 22 205 8.39E-41 T 15-10-2018 IPR036249 Thioredoxin-like superfamily XDD1_3666 aa29baae39e963ca2ed029165fc0e90e 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 4.9E-29 T 15-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 XDD1_3666 aa29baae39e963ca2ed029165fc0e90e 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 4.9E-29 T 15-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 XDD1_3666 aa29baae39e963ca2ed029165fc0e90e 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 4.9E-29 T 15-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 XDD1_3666 aa29baae39e963ca2ed029165fc0e90e 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 4.9E-29 T 15-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 XDD1_3666 aa29baae39e963ca2ed029165fc0e90e 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 8.8E-73 T 15-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 XDD1_3666 aa29baae39e963ca2ed029165fc0e90e 289 Gene3D G3DSA:3.40.50.300 1 289 2.4E-114 T 15-10-2018 XDD1_3666 aa29baae39e963ca2ed029165fc0e90e 289 SUPERFAMILY SSF52540 4 286 1.24E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3666 aa29baae39e963ca2ed029165fc0e90e 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 15-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 XDD1_0649 51a5cbbd14cb50df904cbcbdb4607181 342 Pfam PF13353 4Fe-4S single cluster domain 111 182 2.8E-6 T 15-10-2018 XDD1_0649 51a5cbbd14cb50df904cbcbdb4607181 342 SUPERFAMILY SSF102114 102 321 1.16E-26 T 15-10-2018 XDD1_0649 51a5cbbd14cb50df904cbcbdb4607181 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 335 2.0E-160 T 15-10-2018 IPR022462 Lysine-2,3-aminomutase-like XDD1_0649 51a5cbbd14cb50df904cbcbdb4607181 342 Gene3D G3DSA:3.20.20.70 51 334 2.0E-90 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_0649 51a5cbbd14cb50df904cbcbdb4607181 342 Pfam PF04055 Radical SAM superfamily 118 219 4.9E-7 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XDD1_0649 51a5cbbd14cb50df904cbcbdb4607181 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 4 328 7.0E-135 T 15-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase XDD1_0649 51a5cbbd14cb50df904cbcbdb4607181 342 PIRSF PIRSF004911 4 342 6.1E-116 T 15-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase XDD1_2303 67de0cd4294cfb81bec2694fbd49297c 124 Gene3D G3DSA:1.20.58.380 2 110 2.0E-32 T 15-10-2018 XDD1_2303 67de0cd4294cfb81bec2694fbd49297c 124 Pfam PF05400 Flagellar protein FliT 21 106 5.1E-19 T 15-10-2018 IPR008622 Flagellar protein FliT XDD1_0710 fde0d384f7e64dee01b0c55eafa76a1d 232 Gene3D G3DSA:3.40.50.1860 106 213 9.7E-74 T 15-10-2018 XDD1_0710 fde0d384f7e64dee01b0c55eafa76a1d 232 SUPERFAMILY SSF53681 119 224 3.53E-22 T 15-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 XDD1_0710 fde0d384f7e64dee01b0c55eafa76a1d 232 Gene3D G3DSA:3.40.50.1860 5 219 9.7E-74 T 15-10-2018 XDD1_0710 fde0d384f7e64dee01b0c55eafa76a1d 232 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 224 4.5E-55 T 15-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 XDD1_0710 fde0d384f7e64dee01b0c55eafa76a1d 232 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 221 6.0E-58 T 15-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 XDD1_0710 fde0d384f7e64dee01b0c55eafa76a1d 232 SUPERFAMILY SSF53681 3 116 9.03E-35 T 15-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 XDD1_3170 62dc4a274bfec11493cfcd28545d0981 463 Pfam PF13241 Putative NAD(P)-binding 6 115 2.2E-27 T 15-10-2018 XDD1_3170 62dc4a274bfec11493cfcd28545d0981 463 Gene3D G3DSA:3.40.1010.10 215 331 1.6E-45 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 XDD1_3170 62dc4a274bfec11493cfcd28545d0981 463 SUPERFAMILY SSF53790 212 457 7.98E-80 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 XDD1_3170 62dc4a274bfec11493cfcd28545d0981 463 Gene3D G3DSA:1.10.8.210 149 211 2.9E-16 T 15-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 XDD1_3170 62dc4a274bfec11493cfcd28545d0981 463 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 9.2E-79 T 15-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 XDD1_3170 62dc4a274bfec11493cfcd28545d0981 463 Gene3D G3DSA:3.30.160.110 113 148 6.8E-18 T 15-10-2018 XDD1_3170 62dc4a274bfec11493cfcd28545d0981 463 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 9.3E-50 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 XDD1_3170 62dc4a274bfec11493cfcd28545d0981 463 Gene3D G3DSA:3.30.950.10 332 461 2.0E-45 T 15-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 XDD1_3170 62dc4a274bfec11493cfcd28545d0981 463 Gene3D G3DSA:3.40.50.720 1 112 3.3E-33 T 15-10-2018 XDD1_3170 62dc4a274bfec11493cfcd28545d0981 463 SUPERFAMILY SSF75615 114 209 5.36E-28 T 15-10-2018 XDD1_3170 62dc4a274bfec11493cfcd28545d0981 463 Pfam PF14824 Sirohaem biosynthesis protein central 124 145 3.2E-7 T 15-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 XDD1_3170 62dc4a274bfec11493cfcd28545d0981 463 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 1.6E-23 T 15-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 XDD1_3170 62dc4a274bfec11493cfcd28545d0981 463 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 449 1.7E-90 T 15-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 XDD1_3170 62dc4a274bfec11493cfcd28545d0981 463 PIRSF PIRSF036426 1 461 5.9E-200 T 15-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 XDD1_3170 62dc4a274bfec11493cfcd28545d0981 463 SUPERFAMILY SSF51735 2 112 4.2E-24 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_3170 62dc4a274bfec11493cfcd28545d0981 463 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 15-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 XDD1_3170 62dc4a274bfec11493cfcd28545d0981 463 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 15-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 XDD1_3170 62dc4a274bfec11493cfcd28545d0981 463 Hamap MF_01646 Siroheme synthase [cysG]. 1 458 51.668 T 15-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 XDD1_0138 e941e33b63497bcd6a78d2b9dabec63a 366 Pfam PF00534 Glycosyl transferases group 1 194 348 6.5E-24 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 XDD1_0138 e941e33b63497bcd6a78d2b9dabec63a 366 Gene3D G3DSA:3.40.50.2000 183 352 2.7E-43 T 15-10-2018 XDD1_0138 e941e33b63497bcd6a78d2b9dabec63a 366 Gene3D G3DSA:3.40.50.2000 15 361 2.7E-43 T 15-10-2018 XDD1_0138 e941e33b63497bcd6a78d2b9dabec63a 366 Pfam PF13439 Glycosyltransferase Family 4 15 186 1.0E-13 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XDD1_0138 e941e33b63497bcd6a78d2b9dabec63a 366 SUPERFAMILY SSF53756 5 365 6.28E-53 T 15-10-2018 XDD1_2338 7cdcbefd99fb288114b0fbf17ec91141 136 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 90 133 1.4E-11 T 15-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain XDD1_2338 7cdcbefd99fb288114b0fbf17ec91141 136 Pfam PF00460 Flagella basal body rod protein 9 38 1.7E-8 T 15-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 XDD1_2338 7cdcbefd99fb288114b0fbf17ec91141 136 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 15-10-2018 IPR019776 Flagellar basal body rod protein, conserved site XDD1_2338 7cdcbefd99fb288114b0fbf17ec91141 136 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 6 136 8.6E-53 T 15-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 XDD1_3616 32af5d9e722d202326a37f55ca14df4c 234 Gene3D G3DSA:3.20.20.70 16 217 1.7E-62 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_3616 32af5d9e722d202326a37f55ca14df4c 234 Pfam PF02581 Thiamine monophosphate synthase 30 198 2.8E-56 T 15-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XDD1_3616 32af5d9e722d202326a37f55ca14df4c 234 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 11 216 20.482 T 15-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XDD1_3616 32af5d9e722d202326a37f55ca14df4c 234 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 29 211 2.9E-57 T 15-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XDD1_3616 32af5d9e722d202326a37f55ca14df4c 234 SUPERFAMILY SSF51391 14 214 1.7E-64 T 15-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XDD1_2537 6dd77fec78ad383020371457d9f78703 396 Pfam PF07690 Major Facilitator Superfamily 16 358 4.2E-47 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_2537 6dd77fec78ad383020371457d9f78703 396 Gene3D G3DSA:1.20.1720.10 11 389 1.9E-101 T 15-10-2018 XDD1_2537 6dd77fec78ad383020371457d9f78703 396 SUPERFAMILY SSF103473 9 390 2.88E-65 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_2537 6dd77fec78ad383020371457d9f78703 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 11 389 1.6E-132 T 15-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 XDD1_0146 a5c073df568b4ea0a937a959b470edfa 312 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 310 2.0E-136 T 15-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 XDD1_0146 a5c073df568b4ea0a937a959b470edfa 312 SUPERFAMILY SSF51735 1 308 3.73E-65 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0146 a5c073df568b4ea0a937a959b470edfa 312 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 311 49.587 T 15-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 XDD1_0146 a5c073df568b4ea0a937a959b470edfa 312 Gene3D G3DSA:3.40.50.720 3 304 9.9E-122 T 15-10-2018 XDD1_0146 a5c073df568b4ea0a937a959b470edfa 312 Gene3D G3DSA:3.90.25.10 168 292 9.9E-122 T 15-10-2018 XDD1_0146 a5c073df568b4ea0a937a959b470edfa 312 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 5.0E-47 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 XDD1_1861 b97b78d09a268774db624fa9a1ec7561 135 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 15-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 XDD1_1861 b97b78d09a268774db624fa9a1ec7561 135 Gene3D G3DSA:3.10.180.10 1 132 4.2E-49 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XDD1_1861 b97b78d09a268774db624fa9a1ec7561 135 SUPERFAMILY SSF54593 1 127 5.64E-34 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XDD1_1861 b97b78d09a268774db624fa9a1ec7561 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 2.7E-67 T 15-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 XDD1_1861 b97b78d09a268774db624fa9a1ec7561 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 15-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 XDD1_1861 b97b78d09a268774db624fa9a1ec7561 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 8.8E-25 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain XDD1_1670 bab866d96a4dc4285997d992d84babe1 297 Gene3D G3DSA:1.10.10.10 5 91 8.4E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1670 bab866d96a4dc4285997d992d84babe1 297 SUPERFAMILY SSF46785 6 112 8.71E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1670 bab866d96a4dc4285997d992d84babe1 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 6.6E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_1670 bab866d96a4dc4285997d992d84babe1 297 SUPERFAMILY SSF53850 92 286 1.28E-27 T 15-10-2018 XDD1_1670 bab866d96a4dc4285997d992d84babe1 297 Gene3D G3DSA:3.40.190.10 93 282 8.3E-25 T 15-10-2018 XDD1_1670 bab866d96a4dc4285997d992d84babe1 297 Gene3D G3DSA:3.40.190.10 163 258 8.3E-25 T 15-10-2018 XDD1_1670 bab866d96a4dc4285997d992d84babe1 297 Pfam PF03466 LysR substrate binding domain 90 284 1.2E-22 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_0086 09744b3b10f96a28112897764ec59d38 376 SUPERFAMILY SSF56801 48 337 1.12E-5 T 15-10-2018 XDD1_0086 09744b3b10f96a28112897764ec59d38 376 Gene3D G3DSA:3.40.50.12780 19 357 4.7E-18 T 15-10-2018 XDD1_0086 09744b3b10f96a28112897764ec59d38 376 Pfam PF04443 Acyl-protein synthetase, LuxE 23 371 3.6E-23 T 15-10-2018 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723 XDD1_0086 09744b3b10f96a28112897764ec59d38 376 PIRSF PIRSF016580 1 376 1.7E-121 T 15-10-2018 IPR016671 Acyl-protein synthetase, LuxE, bacterial GO:0008218|GO:0047474 MetaCyc: PWY-7723 XDD1_2321 257749f44f0e3fb339ac2b30cf352320 264 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 239 251 - T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 XDD1_2321 257749f44f0e3fb339ac2b30cf352320 264 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 122 134 6.5E-30 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 XDD1_2321 257749f44f0e3fb339ac2b30cf352320 264 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 184 196 6.5E-30 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 XDD1_2321 257749f44f0e3fb339ac2b30cf352320 264 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 252 262 6.5E-30 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 XDD1_2321 257749f44f0e3fb339ac2b30cf352320 264 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 134 148 6.5E-30 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 XDD1_2321 257749f44f0e3fb339ac2b30cf352320 264 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 162 174 6.5E-30 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 XDD1_2321 257749f44f0e3fb339ac2b30cf352320 264 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 62 71 6.5E-30 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 XDD1_2321 257749f44f0e3fb339ac2b30cf352320 264 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 66 262 7.4E-93 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 XDD1_2321 257749f44f0e3fb339ac2b30cf352320 264 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 191 206 - T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 XDD1_2321 257749f44f0e3fb339ac2b30cf352320 264 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 83 103 6.3E-67 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 XDD1_2321 257749f44f0e3fb339ac2b30cf352320 264 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 64 83 6.3E-67 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 XDD1_2321 257749f44f0e3fb339ac2b30cf352320 264 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 103 122 6.3E-67 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 XDD1_2321 257749f44f0e3fb339ac2b30cf352320 264 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 212 233 6.3E-67 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 XDD1_2321 257749f44f0e3fb339ac2b30cf352320 264 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 236 261 6.3E-67 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 XDD1_2321 257749f44f0e3fb339ac2b30cf352320 264 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 191 211 6.3E-67 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 XDD1_2321 257749f44f0e3fb339ac2b30cf352320 264 Pfam PF00813 FliP family 67 258 2.3E-80 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 XDD1_0652 05ed5fc2b03f8135f83f037c46130cab 70 Pfam PF13693 Winged helix-turn-helix DNA-binding 5 69 1.2E-33 T 15-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain XDD1_0652 05ed5fc2b03f8135f83f037c46130cab 70 SUPERFAMILY SSF47413 3 69 9.56E-29 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_0652 05ed5fc2b03f8135f83f037c46130cab 70 Gene3D G3DSA:1.10.260.40 1 70 9.5E-35 T 15-10-2018 XDD1_2184 2c417d7411f248442c2c7416e44cf271 326 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 10 320 4.0E-107 T 15-10-2018 IPR016833 Putative sodium bile acid cotransporter XDD1_2184 2c417d7411f248442c2c7416e44cf271 326 Gene3D G3DSA:1.20.1530.20 7 326 1.2E-35 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily XDD1_2184 2c417d7411f248442c2c7416e44cf271 326 PIRSF PIRSF026166 1 326 4.5E-136 T 15-10-2018 IPR016833 Putative sodium bile acid cotransporter XDD1_1625 2051f72dcc1e777cc1fee9be4c289d68 228 Gene3D G3DSA:2.60.40.10 130 224 1.4E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_1625 2051f72dcc1e777cc1fee9be4c289d68 228 SUPERFAMILY SSF49373 136 225 6.8E-10 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments XDD1_0596 3f76bcbdd51bbda3aae227b962566288 197 Pfam PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) 36 193 6.7E-20 T 15-10-2018 IPR013382 CRISPR-associated protein Cse2 XDD1_0596 3f76bcbdd51bbda3aae227b962566288 197 TIGRFAM TIGR02548 casB_cse2: CRISPR type I-E/ECOLI-associated protein CasB/Cse2 21 194 1.9E-23 T 15-10-2018 IPR013382 CRISPR-associated protein Cse2 XDD1_0596 3f76bcbdd51bbda3aae227b962566288 197 Gene3D G3DSA:1.10.520.40 3 197 1.9E-29 T 15-10-2018 IPR038287 Cse2 superfamily XDD1_1298 9d1c966f4bd860e408808a45ab32e543 268 SUPERFAMILY SSF100950 1 261 1.36E-105 T 15-10-2018 IPR037171 NagB/RpiA transferase-like XDD1_1298 9d1c966f4bd860e408808a45ab32e543 268 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 15-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 XDD1_1298 9d1c966f4bd860e408808a45ab32e543 268 Gene3D G3DSA:3.40.50.1360 1 267 3.2E-116 T 15-10-2018 XDD1_1298 9d1c966f4bd860e408808a45ab32e543 268 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 13 230 1.7E-20 T 15-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 XDD1_1298 9d1c966f4bd860e408808a45ab32e543 268 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 1.4E-137 T 15-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 XDD1_1298 9d1c966f4bd860e408808a45ab32e543 268 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 41.074 T 15-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 XDD1_0622 3a7e261a8b86bf7ab51818b1572edb44 116 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 66 108 6.3E-8 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 XDD1_0497 dda6a482530354318a6e02a8813ddab4 143 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 6 143 34.23 T 15-10-2018 IPR011194 Uncharacterised protein family UPF0306 XDD1_0497 dda6a482530354318a6e02a8813ddab4 143 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 11 93 3.9E-5 T 15-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XDD1_0497 dda6a482530354318a6e02a8813ddab4 143 PIRSF PIRSF009554 3 143 1.8E-60 T 15-10-2018 IPR011194 Uncharacterised protein family UPF0306 XDD1_0497 dda6a482530354318a6e02a8813ddab4 143 Gene3D G3DSA:2.30.110.10 3 141 2.8E-14 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 XDD1_0497 dda6a482530354318a6e02a8813ddab4 143 SUPERFAMILY SSF50475 10 139 1.2E-18 T 15-10-2018 XDD1_2467 d48f0918cd6c6d61c450afa64e0e4949 128 SMART SM00342 24 107 3.4E-28 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_2467 d48f0918cd6c6d61c450afa64e0e4949 128 Pfam PF12833 Helix-turn-helix domain 30 108 6.8E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_2467 d48f0918cd6c6d61c450afa64e0e4949 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 1.6E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 XDD1_2467 d48f0918cd6c6d61c450afa64e0e4949 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 1.6E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 XDD1_2467 d48f0918cd6c6d61c450afa64e0e4949 128 SUPERFAMILY SSF46689 10 59 7.79E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2467 d48f0918cd6c6d61c450afa64e0e4949 128 Gene3D G3DSA:1.10.10.60 2 60 1.8E-20 T 15-10-2018 XDD1_2467 d48f0918cd6c6d61c450afa64e0e4949 128 SUPERFAMILY SSF46689 60 110 1.93E-14 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2467 d48f0918cd6c6d61c450afa64e0e4949 128 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 61 103 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 XDD1_2467 d48f0918cd6c6d61c450afa64e0e4949 128 Gene3D G3DSA:1.10.10.60 61 118 8.1E-17 T 15-10-2018 XDD1_3479 2d199ceb325d4e8a3eac99f68346f6d0 312 Pfam PF04393 Protein of unknown function (DUF535) 28 306 1.2E-100 T 15-10-2018 IPR007488 Protein of unknown function DUF535 XDD1_0231 e3ab7eb98e6e8d7192bf3afe76e0f11b 227 SUPERFAMILY SSF56672 13 121 6.12E-11 T 15-10-2018 XDD1_0231 e3ab7eb98e6e8d7192bf3afe76e0f11b 227 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 12 107 1.9E-9 T 15-10-2018 IPR000477 Reverse transcriptase domain XDD1_0231 e3ab7eb98e6e8d7192bf3afe76e0f11b 227 Pfam PF08388 Group II intron, maturase-specific domain 152 203 1.8E-5 T 15-10-2018 IPR013597 Group II intron, maturase-specific XDD1_0247 e3ab7eb98e6e8d7192bf3afe76e0f11b 227 SUPERFAMILY SSF56672 13 121 6.12E-11 T 15-10-2018 XDD1_0247 e3ab7eb98e6e8d7192bf3afe76e0f11b 227 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 12 107 1.9E-9 T 15-10-2018 IPR000477 Reverse transcriptase domain XDD1_0247 e3ab7eb98e6e8d7192bf3afe76e0f11b 227 Pfam PF08388 Group II intron, maturase-specific domain 152 203 1.8E-5 T 15-10-2018 IPR013597 Group II intron, maturase-specific XDD1_0491 a5441d21486b3c74d437f0155002fbdd 381 Pfam PF12698 ABC-2 family transporter protein 29 365 9.9E-20 T 15-10-2018 XDD1_0491 a5441d21486b3c74d437f0155002fbdd 381 Gene3D G3DSA:3.40.1710.10 47 159 2.3E-7 T 15-10-2018 XDD1_1526 42263c147de038db62d8d9375f1f3750 372 Pfam PF00155 Aminotransferase class I and II 47 356 4.5E-58 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XDD1_1526 42263c147de038db62d8d9375f1f3750 372 SUPERFAMILY SSF53383 18 358 5.66E-80 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_1526 42263c147de038db62d8d9375f1f3750 372 Gene3D G3DSA:3.40.640.10 55 263 1.4E-128 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_1526 42263c147de038db62d8d9375f1f3750 372 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 357 6.3E-118 T 15-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 XDD1_1526 42263c147de038db62d8d9375f1f3750 372 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 216 225 - T 15-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 XDD1_1526 42263c147de038db62d8d9375f1f3750 372 Gene3D G3DSA:3.90.1150.10 10 352 1.4E-128 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_1526 42263c147de038db62d8d9375f1f3750 372 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 10 360 54.587 T 15-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 XDD1_1518 0b0d2508b7247a4076fce53c0e927894 468 SMART SM01350 178 467 3.6E-225 T 15-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 XDD1_1518 0b0d2508b7247a4076fce53c0e927894 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 178 466 9.9E-135 T 15-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 XDD1_1518 0b0d2508b7247a4076fce53c0e927894 468 Gene3D G3DSA:3.40.50.720 1 179 2.9E-56 T 15-10-2018 XDD1_1518 0b0d2508b7247a4076fce53c0e927894 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 252 264 - T 15-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 XDD1_1518 0b0d2508b7247a4076fce53c0e927894 468 Gene3D G3DSA:1.20.5.320 435 468 3.4E-22 T 15-10-2018 XDD1_1518 0b0d2508b7247a4076fce53c0e927894 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 467 1.4E-232 T 15-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 XDD1_1518 0b0d2508b7247a4076fce53c0e927894 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 173 1.2E-51 T 15-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 XDD1_1518 0b0d2508b7247a4076fce53c0e927894 468 PIRSF PIRSF000109 1 468 7.6E-242 T 15-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 XDD1_1518 0b0d2508b7247a4076fce53c0e927894 468 SUPERFAMILY SSF51735 4 175 1.63E-51 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1518 0b0d2508b7247a4076fce53c0e927894 468 Gene3D G3DSA:1.10.1040.10 180 434 3.1E-112 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 XDD1_1518 0b0d2508b7247a4076fce53c0e927894 468 SUPERFAMILY SSF48179 176 467 1.77E-132 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XDD1_1518 0b0d2508b7247a4076fce53c0e927894 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 167 195 1.5E-89 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 XDD1_1518 0b0d2508b7247a4076fce53c0e927894 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 XDD1_1518 0b0d2508b7247a4076fce53c0e927894 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 XDD1_1518 0b0d2508b7247a4076fce53c0e927894 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 XDD1_1518 0b0d2508b7247a4076fce53c0e927894 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.5E-89 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 XDD1_1518 0b0d2508b7247a4076fce53c0e927894 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 248 275 1.5E-89 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 XDD1_0397 c3b559c74970ff82144592471e3b1965 1124 Gene3D G3DSA:2.30.30.60 948 997 5.4E-11 T 15-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily XDD1_0397 c3b559c74970ff82144592471e3b1965 1124 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 492 829 7.8E-113 T 15-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 XDD1_0397 c3b559c74970ff82144592471e3b1965 1124 SUPERFAMILY SSF82689 1000 1094 7.59E-16 T 15-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 XDD1_0397 c3b559c74970ff82144592471e3b1965 1124 SUPERFAMILY SSF50182 933 998 4.9E-16 T 15-10-2018 IPR010920 LSM domain superfamily XDD1_0397 c3b559c74970ff82144592471e3b1965 1124 Gene3D G3DSA:3.30.70.100 1001 1093 4.4E-10 T 15-10-2018 XDD1_0397 c3b559c74970ff82144592471e3b1965 1124 SUPERFAMILY SSF82861 848 931 1.31E-7 T 15-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 XDD1_0397 c3b559c74970ff82144592471e3b1965 1124 Pfam PF12795 Mechanosensitive ion channel porin domain 33 271 1.2E-53 T 15-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain XDD1_0397 c3b559c74970ff82144592471e3b1965 1124 Pfam PF00924 Mechanosensitive ion channel 891 1088 1.2E-50 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 XDD1_0799 d6b1957a1b96162d8c79f0a581639a09 336 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 110 321 3.3E-90 T 15-10-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0016020|GO:0022857|GO:0055085 XDD1_0799 d6b1957a1b96162d8c79f0a581639a09 336 Pfam PF01618 MotA/TolQ/ExbB proton channel family 195 304 1.4E-34 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel XDD1_0040 7cfb1525aeadde10753c9a27a23799c1 274 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 41 269 2.7E-43 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0040 7cfb1525aeadde10753c9a27a23799c1 274 PRINTS PR00123 ATP synthase A subunit signature 107 123 8.3E-15 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0040 7cfb1525aeadde10753c9a27a23799c1 274 PRINTS PR00123 ATP synthase A subunit signature 254 269 8.3E-15 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0040 7cfb1525aeadde10753c9a27a23799c1 274 PRINTS PR00123 ATP synthase A subunit signature 206 228 8.3E-15 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0040 7cfb1525aeadde10753c9a27a23799c1 274 Hamap MF_01393 ATP synthase subunit a [atpB]. 13 274 15.987 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0040 7cfb1525aeadde10753c9a27a23799c1 274 Pfam PF00119 ATP synthase A chain 52 268 7.1E-55 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0040 7cfb1525aeadde10753c9a27a23799c1 274 SUPERFAMILY SSF81336 98 268 1.83E-47 T 15-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0040 7cfb1525aeadde10753c9a27a23799c1 274 Gene3D G3DSA:1.20.120.220 98 274 8.3E-68 T 15-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0040 7cfb1525aeadde10753c9a27a23799c1 274 ProSitePatterns PS00449 ATP synthase a subunit signature. 209 218 - T 15-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_1472 2072d27949e2ccf3207f61ab4fd1ca4e 227 Gene3D G3DSA:3.40.50.300 3 225 5.3E-67 T 15-10-2018 XDD1_1472 2072d27949e2ccf3207f61ab4fd1ca4e 227 PIRSF PIRSF006755 1 226 2.7E-78 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 XDD1_1472 2072d27949e2ccf3207f61ab4fd1ca4e 227 SUPERFAMILY SSF52540 5 209 6.2E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1472 2072d27949e2ccf3207f61ab4fd1ca4e 227 Pfam PF13500 AAA domain 4 207 3.1E-37 T 15-10-2018 XDD1_1472 2072d27949e2ccf3207f61ab4fd1ca4e 227 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 211 28.683 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 XDD1_1472 2072d27949e2ccf3207f61ab4fd1ca4e 227 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 8.3E-58 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 XDD1_2905 10478bab39d6cd0b2725c11628a7c0a9 105 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 14 93 3.0E-8 T 15-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative XDD1_3295 3c0de74c04465fecdaf0999435098962 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 7 148 37.709 T 15-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XDD1_3295 3c0de74c04465fecdaf0999435098962 150 Pfam PF07977 FabA-like domain 16 141 1.3E-39 T 15-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XDD1_3295 3c0de74c04465fecdaf0999435098962 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 7 145 8.6E-61 T 15-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XDD1_3295 3c0de74c04465fecdaf0999435098962 150 SUPERFAMILY SSF54637 6 146 8.67E-51 T 15-10-2018 IPR029069 HotDog domain superfamily XDD1_3295 3c0de74c04465fecdaf0999435098962 150 Gene3D G3DSA:3.10.129.10 4 147 7.4E-67 T 15-10-2018 XDD1_2493 303364c9e2eb01bba7b2886c3fab8f8f 297 Pfam PF01633 Choline/ethanolamine kinase 71 241 3.8E-14 T 15-10-2018 XDD1_2493 303364c9e2eb01bba7b2886c3fab8f8f 297 Hamap MF_01604 Thiamine kinase [thiK]. 9 294 41.286 T 15-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 XDD1_2493 303364c9e2eb01bba7b2886c3fab8f8f 297 Gene3D G3DSA:3.90.1200.10 122 291 8.8E-17 T 15-10-2018 XDD1_2493 303364c9e2eb01bba7b2886c3fab8f8f 297 SUPERFAMILY SSF56112 10 278 2.62E-35 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily XDD1_2682 1c5747e0c5b53e52d3d0305476dd8e4f 450 Gene3D G3DSA:3.30.300.30 353 434 6.6E-15 T 15-10-2018 XDD1_2682 1c5747e0c5b53e52d3d0305476dd8e4f 450 Pfam PF13193 AMP-binding enzyme C-terminal domain 365 434 2.3E-7 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2682 1c5747e0c5b53e52d3d0305476dd8e4f 450 Gene3D G3DSA:3.40.50.12780 2 352 7.5E-48 T 15-10-2018 XDD1_2682 1c5747e0c5b53e52d3d0305476dd8e4f 450 SUPERFAMILY SSF56801 4 446 5.1E-67 T 15-10-2018 XDD1_2682 1c5747e0c5b53e52d3d0305476dd8e4f 450 Pfam PF00501 AMP-binding enzyme 8 356 2.5E-30 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_3119 d040d799d201e76548c64da5cfdad9fe 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_3119 d040d799d201e76548c64da5cfdad9fe 427 SUPERFAMILY SSF53383 2 425 2.53E-135 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_3119 d040d799d201e76548c64da5cfdad9fe 427 Gene3D G3DSA:3.40.640.10 69 317 9.8E-182 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_3119 d040d799d201e76548c64da5cfdad9fe 427 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.963 T 15-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 XDD1_3119 d040d799d201e76548c64da5cfdad9fe 427 Pfam PF00202 Aminotransferase class-III 32 396 1.7E-78 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_3119 d040d799d201e76548c64da5cfdad9fe 427 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 425 3.1E-200 T 15-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 XDD1_3119 d040d799d201e76548c64da5cfdad9fe 427 Gene3D G3DSA:3.90.1150.10 7 417 9.8E-182 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_2991 94463a6559755fbd16d10fb0ee057322 865 SUPERFAMILY SSF53732 380 860 7.85E-151 T 15-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 XDD1_2991 94463a6559755fbd16d10fb0ee057322 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 XDD1_2991 94463a6559755fbd16d10fb0ee057322 865 Gene3D G3DSA:1.25.40.310 1 161 1.6E-72 T 15-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XDD1_2991 94463a6559755fbd16d10fb0ee057322 865 Gene3D G3DSA:3.40.1060.10 385 681 6.9E-154 T 15-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 XDD1_2991 94463a6559755fbd16d10fb0ee057322 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 XDD1_2991 94463a6559755fbd16d10fb0ee057322 865 Gene3D G3DSA:3.30.499.10 683 865 2.7E-75 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 XDD1_2991 94463a6559755fbd16d10fb0ee057322 865 SUPERFAMILY SSF74778 2 160 8.5E-68 T 15-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XDD1_2991 94463a6559755fbd16d10fb0ee057322 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 9.5E-98 T 15-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XDD1_2991 94463a6559755fbd16d10fb0ee057322 865 Gene3D G3DSA:3.30.499.10 402 529 6.9E-154 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 XDD1_2991 94463a6559755fbd16d10fb0ee057322 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 5.5E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XDD1_2991 94463a6559755fbd16d10fb0ee057322 865 SUPERFAMILY SSF52016 162 371 6.67E-72 T 15-10-2018 XDD1_2991 94463a6559755fbd16d10fb0ee057322 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 15-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XDD1_2991 94463a6559755fbd16d10fb0ee057322 865 Gene3D G3DSA:3.20.19.10 162 361 2.9E-81 T 15-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 XDD1_2991 94463a6559755fbd16d10fb0ee057322 865 PIRSF PIRSF036687 1 859 0.0 T 15-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XDD1_2991 94463a6559755fbd16d10fb0ee057322 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.0E-66 T 15-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XDD1_3103 7210a7e8a3653eb3df616fbb40253303 263 Gene3D G3DSA:3.20.20.60 1 262 1.2E-103 T 15-10-2018 XDD1_3103 7210a7e8a3653eb3df616fbb40253303 263 SUPERFAMILY SSF51621 4 262 1.36E-101 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XDD1_3103 7210a7e8a3653eb3df616fbb40253303 263 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 257 4.3E-105 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 XDD1_3103 7210a7e8a3653eb3df616fbb40253303 263 PIRSF PIRSF000388 1 263 4.1E-97 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 XDD1_3103 7210a7e8a3653eb3df616fbb40253303 263 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 262 41.091 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 XDD1_3103 7210a7e8a3653eb3df616fbb40253303 263 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 2.2E-117 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 XDD1_2756 e3886c2366eeb8b3fdd44070af7fef11 557 Pfam PF03354 Phage Terminase 71 532 3.5E-90 T 15-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type XDD1_2756 e3886c2366eeb8b3fdd44070af7fef11 557 Gene3D G3DSA:3.40.50.300 22 248 6.4E-23 T 15-10-2018 XDD1_1566 74d77bff7da6eab69d8089bd766072ba 760 SUPERFAMILY SSF51998 5 758 4.88E-288 T 15-10-2018 XDD1_1566 74d77bff7da6eab69d8089bd766072ba 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 15-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site XDD1_1566 74d77bff7da6eab69d8089bd766072ba 760 PIRSF PIRSF000379 8 760 0.0 T 15-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 XDD1_1566 74d77bff7da6eab69d8089bd766072ba 760 Pfam PF02901 Pyruvate formate lyase-like 23 614 9.3E-205 T 15-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 XDD1_1566 74d77bff7da6eab69d8089bd766072ba 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 759 0.0 T 15-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 XDD1_1566 74d77bff7da6eab69d8089bd766072ba 760 Gene3D G3DSA:3.20.70.20 2 760 0.0 T 15-10-2018 XDD1_1566 74d77bff7da6eab69d8089bd766072ba 760 Pfam PF01228 Glycine radical 630 741 1.1E-43 T 15-10-2018 IPR001150 Glycine radical domain GO:0003824 XDD1_2568 de0c8441af22e050ac9cccc17f647145 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.75 T 15-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 XDD1_2568 de0c8441af22e050ac9cccc17f647145 285 Gene3D G3DSA:3.90.226.10 1 222 8.1E-88 T 15-10-2018 XDD1_2568 de0c8441af22e050ac9cccc17f647145 285 SUPERFAMILY SSF52096 18 280 1.01E-79 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XDD1_2568 de0c8441af22e050ac9cccc17f647145 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 XDD1_2568 de0c8441af22e050ac9cccc17f647145 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 2.4E-146 T 15-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 XDD1_2568 de0c8441af22e050ac9cccc17f647145 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 32 280 2.2E-81 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 XDD1_2568 de0c8441af22e050ac9cccc17f647145 285 Gene3D G3DSA:1.10.12.10 223 273 3.9E-31 T 15-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal XDD1_2759 d6169a63b5f11e27d61e8c7e13863ccf 302 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 58.053 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XDD1_2759 d6169a63b5f11e27d61e8c7e13863ccf 302 PRINTS PR00073 Coprogen oxidase signature 90 114 1.9E-85 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XDD1_2759 d6169a63b5f11e27d61e8c7e13863ccf 302 PRINTS PR00073 Coprogen oxidase signature 234 261 1.9E-85 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XDD1_2759 d6169a63b5f11e27d61e8c7e13863ccf 302 PRINTS PR00073 Coprogen oxidase signature 162 191 1.9E-85 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XDD1_2759 d6169a63b5f11e27d61e8c7e13863ccf 302 PRINTS PR00073 Coprogen oxidase signature 31 47 1.9E-85 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XDD1_2759 d6169a63b5f11e27d61e8c7e13863ccf 302 PRINTS PR00073 Coprogen oxidase signature 48 69 1.9E-85 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XDD1_2759 d6169a63b5f11e27d61e8c7e13863ccf 302 PRINTS PR00073 Coprogen oxidase signature 125 147 1.9E-85 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XDD1_2759 d6169a63b5f11e27d61e8c7e13863ccf 302 PRINTS PR00073 Coprogen oxidase signature 262 288 1.9E-85 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XDD1_2759 d6169a63b5f11e27d61e8c7e13863ccf 302 Pfam PF01218 Coproporphyrinogen III oxidase 8 302 9.7E-133 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XDD1_2759 d6169a63b5f11e27d61e8c7e13863ccf 302 PIRSF PIRSF000166 4 302 6.9E-130 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XDD1_2759 d6169a63b5f11e27d61e8c7e13863ccf 302 SUPERFAMILY SSF102886 7 302 2.35E-140 T 15-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XDD1_2759 d6169a63b5f11e27d61e8c7e13863ccf 302 Gene3D G3DSA:3.40.1500.10 2 302 1.4E-136 T 15-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XDD1_2759 d6169a63b5f11e27d61e8c7e13863ccf 302 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 15-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XDD1_1660 527f7c235240990b584bad300628f978 305 Gene3D G3DSA:3.40.190.10 99 284 4.9E-25 T 15-10-2018 XDD1_1660 527f7c235240990b584bad300628f978 305 Pfam PF03466 LysR substrate binding domain 118 283 1.2E-17 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_1660 527f7c235240990b584bad300628f978 305 SUPERFAMILY SSF46785 3 79 6.26E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1660 527f7c235240990b584bad300628f978 305 Gene3D G3DSA:3.40.190.10 169 276 4.9E-25 T 15-10-2018 XDD1_1660 527f7c235240990b584bad300628f978 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.4E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_1660 527f7c235240990b584bad300628f978 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.4E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_1660 527f7c235240990b584bad300628f978 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.4E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_1660 527f7c235240990b584bad300628f978 305 SUPERFAMILY SSF53850 99 284 3.26E-15 T 15-10-2018 XDD1_1660 527f7c235240990b584bad300628f978 305 Gene3D G3DSA:1.10.10.10 4 90 6.3E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1660 527f7c235240990b584bad300628f978 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 4.2E-21 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2434 69f42c6e56f136d2d235047e5d065537 487 Pfam PF01769 Divalent cation transporter 358 479 1.3E-24 T 15-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 XDD1_2434 69f42c6e56f136d2d235047e5d065537 487 TIGRFAM TIGR00400 mgtE: magnesium transporter 60 486 5.3E-80 T 15-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 XDD1_2434 69f42c6e56f136d2d235047e5d065537 487 SUPERFAMILY SSF54631 174 313 1.09E-25 T 15-10-2018 XDD1_2434 69f42c6e56f136d2d235047e5d065537 487 Pfam PF00571 CBS domain 238 293 1.5E-7 T 15-10-2018 IPR000644 CBS domain XDD1_2434 69f42c6e56f136d2d235047e5d065537 487 SUPERFAMILY SSF161093 316 486 9.02E-48 T 15-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 XDD1_2434 69f42c6e56f136d2d235047e5d065537 487 SMART SM00924 71 174 2.0E-30 T 15-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain XDD1_2434 69f42c6e56f136d2d235047e5d065537 487 SMART SM00116 181 234 57.0 T 15-10-2018 IPR000644 CBS domain XDD1_2434 69f42c6e56f136d2d235047e5d065537 487 SMART SM00116 245 293 5.5E-4 T 15-10-2018 IPR000644 CBS domain XDD1_2434 69f42c6e56f136d2d235047e5d065537 487 Gene3D G3DSA:1.10.357.20 313 487 5.5E-47 T 15-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain XDD1_2434 69f42c6e56f136d2d235047e5d065537 487 SUPERFAMILY SSF158791 60 170 3.53E-23 T 15-10-2018 XDD1_2434 69f42c6e56f136d2d235047e5d065537 487 Pfam PF03448 MgtE intracellular N domain 71 172 4.4E-23 T 15-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain XDD1_2434 69f42c6e56f136d2d235047e5d065537 487 Gene3D G3DSA:1.25.60.10 50 169 3.0E-15 T 15-10-2018 IPR038076 MgtE, N-terminal domain superfamily XDD1_2434 69f42c6e56f136d2d235047e5d065537 487 Gene3D G3DSA:3.10.580.10 170 297 5.6E-36 T 15-10-2018 XDD1_2428 885cc4d2a76ca9e40faa18aa9bef80b5 347 Gene3D G3DSA:3.30.1330.10 6 170 7.3E-69 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XDD1_2428 885cc4d2a76ca9e40faa18aa9bef80b5 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 176 335 1.1E-36 T 15-10-2018 IPR010918 PurM-like, C-terminal domain XDD1_2428 885cc4d2a76ca9e40faa18aa9bef80b5 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 164 3.3E-16 T 15-10-2018 IPR016188 PurM-like, N-terminal domain XDD1_2428 885cc4d2a76ca9e40faa18aa9bef80b5 347 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 346 47.055 T 15-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XDD1_2428 885cc4d2a76ca9e40faa18aa9bef80b5 347 Gene3D G3DSA:3.90.650.10 171 346 1.3E-71 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XDD1_2428 885cc4d2a76ca9e40faa18aa9bef80b5 347 SUPERFAMILY SSF56042 171 337 4.04E-63 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XDD1_2428 885cc4d2a76ca9e40faa18aa9bef80b5 347 SUPERFAMILY SSF55326 7 170 1.94E-53 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XDD1_2428 885cc4d2a76ca9e40faa18aa9bef80b5 347 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 335 3.0E-152 T 15-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XDD1_2577 9a4b4e33e65d5d3f5a173de48de9c949 420 Gene3D G3DSA:3.30.70.270 246 415 8.4E-51 T 15-10-2018 XDD1_2577 9a4b4e33e65d5d3f5a173de48de9c949 420 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 245 403 2.0E-43 T 15-10-2018 IPR000160 GGDEF domain XDD1_2577 9a4b4e33e65d5d3f5a173de48de9c949 420 SMART SM00267 238 408 3.5E-61 T 15-10-2018 IPR000160 GGDEF domain XDD1_2577 9a4b4e33e65d5d3f5a173de48de9c949 420 Pfam PF17152 Periplasmic sensor domain 45 146 2.0E-29 T 15-10-2018 IPR033417 Periplasmic sensor domain CHASE8 XDD1_2577 9a4b4e33e65d5d3f5a173de48de9c949 420 SUPERFAMILY SSF55073 254 405 1.49E-43 T 15-10-2018 IPR029787 Nucleotide cyclase XDD1_2577 9a4b4e33e65d5d3f5a173de48de9c949 420 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 402 2.3E-43 T 15-10-2018 IPR000160 GGDEF domain XDD1_2589 749fd19d23c3982aaf885888c7752b38 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 23.86 T 15-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2589 749fd19d23c3982aaf885888c7752b38 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 15-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2589 749fd19d23c3982aaf885888c7752b38 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 15-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2589 749fd19d23c3982aaf885888c7752b38 325 Pfam PF00146 NADH dehydrogenase 17 316 5.3E-118 T 15-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 SUPERFAMILY SSF55060 205 380 1.76E-48 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 Gene3D G3DSA:3.30.230.10 23 201 6.2E-125 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 Hamap MF_00246 Galactokinase [galK]. 26 381 41.915 T 15-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 15-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 PIRSF PIRSF000530 1 384 1.4E-122 T 15-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 PRINTS PR00473 Galactokinase signature 28 46 7.2E-28 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 PRINTS PR00473 Galactokinase signature 112 130 7.2E-28 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 PRINTS PR00473 Galactokinase signature 92 103 7.2E-28 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 PRINTS PR00473 Galactokinase signature 263 277 7.2E-28 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 15-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 1.1E-134 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 Gene3D G3DSA:3.30.70.890 202 357 6.2E-125 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 PRINTS PR00959 Mevalonate kinase family signature 162 181 5.1E-45 T 15-10-2018 XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 PRINTS PR00959 Mevalonate kinase family signature 26 50 5.1E-45 T 15-10-2018 XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 PRINTS PR00959 Mevalonate kinase family signature 328 345 5.1E-45 T 15-10-2018 XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 PRINTS PR00959 Mevalonate kinase family signature 119 141 5.1E-45 T 15-10-2018 XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 Pfam PF08544 GHMP kinases C terminal 279 360 5.9E-10 T 15-10-2018 IPR013750 GHMP kinase, C-terminal domain XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 SUPERFAMILY SSF54211 2 203 3.19E-64 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 Pfam PF10509 Galactokinase galactose-binding signature 11 59 1.4E-21 T 15-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 XDD1_3147 1b8e4a5b4d25f26f02afd4dfcf896b8f 384 Pfam PF00288 GHMP kinases N terminal domain 114 182 9.7E-14 T 15-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 XDD1_2478 d3ef18a985aecd0a4ed7996e61056efd 456 SUPERFAMILY SSF48557 10 454 1.73E-105 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 XDD1_2478 d3ef18a985aecd0a4ed7996e61056efd 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 2.3E-149 T 15-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XDD1_2478 d3ef18a985aecd0a4ed7996e61056efd 456 Gene3D G3DSA:1.20.200.10 118 446 4.6E-157 T 15-10-2018 XDD1_2478 d3ef18a985aecd0a4ed7996e61056efd 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 2.5E-16 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_2478 d3ef18a985aecd0a4ed7996e61056efd 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 2.5E-16 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_2478 d3ef18a985aecd0a4ed7996e61056efd 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 2.5E-16 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_2478 d3ef18a985aecd0a4ed7996e61056efd 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 2.5E-16 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_2478 d3ef18a985aecd0a4ed7996e61056efd 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 1.0E-53 T 15-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 XDD1_2478 d3ef18a985aecd0a4ed7996e61056efd 456 Gene3D G3DSA:1.10.40.30 382 445 4.6E-157 T 15-10-2018 XDD1_2478 d3ef18a985aecd0a4ed7996e61056efd 456 Gene3D G3DSA:1.10.275.10 1 117 4.1E-52 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal XDD1_2478 d3ef18a985aecd0a4ed7996e61056efd 456 Pfam PF00206 Lyase 14 312 3.4E-75 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal XDD1_2478 d3ef18a985aecd0a4ed7996e61056efd 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 XDD1_0238 0b9b8a99a77050b0e1640d39cfd97a2b 380 Gene3D G3DSA:3.40.50.800 273 374 3.7E-10 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily XDD1_0238 0b9b8a99a77050b0e1640d39cfd97a2b 380 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 103 269 1.5E-7 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_0238 0b9b8a99a77050b0e1640d39cfd97a2b 380 Gene3D G3DSA:3.30.930.10 1 272 4.7E-21 T 15-10-2018 XDD1_0238 0b9b8a99a77050b0e1640d39cfd97a2b 380 SUPERFAMILY SSF52954 275 354 1.28E-9 T 15-10-2018 XDD1_0238 0b9b8a99a77050b0e1640d39cfd97a2b 380 SUPERFAMILY SSF55681 30 291 9.95E-24 T 15-10-2018 XDD1_1751 db01d3c3867c062cae392ffc3b60e545 197 PIRSF PIRSF030780 1 193 6.3E-70 T 15-10-2018 IPR016956 Inner membrane protein YdjM XDD1_1751 db01d3c3867c062cae392ffc3b60e545 197 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 159 1.9E-33 T 15-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase XDD1_3924 f0cdbd1b7834e505eca4a3fccc0121d3 265 Gene3D G3DSA:1.10.12.10 208 265 8.4E-25 T 15-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal XDD1_3924 f0cdbd1b7834e505eca4a3fccc0121d3 265 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 7 265 1.5E-117 T 15-10-2018 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18 XDD1_3924 f0cdbd1b7834e505eca4a3fccc0121d3 265 SUPERFAMILY SSF52096 2 264 6.75E-89 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XDD1_3924 f0cdbd1b7834e505eca4a3fccc0121d3 265 Gene3D G3DSA:3.90.226.10 1 207 1.3E-74 T 15-10-2018 XDD1_3924 f0cdbd1b7834e505eca4a3fccc0121d3 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 264 1.4E-72 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 XDD1_2913 f492071c81ed64f4f409197d160a00b2 202 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 6 142 1.2E-58 T 15-10-2018 IPR006521 Tail protein I XDD1_2913 f492071c81ed64f4f409197d160a00b2 202 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 141 4.0E-52 T 15-10-2018 IPR006521 Tail protein I XDD1_3621 08d3d183eb11571f491ef598d96ae8bd 141 SUPERFAMILY SSF55811 2 126 4.33E-26 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XDD1_3621 08d3d183eb11571f491ef598d96ae8bd 141 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XDD1_3621 08d3d183eb11571f491ef598d96ae8bd 141 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.2E-6 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 XDD1_3621 08d3d183eb11571f491ef598d96ae8bd 141 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.2E-6 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 XDD1_3621 08d3d183eb11571f491ef598d96ae8bd 141 Gene3D G3DSA:3.90.79.10 1 141 1.1E-40 T 15-10-2018 XDD1_3621 08d3d183eb11571f491ef598d96ae8bd 141 Pfam PF00293 NUDIX domain 2 128 2.1E-19 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XDD1_3209 e37c4de8a534d2d9f660608363bf0abe 431 Pfam PF07005 Putative sugar-binding N-terminal domain 5 232 2.6E-65 T 15-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain XDD1_3209 e37c4de8a534d2d9f660608363bf0abe 431 Gene3D G3DSA:3.40.50.10840 5 240 1.0E-81 T 15-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily XDD1_3209 e37c4de8a534d2d9f660608363bf0abe 431 SUPERFAMILY SSF142764 5 422 6.93E-123 T 15-10-2018 XDD1_3209 e37c4de8a534d2d9f660608363bf0abe 431 Gene3D G3DSA:3.40.980.20 248 423 2.4E-53 T 15-10-2018 XDD1_3209 e37c4de8a534d2d9f660608363bf0abe 431 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 259 415 6.1E-35 T 15-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain XDD1_0868 b78a96ce0332e7583cce2f4579ca66e0 295 Gene3D G3DSA:1.10.287.90 2 86 9.4E-31 T 15-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0868 b78a96ce0332e7583cce2f4579ca66e0 295 Pfam PF06481 COX Aromatic Rich Motif 213 259 4.0E-21 T 15-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 XDD1_0868 b78a96ce0332e7583cce2f4579ca66e0 295 SUPERFAMILY SSF81464 1 91 1.8E-21 T 15-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_0868 b78a96ce0332e7583cce2f4579ca66e0 295 SUPERFAMILY SSF49503 93 255 3.98E-52 T 15-10-2018 IPR008972 Cupredoxin XDD1_0868 b78a96ce0332e7583cce2f4579ca66e0 295 PIRSF PIRSF000292 1 287 3.4E-127 T 15-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 XDD1_0868 b78a96ce0332e7583cce2f4579ca66e0 295 Gene3D G3DSA:2.60.40.420 87 256 4.9E-61 T 15-10-2018 IPR008972 Cupredoxin XDD1_0868 b78a96ce0332e7583cce2f4579ca66e0 295 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 2 213 2.8E-111 T 15-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 XDD1_0868 b78a96ce0332e7583cce2f4579ca66e0 295 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 122 193 1.4E-5 T 15-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XDD1_3108 ed62be6ae458b2e573db55e20106047b 235 Gene3D G3DSA:3.40.1350.60 81 233 3.4E-54 T 15-10-2018 XDD1_3108 ed62be6ae458b2e573db55e20106047b 235 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 227 6.7E-83 T 15-10-2018 IPR005224 Sugar fermentation stimulation protein XDD1_3108 ed62be6ae458b2e573db55e20106047b 235 Gene3D G3DSA:2.40.50.580 1 80 6.2E-31 T 15-10-2018 XDD1_3108 ed62be6ae458b2e573db55e20106047b 235 Pfam PF03749 Sugar fermentation stimulation protein 13 224 3.1E-76 T 15-10-2018 IPR005224 Sugar fermentation stimulation protein XDD1_3108 ed62be6ae458b2e573db55e20106047b 235 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 55.28 T 15-10-2018 IPR005224 Sugar fermentation stimulation protein XDD1_1722 53338a5f7f801d67cd3f3e6843c289f4 458 Gene3D G3DSA:1.20.1250.20 28 230 3.5E-34 T 15-10-2018 XDD1_1722 53338a5f7f801d67cd3f3e6843c289f4 458 Gene3D G3DSA:1.20.1250.20 246 457 3.6E-37 T 15-10-2018 XDD1_1722 53338a5f7f801d67cd3f3e6843c289f4 458 PIRSF PIRSF002808 9 458 4.1E-104 T 15-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 XDD1_1722 53338a5f7f801d67cd3f3e6843c289f4 458 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 2.5E-135 T 15-10-2018 XDD1_1722 53338a5f7f801d67cd3f3e6843c289f4 458 SUPERFAMILY SSF103473 17 449 1.09E-56 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1722 53338a5f7f801d67cd3f3e6843c289f4 458 Pfam PF07690 Major Facilitator Superfamily 35 396 4.0E-34 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0819 de5fd1197f3f9a166c9d9aec13cc8286 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 465 2.0E-93 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain XDD1_0819 de5fd1197f3f9a166c9d9aec13cc8286 540 SUPERFAMILY SSF53850 38 535 3.26E-136 T 15-10-2018 XDD1_0819 de5fd1197f3f9a166c9d9aec13cc8286 540 Gene3D G3DSA:3.10.105.10 299 510 1.3E-178 T 15-10-2018 XDD1_0819 de5fd1197f3f9a166c9d9aec13cc8286 540 Gene3D G3DSA:3.40.190.10 45 522 1.3E-178 T 15-10-2018 XDD1_0819 de5fd1197f3f9a166c9d9aec13cc8286 540 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 90 111 - T 15-10-2018 IPR023765 Solute-binding protein family 5, conserved site XDD1_0819 de5fd1197f3f9a166c9d9aec13cc8286 540 PIRSF PIRSF002741 10 540 8.0E-107 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 XDD1_0819 de5fd1197f3f9a166c9d9aec13cc8286 540 Gene3D G3DSA:3.90.76.10 74 197 1.3E-178 T 15-10-2018 XDD1_0752 3f192263007abf29e084665d0dbba4a4 170 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 18.006 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XDD1_0752 3f192263007abf29e084665d0dbba4a4 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 1.9E-19 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XDD1_0752 3f192263007abf29e084665d0dbba4a4 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 1.9E-19 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XDD1_0752 3f192263007abf29e084665d0dbba4a4 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 1.9E-19 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XDD1_0752 3f192263007abf29e084665d0dbba4a4 170 Pfam PF01252 Signal peptidase (SPase) II 16 156 1.5E-39 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XDD1_0752 3f192263007abf29e084665d0dbba4a4 170 TIGRFAM TIGR00077 lspA: signal peptidase II 2 163 2.4E-56 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XDD1_0752 3f192263007abf29e084665d0dbba4a4 170 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XDD1_3390 138e040490942368af1faaeb18197eb3 125 Pfam PF04379 ApaG domain 18 102 1.1E-34 T 15-10-2018 IPR007474 ApaG domain XDD1_3390 138e040490942368af1faaeb18197eb3 125 SUPERFAMILY SSF110069 5 125 4.84E-48 T 15-10-2018 IPR036767 ApaG domain superfamily XDD1_3390 138e040490942368af1faaeb18197eb3 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 31.954 T 15-10-2018 IPR023065 Uncharacterised protein family ApaG XDD1_3390 138e040490942368af1faaeb18197eb3 125 Gene3D G3DSA:2.60.40.1470 2 125 1.3E-46 T 15-10-2018 IPR036767 ApaG domain superfamily XDD1_3943 b383e2de3e8ba2c21fae1abeb1e64c6d 86 SUPERFAMILY SSF47345 1 86 1.24E-35 T 15-10-2018 IPR035900 Colicin E immunity protein superfamily XDD1_3943 b383e2de3e8ba2c21fae1abeb1e64c6d 86 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 4 84 2.6E-36 T 15-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 XDD1_3943 b383e2de3e8ba2c21fae1abeb1e64c6d 86 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 63 84 6.1E-25 T 15-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 XDD1_3943 b383e2de3e8ba2c21fae1abeb1e64c6d 86 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 4 22 6.1E-25 T 15-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 XDD1_3943 b383e2de3e8ba2c21fae1abeb1e64c6d 86 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 40 56 6.1E-25 T 15-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 XDD1_3943 b383e2de3e8ba2c21fae1abeb1e64c6d 86 Gene3D G3DSA:1.10.1200.20 1 86 2.3E-38 T 15-10-2018 IPR035900 Colicin E immunity protein superfamily XDD1_3943 b383e2de3e8ba2c21fae1abeb1e64c6d 86 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 9 86 2.0E-27 T 15-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 XDD1_2947 76e7478c611fcaa099410515eb53e1a3 243 Pfam PF11153 Protein of unknown function (DUF2931) 48 241 1.6E-36 T 15-10-2018 IPR021326 Protein of unknown function DUF2931 XDD1_0450 8b8eb8dd9aaf0332b3e262f5697af4ed 334 SUPERFAMILY SSF56655 2 328 3.95E-112 T 15-10-2018 XDD1_0450 8b8eb8dd9aaf0332b3e262f5697af4ed 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 4.8E-74 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 XDD1_0450 8b8eb8dd9aaf0332b3e262f5697af4ed 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 4.8E-74 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 XDD1_0450 8b8eb8dd9aaf0332b3e262f5697af4ed 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 4.8E-74 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 XDD1_0450 8b8eb8dd9aaf0332b3e262f5697af4ed 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 4.8E-74 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 XDD1_0450 8b8eb8dd9aaf0332b3e262f5697af4ed 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 304 329 4.8E-74 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 XDD1_0450 8b8eb8dd9aaf0332b3e262f5697af4ed 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 4.8E-74 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 XDD1_0450 8b8eb8dd9aaf0332b3e262f5697af4ed 334 PIRSF PIRSF500210 1 332 1.5E-126 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 XDD1_0450 8b8eb8dd9aaf0332b3e262f5697af4ed 334 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 330 42.673 T 15-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 XDD1_0450 8b8eb8dd9aaf0332b3e262f5697af4ed 334 PIRSF PIRSF000904 1 333 2.1E-123 T 15-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 XDD1_0450 8b8eb8dd9aaf0332b3e262f5697af4ed 334 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 194 1.9E-79 T 15-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 XDD1_0450 8b8eb8dd9aaf0332b3e262f5697af4ed 334 Gene3D G3DSA:3.30.540.10 1 195 8.8E-75 T 15-10-2018 XDD1_0450 8b8eb8dd9aaf0332b3e262f5697af4ed 334 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 270 282 - T 15-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 XDD1_0450 8b8eb8dd9aaf0332b3e262f5697af4ed 334 Gene3D G3DSA:3.40.190.80 197 334 1.8E-59 T 15-10-2018 XDD1_3938 50e3c71a2751ebf4c78b01a2db412130 219 SUPERFAMILY SSF46785 14 197 5.81E-25 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3938 50e3c71a2751ebf4c78b01a2db412130 219 Gene3D G3DSA:1.10.10.10 4 100 2.7E-7 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0216 198013675bc71e41462e352be4a8fde5 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 4.1E-33 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 XDD1_0216 198013675bc71e41462e352be4a8fde5 334 SMART SM00859 3 146 7.2E-49 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 XDD1_0216 198013675bc71e41462e352be4a8fde5 334 SUPERFAMILY SSF55347 154 308 1.5E-50 T 15-10-2018 XDD1_0216 198013675bc71e41462e352be4a8fde5 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 7.0E-126 T 15-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XDD1_0216 198013675bc71e41462e352be4a8fde5 334 SUPERFAMILY SSF51735 2 183 2.25E-44 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0216 198013675bc71e41462e352be4a8fde5 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 39.271 T 15-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XDD1_0216 198013675bc71e41462e352be4a8fde5 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 15-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XDD1_0216 198013675bc71e41462e352be4a8fde5 334 Gene3D G3DSA:3.40.50.720 6 330 1.6E-126 T 15-10-2018 XDD1_0216 198013675bc71e41462e352be4a8fde5 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 1.9E-17 T 15-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XDD1_0216 198013675bc71e41462e352be4a8fde5 334 Gene3D G3DSA:3.30.360.10 153 312 1.6E-126 T 15-10-2018 XDD1_0373 3e2525dfac0367a23d3a17bdb663a6a5 316 SUPERFAMILY SSF143865 1 255 4.32E-33 T 15-10-2018 XDD1_0373 3e2525dfac0367a23d3a17bdb663a6a5 316 Pfam PF01544 CorA-like Mg2+ transporter protein 27 312 4.7E-49 T 15-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 XDD1_0373 3e2525dfac0367a23d3a17bdb663a6a5 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 316 1.9E-102 T 15-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 XDD1_0373 3e2525dfac0367a23d3a17bdb663a6a5 316 SUPERFAMILY SSF144083 251 314 2.48E-20 T 15-10-2018 XDD1_0373 3e2525dfac0367a23d3a17bdb663a6a5 316 Gene3D G3DSA:1.20.58.340 240 316 2.8E-25 T 15-10-2018 XDD1_1889 10ad77fad3f53b733fcf65440ad0b3f2 168 SUPERFAMILY SSF141452 14 166 4.97E-23 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_1889 10ad77fad3f53b733fcf65440ad0b3f2 168 Gene3D G3DSA:2.30.110.20 13 167 9.9E-29 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_1889 10ad77fad3f53b733fcf65440ad0b3f2 168 Pfam PF05638 Type VI secretion system effector, Hcp 14 143 5.1E-22 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_2767 a778cdfa027be5d92108504453db988a 390 SMART SM00564 61 93 4.8E-4 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XDD1_2767 a778cdfa027be5d92108504453db988a 390 SMART SM00564 288 318 730.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XDD1_2767 a778cdfa027be5d92108504453db988a 390 SMART SM00564 153 184 0.0031 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XDD1_2767 a778cdfa027be5d92108504453db988a 390 SMART SM00564 249 280 0.0075 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XDD1_2767 a778cdfa027be5d92108504453db988a 390 SMART SM00564 327 359 3.1 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XDD1_2767 a778cdfa027be5d92108504453db988a 390 SMART SM00564 113 144 0.0018 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XDD1_2767 a778cdfa027be5d92108504453db988a 390 SMART SM00564 198 229 33.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XDD1_2767 a778cdfa027be5d92108504453db988a 390 SUPERFAMILY SSF50998 19 381 8.05E-79 T 15-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily XDD1_2767 a778cdfa027be5d92108504453db988a 390 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 6 388 2.3E-132 T 15-10-2018 IPR017687 Outer membrane protein assembly factor BamB XDD1_2767 a778cdfa027be5d92108504453db988a 390 Gene3D G3DSA:2.130.10.10 17 389 3.3E-98 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 XDD1_2767 a778cdfa027be5d92108504453db988a 390 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 390 39.583 T 15-10-2018 IPR017687 Outer membrane protein assembly factor BamB XDD1_2767 a778cdfa027be5d92108504453db988a 390 Pfam PF13360 PQQ-like domain 75 317 1.1E-53 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat XDD1_0079 d2f74874e4f08c112f8ae29219b2f5a0 143 Gene3D G3DSA:3.10.290.10 3 109 8.0E-38 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XDD1_0079 d2f74874e4f08c112f8ae29219b2f5a0 143 SMART SM00363 10 73 5.8E-10 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0079 d2f74874e4f08c112f8ae29219b2f5a0 143 Pfam PF01479 S4 domain 10 53 3.2E-13 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0079 d2f74874e4f08c112f8ae29219b2f5a0 143 SUPERFAMILY SSF55174 10 104 2.36E-29 T 15-10-2018 XDD1_0079 d2f74874e4f08c112f8ae29219b2f5a0 143 PIRSF PIRSF016821 7 134 1.6E-40 T 15-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 XDD1_0407 2a5a571b3e442f858a3eb64a0b3e85c6 1122 SUPERFAMILY SSF52518 413 537 2.09E-7 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_0407 2a5a571b3e442f858a3eb64a0b3e85c6 1122 Gene3D G3DSA:3.40.920.10 698 902 3.2E-13 T 15-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 XDD1_0407 2a5a571b3e442f858a3eb64a0b3e85c6 1122 Gene3D G3DSA:3.40.50.970 2 204 6.0E-21 T 15-10-2018 XDD1_0407 2a5a571b3e442f858a3eb64a0b3e85c6 1122 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 709 878 1.2E-13 T 15-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 XDD1_0407 2a5a571b3e442f858a3eb64a0b3e85c6 1122 SUPERFAMILY SSF53323 701 905 6.41E-15 T 15-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 XDD1_0407 2a5a571b3e442f858a3eb64a0b3e85c6 1122 SUPERFAMILY SSF52518 9 184 1.09E-15 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_1022 3fc5ad5c991eeee3cec69a925e0591f2 137 SUPERFAMILY SSF55331 10 134 3.02E-43 T 15-10-2018 IPR014347 Tautomerase/MIF superfamily XDD1_1022 3fc5ad5c991eeee3cec69a925e0591f2 137 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 10 131 2.6E-22 T 15-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 XDD1_1022 3fc5ad5c991eeee3cec69a925e0591f2 137 Gene3D G3DSA:3.30.429.10 10 134 7.7E-50 T 15-10-2018 IPR014347 Tautomerase/MIF superfamily XDD1_3223 c50f6a335b90bbc5c18a2cb34a052fa8 322 Hamap MF_00524 Glucokinase [glk]. 4 316 35.905 T 15-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 XDD1_3223 c50f6a335b90bbc5c18a2cb34a052fa8 322 SUPERFAMILY SSF53067 4 318 1.62E-65 T 15-10-2018 XDD1_3223 c50f6a335b90bbc5c18a2cb34a052fa8 322 TIGRFAM TIGR00749 glk: glucokinase 6 310 7.5E-127 T 15-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 XDD1_3223 c50f6a335b90bbc5c18a2cb34a052fa8 322 Gene3D G3DSA:3.40.367.20 100 299 5.5E-116 T 15-10-2018 XDD1_3223 c50f6a335b90bbc5c18a2cb34a052fa8 322 Gene3D G3DSA:3.30.420.40 6 308 5.5E-116 T 15-10-2018 XDD1_3223 c50f6a335b90bbc5c18a2cb34a052fa8 322 Pfam PF02685 Glucokinase 6 315 2.9E-122 T 15-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 XDD1_2091 fa1c6f700f1cb00c2c6a6001bf757a9b 218 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 209 1.9E-52 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 XDD1_2091 fa1c6f700f1cb00c2c6a6001bf757a9b 218 SUPERFAMILY SSF56529 12 210 1.44E-66 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 XDD1_2091 fa1c6f700f1cb00c2c6a6001bf757a9b 218 Gene3D G3DSA:3.90.850.10 1 218 2.0E-75 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 XDD1_3162 8303333e86fcdc9bd81aa9a4cbc0eaba 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 8 167 4.7E-42 T 15-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_3162 8303333e86fcdc9bd81aa9a4cbc0eaba 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 188 336 5.5E-18 T 15-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_3162 8303333e86fcdc9bd81aa9a4cbc0eaba 349 Gene3D G3DSA:3.30.2350.20 16 336 2.4E-121 T 15-10-2018 XDD1_3162 8303333e86fcdc9bd81aa9a4cbc0eaba 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 4 341 28.251 T 15-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_3162 8303333e86fcdc9bd81aa9a4cbc0eaba 349 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 12 341 6.1E-77 T 15-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_3162 8303333e86fcdc9bd81aa9a4cbc0eaba 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 76 89 - T 15-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 XDD1_3162 8303333e86fcdc9bd81aa9a4cbc0eaba 349 Gene3D G3DSA:3.30.2340.10 166 300 2.4E-121 T 15-10-2018 XDD1_3162 8303333e86fcdc9bd81aa9a4cbc0eaba 349 SUPERFAMILY SSF55120 4 339 2.3E-105 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_1434 99db230388d8d4cedf90b783c5b189df 550 Gene3D G3DSA:3.40.50.300 301 547 1.3E-55 T 15-10-2018 XDD1_1434 99db230388d8d4cedf90b783c5b189df 550 Gene3D G3DSA:3.40.50.300 17 299 1.7E-57 T 15-10-2018 XDD1_1434 99db230388d8d4cedf90b783c5b189df 550 SMART SM00382 45 247 2.1E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1434 99db230388d8d4cedf90b783c5b189df 550 SMART SM00382 363 540 5.0E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1434 99db230388d8d4cedf90b783c5b189df 550 Pfam PF00005 ABC transporter 355 486 7.7E-22 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1434 99db230388d8d4cedf90b783c5b189df 550 SUPERFAMILY SSF52540 14 258 1.57E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1434 99db230388d8d4cedf90b783c5b189df 550 Pfam PF00005 ABC transporter 37 203 2.1E-20 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1434 99db230388d8d4cedf90b783c5b189df 550 SUPERFAMILY SSF52540 316 540 3.71E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1434 99db230388d8d4cedf90b783c5b189df 550 Pfam PF12848 ABC transporter 243 328 3.7E-20 T 15-10-2018 IPR032781 ABC-transporter extension domain XDD1_1447 e7fa7e66fa774ad0c32ad1a0ea57e4de 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 39.799 T 15-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 XDD1_1447 e7fa7e66fa774ad0c32ad1a0ea57e4de 213 Gene3D G3DSA:3.40.50.300 5 212 6.1E-64 T 15-10-2018 XDD1_1447 e7fa7e66fa774ad0c32ad1a0ea57e4de 213 PRINTS PR00988 Uridine kinase signature 87 102 3.2E-38 T 15-10-2018 XDD1_1447 e7fa7e66fa774ad0c32ad1a0ea57e4de 213 PRINTS PR00988 Uridine kinase signature 143 153 3.2E-38 T 15-10-2018 XDD1_1447 e7fa7e66fa774ad0c32ad1a0ea57e4de 213 PRINTS PR00988 Uridine kinase signature 157 168 3.2E-38 T 15-10-2018 XDD1_1447 e7fa7e66fa774ad0c32ad1a0ea57e4de 213 PRINTS PR00988 Uridine kinase signature 179 192 3.2E-38 T 15-10-2018 XDD1_1447 e7fa7e66fa774ad0c32ad1a0ea57e4de 213 PRINTS PR00988 Uridine kinase signature 42 53 3.2E-38 T 15-10-2018 XDD1_1447 e7fa7e66fa774ad0c32ad1a0ea57e4de 213 PRINTS PR00988 Uridine kinase signature 8 25 3.2E-38 T 15-10-2018 XDD1_1447 e7fa7e66fa774ad0c32ad1a0ea57e4de 213 TIGRFAM TIGR00235 udk: uridine kinase 6 211 1.0E-92 T 15-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 XDD1_1447 e7fa7e66fa774ad0c32ad1a0ea57e4de 213 SUPERFAMILY SSF52540 7 205 3.54E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1447 e7fa7e66fa774ad0c32ad1a0ea57e4de 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 2.6E-45 T 15-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 XDD1_2058 11412c252781f4d118f403358ac1baa1 265 PIRSF PIRSF006325 7 263 1.4E-120 T 15-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 XDD1_2058 11412c252781f4d118f403358ac1baa1 265 Gene3D G3DSA:3.40.50.150 24 264 1.1E-64 T 15-10-2018 XDD1_2058 11412c252781f4d118f403358ac1baa1 265 SUPERFAMILY SSF53335 25 262 1.29E-38 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_2058 11412c252781f4d118f403358ac1baa1 265 Pfam PF13649 Methyltransferase domain 66 178 8.6E-11 T 15-10-2018 XDD1_2058 11412c252781f4d118f403358ac1baa1 265 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 10 262 1.7E-118 T 15-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 XDD1_2058 11412c252781f4d118f403358ac1baa1 265 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 9 262 42.229 T 15-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 XDD1_0003 dbd93d0bcc9ea6252e85a59009da8891 363 Gene3D G3DSA:3.40.50.300 8 333 3.5E-82 T 15-10-2018 XDD1_0003 dbd93d0bcc9ea6252e85a59009da8891 363 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 363 98.899 T 15-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 XDD1_0003 dbd93d0bcc9ea6252e85a59009da8891 363 Gene3D G3DSA:1.20.1050.90 122 299 3.5E-82 T 15-10-2018 XDD1_0003 dbd93d0bcc9ea6252e85a59009da8891 363 ProSitePatterns PS00617 RecF protein signature 1. 119 139 - T 15-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 XDD1_0003 dbd93d0bcc9ea6252e85a59009da8891 363 SUPERFAMILY SSF52540 1 333 1.51E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0003 dbd93d0bcc9ea6252e85a59009da8891 363 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 356 1.4E-39 T 15-10-2018 IPR003395 RecF/RecN/SMC, N-terminal XDD1_0003 dbd93d0bcc9ea6252e85a59009da8891 363 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 357 7.0E-136 T 15-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 XDD1_0003 dbd93d0bcc9ea6252e85a59009da8891 363 ProSitePatterns PS00618 RecF protein signature 2. 300 318 - T 15-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 XDD1_2631 5754ae343bf5cbe35ee29467ed1db4d2 311 Gene3D G3DSA:1.10.8.10 16 102 4.9E-5 T 15-10-2018 XDD1_2631 5754ae343bf5cbe35ee29467ed1db4d2 311 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 301 49.22 T 15-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 XDD1_2631 5754ae343bf5cbe35ee29467ed1db4d2 311 SUPERFAMILY SSF53335 15 288 9.77E-50 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_2631 5754ae343bf5cbe35ee29467ed1db4d2 311 PIRSF PIRSF037167 2 308 5.9E-136 T 15-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 XDD1_2631 5754ae343bf5cbe35ee29467ed1db4d2 311 Pfam PF05175 Methyltransferase small domain 133 215 1.2E-16 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 XDD1_2631 5754ae343bf5cbe35ee29467ed1db4d2 311 Gene3D G3DSA:3.40.50.150 103 286 1.2E-45 T 15-10-2018 XDD1_2631 5754ae343bf5cbe35ee29467ed1db4d2 311 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 296 4.4E-125 T 15-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 XDD1_2631 5754ae343bf5cbe35ee29467ed1db4d2 311 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 304 2.0E-95 T 15-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 XDD1_2631 5754ae343bf5cbe35ee29467ed1db4d2 311 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XDD1_0621 1b75e24e500bf57778caf6a3ede5cbed 248 SUPERFAMILY SSF51735 3 247 6.57E-76 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0621 1b75e24e500bf57778caf6a3ede5cbed 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.7E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0621 1b75e24e500bf57778caf6a3ede5cbed 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.7E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0621 1b75e24e500bf57778caf6a3ede5cbed 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.7E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0621 1b75e24e500bf57778caf6a3ede5cbed 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.7E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0621 1b75e24e500bf57778caf6a3ede5cbed 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.7E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0621 1b75e24e500bf57778caf6a3ede5cbed 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.7E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0621 1b75e24e500bf57778caf6a3ede5cbed 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 193 6.1E-4 T 15-10-2018 XDD1_0621 1b75e24e500bf57778caf6a3ede5cbed 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XDD1_0621 1b75e24e500bf57778caf6a3ede5cbed 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.1E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0621 1b75e24e500bf57778caf6a3ede5cbed 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.1E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0621 1b75e24e500bf57778caf6a3ede5cbed 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 2.1E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0621 1b75e24e500bf57778caf6a3ede5cbed 248 Gene3D G3DSA:3.40.50.720 1 247 5.4E-82 T 15-10-2018 XDD1_0621 1b75e24e500bf57778caf6a3ede5cbed 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 247 4.1E-59 T 15-10-2018 XDD1_3074 cea27d134172f9da629037c2585d2b80 94 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 26 75 8.0E-13 T 15-10-2018 IPR010260 DNA-binding transcriptional activator AlpA XDD1_1328 fa4edb6dd8261ad9c2482d3ec86d7857 694 SUPERFAMILY SSF81665 44 673 1.83E-12 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 XDD1_1328 fa4edb6dd8261ad9c2482d3ec86d7857 694 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 319 325 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 XDD1_1328 fa4edb6dd8261ad9c2482d3ec86d7857 694 Pfam PF00702 haloacid dehalogenase-like hydrolase 313 542 6.1E-34 T 15-10-2018 XDD1_1328 fa4edb6dd8261ad9c2482d3ec86d7857 694 Gene3D G3DSA:2.70.150.20 112 218 8.1E-27 T 15-10-2018 XDD1_1328 fa4edb6dd8261ad9c2482d3ec86d7857 694 Pfam PF00122 E1-E2 ATPase 120 294 3.0E-34 T 15-10-2018 XDD1_1328 fa4edb6dd8261ad9c2482d3ec86d7857 694 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 692 40.392 T 15-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 XDD1_1328 fa4edb6dd8261ad9c2482d3ec86d7857 694 Gene3D G3DSA:3.40.50.1000 504 572 1.6E-24 T 15-10-2018 IPR023214 HAD superfamily XDD1_1328 fa4edb6dd8261ad9c2482d3ec86d7857 694 Gene3D G3DSA:3.40.1110.10 328 463 7.6E-53 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 XDD1_1328 fa4edb6dd8261ad9c2482d3ec86d7857 694 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 384 615 1.6E-47 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 XDD1_1328 fa4edb6dd8261ad9c2482d3ec86d7857 694 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 78 352 4.5E-35 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 XDD1_1328 fa4edb6dd8261ad9c2482d3ec86d7857 694 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 3 689 0.0 T 15-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 XDD1_1328 fa4edb6dd8261ad9c2482d3ec86d7857 694 Gene3D G3DSA:1.20.1110.10 573 620 1.6E-24 T 15-10-2018 XDD1_1328 fa4edb6dd8261ad9c2482d3ec86d7857 694 SUPERFAMILY SSF56784 305 571 1.21E-37 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_1328 fa4edb6dd8261ad9c2482d3ec86d7857 694 SUPERFAMILY SSF81653 120 213 1.83E-21 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 XDD1_1328 fa4edb6dd8261ad9c2482d3ec86d7857 694 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 475 485 4.0E-24 T 15-10-2018 XDD1_1328 fa4edb6dd8261ad9c2482d3ec86d7857 694 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 551 563 4.0E-24 T 15-10-2018 XDD1_1328 fa4edb6dd8261ad9c2482d3ec86d7857 694 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 160 174 4.0E-24 T 15-10-2018 XDD1_1328 fa4edb6dd8261ad9c2482d3ec86d7857 694 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 317 331 4.0E-24 T 15-10-2018 XDD1_1328 fa4edb6dd8261ad9c2482d3ec86d7857 694 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 528 547 4.0E-24 T 15-10-2018 XDD1_2529 06669433ecbca09a9bc7e378032b7801 190 Gene3D G3DSA:2.40.50.140 66 130 1.2E-13 T 15-10-2018 XDD1_2529 06669433ecbca09a9bc7e378032b7801 190 PIRSF PIRSF005901 1 190 4.4E-58 T 15-10-2018 IPR020599 Translation elongation factor P/YeiP XDD1_2529 06669433ecbca09a9bc7e378032b7801 190 Gene3D G3DSA:2.30.30.30 1 65 8.0E-16 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 XDD1_2529 06669433ecbca09a9bc7e378032b7801 190 SUPERFAMILY SSF50104 1 64 1.44E-10 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily XDD1_2529 06669433ecbca09a9bc7e378032b7801 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 42.415 T 15-10-2018 IPR011897 Translation elongation factor P-like, YeiP XDD1_2529 06669433ecbca09a9bc7e378032b7801 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 124 3.4E-12 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 XDD1_2529 06669433ecbca09a9bc7e378032b7801 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 2.9E-95 T 15-10-2018 IPR011897 Translation elongation factor P-like, YeiP XDD1_2529 06669433ecbca09a9bc7e378032b7801 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 61 1.6E-15 T 15-10-2018 IPR013185 Translation elongation factor, KOW-like XDD1_2529 06669433ecbca09a9bc7e378032b7801 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 3.7E-17 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 XDD1_2529 06669433ecbca09a9bc7e378032b7801 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 15-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site XDD1_2529 06669433ecbca09a9bc7e378032b7801 190 SUPERFAMILY SSF50249 132 189 2.74E-13 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_2529 06669433ecbca09a9bc7e378032b7801 190 Gene3D G3DSA:2.40.50.140 132 189 3.2E-18 T 15-10-2018 XDD1_2529 06669433ecbca09a9bc7e378032b7801 190 SMART SM00841 133 188 5.0E-24 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 XDD1_2529 06669433ecbca09a9bc7e378032b7801 190 SUPERFAMILY SSF50249 67 130 4.71E-10 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_2529 06669433ecbca09a9bc7e378032b7801 190 SMART SM01185 69 125 1.4E-12 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 XDD1_1543 54996ade836067aead71b61b492e9b37 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_1543 54996ade836067aead71b61b492e9b37 242 SUPERFAMILY SSF52540 3 235 9.23E-68 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1543 54996ade836067aead71b61b492e9b37 242 Pfam PF00005 ABC transporter 20 170 1.6E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1543 54996ade836067aead71b61b492e9b37 242 SMART SM00382 27 218 8.3E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1543 54996ade836067aead71b61b492e9b37 242 PIRSF PIRSF039085 1 242 2.3E-85 T 15-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 XDD1_1543 54996ade836067aead71b61b492e9b37 242 Gene3D G3DSA:3.40.50.300 1 241 1.5E-67 T 15-10-2018 XDD1_0353 11b956d5f78b1dfd8caee7e449339e56 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 375 5.6E-209 T 15-10-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 XDD1_0353 11b956d5f78b1dfd8caee7e449339e56 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 81.048 T 15-10-2018 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315 XDD1_0353 11b956d5f78b1dfd8caee7e449339e56 376 SUPERFAMILY SSF53383 2 375 1.53E-101 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_0353 11b956d5f78b1dfd8caee7e449339e56 376 Gene3D G3DSA:3.90.1150.10 250 376 1.0E-27 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_0353 11b956d5f78b1dfd8caee7e449339e56 376 PIRSF PIRSF000390 1 376 3.2E-111 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase XDD1_0353 11b956d5f78b1dfd8caee7e449339e56 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 371 2.6E-83 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase XDD1_0353 11b956d5f78b1dfd8caee7e449339e56 376 Gene3D G3DSA:3.40.640.10 1 249 2.4E-82 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_3399 b717335ee2d0904511bba664c55550a2 280 Pfam PF00149 Calcineurin-like phosphoesterase 16 206 4.4E-21 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 XDD1_3399 b717335ee2d0904511bba664c55550a2 280 Gene3D G3DSA:3.60.21.10 4 270 7.3E-74 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like XDD1_3399 b717335ee2d0904511bba664c55550a2 280 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 266 4.0E-20 T 15-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 XDD1_3399 b717335ee2d0904511bba664c55550a2 280 SUPERFAMILY SSF56300 16 278 4.5E-59 T 15-10-2018 XDD1_3399 b717335ee2d0904511bba664c55550a2 280 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 266 39.298 T 15-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 XDD1_0711 8cb34ff8485a28c51bd431138fc13cd9 296 Gene3D G3DSA:3.40.190.10 168 267 6.9E-10 T 15-10-2018 XDD1_0711 8cb34ff8485a28c51bd431138fc13cd9 296 Gene3D G3DSA:1.10.10.10 2 87 5.4E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0711 8cb34ff8485a28c51bd431138fc13cd9 296 Gene3D G3DSA:3.40.190.10 95 286 6.9E-10 T 15-10-2018 XDD1_0711 8cb34ff8485a28c51bd431138fc13cd9 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.5E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0711 8cb34ff8485a28c51bd431138fc13cd9 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.5E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0711 8cb34ff8485a28c51bd431138fc13cd9 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.5E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0711 8cb34ff8485a28c51bd431138fc13cd9 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 66 3.9E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0711 8cb34ff8485a28c51bd431138fc13cd9 296 SUPERFAMILY SSF46785 2 84 4.24E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_0711 8cb34ff8485a28c51bd431138fc13cd9 296 SUPERFAMILY SSF53850 92 294 9.31E-17 T 15-10-2018 XDD1_0711 8cb34ff8485a28c51bd431138fc13cd9 296 Pfam PF03466 LysR substrate binding domain 92 293 2.5E-14 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_1732 54adf70b60957c186e22243ce54f0f7f 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 4.1E-95 T 15-10-2018 IPR005130 Serine dehydratase-like, alpha subunit XDD1_1732 54adf70b60957c186e22243ce54f0f7f 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.8E-222 T 15-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 XDD1_1732 54adf70b60957c186e22243ce54f0f7f 454 Gene3D G3DSA:3.30.1330.90 10 159 2.2E-50 T 15-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 XDD1_1732 54adf70b60957c186e22243ce54f0f7f 454 SUPERFAMILY SSF143548 16 158 8.63E-45 T 15-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 XDD1_1732 54adf70b60957c186e22243ce54f0f7f 454 Pfam PF03315 Serine dehydratase beta chain 3 155 2.5E-55 T 15-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 XDD1_1966 2dbac9af12afaedd779ab1ea1ff2cf1a 622 Pfam PF04183 IucA / IucC family 164 407 4.4E-70 T 15-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 XDD1_1966 2dbac9af12afaedd779ab1ea1ff2cf1a 622 Gene3D G3DSA:1.10.510.40 398 620 1.7E-61 T 15-10-2018 XDD1_1966 2dbac9af12afaedd779ab1ea1ff2cf1a 622 Pfam PF06276 Ferric iron reductase FhuF-like transporter 434 605 3.7E-34 T 15-10-2018 IPR022770 Ferric iron reductase FhuF domain XDD1_2901 8d03553dc26561383a35a02c4325271a 504 SUPERFAMILY SSF69279 27 199 7.94E-24 T 15-10-2018 XDD1_2901 8d03553dc26561383a35a02c4325271a 504 Pfam PF05954 Phage late control gene D protein (GPD) 408 489 1.2E-8 T 15-10-2018 XDD1_2901 8d03553dc26561383a35a02c4325271a 504 Pfam PF05954 Phage late control gene D protein (GPD) 60 259 4.8E-19 T 15-10-2018 XDD1_3262 33262bd45aa06c57326b0ca6e64ab282 548 Gene3D G3DSA:3.40.50.10490 12 506 5.3E-241 T 15-10-2018 XDD1_3262 33262bd45aa06c57326b0ca6e64ab282 548 Pfam PF00342 Phosphoglucose isomerase 52 541 1.7E-257 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_3262 33262bd45aa06c57326b0ca6e64ab282 548 Gene3D G3DSA:3.40.50.10490 98 291 5.3E-241 T 15-10-2018 XDD1_3262 33262bd45aa06c57326b0ca6e64ab282 548 Gene3D G3DSA:1.10.1390.10 507 547 1.5E-20 T 15-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_3262 33262bd45aa06c57326b0ca6e64ab282 548 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 15-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_3262 33262bd45aa06c57326b0ca6e64ab282 548 SUPERFAMILY SSF53697 5 547 7.79E-225 T 15-10-2018 XDD1_3262 33262bd45aa06c57326b0ca6e64ab282 548 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 15-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_3262 33262bd45aa06c57326b0ca6e64ab282 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 4.8E-56 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_3262 33262bd45aa06c57326b0ca6e64ab282 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 4.8E-56 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_3262 33262bd45aa06c57326b0ca6e64ab282 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 4.8E-56 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_3262 33262bd45aa06c57326b0ca6e64ab282 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 4.8E-56 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_3262 33262bd45aa06c57326b0ca6e64ab282 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 4.8E-56 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_3262 33262bd45aa06c57326b0ca6e64ab282 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 4.8E-56 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_3262 33262bd45aa06c57326b0ca6e64ab282 548 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.507 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_3535 eb48ecd826f75d35b5a40f8852f75fa1 136 PIRSF PIRSF006092 11 128 5.3E-26 T 15-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 XDD1_3535 eb48ecd826f75d35b5a40f8852f75fa1 136 SUPERFAMILY SSF54534 49 127 9.94E-19 T 15-10-2018 XDD1_3535 eb48ecd826f75d35b5a40f8852f75fa1 136 Gene3D G3DSA:3.10.50.30 45 136 2.3E-30 T 15-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 XDD1_3535 eb48ecd826f75d35b5a40f8852f75fa1 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 126 1.4E-19 T 15-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 XDD1_3535 eb48ecd826f75d35b5a40f8852f75fa1 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 42.542 T 15-10-2018 IPR028625 Regulator of nucleoside diphosphate kinase GO:0070063 XDD1_3535 eb48ecd826f75d35b5a40f8852f75fa1 136 Gene3D G3DSA:1.10.286.20 1 44 7.8E-25 T 15-10-2018 XDD1_3535 eb48ecd826f75d35b5a40f8852f75fa1 136 Pfam PF14760 Rnk N-terminus 4 44 4.0E-14 T 15-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain XDD1_3878 dfb0fb186e399be7e8b4c3ef0494857f 772 ProSitePatterns PS00455 Putative AMP-binding domain signature. 50 61 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_3878 dfb0fb186e399be7e8b4c3ef0494857f 772 Pfam PF00975 Thioesterase domain 516 763 2.3E-16 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 XDD1_3878 dfb0fb186e399be7e8b4c3ef0494857f 772 Gene3D G3DSA:3.30.300.30 306 418 9.9E-22 T 15-10-2018 XDD1_3878 dfb0fb186e399be7e8b4c3ef0494857f 772 Gene3D G3DSA:3.40.50.12780 6 305 1.1E-74 T 15-10-2018 XDD1_3878 dfb0fb186e399be7e8b4c3ef0494857f 772 Pfam PF00501 AMP-binding enzyme 36 311 5.0E-64 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_3878 dfb0fb186e399be7e8b4c3ef0494857f 772 Gene3D G3DSA:1.10.1200.10 419 501 2.4E-16 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_3878 dfb0fb186e399be7e8b4c3ef0494857f 772 SUPERFAMILY SSF47336 422 493 2.49E-16 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_3878 dfb0fb186e399be7e8b4c3ef0494857f 772 SUPERFAMILY SSF53474 495 762 6.49E-33 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_3878 dfb0fb186e399be7e8b4c3ef0494857f 772 SUPERFAMILY SSF56801 29 440 3.27E-88 T 15-10-2018 XDD1_3878 dfb0fb186e399be7e8b4c3ef0494857f 772 Gene3D G3DSA:3.40.50.1820 505 770 4.8E-31 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_3878 dfb0fb186e399be7e8b4c3ef0494857f 772 Pfam PF00550 Phosphopantetheine attachment site 431 491 7.4E-13 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_3267 c3b5d7b81f3752136454fcc7c5525e57 276 Pfam PF01614 Bacterial transcriptional regulator 147 270 6.0E-40 T 15-10-2018 IPR014757 Transcription regulator IclR, C-terminal XDD1_3267 c3b5d7b81f3752136454fcc7c5525e57 276 SMART SM00346 26 116 1.0E-26 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 XDD1_3267 c3b5d7b81f3752136454fcc7c5525e57 276 Pfam PF09339 IclR helix-turn-helix domain 28 78 1.4E-16 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 XDD1_3267 c3b5d7b81f3752136454fcc7c5525e57 276 Gene3D G3DSA:1.10.10.10 11 81 1.3E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3267 c3b5d7b81f3752136454fcc7c5525e57 276 SUPERFAMILY SSF46785 26 99 4.96E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3267 c3b5d7b81f3752136454fcc7c5525e57 276 Gene3D G3DSA:3.30.450.40 98 276 2.5E-62 T 15-10-2018 IPR029016 GAF-like domain superfamily XDD1_3267 c3b5d7b81f3752136454fcc7c5525e57 276 SUPERFAMILY SSF55781 97 273 5.82E-48 T 15-10-2018 XDD1_0689 2d480d45ef801cea551f3fdea6277f60 217 Gene3D G3DSA:1.20.144.10 113 215 3.3E-10 T 15-10-2018 XDD1_0689 2d480d45ef801cea551f3fdea6277f60 217 Pfam PF14378 PAP2 superfamily 60 193 1.7E-11 T 15-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 XDD1_0689 2d480d45ef801cea551f3fdea6277f60 217 SMART SM00014 81 198 0.0053 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XDD1_0689 2d480d45ef801cea551f3fdea6277f60 217 SUPERFAMILY SSF48317 10 202 1.7E-9 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily XDD1_1974 314862e47df8540357f470b18e399933 217 Pfam PF03737 Aldolase/RraA 43 182 1.9E-26 T 15-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein XDD1_1974 314862e47df8540357f470b18e399933 217 Gene3D G3DSA:3.50.30.40 39 191 7.3E-35 T 15-10-2018 XDD1_1974 314862e47df8540357f470b18e399933 217 SUPERFAMILY SSF89562 49 189 6.93E-33 T 15-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily XDD1_2755 aabe00c1444dad608d5bf4e6cbed41a9 117 Pfam PF05119 Phage terminase, small subunit 15 109 1.0E-19 T 15-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family XDD1_2755 aabe00c1444dad608d5bf4e6cbed41a9 117 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 6 110 1.3E-18 T 15-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family XDD1_3447 e2ea6171b9980cbfb9eb0f2427895921 88 Pfam PF04606 Ogr/Delta-like zinc finger 7 53 1.1E-18 T 15-10-2018 IPR007684 Zinc finger, Ogr/Delta-type XDD1_0075 62fe5df4feae4b021a541a0f389d9309 293 Gene3D G3DSA:3.30.1490.300 82 133 8.9E-7 T 15-10-2018 XDD1_0075 62fe5df4feae4b021a541a0f389d9309 293 Pfam PF11104 Type IV pilus assembly protein PilM; 9 167 3.2E-9 T 15-10-2018 IPR005883 Type IV pilus assembly protein PilM XDD1_0075 62fe5df4feae4b021a541a0f389d9309 293 Gene3D G3DSA:3.30.420.40 8 169 8.9E-7 T 15-10-2018 XDD1_2486 455db2234e7e8d234b9cdb5221e9b8e8 233 SUPERFAMILY SSF52540 6 225 9.58E-68 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2486 455db2234e7e8d234b9cdb5221e9b8e8 233 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 6 224 3.2E-107 T 15-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 XDD1_2486 455db2234e7e8d234b9cdb5221e9b8e8 233 SMART SM00382 35 229 2.9E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_2486 455db2234e7e8d234b9cdb5221e9b8e8 233 Gene3D G3DSA:3.40.50.300 5 229 1.9E-67 T 15-10-2018 XDD1_2486 455db2234e7e8d234b9cdb5221e9b8e8 233 Pfam PF00005 ABC transporter 26 173 5.6E-37 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_2486 455db2234e7e8d234b9cdb5221e9b8e8 233 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_1440 f1d8f53f2087e48f3b0259e896ef6330 240 PIRSF PIRSF005011 1 240 1.6E-139 T 15-10-2018 IPR023604 Uncharacterised protein family SanA XDD1_1440 f1d8f53f2087e48f3b0259e896ef6330 240 Pfam PF02698 DUF218 domain 49 182 3.7E-17 T 15-10-2018 IPR003848 Domain of unknown function DUF218 XDD1_1271 7953d8f58c9e9e4a7c10c55bda82e8ed 619 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 607 1.1E-83 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XDD1_1271 7953d8f58c9e9e4a7c10c55bda82e8ed 619 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 1.0E-46 T 15-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 XDD1_1271 7953d8f58c9e9e4a7c10c55bda82e8ed 619 Gene3D G3DSA:3.40.710.10 249 618 8.8E-95 T 15-10-2018 XDD1_1271 7953d8f58c9e9e4a7c10c55bda82e8ed 619 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 610 4.0E-235 T 15-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XDD1_1271 7953d8f58c9e9e4a7c10c55bda82e8ed 619 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 614 52.158 T 15-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XDD1_1271 7953d8f58c9e9e4a7c10c55bda82e8ed 619 Gene3D G3DSA:3.90.1310.10 65 248 9.2E-53 T 15-10-2018 XDD1_1271 7953d8f58c9e9e4a7c10c55bda82e8ed 619 Gene3D G3DSA:3.30.1390.30 86 161 9.2E-53 T 15-10-2018 XDD1_1271 7953d8f58c9e9e4a7c10c55bda82e8ed 619 SUPERFAMILY SSF56519 58 254 4.45E-52 T 15-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 XDD1_1271 7953d8f58c9e9e4a7c10c55bda82e8ed 619 SUPERFAMILY SSF56601 255 610 9.22E-92 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XDD1_2814 7e3f54ff1203b82ebe88618162ff6fa2 319 Gene3D G3DSA:2.50.20.10 25 211 7.0E-47 T 15-10-2018 XDD1_2814 7e3f54ff1203b82ebe88618162ff6fa2 319 Pfam PF03888 MucB/RseB N-terminal domain 27 209 3.9E-50 T 15-10-2018 IPR033434 MucB/RseB, N-terminal XDD1_2814 7e3f54ff1203b82ebe88618162ff6fa2 319 Gene3D G3DSA:3.30.200.100 220 318 2.2E-27 T 15-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily XDD1_2814 7e3f54ff1203b82ebe88618162ff6fa2 319 PIRSF PIRSF005427 1 319 1.5E-69 T 15-10-2018 IPR005588 MucB/RseB XDD1_2814 7e3f54ff1203b82ebe88618162ff6fa2 319 Pfam PF17188 MucB/RseB C-terminal domain 221 313 1.7E-26 T 15-10-2018 IPR033436 MucB/RseB, C-terminal XDD1_2791 0a9fe0daf9aa2b71dfb18225cb8167d9 410 Pfam PF12832 MFS_1 like family 8 390 2.1E-48 T 15-10-2018 IPR024989 Major facilitator superfamily associated domain XDD1_2791 0a9fe0daf9aa2b71dfb18225cb8167d9 410 Gene3D G3DSA:1.20.1250.20 215 403 7.1E-39 T 15-10-2018 XDD1_2791 0a9fe0daf9aa2b71dfb18225cb8167d9 410 Gene3D G3DSA:1.20.1250.20 3 211 4.0E-13 T 15-10-2018 XDD1_2791 0a9fe0daf9aa2b71dfb18225cb8167d9 410 SUPERFAMILY SSF103473 6 402 1.44E-34 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_2791 0a9fe0daf9aa2b71dfb18225cb8167d9 410 PIRSF PIRSF004925 173 409 5.0E-65 T 15-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter XDD1_2791 0a9fe0daf9aa2b71dfb18225cb8167d9 410 PIRSF PIRSF004925 1 171 2.9E-41 T 15-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter XDD1_2104 117f09f80826c9a401d020f87e7f27a7 851 SUPERFAMILY SSF141729 49 172 1.44E-28 T 15-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 XDD1_2104 117f09f80826c9a401d020f87e7f27a7 851 Gene3D G3DSA:3.10.20.410 66 183 4.7E-34 T 15-10-2018 XDD1_2104 117f09f80826c9a401d020f87e7f27a7 851 Gene3D G3DSA:2.60.40.2070 764 851 5.2E-26 T 15-10-2018 XDD1_2104 117f09f80826c9a401d020f87e7f27a7 851 Pfam PF13953 PapC C-terminal domain 770 836 1.0E-20 T 15-10-2018 IPR025949 PapC-like, C-terminal domain XDD1_2104 117f09f80826c9a401d020f87e7f27a7 851 Pfam PF13954 PapC N-terminal domain 50 195 2.3E-40 T 15-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 XDD1_2104 117f09f80826c9a401d020f87e7f27a7 851 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 320 330 - T 15-10-2018 IPR018030 Fimbrial membrane usher, conserved site XDD1_2104 117f09f80826c9a401d020f87e7f27a7 851 Pfam PF00577 Outer membrane usher protein 212 758 1.0E-188 T 15-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 XDD1_2104 117f09f80826c9a401d020f87e7f27a7 851 Gene3D G3DSA:2.60.40.2610 674 763 1.8E-32 T 15-10-2018 XDD1_2104 117f09f80826c9a401d020f87e7f27a7 851 Gene3D G3DSA:2.60.40.3110 278 367 6.3E-35 T 15-10-2018 XDD1_0306 469023aa4cf0946940e9d738362b9e3b 130 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.057 T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0306 469023aa4cf0946940e9d738362b9e3b 130 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.3E-50 T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0306 469023aa4cf0946940e9d738362b9e3b 130 Gene3D G3DSA:3.90.1030.10 1 117 4.0E-48 T 15-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0306 469023aa4cf0946940e9d738362b9e3b 130 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0306 469023aa4cf0946940e9d738362b9e3b 130 SUPERFAMILY SSF64263 1 118 4.32E-51 T 15-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0306 469023aa4cf0946940e9d738362b9e3b 130 Pfam PF01196 Ribosomal protein L17 20 116 1.2E-34 T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0137 76bd2e28e04d155832b8a17cc8e66cc5 376 Gene3D G3DSA:3.40.50.2000 15 179 1.5E-100 T 15-10-2018 XDD1_0137 76bd2e28e04d155832b8a17cc8e66cc5 376 Pfam PF00534 Glycosyl transferases group 1 195 337 5.1E-30 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 XDD1_0137 76bd2e28e04d155832b8a17cc8e66cc5 376 Gene3D G3DSA:3.40.50.2000 180 335 1.5E-100 T 15-10-2018 XDD1_0137 76bd2e28e04d155832b8a17cc8e66cc5 376 SUPERFAMILY SSF53756 5 372 9.42E-69 T 15-10-2018 XDD1_0137 76bd2e28e04d155832b8a17cc8e66cc5 376 Pfam PF13439 Glycosyltransferase Family 4 17 181 2.6E-19 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XDD1_2828 693f69fc1f9421be03e8356437611413 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 15-10-2018 IPR020081 SsrA-binding protein, conserved site XDD1_2828 693f69fc1f9421be03e8356437611413 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 2.0E-53 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 XDD1_2828 693f69fc1f9421be03e8356437611413 160 Gene3D G3DSA:2.40.280.10 7 135 2.3E-45 T 15-10-2018 IPR023620 Small protein B XDD1_2828 693f69fc1f9421be03e8356437611413 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 3.0E-58 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 XDD1_2828 693f69fc1f9421be03e8356437611413 160 SUPERFAMILY SSF74982 8 138 6.15E-50 T 15-10-2018 IPR023620 Small protein B XDD1_2828 693f69fc1f9421be03e8356437611413 160 Pfam PF01668 SmpB protein 14 157 1.7E-56 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 XDD1_2828 693f69fc1f9421be03e8356437611413 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 71.738 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 XDD1_3644 c97541486ed45f89e3e03c2ca38d8a9b 233 Gene3D G3DSA:3.30.190.20 25 222 1.5E-79 T 15-10-2018 XDD1_3644 c97541486ed45f89e3e03c2ca38d8a9b 233 PIRSF PIRSF002155 1 227 3.5E-79 T 15-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_3644 c97541486ed45f89e3e03c2ca38d8a9b 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 8.3E-107 T 15-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 XDD1_3644 c97541486ed45f89e3e03c2ca38d8a9b 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 15-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_3644 c97541486ed45f89e3e03c2ca38d8a9b 233 Gene3D G3DSA:3.40.50.790 68 159 1.5E-79 T 15-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich XDD1_3644 c97541486ed45f89e3e03c2ca38d8a9b 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 9.4E-51 T 15-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein XDD1_3644 c97541486ed45f89e3e03c2ca38d8a9b 233 SUPERFAMILY SSF56808 6 225 2.35E-82 T 15-10-2018 IPR023674 Ribosomal protein L1-like XDD1_3644 c97541486ed45f89e3e03c2ca38d8a9b 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.26 T 15-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 XDD1_2422 5a2967efefff3dafe73e0a137972b4f2 486 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 485 40.647 T 15-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 XDD1_2422 5a2967efefff3dafe73e0a137972b4f2 486 Gene3D G3DSA:1.25.40.10 290 480 3.6E-14 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_2422 5a2967efefff3dafe73e0a137972b4f2 486 SUPERFAMILY SSF48452 312 457 3.04E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_2422 5a2967efefff3dafe73e0a137972b4f2 486 Pfam PF01435 Peptidase family M48 72 259 1.4E-26 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 XDD1_2422 5a2967efefff3dafe73e0a137972b4f2 486 Gene3D G3DSA:3.30.2010.10 73 151 2.2E-5 T 15-10-2018 XDD1_2422 5a2967efefff3dafe73e0a137972b4f2 486 Pfam PF14559 Tetratricopeptide repeat 354 417 1.2E-7 T 15-10-2018 XDD1_3955 6ddda37958a7172b7c2e3d7e8adabbba 310 Pfam PF04216 Protein involved in formate dehydrogenase formation 24 307 4.6E-113 T 15-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 XDD1_3955 6ddda37958a7172b7c2e3d7e8adabbba 310 Hamap MF_00611 Protein FdhE [fdhE]. 3 309 45.29 T 15-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 XDD1_3955 6ddda37958a7172b7c2e3d7e8adabbba 310 PIRSF PIRSF018296 1 310 2.7E-127 T 15-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 XDD1_3955 6ddda37958a7172b7c2e3d7e8adabbba 310 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 308 5.8E-115 T 15-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 XDD1_3955 6ddda37958a7172b7c2e3d7e8adabbba 310 SUPERFAMILY SSF144020 26 309 1.31E-92 T 15-10-2018 IPR024064 FdhE-like superfamily XDD1_3955 6ddda37958a7172b7c2e3d7e8adabbba 310 Gene3D G3DSA:3.90.1670.10 26 310 2.7E-90 T 15-10-2018 IPR024064 FdhE-like superfamily XDD1_1921 c69b9ebd911b7d169ec8bf620cfc89af 257 Pfam PF12680 SnoaL-like domain 14 103 7.5E-14 T 15-10-2018 IPR037401 SnoaL-like domain XDD1_1921 c69b9ebd911b7d169ec8bf620cfc89af 257 Gene3D G3DSA:3.10.450.50 2 119 2.4E-25 T 15-10-2018 XDD1_1921 c69b9ebd911b7d169ec8bf620cfc89af 257 Gene3D G3DSA:3.10.450.50 130 257 1.0E-21 T 15-10-2018 XDD1_1921 c69b9ebd911b7d169ec8bf620cfc89af 257 SUPERFAMILY SSF54427 8 105 8.01E-20 T 15-10-2018 IPR032710 NTF2-like domain superfamily XDD1_1921 c69b9ebd911b7d169ec8bf620cfc89af 257 SUPERFAMILY SSF54427 134 241 4.96E-14 T 15-10-2018 IPR032710 NTF2-like domain superfamily XDD1_1851 7cb7f26c5b39838cc420741a17cc63dd 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 48.84 T 15-10-2018 IPR022913 Multidrug resistance protein MdtK XDD1_1851 7cb7f26c5b39838cc420741a17cc63dd 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 5.9E-113 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XDD1_1851 7cb7f26c5b39838cc420741a17cc63dd 457 Pfam PF01554 MatE 244 405 1.6E-38 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XDD1_1851 7cb7f26c5b39838cc420741a17cc63dd 457 Pfam PF01554 MatE 17 177 8.0E-36 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XDD1_1851 7cb7f26c5b39838cc420741a17cc63dd 457 PIRSF PIRSF006603 3 455 2.0E-58 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XDD1_2662 4f9f8120800c2b4cd891e3856dab4ea8 208 Gene3D G3DSA:2.60.20.10 6 92 3.4E-17 T 15-10-2018 XDD1_2662 4f9f8120800c2b4cd891e3856dab4ea8 208 Gene3D G3DSA:2.60.40.1720 97 204 2.0E-9 T 15-10-2018 IPR038423 Calcium-dependent cell adhesion molecule, C-terminal domain superfamily XDD1_2662 4f9f8120800c2b4cd891e3856dab4ea8 208 Pfam PF14564 Membrane binding 98 201 2.0E-21 T 15-10-2018 IPR029283 Calcium-dependent cell adhesion molecule 1, membrane-binding domain XDD1_2662 4f9f8120800c2b4cd891e3856dab4ea8 208 Pfam PF08964 Beta/Gamma crystallin 7 92 8.9E-31 T 15-10-2018 IPR015059 Calcium-dependent cell adhesion molecule, N-terminal GO:0016020|GO:0098609 XDD1_2976 98232f8efa664560b1bea000eb0b0452 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 1.7E-13 T 15-10-2018 XDD1_2976 98232f8efa664560b1bea000eb0b0452 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 1.7E-13 T 15-10-2018 XDD1_2976 98232f8efa664560b1bea000eb0b0452 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 1.7E-13 T 15-10-2018 XDD1_2976 98232f8efa664560b1bea000eb0b0452 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.7E-13 T 15-10-2018 XDD1_2976 98232f8efa664560b1bea000eb0b0452 396 Gene3D G3DSA:3.30.9.50 77 266 2.9E-98 T 15-10-2018 XDD1_2976 98232f8efa664560b1bea000eb0b0452 396 SUPERFAMILY SSF51905 1 381 1.19E-54 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_2976 98232f8efa664560b1bea000eb0b0452 396 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 291 304 - T 15-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 XDD1_2976 98232f8efa664560b1bea000eb0b0452 396 Pfam PF01494 FAD binding domain 2 337 7.3E-23 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 XDD1_2976 98232f8efa664560b1bea000eb0b0452 396 Gene3D G3DSA:3.50.50.60 3 335 2.9E-98 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_2976 98232f8efa664560b1bea000eb0b0452 396 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 2 387 1.1E-133 T 15-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 XDD1_2976 98232f8efa664560b1bea000eb0b0452 396 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 2 387 2.1E-150 T 15-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 XDD1_2183 a8da25d455217e4c3edf2ea051ba8c80 333 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 274 280 - T 15-10-2018 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: R-HSA-74217 XDD1_2183 a8da25d455217e4c3edf2ea051ba8c80 333 SUPERFAMILY SSF51556 5 325 1.36E-74 T 15-10-2018 IPR032466 Metal-dependent hydrolase XDD1_2183 a8da25d455217e4c3edf2ea051ba8c80 333 Pfam PF00962 Adenosine/AMP deaminase 6 329 5.5E-90 T 15-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 XDD1_2183 a8da25d455217e4c3edf2ea051ba8c80 333 Hamap MF_00540 Adenosine deaminase [add]. 1 331 53.268 T 15-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 XDD1_2183 a8da25d455217e4c3edf2ea051ba8c80 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 1.4E-107 T 15-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 XDD1_2183 a8da25d455217e4c3edf2ea051ba8c80 333 Gene3D G3DSA:3.20.20.140 4 333 1.4E-95 T 15-10-2018 XDD1_2882 3ce06cac296de2250b94079efcfa6c95 301 Pfam PF13714 Phosphoenolpyruvate phosphomutase 12 253 1.3E-48 T 15-10-2018 XDD1_2882 3ce06cac296de2250b94079efcfa6c95 301 ProSitePatterns PS00161 Isocitrate lyase signature. 121 126 - T 15-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 XDD1_2882 3ce06cac296de2250b94079efcfa6c95 301 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 7 290 3.0E-131 T 15-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 XDD1_2882 3ce06cac296de2250b94079efcfa6c95 301 Gene3D G3DSA:3.20.20.60 4 296 3.8E-102 T 15-10-2018 XDD1_2882 3ce06cac296de2250b94079efcfa6c95 301 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 4 292 49.668 T 15-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 XDD1_2882 3ce06cac296de2250b94079efcfa6c95 301 SUPERFAMILY SSF51621 8 290 5.38E-96 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XDD1_2962 583110f381579f808ae78c69f9398f4c 501 Gene3D G3DSA:1.10.10.10 10 92 1.5E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2962 583110f381579f808ae78c69f9398f4c 501 SUPERFAMILY SSF46785 21 90 2.08E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_2962 583110f381579f808ae78c69f9398f4c 501 Gene3D G3DSA:3.40.640.10 129 491 2.7E-117 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_2962 583110f381579f808ae78c69f9398f4c 501 Pfam PF00155 Aminotransferase class I and II 167 417 7.5E-23 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XDD1_2962 583110f381579f808ae78c69f9398f4c 501 SUPERFAMILY SSF53383 138 498 1.38E-87 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_2962 583110f381579f808ae78c69f9398f4c 501 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 9.0E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_2962 583110f381579f808ae78c69f9398f4c 501 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 9.0E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_2962 583110f381579f808ae78c69f9398f4c 501 SMART SM00345 28 87 1.9E-14 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_2962 583110f381579f808ae78c69f9398f4c 501 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 87 9.2E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_1910 3e6fdc6a41f2b690c99317761487fe5b 131 Pfam PF00893 Small Multidrug Resistance protein 25 115 2.2E-29 T 15-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 XDD1_1910 3e6fdc6a41f2b690c99317761487fe5b 131 Gene3D G3DSA:1.10.3730.20 22 131 3.0E-38 T 15-10-2018 XDD1_1910 3e6fdc6a41f2b690c99317761487fe5b 131 SUPERFAMILY SSF103481 27 127 9.02E-21 T 15-10-2018 XDD1_2717 a6664b8d2c98038705db85ffde5089e9 412 Gene3D G3DSA:3.30.70.250 134 204 4.5E-57 T 15-10-2018 XDD1_2717 a6664b8d2c98038705db85ffde5089e9 412 Pfam PF00698 Acyl transferase domain 11 292 4.0E-14 T 15-10-2018 IPR014043 Acyl transferase XDD1_2717 a6664b8d2c98038705db85ffde5089e9 412 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 13 310 2.7E-16 T 15-10-2018 IPR020801 Polyketide synthase, acyl transferase domain XDD1_2717 a6664b8d2c98038705db85ffde5089e9 412 SUPERFAMILY SSF52151 9 298 8.63E-44 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase XDD1_2717 a6664b8d2c98038705db85ffde5089e9 412 Gene3D G3DSA:3.40.366.10 12 296 4.5E-57 T 15-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 XDD1_2717 a6664b8d2c98038705db85ffde5089e9 412 SUPERFAMILY SSF55048 135 202 8.89E-5 T 15-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding XDD1_0926 9598eb1de14b56d512b2d800b963a082 259 SUPERFAMILY SSF51735 2 232 5.72E-57 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0926 9598eb1de14b56d512b2d800b963a082 259 Pfam PF00106 short chain dehydrogenase 3 191 9.9E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0926 9598eb1de14b56d512b2d800b963a082 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 3.7E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0926 9598eb1de14b56d512b2d800b963a082 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 3.7E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0926 9598eb1de14b56d512b2d800b963a082 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 3.7E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0926 9598eb1de14b56d512b2d800b963a082 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 182 0.0078 T 15-10-2018 XDD1_0926 9598eb1de14b56d512b2d800b963a082 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XDD1_0926 9598eb1de14b56d512b2d800b963a082 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 5.2E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0926 9598eb1de14b56d512b2d800b963a082 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 5.2E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0926 9598eb1de14b56d512b2d800b963a082 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 5.2E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0926 9598eb1de14b56d512b2d800b963a082 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.2E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0926 9598eb1de14b56d512b2d800b963a082 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 5.2E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0926 9598eb1de14b56d512b2d800b963a082 259 Gene3D G3DSA:3.40.50.720 2 250 2.5E-63 T 15-10-2018 XDD1_0155 c43b650ad797bd8a8d7ca5e415800aee 145 Gene3D G3DSA:3.40.250.10 39 144 1.8E-21 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily XDD1_0155 c43b650ad797bd8a8d7ca5e415800aee 145 Pfam PF00581 Rhodanese-like domain 49 134 6.0E-14 T 15-10-2018 IPR001763 Rhodanese-like domain XDD1_0155 c43b650ad797bd8a8d7ca5e415800aee 145 SMART SM00450 41 139 1.3E-15 T 15-10-2018 IPR001763 Rhodanese-like domain XDD1_0155 c43b650ad797bd8a8d7ca5e415800aee 145 SUPERFAMILY SSF52821 16 143 1.96E-27 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily XDD1_0735 3bac7b657cadbcc14583ad27b989ad16 182 Gene3D G3DSA:2.60.40.1090 52 182 9.8E-32 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 XDD1_0735 3bac7b657cadbcc14583ad27b989ad16 182 SUPERFAMILY SSF49401 40 182 3.13E-34 T 15-10-2018 IPR008966 Adhesion domain superfamily XDD1_0735 3bac7b657cadbcc14583ad27b989ad16 182 Pfam PF00419 Fimbrial protein 42 182 1.3E-16 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 XDD1_2297 008c88434bf62900f130b39e873b7bd5 170 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 90 167 4.0E-8 T 15-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 XDD1_2297 008c88434bf62900f130b39e873b7bd5 170 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 1 168 1.7E-94 T 15-10-2018 IPR022523 Flagellar regulator, FliZ XDD1_1101 5648bf8618c7dc1787994af19cc6ecb4 390 Pfam PF00294 pfkB family carbohydrate kinase 71 358 3.5E-54 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB XDD1_1101 5648bf8618c7dc1787994af19cc6ecb4 390 Pfam PF13412 Winged helix-turn-helix DNA-binding 13 57 2.4E-11 T 15-10-2018 XDD1_1101 5648bf8618c7dc1787994af19cc6ecb4 390 SUPERFAMILY SSF46785 13 66 3.84E-9 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1101 5648bf8618c7dc1787994af19cc6ecb4 390 Gene3D G3DSA:1.10.10.10 8 61 4.2E-9 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1101 5648bf8618c7dc1787994af19cc6ecb4 390 SUPERFAMILY SSF53613 73 355 1.56E-54 T 15-10-2018 IPR029056 Ribokinase-like XDD1_1101 5648bf8618c7dc1787994af19cc6ecb4 390 Gene3D G3DSA:3.40.1190.20 70 368 4.4E-72 T 15-10-2018 IPR029056 Ribokinase-like XDD1_0385 dab1b0fb72c16e4e0f565d94bb31dc75 464 ProSitePatterns PS00217 Sugar transport proteins signature 2. 144 169 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 XDD1_0385 dab1b0fb72c16e4e0f565d94bb31dc75 464 Gene3D G3DSA:1.20.1250.20 31 463 3.0E-62 T 15-10-2018 XDD1_0385 dab1b0fb72c16e4e0f565d94bb31dc75 464 Pfam PF00083 Sugar (and other) transporter 77 461 2.5E-28 T 15-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 XDD1_0385 dab1b0fb72c16e4e0f565d94bb31dc75 464 SUPERFAMILY SSF103473 24 458 5.23E-61 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1154 631500af323ba502fe591e7a4d90a58c 231 PIRSF PIRSF004848 1 231 1.6E-77 T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 XDD1_1154 631500af323ba502fe591e7a4d90a58c 231 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 XDD1_1154 631500af323ba502fe591e7a4d90a58c 231 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 227 3.0E-93 T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 XDD1_1154 631500af323ba502fe591e7a4d90a58c 231 SUPERFAMILY SSF51419 1 225 8.11E-82 T 15-10-2018 IPR029066 PLP-binding barrel XDD1_1154 631500af323ba502fe591e7a4d90a58c 231 Pfam PF01168 Alanine racemase, N-terminal domain 8 227 3.3E-27 T 15-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_1154 631500af323ba502fe591e7a4d90a58c 231 Gene3D G3DSA:3.20.20.10 1 231 9.9E-84 T 15-10-2018 IPR029066 PLP-binding barrel XDD1_1154 631500af323ba502fe591e7a4d90a58c 231 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 226 34.241 T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 XDD1_1610 aedcf14cd5db06a6c97e4546d743d838 208 PIRSF PIRSF028788 2 204 3.2E-53 T 15-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type XDD1_1610 aedcf14cd5db06a6c97e4546d743d838 208 Pfam PF04994 TfoX C-terminal domain 118 194 3.9E-28 T 15-10-2018 IPR007077 TfoX, C-terminal XDD1_1610 aedcf14cd5db06a6c97e4546d743d838 208 Gene3D G3DSA:3.30.1460.30 7 106 3.9E-27 T 15-10-2018 XDD1_1610 aedcf14cd5db06a6c97e4546d743d838 208 Gene3D G3DSA:1.10.150.20 117 205 6.3E-27 T 15-10-2018 XDD1_1610 aedcf14cd5db06a6c97e4546d743d838 208 SUPERFAMILY SSF159894 11 106 3.14E-26 T 15-10-2018 XDD1_1610 aedcf14cd5db06a6c97e4546d743d838 208 Pfam PF04993 TfoX N-terminal domain 15 103 8.3E-27 T 15-10-2018 IPR007076 TfoX, N-terminal XDD1_2209 f92d72697048944aab7131c2be052ecf 348 SUPERFAMILY SSF52096 98 295 4.86E-30 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XDD1_2209 f92d72697048944aab7131c2be052ecf 348 Pfam PF01343 Peptidase family S49 160 301 1.1E-43 T 15-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 XDD1_2209 f92d72697048944aab7131c2be052ecf 348 Gene3D G3DSA:3.40.1750.20 201 265 5.1E-43 T 15-10-2018 XDD1_2209 f92d72697048944aab7131c2be052ecf 348 Pfam PF08496 Peptidase family S49 N-terminal 2 157 2.3E-58 T 15-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 XDD1_2209 f92d72697048944aab7131c2be052ecf 348 Gene3D G3DSA:3.90.226.10 110 300 5.1E-43 T 15-10-2018 XDD1_0559 ab9bfe3f69908abbdd590a03474b4d78 297 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 294 4.9E-50 T 15-10-2018 IPR010106 Recombination-promoting nuclease RpnA XDD1_0559 ab9bfe3f69908abbdd590a03474b4d78 297 Pfam PF04754 Putative transposase, YhgA-like 9 210 5.8E-77 T 15-10-2018 IPR006842 Transposase (putative), YhgA-like XDD1_1216 ae9b2c772b873d39bf10d38ebf29a511 364 Pfam PF00793 DAHP synthetase I family 44 342 4.5E-99 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XDD1_1216 ae9b2c772b873d39bf10d38ebf29a511 364 Gene3D G3DSA:3.20.20.70 5 352 7.2E-152 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_1216 ae9b2c772b873d39bf10d38ebf29a511 364 SUPERFAMILY SSF51569 10 348 7.14E-134 T 15-10-2018 XDD1_1216 ae9b2c772b873d39bf10d38ebf29a511 364 PIRSF PIRSF001361 1 356 2.6E-159 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 XDD1_1216 ae9b2c772b873d39bf10d38ebf29a511 364 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 350 7.9E-162 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 XDD1_0514 070916e7fc984818dec3e271f0e87d15 305 SUPERFAMILY SSF56281 1 304 1.83E-84 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XDD1_0514 070916e7fc984818dec3e271f0e87d15 305 Pfam PF12706 Beta-lactamase superfamily domain 36 153 4.9E-10 T 15-10-2018 IPR001279 Metallo-beta-lactamase XDD1_0514 070916e7fc984818dec3e271f0e87d15 305 Pfam PF12706 Beta-lactamase superfamily domain 195 270 1.8E-7 T 15-10-2018 IPR001279 Metallo-beta-lactamase XDD1_0514 070916e7fc984818dec3e271f0e87d15 305 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 303 1.9E-107 T 15-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 XDD1_0514 070916e7fc984818dec3e271f0e87d15 305 Hamap MF_01818 Ribonuclease BN [rbn]. 1 304 39.899 T 15-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 XDD1_0514 070916e7fc984818dec3e271f0e87d15 305 Gene3D G3DSA:3.60.15.10 1 304 2.4E-107 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XDD1_0150 99a4d0eeca55f3f8a9451a4cedd0c105 437 Pfam PF01551 Peptidase family M23 338 431 6.4E-27 T 15-10-2018 IPR016047 Peptidase M23 XDD1_0150 99a4d0eeca55f3f8a9451a4cedd0c105 437 SUPERFAMILY SSF51261 241 435 6.28E-48 T 15-10-2018 IPR011055 Duplicated hybrid motif XDD1_0150 99a4d0eeca55f3f8a9451a4cedd0c105 437 Gene3D G3DSA:2.70.70.10 297 436 4.9E-39 T 15-10-2018 IPR011055 Duplicated hybrid motif XDD1_2556 ac6746b955c4e5b80335cbfb6cee1d60 376 Gene3D G3DSA:1.10.620.20 2 340 3.0E-150 T 15-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 XDD1_2556 ac6746b955c4e5b80335cbfb6cee1d60 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 15-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XDD1_2556 ac6746b955c4e5b80335cbfb6cee1d60 376 SUPERFAMILY SSF47240 3 340 7.58E-115 T 15-10-2018 IPR009078 Ferritin-like superfamily XDD1_2556 ac6746b955c4e5b80335cbfb6cee1d60 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 8.8E-49 T 15-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XDD1_1858 f8185ff148c6dbd06571c03c7750af71 192 Gene3D G3DSA:2.40.500.20 83 192 1.5E-44 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_1858 f8185ff148c6dbd06571c03c7750af71 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 3.4E-34 T 15-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_1858 f8185ff148c6dbd06571c03c7750af71 192 SUPERFAMILY SSF46609 1 84 2.49E-35 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_1858 f8185ff148c6dbd06571c03c7750af71 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 6.7E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_1858 f8185ff148c6dbd06571c03c7750af71 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 6.7E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_1858 f8185ff148c6dbd06571c03c7750af71 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 6.7E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_1858 f8185ff148c6dbd06571c03c7750af71 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 6.7E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_1858 f8185ff148c6dbd06571c03c7750af71 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 6.7E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_1858 f8185ff148c6dbd06571c03c7750af71 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 15-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_1858 f8185ff148c6dbd06571c03c7750af71 192 SUPERFAMILY SSF54719 82 191 2.75E-44 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_1858 f8185ff148c6dbd06571c03c7750af71 192 PIRSF PIRSF000349 1 192 1.5E-86 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_1858 f8185ff148c6dbd06571c03c7750af71 192 Gene3D G3DSA:1.10.287.990 20 82 2.8E-25 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_1858 f8185ff148c6dbd06571c03c7750af71 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 4.3E-41 T 15-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XDD1_3256 dc8dc9c77d8b40404a87e43b8772687f 170 Pfam PF01475 Ferric uptake regulator family 20 139 5.1E-17 T 15-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 XDD1_3256 dc8dc9c77d8b40404a87e43b8772687f 170 Gene3D G3DSA:3.30.1490.190 90 152 4.6E-15 T 15-10-2018 XDD1_3256 dc8dc9c77d8b40404a87e43b8772687f 170 Gene3D G3DSA:1.10.10.10 1 89 1.4E-34 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3256 dc8dc9c77d8b40404a87e43b8772687f 170 SUPERFAMILY SSF46785 12 143 2.57E-32 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_2652 a202ba620156821e13d487e198917085 232 Pfam PF09335 SNARE associated Golgi protein 56 184 1.7E-25 T 15-10-2018 IPR032816 SNARE associated Golgi protein XDD1_1308 22d0a8d507d135bf81a717f7177d1e93 724 Pfam PF00664 ABC transporter transmembrane region 174 440 2.3E-46 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XDD1_1308 22d0a8d507d135bf81a717f7177d1e93 724 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 25 723 0.0 T 15-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 XDD1_1308 22d0a8d507d135bf81a717f7177d1e93 724 Gene3D G3DSA:3.40.50.300 480 724 3.0E-88 T 15-10-2018 XDD1_1308 22d0a8d507d135bf81a717f7177d1e93 724 ProSitePatterns PS00211 ABC transporters family signature. 624 638 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_1308 22d0a8d507d135bf81a717f7177d1e93 724 Gene3D G3DSA:3.90.70.10 23 127 1.9E-11 T 15-10-2018 XDD1_1308 22d0a8d507d135bf81a717f7177d1e93 724 SUPERFAMILY SSF52540 478 722 4.11E-88 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1308 22d0a8d507d135bf81a717f7177d1e93 724 Pfam PF00005 ABC transporter 503 652 3.0E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1308 22d0a8d507d135bf81a717f7177d1e93 724 SMART SM00382 512 698 3.1E-20 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1308 22d0a8d507d135bf81a717f7177d1e93 724 Pfam PF03412 Peptidase C39 family 24 119 6.0E-8 T 15-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 XDD1_1308 22d0a8d507d135bf81a717f7177d1e93 724 Gene3D G3DSA:1.20.1560.10 160 472 1.5E-70 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_1308 22d0a8d507d135bf81a717f7177d1e93 724 SUPERFAMILY SSF90123 159 470 9.55E-65 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_1760 3b592557baf7de2167fc6393f273521c 304 PRINTS PR00690 Adhesin family signature 65 78 1.6E-45 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 XDD1_1760 3b592557baf7de2167fc6393f273521c 304 PRINTS PR00690 Adhesin family signature 34 52 1.6E-45 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 XDD1_1760 3b592557baf7de2167fc6393f273521c 304 PRINTS PR00690 Adhesin family signature 189 210 1.6E-45 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 XDD1_1760 3b592557baf7de2167fc6393f273521c 304 PRINTS PR00690 Adhesin family signature 242 260 1.6E-45 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 XDD1_1760 3b592557baf7de2167fc6393f273521c 304 PRINTS PR00690 Adhesin family signature 78 95 1.6E-45 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 XDD1_1760 3b592557baf7de2167fc6393f273521c 304 PRINTS PR00690 Adhesin family signature 268 287 1.6E-45 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 XDD1_1760 3b592557baf7de2167fc6393f273521c 304 SUPERFAMILY SSF53807 30 303 1.81E-92 T 15-10-2018 XDD1_1760 3b592557baf7de2167fc6393f273521c 304 Pfam PF01297 Zinc-uptake complex component A periplasmic 37 300 1.2E-79 T 15-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 XDD1_1760 3b592557baf7de2167fc6393f273521c 304 PRINTS PR00691 Adhesin B signature 189 206 7.6E-39 T 15-10-2018 IPR006129 Adhesin B GO:0007155 XDD1_1760 3b592557baf7de2167fc6393f273521c 304 PRINTS PR00691 Adhesin B signature 34 55 7.6E-39 T 15-10-2018 IPR006129 Adhesin B GO:0007155 XDD1_1760 3b592557baf7de2167fc6393f273521c 304 PRINTS PR00691 Adhesin B signature 59 77 7.6E-39 T 15-10-2018 IPR006129 Adhesin B GO:0007155 XDD1_1760 3b592557baf7de2167fc6393f273521c 304 PRINTS PR00691 Adhesin B signature 260 278 7.6E-39 T 15-10-2018 IPR006129 Adhesin B GO:0007155 XDD1_1760 3b592557baf7de2167fc6393f273521c 304 PRINTS PR00691 Adhesin B signature 78 97 7.6E-39 T 15-10-2018 IPR006129 Adhesin B GO:0007155 XDD1_1760 3b592557baf7de2167fc6393f273521c 304 PRINTS PR00691 Adhesin B signature 215 233 7.6E-39 T 15-10-2018 IPR006129 Adhesin B GO:0007155 XDD1_1760 3b592557baf7de2167fc6393f273521c 304 PRINTS PR00691 Adhesin B signature 238 255 7.6E-39 T 15-10-2018 IPR006129 Adhesin B GO:0007155 XDD1_1760 3b592557baf7de2167fc6393f273521c 304 Gene3D G3DSA:3.40.50.1980 33 190 2.9E-55 T 15-10-2018 XDD1_1760 3b592557baf7de2167fc6393f273521c 304 Gene3D G3DSA:3.40.50.1980 191 304 1.9E-42 T 15-10-2018 XDD1_0750 cc1720f2231d74e7d597a38b4f47bbad 317 Gene3D G3DSA:3.40.50.11270 12 97 1.1E-110 T 15-10-2018 XDD1_0750 cc1720f2231d74e7d597a38b4f47bbad 317 Pfam PF02401 LytB protein 3 284 6.6E-92 T 15-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 XDD1_0750 cc1720f2231d74e7d597a38b4f47bbad 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 1.7E-98 T 15-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 XDD1_0750 cc1720f2231d74e7d597a38b4f47bbad 317 Gene3D G3DSA:3.40.1010.20 6 283 1.1E-110 T 15-10-2018 XDD1_0750 cc1720f2231d74e7d597a38b4f47bbad 317 Gene3D G3DSA:3.40.1010.20 98 197 1.1E-110 T 15-10-2018 XDD1_0750 cc1720f2231d74e7d597a38b4f47bbad 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 36.971 T 15-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 XDD1_1442 6ec1182c57c31a296a8ddc973bfa6073 294 SUPERFAMILY SSF53927 155 291 3.72E-39 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 XDD1_1442 6ec1182c57c31a296a8ddc973bfa6073 294 Gene3D G3DSA:3.40.140.10 180 293 6.4E-30 T 15-10-2018 XDD1_1442 6ec1182c57c31a296a8ddc973bfa6073 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 48.952 T 15-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 XDD1_1442 6ec1182c57c31a296a8ddc973bfa6073 294 SUPERFAMILY SSF53927 1 145 4.18E-43 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 XDD1_1442 6ec1182c57c31a296a8ddc973bfa6073 294 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 31 285 1.9E-87 T 15-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 XDD1_1442 6ec1182c57c31a296a8ddc973bfa6073 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 8.1E-46 T 15-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 XDD1_1442 6ec1182c57c31a296a8ddc973bfa6073 294 Gene3D G3DSA:3.40.140.10 29 179 2.6E-42 T 15-10-2018 XDD1_1442 6ec1182c57c31a296a8ddc973bfa6073 294 PIRSF PIRSF006334 14 294 1.2E-108 T 15-10-2018 XDD1_1442 6ec1182c57c31a296a8ddc973bfa6073 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 XDD1_1442 6ec1182c57c31a296a8ddc973bfa6073 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 61 140 1.9E-12 T 15-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain XDD1_3540 4a9783b665508c35a472f265d045e0ff 317 SUPERFAMILY SSF51735 104 285 5.03E-46 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_3540 4a9783b665508c35a472f265d045e0ff 317 Gene3D G3DSA:3.40.50.720 104 301 3.3E-99 T 15-10-2018 XDD1_3540 4a9783b665508c35a472f265d045e0ff 317 Gene3D G3DSA:3.40.50.720 4 309 3.3E-99 T 15-10-2018 XDD1_3540 4a9783b665508c35a472f265d045e0ff 317 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 285 4.3E-45 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 XDD1_3540 4a9783b665508c35a472f265d045e0ff 317 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 311 3.6E-16 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 XDD1_3540 4a9783b665508c35a472f265d045e0ff 317 SUPERFAMILY SSF52283 1 135 1.66E-19 T 15-10-2018 XDD1_3023 949712897190716cffc53e29c8c8e437 495 SUPERFAMILY SSF53623 105 336 3.4E-75 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XDD1_3023 949712897190716cffc53e29c8c8e437 495 Pfam PF01225 Mur ligase family, catalytic domain 25 102 1.0E-12 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 XDD1_3023 949712897190716cffc53e29c8c8e437 495 Gene3D G3DSA:3.90.190.20 342 493 3.8E-54 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XDD1_3023 949712897190716cffc53e29c8c8e437 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 490 5.1E-167 T 15-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 XDD1_3023 949712897190716cffc53e29c8c8e437 495 Gene3D G3DSA:3.40.1190.10 105 341 9.2E-85 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XDD1_3023 949712897190716cffc53e29c8c8e437 495 SUPERFAMILY SSF53244 339 490 8.7E-50 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XDD1_3023 949712897190716cffc53e29c8c8e437 495 Gene3D G3DSA:3.40.1390.10 2 104 1.1E-34 T 15-10-2018 XDD1_3023 949712897190716cffc53e29c8c8e437 495 Pfam PF08245 Mur ligase middle domain 114 318 2.6E-50 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XDD1_3023 949712897190716cffc53e29c8c8e437 495 SUPERFAMILY SSF63418 5 104 3.14E-25 T 15-10-2018 IPR035911 MurE/MurF, N-terminal XDD1_3023 949712897190716cffc53e29c8c8e437 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 424 3.9E-24 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 XDD1_3023 949712897190716cffc53e29c8c8e437 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 34.234 T 15-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 XDD1_2416 363224aa1920f272f582d729a0a0081f 315 SUPERFAMILY SSF51569 24 309 3.04E-92 T 15-10-2018 XDD1_2416 363224aa1920f272f582d729a0a0081f 315 Pfam PF00701 Dihydrodipicolinate synthetase family 24 311 1.1E-108 T 15-10-2018 IPR002220 DapA-like GO:0016829 XDD1_2416 363224aa1920f272f582d729a0a0081f 315 SMART SM01130 23 313 1.9E-131 T 15-10-2018 IPR002220 DapA-like GO:0016829 XDD1_2416 363224aa1920f272f582d729a0a0081f 315 Gene3D G3DSA:3.20.20.70 22 315 8.8E-108 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_2416 363224aa1920f272f582d729a0a0081f 315 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 155 185 - T 15-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 XDD1_2416 363224aa1920f272f582d729a0a0081f 315 PRINTS PR00146 Dihydrodipicolinate synthase signature 125 141 1.6E-33 T 15-10-2018 IPR002220 DapA-like GO:0016829 XDD1_2416 363224aa1920f272f582d729a0a0081f 315 PRINTS PR00146 Dihydrodipicolinate synthase signature 150 167 1.6E-33 T 15-10-2018 IPR002220 DapA-like GO:0016829 XDD1_2416 363224aa1920f272f582d729a0a0081f 315 PRINTS PR00146 Dihydrodipicolinate synthase signature 93 111 1.6E-33 T 15-10-2018 IPR002220 DapA-like GO:0016829 XDD1_2416 363224aa1920f272f582d729a0a0081f 315 PRINTS PR00146 Dihydrodipicolinate synthase signature 57 78 1.6E-33 T 15-10-2018 IPR002220 DapA-like GO:0016829 XDD1_2416 363224aa1920f272f582d729a0a0081f 315 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 23 311 61.607 T 15-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XDD1_2416 363224aa1920f272f582d729a0a0081f 315 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 26 310 1.2E-111 T 15-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XDD1_2416 363224aa1920f272f582d729a0a0081f 315 PIRSF PIRSF001365 20 315 4.7E-89 T 15-10-2018 IPR002220 DapA-like GO:0016829 XDD1_0481 eb3ca6ee010368c1165c53c110879891 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.716 T 15-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0481 eb3ca6ee010368c1165c53c110879891 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 15-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0481 eb3ca6ee010368c1165c53c110879891 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 3.3E-38 T 15-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0481 eb3ca6ee010368c1165c53c110879891 89 Pfam PF00312 Ribosomal protein S15 8 88 5.2E-36 T 15-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0481 eb3ca6ee010368c1165c53c110879891 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 8.0E-33 T 15-10-2018 XDD1_0481 eb3ca6ee010368c1165c53c110879891 89 SMART SM01387 8 88 9.9E-50 T 15-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0481 eb3ca6ee010368c1165c53c110879891 89 Gene3D G3DSA:1.10.287.10 2 89 7.0E-36 T 15-10-2018 XDD1_0481 eb3ca6ee010368c1165c53c110879891 89 SUPERFAMILY SSF47060 3 89 1.29E-33 T 15-10-2018 IPR009068 S15/NS1, RNA-binding XDD1_0787 f5db5f333041eb56ae239f7d4ff9d479 107 Pfam PF01371 Trp repressor protein 18 103 2.5E-28 T 15-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 XDD1_0787 f5db5f333041eb56ae239f7d4ff9d479 107 Hamap MF_00475 Trp operon repressor [trpR]. 15 107 21.381 T 15-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 XDD1_0787 f5db5f333041eb56ae239f7d4ff9d479 107 PIRSF PIRSF003196 3 107 8.8E-39 T 15-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 XDD1_0787 f5db5f333041eb56ae239f7d4ff9d479 107 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 10 101 1.0E-34 T 15-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 XDD1_0787 f5db5f333041eb56ae239f7d4ff9d479 107 SUPERFAMILY SSF48295 5 104 9.94E-29 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 XDD1_0787 f5db5f333041eb56ae239f7d4ff9d479 107 Gene3D G3DSA:1.10.1270.10 9 107 8.9E-37 T 15-10-2018 IPR038116 TrpR-like superfamily XDD1_0787 f5db5f333041eb56ae239f7d4ff9d479 107 TIGRFAM TIGR01321 TrpR: trp operon repressor 15 104 1.1E-33 T 15-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 XDD1_2509 fc368d854bc154f6d0a1d5fd7630cd0d 197 PIRSF PIRSF006305 1 193 4.5E-38 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 XDD1_2509 fc368d854bc154f6d0a1d5fd7630cd0d 197 Gene3D G3DSA:3.90.950.10 3 194 1.3E-57 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XDD1_2509 fc368d854bc154f6d0a1d5fd7630cd0d 197 SUPERFAMILY SSF52972 2 185 7.19E-57 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XDD1_2509 fc368d854bc154f6d0a1d5fd7630cd0d 197 Pfam PF02545 Maf-like protein 4 184 6.3E-42 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 XDD1_2509 fc368d854bc154f6d0a1d5fd7630cd0d 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 28.787 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 XDD1_2509 fc368d854bc154f6d0a1d5fd7630cd0d 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 184 1.1E-53 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 XDD1_2567 2bb04edd4ff5c365df0df642a6ed49cf 336 Gene3D G3DSA:3.30.390.10 5 307 1.6E-123 T 15-10-2018 IPR029017 Enolase-like, N-terminal XDD1_2567 2bb04edd4ff5c365df0df642a6ed49cf 336 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 5 331 21.971 T 15-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 XDD1_2567 2bb04edd4ff5c365df0df642a6ed49cf 336 SUPERFAMILY SSF51604 113 310 1.11E-48 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily XDD1_2567 2bb04edd4ff5c365df0df642a6ed49cf 336 SMART SM00922 120 215 1.1E-9 T 15-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal XDD1_2567 2bb04edd4ff5c365df0df642a6ed49cf 336 Pfam PF13378 Enolase C-terminal domain-like 130 281 5.4E-17 T 15-10-2018 IPR029065 Enolase C-terminal domain-like XDD1_2567 2bb04edd4ff5c365df0df642a6ed49cf 336 Gene3D G3DSA:3.20.20.120 103 300 1.6E-123 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily XDD1_2567 2bb04edd4ff5c365df0df642a6ed49cf 336 SUPERFAMILY SSF54826 2 104 1.19E-25 T 15-10-2018 XDD1_2567 2bb04edd4ff5c365df0df642a6ed49cf 336 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 8 311 4.0E-107 T 15-10-2018 XDD1_2170 adfc019ba729f2335a67a2f96db341d5 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XDD1_2170 adfc019ba729f2335a67a2f96db341d5 248 SUPERFAMILY SSF51735 2 230 7.25E-62 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2170 adfc019ba729f2335a67a2f96db341d5 248 Gene3D G3DSA:3.40.50.720 1 235 3.4E-67 T 15-10-2018 XDD1_2170 adfc019ba729f2335a67a2f96db341d5 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 9.5E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2170 adfc019ba729f2335a67a2f96db341d5 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 9.5E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2170 adfc019ba729f2335a67a2f96db341d5 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 9.5E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2170 adfc019ba729f2335a67a2f96db341d5 248 Pfam PF00106 short chain dehydrogenase 2 188 5.0E-55 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2170 adfc019ba729f2335a67a2f96db341d5 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 2.4E-20 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2170 adfc019ba729f2335a67a2f96db341d5 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.4E-20 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2170 adfc019ba729f2335a67a2f96db341d5 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.4E-20 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2170 adfc019ba729f2335a67a2f96db341d5 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 2.4E-20 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2170 adfc019ba729f2335a67a2f96db341d5 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 2.4E-20 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_1741 a66cb3027a23c438ccddca30cfb2cdce 220 SUPERFAMILY SSF46689 5 116 4.96E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1741 a66cb3027a23c438ccddca30cfb2cdce 220 Pfam PF13936 Helix-turn-helix domain 3 45 3.6E-15 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_1993 82e2263145b580e545933bcb1e0dacc1 192 Gene3D G3DSA:3.40.50.360 1 192 1.1E-60 T 15-10-2018 IPR029039 Flavoprotein-like superfamily XDD1_1993 82e2263145b580e545933bcb1e0dacc1 192 Pfam PF02525 Flavodoxin-like fold 3 188 1.6E-35 T 15-10-2018 IPR003680 Flavodoxin-like fold XDD1_1993 82e2263145b580e545933bcb1e0dacc1 192 SUPERFAMILY SSF52218 2 192 1.15E-39 T 15-10-2018 IPR029039 Flavoprotein-like superfamily XDD1_1927 8de82bf921b9accd74362572a4813316 514 Gene3D G3DSA:3.30.9.10 201 423 4.0E-61 T 15-10-2018 XDD1_1927 8de82bf921b9accd74362572a4813316 514 SUPERFAMILY SSF51905 104 396 9.81E-36 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1927 8de82bf921b9accd74362572a4813316 514 Gene3D G3DSA:3.50.50.60 108 462 4.0E-61 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1927 8de82bf921b9accd74362572a4813316 514 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 0.0016 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal XDD1_1927 8de82bf921b9accd74362572a4813316 514 Pfam PF01266 FAD dependent oxidoreductase 108 462 5.1E-45 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 XDD1_1234 a04e78fe4c460e2fa71d5c74deec6f27 346 SUPERFAMILY SSF75217 189 344 2.35E-39 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases XDD1_1234 a04e78fe4c460e2fa71d5c74deec6f27 346 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 110 181 6.2E-12 T 15-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 XDD1_1234 a04e78fe4c460e2fa71d5c74deec6f27 346 Gene3D G3DSA:3.40.1280.10 177 346 1.2E-42 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XDD1_1234 a04e78fe4c460e2fa71d5c74deec6f27 346 Pfam PF00588 SpoU rRNA Methylase family 199 337 3.3E-30 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 XDD1_1234 a04e78fe4c460e2fa71d5c74deec6f27 346 SMART SM00967 109 184 6.2E-8 T 15-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 XDD1_1234 a04e78fe4c460e2fa71d5c74deec6f27 346 PIRSF PIRSF006280 1 68 7.9E-6 T 15-10-2018 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 XDD1_1234 a04e78fe4c460e2fa71d5c74deec6f27 346 PIRSF PIRSF006280 19 346 5.2E-148 T 15-10-2018 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 XDD1_1234 a04e78fe4c460e2fa71d5c74deec6f27 346 SUPERFAMILY SSF55315 107 179 3.3E-9 T 15-10-2018 IPR029064 50S ribosomal protein L30e-like XDD1_1172 10cc529d8ffe6772baa987a42b4c5753 412 Pfam PF03116 NQR2, RnfD, RnfE family 41 405 2.3E-107 T 15-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 XDD1_1172 10cc529d8ffe6772baa987a42b4c5753 412 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 5.6E-198 T 15-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 XDD1_1172 10cc529d8ffe6772baa987a42b4c5753 412 PIRSF PIRSF016055 1 412 1.7E-199 T 15-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 XDD1_1172 10cc529d8ffe6772baa987a42b4c5753 412 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.973 T 15-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 XDD1_3122 2d28e1a4e11a2f0805c6c9535bc04dfd 232 Pfam PF01048 Phosphorylase superfamily 2 226 4.3E-47 T 15-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 XDD1_3122 2d28e1a4e11a2f0805c6c9535bc04dfd 232 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 45.95 T 15-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 XDD1_3122 2d28e1a4e11a2f0805c6c9535bc04dfd 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 227 8.0E-109 T 15-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 XDD1_3122 2d28e1a4e11a2f0805c6c9535bc04dfd 232 Gene3D G3DSA:3.40.50.1580 1 232 1.2E-67 T 15-10-2018 XDD1_3122 2d28e1a4e11a2f0805c6c9535bc04dfd 232 SUPERFAMILY SSF53167 1 228 4.19E-72 T 15-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 XDD1_3701 f2aa2f2222afec3c3c1f4f0408762f05 389 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 173 254 2.8E-23 T 15-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 XDD1_3701 f2aa2f2222afec3c3c1f4f0408762f05 389 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 34 64 1.0E-7 T 15-10-2018 IPR006530 YD repeat XDD1_3701 f2aa2f2222afec3c3c1f4f0408762f05 389 Pfam PF03527 RHS protein 145 179 1.1E-6 T 15-10-2018 IPR001826 RHS protein XDD1_3701 f2aa2f2222afec3c3c1f4f0408762f05 389 Pfam PF05593 RHS Repeat 9 49 1.3E-5 T 15-10-2018 IPR031325 RHS repeat XDD1_3701 f2aa2f2222afec3c3c1f4f0408762f05 389 Gene3D G3DSA:2.180.10.10 4 254 3.1E-34 T 15-10-2018 XDD1_1558 0bae800df5ebface5ccae9130a233394 1073 SUPERFAMILY SSF46785 1005 1070 2.45E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1558 0bae800df5ebface5ccae9130a233394 1073 Pfam PF09397 Ftsk gamma domain 1007 1067 7.1E-27 T 15-10-2018 IPR018541 FtsK gamma domain XDD1_1558 0bae800df5ebface5ccae9130a233394 1073 SMART SM00843 1005 1070 1.3E-40 T 15-10-2018 IPR018541 FtsK gamma domain XDD1_1558 0bae800df5ebface5ccae9130a233394 1073 SUPERFAMILY SSF52540 665 977 1.46E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1558 0bae800df5ebface5ccae9130a233394 1073 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 1.5E-47 T 15-10-2018 IPR025199 DNA translocase FtsK, 4TM region XDD1_1558 0bae800df5ebface5ccae9130a233394 1073 Gene3D G3DSA:1.10.10.10 1009 1072 1.7E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1558 0bae800df5ebface5ccae9130a233394 1073 Pfam PF01580 FtsK/SpoIIIE family 691 904 4.3E-75 T 15-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 XDD1_1558 0bae800df5ebface5ccae9130a233394 1073 Gene3D G3DSA:3.30.980.40 583 687 4.7E-34 T 15-10-2018 XDD1_1558 0bae800df5ebface5ccae9130a233394 1073 Gene3D G3DSA:3.40.50.300 688 990 2.1E-124 T 15-10-2018 XDD1_3225 c05d37c0c9ed7393ae5033850977bef3 81 Gene3D G3DSA:3.40.1620.10 1 41 1.4E-9 T 15-10-2018 XDD1_3225 c05d37c0c9ed7393ae5033850977bef3 81 SUPERFAMILY SSF143120 1 45 1.31E-9 T 15-10-2018 IPR036165 YefM-like superfamily XDD1_3225 c05d37c0c9ed7393ae5033850977bef3 81 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 44 3.2E-10 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM XDD1_3225 c05d37c0c9ed7393ae5033850977bef3 81 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 44 1.4E-6 T 15-10-2018 XDD1_0326 4a42cdee2c24d4aae2e79e37084b8a0d 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 9.0E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0326 4a42cdee2c24d4aae2e79e37084b8a0d 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0326 4a42cdee2c24d4aae2e79e37084b8a0d 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0326 4a42cdee2c24d4aae2e79e37084b8a0d 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0326 4a42cdee2c24d4aae2e79e37084b8a0d 283 Hamap MF_01233 HTH-type transcriptional regulator HdfR [hdfR]. 1 272 49.724 T 15-10-2018 IPR020890 Transcription regulator HTH, HdfR GO:0003677|GO:0003700|GO:0045892 XDD1_0326 4a42cdee2c24d4aae2e79e37084b8a0d 283 Gene3D G3DSA:3.40.190.290 89 279 1.4E-12 T 15-10-2018 XDD1_0326 4a42cdee2c24d4aae2e79e37084b8a0d 283 SUPERFAMILY SSF46785 2 83 1.13E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_0326 4a42cdee2c24d4aae2e79e37084b8a0d 283 SUPERFAMILY SSF53850 90 270 7.33E-21 T 15-10-2018 XDD1_0326 4a42cdee2c24d4aae2e79e37084b8a0d 283 Pfam PF03466 LysR substrate binding domain 89 268 1.2E-19 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_0326 4a42cdee2c24d4aae2e79e37084b8a0d 283 Gene3D G3DSA:1.10.10.10 1 84 4.6E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0371 e3ef0a4a54112263dce31c19a023ee49 238 Pfam PF00702 haloacid dehalogenase-like hydrolase 12 197 1.7E-13 T 15-10-2018 XDD1_0371 e3ef0a4a54112263dce31c19a023ee49 238 SUPERFAMILY SSF56784 11 238 1.93E-36 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_0371 e3ef0a4a54112263dce31c19a023ee49 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 127 200 5.5E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_0371 e3ef0a4a54112263dce31c19a023ee49 238 Gene3D G3DSA:3.40.50.1000 12 231 4.9E-57 T 15-10-2018 IPR023214 HAD superfamily XDD1_0371 e3ef0a4a54112263dce31c19a023ee49 238 Gene3D G3DSA:1.20.120.1600 24 110 4.9E-57 T 15-10-2018 XDD1_1098 1e8f36d2483c1077b57e252bf687b414 920 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 28 299 1.4E-72 T 15-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase XDD1_1098 1e8f36d2483c1077b57e252bf687b414 920 SUPERFAMILY SSF52540 445 841 6.42E-32 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1098 1e8f36d2483c1077b57e252bf687b414 920 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 17 914 0.0 T 15-10-2018 IPR022303 Conjugative transfer ATPase XDD1_1098 1e8f36d2483c1077b57e252bf687b414 920 Gene3D G3DSA:3.40.50.300 469 612 1.8E-7 T 15-10-2018 XDD1_1098 1e8f36d2483c1077b57e252bf687b414 920 Gene3D G3DSA:3.40.50.300 696 874 7.4E-18 T 15-10-2018 XDD1_0463 aeb4be54c16bcf1274e1d75cd6cd4f0a 388 Gene3D G3DSA:3.40.50.300 159 338 4.6E-55 T 15-10-2018 XDD1_0463 aeb4be54c16bcf1274e1d75cd6cd4f0a 388 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.1E-24 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_0463 aeb4be54c16bcf1274e1d75cd6cd4f0a 388 SUPERFAMILY SSF82051 2 157 1.96E-58 T 15-10-2018 IPR036726 GTP1/OBG domain superfamily XDD1_0463 aeb4be54c16bcf1274e1d75cd6cd4f0a 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.5E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_0463 aeb4be54c16bcf1274e1d75cd6cd4f0a 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.5E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_0463 aeb4be54c16bcf1274e1d75cd6cd4f0a 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.5E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_0463 aeb4be54c16bcf1274e1d75cd6cd4f0a 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.5E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_0463 aeb4be54c16bcf1274e1d75cd6cd4f0a 388 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.9E-149 T 15-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 XDD1_0463 aeb4be54c16bcf1274e1d75cd6cd4f0a 388 PIRSF PIRSF002401 1 377 7.9E-143 T 15-10-2018 IPR035101 GTP-binding protein, Obg-type XDD1_0463 aeb4be54c16bcf1274e1d75cd6cd4f0a 388 Gene3D G3DSA:2.70.210.12 1 158 8.3E-64 T 15-10-2018 IPR036726 GTP1/OBG domain superfamily XDD1_0463 aeb4be54c16bcf1274e1d75cd6cd4f0a 388 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.829 T 15-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 XDD1_0463 aeb4be54c16bcf1274e1d75cd6cd4f0a 388 Pfam PF01018 GTP1/OBG 4 157 3.8E-60 T 15-10-2018 IPR006169 GTP1/OBG domain XDD1_0463 aeb4be54c16bcf1274e1d75cd6cd4f0a 388 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 15-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 XDD1_0463 aeb4be54c16bcf1274e1d75cd6cd4f0a 388 SUPERFAMILY SSF52540 151 338 2.39E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1375 d2c5fff70d2e54d885e7996dfcd51ba9 295 Pfam PF13614 AAA domain 1 149 2.0E-19 T 15-10-2018 IPR025669 AAA domain XDD1_1375 d2c5fff70d2e54d885e7996dfcd51ba9 295 SUPERFAMILY SSF52540 1 275 3.09E-31 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1375 d2c5fff70d2e54d885e7996dfcd51ba9 295 Gene3D G3DSA:3.40.50.300 1 284 1.3E-34 T 15-10-2018 XDD1_0562 678c72039d0b28cc9f9cc2607af2fc15 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.3E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0562 678c72039d0b28cc9f9cc2607af2fc15 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.3E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0562 678c72039d0b28cc9f9cc2607af2fc15 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 4.3E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0562 678c72039d0b28cc9f9cc2607af2fc15 262 Gene3D G3DSA:3.40.50.720 1 257 1.6E-64 T 15-10-2018 XDD1_0562 678c72039d0b28cc9f9cc2607af2fc15 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 7.2E-34 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0562 678c72039d0b28cc9f9cc2607af2fc15 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 7.2E-34 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0562 678c72039d0b28cc9f9cc2607af2fc15 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 7.2E-34 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0562 678c72039d0b28cc9f9cc2607af2fc15 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 7.2E-34 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0562 678c72039d0b28cc9f9cc2607af2fc15 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.2E-34 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0562 678c72039d0b28cc9f9cc2607af2fc15 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 7.2E-34 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_0562 678c72039d0b28cc9f9cc2607af2fc15 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 246 4.9E-57 T 15-10-2018 XDD1_0562 678c72039d0b28cc9f9cc2607af2fc15 262 SUPERFAMILY SSF51735 5 249 5.72E-67 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2643 89a0757be10645a4c6a5fbe78b513819 324 Gene3D G3DSA:3.40.190.10 123 250 7.1E-52 T 15-10-2018 XDD1_2643 89a0757be10645a4c6a5fbe78b513819 324 SUPERFAMILY SSF53850 91 274 3.62E-5 T 15-10-2018 XDD1_2643 89a0757be10645a4c6a5fbe78b513819 324 PIRSF PIRSF017082 2 324 1.3E-73 T 15-10-2018 IPR005064 Bordetella uptake gene GO:0030288 XDD1_2643 89a0757be10645a4c6a5fbe78b513819 324 Gene3D G3DSA:3.40.190.150 29 314 7.1E-52 T 15-10-2018 XDD1_2643 89a0757be10645a4c6a5fbe78b513819 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 111 318 3.7E-17 T 15-10-2018 IPR005064 Bordetella uptake gene GO:0030288 XDD1_3445 6b5077263568a2e651b0aec24f41193f 343 PIRSF PIRSF018494 1 340 1.4E-141 T 15-10-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria XDD1_3445 6b5077263568a2e651b0aec24f41193f 343 Pfam PF04860 Phage portal protein 96 323 4.3E-9 T 15-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein XDD1_3445 6b5077263568a2e651b0aec24f41193f 343 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 55 323 2.0E-65 T 15-10-2018 IPR006430 Phage portal protein PBSX family XDD1_2109 2bf2fa5e2f07ec59a0b808b443f2446b 317 Gene3D G3DSA:3.30.1660.10 246 317 6.5E-28 T 15-10-2018 IPR025543 Dodecin-like XDD1_2109 2bf2fa5e2f07ec59a0b808b443f2446b 317 Gene3D G3DSA:3.30.1660.10 107 176 2.4E-19 T 15-10-2018 IPR025543 Dodecin-like XDD1_2109 2bf2fa5e2f07ec59a0b808b443f2446b 317 SUPERFAMILY SSF159871 4 94 7.32E-22 T 15-10-2018 IPR036275 YdgH-like superfamily XDD1_2109 2bf2fa5e2f07ec59a0b808b443f2446b 317 SUPERFAMILY SSF159871 109 180 7.19E-15 T 15-10-2018 IPR036275 YdgH-like superfamily XDD1_2109 2bf2fa5e2f07ec59a0b808b443f2446b 317 Gene3D G3DSA:3.30.1660.10 22 91 9.1E-23 T 15-10-2018 IPR025543 Dodecin-like XDD1_2109 2bf2fa5e2f07ec59a0b808b443f2446b 317 Pfam PF07338 Protein of unknown function (DUF1471) 263 317 1.4E-18 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 XDD1_2109 2bf2fa5e2f07ec59a0b808b443f2446b 317 Pfam PF07338 Protein of unknown function (DUF1471) 120 176 6.6E-16 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 XDD1_2109 2bf2fa5e2f07ec59a0b808b443f2446b 317 Pfam PF07338 Protein of unknown function (DUF1471) 36 91 5.4E-19 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 XDD1_2109 2bf2fa5e2f07ec59a0b808b443f2446b 317 SUPERFAMILY SSF159871 242 317 7.32E-17 T 15-10-2018 IPR036275 YdgH-like superfamily XDD1_2985 81c495575d658c89cc34cea5b3af0372 301 Pfam PF03466 LysR substrate binding domain 93 288 2.2E-13 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_2985 81c495575d658c89cc34cea5b3af0372 301 SUPERFAMILY SSF46785 4 111 1.36E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_2985 81c495575d658c89cc34cea5b3af0372 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 6.5E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2985 81c495575d658c89cc34cea5b3af0372 301 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 55.693 T 15-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria XDD1_2985 81c495575d658c89cc34cea5b3af0372 301 Gene3D G3DSA:3.40.190.290 90 294 4.7E-63 T 15-10-2018 XDD1_2985 81c495575d658c89cc34cea5b3af0372 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.7E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2985 81c495575d658c89cc34cea5b3af0372 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.7E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2985 81c495575d658c89cc34cea5b3af0372 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.7E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2985 81c495575d658c89cc34cea5b3af0372 301 SUPERFAMILY SSF53850 92 289 4.71E-20 T 15-10-2018 XDD1_2985 81c495575d658c89cc34cea5b3af0372 301 Gene3D G3DSA:1.10.10.10 2 83 7.5E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2985 81c495575d658c89cc34cea5b3af0372 301 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 4.7E-110 T 15-10-2018 IPR017685 HTH-type transcriptional regulator ArgP XDD1_3648 179cd0490226292938d0abcfd2ad265e 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.8E-33 T 15-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal XDD1_3648 179cd0490226292938d0abcfd2ad265e 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site XDD1_3648 179cd0490226292938d0abcfd2ad265e 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.377 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XDD1_3648 179cd0490226292938d0abcfd2ad265e 394 SUPERFAMILY SSF50465 298 393 3.17E-35 T 15-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal XDD1_3648 179cd0490226292938d0abcfd2ad265e 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 5.7E-239 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XDD1_3648 179cd0490226292938d0abcfd2ad265e 394 SUPERFAMILY SSF50447 205 301 6.68E-32 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XDD1_3648 179cd0490226292938d0abcfd2ad265e 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3648 179cd0490226292938d0abcfd2ad265e 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3648 179cd0490226292938d0abcfd2ad265e 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3648 179cd0490226292938d0abcfd2ad265e 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3648 179cd0490226292938d0abcfd2ad265e 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3648 179cd0490226292938d0abcfd2ad265e 394 Gene3D G3DSA:2.40.30.10 338 393 9.6E-29 T 15-10-2018 XDD1_3648 179cd0490226292938d0abcfd2ad265e 394 Gene3D G3DSA:2.40.30.10 206 334 2.8E-54 T 15-10-2018 XDD1_3648 179cd0490226292938d0abcfd2ad265e 394 SUPERFAMILY SSF52540 6 219 4.57E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3648 179cd0490226292938d0abcfd2ad265e 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 9.8E-18 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XDD1_3648 179cd0490226292938d0abcfd2ad265e 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 6.0E-59 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_3648 179cd0490226292938d0abcfd2ad265e 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 2.1E-14 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XDD1_3648 179cd0490226292938d0abcfd2ad265e 394 Gene3D G3DSA:3.40.50.300 1 203 2.1E-71 T 15-10-2018 XDD1_0084 0bbe8e1441df3cc71ca8e7fc35875667 414 SUPERFAMILY SSF56801 33 305 3.27E-14 T 15-10-2018 XDD1_0084 0bbe8e1441df3cc71ca8e7fc35875667 414 Gene3D G3DSA:3.40.50.12780 2 306 2.9E-48 T 15-10-2018 XDD1_3639 160588e911a3b7093070a819b080085a 426 SUPERFAMILY SSF88713 200 395 4.11E-31 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 XDD1_3639 160588e911a3b7093070a819b080085a 426 Pfam PF01522 Polysaccharide deacetylase 238 375 2.0E-18 T 15-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 XDD1_3639 160588e911a3b7093070a819b080085a 426 Gene3D G3DSA:3.20.20.370 176 415 1.9E-59 T 15-10-2018 XDD1_3779 1011166ae69fd0107d1203342a78dfab 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 7.5E-46 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_3779 1011166ae69fd0107d1203342a78dfab 339 SUPERFAMILY SSF161098 89 321 3.43E-21 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_0847 74d1784caac5b320b41059c3b109519c 392 SUPERFAMILY SSF53383 5 390 4.39E-94 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_0847 74d1784caac5b320b41059c3b109519c 392 Gene3D G3DSA:3.40.640.10 64 288 1.4E-127 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_0847 74d1784caac5b320b41059c3b109519c 392 Gene3D G3DSA:3.90.1150.10 31 383 1.4E-127 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_0847 74d1784caac5b320b41059c3b109519c 392 Pfam PF00155 Aminotransferase class I and II 34 384 2.0E-41 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XDD1_0847 74d1784caac5b320b41059c3b109519c 392 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 6 389 1.5E-123 T 15-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 XDD1_0368 582601d26c9bfc8ab24b580633750370 274 Pfam PF01678 Diaminopimelate epimerase 152 267 8.8E-31 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XDD1_0368 582601d26c9bfc8ab24b580633750370 274 Pfam PF01678 Diaminopimelate epimerase 3 122 6.2E-34 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XDD1_0368 582601d26c9bfc8ab24b580633750370 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 15-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XDD1_0368 582601d26c9bfc8ab24b580633750370 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 1.3E-100 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XDD1_0368 582601d26c9bfc8ab24b580633750370 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.013 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XDD1_0368 582601d26c9bfc8ab24b580633750370 274 Gene3D G3DSA:3.10.310.10 3 270 1.5E-105 T 15-10-2018 XDD1_0368 582601d26c9bfc8ab24b580633750370 274 Gene3D G3DSA:3.10.310.10 115 261 1.5E-105 T 15-10-2018 XDD1_0368 582601d26c9bfc8ab24b580633750370 274 SUPERFAMILY SSF54506 2 274 1.76E-53 T 15-10-2018 XDD1_0907 dd75a64d587580acb1231649700e2268 202 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 7.0E-81 T 15-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 XDD1_0907 dd75a64d587580acb1231649700e2268 202 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 15-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 XDD1_0907 dd75a64d587580acb1231649700e2268 202 SMART SM00493 81 166 1.3E-18 T 15-10-2018 IPR006171 TOPRIM domain XDD1_0907 dd75a64d587580acb1231649700e2268 202 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 103.019 T 15-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 XDD1_0907 dd75a64d587580acb1231649700e2268 202 Gene3D G3DSA:1.10.8.420 1 53 7.3E-20 T 15-10-2018 XDD1_0907 dd75a64d587580acb1231649700e2268 202 Pfam PF13662 Toprim domain 82 172 3.6E-22 T 15-10-2018 IPR006171 TOPRIM domain XDD1_0907 dd75a64d587580acb1231649700e2268 202 Pfam PF02132 RecR protein 41 77 5.6E-15 T 15-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger XDD1_0907 dd75a64d587580acb1231649700e2268 202 SUPERFAMILY SSF111304 2 199 2.35E-71 T 15-10-2018 IPR023627 Recombination protein RecR XDD1_0907 dd75a64d587580acb1231649700e2268 202 Gene3D G3DSA:3.40.1360.10 77 199 4.6E-40 T 15-10-2018 XDD1_3527 77a04f9630efb3e926b443fc648cb0b1 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 6.8E-9 T 15-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal XDD1_3527 77a04f9630efb3e926b443fc648cb0b1 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 2.2E-122 T 15-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 XDD1_3527 77a04f9630efb3e926b443fc648cb0b1 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_3527 77a04f9630efb3e926b443fc648cb0b1 241 SMART SM00382 28 231 3.4E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3527 77a04f9630efb3e926b443fc648cb0b1 241 SUPERFAMILY SSF52540 3 236 4.72E-67 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3527 77a04f9630efb3e926b443fc648cb0b1 241 Gene3D G3DSA:3.40.50.300 2 241 2.3E-73 T 15-10-2018 XDD1_3527 77a04f9630efb3e926b443fc648cb0b1 241 Pfam PF00005 ABC transporter 20 166 3.3E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_0165 8f4fe39f5f7c4eaa325da50b48012eee 360 Gene3D G3DSA:3.40.50.2000 72 175 8.4E-22 T 15-10-2018 XDD1_0165 8f4fe39f5f7c4eaa325da50b48012eee 360 SUPERFAMILY SSF53756 31 314 1.73E-32 T 15-10-2018 XDD1_0165 8f4fe39f5f7c4eaa325da50b48012eee 360 Pfam PF00534 Glycosyl transferases group 1 184 314 2.6E-18 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 XDD1_0165 8f4fe39f5f7c4eaa325da50b48012eee 360 Gene3D G3DSA:3.40.50.2000 176 314 8.4E-22 T 15-10-2018 XDD1_2038 46e3cfcfaf90d6e5945431f5d424f335 357 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 1 344 1.7E-59 T 15-10-2018 IPR017740 Type VI secretion system-associated, ImpA XDD1_2038 46e3cfcfaf90d6e5945431f5d424f335 357 Pfam PF06812 ImpA, N-terminal, type VI secretion system 7 130 1.1E-35 T 15-10-2018 IPR010657 ImpA, N-terminal XDD1_1650 f0975282c522f745bfe3c18f82dedb26 537 Pfam PF13289 SIR2-like domain 146 271 1.7E-21 T 15-10-2018 IPR039444 SIR2-like domain XDD1_1650 f0975282c522f745bfe3c18f82dedb26 537 PIRSF PIRSF014677 2 527 1.5E-102 T 15-10-2018 IPR011202 Uncharacterised conserved protein UCP014677 XDD1_1996 cec15cdea3b5e75bbb54880196157fd7 196 Pfam PF01195 Peptidyl-tRNA hydrolase 6 189 4.1E-53 T 15-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 XDD1_1996 cec15cdea3b5e75bbb54880196157fd7 196 SUPERFAMILY SSF53178 4 193 7.32E-70 T 15-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 XDD1_1996 cec15cdea3b5e75bbb54880196157fd7 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 190 2.2E-70 T 15-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 XDD1_1996 cec15cdea3b5e75bbb54880196157fd7 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 35.918 T 15-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 XDD1_1996 cec15cdea3b5e75bbb54880196157fd7 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 15-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 XDD1_1996 cec15cdea3b5e75bbb54880196157fd7 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 15-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 XDD1_1996 cec15cdea3b5e75bbb54880196157fd7 196 Gene3D G3DSA:3.40.50.1470 1 195 2.2E-73 T 15-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 XDD1_2683 615731b98833cefefc53ae9c4dfba15e 232 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 131 2.0E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2683 615731b98833cefefc53ae9c4dfba15e 232 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 2.0E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2683 615731b98833cefefc53ae9c4dfba15e 232 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 70 81 2.0E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2683 615731b98833cefefc53ae9c4dfba15e 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 1.0E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2683 615731b98833cefefc53ae9c4dfba15e 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.0E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2683 615731b98833cefefc53ae9c4dfba15e 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 1.0E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2683 615731b98833cefefc53ae9c4dfba15e 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 1.0E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2683 615731b98833cefefc53ae9c4dfba15e 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 1.0E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_2683 615731b98833cefefc53ae9c4dfba15e 232 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 229 1.1E-44 T 15-10-2018 XDD1_2683 615731b98833cefefc53ae9c4dfba15e 232 Gene3D G3DSA:3.40.50.720 1 232 9.0E-57 T 15-10-2018 XDD1_2683 615731b98833cefefc53ae9c4dfba15e 232 SUPERFAMILY SSF51735 5 231 2.88E-59 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1202 a556fcad3f25a9275ba035782a774969 519 Pfam PF04262 Glutamate-cysteine ligase 10 380 2.8E-174 T 15-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 XDD1_1202 a556fcad3f25a9275ba035782a774969 519 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 519 219.541 T 15-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 XDD1_1202 a556fcad3f25a9275ba035782a774969 519 Gene3D G3DSA:3.30.590.20 18 518 4.4E-191 T 15-10-2018 XDD1_1202 a556fcad3f25a9275ba035782a774969 519 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 514 4.6E-244 T 15-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 XDD1_1202 a556fcad3f25a9275ba035782a774969 519 SUPERFAMILY SSF55931 4 514 9.16E-203 T 15-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 XDD1_2719 32ea5bb0e05cafd520c3246e3a5df4af 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 444 518 3.8E-8 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2719 32ea5bb0e05cafd520c3246e3a5df4af 542 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 33 460 8.6E-102 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_2719 32ea5bb0e05cafd520c3246e3a5df4af 542 Gene3D G3DSA:3.30.300.30 430 534 5.2E-28 T 15-10-2018 XDD1_2719 32ea5bb0e05cafd520c3246e3a5df4af 542 Pfam PF00501 AMP-binding enzyme 12 436 3.9E-81 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2719 32ea5bb0e05cafd520c3246e3a5df4af 542 Gene3D G3DSA:3.40.50.12780 6 428 3.1E-98 T 15-10-2018 XDD1_2719 32ea5bb0e05cafd520c3246e3a5df4af 542 SUPERFAMILY SSF56801 6 530 6.28E-123 T 15-10-2018 XDD1_2719 32ea5bb0e05cafd520c3246e3a5df4af 542 ProSitePatterns PS00455 Putative AMP-binding domain signature. 169 180 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_3502 55c9208c40aa4254b60a51b7ff689fd3 217 Gene3D G3DSA:3.40.50.880 1 217 1.5E-94 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_3502 55c9208c40aa4254b60a51b7ff689fd3 217 SUPERFAMILY SSF52317 1 215 1.28E-60 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_3502 55c9208c40aa4254b60a51b7ff689fd3 217 PIRSF PIRSF006320 1 216 2.5E-101 T 15-10-2018 IPR026041 Glyoxalase ElbB XDD1_2647 49734649d46f633780d695296eecbd5b 303 SUPERFAMILY SSF103481 189 283 3.14E-11 T 15-10-2018 XDD1_2647 49734649d46f633780d695296eecbd5b 303 SUPERFAMILY SSF103481 36 139 6.8E-12 T 15-10-2018 XDD1_2647 49734649d46f633780d695296eecbd5b 303 Pfam PF00892 EamA-like transporter family 151 281 1.7E-18 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_2647 49734649d46f633780d695296eecbd5b 303 Pfam PF00892 EamA-like transporter family 4 136 1.3E-20 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_2331 83aa3c0e3189af5e5fa3260dc6fc27bd 334 Pfam PF10135 Rod binding protein 49 95 1.7E-16 T 15-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal XDD1_2331 83aa3c0e3189af5e5fa3260dc6fc27bd 334 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 11 316 1.6E-104 T 15-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 XDD1_2331 83aa3c0e3189af5e5fa3260dc6fc27bd 334 Gene3D G3DSA:2.10.70.40 207 259 7.9E-44 T 15-10-2018 XDD1_2331 83aa3c0e3189af5e5fa3260dc6fc27bd 334 PRINTS PR01002 Flagellar protein FlgJ signature 316 333 9.0E-35 T 15-10-2018 XDD1_2331 83aa3c0e3189af5e5fa3260dc6fc27bd 334 PRINTS PR01002 Flagellar protein FlgJ signature 5 25 9.0E-35 T 15-10-2018 XDD1_2331 83aa3c0e3189af5e5fa3260dc6fc27bd 334 PRINTS PR01002 Flagellar protein FlgJ signature 27 50 9.0E-35 T 15-10-2018 XDD1_2331 83aa3c0e3189af5e5fa3260dc6fc27bd 334 PRINTS PR01002 Flagellar protein FlgJ signature 52 72 9.0E-35 T 15-10-2018 XDD1_2331 83aa3c0e3189af5e5fa3260dc6fc27bd 334 PRINTS PR01002 Flagellar protein FlgJ signature 298 316 9.0E-35 T 15-10-2018 XDD1_2331 83aa3c0e3189af5e5fa3260dc6fc27bd 334 SMART SM00047 163 327 9.3E-42 T 15-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 XDD1_2331 83aa3c0e3189af5e5fa3260dc6fc27bd 334 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 182 316 8.2E-20 T 15-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 XDD1_2331 83aa3c0e3189af5e5fa3260dc6fc27bd 334 Gene3D G3DSA:1.10.530.10 173 313 7.9E-44 T 15-10-2018 XDD1_2822 4f830e2b9b0c7b68cf494f3784c8fbfd 193 Gene3D G3DSA:3.90.20.20 33 136 1.3E-33 T 15-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 XDD1_2822 4f830e2b9b0c7b68cf494f3784c8fbfd 193 SUPERFAMILY SSF51064 138 193 3.79E-18 T 15-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 XDD1_2822 4f830e2b9b0c7b68cf494f3784c8fbfd 193 Hamap MF_01151 Protein GrpE [grpE]. 10 193 21.441 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XDD1_2822 4f830e2b9b0c7b68cf494f3784c8fbfd 193 ProSitePatterns PS01071 grpE protein signature. 148 191 - T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XDD1_2822 4f830e2b9b0c7b68cf494f3784c8fbfd 193 Pfam PF01025 GrpE 27 193 2.8E-48 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XDD1_2822 4f830e2b9b0c7b68cf494f3784c8fbfd 193 SUPERFAMILY SSF58014 47 137 3.79E-26 T 15-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 XDD1_2822 4f830e2b9b0c7b68cf494f3784c8fbfd 193 PRINTS PR00773 GrpE protein signature 172 191 7.6E-27 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XDD1_2822 4f830e2b9b0c7b68cf494f3784c8fbfd 193 PRINTS PR00773 GrpE protein signature 145 160 7.6E-27 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XDD1_2822 4f830e2b9b0c7b68cf494f3784c8fbfd 193 PRINTS PR00773 GrpE protein signature 90 105 7.6E-27 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XDD1_2822 4f830e2b9b0c7b68cf494f3784c8fbfd 193 PRINTS PR00773 GrpE protein signature 62 78 7.6E-27 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XDD1_2822 4f830e2b9b0c7b68cf494f3784c8fbfd 193 Gene3D G3DSA:2.30.22.10 137 193 1.2E-25 T 15-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 XDD1_1278 0a76cc3063eb9983f1de0a94a8429578 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_1278 0a76cc3063eb9983f1de0a94a8429578 241 SUPERFAMILY SSF52540 1 235 2.18E-77 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1278 0a76cc3063eb9983f1de0a94a8429578 241 SMART SM00382 26 213 1.5E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1278 0a76cc3063eb9983f1de0a94a8429578 241 PIRSF PIRSF039085 1 241 1.3E-105 T 15-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 XDD1_1278 0a76cc3063eb9983f1de0a94a8429578 241 Gene3D G3DSA:3.40.50.300 1 240 7.1E-76 T 15-10-2018 XDD1_1278 0a76cc3063eb9983f1de0a94a8429578 241 Pfam PF00005 ABC transporter 17 165 2.0E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_0936 ebbb28ab99fa6d023d6492f648b008ef 294 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 13 172 8.5E-12 T 15-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 XDD1_0936 ebbb28ab99fa6d023d6492f648b008ef 294 Pfam PF05373 L-proline 3-hydroxylase, C-terminal 194 272 3.7E-6 T 15-10-2018 IPR008035 L-proline 3-hydroxylase, C-terminal GO:0016706|GO:0055114 XDD1_0936 ebbb28ab99fa6d023d6492f648b008ef 294 Gene3D G3DSA:2.60.120.330 2 199 2.2E-39 T 15-10-2018 IPR027443 Isopenicillin N synthase-like XDD1_0936 ebbb28ab99fa6d023d6492f648b008ef 294 SUPERFAMILY SSF51197 6 273 5.22E-39 T 15-10-2018 XDD1_0440 eddac57176615659cd6844ce772d6d37 185 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 23 181 1.9E-75 T 15-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ XDD1_0440 eddac57176615659cd6844ce772d6d37 185 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 183 2.2E-81 T 15-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ XDD1_2463 eedce1b939915599ea724c4a15c993c9 265 Gene3D G3DSA:3.40.1190.20 2 265 3.8E-96 T 15-10-2018 IPR029056 Ribokinase-like XDD1_2463 eedce1b939915599ea724c4a15c993c9 265 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 261 8.8E-97 T 15-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XDD1_2463 eedce1b939915599ea724c4a15c993c9 265 Pfam PF08543 Phosphomethylpyrimidine kinase 12 259 9.8E-90 T 15-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 XDD1_2463 eedce1b939915599ea724c4a15c993c9 265 SUPERFAMILY SSF53613 6 265 6.39E-75 T 15-10-2018 IPR029056 Ribokinase-like XDD1_2161 d2637ef97b9005595e8b1d2062cbfc01 367 SUPERFAMILY SSF51395 8 364 2.28E-118 T 15-10-2018 XDD1_2161 d2637ef97b9005595e8b1d2062cbfc01 367 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 342 4.5E-88 T 15-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 XDD1_2161 d2637ef97b9005595e8b1d2062cbfc01 367 Gene3D G3DSA:3.20.20.70 2 367 7.0E-139 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_2049 08d3782ecaa05e26f1e238382f32ee28 734 Gene3D G3DSA:3.55.50.10 96 186 6.2E-89 T 15-10-2018 XDD1_2049 08d3782ecaa05e26f1e238382f32ee28 734 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 533 2.4E-117 T 15-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein XDD1_2049 08d3782ecaa05e26f1e238382f32ee28 734 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 8 551 3.6E-153 T 15-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset XDD1_2049 08d3782ecaa05e26f1e238382f32ee28 734 Pfam PF05954 Phage late control gene D protein (GPD) 25 327 2.2E-74 T 15-10-2018 XDD1_2049 08d3782ecaa05e26f1e238382f32ee28 734 SUPERFAMILY SSF69349 470 663 1.18E-35 T 15-10-2018 XDD1_2049 08d3782ecaa05e26f1e238382f32ee28 734 Gene3D G3DSA:2.30.110.50 10 330 6.2E-89 T 15-10-2018 XDD1_2049 08d3782ecaa05e26f1e238382f32ee28 734 Gene3D G3DSA:3.30.1920.30 223 284 6.2E-89 T 15-10-2018 XDD1_2049 08d3782ecaa05e26f1e238382f32ee28 734 SUPERFAMILY SSF69279 10 181 1.19E-44 T 15-10-2018 XDD1_2049 08d3782ecaa05e26f1e238382f32ee28 734 SUPERFAMILY SSF69255 392 479 2.62E-30 T 15-10-2018 XDD1_2049 08d3782ecaa05e26f1e238382f32ee28 734 Gene3D G3DSA:2.40.50.230 383 485 1.1E-39 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XDD1_2049 08d3782ecaa05e26f1e238382f32ee28 734 SUPERFAMILY SSF69279 185 392 3.4E-34 T 15-10-2018 XDD1_0431 e9eae4879859d71da3f637520485b165 132 SUPERFAMILY SSF54995 1 103 1.44E-37 T 15-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0431 e9eae4879859d71da3f637520485b165 132 Pfam PF01250 Ribosomal protein S6 3 91 6.6E-28 T 15-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0431 e9eae4879859d71da3f637520485b165 132 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 8.4E-38 T 15-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0431 e9eae4879859d71da3f637520485b165 132 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 15-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 XDD1_0431 e9eae4879859d71da3f637520485b165 132 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.897 T 15-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 XDD1_0431 e9eae4879859d71da3f637520485b165 132 Gene3D G3DSA:3.30.70.60 1 92 3.0E-33 T 15-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 XDD1_3591 8cdd4b3f57c44a0d5c10e5b9abaf195b 250 SUPERFAMILY SSF54292 4 112 1.62E-27 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 XDD1_3591 8cdd4b3f57c44a0d5c10e5b9abaf195b 250 Gene3D G3DSA:3.10.20.30 3 112 1.4E-32 T 15-10-2018 IPR012675 Beta-grasp domain superfamily XDD1_3591 8cdd4b3f57c44a0d5c10e5b9abaf195b 250 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 117 4.2E-31 T 15-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_3591 8cdd4b3f57c44a0d5c10e5b9abaf195b 250 Pfam PF13183 4Fe-4S dicluster domain 152 225 1.1E-11 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XDD1_3591 8cdd4b3f57c44a0d5c10e5b9abaf195b 250 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 155 166 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XDD1_3591 8cdd4b3f57c44a0d5c10e5b9abaf195b 250 Gene3D G3DSA:1.10.1060.10 113 250 3.2E-51 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XDD1_3591 8cdd4b3f57c44a0d5c10e5b9abaf195b 250 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 235 7.8E-96 T 15-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 XDD1_3591 8cdd4b3f57c44a0d5c10e5b9abaf195b 250 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 XDD1_3591 8cdd4b3f57c44a0d5c10e5b9abaf195b 250 SUPERFAMILY SSF46548 113 238 2.09E-31 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XDD1_0651 55df3782a1c0b904751aec60758cbf82 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 9.8E-31 T 15-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 XDD1_0651 55df3782a1c0b904751aec60758cbf82 104 Gene3D G3DSA:1.10.3730.20 1 104 2.7E-32 T 15-10-2018 XDD1_0651 55df3782a1c0b904751aec60758cbf82 104 SUPERFAMILY SSF103481 5 103 6.15E-21 T 15-10-2018 XDD1_2698 8c967deb5b80f281351ff31cc766c697 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_2698 8c967deb5b80f281351ff31cc766c697 471 Gene3D G3DSA:1.10.10.350 368 470 3.0E-22 T 15-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 XDD1_2698 8c967deb5b80f281351ff31cc766c697 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 306 1.4E-120 T 15-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 XDD1_2698 8c967deb5b80f281351ff31cc766c697 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 460 9.4E-203 T 15-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 XDD1_2698 8c967deb5b80f281351ff31cc766c697 471 SUPERFAMILY SSF52374 4 299 2.36E-113 T 15-10-2018 XDD1_2698 8c967deb5b80f281351ff31cc766c697 471 SUPERFAMILY SSF48163 300 462 1.11E-43 T 15-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 XDD1_2698 8c967deb5b80f281351ff31cc766c697 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 3.9E-27 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XDD1_2698 8c967deb5b80f281351ff31cc766c697 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 190 3.9E-27 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XDD1_2698 8c967deb5b80f281351ff31cc766c697 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 3.9E-27 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XDD1_2698 8c967deb5b80f281351ff31cc766c697 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 204 3.9E-27 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XDD1_2698 8c967deb5b80f281351ff31cc766c697 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 3.9E-27 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XDD1_2698 8c967deb5b80f281351ff31cc766c697 471 Gene3D G3DSA:3.40.50.620 2 314 2.3E-137 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_2698 8c967deb5b80f281351ff31cc766c697 471 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 3 462 32.624 T 15-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 XDD1_2190 03ce74683b89d2fd51c270608f8fbc88 359 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 18 358 1.4E-135 T 15-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 XDD1_2190 03ce74683b89d2fd51c270608f8fbc88 359 Pfam PF03116 NQR2, RnfD, RnfE family 15 357 1.8E-105 T 15-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 XDD1_2190 03ce74683b89d2fd51c270608f8fbc88 359 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 13 359 27.651 T 15-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 XDD1_2096 dde4f1421959ed97fd62bb4b0d0a0281 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 330 4.4E-34 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 XDD1_2096 dde4f1421959ed97fd62bb4b0d0a0281 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 15-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XDD1_2096 dde4f1421959ed97fd62bb4b0d0a0281 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site XDD1_2096 dde4f1421959ed97fd62bb4b0d0a0281 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 299 1.4E-53 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 XDD1_2096 dde4f1421959ed97fd62bb4b0d0a0281 331 SUPERFAMILY SSF52283 2 137 1.34E-43 T 15-10-2018 XDD1_2096 dde4f1421959ed97fd62bb4b0d0a0281 331 Gene3D G3DSA:3.40.50.720 2 319 3.0E-137 T 15-10-2018 XDD1_2096 dde4f1421959ed97fd62bb4b0d0a0281 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site XDD1_2096 dde4f1421959ed97fd62bb4b0d0a0281 331 Gene3D G3DSA:3.40.50.720 104 299 3.0E-137 T 15-10-2018 XDD1_2096 dde4f1421959ed97fd62bb4b0d0a0281 331 SUPERFAMILY SSF51735 104 300 5.07E-54 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_3646 beccc62a1cb2ac56548bff85326aa316 181 Pfam PF02357 Transcription termination factor nusG 7 112 4.6E-28 T 15-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XDD1_3646 beccc62a1cb2ac56548bff85326aa316 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 15-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site XDD1_3646 beccc62a1cb2ac56548bff85326aa316 181 SMART SM00738 6 115 1.4E-48 T 15-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XDD1_3646 beccc62a1cb2ac56548bff85326aa316 181 SUPERFAMILY SSF82679 6 116 3.53E-40 T 15-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XDD1_3646 beccc62a1cb2ac56548bff85326aa316 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.955 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XDD1_3646 beccc62a1cb2ac56548bff85326aa316 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 7.7E-72 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XDD1_3646 beccc62a1cb2ac56548bff85326aa316 181 Gene3D G3DSA:2.30.30.30 124 181 3.3E-27 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 XDD1_3646 beccc62a1cb2ac56548bff85326aa316 181 Pfam PF00467 KOW motif 130 162 5.4E-8 T 15-10-2018 IPR005824 KOW XDD1_3646 beccc62a1cb2ac56548bff85326aa316 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XDD1_3646 beccc62a1cb2ac56548bff85326aa316 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XDD1_3646 beccc62a1cb2ac56548bff85326aa316 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XDD1_3646 beccc62a1cb2ac56548bff85326aa316 181 SUPERFAMILY SSF50104 125 180 6.02E-20 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily XDD1_3646 beccc62a1cb2ac56548bff85326aa316 181 Gene3D G3DSA:3.30.70.940 1 123 9.7E-49 T 15-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XDD1_3646 beccc62a1cb2ac56548bff85326aa316 181 SMART SM00739 127 154 1.0E-6 T 15-10-2018 IPR005824 KOW XDD1_2367 ac19c391ce288542df2eadf86d599653 218 Pfam PF04344 Chemotaxis phosphatase, CheZ 17 218 4.3E-76 T 15-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 XDD1_2367 ac19c391ce288542df2eadf86d599653 218 Gene3D G3DSA:1.10.287.500 36 171 2.1E-50 T 15-10-2018 XDD1_2367 ac19c391ce288542df2eadf86d599653 218 PIRSF PIRSF002884 3 218 7.5E-83 T 15-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 XDD1_2367 ac19c391ce288542df2eadf86d599653 218 SUPERFAMILY SSF75708 14 217 6.28E-63 T 15-10-2018 XDD1_2367 ac19c391ce288542df2eadf86d599653 218 Gene3D G3DSA:1.20.5.590 1 35 4.1E-9 T 15-10-2018 XDD1_0539 014d867f0721431bad9d53553ef535c6 84 Gene3D G3DSA:1.10.1220.50 1 83 2.3E-35 T 15-10-2018 XDD1_0539 014d867f0721431bad9d53553ef535c6 84 Pfam PF09386 Antitoxin ParD 1 78 8.4E-45 T 15-10-2018 IPR022789 Antitoxin ParD XDD1_2820 8fc460c28babb3098dd2ac789ff67997 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 15-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site XDD1_2820 8fc460c28babb3098dd2ac789ff67997 127 Pfam PF01228 Glycine radical 12 108 8.4E-23 T 15-10-2018 IPR001150 Glycine radical domain GO:0003824 XDD1_2820 8fc460c28babb3098dd2ac789ff67997 127 PIRSF PIRSF000378 2 127 6.1E-55 T 15-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA XDD1_2820 8fc460c28babb3098dd2ac789ff67997 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 41.441 T 15-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA XDD1_2820 8fc460c28babb3098dd2ac789ff67997 127 Gene3D G3DSA:3.20.70.20 12 127 2.7E-26 T 15-10-2018 XDD1_2820 8fc460c28babb3098dd2ac789ff67997 127 SUPERFAMILY SSF51998 61 126 1.46E-24 T 15-10-2018 XDD1_2820 8fc460c28babb3098dd2ac789ff67997 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 1.3E-70 T 15-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA XDD1_0401 b6ec24c8c6ce377cd6059bec39b4a3ab 181 Gene3D G3DSA:3.30.420.10 1 181 3.8E-72 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_0401 b6ec24c8c6ce377cd6059bec39b4a3ab 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.842 T 15-10-2018 IPR022894 Oligoribonuclease GO:0000175 XDD1_0401 b6ec24c8c6ce377cd6059bec39b4a3ab 181 Pfam PF00929 Exonuclease 9 170 4.4E-38 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XDD1_0401 b6ec24c8c6ce377cd6059bec39b4a3ab 181 SMART SM00479 7 180 1.6E-19 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XDD1_0401 b6ec24c8c6ce377cd6059bec39b4a3ab 181 SUPERFAMILY SSF53098 3 179 2.88E-48 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0290 fd4842957e35b8a4f9fd92af47da68f3 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 1.5E-58 T 15-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 XDD1_0290 fd4842957e35b8a4f9fd92af47da68f3 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 15-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0290 fd4842957e35b8a4f9fd92af47da68f3 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 8.2E-55 T 15-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 XDD1_0290 fd4842957e35b8a4f9fd92af47da68f3 123 SMART SM01374 1 123 1.7E-85 T 15-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 XDD1_0290 fd4842957e35b8a4f9fd92af47da68f3 123 SUPERFAMILY SSF50193 2 122 3.14E-51 T 15-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 XDD1_0290 fd4842957e35b8a4f9fd92af47da68f3 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.609 T 15-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 XDD1_0290 fd4842957e35b8a4f9fd92af47da68f3 123 Gene3D G3DSA:2.40.150.20 1 123 7.7E-57 T 15-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 XDD1_0340 06cadca8aa093b13b741652b5ab98d12 677 Gene3D G3DSA:3.40.50.300 274 632 1.0E-135 T 15-10-2018 XDD1_0340 06cadca8aa093b13b741652b5ab98d12 677 SUPERFAMILY SSF52540 2 639 1.04E-163 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0340 06cadca8aa093b13b741652b5ab98d12 677 Gene3D G3DSA:1.10.486.10 377 544 1.0E-135 T 15-10-2018 XDD1_0340 06cadca8aa093b13b741652b5ab98d12 677 Gene3D G3DSA:3.40.50.300 4 266 4.9E-99 T 15-10-2018 XDD1_0340 06cadca8aa093b13b741652b5ab98d12 677 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 40.922 T 15-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 XDD1_0340 06cadca8aa093b13b741652b5ab98d12 677 Gene3D G3DSA:1.10.10.160 108 181 4.9E-99 T 15-10-2018 IPR013986 DExx box DNA helicase domain superfamily XDD1_0340 06cadca8aa093b13b741652b5ab98d12 677 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 3.6E-72 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 XDD1_0340 06cadca8aa093b13b741652b5ab98d12 677 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 665 0.0 T 15-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 XDD1_0340 06cadca8aa093b13b741652b5ab98d12 677 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 1.2E-74 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 XDD1_1177 acff101e66fb74dbffb9dcbb476d7c0b 342 Gene3D G3DSA:3.10.520.20 24 342 6.6E-113 T 15-10-2018 XDD1_1177 acff101e66fb74dbffb9dcbb476d7c0b 342 SUPERFAMILY SSF143631 30 339 1.18E-100 T 15-10-2018 IPR003374 ApbE-like superfamily XDD1_1177 acff101e66fb74dbffb9dcbb476d7c0b 342 Pfam PF02424 ApbE family 35 316 2.7E-83 T 15-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 XDD1_1177 acff101e66fb74dbffb9dcbb476d7c0b 342 PIRSF PIRSF006268 2 341 4.2E-90 T 15-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 XDD1_3051 3f931ea4bf1ad3bff6d8e3a2e64c1594 349 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_3051 3f931ea4bf1ad3bff6d8e3a2e64c1594 349 SMART SM00382 31 214 1.6E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3051 3f931ea4bf1ad3bff6d8e3a2e64c1594 349 Gene3D G3DSA:2.40.50.140 281 337 2.1E-10 T 15-10-2018 XDD1_3051 3f931ea4bf1ad3bff6d8e3a2e64c1594 349 Gene3D G3DSA:3.40.50.300 6 224 2.2E-68 T 15-10-2018 XDD1_3051 3f931ea4bf1ad3bff6d8e3a2e64c1594 349 Gene3D G3DSA:2.40.50.940 225 342 2.1E-10 T 15-10-2018 XDD1_3051 3f931ea4bf1ad3bff6d8e3a2e64c1594 349 SUPERFAMILY SSF50331 240 346 2.78E-12 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal XDD1_3051 3f931ea4bf1ad3bff6d8e3a2e64c1594 349 Pfam PF00005 ABC transporter 23 164 4.8E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_3051 3f931ea4bf1ad3bff6d8e3a2e64c1594 349 SUPERFAMILY SSF52540 7 244 1.08E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3051 3f931ea4bf1ad3bff6d8e3a2e64c1594 349 Pfam PF08402 TOBE domain 274 343 5.5E-9 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 XDD1_2817 51f3c59f241b1538775cd033fd055ddd 255 SUPERFAMILY SSF53335 12 185 1.96E-26 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_2817 51f3c59f241b1538775cd033fd055ddd 255 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 12 255 53.049 T 15-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 XDD1_2817 51f3c59f241b1538775cd033fd055ddd 255 Pfam PF05175 Methyltransferase small domain 45 165 6.2E-11 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 XDD1_2817 51f3c59f241b1538775cd033fd055ddd 255 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 129 135 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XDD1_2817 51f3c59f241b1538775cd033fd055ddd 255 Gene3D G3DSA:3.40.50.150 11 251 2.4E-50 T 15-10-2018 XDD1_0487 36d5c4dbcbbbe38010bf5055e54552fe 239 Pfam PF04397 LytTr DNA-binding domain 143 236 1.0E-23 T 15-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 XDD1_0487 36d5c4dbcbbbe38010bf5055e54552fe 239 SMART SM00448 1 111 2.1E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_0487 36d5c4dbcbbbe38010bf5055e54552fe 239 SMART SM00850 142 237 4.5E-26 T 15-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 XDD1_0487 36d5c4dbcbbbe38010bf5055e54552fe 239 Pfam PF00072 Response regulator receiver domain 3 111 3.5E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_0487 36d5c4dbcbbbe38010bf5055e54552fe 239 Gene3D G3DSA:2.40.50.1020 125 238 1.1E-11 T 15-10-2018 XDD1_0487 36d5c4dbcbbbe38010bf5055e54552fe 239 Gene3D G3DSA:3.40.50.2300 1 124 4.0E-29 T 15-10-2018 XDD1_0487 36d5c4dbcbbbe38010bf5055e54552fe 239 SUPERFAMILY SSF52172 1 122 6.4E-32 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_1267 f63b239218aa7737344fc9ebdbb325b2 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 157 170 1.3E-16 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 XDD1_1267 f63b239218aa7737344fc9ebdbb325b2 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 71 82 1.3E-16 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 XDD1_1267 f63b239218aa7737344fc9ebdbb325b2 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 130 147 1.3E-16 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 XDD1_1267 f63b239218aa7737344fc9ebdbb325b2 402 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 291 382 1.6E-24 T 15-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XDD1_1267 f63b239218aa7737344fc9ebdbb325b2 402 Gene3D G3DSA:2.60.410.10 291 382 3.7E-28 T 15-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XDD1_1267 f63b239218aa7737344fc9ebdbb325b2 402 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 38 271 1.1E-97 T 15-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 XDD1_1267 f63b239218aa7737344fc9ebdbb325b2 402 SUPERFAMILY SSF56601 15 291 3.72E-77 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XDD1_1267 f63b239218aa7737344fc9ebdbb325b2 402 SUPERFAMILY SSF69189 291 384 1.8E-25 T 15-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XDD1_1267 f63b239218aa7737344fc9ebdbb325b2 402 Gene3D G3DSA:3.40.710.10 30 290 1.2E-90 T 15-10-2018 XDD1_1267 f63b239218aa7737344fc9ebdbb325b2 402 SMART SM00936 291 382 9.8E-34 T 15-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XDD1_3610 f291a6239e8edbfbfd7ed4bfe29a612e 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 15-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 XDD1_3610 f291a6239e8edbfbfd7ed4bfe29a612e 90 Gene3D G3DSA:4.10.520.10 1 90 1.2E-37 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XDD1_3610 f291a6239e8edbfbfd7ed4bfe29a612e 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.3E-33 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_3610 f291a6239e8edbfbfd7ed4bfe29a612e 90 SUPERFAMILY SSF47729 1 90 3.53E-33 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XDD1_3610 f291a6239e8edbfbfd7ed4bfe29a612e 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.8E-20 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_3610 f291a6239e8edbfbfd7ed4bfe29a612e 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.8E-20 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_3610 f291a6239e8edbfbfd7ed4bfe29a612e 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.8E-20 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_3610 f291a6239e8edbfbfd7ed4bfe29a612e 90 SMART SM00411 1 90 3.0E-44 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_0149 872e8313a1d00e11ba6947b45709430d 302 Pfam PF04748 Divergent polysaccharide deacetylase 26 234 5.5E-74 T 15-10-2018 IPR006837 Divergent polysaccharide deacetylase XDD1_0149 872e8313a1d00e11ba6947b45709430d 302 SUPERFAMILY SSF88713 23 236 2.05E-69 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 XDD1_0149 872e8313a1d00e11ba6947b45709430d 302 Gene3D G3DSA:3.20.20.370 19 236 2.7E-73 T 15-10-2018 XDD1_0112 c005eefff49e76dc49f51aa6ad52884e 73 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 54 8.4E-14 T 15-10-2018 XDD1_0112 c005eefff49e76dc49f51aa6ad52884e 73 SUPERFAMILY SSF143120 1 70 4.27E-15 T 15-10-2018 IPR036165 YefM-like superfamily XDD1_0112 c005eefff49e76dc49f51aa6ad52884e 73 Gene3D G3DSA:3.40.1620.10 1 51 5.7E-24 T 15-10-2018 XDD1_0112 c005eefff49e76dc49f51aa6ad52884e 73 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 53 9.6E-14 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM XDD1_0540 f6a3e194ca9bd9d0ff95558f90202196 105 Gene3D G3DSA:3.30.2310.20 1 96 6.3E-20 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XDD1_0540 f6a3e194ca9bd9d0ff95558f90202196 105 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 91 2.7E-13 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XDD1_0879 22b2678f172842bc43d94a41e695e1a2 94 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 6.7E-20 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_0879 22b2678f172842bc43d94a41e695e1a2 94 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 6.7E-20 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_0879 22b2678f172842bc43d94a41e695e1a2 94 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 6.7E-20 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_0879 22b2678f172842bc43d94a41e695e1a2 94 Gene3D G3DSA:4.10.520.10 4 93 1.4E-35 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XDD1_0879 22b2678f172842bc43d94a41e695e1a2 94 SMART SM00411 4 93 1.7E-43 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_0879 22b2678f172842bc43d94a41e695e1a2 94 Pfam PF00216 Bacterial DNA-binding protein 4 93 9.2E-33 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_0879 22b2678f172842bc43d94a41e695e1a2 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 15-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 XDD1_0879 22b2678f172842bc43d94a41e695e1a2 94 SUPERFAMILY SSF47729 4 93 2.06E-32 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XDD1_0631 fbd0cbc4bd56f14e82a98847712d5f09 307 SUPERFAMILY SSF51621 8 252 9.73E-33 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XDD1_0631 fbd0cbc4bd56f14e82a98847712d5f09 307 Pfam PF15617 C-C_Bond_Lyase of the TIM-Barrel fold 6 302 4.3E-106 T 15-10-2018 IPR039480 C-C bond lyase-like XDD1_0631 fbd0cbc4bd56f14e82a98847712d5f09 307 PIRSF PIRSF015582 5 307 3.3E-55 T 15-10-2018 IPR011206 Citrate lyase beta subunit-like XDD1_0631 fbd0cbc4bd56f14e82a98847712d5f09 307 Gene3D G3DSA:3.20.20.60 6 302 3.0E-21 T 15-10-2018 XDD1_1649 31ceb65bd04c66199c25d0233a09459f 92 SUPERFAMILY SSF47413 7 78 1.05E-31 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_1649 31ceb65bd04c66199c25d0233a09459f 92 Gene3D G3DSA:1.10.260.40 7 77 6.0E-34 T 15-10-2018 XDD1_1649 31ceb65bd04c66199c25d0233a09459f 92 Pfam PF13693 Winged helix-turn-helix DNA-binding 13 86 2.7E-38 T 15-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain XDD1_3856 0ac7270fdb01f19b2e6792fc39438159 349 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 2.0E-125 T 15-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 XDD1_3856 0ac7270fdb01f19b2e6792fc39438159 349 Pfam PF12849 PBP superfamily domain 26 307 3.5E-59 T 15-10-2018 IPR024370 PBP domain XDD1_3856 0ac7270fdb01f19b2e6792fc39438159 349 Gene3D G3DSA:3.40.190.10 29 326 3.5E-126 T 15-10-2018 XDD1_3856 0ac7270fdb01f19b2e6792fc39438159 349 PIRSF PIRSF002756 2 338 5.9E-104 T 15-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 XDD1_3856 0ac7270fdb01f19b2e6792fc39438159 349 SUPERFAMILY SSF53850 28 338 1.39E-95 T 15-10-2018 XDD1_3856 0ac7270fdb01f19b2e6792fc39438159 349 Gene3D G3DSA:3.40.190.10 103 278 3.5E-126 T 15-10-2018 XDD1_2086 9b18793012bf4a8b8e0fc142bf7055fb 89 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 6.1E-25 T 15-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 XDD1_2086 9b18793012bf4a8b8e0fc142bf7055fb 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 18.806 T 15-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 XDD1_2086 9b18793012bf4a8b8e0fc142bf7055fb 89 Gene3D G3DSA:3.30.1070.10 31 87 6.8E-28 T 15-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 XDD1_2086 9b18793012bf4a8b8e0fc142bf7055fb 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 1.7E-33 T 15-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 XDD1_2086 9b18793012bf4a8b8e0fc142bf7055fb 89 SUPERFAMILY SSF55229 32 84 1.29E-17 T 15-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 XDD1_3893 4c1c576513eca407cccc3322b4dc7afc 107 SUPERFAMILY SSF52821 1 102 1.14E-27 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily XDD1_3893 4c1c576513eca407cccc3322b4dc7afc 107 SMART SM00450 7 102 2.1E-20 T 15-10-2018 IPR001763 Rhodanese-like domain XDD1_3893 4c1c576513eca407cccc3322b4dc7afc 107 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 31.966 T 15-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 XDD1_3893 4c1c576513eca407cccc3322b4dc7afc 107 Pfam PF00581 Rhodanese-like domain 9 98 4.9E-14 T 15-10-2018 IPR001763 Rhodanese-like domain XDD1_3893 4c1c576513eca407cccc3322b4dc7afc 107 Gene3D G3DSA:3.40.250.10 1 106 5.6E-27 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily XDD1_2922 32590bf05a4399b4b729ea0738ef0595 197 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 92 191 2.4E-38 T 15-10-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 XDD1_2922 32590bf05a4399b4b729ea0738ef0595 197 Gene3D G3DSA:1.10.260.40 7 75 9.0E-24 T 15-10-2018 XDD1_2922 32590bf05a4399b4b729ea0738ef0595 197 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 10 73 6.6E-28 T 15-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 XDD1_2922 32590bf05a4399b4b729ea0738ef0595 197 Gene3D G3DSA:2.10.109.10 84 197 1.0E-33 T 15-10-2018 XDD1_2044 d270be4e2a564a400e265e9ef51a0d07 130 Pfam PF13665 Domain of unknown function (DUF4150) 9 115 1.1E-36 T 15-10-2018 IPR025425 Domain of unknown function DUF4150 XDD1_1162 1fa83dd477333678d986bef92d24eeac 294 SMART SM00849 42 227 8.9E-17 T 15-10-2018 IPR001279 Metallo-beta-lactamase XDD1_1162 1fa83dd477333678d986bef92d24eeac 294 Pfam PF00753 Metallo-beta-lactamase superfamily 42 227 2.3E-7 T 15-10-2018 IPR001279 Metallo-beta-lactamase XDD1_1162 1fa83dd477333678d986bef92d24eeac 294 SUPERFAMILY SSF56281 28 251 5.37E-40 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XDD1_1162 1fa83dd477333678d986bef92d24eeac 294 Gene3D G3DSA:3.60.15.10 29 262 2.3E-28 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XDD1_0587 6e3eb4868659083bd89eec7266233e94 153 Gene3D G3DSA:1.10.10.10 2 145 4.9E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0587 6e3eb4868659083bd89eec7266233e94 153 SUPERFAMILY SSF46785 9 143 2.05E-25 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_0587 6e3eb4868659083bd89eec7266233e94 153 Pfam PF01047 MarR family 36 93 1.9E-8 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_0587 6e3eb4868659083bd89eec7266233e94 153 SMART SM00347 29 130 1.5E-14 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_2040 5f9e665a06b601c411168ec2ceafb1fe 407 SUPERFAMILY SSF103088 279 395 6.28E-27 T 15-10-2018 IPR036737 OmpA-like domain superfamily XDD1_2040 5f9e665a06b601c411168ec2ceafb1fe 407 Gene3D G3DSA:1.25.40.590 17 176 1.1E-57 T 15-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily XDD1_2040 5f9e665a06b601c411168ec2ceafb1fe 407 Gene3D G3DSA:3.30.1330.60 254 398 4.0E-40 T 15-10-2018 IPR036737 OmpA-like domain superfamily XDD1_2040 5f9e665a06b601c411168ec2ceafb1fe 407 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 260 394 2.5E-46 T 15-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain XDD1_2040 5f9e665a06b601c411168ec2ceafb1fe 407 Pfam PF09850 Type VI secretion system protein DotU 21 223 3.9E-68 T 15-10-2018 IPR017732 Type IV / VI secretion system, DotU XDD1_2040 5f9e665a06b601c411168ec2ceafb1fe 407 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 20 228 1.2E-68 T 15-10-2018 IPR017732 Type IV / VI secretion system, DotU XDD1_2040 5f9e665a06b601c411168ec2ceafb1fe 407 Pfam PF00691 OmpA family 292 389 3.5E-15 T 15-10-2018 IPR006665 OmpA-like domain XDD1_2592 19831421b5865c39fd87f158bbe84b72 181 PIRSF PIRSF000216 12 181 8.2E-52 T 15-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2592 19831421b5865c39fd87f158bbe84b72 181 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 38 180 5.8E-50 T 15-10-2018 XDD1_2592 19831421b5865c39fd87f158bbe84b72 181 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 37 180 5.6E-52 T 15-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2592 19831421b5865c39fd87f158bbe84b72 181 Gene3D G3DSA:1.10.10.1590 28 97 2.8E-17 T 15-10-2018 XDD1_2592 19831421b5865c39fd87f158bbe84b72 181 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 138 156 - T 15-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2592 19831421b5865c39fd87f158bbe84b72 181 Gene3D G3DSA:3.40.30.10 98 180 2.2E-23 T 15-10-2018 XDD1_2592 19831421b5865c39fd87f158bbe84b72 181 SUPERFAMILY SSF52833 31 180 3.47E-48 T 15-10-2018 IPR036249 Thioredoxin-like superfamily XDD1_0080 baefd2faeca924672cae89516892be60 290 Gene3D G3DSA:3.55.30.10 1 176 4.7E-67 T 15-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 XDD1_0080 baefd2faeca924672cae89516892be60 290 Pfam PF01430 Hsp33 protein 5 273 3.1E-87 T 15-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 XDD1_0080 baefd2faeca924672cae89516892be60 290 Gene3D G3DSA:3.90.1280.10 227 285 5.3E-21 T 15-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 XDD1_0080 baefd2faeca924672cae89516892be60 290 PIRSF PIRSF005261 1 286 7.0E-72 T 15-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 XDD1_0080 baefd2faeca924672cae89516892be60 290 SUPERFAMILY SSF118352 226 282 6.8E-18 T 15-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 XDD1_0080 baefd2faeca924672cae89516892be60 290 SUPERFAMILY SSF64397 4 233 1.15E-77 T 15-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 XDD1_0080 baefd2faeca924672cae89516892be60 290 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 285 32.809 T 15-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 XDD1_0080 baefd2faeca924672cae89516892be60 290 Gene3D G3DSA:1.10.287.480 178 226 5.3E-20 T 15-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily XDD1_0410 fc35dbd6564c4a289a37964b2ab94f72 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.8E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0410 fc35dbd6564c4a289a37964b2ab94f72 310 SUPERFAMILY SSF46785 3 110 7.17E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_0410 fc35dbd6564c4a289a37964b2ab94f72 310 Pfam PF03466 LysR substrate binding domain 88 289 4.8E-38 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_0410 fc35dbd6564c4a289a37964b2ab94f72 310 Gene3D G3DSA:3.40.190.290 90 292 4.8E-60 T 15-10-2018 XDD1_0410 fc35dbd6564c4a289a37964b2ab94f72 310 SUPERFAMILY SSF53850 89 294 1.09E-40 T 15-10-2018 XDD1_0410 fc35dbd6564c4a289a37964b2ab94f72 310 Gene3D G3DSA:1.10.10.10 4 89 2.0E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1342 0d44636d5c61870052c9e5df4478f4d0 935 SUPERFAMILY SSF52518 577 793 3.43E-51 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_1342 0d44636d5c61870052c9e5df4478f4d0 935 Pfam PF02779 Transketolase, pyrimidine binding domain 593 787 7.9E-66 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XDD1_1342 0d44636d5c61870052c9e5df4478f4d0 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 15-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 XDD1_1342 0d44636d5c61870052c9e5df4478f4d0 935 Gene3D G3DSA:3.40.50.11610 723 929 8.0E-174 T 15-10-2018 XDD1_1342 0d44636d5c61870052c9e5df4478f4d0 935 PIRSF PIRSF000157 1 934 0.0 T 15-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 XDD1_1342 0d44636d5c61870052c9e5df4478f4d0 935 Gene3D G3DSA:3.40.50.970 167 533 1.1E-145 T 15-10-2018 XDD1_1342 0d44636d5c61870052c9e5df4478f4d0 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 2.2E-17 T 15-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 XDD1_1342 0d44636d5c61870052c9e5df4478f4d0 935 SUPERFAMILY SSF52518 121 548 1.26E-87 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_1342 0d44636d5c61870052c9e5df4478f4d0 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 790 932 1.9E-54 T 15-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 XDD1_1342 0d44636d5c61870052c9e5df4478f4d0 935 Gene3D G3DSA:1.10.287.1150 84 166 2.8E-29 T 15-10-2018 XDD1_1342 0d44636d5c61870052c9e5df4478f4d0 935 Pfam PF00676 Dehydrogenase E1 component 220 514 2.4E-49 T 15-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 XDD1_1342 0d44636d5c61870052c9e5df4478f4d0 935 Gene3D G3DSA:3.40.50.12470 556 802 8.0E-174 T 15-10-2018 XDD1_1342 0d44636d5c61870052c9e5df4478f4d0 935 SMART SM00861 593 786 4.2E-61 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XDD1_1621 ddb10861a57400c78e4238a56228c901 342 Gene3D G3DSA:3.20.20.70 24 147 2.6E-15 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_1621 ddb10861a57400c78e4238a56228c901 342 Gene3D G3DSA:3.20.20.70 148 340 1.1E-15 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_1621 ddb10861a57400c78e4238a56228c901 342 Pfam PF13186 Iron-sulfur cluster-binding domain 266 329 1.9E-11 T 15-10-2018 IPR023885 4Fe4S-binding SPASM domain XDD1_1621 ddb10861a57400c78e4238a56228c901 342 Pfam PF04055 Radical SAM superfamily 34 170 1.7E-12 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XDD1_1621 ddb10861a57400c78e4238a56228c901 342 SUPERFAMILY SSF102114 25 335 1.7E-37 T 15-10-2018 XDD1_3614 ac3f06e56e039562d52e12a81a76215b 255 SUPERFAMILY SSF55811 78 243 1.82E-37 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XDD1_3614 ac3f06e56e039562d52e12a81a76215b 255 Gene3D G3DSA:3.90.79.10 126 254 1.0E-38 T 15-10-2018 XDD1_3614 ac3f06e56e039562d52e12a81a76215b 255 Pfam PF00293 NUDIX domain 132 235 3.7E-15 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XDD1_3614 ac3f06e56e039562d52e12a81a76215b 255 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 255 40.503 T 15-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 XDD1_3614 ac3f06e56e039562d52e12a81a76215b 255 SUPERFAMILY SSF55811 2 95 6.89E-23 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XDD1_3614 ac3f06e56e039562d52e12a81a76215b 255 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 3.9E-6 T 15-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 XDD1_3614 ac3f06e56e039562d52e12a81a76215b 255 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XDD1_3614 ac3f06e56e039562d52e12a81a76215b 255 Gene3D G3DSA:3.90.79.20 1 125 3.0E-38 T 15-10-2018 XDD1_0034 4c3c9408d1179a872c1c125129af90ec 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 4.4E-19 T 15-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XDD1_0034 4c3c9408d1179a872c1c125129af90ec 460 Gene3D G3DSA:1.10.1140.10 345 460 3.9E-60 T 15-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XDD1_0034 4c3c9408d1179a872c1c125129af90ec 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 1.9E-63 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XDD1_0034 4c3c9408d1179a872c1c125129af90ec 460 Gene3D G3DSA:3.40.50.300 76 344 1.7E-113 T 15-10-2018 XDD1_0034 4c3c9408d1179a872c1c125129af90ec 460 SUPERFAMILY SSF47917 345 459 4.45E-55 T 15-10-2018 XDD1_0034 4c3c9408d1179a872c1c125129af90ec 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 15-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XDD1_0034 4c3c9408d1179a872c1c125129af90ec 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 56.997 T 15-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 XDD1_0034 4c3c9408d1179a872c1c125129af90ec 460 SUPERFAMILY SSF50615 1 75 8.11E-25 T 15-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XDD1_0034 4c3c9408d1179a872c1c125129af90ec 460 Gene3D G3DSA:2.40.10.170 2 75 2.8E-30 T 15-10-2018 XDD1_0034 4c3c9408d1179a872c1c125129af90ec 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 2.5E-262 T 15-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 XDD1_0034 4c3c9408d1179a872c1c125129af90ec 460 SMART SM00382 142 405 2.8E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0034 4c3c9408d1179a872c1c125129af90ec 460 SUPERFAMILY SSF52540 77 348 2.48E-90 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2180 523c2440004b9d7f5b9b73341b34a737 464 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 4.9E-5 T 15-10-2018 XDD1_2180 523c2440004b9d7f5b9b73341b34a737 464 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 4.9E-5 T 15-10-2018 XDD1_2180 523c2440004b9d7f5b9b73341b34a737 464 Pfam PF10415 Fumarase C C-terminus 408 461 3.2E-26 T 15-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XDD1_2180 523c2440004b9d7f5b9b73341b34a737 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 461 9.6E-244 T 15-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XDD1_2180 523c2440004b9d7f5b9b73341b34a737 464 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 9.7E-34 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_2180 523c2440004b9d7f5b9b73341b34a737 464 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 9.7E-34 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_2180 523c2440004b9d7f5b9b73341b34a737 464 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 9.7E-34 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_2180 523c2440004b9d7f5b9b73341b34a737 464 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 9.7E-34 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_2180 523c2440004b9d7f5b9b73341b34a737 464 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 XDD1_2180 523c2440004b9d7f5b9b73341b34a737 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 93.036 T 15-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XDD1_2180 523c2440004b9d7f5b9b73341b34a737 464 Gene3D G3DSA:1.10.40.30 408 464 2.1E-31 T 15-10-2018 XDD1_2180 523c2440004b9d7f5b9b73341b34a737 464 Gene3D G3DSA:1.10.275.10 5 138 3.6E-55 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal XDD1_2180 523c2440004b9d7f5b9b73341b34a737 464 Pfam PF00206 Lyase 12 342 1.8E-118 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal XDD1_2180 523c2440004b9d7f5b9b73341b34a737 464 Gene3D G3DSA:1.20.200.10 139 407 2.2E-121 T 15-10-2018 XDD1_2180 523c2440004b9d7f5b9b73341b34a737 464 SUPERFAMILY SSF48557 4 462 9.74E-161 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 XDD1_0653 cac0a3f64a7fca3cfaffb4c4e5051735 56 SUPERFAMILY SSF47413 1 52 1.37E-13 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_0653 cac0a3f64a7fca3cfaffb4c4e5051735 56 Pfam PF01381 Helix-turn-helix 1 46 1.4E-12 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_0653 cac0a3f64a7fca3cfaffb4c4e5051735 56 SMART SM00530 1 46 0.0022 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_0653 cac0a3f64a7fca3cfaffb4c4e5051735 56 Gene3D G3DSA:1.10.260.40 1 52 7.3E-16 T 15-10-2018 XDD1_3551 f25e10239635578306e4058788a92182 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 6.2E-38 T 15-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 XDD1_3551 f25e10239635578306e4058788a92182 162 PIRSF PIRSF018472 1 162 1.3E-50 T 15-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type XDD1_3551 f25e10239635578306e4058788a92182 162 Pfam PF04093 rod shape-determining protein MreD 7 154 1.5E-36 T 15-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 XDD1_2446 42547e0decdeb1040b5210743a3554de 287 SUPERFAMILY SSF51658 121 219 4.56E-7 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily XDD1_2446 42547e0decdeb1040b5210743a3554de 287 Gene3D G3DSA:3.20.20.150 6 270 3.1E-64 T 15-10-2018 XDD1_2446 42547e0decdeb1040b5210743a3554de 287 Pfam PF05114 Protein of unknown function (DUF692) 8 266 3.7E-72 T 15-10-2018 IPR007801 Uncharacterised protein family UPF0276 XDD1_1979 e5616f04bc2be68d6b6d40cbf0128f71 180 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 1.3E-13 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_1979 e5616f04bc2be68d6b6d40cbf0128f71 180 Gene3D G3DSA:1.10.357.10 2 178 1.4E-41 T 15-10-2018 XDD1_1979 e5616f04bc2be68d6b6d40cbf0128f71 180 SUPERFAMILY SSF46689 5 72 2.67E-15 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1979 e5616f04bc2be68d6b6d40cbf0128f71 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 3.2E-9 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_1979 e5616f04bc2be68d6b6d40cbf0128f71 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 3.2E-9 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_1979 e5616f04bc2be68d6b6d40cbf0128f71 180 SUPERFAMILY SSF48498 78 161 1.48E-9 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily XDD1_1217 8e817fac43af7735bf8195f8879151b1 373 SUPERFAMILY SSF48600 4 88 6.04E-24 T 15-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XDD1_1217 8e817fac43af7735bf8195f8879151b1 373 SUPERFAMILY SSF51735 92 238 1.61E-38 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1217 8e817fac43af7735bf8195f8879151b1 373 Pfam PF01817 Chorismate mutase type II 9 83 1.3E-20 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XDD1_1217 8e817fac43af7735bf8195f8879151b1 373 PIRSF PIRSF001499 1 373 6.3E-172 T 15-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 XDD1_1217 8e817fac43af7735bf8195f8879151b1 373 SMART SM00830 9 89 3.1E-29 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XDD1_1217 8e817fac43af7735bf8195f8879151b1 373 Pfam PF02153 Prephenate dehydrogenase 138 344 2.8E-30 T 15-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 XDD1_1217 8e817fac43af7735bf8195f8879151b1 373 SUPERFAMILY SSF48179 241 367 8.28E-43 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XDD1_1217 8e817fac43af7735bf8195f8879151b1 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 6 87 4.1E-42 T 15-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 XDD1_1217 8e817fac43af7735bf8195f8879151b1 373 Gene3D G3DSA:3.40.50.720 83 246 4.5E-44 T 15-10-2018 XDD1_1217 8e817fac43af7735bf8195f8879151b1 373 Gene3D G3DSA:1.20.59.10 1 82 2.4E-16 T 15-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XDD1_1217 8e817fac43af7735bf8195f8879151b1 373 Gene3D G3DSA:1.10.3660.10 248 373 9.6E-52 T 15-10-2018 XDD1_2948 6cfb028f5cf2177f6c6b04ca1728bbc8 786 Pfam PF12161 HsdM N-terminal domain 11 142 1.1E-19 T 15-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain XDD1_2948 6cfb028f5cf2177f6c6b04ca1728bbc8 786 Gene3D G3DSA:3.40.50.150 156 478 8.9E-88 T 15-10-2018 XDD1_2948 6cfb028f5cf2177f6c6b04ca1728bbc8 786 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 285 291 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XDD1_2948 6cfb028f5cf2177f6c6b04ca1728bbc8 786 Pfam PF02384 N-6 DNA Methylase 154 457 7.2E-56 T 15-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 XDD1_2948 6cfb028f5cf2177f6c6b04ca1728bbc8 786 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 177 193 3.3E-10 T 15-10-2018 XDD1_2948 6cfb028f5cf2177f6c6b04ca1728bbc8 786 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 210 224 3.3E-10 T 15-10-2018 XDD1_2948 6cfb028f5cf2177f6c6b04ca1728bbc8 786 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 282 294 3.3E-10 T 15-10-2018 XDD1_2948 6cfb028f5cf2177f6c6b04ca1728bbc8 786 SUPERFAMILY SSF53335 8 554 1.41E-112 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_3290 40a27a5bedf2db7f9c338558fb5107f9 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 49.889 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XDD1_3290 40a27a5bedf2db7f9c338558fb5107f9 319 Gene3D G3DSA:3.90.226.10 4 319 2.3E-120 T 15-10-2018 XDD1_3290 40a27a5bedf2db7f9c338558fb5107f9 319 SUPERFAMILY SSF52096 5 318 1.74E-103 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XDD1_3290 40a27a5bedf2db7f9c338558fb5107f9 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.2E-50 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XDD1_3290 40a27a5bedf2db7f9c338558fb5107f9 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.2E-50 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XDD1_3290 40a27a5bedf2db7f9c338558fb5107f9 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.2E-50 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XDD1_3290 40a27a5bedf2db7f9c338558fb5107f9 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.2E-50 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XDD1_3290 40a27a5bedf2db7f9c338558fb5107f9 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.2E-50 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XDD1_3290 40a27a5bedf2db7f9c338558fb5107f9 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.2E-50 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XDD1_3290 40a27a5bedf2db7f9c338558fb5107f9 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 3.6E-165 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XDD1_3290 40a27a5bedf2db7f9c338558fb5107f9 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 7.9E-63 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XDD1_1243 e3cde7551bc582430eaf6abdada47259 528 Gene3D G3DSA:3.90.1150.170 80 506 2.6E-132 T 15-10-2018 XDD1_1243 e3cde7551bc582430eaf6abdada47259 528 SUPERFAMILY SSF53383 35 509 1.13E-123 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_1243 e3cde7551bc582430eaf6abdada47259 528 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 85 444 1.7E-68 T 15-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 XDD1_1243 e3cde7551bc582430eaf6abdada47259 528 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 426 445 3.4E-5 T 15-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 XDD1_1243 e3cde7551bc582430eaf6abdada47259 528 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 148 167 3.4E-5 T 15-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 XDD1_1243 e3cde7551bc582430eaf6abdada47259 528 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 383 398 3.4E-5 T 15-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 XDD1_1243 e3cde7551bc582430eaf6abdada47259 528 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 108 127 3.4E-5 T 15-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 XDD1_1243 e3cde7551bc582430eaf6abdada47259 528 Gene3D G3DSA:3.40.640.10 135 388 2.6E-132 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_1634 486414ad91f2be2d15f4847cc3807c82 722 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 14 714 1.8E-270 T 15-10-2018 IPR010020 Integral membrane protein, YccS/YhfK XDD1_1634 486414ad91f2be2d15f4847cc3807c82 722 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 14 715 1.6E-295 T 15-10-2018 IPR010019 Integral membrane protein, YccS XDD1_1634 486414ad91f2be2d15f4847cc3807c82 722 Pfam PF12805 FUSC-like inner membrane protein yccS 69 349 3.7E-107 T 15-10-2018 IPR032692 Integral membrane protein YccS, N-terminal XDD1_1634 486414ad91f2be2d15f4847cc3807c82 722 Pfam PF13515 Fusaric acid resistance protein-like 415 534 1.1E-24 T 15-10-2018 XDD1_2733 a0c5df5d142ba47e529321ddcaa47290 362 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_2733 a0c5df5d142ba47e529321ddcaa47290 362 Gene3D G3DSA:3.40.50.300 2 256 3.4E-78 T 15-10-2018 XDD1_2733 a0c5df5d142ba47e529321ddcaa47290 362 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 5.1E-120 T 15-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 XDD1_2733 a0c5df5d142ba47e529321ddcaa47290 362 Pfam PF00005 ABC transporter 18 164 7.6E-37 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_2733 a0c5df5d142ba47e529321ddcaa47290 362 SUPERFAMILY SSF52540 3 243 3.93E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2733 a0c5df5d142ba47e529321ddcaa47290 362 SMART SM00382 27 214 2.2E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_2733 a0c5df5d142ba47e529321ddcaa47290 362 SUPERFAMILY SSF50331 239 328 7.94E-10 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal XDD1_3360 12bb3256708fdfbf731e1f27752354e5 638 SUPERFAMILY SSF52540 306 635 2.83E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3360 12bb3256708fdfbf731e1f27752354e5 638 Gene3D G3DSA:3.40.50.300 123 383 4.0E-77 T 15-10-2018 XDD1_3360 12bb3256708fdfbf731e1f27752354e5 638 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 8 633 2.8E-189 T 15-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 XDD1_3360 12bb3256708fdfbf731e1f27752354e5 638 Pfam PF13604 AAA domain 180 342 3.2E-31 T 15-10-2018 XDD1_3360 12bb3256708fdfbf731e1f27752354e5 638 Pfam PF13538 UvrD-like helicase C-terminal domain 564 610 2.0E-14 T 15-10-2018 IPR027785 UvrD-like helicase C-terminal domain XDD1_3360 12bb3256708fdfbf731e1f27752354e5 638 Gene3D G3DSA:1.10.10.1020 3 122 1.9E-29 T 15-10-2018 XDD1_3360 12bb3256708fdfbf731e1f27752354e5 638 Gene3D G3DSA:3.40.50.300 505 624 3.5E-28 T 15-10-2018 XDD1_3360 12bb3256708fdfbf731e1f27752354e5 638 Gene3D G3DSA:3.40.50.300 393 504 2.7E-29 T 15-10-2018 XDD1_3360 12bb3256708fdfbf731e1f27752354e5 638 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 17 633 51.758 T 15-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 XDD1_3360 12bb3256708fdfbf731e1f27752354e5 638 SUPERFAMILY SSF52540 8 388 8.95E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0948 a21c73537218bd92f7d0fc636e5c63ed 203 SMART SM00530 6 60 3.6E-12 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_0948 a21c73537218bd92f7d0fc636e5c63ed 203 Gene3D G3DSA:1.10.260.40 1 69 1.1E-21 T 15-10-2018 XDD1_0948 a21c73537218bd92f7d0fc636e5c63ed 203 Gene3D G3DSA:2.10.109.10 118 199 1.8E-6 T 15-10-2018 XDD1_0948 a21c73537218bd92f7d0fc636e5c63ed 203 SUPERFAMILY SSF51306 127 199 7.85E-10 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XDD1_0948 a21c73537218bd92f7d0fc636e5c63ed 203 SUPERFAMILY SSF47413 1 66 6.76E-14 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_0948 a21c73537218bd92f7d0fc636e5c63ed 203 Pfam PF01381 Helix-turn-helix 7 60 1.1E-9 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_0164 7ac9b8f00874c2d40f63c2316a118ed0 343 Pfam PF02719 Polysaccharide biosynthesis protein 7 281 5.4E-103 T 15-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain XDD1_0164 7ac9b8f00874c2d40f63c2316a118ed0 343 Gene3D G3DSA:3.40.50.720 4 308 9.8E-133 T 15-10-2018 XDD1_0164 7ac9b8f00874c2d40f63c2316a118ed0 343 Gene3D G3DSA:3.90.25.30 165 320 9.8E-133 T 15-10-2018 XDD1_0164 7ac9b8f00874c2d40f63c2316a118ed0 343 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 284 330 9.0E-22 T 15-10-2018 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 XDD1_0164 7ac9b8f00874c2d40f63c2316a118ed0 343 SUPERFAMILY SSF51735 1 264 1.93E-57 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1522 01b8f582d7807f737eae9b729d84e5a7 258 Gene3D G3DSA:3.20.20.70 1 258 3.0E-90 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_1522 01b8f582d7807f737eae9b729d84e5a7 258 SUPERFAMILY SSF51366 1 257 6.04E-72 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XDD1_1522 01b8f582d7807f737eae9b729d84e5a7 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 3.2E-113 T 15-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 XDD1_1522 01b8f582d7807f737eae9b729d84e5a7 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 43.873 T 15-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 XDD1_1522 01b8f582d7807f737eae9b729d84e5a7 258 Pfam PF00977 Histidine biosynthesis protein 5 239 1.8E-74 T 15-10-2018 IPR006062 Histidine biosynthesis GO:0000105 XDD1_0300 da1d96b129684013216f9700713f3ace 443 Gene3D G3DSA:1.10.3370.10 13 429 2.1E-163 T 15-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XDD1_0300 da1d96b129684013216f9700713f3ace 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 15-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XDD1_0300 da1d96b129684013216f9700713f3ace 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 2.8E-140 T 15-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XDD1_0300 da1d96b129684013216f9700713f3ace 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 2.1E-98 T 15-10-2018 XDD1_0300 da1d96b129684013216f9700713f3ace 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 2.1E-98 T 15-10-2018 XDD1_0300 da1d96b129684013216f9700713f3ace 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 2.1E-98 T 15-10-2018 XDD1_0300 da1d96b129684013216f9700713f3ace 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 2.1E-98 T 15-10-2018 XDD1_0300 da1d96b129684013216f9700713f3ace 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 2.1E-98 T 15-10-2018 XDD1_0300 da1d96b129684013216f9700713f3ace 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 2.1E-98 T 15-10-2018 XDD1_0300 da1d96b129684013216f9700713f3ace 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 2.1E-98 T 15-10-2018 XDD1_0300 da1d96b129684013216f9700713f3ace 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 2.1E-98 T 15-10-2018 XDD1_0300 da1d96b129684013216f9700713f3ace 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 2.1E-98 T 15-10-2018 XDD1_0300 da1d96b129684013216f9700713f3ace 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 15-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XDD1_0300 da1d96b129684013216f9700713f3ace 443 SUPERFAMILY SSF103491 16 424 1.44E-133 T 15-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XDD1_0300 da1d96b129684013216f9700713f3ace 443 Pfam PF00344 SecY translocase 76 417 5.9E-119 T 15-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XDD1_0300 da1d96b129684013216f9700713f3ace 443 PIRSF PIRSF004557 11 441 4.6E-123 T 15-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XDD1_0300 da1d96b129684013216f9700713f3ace 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 29.874 T 15-10-2018 IPR026593 Protein translocase subunit SecY XDD1_0696 7836136829feea5f9118c9aa85697406 371 Gene3D G3DSA:2.40.50.940 229 291 9.7E-10 T 15-10-2018 XDD1_0696 7836136829feea5f9118c9aa85697406 371 SMART SM00382 35 218 1.3E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0696 7836136829feea5f9118c9aa85697406 371 Pfam PF00005 ABC transporter 28 167 1.3E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_0696 7836136829feea5f9118c9aa85697406 371 SUPERFAMILY SSF52540 10 250 2.0E-87 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0696 7836136829feea5f9118c9aa85697406 371 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 41 365 1.9E-158 T 15-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 XDD1_0696 7836136829feea5f9118c9aa85697406 371 SUPERFAMILY SSF50331 243 363 5.38E-7 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal XDD1_0696 7836136829feea5f9118c9aa85697406 371 Gene3D G3DSA:3.40.50.300 10 228 9.1E-70 T 15-10-2018 XDD1_0696 7836136829feea5f9118c9aa85697406 371 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_0696 7836136829feea5f9118c9aa85697406 371 Pfam PF08402 TOBE domain 285 365 1.3E-7 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 XDD1_0696 7836136829feea5f9118c9aa85697406 371 Gene3D G3DSA:2.40.50.140 292 307 9.7E-10 T 15-10-2018 XDD1_1169 815d0a92d9c4655364b23968ad2ebaf1 235 SUPERFAMILY SSF141523 28 148 4.97E-10 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like XDD1_1169 815d0a92d9c4655364b23968ad2ebaf1 235 Pfam PF03734 L,D-transpeptidase catalytic domain 34 149 6.5E-8 T 15-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 XDD1_3373 74a1178e932548a8f010f1dbd9dd1a88 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 15-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 XDD1_3373 74a1178e932548a8f010f1dbd9dd1a88 748 Gene3D G3DSA:3.30.450.40 1 163 6.1E-42 T 15-10-2018 IPR029016 GAF-like domain superfamily XDD1_3373 74a1178e932548a8f010f1dbd9dd1a88 748 SMART SM00065 17 164 2.5E-22 T 15-10-2018 IPR003018 GAF domain GO:0005515 XDD1_3373 74a1178e932548a8f010f1dbd9dd1a88 748 SUPERFAMILY SSF55781 4 158 9.38E-29 T 15-10-2018 XDD1_3373 74a1178e932548a8f010f1dbd9dd1a88 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 175 730 1.5E-129 T 15-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 XDD1_3373 74a1178e932548a8f010f1dbd9dd1a88 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 1.1E-14 T 15-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 XDD1_3373 74a1178e932548a8f010f1dbd9dd1a88 748 SUPERFAMILY SSF51621 424 715 3.4E-96 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XDD1_3373 74a1178e932548a8f010f1dbd9dd1a88 748 Gene3D G3DSA:1.10.274.10 190 313 3.6E-54 T 15-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 XDD1_3373 74a1178e932548a8f010f1dbd9dd1a88 748 SUPERFAMILY SSF52009 293 411 9.55E-25 T 15-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 XDD1_3373 74a1178e932548a8f010f1dbd9dd1a88 748 Gene3D G3DSA:3.50.30.10 175 399 3.6E-54 T 15-10-2018 XDD1_3373 74a1178e932548a8f010f1dbd9dd1a88 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 422 707 3.0E-98 T 15-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 XDD1_3373 74a1178e932548a8f010f1dbd9dd1a88 748 SUPERFAMILY SSF47831 201 309 3.92E-28 T 15-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 XDD1_3373 74a1178e932548a8f010f1dbd9dd1a88 748 Pfam PF01590 GAF domain 17 153 3.0E-14 T 15-10-2018 IPR003018 GAF domain GO:0005515 XDD1_3373 74a1178e932548a8f010f1dbd9dd1a88 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 173 294 4.6E-24 T 15-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 XDD1_3373 74a1178e932548a8f010f1dbd9dd1a88 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 2.7E-22 T 15-10-2018 XDD1_3373 74a1178e932548a8f010f1dbd9dd1a88 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 2.7E-22 T 15-10-2018 XDD1_3373 74a1178e932548a8f010f1dbd9dd1a88 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 2.7E-22 T 15-10-2018 XDD1_3373 74a1178e932548a8f010f1dbd9dd1a88 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 2.7E-22 T 15-10-2018 XDD1_3373 74a1178e932548a8f010f1dbd9dd1a88 748 Gene3D G3DSA:3.20.20.60 400 741 3.0E-103 T 15-10-2018 XDD1_2959 73e80fc295e4038a1dd8f4ba4792425b 333 SUPERFAMILY SSF103025 18 246 1.4E-61 T 15-10-2018 XDD1_2959 73e80fc295e4038a1dd8f4ba4792425b 333 Pfam PF01571 Aminomethyltransferase folate-binding domain 34 139 2.3E-7 T 15-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain XDD1_2959 73e80fc295e4038a1dd8f4ba4792425b 333 PIRSF PIRSF006487 21 288 2.1E-10 T 15-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 XDD1_2959 73e80fc295e4038a1dd8f4ba4792425b 333 Gene3D G3DSA:3.30.70.1630 25 197 5.5E-56 T 15-10-2018 XDD1_2959 73e80fc295e4038a1dd8f4ba4792425b 333 Gene3D G3DSA:3.30.70.1400 28 114 5.5E-56 T 15-10-2018 XDD1_2959 73e80fc295e4038a1dd8f4ba4792425b 333 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 326 46.793 T 15-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 XDD1_2959 73e80fc295e4038a1dd8f4ba4792425b 333 Gene3D G3DSA:2.40.30.160 200 323 7.7E-43 T 15-10-2018 XDD1_2959 73e80fc295e4038a1dd8f4ba4792425b 333 SUPERFAMILY SSF101790 248 330 4.18E-26 T 15-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal XDD1_2959 73e80fc295e4038a1dd8f4ba4792425b 333 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 191 256 2.2E-23 T 15-10-2018 IPR017703 YgfZ/GcvT conserved site XDD1_3153 6c160cb2dc9c52f3e1b4af9d4baede83 342 Pfam PF08279 HTH domain 285 337 8.1E-13 T 15-10-2018 IPR013196 Helix-turn-helix, type 11 XDD1_3153 6c160cb2dc9c52f3e1b4af9d4baede83 342 SUPERFAMILY SSF46785 282 339 3.9E-10 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3153 6c160cb2dc9c52f3e1b4af9d4baede83 342 Pfam PF02661 Fic/DOC family 101 196 7.0E-23 T 15-10-2018 IPR003812 Fido domain XDD1_3153 6c160cb2dc9c52f3e1b4af9d4baede83 342 SUPERFAMILY SSF140931 79 252 9.42E-40 T 15-10-2018 IPR036597 Fido-like domain superfamily XDD1_3153 6c160cb2dc9c52f3e1b4af9d4baede83 342 Gene3D G3DSA:1.10.10.10 269 339 3.1E-9 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3153 6c160cb2dc9c52f3e1b4af9d4baede83 342 Gene3D G3DSA:1.10.3290.10 30 257 6.7E-51 T 15-10-2018 IPR036597 Fido-like domain superfamily XDD1_3660 90455d71079f2f5d9496e91b6e8e5178 647 Gene3D G3DSA:3.40.50.300 7 274 2.1E-61 T 15-10-2018 XDD1_3660 90455d71079f2f5d9496e91b6e8e5178 647 Pfam PF16326 ABC transporter C-terminal domain 571 634 1.2E-8 T 15-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 XDD1_3660 90455d71079f2f5d9496e91b6e8e5178 647 SMART SM00382 26 223 4.6E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3660 90455d71079f2f5d9496e91b6e8e5178 647 SMART SM00382 337 504 4.9E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3660 90455d71079f2f5d9496e91b6e8e5178 647 Pfam PF12848 ABC transporter 217 297 5.2E-29 T 15-10-2018 IPR032781 ABC-transporter extension domain XDD1_3660 90455d71079f2f5d9496e91b6e8e5178 647 Pfam PF00005 ABC transporter 328 459 8.0E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_3660 90455d71079f2f5d9496e91b6e8e5178 647 SUPERFAMILY SSF52540 2 250 1.41E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3660 90455d71079f2f5d9496e91b6e8e5178 647 SUPERFAMILY SSF52540 294 516 1.18E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3660 90455d71079f2f5d9496e91b6e8e5178 647 Gene3D G3DSA:3.40.50.300 276 540 2.0E-60 T 15-10-2018 XDD1_3660 90455d71079f2f5d9496e91b6e8e5178 647 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_3660 90455d71079f2f5d9496e91b6e8e5178 647 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_3660 90455d71079f2f5d9496e91b6e8e5178 647 Pfam PF00005 ABC transporter 17 178 2.0E-24 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_3212 1e5922a204b3486a9873eecf04e2560e 111 Pfam PF13358 DDE superfamily endonuclease 16 91 2.6E-11 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0729 05bf857001005040f5206922d62240a7 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 XDD1_0729 05bf857001005040f5206922d62240a7 256 PIRSF PIRSF005902 1 256 5.5E-71 T 15-10-2018 IPR001130 TatD family GO:0016788 XDD1_0729 05bf857001005040f5206922d62240a7 256 Pfam PF01026 TatD related DNase 3 253 4.9E-68 T 15-10-2018 IPR001130 TatD family GO:0016788 XDD1_0729 05bf857001005040f5206922d62240a7 256 SUPERFAMILY SSF51556 2 254 9.34E-79 T 15-10-2018 IPR032466 Metal-dependent hydrolase XDD1_0729 05bf857001005040f5206922d62240a7 256 Gene3D G3DSA:3.20.20.140 1 255 8.0E-90 T 15-10-2018 XDD1_1023 9d64b2a8614796c686e0414ea98f32d7 293 SUPERFAMILY SSF53213 12 279 6.8E-53 T 15-10-2018 XDD1_1023 9d64b2a8614796c686e0414ea98f32d7 293 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 279 1.6E-87 T 15-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 XDD1_1023 9d64b2a8614796c686e0414ea98f32d7 293 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 281 1.2E-156 T 15-10-2018 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase GO:0008687 KEGG: 00350+1.13.11.15 XDD1_1023 9d64b2a8614796c686e0414ea98f32d7 293 Gene3D G3DSA:3.40.830.10 1 290 7.9E-85 T 15-10-2018 XDD1_3879 9fb0bb4321db04f984341c9000ab524f 99 Gene3D G3DSA:3.30.420.470 2 89 2.8E-9 T 15-10-2018 XDD1_3879 9fb0bb4321db04f984341c9000ab524f 99 Pfam PF13358 DDE superfamily endonuclease 2 70 2.1E-17 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2304 19c31b8e033a54cf92516b1faf5cde83 341 SUPERFAMILY SSF46689 12 123 3.85E-18 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2304 19c31b8e033a54cf92516b1faf5cde83 341 SUPERFAMILY SSF53098 213 314 5.01E-8 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_2304 19c31b8e033a54cf92516b1faf5cde83 341 Pfam PF13358 DDE superfamily endonuclease 161 305 1.7E-37 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2304 19c31b8e033a54cf92516b1faf5cde83 341 Gene3D G3DSA:3.30.420.470 124 340 4.9E-12 T 15-10-2018 XDD1_2304 19c31b8e033a54cf92516b1faf5cde83 341 Pfam PF13592 Winged helix-turn helix 92 147 1.1E-18 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_1961 255578476de5922eb4db0f8a7fef2dde 698 Gene3D G3DSA:2.40.170.20 161 698 2.7E-64 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XDD1_1961 255578476de5922eb4db0f8a7fef2dde 698 Gene3D G3DSA:2.170.130.10 21 152 3.4E-21 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XDD1_1961 255578476de5922eb4db0f8a7fef2dde 698 SUPERFAMILY SSF56935 28 698 7.33E-94 T 15-10-2018 XDD1_1961 255578476de5922eb4db0f8a7fef2dde 698 Pfam PF00593 TonB dependent receptor 250 696 1.9E-35 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XDD1_1961 255578476de5922eb4db0f8a7fef2dde 698 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 145 4.9E-15 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain XDD1_1961 255578476de5922eb4db0f8a7fef2dde 698 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 35 - T 15-10-2018 IPR010916 TonB box, conserved site XDD1_0791 01b6ee167df56c78b5bbfbcab93dba8d 408 Gene3D G3DSA:3.40.50.300 231 399 2.2E-58 T 15-10-2018 XDD1_0791 01b6ee167df56c78b5bbfbcab93dba8d 408 SUPERFAMILY SSF52540 232 403 3.54E-28 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0791 01b6ee167df56c78b5bbfbcab93dba8d 408 Pfam PF01381 Helix-turn-helix 7 57 2.4E-9 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_0791 01b6ee167df56c78b5bbfbcab93dba8d 408 SUPERFAMILY SSF47413 6 58 2.96E-9 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_0791 01b6ee167df56c78b5bbfbcab93dba8d 408 PIRSF PIRSF004776 3 408 2.4E-201 T 15-10-2018 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 XDD1_0791 01b6ee167df56c78b5bbfbcab93dba8d 408 Pfam PF13521 AAA domain 234 394 4.9E-33 T 15-10-2018 IPR038727 NadR/Ttd14, AAA domain XDD1_0791 01b6ee167df56c78b5bbfbcab93dba8d 408 SMART SM00530 6 62 1.7E-7 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_0791 01b6ee167df56c78b5bbfbcab93dba8d 408 Gene3D G3DSA:1.10.260.40 5 64 2.7E-7 T 15-10-2018 XDD1_0791 01b6ee167df56c78b5bbfbcab93dba8d 408 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 8.7E-152 T 15-10-2018 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0000309|GO:0009435 KEGG: 00760+2.7.7.1+2.7.1.22 XDD1_0791 01b6ee167df56c78b5bbfbcab93dba8d 408 SUPERFAMILY SSF52374 64 223 3.75E-20 T 15-10-2018 XDD1_0791 01b6ee167df56c78b5bbfbcab93dba8d 408 Gene3D G3DSA:3.40.50.620 65 230 2.1E-43 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_0791 01b6ee167df56c78b5bbfbcab93dba8d 408 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 6.6E-18 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XDD1_3556 b1114ece663e5b29775183983a9d55c6 150 PIRSF PIRSF001399 3 149 1.3E-60 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XDD1_3556 b1114ece663e5b29775183983a9d55c6 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 20 150 6.0E-61 T 15-10-2018 XDD1_3556 b1114ece663e5b29775183983a9d55c6 150 SUPERFAMILY SSF52304 6 147 2.09E-63 T 15-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XDD1_3556 b1114ece663e5b29775183983a9d55c6 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 8.4E-63 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XDD1_3556 b1114ece663e5b29775183983a9d55c6 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 75.129 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XDD1_3556 b1114ece663e5b29775183983a9d55c6 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 15-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XDD1_3556 b1114ece663e5b29775183983a9d55c6 150 Pfam PF01220 Dehydroquinase class II 6 142 6.8E-62 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XDD1_3556 b1114ece663e5b29775183983a9d55c6 150 Gene3D G3DSA:3.40.50.9100 1 150 3.1E-68 T 15-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XDD1_1611 0cdad4e82e8b6498f75c4225a9cba191 175 SUPERFAMILY SSF52309 29 127 2.69E-11 T 15-10-2018 XDD1_1611 0cdad4e82e8b6498f75c4225a9cba191 175 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 36 124 2.7E-8 T 15-10-2018 IPR007710 Nucleoside 2-deoxyribosyltransferase Reactome: R-HSA-74259 XDD1_1611 0cdad4e82e8b6498f75c4225a9cba191 175 Gene3D G3DSA:3.40.50.450 4 171 1.9E-41 T 15-10-2018 XDD1_3439 22bc5badcca4c51a628dba7cdc29612c 165 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 136 1.8E-27 T 15-10-2018 IPR009678 Bacteriophage tail completion protein R XDD1_1934 ce647260225e6aa326206e8d7413ce9c 313 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 127 261 4.0E-5 T 15-10-2018 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal XDD1_1934 ce647260225e6aa326206e8d7413ce9c 313 SUPERFAMILY SSF53474 27 286 1.73E-16 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1934 ce647260225e6aa326206e8d7413ce9c 313 Gene3D G3DSA:3.40.50.1820 14 303 2.3E-18 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_3552 6827d6c66bfc1eb84a76711c8401e02c 339 Pfam PF04085 rod shape-determining protein MreC 123 269 7.5E-36 T 15-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 XDD1_3552 6827d6c66bfc1eb84a76711c8401e02c 339 PIRSF PIRSF038471 2 284 1.4E-72 T 15-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 XDD1_3552 6827d6c66bfc1eb84a76711c8401e02c 339 Gene3D G3DSA:2.40.10.350 180 257 3.5E-33 T 15-10-2018 XDD1_3552 6827d6c66bfc1eb84a76711c8401e02c 339 Gene3D G3DSA:2.40.10.340 122 266 3.5E-33 T 15-10-2018 XDD1_3552 6827d6c66bfc1eb84a76711c8401e02c 339 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 276 5.5E-104 T 15-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 XDD1_3364 04618cc99b7be76efa8e92a906cb6b70 129 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 36 4.8E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site XDD1_3364 04618cc99b7be76efa8e92a906cb6b70 129 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 38 122 1.3E-24 T 15-10-2018 IPR022204 Prepilin peptidase dependent protein C XDD1_3364 04618cc99b7be76efa8e92a906cb6b70 129 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 14 34 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site XDD1_3364 04618cc99b7be76efa8e92a906cb6b70 129 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 35 5.7E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site XDD1_0981 9ba8c70d0a9f26ea1e3c8b589eaee899 239 Pfam PF08241 Methyltransferase domain 77 125 2.2E-5 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 XDD1_0981 9ba8c70d0a9f26ea1e3c8b589eaee899 239 Gene3D G3DSA:3.40.50.150 58 191 9.6E-9 T 15-10-2018 XDD1_0981 9ba8c70d0a9f26ea1e3c8b589eaee899 239 SUPERFAMILY SSF53335 78 189 2.23E-11 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_0745 444408b2aeae974dab36d46f6afd29c9 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 9.5E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0745 444408b2aeae974dab36d46f6afd29c9 310 SUPERFAMILY SSF46785 11 93 2.41E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_0745 444408b2aeae974dab36d46f6afd29c9 310 Pfam PF03466 LysR substrate binding domain 95 299 1.4E-43 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_0745 444408b2aeae974dab36d46f6afd29c9 310 Gene3D G3DSA:1.10.10.10 9 91 4.6E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0745 444408b2aeae974dab36d46f6afd29c9 310 Gene3D G3DSA:3.40.190.10 97 298 1.9E-66 T 15-10-2018 XDD1_0745 444408b2aeae974dab36d46f6afd29c9 310 SUPERFAMILY SSF53850 95 304 2.9E-46 T 15-10-2018 XDD1_0745 444408b2aeae974dab36d46f6afd29c9 310 Gene3D G3DSA:3.40.190.10 169 270 1.9E-66 T 15-10-2018 XDD1_1999 71ebacbc66117738ba6eb023f830945d 676 SMART SM00869 418 664 4.1E-19 T 15-10-2018 IPR005546 Autotransporter beta-domain XDD1_1999 71ebacbc66117738ba6eb023f830945d 676 Pfam PF03797 Autotransporter beta-domain 414 653 7.8E-34 T 15-10-2018 IPR005546 Autotransporter beta-domain XDD1_1999 71ebacbc66117738ba6eb023f830945d 676 PIRSF PIRSF037375 1 676 2.9E-179 T 15-10-2018 IPR017186 Lipase, autotransporter EstA XDD1_1999 71ebacbc66117738ba6eb023f830945d 676 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 30 374 2.5E-8 T 15-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 XDD1_1999 71ebacbc66117738ba6eb023f830945d 676 SUPERFAMILY SSF103515 398 676 2.09E-32 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily XDD1_1999 71ebacbc66117738ba6eb023f830945d 676 Gene3D G3DSA:2.40.128.130 389 676 6.8E-45 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily XDD1_1999 71ebacbc66117738ba6eb023f830945d 676 SUPERFAMILY SSF52266 29 378 7.82E-8 T 15-10-2018 XDD1_1999 71ebacbc66117738ba6eb023f830945d 676 Gene3D G3DSA:3.40.50.1110 17 233 2.2E-25 T 15-10-2018 IPR036514 SGNH hydrolase superfamily XDD1_1999 71ebacbc66117738ba6eb023f830945d 676 Gene3D G3DSA:3.40.50.1110 263 386 9.2E-23 T 15-10-2018 IPR036514 SGNH hydrolase superfamily XDD1_0677 d2d2cd417e54c3d850d3c511b2d8575d 349 Pfam PF13551 Winged helix-turn helix 32 88 1.8E-8 T 15-10-2018 XDD1_0677 d2d2cd417e54c3d850d3c511b2d8575d 349 Pfam PF13358 DDE superfamily endonuclease 169 313 2.9E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0677 d2d2cd417e54c3d850d3c511b2d8575d 349 SUPERFAMILY SSF53098 222 322 1.08E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0677 d2d2cd417e54c3d850d3c511b2d8575d 349 Pfam PF13592 Winged helix-turn helix 100 155 3.8E-19 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_0677 d2d2cd417e54c3d850d3c511b2d8575d 349 SUPERFAMILY SSF46689 17 131 7.08E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0677 d2d2cd417e54c3d850d3c511b2d8575d 349 Gene3D G3DSA:3.30.420.470 142 342 8.6E-12 T 15-10-2018 XDD1_1578 fe10dfaf7ba206dd05d4fd8cb9d1dbb3 333 SUPERFAMILY SSF52540 46 163 3.72E-15 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1578 fe10dfaf7ba206dd05d4fd8cb9d1dbb3 333 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 14 317 4.1E-115 T 15-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 XDD1_1578 fe10dfaf7ba206dd05d4fd8cb9d1dbb3 333 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 320 4.2E-101 T 15-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 XDD1_1578 fe10dfaf7ba206dd05d4fd8cb9d1dbb3 333 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 325 40.844 T 15-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 XDD1_0693 a03e0e49352b6aee184ab497ce3e7f44 348 Gene3D G3DSA:3.40.190.10 132 321 3.2E-120 T 15-10-2018 XDD1_0693 a03e0e49352b6aee184ab497ce3e7f44 348 PIRSF PIRSF019574 1 348 1.5E-125 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 XDD1_0693 a03e0e49352b6aee184ab497ce3e7f44 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 2.4E-91 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 XDD1_0693 a03e0e49352b6aee184ab497ce3e7f44 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 2.4E-91 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 XDD1_0693 a03e0e49352b6aee184ab497ce3e7f44 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 2.4E-91 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 XDD1_0693 a03e0e49352b6aee184ab497ce3e7f44 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 293 319 2.4E-91 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 XDD1_0693 a03e0e49352b6aee184ab497ce3e7f44 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 2.4E-91 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 XDD1_0693 a03e0e49352b6aee184ab497ce3e7f44 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 2.4E-91 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 XDD1_0693 a03e0e49352b6aee184ab497ce3e7f44 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 2.4E-91 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 XDD1_0693 a03e0e49352b6aee184ab497ce3e7f44 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 2.4E-91 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 XDD1_0693 a03e0e49352b6aee184ab497ce3e7f44 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 149 163 2.4E-91 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 XDD1_0693 a03e0e49352b6aee184ab497ce3e7f44 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 248 267 2.4E-91 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 XDD1_0693 a03e0e49352b6aee184ab497ce3e7f44 348 Pfam PF13343 Bacterial extracellular solute-binding protein 75 319 4.1E-37 T 15-10-2018 XDD1_0693 a03e0e49352b6aee184ab497ce3e7f44 348 SUPERFAMILY SSF53850 26 345 1.09E-92 T 15-10-2018 XDD1_0693 a03e0e49352b6aee184ab497ce3e7f44 348 Gene3D G3DSA:3.40.190.10 31 315 3.2E-120 T 15-10-2018 XDD1_0564 8242b87f274b33b5bb338b95871cc121 173 Gene3D G3DSA:2.30.110.10 5 172 2.5E-41 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 XDD1_0564 8242b87f274b33b5bb338b95871cc121 173 SUPERFAMILY SSF50475 10 167 6.38E-39 T 15-10-2018 XDD1_0564 8242b87f274b33b5bb338b95871cc121 173 SMART SM00903 22 166 8.4E-46 T 15-10-2018 IPR002563 Flavin reductase like domain GO:0010181 XDD1_0564 8242b87f274b33b5bb338b95871cc121 173 Pfam PF01613 Flavin reductase like domain 23 167 5.8E-32 T 15-10-2018 IPR002563 Flavin reductase like domain GO:0010181 XDD1_2900 ac3240c8b1bafc8cbe734eaf14fbedfc 78 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 3.2E-20 T 15-10-2018 IPR007684 Zinc finger, Ogr/Delta-type XDD1_0890 af4e222e5560ba208443921418708586 426 PRINTS PR00342 Rhesus blood group protein signature 251 273 1.3E-6 T 15-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 XDD1_0890 af4e222e5560ba208443921418708586 426 PRINTS PR00342 Rhesus blood group protein signature 306 324 1.3E-6 T 15-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 XDD1_0890 af4e222e5560ba208443921418708586 426 PRINTS PR00342 Rhesus blood group protein signature 220 238 1.3E-6 T 15-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 XDD1_0890 af4e222e5560ba208443921418708586 426 PRINTS PR00342 Rhesus blood group protein signature 125 141 1.3E-6 T 15-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 XDD1_0890 af4e222e5560ba208443921418708586 426 TIGRFAM TIGR00836 amt: ammonium transporter 30 425 8.6E-130 T 15-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 XDD1_0890 af4e222e5560ba208443921418708586 426 SUPERFAMILY SSF111352 26 406 1.96E-123 T 15-10-2018 XDD1_0890 af4e222e5560ba208443921418708586 426 Gene3D G3DSA:1.10.3430.10 23 406 3.2E-138 T 15-10-2018 IPR029020 Ammonium/urea transporter XDD1_0890 af4e222e5560ba208443921418708586 426 Pfam PF00909 Ammonium Transporter Family 32 425 1.1E-119 T 15-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 XDD1_2313 10389b3e27182007a5ee60db82851c7b 454 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 363 372 - T 15-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XDD1_2313 10389b3e27182007a5ee60db82851c7b 454 SMART SM00382 173 356 6.6E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_2313 10389b3e27182007a5ee60db82851c7b 454 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 161 372 2.9E-72 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XDD1_2313 10389b3e27182007a5ee60db82851c7b 454 SUPERFAMILY SSF52540 108 378 1.02E-92 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2313 10389b3e27182007a5ee60db82851c7b 454 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 7 452 4.9E-189 T 15-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XDD1_2313 10389b3e27182007a5ee60db82851c7b 454 Gene3D G3DSA:3.40.50.12240 20 454 5.0E-167 T 15-10-2018 XDD1_2313 10389b3e27182007a5ee60db82851c7b 454 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 451 3.0E-197 T 15-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XDD1_3637 4ea367b283f65d39afc4ba710ee2427f 420 Pfam PF02264 LamB porin 24 420 2.0E-143 T 15-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 XDD1_3637 4ea367b283f65d39afc4ba710ee2427f 420 Gene3D G3DSA:2.40.170.10 22 420 1.9E-165 T 15-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 XDD1_3637 4ea367b283f65d39afc4ba710ee2427f 420 SUPERFAMILY SSF56935 22 420 5.95E-144 T 15-10-2018 XDD1_3637 4ea367b283f65d39afc4ba710ee2427f 420 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 28 415 5.0E-179 T 15-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 XDD1_1528 35425e63e0b450793bb17004ca84e450 299 Gene3D G3DSA:3.40.190.10 103 192 8.7E-74 T 15-10-2018 XDD1_1528 35425e63e0b450793bb17004ca84e450 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 5.1E-48 T 15-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 XDD1_1528 35425e63e0b450793bb17004ca84e450 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 201 298 1.6E-30 T 15-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 XDD1_1528 35425e63e0b450793bb17004ca84e450 299 Gene3D G3DSA:3.30.70.120 226 299 7.0E-33 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal XDD1_1528 35425e63e0b450793bb17004ca84e450 299 SUPERFAMILY SSF54913 226 298 1.11E-20 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta XDD1_1528 35425e63e0b450793bb17004ca84e450 299 SUPERFAMILY SSF53850 6 224 2.96E-70 T 15-10-2018 XDD1_1528 35425e63e0b450793bb17004ca84e450 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 1.9E-57 T 15-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 XDD1_1528 35425e63e0b450793bb17004ca84e450 299 Gene3D G3DSA:3.40.190.10 7 221 8.7E-74 T 15-10-2018 XDD1_1528 35425e63e0b450793bb17004ca84e450 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 35.459 T 15-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 XDD1_1528 35425e63e0b450793bb17004ca84e450 299 Pfam PF08029 HisG, C-terminal domain 223 296 7.3E-23 T 15-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 XDD1_1528 35425e63e0b450793bb17004ca84e450 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 15-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 XDD1_3040 bcf4c14aa1ec7f0341b1d7da9bf3ad6c 456 Gene3D G3DSA:3.40.50.1100 40 153 1.3E-111 T 15-10-2018 XDD1_3040 bcf4c14aa1ec7f0341b1d7da9bf3ad6c 456 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 301 9.3E-66 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XDD1_3040 bcf4c14aa1ec7f0341b1d7da9bf3ad6c 456 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 15-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 XDD1_3040 bcf4c14aa1ec7f0341b1d7da9bf3ad6c 456 Gene3D G3DSA:3.10.580.10 334 456 1.1E-22 T 15-10-2018 XDD1_3040 bcf4c14aa1ec7f0341b1d7da9bf3ad6c 456 SMART SM00116 406 452 19.0 T 15-10-2018 IPR000644 CBS domain XDD1_3040 bcf4c14aa1ec7f0341b1d7da9bf3ad6c 456 SMART SM00116 342 389 0.002 T 15-10-2018 IPR000644 CBS domain XDD1_3040 bcf4c14aa1ec7f0341b1d7da9bf3ad6c 456 Pfam PF00571 CBS domain 344 388 8.6E-6 T 15-10-2018 IPR000644 CBS domain XDD1_3040 bcf4c14aa1ec7f0341b1d7da9bf3ad6c 456 Pfam PF00571 CBS domain 399 450 3.3E-8 T 15-10-2018 IPR000644 CBS domain XDD1_3040 bcf4c14aa1ec7f0341b1d7da9bf3ad6c 456 SUPERFAMILY SSF54631 343 453 9.6E-23 T 15-10-2018 XDD1_3040 bcf4c14aa1ec7f0341b1d7da9bf3ad6c 456 Gene3D G3DSA:3.40.50.1100 9 309 1.3E-111 T 15-10-2018 XDD1_3040 bcf4c14aa1ec7f0341b1d7da9bf3ad6c 456 SUPERFAMILY SSF53686 5 320 2.75E-96 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XDD1_2429 e6ecb500bf02f0c55fd6a779e58a037d 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 7.8E-81 T 15-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 XDD1_2429 e6ecb500bf02f0c55fd6a779e58a037d 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.343 T 15-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 XDD1_2429 e6ecb500bf02f0c55fd6a779e58a037d 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 15-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XDD1_2429 e6ecb500bf02f0c55fd6a779e58a037d 212 SUPERFAMILY SSF53328 2 207 1.83E-66 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XDD1_2429 e6ecb500bf02f0c55fd6a779e58a037d 212 Gene3D G3DSA:3.40.50.170 2 212 1.1E-86 T 15-10-2018 XDD1_2429 e6ecb500bf02f0c55fd6a779e58a037d 212 Pfam PF00551 Formyl transferase 2 182 1.1E-66 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XDD1_0687 3b6b93b7cda03f91dc481aa87b10d67e 339 SUPERFAMILY SSF51735 1 330 8.65E-62 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0687 3b6b93b7cda03f91dc481aa87b10d67e 339 Gene3D G3DSA:3.40.50.720 1 334 1.4E-66 T 15-10-2018 XDD1_0687 3b6b93b7cda03f91dc481aa87b10d67e 339 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 233 1.8E-29 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 XDD1_0891 3110c693eace18d85c843a90c1959774 276 Gene3D G3DSA:3.10.129.90 3 275 2.9E-101 T 15-10-2018 XDD1_0891 3110c693eace18d85c843a90c1959774 276 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 5 273 7.3E-95 T 15-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 XDD1_0891 3110c693eace18d85c843a90c1959774 276 SUPERFAMILY SSF54637 107 274 1.25E-53 T 15-10-2018 IPR029069 HotDog domain superfamily XDD1_0891 3110c693eace18d85c843a90c1959774 276 Pfam PF13622 Thioesterase-like superfamily 24 272 4.7E-57 T 15-10-2018 XDD1_0891 3110c693eace18d85c843a90c1959774 276 SUPERFAMILY SSF54637 4 105 5.48E-38 T 15-10-2018 IPR029069 HotDog domain superfamily XDD1_3140 91456d04950c48322b4fd1d32355d814 308 Hamap MF_01418 Agmatinase [speB]. 3 306 66.665 T 15-10-2018 IPR023694 Agmatinase GO:0008783|GO:0009446|GO:0030145 KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305 XDD1_3140 91456d04950c48322b4fd1d32355d814 308 PIRSF PIRSF036979 16 306 6.7E-98 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 XDD1_3140 91456d04950c48322b4fd1d32355d814 308 Gene3D G3DSA:3.40.800.10 2 307 1.4E-101 T 15-10-2018 XDD1_3140 91456d04950c48322b4fd1d32355d814 308 TIGRFAM TIGR01230 agmatinase: agmatinase 25 300 1.6E-104 T 15-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 XDD1_3140 91456d04950c48322b4fd1d32355d814 308 Pfam PF00491 Arginase family 36 298 7.7E-87 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 XDD1_3140 91456d04950c48322b4fd1d32355d814 308 ProSitePatterns PS01053 Arginase family signature. 230 251 - T 15-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 XDD1_3140 91456d04950c48322b4fd1d32355d814 308 SUPERFAMILY SSF52768 16 303 9.54E-92 T 15-10-2018 IPR023696 Ureohydrolase domain superfamily XDD1_2347 54e632076ebc0c63bac3e01b280a9130 184 SUPERFAMILY SSF49401 29 184 4.72E-27 T 15-10-2018 IPR008966 Adhesion domain superfamily XDD1_2347 54e632076ebc0c63bac3e01b280a9130 184 Pfam PF00419 Fimbrial protein 30 183 4.0E-18 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 XDD1_2347 54e632076ebc0c63bac3e01b280a9130 184 Gene3D G3DSA:2.60.40.1090 28 183 5.4E-33 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 XDD1_1124 ac7427aeef1e38c324d97ce11921ec53 318 Gene3D G3DSA:1.10.150.130 17 123 2.8E-9 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal XDD1_1124 ac7427aeef1e38c324d97ce11921ec53 318 Pfam PF12835 Integrase 126 274 5.5E-59 T 15-10-2018 IPR024456 Integrase catalytic domain, putative XDD1_1124 ac7427aeef1e38c324d97ce11921ec53 318 Pfam PF12834 Phage integrase, N-terminal 28 113 1.4E-24 T 15-10-2018 IPR024457 Putative integrase, N-terminal XDD1_1124 ac7427aeef1e38c324d97ce11921ec53 318 SUPERFAMILY SSF56349 27 301 5.0E-16 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XDD1_1124 ac7427aeef1e38c324d97ce11921ec53 318 Gene3D G3DSA:1.10.443.10 137 316 2.7E-6 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XDD1_1457 f052f9d3fd7d6ab53452fb52c61ce7db 113 Pfam PF11990 Protein of unknown function (DUF3487) 2 47 1.4E-10 T 15-10-2018 IPR021877 Protein of unknown function DUF3487 XDD1_3561 845d7abcdc9088ef3cb97f957145e6d8 293 Gene3D G3DSA:3.40.50.150 101 293 1.9E-56 T 15-10-2018 XDD1_3561 845d7abcdc9088ef3cb97f957145e6d8 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 8.8E-102 T 15-10-2018 XDD1_3561 845d7abcdc9088ef3cb97f957145e6d8 293 SUPERFAMILY SSF53335 44 290 3.96E-42 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_3561 845d7abcdc9088ef3cb97f957145e6d8 293 PIRSF PIRSF000401 1 293 1.6E-94 T 15-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 XDD1_3561 845d7abcdc9088ef3cb97f957145e6d8 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 1.2E-116 T 15-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 XDD1_3561 845d7abcdc9088ef3cb97f957145e6d8 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 32.579 T 15-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 XDD1_3500 8056d4a1282077b0fbccedf0a938e3c5 87 Pfam PF05488 PAAR motif 10 79 1.4E-20 T 15-10-2018 IPR008727 PAAR motif XDD1_3500 8056d4a1282077b0fbccedf0a938e3c5 87 Gene3D G3DSA:2.60.200.60 18 86 4.9E-6 T 15-10-2018 XDD1_2864 eb005699f5ca4813ffb622b33facfc7f 73 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 31 64 8.5E-10 T 15-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 XDD1_2864 eb005699f5ca4813ffb622b33facfc7f 73 SUPERFAMILY SSF57716 35 71 3.71E-5 T 15-10-2018 XDD1_2864 eb005699f5ca4813ffb622b33facfc7f 73 Gene3D G3DSA:1.20.120.910 2 70 1.1E-13 T 15-10-2018 XDD1_3451 eb005699f5ca4813ffb622b33facfc7f 73 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 31 64 8.5E-10 T 15-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 XDD1_3451 eb005699f5ca4813ffb622b33facfc7f 73 SUPERFAMILY SSF57716 35 71 3.71E-5 T 15-10-2018 XDD1_3451 eb005699f5ca4813ffb622b33facfc7f 73 Gene3D G3DSA:1.20.120.910 2 70 1.1E-13 T 15-10-2018 XDD1_1348 ea970f8f17590c31f47acec91113fda2 38 Pfam PF08173 Membrane bound YbgT-like protein 1 27 2.7E-15 T 15-10-2018 IPR012994 Membrane bound YbgT-like XDD1_1348 ea970f8f17590c31f47acec91113fda2 38 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 2.8E-19 T 15-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 XDD1_2601 a0eb548e7df2b64265370c27ec7c66c1 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 145 165 2.1E-5 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_2601 a0eb548e7df2b64265370c27ec7c66c1 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 2.1E-5 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_2601 a0eb548e7df2b64265370c27ec7c66c1 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 2.1E-5 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_2601 a0eb548e7df2b64265370c27ec7c66c1 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 127 143 2.1E-5 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_2601 a0eb548e7df2b64265370c27ec7c66c1 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 116 183 4.6E-14 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_2601 a0eb548e7df2b64265370c27ec7c66c1 219 SUPERFAMILY SSF56784 6 205 3.03E-43 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_2601 a0eb548e7df2b64265370c27ec7c66c1 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 183 6.9E-25 T 15-10-2018 XDD1_2601 a0eb548e7df2b64265370c27ec7c66c1 219 Gene3D G3DSA:3.40.50.1000 7 205 1.4E-56 T 15-10-2018 IPR023214 HAD superfamily XDD1_2601 a0eb548e7df2b64265370c27ec7c66c1 219 Gene3D G3DSA:1.10.150.240 20 82 1.4E-56 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 XDD1_3681 6bd39ec969b5c5d86554ca710cdd093d 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XDD1_3681 6bd39ec969b5c5d86554ca710cdd093d 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 4.6E-112 T 15-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 XDD1_3681 6bd39ec969b5c5d86554ca710cdd093d 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.361 T 15-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 XDD1_3681 6bd39ec969b5c5d86554ca710cdd093d 280 SUPERFAMILY SSF53335 9 279 4.73E-97 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_3681 6bd39ec969b5c5d86554ca710cdd093d 280 Gene3D G3DSA:3.40.50.150 1 280 1.4E-119 T 15-10-2018 XDD1_2217 ae0e3bc3f58176fa5533a288eea6e926 334 SUPERFAMILY SSF52418 70 328 1.96E-89 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 XDD1_2217 ae0e3bc3f58176fa5533a288eea6e926 334 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 63 1.4E-14 T 15-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 XDD1_2217 ae0e3bc3f58176fa5533a288eea6e926 334 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 329 5.8E-126 T 15-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 XDD1_2217 ae0e3bc3f58176fa5533a288eea6e926 334 Gene3D G3DSA:3.40.1030.10 67 321 2.5E-121 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 XDD1_2217 ae0e3bc3f58176fa5533a288eea6e926 334 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 38.294 T 15-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 XDD1_2217 ae0e3bc3f58176fa5533a288eea6e926 334 Pfam PF00591 Glycosyl transferase family, a/b domain 73 322 1.2E-97 T 15-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 XDD1_2217 ae0e3bc3f58176fa5533a288eea6e926 334 SUPERFAMILY SSF47648 2 67 7.06E-16 T 15-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 XDD1_2217 ae0e3bc3f58176fa5533a288eea6e926 334 Gene3D G3DSA:1.20.970.10 11 183 2.5E-121 T 15-10-2018 XDD1_3316 c1c4737c3296878e0cc227c85fb70f89 183 Pfam PF07348 Syd protein (SUKH-2) 7 179 5.4E-68 T 15-10-2018 IPR009948 Syd GO:0009898 XDD1_3316 c1c4737c3296878e0cc227c85fb70f89 183 Gene3D G3DSA:3.40.1580.20 1 181 1.7E-63 T 15-10-2018 IPR038228 Syd superfamily XDD1_3316 c1c4737c3296878e0cc227c85fb70f89 183 Hamap MF_01104 Protein Syd [syd]. 3 181 33.822 T 15-10-2018 IPR009948 Syd GO:0009898 XDD1_2588 d2470aaf86319376dec508707d300d84 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 7 163 26.871 T 15-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2588 d2470aaf86319376dec508707d300d84 180 Gene3D G3DSA:3.30.70.3270 33 175 8.0E-43 T 15-10-2018 XDD1_2588 d2470aaf86319376dec508707d300d84 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XDD1_2588 d2470aaf86319376dec508707d300d84 180 SUPERFAMILY SSF54862 33 153 4.18E-29 T 15-10-2018 XDD1_2588 d2470aaf86319376dec508707d300d84 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 1.5E-11 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XDD1_2588 d2470aaf86319376dec508707d300d84 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 2.8E-51 T 15-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2132 ce73343fbb2c2ab40c291f39ecd4dd06 647 SUPERFAMILY SSF53383 25 619 3.39E-73 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_2132 ce73343fbb2c2ab40c291f39ecd4dd06 647 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 221 339 2.9E-13 T 15-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 XDD1_2132 ce73343fbb2c2ab40c291f39ecd4dd06 647 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 376 501 1.3E-6 T 15-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 XDD1_2132 ce73343fbb2c2ab40c291f39ecd4dd06 647 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 390 411 - T 15-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 XDD1_2950 d0b8fa37ade1454c6d6cecca7895b773 1082 Pfam PF04851 Type III restriction enzyme, res subunit 311 472 1.1E-13 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XDD1_2950 d0b8fa37ade1454c6d6cecca7895b773 1082 SMART SM00487 307 542 6.4E-12 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XDD1_2950 d0b8fa37ade1454c6d6cecca7895b773 1082 Gene3D G3DSA:3.40.50.300 542 771 3.2E-20 T 15-10-2018 XDD1_2950 d0b8fa37ade1454c6d6cecca7895b773 1082 SUPERFAMILY SSF52540 279 571 2.17E-21 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2950 d0b8fa37ade1454c6d6cecca7895b773 1082 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 129 201 6.8E-10 T 15-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 XDD1_2950 d0b8fa37ade1454c6d6cecca7895b773 1082 Gene3D G3DSA:3.40.50.300 311 523 6.1E-23 T 15-10-2018 XDD1_2950 d0b8fa37ade1454c6d6cecca7895b773 1082 Gene3D G3DSA:3.90.1570.50 123 205 9.8E-6 T 15-10-2018 XDD1_0644 2db845d1951dea36f28749ceff4efafc 474 Pfam PF10415 Fumarase C C-terminus 411 462 7.5E-17 T 15-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XDD1_0644 2db845d1951dea36f28749ceff4efafc 474 Gene3D G3DSA:1.10.275.10 6 142 4.2E-58 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal XDD1_0644 2db845d1951dea36f28749ceff4efafc 474 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 2.4E-28 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_0644 2db845d1951dea36f28749ceff4efafc 474 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 2.4E-28 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_0644 2db845d1951dea36f28749ceff4efafc 474 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 2.4E-28 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_0644 2db845d1951dea36f28749ceff4efafc 474 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 2.4E-28 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_0644 2db845d1951dea36f28749ceff4efafc 474 Pfam PF00206 Lyase 13 345 2.5E-108 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal XDD1_0644 2db845d1951dea36f28749ceff4efafc 474 Gene3D G3DSA:1.10.40.30 411 460 9.7E-30 T 15-10-2018 XDD1_0644 2db845d1951dea36f28749ceff4efafc 474 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 473 1.2E-261 T 15-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 XDD1_0644 2db845d1951dea36f28749ceff4efafc 474 SUPERFAMILY SSF48557 2 458 2.21E-141 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 XDD1_0644 2db845d1951dea36f28749ceff4efafc 474 Gene3D G3DSA:1.20.200.10 143 410 5.0E-113 T 15-10-2018 XDD1_0644 2db845d1951dea36f28749ceff4efafc 474 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 XDD1_0644 2db845d1951dea36f28749ceff4efafc 474 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 1.3E-5 T 15-10-2018 XDD1_0644 2db845d1951dea36f28749ceff4efafc 474 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 1.3E-5 T 15-10-2018 XDD1_0644 2db845d1951dea36f28749ceff4efafc 474 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 1.3E-5 T 15-10-2018 XDD1_3482 194b76da668cf05b724b271a0b94b934 414 Pfam PF00375 Sodium:dicarboxylate symporter family 17 396 1.4E-64 T 15-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 XDD1_3482 194b76da668cf05b724b271a0b94b934 414 PRINTS PR00173 Glutamate-aspartate symporter signature 17 37 9.1E-16 T 15-10-2018 XDD1_3482 194b76da668cf05b724b271a0b94b934 414 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 9.1E-16 T 15-10-2018 XDD1_3482 194b76da668cf05b724b271a0b94b934 414 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 9.1E-16 T 15-10-2018 XDD1_3482 194b76da668cf05b724b271a0b94b934 414 PRINTS PR00173 Glutamate-aspartate symporter signature 324 343 9.1E-16 T 15-10-2018 XDD1_3482 194b76da668cf05b724b271a0b94b934 414 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 9.1E-16 T 15-10-2018 XDD1_3482 194b76da668cf05b724b271a0b94b934 414 PRINTS PR00173 Glutamate-aspartate symporter signature 351 371 9.1E-16 T 15-10-2018 XDD1_3482 194b76da668cf05b724b271a0b94b934 414 Gene3D G3DSA:1.10.3860.10 7 405 1.4E-72 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XDD1_3482 194b76da668cf05b724b271a0b94b934 414 SUPERFAMILY SSF118215 17 399 5.75E-95 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XDD1_3482 194b76da668cf05b724b271a0b94b934 414 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 5 406 35.65 T 15-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 XDD1_2460 a84e2e034b0332ad3c172f4da3609bde 114 SUPERFAMILY SSF160113 56 109 9.81E-13 T 15-10-2018 IPR036913 YegP-like superfamily XDD1_2460 a84e2e034b0332ad3c172f4da3609bde 114 Pfam PF07411 Domain of unknown function (DUF1508) 12 58 3.7E-17 T 15-10-2018 IPR010879 Domain of unknown function DUF1508 XDD1_2460 a84e2e034b0332ad3c172f4da3609bde 114 Pfam PF07411 Domain of unknown function (DUF1508) 63 109 1.2E-15 T 15-10-2018 IPR010879 Domain of unknown function DUF1508 XDD1_2460 a84e2e034b0332ad3c172f4da3609bde 114 Gene3D G3DSA:2.30.29.80 2 114 4.6E-38 T 15-10-2018 XDD1_2460 a84e2e034b0332ad3c172f4da3609bde 114 SUPERFAMILY SSF160113 4 58 1.15E-14 T 15-10-2018 IPR036913 YegP-like superfamily XDD1_2235 7011f0dfd22a2bc2a96ff02436bdb5a6 546 Gene3D G3DSA:3.90.76.10 72 195 6.5E-188 T 15-10-2018 XDD1_2235 7011f0dfd22a2bc2a96ff02436bdb5a6 546 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 464 9.0E-84 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain XDD1_2235 7011f0dfd22a2bc2a96ff02436bdb5a6 546 PIRSF PIRSF002741 1 545 3.0E-106 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 XDD1_2235 7011f0dfd22a2bc2a96ff02436bdb5a6 546 SUPERFAMILY SSF53850 37 526 3.08E-138 T 15-10-2018 XDD1_2235 7011f0dfd22a2bc2a96ff02436bdb5a6 546 Gene3D G3DSA:3.10.105.10 298 513 6.5E-188 T 15-10-2018 XDD1_2235 7011f0dfd22a2bc2a96ff02436bdb5a6 546 Gene3D G3DSA:3.40.190.10 43 524 6.5E-188 T 15-10-2018 XDD1_1020 620de02b6f366bd45442576320f43a96 267 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 103 263 5.0E-6 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 XDD1_1020 620de02b6f366bd45442576320f43a96 267 Gene3D G3DSA:3.90.850.10 1 267 1.2E-80 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 XDD1_1020 620de02b6f366bd45442576320f43a96 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 266 1.1E-137 T 15-10-2018 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase GO:0018817|GO:0019439 XDD1_1020 620de02b6f366bd45442576320f43a96 267 SUPERFAMILY SSF56529 2 266 1.98E-76 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 XDD1_2679 69c8f580d483e3bf2caaeceaaefd9436 225 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 192 5.0E-30 T 15-10-2018 XDD1_2679 69c8f580d483e3bf2caaeceaaefd9436 225 SUPERFAMILY SSF56784 5 203 9.05E-19 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_2679 69c8f580d483e3bf2caaeceaaefd9436 225 Gene3D G3DSA:3.40.50.1000 6 202 5.0E-46 T 15-10-2018 IPR023214 HAD superfamily XDD1_2679 69c8f580d483e3bf2caaeceaaefd9436 225 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 194 1.1E-20 T 15-10-2018 XDD1_2679 69c8f580d483e3bf2caaeceaaefd9436 225 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 201 1.3E-36 T 15-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like XDD1_2679 69c8f580d483e3bf2caaeceaaefd9436 225 Gene3D G3DSA:1.20.1440.100 16 92 5.0E-46 T 15-10-2018 XDD1_0330 fde3b45018894a625ff9298ccfb4d2f1 85 SUPERFAMILY SSF55021 3 75 2.29E-11 T 15-10-2018 XDD1_0330 fde3b45018894a625ff9298ccfb4d2f1 85 Gene3D G3DSA:3.30.70.260 2 85 5.8E-9 T 15-10-2018 XDD1_0330 fde3b45018894a625ff9298ccfb4d2f1 85 Pfam PF13710 ACT domain 13 73 6.5E-26 T 15-10-2018 XDD1_2127 b75d0b4f2c1d7c0727e04ba13ae36643 230 Gene3D G3DSA:3.75.10.10 1 214 5.1E-60 T 15-10-2018 XDD1_2127 b75d0b4f2c1d7c0727e04ba13ae36643 230 SUPERFAMILY SSF55909 2 198 2.5E-50 T 15-10-2018 XDD1_3472 9c5f22327a2b98cbbdd578e5901ab458 391 Gene3D G3DSA:3.40.47.10 1 237 9.3E-30 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_3472 9c5f22327a2b98cbbdd578e5901ab458 391 Gene3D G3DSA:3.40.47.10 241 387 2.6E-39 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_3472 9c5f22327a2b98cbbdd578e5901ab458 391 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 92 232 1.3E-17 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XDD1_3472 9c5f22327a2b98cbbdd578e5901ab458 391 SUPERFAMILY SSF53901 207 389 3.52E-43 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_3472 9c5f22327a2b98cbbdd578e5901ab458 391 SMART SM00825 Beta-ketoacyl synthase 2 389 1.0E-7 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XDD1_3472 9c5f22327a2b98cbbdd578e5901ab458 391 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 150 166 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site XDD1_3472 9c5f22327a2b98cbbdd578e5901ab458 391 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 239 338 2.3E-25 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal XDD1_3472 9c5f22327a2b98cbbdd578e5901ab458 391 SUPERFAMILY SSF53901 2 233 6.01E-34 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_0638 f3d8e7b3d62c0a1954236f21044ace81 302 SUPERFAMILY SSF103481 44 146 1.31E-11 T 15-10-2018 XDD1_0638 f3d8e7b3d62c0a1954236f21044ace81 302 SUPERFAMILY SSF103481 192 297 4.18E-10 T 15-10-2018 XDD1_0638 f3d8e7b3d62c0a1954236f21044ace81 302 Pfam PF00892 EamA-like transporter family 11 143 1.0E-19 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_0638 f3d8e7b3d62c0a1954236f21044ace81 302 Pfam PF00892 EamA-like transporter family 158 294 2.9E-18 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_2734 cbe7e6368964a85c58550e3f9a5b6846 288 Gene3D G3DSA:1.10.3720.10 27 285 8.6E-62 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_2734 cbe7e6368964a85c58550e3f9a5b6846 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 274 5.4E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_2734 cbe7e6368964a85c58550e3f9a5b6846 288 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 26 282 1.7E-116 T 15-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 XDD1_2734 cbe7e6368964a85c58550e3f9a5b6846 288 SUPERFAMILY SSF161098 23 274 9.81E-54 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_2734 cbe7e6368964a85c58550e3f9a5b6846 288 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 18 281 9.5E-109 T 15-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 XDD1_1682 84bfed0d9fd2a9647a2df363a84a6f61 785 Pfam PF08273 Zinc-binding domain of primase-helicase 50 89 4.0E-10 T 15-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 XDD1_1682 84bfed0d9fd2a9647a2df363a84a6f61 785 SUPERFAMILY SSF46785 704 785 5.71E-29 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1682 84bfed0d9fd2a9647a2df363a84a6f61 785 SMART SM00885 369 495 1.3E-14 T 15-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XDD1_1682 84bfed0d9fd2a9647a2df363a84a6f61 785 SMART SM00778 50 89 4.8E-11 T 15-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 XDD1_1682 84bfed0d9fd2a9647a2df363a84a6f61 785 Gene3D G3DSA:3.40.1360.10 208 333 4.2E-5 T 15-10-2018 XDD1_1682 84bfed0d9fd2a9647a2df363a84a6f61 785 SUPERFAMILY SSF57783 49 119 1.36E-9 T 15-10-2018 XDD1_1682 84bfed0d9fd2a9647a2df363a84a6f61 785 Pfam PF03288 Poxvirus D5 protein-like 703 784 1.3E-14 T 15-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal XDD1_1682 84bfed0d9fd2a9647a2df363a84a6f61 785 Pfam PF13362 Toprim domain 218 323 4.2E-11 T 15-10-2018 IPR006171 TOPRIM domain XDD1_1682 84bfed0d9fd2a9647a2df363a84a6f61 785 Gene3D G3DSA:1.10.10.10 703 785 1.9E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1682 84bfed0d9fd2a9647a2df363a84a6f61 785 Gene3D G3DSA:3.40.50.300 490 666 3.0E-7 T 15-10-2018 XDD1_1682 84bfed0d9fd2a9647a2df363a84a6f61 785 SUPERFAMILY SSF52540 512 670 5.04E-10 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1682 84bfed0d9fd2a9647a2df363a84a6f61 785 Pfam PF08706 D5 N terminal like 370 497 5.2E-9 T 15-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XDD1_3307 f0aa9bbaaeb3ca7d5e394ebef33a1a1d 265 Pfam PF00557 Metallopeptidase family M24 13 242 8.8E-52 T 15-10-2018 IPR000994 Peptidase M24 XDD1_3307 f0aa9bbaaeb3ca7d5e394ebef33a1a1d 265 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 XDD1_3307 f0aa9bbaaeb3ca7d5e394ebef33a1a1d 265 SUPERFAMILY SSF55920 3 259 4.19E-89 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like XDD1_3307 f0aa9bbaaeb3ca7d5e394ebef33a1a1d 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 5.9E-21 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XDD1_3307 f0aa9bbaaeb3ca7d5e394ebef33a1a1d 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 5.9E-21 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XDD1_3307 f0aa9bbaaeb3ca7d5e394ebef33a1a1d 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 5.9E-21 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XDD1_3307 f0aa9bbaaeb3ca7d5e394ebef33a1a1d 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 5.9E-21 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XDD1_3307 f0aa9bbaaeb3ca7d5e394ebef33a1a1d 265 Gene3D G3DSA:3.90.230.10 2 262 1.9E-112 T 15-10-2018 XDD1_3307 f0aa9bbaaeb3ca7d5e394ebef33a1a1d 265 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 249 8.6E-104 T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 XDD1_3307 f0aa9bbaaeb3ca7d5e394ebef33a1a1d 265 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 41.874 T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 XDD1_0960 d9fac95e1050274a66836f99b93718eb 221 Pfam PF05593 RHS Repeat 57 94 1.7E-6 T 15-10-2018 IPR031325 RHS repeat XDD1_0960 d9fac95e1050274a66836f99b93718eb 221 Pfam PF05593 RHS Repeat 79 114 1.4E-5 T 15-10-2018 IPR031325 RHS repeat XDD1_0960 d9fac95e1050274a66836f99b93718eb 221 Gene3D G3DSA:2.180.10.10 87 214 4.1E-6 T 15-10-2018 XDD1_0960 d9fac95e1050274a66836f99b93718eb 221 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 39 76 7.5E-4 T 15-10-2018 IPR006530 YD repeat XDD1_0960 d9fac95e1050274a66836f99b93718eb 221 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 149 189 1.4E-4 T 15-10-2018 IPR006530 YD repeat XDD1_0960 d9fac95e1050274a66836f99b93718eb 221 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 79 119 7.1E-7 T 15-10-2018 IPR006530 YD repeat XDD1_3128 200695686398771a722ee09775a639f8 545 Pfam PF06418 CTP synthase N-terminus 5 266 1.3E-127 T 15-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 XDD1_3128 200695686398771a722ee09775a639f8 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.249 T 15-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 XDD1_3128 200695686398771a722ee09775a639f8 545 Gene3D G3DSA:3.40.50.880 286 544 2.3E-102 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_3128 200695686398771a722ee09775a639f8 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 4.4E-60 T 15-10-2018 IPR017926 Glutamine amidotransferase XDD1_3128 200695686398771a722ee09775a639f8 545 SUPERFAMILY SSF52540 3 269 5.02E-124 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3128 200695686398771a722ee09775a639f8 545 Gene3D G3DSA:3.40.50.300 1 285 3.1E-137 T 15-10-2018 XDD1_3128 200695686398771a722ee09775a639f8 545 SUPERFAMILY SSF52317 289 541 7.18E-87 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like XDD1_3128 200695686398771a722ee09775a639f8 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 4.1E-264 T 15-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 XDD1_0357 73e2952d7c623b957e4e20477b97d604 245 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 64 230 3.5E-54 T 15-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 XDD1_0357 73e2952d7c623b957e4e20477b97d604 245 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 60 236 2.7E-73 T 15-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 XDD1_0357 73e2952d7c623b957e4e20477b97d604 245 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 245 56.902 T 15-10-2018 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 XDD1_0793 25a536a8701e5a13ed70101d3913c605 325 Gene3D G3DSA:3.30.70.2020 38 320 1.9E-110 T 15-10-2018 XDD1_0793 25a536a8701e5a13ed70101d3913c605 325 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 113 283 4.8E-23 T 15-10-2018 XDD1_0793 25a536a8701e5a13ed70101d3913c605 325 Gene3D G3DSA:1.10.150.210 121 183 1.9E-110 T 15-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 XDD1_0793 25a536a8701e5a13ed70101d3913c605 325 Gene3D G3DSA:3.40.50.1000 107 316 1.9E-110 T 15-10-2018 IPR023214 HAD superfamily XDD1_0793 25a536a8701e5a13ed70101d3913c605 325 Pfam PF12710 haloacid dehalogenase-like hydrolase 145 282 7.8E-15 T 15-10-2018 XDD1_0793 25a536a8701e5a13ed70101d3913c605 325 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 99 316 1.9E-85 T 15-10-2018 XDD1_0793 25a536a8701e5a13ed70101d3913c605 325 SUPERFAMILY SSF56784 113 317 1.0E-47 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_1000 8504905c60c0e090923ab91991fbf748 433 PIRSF PIRSF000521 173 432 1.2E-19 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_1000 8504905c60c0e090923ab91991fbf748 433 PIRSF PIRSF000521 11 137 6.1E-5 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_1000 8504905c60c0e090923ab91991fbf748 433 SUPERFAMILY SSF53383 4 430 5.93E-85 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_1000 8504905c60c0e090923ab91991fbf748 433 Pfam PF00202 Aminotransferase class-III 17 428 6.7E-75 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_1000 8504905c60c0e090923ab91991fbf748 433 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 241 278 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_1000 8504905c60c0e090923ab91991fbf748 433 Gene3D G3DSA:3.90.1150.10 20 425 2.9E-101 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_1000 8504905c60c0e090923ab91991fbf748 433 Gene3D G3DSA:3.40.640.10 49 328 2.9E-101 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_2048 13f3ab2cc25eca98df15942877943dc2 867 SUPERFAMILY SSF141571 649 735 3.22E-11 T 15-10-2018 XDD1_2048 13f3ab2cc25eca98df15942877943dc2 867 Gene3D G3DSA:2.160.20.100 790 854 8.6E-8 T 15-10-2018 XDD1_2048 13f3ab2cc25eca98df15942877943dc2 867 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 21 307 1.9E-85 T 15-10-2018 IPR018683 Domain of unknown function DUF2169 XDD1_2048 13f3ab2cc25eca98df15942877943dc2 867 SUPERFAMILY SSF141571 539 678 1.33E-25 T 15-10-2018 XDD1_2048 13f3ab2cc25eca98df15942877943dc2 867 Pfam PF13599 Pentapeptide repeats (9 copies) 551 616 6.5E-8 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_2048 13f3ab2cc25eca98df15942877943dc2 867 Pfam PF13599 Pentapeptide repeats (9 copies) 670 744 1.6E-10 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_2048 13f3ab2cc25eca98df15942877943dc2 867 Gene3D G3DSA:2.160.20.100 656 789 6.8E-22 T 15-10-2018 XDD1_2048 13f3ab2cc25eca98df15942877943dc2 867 SUPERFAMILY SSF141571 736 845 1.05E-19 T 15-10-2018 XDD1_2048 13f3ab2cc25eca98df15942877943dc2 867 Pfam PF00805 Pentapeptide repeats (8 copies) 805 844 1.0E-6 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_2048 13f3ab2cc25eca98df15942877943dc2 867 Pfam PF00805 Pentapeptide repeats (8 copies) 765 804 0.0063 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_2048 13f3ab2cc25eca98df15942877943dc2 867 Gene3D G3DSA:2.160.20.80 482 655 1.4E-21 T 15-10-2018 XDD1_2325 8043edfa3fd914fe42cfe66d0ed580b1 226 Pfam PF12840 Helix-turn-helix domain 12 71 1.9E-8 T 15-10-2018 XDD1_2325 8043edfa3fd914fe42cfe66d0ed580b1 226 SUPERFAMILY SSF46785 8 121 1.61E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_2325 8043edfa3fd914fe42cfe66d0ed580b1 226 SMART SM00418 12 91 1.9E-13 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XDD1_2325 8043edfa3fd914fe42cfe66d0ed580b1 226 Gene3D G3DSA:1.10.10.10 1 95 3.6E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0473 fea1de3312ecad8479d36130b03d8f1b 281 SUPERFAMILY SSF51717 6 276 1.83E-109 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XDD1_0473 fea1de3312ecad8479d36130b03d8f1b 281 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 270 3.1E-107 T 15-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 XDD1_0473 fea1de3312ecad8479d36130b03d8f1b 281 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XDD1_0473 fea1de3312ecad8479d36130b03d8f1b 281 Pfam PF00809 Pterin binding enzyme 18 257 1.8E-91 T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XDD1_0473 fea1de3312ecad8479d36130b03d8f1b 281 Gene3D G3DSA:3.20.20.20 1 279 1.5E-115 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XDD1_0473 fea1de3312ecad8479d36130b03d8f1b 281 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XDD1_3461 6d2761922adce34b8d100ce8c52c854c 263 Pfam PF01553 Acyltransferase 83 198 2.5E-14 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XDD1_3461 6d2761922adce34b8d100ce8c52c854c 263 SUPERFAMILY SSF69593 38 251 2.75E-26 T 15-10-2018 XDD1_3461 6d2761922adce34b8d100ce8c52c854c 263 SMART SM00563 95 205 1.3E-15 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XDD1_1852 62f0c003d5b741b23eef0f998c7cac75 214 Pfam PF00677 Lumazine binding domain 100 185 3.3E-21 T 15-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XDD1_1852 62f0c003d5b741b23eef0f998c7cac75 214 Pfam PF00677 Lumazine binding domain 3 87 3.6E-20 T 15-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XDD1_1852 62f0c003d5b741b23eef0f998c7cac75 214 Gene3D G3DSA:2.40.30.20 1 89 1.6E-30 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XDD1_1852 62f0c003d5b741b23eef0f998c7cac75 214 Gene3D G3DSA:2.40.30.20 94 206 2.1E-27 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XDD1_1852 62f0c003d5b741b23eef0f998c7cac75 214 SUPERFAMILY SSF63380 1 93 2.13E-26 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XDD1_1852 62f0c003d5b741b23eef0f998c7cac75 214 PIRSF PIRSF000498 1 212 9.2E-73 T 15-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XDD1_1852 62f0c003d5b741b23eef0f998c7cac75 214 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 205 2.7E-80 T 15-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XDD1_1852 62f0c003d5b741b23eef0f998c7cac75 214 SUPERFAMILY SSF63380 93 199 9.35E-31 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XDD1_2793 f43e0f69f17ec2ad17fa75712c7995e3 398 Pfam PF00175 Oxidoreductase NAD-binding domain 264 372 2.7E-15 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 XDD1_2793 f43e0f69f17ec2ad17fa75712c7995e3 398 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 1.0E-7 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 XDD1_2793 f43e0f69f17ec2ad17fa75712c7995e3 398 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 1.0E-7 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 XDD1_2793 f43e0f69f17ec2ad17fa75712c7995e3 398 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 1.0E-7 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 XDD1_2793 f43e0f69f17ec2ad17fa75712c7995e3 398 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 1.0E-7 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 XDD1_2793 f43e0f69f17ec2ad17fa75712c7995e3 398 Pfam PF00970 Oxidoreductase FAD-binding domain 156 252 1.7E-10 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 XDD1_2793 f43e0f69f17ec2ad17fa75712c7995e3 398 Gene3D G3DSA:3.40.50.80 255 396 1.6E-33 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XDD1_2793 f43e0f69f17ec2ad17fa75712c7995e3 398 Gene3D G3DSA:1.10.490.10 1 142 6.7E-50 T 15-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 XDD1_2793 f43e0f69f17ec2ad17fa75712c7995e3 398 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 5.6E-6 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_2793 f43e0f69f17ec2ad17fa75712c7995e3 398 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 5.6E-6 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_2793 f43e0f69f17ec2ad17fa75712c7995e3 398 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 358 366 5.6E-6 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_2793 f43e0f69f17ec2ad17fa75712c7995e3 398 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 5.6E-6 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XDD1_2793 f43e0f69f17ec2ad17fa75712c7995e3 398 SUPERFAMILY SSF46458 1 139 8.65E-39 T 15-10-2018 IPR009050 Globin-like superfamily XDD1_2793 f43e0f69f17ec2ad17fa75712c7995e3 398 Pfam PF00042 Globin 8 102 2.6E-13 T 15-10-2018 IPR000971 Globin GO:0020037 XDD1_2793 f43e0f69f17ec2ad17fa75712c7995e3 398 Gene3D G3DSA:2.40.30.10 149 254 4.6E-32 T 15-10-2018 XDD1_2793 f43e0f69f17ec2ad17fa75712c7995e3 398 SUPERFAMILY SSF52343 254 394 9.04E-35 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XDD1_2793 f43e0f69f17ec2ad17fa75712c7995e3 398 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 56.095 T 15-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 XDD1_2793 f43e0f69f17ec2ad17fa75712c7995e3 398 SUPERFAMILY SSF63380 148 253 6.3E-28 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XDD1_1912 dd2e0e011363a13024c5b6201751f6fe 299 SUPERFAMILY SSF46785 3 112 1.68E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1912 dd2e0e011363a13024c5b6201751f6fe 299 Gene3D G3DSA:3.40.190.10 164 264 4.7E-58 T 15-10-2018 XDD1_1912 dd2e0e011363a13024c5b6201751f6fe 299 Gene3D G3DSA:1.10.10.10 1 86 1.1E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1912 dd2e0e011363a13024c5b6201751f6fe 299 Pfam PF03466 LysR substrate binding domain 91 292 1.2E-37 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_1912 dd2e0e011363a13024c5b6201751f6fe 299 SUPERFAMILY SSF53850 91 297 2.35E-40 T 15-10-2018 XDD1_1912 dd2e0e011363a13024c5b6201751f6fe 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 9.9E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_1912 dd2e0e011363a13024c5b6201751f6fe 299 Gene3D G3DSA:3.40.190.10 92 290 4.7E-58 T 15-10-2018 XDD1_1255 f31bfa099da95c9f998382f50cb28679 382 Gene3D G3DSA:1.10.3720.10 135 324 6.2E-37 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_1255 f31bfa099da95c9f998382f50cb28679 382 SUPERFAMILY SSF161098 137 319 4.58E-43 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_1255 f31bfa099da95c9f998382f50cb28679 382 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 315 1.4E-27 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_0430 3ae41fc5d3cd2b92090db99f2dfec275 248 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.225 T 15-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB XDD1_0430 3ae41fc5d3cd2b92090db99f2dfec275 248 SUPERFAMILY SSF75217 78 243 1.44E-49 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases XDD1_0430 3ae41fc5d3cd2b92090db99f2dfec275 248 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 4 77 3.9E-21 T 15-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 XDD1_0430 3ae41fc5d3cd2b92090db99f2dfec275 248 Pfam PF00588 SpoU rRNA Methylase family 96 236 1.2E-40 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 XDD1_0430 3ae41fc5d3cd2b92090db99f2dfec275 248 Gene3D G3DSA:3.30.1330.30 1 76 1.4E-29 T 15-10-2018 IPR029064 50S ribosomal protein L30e-like XDD1_0430 3ae41fc5d3cd2b92090db99f2dfec275 248 Gene3D G3DSA:3.40.1280.10 77 243 2.3E-66 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XDD1_0430 3ae41fc5d3cd2b92090db99f2dfec275 248 SMART SM00967 4 80 6.6E-22 T 15-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 XDD1_0430 3ae41fc5d3cd2b92090db99f2dfec275 248 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 1.1E-91 T 15-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 XDD1_0430 3ae41fc5d3cd2b92090db99f2dfec275 248 SUPERFAMILY SSF55315 2 76 4.83E-21 T 15-10-2018 IPR029064 50S ribosomal protein L30e-like XDD1_1309 864643edd1ac1eda9a860abc7eb5b2ae 451 Gene3D G3DSA:2.40.50.100 303 339 3.3E-11 T 15-10-2018 XDD1_1309 864643edd1ac1eda9a860abc7eb5b2ae 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 415 430 1.8E-54 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XDD1_1309 864643edd1ac1eda9a860abc7eb5b2ae 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 315 336 1.8E-54 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XDD1_1309 864643edd1ac1eda9a860abc7eb5b2ae 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 46 69 1.8E-54 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XDD1_1309 864643edd1ac1eda9a860abc7eb5b2ae 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 430 450 1.8E-54 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XDD1_1309 864643edd1ac1eda9a860abc7eb5b2ae 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 372 395 1.8E-54 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XDD1_1309 864643edd1ac1eda9a860abc7eb5b2ae 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 88 108 1.8E-54 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XDD1_1309 864643edd1ac1eda9a860abc7eb5b2ae 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 348 372 1.8E-54 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XDD1_1309 864643edd1ac1eda9a860abc7eb5b2ae 451 Gene3D G3DSA:2.40.30.170 340 428 3.3E-11 T 15-10-2018 XDD1_1309 864643edd1ac1eda9a860abc7eb5b2ae 451 Gene3D G3DSA:1.10.287.470 212 295 3.3E-11 T 15-10-2018 XDD1_1309 864643edd1ac1eda9a860abc7eb5b2ae 451 Pfam PF13437 HlyD family secretion protein 302 412 5.9E-19 T 15-10-2018 XDD1_1309 864643edd1ac1eda9a860abc7eb5b2ae 451 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 35 451 4.5E-119 T 15-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 XDD1_3632 1640d018af531d7cdd94b9931923ddf5 706 SUPERFAMILY SSF51445 147 696 1.77E-147 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily XDD1_3632 1640d018af531d7cdd94b9931923ddf5 706 Pfam PF02446 4-alpha-glucanotransferase 153 680 7.1E-134 T 15-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 XDD1_3632 1640d018af531d7cdd94b9931923ddf5 706 Gene3D G3DSA:3.20.20.80 146 701 1.8E-124 T 15-10-2018 XDD1_3632 1640d018af531d7cdd94b9931923ddf5 706 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 103 700 6.1E-224 T 15-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 XDD1_2116 9f18d1fea990ceac36cb0e445f07eb4e 412 Pfam PF13533 Biotin-lipoyl like 61 103 1.5E-11 T 15-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain XDD1_2116 9f18d1fea990ceac36cb0e445f07eb4e 412 Gene3D G3DSA:2.40.30.170 47 350 3.4E-41 T 15-10-2018 XDD1_2116 9f18d1fea990ceac36cb0e445f07eb4e 412 Gene3D G3DSA:2.40.420.20 44 406 3.4E-41 T 15-10-2018 XDD1_2116 9f18d1fea990ceac36cb0e445f07eb4e 412 Pfam PF13437 HlyD family secretion protein 222 340 4.7E-13 T 15-10-2018 XDD1_2116 9f18d1fea990ceac36cb0e445f07eb4e 412 Gene3D G3DSA:1.10.287.470 92 221 3.4E-41 T 15-10-2018 XDD1_2116 9f18d1fea990ceac36cb0e445f07eb4e 412 SUPERFAMILY SSF111369 50 136 4.05E-7 T 15-10-2018 XDD1_2116 9f18d1fea990ceac36cb0e445f07eb4e 412 Gene3D G3DSA:2.40.50.100 58 265 3.4E-41 T 15-10-2018 XDD1_3063 8ff98642457781da40be266f34ae8cfe 349 Gene3D G3DSA:3.30.420.470 133 342 6.5E-8 T 15-10-2018 XDD1_3063 8ff98642457781da40be266f34ae8cfe 349 Pfam PF13592 Winged helix-turn helix 100 155 3.4E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_3063 8ff98642457781da40be266f34ae8cfe 349 SUPERFAMILY SSF53098 224 320 3.29E-5 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3063 8ff98642457781da40be266f34ae8cfe 349 SUPERFAMILY SSF46689 17 131 3.05E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3063 8ff98642457781da40be266f34ae8cfe 349 Pfam PF13358 DDE superfamily endonuclease 169 313 4.1E-31 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_3063 8ff98642457781da40be266f34ae8cfe 349 Pfam PF13551 Winged helix-turn helix 32 88 1.8E-8 T 15-10-2018 XDD1_0889 aad9ae736924ff3e13756f3648f8eab7 112 Gene3D G3DSA:3.30.70.120 1 112 1.5E-43 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal XDD1_0889 aad9ae736924ff3e13756f3648f8eab7 112 PRINTS PR00340 P-II protein signature 83 103 2.1E-38 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XDD1_0889 aad9ae736924ff3e13756f3648f8eab7 112 PRINTS PR00340 P-II protein signature 52 75 2.1E-38 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XDD1_0889 aad9ae736924ff3e13756f3648f8eab7 112 PRINTS PR00340 P-II protein signature 23 41 2.1E-38 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XDD1_0889 aad9ae736924ff3e13756f3648f8eab7 112 PRINTS PR00340 P-II protein signature 2 17 2.1E-38 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XDD1_0889 aad9ae736924ff3e13756f3648f8eab7 112 PIRSF PIRSF039144 1 112 2.0E-51 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XDD1_0889 aad9ae736924ff3e13756f3648f8eab7 112 SMART SM00938 4 105 1.1E-59 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XDD1_0889 aad9ae736924ff3e13756f3648f8eab7 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 6.5E-40 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XDD1_0889 aad9ae736924ff3e13756f3648f8eab7 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 15-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 XDD1_0889 aad9ae736924ff3e13756f3648f8eab7 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 15-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 XDD1_0889 aad9ae736924ff3e13756f3648f8eab7 112 SUPERFAMILY SSF54913 1 112 2.19E-41 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta XDD1_0209 daa337bb64909585f142f267f4c9108a 399 Gene3D G3DSA:1.20.1250.20 3 394 9.5E-28 T 15-10-2018 XDD1_0209 daa337bb64909585f142f267f4c9108a 399 Pfam PF07690 Major Facilitator Superfamily 11 357 5.6E-21 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0209 daa337bb64909585f142f267f4c9108a 399 SUPERFAMILY SSF103473 5 395 1.29E-33 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0209 daa337bb64909585f142f267f4c9108a 399 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 XDD1_1926 612171a8d844174d323a984893eda0b1 132 Pfam PF05656 Protein of unknown function (DUF805) 11 117 4.6E-29 T 15-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 XDD1_3410 49f7d0961b9d3d5c9a8d80e8bcd79a4b 206 Gene3D G3DSA:2.30.30.40 26 83 9.2E-9 T 15-10-2018 XDD1_3410 49f7d0961b9d3d5c9a8d80e8bcd79a4b 206 PIRSF PIRSF006158 1 205 1.1E-60 T 15-10-2018 IPR016476 SH3 domain protein XDD1_3410 49f7d0961b9d3d5c9a8d80e8bcd79a4b 206 SMART SM00287 23 88 9.9E-6 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type XDD1_3410 49f7d0961b9d3d5c9a8d80e8bcd79a4b 206 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 204 5.1E-50 T 15-10-2018 IPR016476 SH3 domain protein XDD1_3410 49f7d0961b9d3d5c9a8d80e8bcd79a4b 206 SUPERFAMILY SSF58100 85 197 2.88E-5 T 15-10-2018 XDD1_3410 49f7d0961b9d3d5c9a8d80e8bcd79a4b 206 Gene3D G3DSA:1.20.5.340 84 169 4.0E-5 T 15-10-2018 XDD1_3410 49f7d0961b9d3d5c9a8d80e8bcd79a4b 206 Pfam PF08239 Bacterial SH3 domain 34 86 4.7E-10 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type XDD1_3245 ca07a30c8caf73282a55c633e45e653b 248 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 153 5.2E-51 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_3245 ca07a30c8caf73282a55c633e45e653b 248 Pfam PF05638 Type VI secretion system effector, Hcp 6 143 6.7E-19 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_3245 ca07a30c8caf73282a55c633e45e653b 248 SUPERFAMILY SSF141452 5 152 1.96E-29 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_3245 ca07a30c8caf73282a55c633e45e653b 248 Gene3D G3DSA:2.30.110.20 3 157 6.5E-46 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_2162 95a93b1cb6fb2ee70566d4ab58b1902e 350 SUPERFAMILY SSF56601 19 332 3.57E-72 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XDD1_2162 95a93b1cb6fb2ee70566d4ab58b1902e 350 Gene3D G3DSA:3.40.710.10 19 340 3.8E-74 T 15-10-2018 XDD1_2162 95a93b1cb6fb2ee70566d4ab58b1902e 350 Pfam PF00144 Beta-lactamase 14 322 8.6E-51 T 15-10-2018 IPR001466 Beta-lactamase-related XDD1_2940 4ea4cd3bff38547bfd67812ceb6d7c23 430 Gene3D G3DSA:1.20.190.10 32 261 6.8E-57 T 15-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 XDD1_2940 4ea4cd3bff38547bfd67812ceb6d7c23 430 SUPERFAMILY SSF56849 39 247 1.31E-31 T 15-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 XDD1_2940 4ea4cd3bff38547bfd67812ceb6d7c23 430 Pfam PF03945 delta endotoxin, N-terminal domain 50 229 8.1E-7 T 15-10-2018 IPR005639 Pesticidal crystal protein, N-terminal GO:0009405|GO:0090729 XDD1_0884 4bb2c29cae78dd9c4852ae682bad1b6b 232 SUPERFAMILY SSF52402 1 214 2.07E-65 T 15-10-2018 XDD1_0884 4bb2c29cae78dd9c4852ae682bad1b6b 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 207 3.5E-85 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 XDD1_0884 4bb2c29cae78dd9c4852ae682bad1b6b 232 Gene3D G3DSA:3.40.50.620 1 232 2.1E-82 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_0884 4bb2c29cae78dd9c4852ae682bad1b6b 232 Pfam PF06508 Queuosine biosynthesis protein QueC 3 214 1.3E-83 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 XDD1_0884 4bb2c29cae78dd9c4852ae682bad1b6b 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 220 50.961 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 XDD1_0884 4bb2c29cae78dd9c4852ae682bad1b6b 232 PIRSF PIRSF006293 1 226 5.4E-85 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 XDD1_1153 6e1bacd111c403b052620edd7eb3ead3 273 Gene3D G3DSA:1.10.3730.10 166 273 1.5E-34 T 15-10-2018 XDD1_1153 6e1bacd111c403b052620edd7eb3ead3 273 SUPERFAMILY SSF48179 163 271 6.29E-29 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XDD1_1153 6e1bacd111c403b052620edd7eb3ead3 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 269 4.2E-29 T 15-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 XDD1_1153 6e1bacd111c403b052620edd7eb3ead3 273 SUPERFAMILY SSF51735 4 161 4.03E-40 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1153 6e1bacd111c403b052620edd7eb3ead3 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 269 1.9E-73 T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 XDD1_1153 6e1bacd111c403b052620edd7eb3ead3 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 269 24.778 T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 XDD1_1153 6e1bacd111c403b052620edd7eb3ead3 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 100 4.0E-22 T 15-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal XDD1_1153 6e1bacd111c403b052620edd7eb3ead3 273 PIRSF PIRSF000193 3 271 5.3E-74 T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 XDD1_1153 6e1bacd111c403b052620edd7eb3ead3 273 Gene3D G3DSA:3.40.50.720 2 165 3.9E-51 T 15-10-2018 XDD1_0380 ae587404526b16a06041a911808025fa 286 SUPERFAMILY SSF56931 36 286 2.75E-87 T 15-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 XDD1_0380 ae587404526b16a06041a911808025fa 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 75 92 3.1E-73 T 15-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 XDD1_0380 ae587404526b16a06041a911808025fa 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 97 113 3.1E-73 T 15-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 XDD1_0380 ae587404526b16a06041a911808025fa 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 165 183 3.1E-73 T 15-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 XDD1_0380 ae587404526b16a06041a911808025fa 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 200 218 3.1E-73 T 15-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 XDD1_0380 ae587404526b16a06041a911808025fa 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 255 275 3.1E-73 T 15-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 XDD1_0380 ae587404526b16a06041a911808025fa 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 120 139 3.1E-73 T 15-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 XDD1_0380 ae587404526b16a06041a911808025fa 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 233 250 3.1E-73 T 15-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 XDD1_0380 ae587404526b16a06041a911808025fa 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 150 164 3.1E-73 T 15-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 XDD1_0380 ae587404526b16a06041a911808025fa 286 Gene3D G3DSA:2.40.230.10 27 286 5.8E-99 T 15-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 XDD1_0380 ae587404526b16a06041a911808025fa 286 Pfam PF02253 Phospholipase A1 39 282 4.2E-89 T 15-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 XDD1_3467 9ab7a361c47e4a7f659ad9560cdc6fbf 571 Pfam PF00535 Glycosyl transferase family 2 11 127 5.8E-20 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XDD1_3467 9ab7a361c47e4a7f659ad9560cdc6fbf 571 SUPERFAMILY SSF53448 11 243 7.74E-34 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_3467 9ab7a361c47e4a7f659ad9560cdc6fbf 571 Gene3D G3DSA:3.90.550.10 7 241 2.7E-26 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_0723 f95641a1f52f5131ed0491c4a3a04088 148 SUPERFAMILY SSF55729 3 146 4.84E-32 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_0723 f95641a1f52f5131ed0491c4a3a04088 148 Pfam PF00583 Acetyltransferase (GNAT) family 21 120 6.9E-19 T 15-10-2018 IPR000182 GNAT domain XDD1_0723 f95641a1f52f5131ed0491c4a3a04088 148 Gene3D G3DSA:3.40.630.30 1 147 3.6E-46 T 15-10-2018 XDD1_0723 f95641a1f52f5131ed0491c4a3a04088 148 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 142 1.0E-43 T 15-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 XDD1_3584 03797d362e14b8de049ff3879d64641f 222 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 204 1.1E-60 T 15-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 XDD1_3584 03797d362e14b8de049ff3879d64641f 222 Pfam PF02592 Putative vitamin uptake transporter 43 199 2.7E-33 T 15-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 XDD1_3584 03797d362e14b8de049ff3879d64641f 222 Hamap MF_02088 Probable queuosine precursor transporter. 7 213 14.813 T 15-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 XDD1_0375 8bdaf9b4cc3a99b0a993e7d429683297 296 SUPERFAMILY SSF103481 42 146 2.48E-13 T 15-10-2018 XDD1_0375 8bdaf9b4cc3a99b0a993e7d429683297 296 Pfam PF00892 EamA-like transporter family 8 142 1.5E-16 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_0375 8bdaf9b4cc3a99b0a993e7d429683297 296 SUPERFAMILY SSF103481 188 285 2.75E-8 T 15-10-2018 XDD1_0375 8bdaf9b4cc3a99b0a993e7d429683297 296 TIGRFAM TIGR00688 rarD: protein RarD 7 260 6.5E-90 T 15-10-2018 IPR004626 RarD protein GO:0005887 XDD1_0428 e695a4eb69630b300b2b6593d2303109 828 ProSitePatterns PS01175 Ribonuclease II family signature. 571 595 - T 15-10-2018 IPR022966 Ribonuclease II/R, conserved site XDD1_0428 e695a4eb69630b300b2b6593d2303109 828 Pfam PF08461 Ribonuclease R winged-helix domain 38 101 3.5E-18 T 15-10-2018 IPR013668 Ribonuclease R winged-helix domain XDD1_0428 e695a4eb69630b300b2b6593d2303109 828 Pfam PF00575 S1 RNA binding domain 664 746 5.7E-16 T 15-10-2018 IPR003029 S1 domain GO:0003676 XDD1_0428 e695a4eb69630b300b2b6593d2303109 828 SUPERFAMILY SSF50249 83 163 4.32E-17 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_0428 e695a4eb69630b300b2b6593d2303109 828 SUPERFAMILY SSF50249 665 758 1.39E-21 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_0428 e695a4eb69630b300b2b6593d2303109 828 SMART SM00357 102 161 9.4E-15 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 XDD1_0428 e695a4eb69630b300b2b6593d2303109 828 Pfam PF08206 Ribonuclease B OB domain 103 160 1.4E-20 T 15-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain XDD1_0428 e695a4eb69630b300b2b6593d2303109 828 Pfam PF00773 RNB domain 276 603 3.5E-110 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 XDD1_0428 e695a4eb69630b300b2b6593d2303109 828 SUPERFAMILY SSF50249 156 253 2.57E-15 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_0428 e695a4eb69630b300b2b6593d2303109 828 SMART SM00955 276 604 3.5E-183 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 XDD1_0428 e695a4eb69630b300b2b6593d2303109 828 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 83 748 2.9E-268 T 15-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 XDD1_0428 e695a4eb69630b300b2b6593d2303109 828 Gene3D G3DSA:2.40.50.140 88 164 1.5E-15 T 15-10-2018 XDD1_0428 e695a4eb69630b300b2b6593d2303109 828 TIGRFAM TIGR02063 RNase_R: ribonuclease R 35 748 1.4E-277 T 15-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 XDD1_0428 e695a4eb69630b300b2b6593d2303109 828 Gene3D G3DSA:2.40.50.140 668 778 6.6E-24 T 15-10-2018 XDD1_0428 e695a4eb69630b300b2b6593d2303109 828 SMART SM00316 665 748 8.5E-14 T 15-10-2018 IPR022967 RNA-binding domain, S1 XDD1_0428 e695a4eb69630b300b2b6593d2303109 828 SMART SM00316 96 158 9.5 T 15-10-2018 IPR022967 RNA-binding domain, S1 XDD1_0428 e695a4eb69630b300b2b6593d2303109 828 SUPERFAMILY SSF50249 238 664 4.11E-141 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_0428 e695a4eb69630b300b2b6593d2303109 828 Hamap MF_01895 Ribonuclease R [rnr]. 54 748 57.255 T 15-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 XDD1_0939 ff3532c8f212d9793b0b2c59eaa98f6b 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 125.607 T 15-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 XDD1_0939 ff3532c8f212d9793b0b2c59eaa98f6b 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 230 1.6E-104 T 15-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 XDD1_0939 ff3532c8f212d9793b0b2c59eaa98f6b 240 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 1.3E-10 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 XDD1_0939 ff3532c8f212d9793b0b2c59eaa98f6b 240 SUPERFAMILY SSF56300 1 219 1.9E-30 T 15-10-2018 XDD1_1335 4f47d96ec48414a5de96c52dd033e386 266 Gene3D G3DSA:1.10.10.60 166 264 9.0E-20 T 15-10-2018 XDD1_1335 4f47d96ec48414a5de96c52dd033e386 266 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 211 252 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 XDD1_1335 4f47d96ec48414a5de96c52dd033e386 266 Pfam PF02311 AraC-like ligand binding domain 20 137 3.3E-5 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 XDD1_1335 4f47d96ec48414a5de96c52dd033e386 266 Pfam PF12833 Helix-turn-helix domain 180 257 1.2E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_1335 4f47d96ec48414a5de96c52dd033e386 266 SUPERFAMILY SSF46689 210 260 4.26E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1335 4f47d96ec48414a5de96c52dd033e386 266 SUPERFAMILY SSF51182 30 162 8.01E-10 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily XDD1_1335 4f47d96ec48414a5de96c52dd033e386 266 SMART SM00342 174 256 6.1E-18 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_1408 afbf9be0eecfd67a7b9dc28f1f8577b5 368 Pfam PF12698 ABC-2 family transporter protein 27 359 2.9E-45 T 15-10-2018 XDD1_1408 afbf9be0eecfd67a7b9dc28f1f8577b5 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 5.6E-7 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 XDD1_1408 afbf9be0eecfd67a7b9dc28f1f8577b5 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 5.6E-7 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 XDD1_1408 afbf9be0eecfd67a7b9dc28f1f8577b5 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 5.6E-7 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 XDD1_3857 bd06a63092e8c7b6e0472efa2affc6bc 156 Gene3D G3DSA:3.30.428.10 1 153 7.7E-25 T 15-10-2018 IPR036265 HIT-like superfamily XDD1_3857 bd06a63092e8c7b6e0472efa2affc6bc 156 Pfam PF01230 HIT domain 13 78 8.7E-8 T 15-10-2018 IPR001310 Histidine triad (HIT) protein XDD1_3857 bd06a63092e8c7b6e0472efa2affc6bc 156 PRINTS PR00332 Histidine triad family signature 90 100 1.3E-7 T 15-10-2018 IPR001310 Histidine triad (HIT) protein XDD1_3857 bd06a63092e8c7b6e0472efa2affc6bc 156 PRINTS PR00332 Histidine triad family signature 26 44 1.3E-7 T 15-10-2018 IPR001310 Histidine triad (HIT) protein XDD1_3857 bd06a63092e8c7b6e0472efa2affc6bc 156 PRINTS PR00332 Histidine triad family signature 5 21 1.3E-7 T 15-10-2018 IPR001310 Histidine triad (HIT) protein XDD1_3857 bd06a63092e8c7b6e0472efa2affc6bc 156 SUPERFAMILY SSF54197 2 106 1.55E-24 T 15-10-2018 IPR036265 HIT-like superfamily XDD1_3961 d96026d517a5ad5d0b0d0c1c92f462d1 803 SUPERFAMILY SSF50692 617 803 1.33E-43 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily XDD1_3961 d96026d517a5ad5d0b0d0c1c92f462d1 803 SUPERFAMILY SSF53706 1 638 6.16E-233 T 15-10-2018 XDD1_3961 d96026d517a5ad5d0b0d0c1c92f462d1 803 Gene3D G3DSA:3.40.228.10 1 274 7.5E-71 T 15-10-2018 XDD1_3961 d96026d517a5ad5d0b0d0c1c92f462d1 803 Pfam PF01568 Molydopterin dinucleotide binding domain 681 796 2.9E-16 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 XDD1_3961 d96026d517a5ad5d0b0d0c1c92f462d1 803 Gene3D G3DSA:2.40.40.20 628 803 5.0E-74 T 15-10-2018 XDD1_3961 d96026d517a5ad5d0b0d0c1c92f462d1 803 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 715 742 - T 15-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 XDD1_3961 d96026d517a5ad5d0b0d0c1c92f462d1 803 Gene3D G3DSA:3.40.228.10 547 627 1.2E-27 T 15-10-2018 XDD1_3961 d96026d517a5ad5d0b0d0c1c92f462d1 803 Gene3D G3DSA:3.40.50.740 297 471 5.9E-59 T 15-10-2018 XDD1_3961 d96026d517a5ad5d0b0d0c1c92f462d1 803 Pfam PF00384 Molybdopterin oxidoreductase 2 380 4.4E-22 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_3961 d96026d517a5ad5d0b0d0c1c92f462d1 803 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 802 0.0 T 15-10-2018 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 1.1E-28 T 15-10-2018 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 1.1E-28 T 15-10-2018 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.1E-28 T 15-10-2018 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 1.1E-28 T 15-10-2018 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 1.1E-28 T 15-10-2018 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.2E-66 T 15-10-2018 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 1.2E-66 T 15-10-2018 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.2E-66 T 15-10-2018 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 1.2E-66 T 15-10-2018 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 1.2E-66 T 15-10-2018 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 1.2E-66 T 15-10-2018 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 1.2E-66 T 15-10-2018 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 1.2E-66 T 15-10-2018 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.2E-66 T 15-10-2018 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 Gene3D G3DSA:3.50.50.60 144 261 2.6E-125 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 Gene3D G3DSA:3.30.390.30 338 450 1.0E-47 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 SUPERFAMILY SSF55424 336 450 2.58E-36 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 7.9E-214 T 15-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 Gene3D G3DSA:3.50.50.60 5 318 2.6E-125 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 SUPERFAMILY SSF51905 1 364 1.94E-56 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 PIRSF PIRSF000350 1 447 1.9E-87 T 15-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 2.4E-35 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 318 3.2E-70 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XDD1_3682 a6766c04700ac8f35d4bce4c7a4065de 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 15-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 XDD1_3569 fffcd5f741701769aeca05b939b27809 187 Gene3D G3DSA:3.30.420.470 5 175 8.9E-13 T 15-10-2018 XDD1_3569 fffcd5f741701769aeca05b939b27809 187 Pfam PF13358 DDE superfamily endonuclease 17 150 1.9E-28 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_3569 fffcd5f741701769aeca05b939b27809 187 SUPERFAMILY SSF53098 47 151 7.59E-5 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0312 2100ccde83af46d725cb330ef81b8659 170 PRINTS PR01576 Peptide deformylase signature 33 62 1.2E-37 T 15-10-2018 IPR023635 Peptide deformylase XDD1_0312 2100ccde83af46d725cb330ef81b8659 170 PRINTS PR01576 Peptide deformylase signature 101 119 1.2E-37 T 15-10-2018 IPR023635 Peptide deformylase XDD1_0312 2100ccde83af46d725cb330ef81b8659 170 PRINTS PR01576 Peptide deformylase signature 120 149 1.2E-37 T 15-10-2018 IPR023635 Peptide deformylase XDD1_0312 2100ccde83af46d725cb330ef81b8659 170 PRINTS PR01576 Peptide deformylase signature 89 100 1.2E-37 T 15-10-2018 IPR023635 Peptide deformylase XDD1_0312 2100ccde83af46d725cb330ef81b8659 170 Gene3D G3DSA:3.90.45.10 2 169 5.3E-67 T 15-10-2018 IPR036821 Peptide deformylase superfamily XDD1_0312 2100ccde83af46d725cb330ef81b8659 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.74 T 15-10-2018 IPR023635 Peptide deformylase XDD1_0312 2100ccde83af46d725cb330ef81b8659 170 SUPERFAMILY SSF56420 3 165 6.02E-62 T 15-10-2018 IPR036821 Peptide deformylase superfamily XDD1_0312 2100ccde83af46d725cb330ef81b8659 170 Pfam PF01327 Polypeptide deformylase 4 152 3.8E-51 T 15-10-2018 IPR023635 Peptide deformylase XDD1_0312 2100ccde83af46d725cb330ef81b8659 170 PIRSF PIRSF004749 1 170 3.0E-57 T 15-10-2018 IPR023635 Peptide deformylase XDD1_0312 2100ccde83af46d725cb330ef81b8659 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 2.1E-65 T 15-10-2018 IPR023635 Peptide deformylase XDD1_2785 1de012780dfae68d03fbb279bf502c7e 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 3.0E-24 T 15-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 XDD1_2785 1de012780dfae68d03fbb279bf502c7e 107 Gene3D G3DSA:2.60.300.12 2 107 4.2E-38 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XDD1_2785 1de012780dfae68d03fbb279bf502c7e 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 2.2E-57 T 15-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 XDD1_2785 1de012780dfae68d03fbb279bf502c7e 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 38.27 T 15-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 XDD1_2785 1de012780dfae68d03fbb279bf502c7e 107 SUPERFAMILY SSF89360 1 95 1.05E-32 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XDD1_2785 1de012780dfae68d03fbb279bf502c7e 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 3.4E-37 T 15-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 XDD1_2785 1de012780dfae68d03fbb279bf502c7e 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 15-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 XDD1_1523 afa01b8c3561b9064aabc573b0b1f9ad 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.7E-76 T 15-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 XDD1_1523 afa01b8c3561b9064aabc573b0b1f9ad 245 Pfam PF00977 Histidine biosynthesis protein 1 234 1.2E-76 T 15-10-2018 IPR006062 Histidine biosynthesis GO:0000105 XDD1_1523 afa01b8c3561b9064aabc573b0b1f9ad 245 Gene3D G3DSA:3.20.20.70 1 245 2.4E-92 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_1523 afa01b8c3561b9064aabc573b0b1f9ad 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.97 T 15-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 XDD1_1523 afa01b8c3561b9064aabc573b0b1f9ad 245 SUPERFAMILY SSF51366 1 244 2.29E-66 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XDD1_0228 9c0721f0e4fac36808877cdaae953ad0 142 Pfam PF13612 Transposase DDE domain 1 106 5.0E-45 T 15-10-2018 IPR025668 Transposase DDE domain XDD1_0250 9c0721f0e4fac36808877cdaae953ad0 142 Pfam PF13612 Transposase DDE domain 1 106 5.0E-45 T 15-10-2018 IPR025668 Transposase DDE domain XDD1_2031 695d18294f671cd37847885a3241e22d 350 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 28 330 1.9E-92 T 15-10-2018 IPR010732 Type VI secretion, TssG-like XDD1_2031 695d18294f671cd37847885a3241e22d 350 Pfam PF06996 Type VI secretion, TssG 29 330 2.9E-100 T 15-10-2018 IPR010732 Type VI secretion, TssG-like XDD1_1431 feb4beb8b0e34c84f1d8497d9fade595 296 Pfam PF00892 EamA-like transporter family 150 280 1.7E-18 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_1431 feb4beb8b0e34c84f1d8497d9fade595 296 SUPERFAMILY SSF103481 48 137 6.28E-6 T 15-10-2018 XDD1_1431 feb4beb8b0e34c84f1d8497d9fade595 296 SUPERFAMILY SSF103481 186 282 7.72E-11 T 15-10-2018 XDD1_2954 208b948e45cf13b188f65787e812c7fb 233 SUPERFAMILY SSF54423 22 78 1.05E-13 T 15-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 XDD1_2954 208b948e45cf13b188f65787e812c7fb 233 Pfam PF10411 Disulfide bond isomerase protein N-terminus 29 77 8.8E-13 T 15-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal XDD1_2954 208b948e45cf13b188f65787e812c7fb 233 Gene3D G3DSA:3.40.30.10 71 232 7.3E-48 T 15-10-2018 XDD1_2954 208b948e45cf13b188f65787e812c7fb 233 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XDD1_2954 208b948e45cf13b188f65787e812c7fb 233 Gene3D G3DSA:3.10.450.70 22 70 1.4E-17 T 15-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 XDD1_2954 208b948e45cf13b188f65787e812c7fb 233 Pfam PF13098 Thioredoxin-like domain 105 228 3.1E-27 T 15-10-2018 IPR012336 Thioredoxin-like fold XDD1_2954 208b948e45cf13b188f65787e812c7fb 233 SUPERFAMILY SSF52833 89 231 2.81E-36 T 15-10-2018 IPR036249 Thioredoxin-like superfamily XDD1_2392 c408e861f017acf669a6cc7a3b501c8c 199 PIRSF PIRSF006102 1 199 4.9E-58 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 XDD1_2392 c408e861f017acf669a6cc7a3b501c8c 199 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 197 2.8E-54 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 XDD1_2392 c408e861f017acf669a6cc7a3b501c8c 199 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 2 199 28.141 T 15-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 XDD1_2392 c408e861f017acf669a6cc7a3b501c8c 199 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 4 197 2.5E-98 T 15-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 XDD1_0577 97529e9de8d999220931d17cd3e29cce 129 SUPERFAMILY SSF88723 1 128 1.77E-33 T 15-10-2018 IPR029060 PIN-like domain superfamily XDD1_0577 97529e9de8d999220931d17cd3e29cce 129 Pfam PF01850 PIN domain 2 119 3.1E-15 T 15-10-2018 IPR002716 PIN domain XDD1_0577 97529e9de8d999220931d17cd3e29cce 129 Gene3D G3DSA:3.40.50.1010 1 128 3.0E-33 T 15-10-2018 XDD1_0577 97529e9de8d999220931d17cd3e29cce 129 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 126 10.442 T 15-10-2018 IPR022907 VapC family GO:0004540 XDD1_2355 f811c096c918842c1f969d0c693bdcd0 192 Pfam PF00239 Resolvase, N terminal domain 4 136 6.1E-47 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 XDD1_2355 f811c096c918842c1f969d0c693bdcd0 192 Gene3D G3DSA:3.40.50.1390 2 126 6.3E-52 T 15-10-2018 XDD1_2355 f811c096c918842c1f969d0c693bdcd0 192 SMART SM00857 3 137 1.2E-59 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 XDD1_2355 f811c096c918842c1f969d0c693bdcd0 192 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 15-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 XDD1_2355 f811c096c918842c1f969d0c693bdcd0 192 SUPERFAMILY SSF46689 139 182 2.15E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2355 f811c096c918842c1f969d0c693bdcd0 192 Pfam PF02796 Helix-turn-helix domain of resolvase 139 181 5.8E-9 T 15-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 XDD1_2355 f811c096c918842c1f969d0c693bdcd0 192 Gene3D G3DSA:1.10.10.60 139 186 5.4E-20 T 15-10-2018 XDD1_2355 f811c096c918842c1f969d0c693bdcd0 192 ProSitePatterns PS00398 Site-specific recombinases signature 2. 56 68 - T 15-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 XDD1_2355 f811c096c918842c1f969d0c693bdcd0 192 SUPERFAMILY SSF53041 3 137 4.84E-46 T 15-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 XDD1_3488 9f66462507f06852d196cb357da6389a 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 6.4E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_3488 9f66462507f06852d196cb357da6389a 298 Gene3D G3DSA:3.40.190.10 171 268 4.0E-10 T 15-10-2018 XDD1_3488 9f66462507f06852d196cb357da6389a 298 Gene3D G3DSA:1.10.10.10 6 94 4.4E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3488 9f66462507f06852d196cb357da6389a 298 SUPERFAMILY SSF53850 94 291 4.1E-22 T 15-10-2018 XDD1_3488 9f66462507f06852d196cb357da6389a 298 Pfam PF03466 LysR substrate binding domain 94 280 2.3E-16 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_3488 9f66462507f06852d196cb357da6389a 298 SUPERFAMILY SSF46785 4 115 7.26E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3488 9f66462507f06852d196cb357da6389a 298 Gene3D G3DSA:3.40.190.10 124 279 4.0E-10 T 15-10-2018 XDD1_3627 d3d44357ff5c03adaaf34449ded968c1 353 SUPERFAMILY SSF51735 140 306 1.11E-14 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_3627 d3d44357ff5c03adaaf34449ded968c1 353 SUPERFAMILY SSF50129 1 177 2.13E-41 T 15-10-2018 IPR011032 GroES-like superfamily XDD1_3627 d3d44357ff5c03adaaf34449ded968c1 353 SMART SM00829 7 326 8.9E-4 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XDD1_3627 d3d44357ff5c03adaaf34449ded968c1 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 133 1.4E-29 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XDD1_3627 d3d44357ff5c03adaaf34449ded968c1 353 Gene3D G3DSA:3.90.180.10 11 324 9.1E-71 T 15-10-2018 XDD1_3627 d3d44357ff5c03adaaf34449ded968c1 353 Gene3D G3DSA:3.40.50.720 151 285 9.1E-71 T 15-10-2018 XDD1_0439 b01846c52b8faae629c1d1b3758e3f34 247 Gene3D G3DSA:3.30.540.10 1 146 1.7E-46 T 15-10-2018 XDD1_0439 b01846c52b8faae629c1d1b3758e3f34 247 Gene3D G3DSA:3.40.190.80 147 246 4.2E-33 T 15-10-2018 XDD1_0439 b01846c52b8faae629c1d1b3758e3f34 247 SUPERFAMILY SSF56655 1 244 1.57E-75 T 15-10-2018 XDD1_0439 b01846c52b8faae629c1d1b3758e3f34 247 Pfam PF00459 Inositol monophosphatase family 4 231 1.3E-52 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XDD1_0439 b01846c52b8faae629c1d1b3758e3f34 247 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 205 219 - T 15-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 XDD1_0439 b01846c52b8faae629c1d1b3758e3f34 247 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 15-10-2018 IPR020583 Inositol monophosphatase, metal-binding site XDD1_0439 b01846c52b8faae629c1d1b3758e3f34 247 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 1 247 41.012 T 15-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 XDD1_0439 b01846c52b8faae629c1d1b3758e3f34 247 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 245 8.1E-98 T 15-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 XDD1_0576 3bd5991298ba429bdf367e26d4d5e807 393 PIRSF PIRSF028408 13 393 6.5E-113 T 15-10-2018 IPR014544 Uncharacterised conserved protein UCP028408 XDD1_0576 3bd5991298ba429bdf367e26d4d5e807 393 Pfam PF11795 Uncharacterized protein conserved in bacteria N-term (DUF3322) 16 198 4.6E-40 T 15-10-2018 IPR024537 Domain of unknown function DUF3322 XDD1_0576 3bd5991298ba429bdf367e26d4d5e807 393 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 217 386 1.9E-41 T 15-10-2018 IPR024534 Domain of unknown function DUF2220 XDD1_3541 de1aa7990c95870988228fc8794d0b2e 83 Pfam PF07338 Protein of unknown function (DUF1471) 32 83 2.5E-18 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 XDD1_3541 de1aa7990c95870988228fc8794d0b2e 83 Gene3D G3DSA:3.30.1660.10 20 83 3.5E-18 T 15-10-2018 IPR025543 Dodecin-like XDD1_3541 de1aa7990c95870988228fc8794d0b2e 83 SUPERFAMILY SSF159871 3 83 1.28E-21 T 15-10-2018 IPR036275 YdgH-like superfamily XDD1_2444 264ae1eaf9c86a4a5b0b6cff128cb7ff 397 Gene3D G3DSA:3.40.640.10 15 255 5.2E-80 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_2444 264ae1eaf9c86a4a5b0b6cff128cb7ff 397 SUPERFAMILY SSF53383 15 391 6.25E-97 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_2444 264ae1eaf9c86a4a5b0b6cff128cb7ff 397 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 25 385 1.9E-99 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase XDD1_2444 264ae1eaf9c86a4a5b0b6cff128cb7ff 397 PIRSF PIRSF000390 15 387 1.2E-100 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase XDD1_2444 264ae1eaf9c86a4a5b0b6cff128cb7ff 397 Gene3D G3DSA:3.90.1150.10 256 393 5.5E-30 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_1994 0467631e2d94b45c99e92ad838787bf3 322 Pfam PF12833 Helix-turn-helix domain 225 298 2.7E-20 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_1994 0467631e2d94b45c99e92ad838787bf3 322 SUPERFAMILY SSF46689 255 307 2.15E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1994 0467631e2d94b45c99e92ad838787bf3 322 SMART SM00342 219 302 8.1E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_1994 0467631e2d94b45c99e92ad838787bf3 322 Gene3D G3DSA:1.10.10.60 202 306 7.1E-26 T 15-10-2018 XDD1_1994 0467631e2d94b45c99e92ad838787bf3 322 SUPERFAMILY SSF46689 203 252 3.28E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1994 0467631e2d94b45c99e92ad838787bf3 322 Pfam PF06719 AraC-type transcriptional regulator N-terminus 37 190 3.4E-42 T 15-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal XDD1_1994 0467631e2d94b45c99e92ad838787bf3 322 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 256 298 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 XDD1_3382 23ec5c4e6053af68de21a9b02405893f 969 Gene3D G3DSA:2.30.30.930 55 114 1.7E-27 T 15-10-2018 XDD1_3382 23ec5c4e6053af68de21a9b02405893f 969 Pfam PF00176 SNF2 family N-terminal domain 174 441 8.5E-19 T 15-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 XDD1_3382 23ec5c4e6053af68de21a9b02405893f 969 Gene3D G3DSA:3.40.50.10810 630 713 2.0E-5 T 15-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily XDD1_3382 23ec5c4e6053af68de21a9b02405893f 969 Gene3D G3DSA:3.40.50.10810 150 429 8.8E-107 T 15-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily XDD1_3382 23ec5c4e6053af68de21a9b02405893f 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 28.82 T 15-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 XDD1_3382 23ec5c4e6053af68de21a9b02405893f 969 SMART SM00487 150 342 2.3E-21 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XDD1_3382 23ec5c4e6053af68de21a9b02405893f 969 SUPERFAMILY SSF52540 143 371 4.06E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3382 23ec5c4e6053af68de21a9b02405893f 969 Gene3D G3DSA:3.40.50.300 430 629 5.4E-50 T 15-10-2018 XDD1_3382 23ec5c4e6053af68de21a9b02405893f 969 Pfam PF12137 RNA polymerase recycling family C-terminal 606 966 9.0E-155 T 15-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 XDD1_3382 23ec5c4e6053af68de21a9b02405893f 969 Gene3D G3DSA:3.30.360.80 714 787 7.2E-31 T 15-10-2018 XDD1_3382 23ec5c4e6053af68de21a9b02405893f 969 Pfam PF00271 Helicase conserved C-terminal domain 494 602 3.1E-15 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_3382 23ec5c4e6053af68de21a9b02405893f 969 SUPERFAMILY SSF52540 273 645 1.66E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3382 23ec5c4e6053af68de21a9b02405893f 969 SMART SM00490 518 602 1.6E-16 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_3382 23ec5c4e6053af68de21a9b02405893f 969 Gene3D G3DSA:2.30.30.140 1 53 5.1E-24 T 15-10-2018 XDD1_2412 5d2734a207faff7f2b21fc048f146edb 715 Pfam PF05127 Helicase 199 361 1.1E-38 T 15-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 XDD1_2412 5d2734a207faff7f2b21fc048f146edb 715 SUPERFAMILY SSF55729 386 548 2.93E-9 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_2412 5d2734a207faff7f2b21fc048f146edb 715 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 20 686 47.012 T 15-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 XDD1_2412 5d2734a207faff7f2b21fc048f146edb 715 Pfam PF13718 GNAT acetyltransferase 2 510 567 1.0E-6 T 15-10-2018 IPR000182 GNAT domain XDD1_2412 5d2734a207faff7f2b21fc048f146edb 715 Pfam PF13718 GNAT acetyltransferase 2 397 509 9.9E-13 T 15-10-2018 IPR000182 GNAT domain XDD1_2412 5d2734a207faff7f2b21fc048f146edb 715 Gene3D G3DSA:1.20.120.890 566 703 1.6E-48 T 15-10-2018 IPR038321 TmcA, C-terminal domain superfamily XDD1_2412 5d2734a207faff7f2b21fc048f146edb 715 Pfam PF17176 tRNA-binding domain 571 688 7.9E-42 T 15-10-2018 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain XDD1_2412 5d2734a207faff7f2b21fc048f146edb 715 Gene3D G3DSA:3.40.50.12320 195 351 2.6E-42 T 15-10-2018 XDD1_2412 5d2734a207faff7f2b21fc048f146edb 715 SUPERFAMILY SSF52540 175 311 2.49E-11 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2412 5d2734a207faff7f2b21fc048f146edb 715 Gene3D G3DSA:3.40.630.30 353 565 4.4E-68 T 15-10-2018 XDD1_2412 5d2734a207faff7f2b21fc048f146edb 715 Gene3D G3DSA:3.40.50.11040 6 194 3.1E-55 T 15-10-2018 XDD1_1655 b99cf9fcfde5b3adfde27c9ece48a888 89 Gene3D G3DSA:3.40.47.10 10 84 1.2E-13 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_1655 b99cf9fcfde5b3adfde27c9ece48a888 89 SUPERFAMILY SSF53901 13 70 1.92E-10 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_1655 b99cf9fcfde5b3adfde27c9ece48a888 89 Pfam PF00108 Thiolase, N-terminal domain 13 63 1.5E-12 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 XDD1_2870 f452e8f27a8629a12e0ce2f799e26c5d 341 SUPERFAMILY SSF56349 61 329 3.24E-46 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XDD1_2870 f452e8f27a8629a12e0ce2f799e26c5d 341 Pfam PF00589 Phage integrase family 175 249 1.6E-9 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XDD1_2870 f452e8f27a8629a12e0ce2f799e26c5d 341 Pfam PF00589 Phage integrase family 261 320 3.5E-14 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XDD1_2870 f452e8f27a8629a12e0ce2f799e26c5d 341 Gene3D G3DSA:1.10.443.10 171 338 1.3E-50 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XDD1_3094 257c93968ad0380eff5eb06c98beb166 111 SUPERFAMILY SSF47413 25 97 8.44E-31 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_3094 257c93968ad0380eff5eb06c98beb166 111 Pfam PF13693 Winged helix-turn-helix DNA-binding 31 104 6.6E-38 T 15-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain XDD1_3094 257c93968ad0380eff5eb06c98beb166 111 Gene3D G3DSA:1.10.260.40 25 95 1.0E-32 T 15-10-2018 XDD1_0623 1caa7beb062a97df243e959b88391a08 192 Pfam PF02342 TerD domain 1 187 5.8E-86 T 15-10-2018 IPR003325 TerD domain XDD1_0623 1caa7beb062a97df243e959b88391a08 192 Gene3D G3DSA:2.60.60.30 19 186 7.7E-80 T 15-10-2018 XDD1_3210 6b63a7e64ebfc25b86b3ae11d37c1712 50 Gene3D G3DSA:3.40.50.720 5 49 6.4E-6 T 15-10-2018 XDD1_3210 6b63a7e64ebfc25b86b3ae11d37c1712 50 SUPERFAMILY SSF51735 4 36 4.2E-5 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1391 0fd824e314e1cb51a2c3d2f106924d4c 94 Gene3D G3DSA:1.10.260.40 3 74 1.5E-32 T 15-10-2018 XDD1_1391 0fd824e314e1cb51a2c3d2f106924d4c 94 SUPERFAMILY SSF47413 3 75 1.97E-30 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_1391 0fd824e314e1cb51a2c3d2f106924d4c 94 Pfam PF13693 Winged helix-turn-helix DNA-binding 9 81 3.8E-37 T 15-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain XDD1_3882 421b129d910f30577ea852601aa32c15 182 Gene3D G3DSA:3.40.50.980 58 181 3.8E-25 T 15-10-2018 XDD1_3882 421b129d910f30577ea852601aa32c15 182 Pfam PF00501 AMP-binding enzyme 69 172 7.5E-18 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_3882 421b129d910f30577ea852601aa32c15 182 SUPERFAMILY SSF56801 51 175 1.27E-24 T 15-10-2018 XDD1_1886 078658e813321a27b045ee7d86bca0f6 623 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 623 4.6E-184 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like XDD1_1886 078658e813321a27b045ee7d86bca0f6 623 Pfam PF05947 Type VI secretion system, TssF 6 621 9.0E-215 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like XDD1_1886 078658e813321a27b045ee7d86bca0f6 623 PIRSF PIRSF028304 1 623 1.7E-171 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like XDD1_2219 9b18250d999845505c4422f2c4771301 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.821 T 15-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XDD1_2219 9b18250d999845505c4422f2c4771301 396 SUPERFAMILY SSF53686 4 389 3.54E-143 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XDD1_2219 9b18250d999845505c4422f2c4771301 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 15-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XDD1_2219 9b18250d999845505c4422f2c4771301 396 Gene3D G3DSA:3.40.50.1100 53 383 1.4E-182 T 15-10-2018 XDD1_2219 9b18250d999845505c4422f2c4771301 396 PIRSF PIRSF001413 1 396 2.9E-170 T 15-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XDD1_2219 9b18250d999845505c4422f2c4771301 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 372 2.2E-49 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XDD1_2219 9b18250d999845505c4422f2c4771301 396 Gene3D G3DSA:3.40.50.1100 9 204 1.4E-182 T 15-10-2018 XDD1_2219 9b18250d999845505c4422f2c4771301 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 388 3.3E-191 T 15-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XDD1_3301 5cc4a1b46ca84c4c606e98ddd87e065a 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 20 240 1.6E-77 T 15-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 XDD1_3301 5cc4a1b46ca84c4c606e98ddd87e065a 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 13 240 2.4E-97 T 15-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 XDD1_3301 5cc4a1b46ca84c4c606e98ddd87e065a 251 Gene3D G3DSA:3.40.1180.10 6 242 5.4E-90 T 15-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 XDD1_3301 5cc4a1b46ca84c4c606e98ddd87e065a 251 SUPERFAMILY SSF64005 10 236 7.32E-87 T 15-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 XDD1_3301 5cc4a1b46ca84c4c606e98ddd87e065a 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 13 241 39.304 T 15-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 XDD1_3301 5cc4a1b46ca84c4c606e98ddd87e065a 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 186 203 - T 15-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 XDD1_3965 471c97766829dc9569b6a20142ec8ef6 477 Pfam PF14559 Tetratricopeptide repeat 110 166 1.7E-5 T 15-10-2018 XDD1_3965 471c97766829dc9569b6a20142ec8ef6 477 Pfam PF04575 Protein of unknown function (DUF560) 186 477 8.0E-50 T 15-10-2018 IPR007655 Protein of unknown function DUF560 XDD1_3965 471c97766829dc9569b6a20142ec8ef6 477 Gene3D G3DSA:1.25.40.10 101 180 4.0E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_3965 471c97766829dc9569b6a20142ec8ef6 477 SUPERFAMILY SSF48452 102 177 5.22E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_0173 7fd9b5742163efcd6cb065dcda7559bf 168 Gene3D G3DSA:1.20.120.1490 60 168 7.3E-26 T 15-10-2018 XDD1_0173 7fd9b5742163efcd6cb065dcda7559bf 168 PIRSF PIRSF034445 1 166 3.6E-31 T 15-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 XDD1_0173 7fd9b5742163efcd6cb065dcda7559bf 168 Pfam PF07813 LTXXQ motif family protein 64 155 3.3E-13 T 15-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 XDD1_2024 eb93b327227d30d6ec6da3a3b3d2114d 187 Pfam PF11713 Peptidase C80 family 17 118 6.2E-5 T 15-10-2018 IPR020974 CGT/MARTX, cysteine protease (CPD) domain XDD1_3160 29c46e662c9500f1e21521ed80fb5005 208 SUPERFAMILY SSF53335 11 204 1.69E-47 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_3160 29c46e662c9500f1e21521ed80fb5005 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 4 208 37.561 T 15-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 XDD1_3160 29c46e662c9500f1e21521ed80fb5005 208 Gene3D G3DSA:3.40.50.150 1 207 1.4E-74 T 15-10-2018 XDD1_3160 29c46e662c9500f1e21521ed80fb5005 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 207 1.3E-79 T 15-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 XDD1_3160 29c46e662c9500f1e21521ed80fb5005 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 15-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 XDD1_3160 29c46e662c9500f1e21521ed80fb5005 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6 205 4.0E-68 T 15-10-2018 XDD1_1690 b0868e957cf4bf2cd158e0128395ee6b 127 Pfam PF05521 Phage head-tail joining protein 22 120 2.6E-27 T 15-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor XDD1_1690 b0868e957cf4bf2cd158e0128395ee6b 127 Gene3D G3DSA:2.40.10.270 16 126 3.6E-41 T 15-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily XDD1_1690 b0868e957cf4bf2cd158e0128395ee6b 127 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 21 121 4.0E-17 T 15-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor XDD1_0115 3b8346dab576628644e578babc86eedf 247 Pfam PF03725 3' exoribonuclease family, domain 2 163 229 1.8E-8 T 15-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XDD1_0115 3b8346dab576628644e578babc86eedf 247 SUPERFAMILY SSF54211 5 186 9.62E-43 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_0115 3b8346dab576628644e578babc86eedf 247 ProSitePatterns PS01277 Ribonuclease PH signature. 121 134 - T 15-10-2018 IPR018336 Ribonuclease PH, conserved site XDD1_0115 3b8346dab576628644e578babc86eedf 247 Gene3D G3DSA:3.30.230.70 15 243 6.1E-61 T 15-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XDD1_0115 3b8346dab576628644e578babc86eedf 247 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 7 241 3.3E-111 T 15-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 XDD1_0115 3b8346dab576628644e578babc86eedf 247 Hamap MF_00564 Ribonuclease PH [rph]. 16 242 44.81 T 15-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 XDD1_0115 3b8346dab576628644e578babc86eedf 247 Pfam PF01138 3' exoribonuclease family, domain 1 15 145 4.7E-24 T 15-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XDD1_0115 3b8346dab576628644e578babc86eedf 247 SUPERFAMILY SSF55666 158 242 3.4E-24 T 15-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XDD1_2100 6405720c5fe7f2eb1a2a2f5da5e56a34 212 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 31.659 T 15-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 XDD1_2100 6405720c5fe7f2eb1a2a2f5da5e56a34 212 Pfam PF02525 Flavodoxin-like fold 3 196 9.3E-46 T 15-10-2018 IPR003680 Flavodoxin-like fold XDD1_2100 6405720c5fe7f2eb1a2a2f5da5e56a34 212 SUPERFAMILY SSF52218 1 200 5.87E-54 T 15-10-2018 IPR029039 Flavoprotein-like superfamily XDD1_2100 6405720c5fe7f2eb1a2a2f5da5e56a34 212 Gene3D G3DSA:3.40.50.360 1 201 8.6E-62 T 15-10-2018 IPR029039 Flavoprotein-like superfamily XDD1_0995 ab3284ecc5a5a94557f7b783dd5fb937 200 Pfam PF01810 LysE type translocator 13 195 2.7E-21 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 XDD1_2454 809557565e5e47d0f94df00db1da63d1 412 SUPERFAMILY SSF111369 73 308 1.15E-53 T 15-10-2018 XDD1_2454 809557565e5e47d0f94df00db1da63d1 412 Gene3D G3DSA:2.40.50.100 80 224 2.0E-87 T 15-10-2018 XDD1_2454 809557565e5e47d0f94df00db1da63d1 412 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 56 384 2.7E-77 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 XDD1_2454 809557565e5e47d0f94df00db1da63d1 412 Gene3D G3DSA:2.40.420.20 314 382 2.0E-87 T 15-10-2018 XDD1_2454 809557565e5e47d0f94df00db1da63d1 412 Gene3D G3DSA:1.10.287.470 115 188 2.0E-87 T 15-10-2018 XDD1_2454 809557565e5e47d0f94df00db1da63d1 412 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 78 303 8.2E-16 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XDD1_2454 809557565e5e47d0f94df00db1da63d1 412 Gene3D G3DSA:2.40.30.170 73 313 2.0E-87 T 15-10-2018 XDD1_2454 809557565e5e47d0f94df00db1da63d1 412 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 3 404 49.535 T 15-10-2018 IPR022824 Multidrug resistance protein MdtA XDD1_2574 873c331e343ed55b16378c669b27b659 457 SUPERFAMILY SSF53448 84 358 2.55E-64 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_2574 873c331e343ed55b16378c669b27b659 457 Pfam PF13641 Glycosyltransferase like family 2 90 310 6.9E-36 T 15-10-2018 XDD1_2574 873c331e343ed55b16378c669b27b659 457 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 44 451 2.0E-196 T 15-10-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0043708 XDD1_2574 873c331e343ed55b16378c669b27b659 457 Gene3D G3DSA:3.90.550.10 68 300 7.2E-45 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_2658 097baa2ddd7f7d23fb725e6774d8e874 196 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 36.615 T 15-10-2018 IPR004507 Flavin prenyltransferase UbiX-like XDD1_2658 097baa2ddd7f7d23fb725e6774d8e874 196 SUPERFAMILY SSF52507 2 179 2.49E-57 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 XDD1_2658 097baa2ddd7f7d23fb725e6774d8e874 196 Gene3D G3DSA:3.40.50.1950 2 194 2.2E-77 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 XDD1_2658 097baa2ddd7f7d23fb725e6774d8e874 196 Pfam PF02441 Flavoprotein 2 165 3.3E-22 T 15-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 XDD1_2658 097baa2ddd7f7d23fb725e6774d8e874 196 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 8.6E-72 T 15-10-2018 IPR004507 Flavin prenyltransferase UbiX-like XDD1_2257 d7b0d8f62eaf0aa3d34a142a79605551 433 Gene3D G3DSA:3.50.50.60 105 404 4.0E-52 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_2257 d7b0d8f62eaf0aa3d34a142a79605551 433 Gene3D G3DSA:3.30.9.10 134 361 4.0E-52 T 15-10-2018 XDD1_2257 d7b0d8f62eaf0aa3d34a142a79605551 433 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 50.069 T 15-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 XDD1_2257 d7b0d8f62eaf0aa3d34a142a79605551 433 Pfam PF01266 FAD dependent oxidoreductase 2 397 1.7E-73 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 XDD1_2257 d7b0d8f62eaf0aa3d34a142a79605551 433 Gene3D G3DSA:3.50.50.60 1 74 2.5E-12 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_2257 d7b0d8f62eaf0aa3d34a142a79605551 433 SUPERFAMILY SSF54373 269 359 3.66E-16 T 15-10-2018 XDD1_2257 d7b0d8f62eaf0aa3d34a142a79605551 433 SUPERFAMILY SSF51905 1 420 3.88E-54 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1125 a775e9f0a12e9905ab8728daec472670 206 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 92 185 9.0E-4 T 15-10-2018 IPR004914 Antirestriction protein XDD1_1125 a775e9f0a12e9905ab8728daec472670 206 Gene3D G3DSA:1.10.472.120 74 185 5.7E-17 T 15-10-2018 XDD1_1125 a775e9f0a12e9905ab8728daec472670 206 Pfam PF03230 Antirestriction protein 96 185 1.1E-18 T 15-10-2018 IPR004914 Antirestriction protein XDD1_2794 5b0a195bda9b84f3fb60268bb173fa6b 112 Gene3D G3DSA:3.30.70.120 1 112 2.9E-49 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal XDD1_2794 5b0a195bda9b84f3fb60268bb173fa6b 112 PRINTS PR00340 P-II protein signature 2 17 1.5E-44 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XDD1_2794 5b0a195bda9b84f3fb60268bb173fa6b 112 PRINTS PR00340 P-II protein signature 23 41 1.5E-44 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XDD1_2794 5b0a195bda9b84f3fb60268bb173fa6b 112 PRINTS PR00340 P-II protein signature 52 75 1.5E-44 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XDD1_2794 5b0a195bda9b84f3fb60268bb173fa6b 112 PRINTS PR00340 P-II protein signature 83 103 1.5E-44 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XDD1_2794 5b0a195bda9b84f3fb60268bb173fa6b 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-44 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XDD1_2794 5b0a195bda9b84f3fb60268bb173fa6b 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 15-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 XDD1_2794 5b0a195bda9b84f3fb60268bb173fa6b 112 SMART SM00938 4 105 1.3E-68 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XDD1_2794 5b0a195bda9b84f3fb60268bb173fa6b 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 15-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 XDD1_2794 5b0a195bda9b84f3fb60268bb173fa6b 112 SUPERFAMILY SSF54913 1 112 3.5E-47 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta XDD1_2794 5b0a195bda9b84f3fb60268bb173fa6b 112 PIRSF PIRSF039144 1 112 4.4E-58 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XDD1_3435 c80fe484ae3fe7a9601386d72512474f 100 ProDom PD064783 PHAGE HOLIN LYSIS P2 MEMBRANE GPY Y TRANSMEMBRANE HOMOLOG INNER 4 83 5.0E-20 T 15-10-2018 IPR007633 Bacteriophage P2, GpY, holin XDD1_3435 c80fe484ae3fe7a9601386d72512474f 100 Pfam PF04550 Phage holin family 2 4 89 9.0E-43 T 15-10-2018 IPR007633 Bacteriophage P2, GpY, holin XDD1_2847 c80fe484ae3fe7a9601386d72512474f 100 ProDom PD064783 PHAGE HOLIN LYSIS P2 MEMBRANE GPY Y TRANSMEMBRANE HOMOLOG INNER 4 83 5.0E-20 T 15-10-2018 IPR007633 Bacteriophage P2, GpY, holin XDD1_2847 c80fe484ae3fe7a9601386d72512474f 100 Pfam PF04550 Phage holin family 2 4 89 9.0E-43 T 15-10-2018 IPR007633 Bacteriophage P2, GpY, holin XDD1_3411 8ccc345fbdc1fed62b626c233b9d3c99 385 Hamap MF_01262 CCA-adding enzyme [cca]. 1 377 46.035 T 15-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 XDD1_3411 8ccc345fbdc1fed62b626c233b9d3c99 385 Pfam PF01743 Poly A polymerase head domain 3 122 1.4E-16 T 15-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 XDD1_3411 8ccc345fbdc1fed62b626c233b9d3c99 385 SUPERFAMILY SSF81301 2 119 3.92E-30 T 15-10-2018 XDD1_3411 8ccc345fbdc1fed62b626c233b9d3c99 385 Gene3D G3DSA:1.10.3090.10 122 383 4.2E-45 T 15-10-2018 XDD1_3411 8ccc345fbdc1fed62b626c233b9d3c99 385 SUPERFAMILY SSF81891 120 379 3.53E-51 T 15-10-2018 XDD1_3411 8ccc345fbdc1fed62b626c233b9d3c99 385 PIRSF PIRSF000813 1 384 2.0E-164 T 15-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 XDD1_3411 8ccc345fbdc1fed62b626c233b9d3c99 385 Gene3D G3DSA:3.30.460.10 1 121 6.5E-27 T 15-10-2018 XDD1_3411 8ccc345fbdc1fed62b626c233b9d3c99 385 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 3.2E-16 T 15-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 XDD1_1729 2c9e607ef182842b966f4f0655d06d64 282 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 10 281 3.4E-139 T 15-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 XDD1_1729 2c9e607ef182842b966f4f0655d06d64 282 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 11 281 1.2E-112 T 15-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 XDD1_0411 ce2e40fcce6422f746bedac75e4242d5 496 SUPERFAMILY SSF103473 6 494 3.4E-54 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0411 ce2e40fcce6422f746bedac75e4242d5 496 ProSitePatterns PS00216 Sugar transport proteins signature 1. 68 84 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 XDD1_0411 ce2e40fcce6422f746bedac75e4242d5 496 Gene3D G3DSA:1.20.1720.10 14 246 6.2E-37 T 15-10-2018 XDD1_0411 ce2e40fcce6422f746bedac75e4242d5 496 Pfam PF07690 Major Facilitator Superfamily 19 406 1.0E-44 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0411 ce2e40fcce6422f746bedac75e4242d5 496 PRINTS PR01035 Tetracycline resistance protein signature 27 43 8.1E-8 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 XDD1_0411 ce2e40fcce6422f746bedac75e4242d5 496 PRINTS PR01035 Tetracycline resistance protein signature 314 334 8.1E-8 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 XDD1_0411 ce2e40fcce6422f746bedac75e4242d5 496 PRINTS PR01035 Tetracycline resistance protein signature 139 161 8.1E-8 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 XDD1_2399 d9ba68f5844313d3d09143efc21cf637 347 Pfam PF13384 Homeodomain-like domain 26 73 4.0E-10 T 15-10-2018 XDD1_2399 d9ba68f5844313d3d09143efc21cf637 347 SUPERFAMILY SSF46689 14 140 1.68E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2399 d9ba68f5844313d3d09143efc21cf637 347 Gene3D G3DSA:3.30.420.470 155 335 1.3E-10 T 15-10-2018 XDD1_2399 d9ba68f5844313d3d09143efc21cf637 347 Pfam PF13358 DDE superfamily endonuclease 177 310 1.4E-25 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2399 d9ba68f5844313d3d09143efc21cf637 347 Pfam PF13592 Winged helix-turn helix 108 156 1.0E-6 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_2596 999beafa2f3ec653584928e5c5274f8f 330 Pfam PF03466 LysR substrate binding domain 98 284 1.4E-26 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_2596 999beafa2f3ec653584928e5c5274f8f 330 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 3.1E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2596 999beafa2f3ec653584928e5c5274f8f 330 Gene3D G3DSA:3.40.190.10 169 262 9.7E-53 T 15-10-2018 XDD1_2596 999beafa2f3ec653584928e5c5274f8f 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.9E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2596 999beafa2f3ec653584928e5c5274f8f 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.9E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2596 999beafa2f3ec653584928e5c5274f8f 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.9E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2596 999beafa2f3ec653584928e5c5274f8f 330 Gene3D G3DSA:3.40.190.10 103 269 9.7E-53 T 15-10-2018 XDD1_2596 999beafa2f3ec653584928e5c5274f8f 330 SUPERFAMILY SSF53850 96 286 3.26E-25 T 15-10-2018 XDD1_2596 999beafa2f3ec653584928e5c5274f8f 330 SUPERFAMILY SSF46785 10 119 2.85E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_2596 999beafa2f3ec653584928e5c5274f8f 330 Gene3D G3DSA:1.10.10.10 7 93 3.5E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2564 b5525ef33bf653cba03f54eece8694b0 401 PRINTS PR00166 Aromatic amino acid permease signature 37 56 6.8E-76 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 XDD1_2564 b5525ef33bf653cba03f54eece8694b0 401 PRINTS PR00166 Aromatic amino acid permease signature 82 102 6.8E-76 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 XDD1_2564 b5525ef33bf653cba03f54eece8694b0 401 PRINTS PR00166 Aromatic amino acid permease signature 148 168 6.8E-76 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 XDD1_2564 b5525ef33bf653cba03f54eece8694b0 401 PRINTS PR00166 Aromatic amino acid permease signature 221 240 6.8E-76 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 XDD1_2564 b5525ef33bf653cba03f54eece8694b0 401 PRINTS PR00166 Aromatic amino acid permease signature 282 301 6.8E-76 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 XDD1_2564 b5525ef33bf653cba03f54eece8694b0 401 PRINTS PR00166 Aromatic amino acid permease signature 182 204 6.8E-76 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 XDD1_2564 b5525ef33bf653cba03f54eece8694b0 401 PRINTS PR00166 Aromatic amino acid permease signature 10 33 6.8E-76 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 XDD1_2564 b5525ef33bf653cba03f54eece8694b0 401 PRINTS PR00166 Aromatic amino acid permease signature 316 334 6.8E-76 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 XDD1_2564 b5525ef33bf653cba03f54eece8694b0 401 Gene3D G3DSA:1.20.1740.10 2 399 5.6E-6 T 15-10-2018 XDD1_2564 b5525ef33bf653cba03f54eece8694b0 401 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 382 2.4E-128 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 XDD1_2564 b5525ef33bf653cba03f54eece8694b0 401 Pfam PF03222 Tryptophan/tyrosine permease family 3 388 1.4E-124 T 15-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 XDD1_2564 b5525ef33bf653cba03f54eece8694b0 401 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 15-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site XDD1_0777 bf4dc4d54e61827da8d864abc7916ac1 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 1.6E-91 T 15-10-2018 IPR005583 Peroxide stress protein YaaA XDD1_0777 bf4dc4d54e61827da8d864abc7916ac1 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.733 T 15-10-2018 IPR005583 Peroxide stress protein YaaA XDD1_2625 eb5994983e9ef8ef8de961b143eebda1 415 Gene3D G3DSA:2.30.40.10 15 410 3.1E-154 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XDD1_2625 eb5994983e9ef8ef8de961b143eebda1 415 Pfam PF01979 Amidohydrolase family 72 394 1.9E-17 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 XDD1_2625 eb5994983e9ef8ef8de961b143eebda1 415 SUPERFAMILY SSF51338 8 413 8.17E-27 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XDD1_2625 eb5994983e9ef8ef8de961b143eebda1 415 SUPERFAMILY SSF51556 74 373 1.99E-79 T 15-10-2018 IPR032466 Metal-dependent hydrolase XDD1_2625 eb5994983e9ef8ef8de961b143eebda1 415 Gene3D G3DSA:3.20.20.140 75 373 3.1E-154 T 15-10-2018 XDD1_2625 eb5994983e9ef8ef8de961b143eebda1 415 TIGRFAM TIGR01224 hutI: imidazolonepropionase 37 412 8.8E-142 T 15-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 XDD1_2625 eb5994983e9ef8ef8de961b143eebda1 415 Hamap MF_00372 Imidazolonepropionase [hutI]. 9 413 39.998 T 15-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 XDD1_1208 f054a454f1413d62676365ea99cabbd0 182 Pfam PF05239 PRC-barrel domain 104 177 4.5E-11 T 15-10-2018 IPR027275 PRC-barrel domain XDD1_1208 f054a454f1413d62676365ea99cabbd0 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 23.911 T 15-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 XDD1_1208 f054a454f1413d62676365ea99cabbd0 182 Pfam PF01782 RimM N-terminal domain 16 94 8.4E-25 T 15-10-2018 IPR002676 RimM, N-terminal GO:0006364 XDD1_1208 f054a454f1413d62676365ea99cabbd0 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 3.6E-58 T 15-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 XDD1_1208 f054a454f1413d62676365ea99cabbd0 182 Gene3D G3DSA:2.40.30.60 5 100 3.4E-32 T 15-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 XDD1_1208 f054a454f1413d62676365ea99cabbd0 182 SUPERFAMILY SSF50447 13 100 1.34E-23 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XDD1_1208 f054a454f1413d62676365ea99cabbd0 182 SUPERFAMILY SSF50346 106 182 9.03E-20 T 15-10-2018 IPR011033 PRC-barrel-like superfamily XDD1_1208 f054a454f1413d62676365ea99cabbd0 182 Gene3D G3DSA:2.30.30.240 101 182 1.7E-32 T 15-10-2018 XDD1_3966 f8f5a32c1881331d13c13720e08617f8 254 SUPERFAMILY SSF55729 22 177 1.52E-7 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_3966 f8f5a32c1881331d13c13720e08617f8 254 Gene3D G3DSA:3.40.630.30 49 215 5.5E-29 T 15-10-2018 XDD1_1895 e65a76694db2e2c96311dbc1592de2b0 451 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 4.2E-139 T 15-10-2018 IPR010263 Type VI secretion protein, VC_A0114 XDD1_1895 e65a76694db2e2c96311dbc1592de2b0 451 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 441 1.2E-146 T 15-10-2018 IPR010263 Type VI secretion protein, VC_A0114 XDD1_0334 5c813e6bbb282ab86ca6613e1b556bab 506 SUPERFAMILY SSF103473 5 494 1.96E-63 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0334 5c813e6bbb282ab86ca6613e1b556bab 506 Pfam PF07690 Major Facilitator Superfamily 18 412 6.0E-52 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0334 5c813e6bbb282ab86ca6613e1b556bab 506 PRINTS PR01036 Tetracycline resistance protein TetB signature 204 222 2.6E-5 T 15-10-2018 XDD1_0334 5c813e6bbb282ab86ca6613e1b556bab 506 PRINTS PR01036 Tetracycline resistance protein TetB signature 108 128 2.6E-5 T 15-10-2018 XDD1_0334 5c813e6bbb282ab86ca6613e1b556bab 506 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 2.6E-5 T 15-10-2018 XDD1_0334 5c813e6bbb282ab86ca6613e1b556bab 506 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 2.6E-5 T 15-10-2018 XDD1_0334 5c813e6bbb282ab86ca6613e1b556bab 506 Gene3D G3DSA:1.20.1720.10 14 220 3.5E-46 T 15-10-2018 XDD1_0334 5c813e6bbb282ab86ca6613e1b556bab 506 Gene3D G3DSA:1.20.1250.20 268 506 5.2E-13 T 15-10-2018 XDD1_0334 5c813e6bbb282ab86ca6613e1b556bab 506 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 494 1.1E-174 T 15-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 Pfam PF00009 Elongation factor Tu GTP binding domain 424 581 1.3E-34 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 ProSitePatterns PS01176 Initiation factor 2 signature. 871 893 - T 15-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 336 920 4.1E-289 T 15-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 5.6E-9 T 15-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 344 394 4.0E-15 T 15-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 SUPERFAMILY SSF50447 594 675 2.29E-22 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 Pfam PF11987 Translation-initiation factor 2 705 810 1.2E-35 T 15-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 Gene3D G3DSA:2.40.30.10 591 709 1.1E-38 T 15-10-2018 XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 Gene3D G3DSA:3.40.50.300 418 590 2.3E-72 T 15-10-2018 XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 SUPERFAMILY SSF52156 698 827 4.58E-37 T 15-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 Gene3D G3DSA:2.40.30.10 822 919 1.2E-34 T 15-10-2018 XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 SUPERFAMILY SSF50447 821 918 2.16E-34 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 SUPERFAMILY SSF46955 3 50 6.04E-12 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 Gene3D G3DSA:3.30.56.50 2 50 3.1E-25 T 15-10-2018 XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 60 98 4.2E-16 T 15-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 Gene3D G3DSA:3.40.50.10050 714 821 1.4E-36 T 15-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 SUPERFAMILY SSF52540 417 587 1.14E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 423 578 9.9E-33 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 Pfam PF03144 Elongation factor Tu domain 2 841 908 3.0E-7 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XDD1_0478 cf773aa2fa7c8630fafb1ff04662af73 921 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 918 17.606 T 15-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 XDD1_0980 6875b78edaaaac17da6c0b0e671f4183 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 3.5E-23 T 15-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 XDD1_0980 6875b78edaaaac17da6c0b0e671f4183 251 SUPERFAMILY SSF56281 1 251 1.83E-68 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XDD1_0980 6875b78edaaaac17da6c0b0e671f4183 251 Pfam PF00753 Metallo-beta-lactamase superfamily 13 165 5.4E-18 T 15-10-2018 IPR001279 Metallo-beta-lactamase XDD1_0980 6875b78edaaaac17da6c0b0e671f4183 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 44.429 T 15-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 XDD1_0980 6875b78edaaaac17da6c0b0e671f4183 251 SMART SM00849 11 165 1.5E-35 T 15-10-2018 IPR001279 Metallo-beta-lactamase XDD1_0980 6875b78edaaaac17da6c0b0e671f4183 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 2.6E-99 T 15-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 XDD1_0980 6875b78edaaaac17da6c0b0e671f4183 251 Gene3D G3DSA:3.60.15.10 1 251 3.2E-95 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XDD1_0980 6875b78edaaaac17da6c0b0e671f4183 251 PIRSF PIRSF005457 1 251 7.2E-87 T 15-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 XDD1_2570 71b327638358f71a6fa9c3cd908c444f 557 Gene3D G3DSA:3.40.50.970 362 557 5.4E-59 T 15-10-2018 XDD1_2570 71b327638358f71a6fa9c3cd908c444f 557 Gene3D G3DSA:3.40.50.1220 212 337 1.1E-44 T 15-10-2018 XDD1_2570 71b327638358f71a6fa9c3cd908c444f 557 PIRSF PIRSF004983 1 557 1.9E-180 T 15-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 XDD1_2570 71b327638358f71a6fa9c3cd908c444f 557 SUPERFAMILY SSF52518 367 552 7.03E-33 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_2570 71b327638358f71a6fa9c3cd908c444f 557 Gene3D G3DSA:3.40.50.970 1 196 3.3E-61 T 15-10-2018 XDD1_2570 71b327638358f71a6fa9c3cd908c444f 557 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 554 32.415 T 15-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 XDD1_2570 71b327638358f71a6fa9c3cd908c444f 557 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 416 535 4.7E-9 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 XDD1_2570 71b327638358f71a6fa9c3cd908c444f 557 Pfam PF16582 Middle domain of thiamine pyrophosphate 183 389 2.2E-84 T 15-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 XDD1_2570 71b327638358f71a6fa9c3cd908c444f 557 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 140 8.1E-26 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 XDD1_2570 71b327638358f71a6fa9c3cd908c444f 557 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 431 4.7E-140 T 15-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 XDD1_2570 71b327638358f71a6fa9c3cd908c444f 557 SUPERFAMILY SSF52518 7 175 3.04E-31 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold XDD1_3214 594679fead581e5f871133c5d0f21afe 763 Gene3D G3DSA:3.20.20.210 391 758 0.0 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XDD1_3214 594679fead581e5f871133c5d0f21afe 763 PIRSF PIRSF000382 6 763 0.0 T 15-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XDD1_3214 594679fead581e5f871133c5d0f21afe 763 SUPERFAMILY SSF51726 398 758 7.33E-121 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XDD1_3214 594679fead581e5f871133c5d0f21afe 763 SUPERFAMILY SSF51726 9 396 1.06E-114 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XDD1_3214 594679fead581e5f871133c5d0f21afe 763 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 433 755 2.0E-159 T 15-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XDD1_3214 594679fead581e5f871133c5d0f21afe 763 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 7 760 37.652 T 15-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XDD1_3214 594679fead581e5f871133c5d0f21afe 763 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 9 317 1.1E-129 T 15-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XDD1_3214 594679fead581e5f871133c5d0f21afe 763 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 12 759 0.0 T 15-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XDD1_3214 594679fead581e5f871133c5d0f21afe 763 Gene3D G3DSA:3.20.20.210 11 526 0.0 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XDD1_3525 0367fe07d2bf4ee0bcaf22062c42484d 197 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 7 188 2.3E-50 T 15-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 XDD1_3525 0367fe07d2bf4ee0bcaf22062c42484d 197 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 13 189 3.9E-54 T 15-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related XDD1_3525 0367fe07d2bf4ee0bcaf22062c42484d 197 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 191 26.086 T 15-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 XDD1_3525 0367fe07d2bf4ee0bcaf22062c42484d 197 Gene3D G3DSA:2.60.450.10 60 197 2.6E-46 T 15-10-2018 XDD1_3525 0367fe07d2bf4ee0bcaf22062c42484d 197 PIRSF PIRSF028513 1 192 1.7E-32 T 15-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 XDD1_3659 32e6c88858efa62417aa4bfb1f9b3acf 67 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 4 61 6.4E-31 T 15-10-2018 IPR012658 Conserved hypothetical protein CHP02443 XDD1_3659 32e6c88858efa62417aa4bfb1f9b3acf 67 Pfam PF09526 Probable metal-binding protein (DUF2387) 5 60 2.4E-21 T 15-10-2018 IPR012658 Conserved hypothetical protein CHP02443 XDD1_3049 97e9058d9adf5fc7c810456bff512c6c 266 SUPERFAMILY SSF46689 17 131 1.61E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3049 97e9058d9adf5fc7c810456bff512c6c 266 Pfam PF13592 Winged helix-turn helix 100 155 2.2E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_3049 97e9058d9adf5fc7c810456bff512c6c 266 Pfam PF13358 DDE superfamily endonuclease 169 252 7.4E-10 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_3049 97e9058d9adf5fc7c810456bff512c6c 266 Pfam PF13551 Winged helix-turn helix 32 88 1.2E-8 T 15-10-2018 XDD1_3806 512df66213b37b66e048a68d938b763c 693 SMART SM00490 505 589 5.3E-23 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_3806 512df66213b37b66e048a68d938b763c 693 Pfam PF17191 RecG wedge domain 14 172 4.3E-18 T 15-10-2018 IPR033454 RecG, wedge domain XDD1_3806 512df66213b37b66e048a68d938b763c 693 SUPERFAMILY SSF52540 292 653 7.33E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3806 512df66213b37b66e048a68d938b763c 693 SUPERFAMILY SSF50249 9 175 6.0E-41 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_3806 512df66213b37b66e048a68d938b763c 693 Pfam PF00270 DEAD/DEAH box helicase 291 433 3.6E-19 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XDD1_3806 512df66213b37b66e048a68d938b763c 693 Pfam PF00271 Helicase conserved C-terminal domain 481 588 3.6E-17 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_3806 512df66213b37b66e048a68d938b763c 693 Gene3D G3DSA:2.40.50.140 47 142 6.8E-14 T 15-10-2018 XDD1_3806 512df66213b37b66e048a68d938b763c 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 1.1E-244 T 15-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 XDD1_3806 512df66213b37b66e048a68d938b763c 693 SMART SM00487 265 459 1.3E-30 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XDD1_3806 512df66213b37b66e048a68d938b763c 693 Gene3D G3DSA:3.40.50.300 457 630 8.3E-52 T 15-10-2018 XDD1_3806 512df66213b37b66e048a68d938b763c 693 Gene3D G3DSA:3.40.50.300 208 450 3.2E-81 T 15-10-2018 XDD1_3806 512df66213b37b66e048a68d938b763c 693 SUPERFAMILY SSF52540 205 453 7.92E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0767 9f30b38c966d1bc20eb6b32b7f8c54a6 378 Gene3D G3DSA:1.20.140.10 234 378 3.0E-36 T 15-10-2018 XDD1_0767 9f30b38c966d1bc20eb6b32b7f8c54a6 378 SUPERFAMILY SSF47203 227 376 1.1E-38 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 XDD1_0767 9f30b38c966d1bc20eb6b32b7f8c54a6 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 216 1.1E-23 T 15-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 XDD1_0767 9f30b38c966d1bc20eb6b32b7f8c54a6 378 Gene3D G3DSA:2.40.110.10 120 233 2.3E-39 T 15-10-2018 XDD1_0767 9f30b38c966d1bc20eb6b32b7f8c54a6 378 Gene3D G3DSA:1.10.540.10 6 119 2.5E-25 T 15-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 XDD1_0767 9f30b38c966d1bc20eb6b32b7f8c54a6 378 SUPERFAMILY SSF56645 9 239 7.2E-71 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 XDD1_0767 9f30b38c966d1bc20eb6b32b7f8c54a6 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 117 5.3E-25 T 15-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 XDD1_0767 9f30b38c966d1bc20eb6b32b7f8c54a6 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 15-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 XDD1_0767 9f30b38c966d1bc20eb6b32b7f8c54a6 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 376 9.8E-34 T 15-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 XDD1_0362 8856a5cb5b08ecaa5265723a475b2025 246 Gene3D G3DSA:3.40.50.10090 32 165 3.7E-65 T 15-10-2018 XDD1_0362 8856a5cb5b08ecaa5265723a475b2025 246 Gene3D G3DSA:3.40.50.10090 4 245 3.7E-65 T 15-10-2018 XDD1_0362 8856a5cb5b08ecaa5265723a475b2025 246 SUPERFAMILY SSF69618 1 245 1.7E-54 T 15-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XDD1_0362 8856a5cb5b08ecaa5265723a475b2025 246 Pfam PF02602 Uroporphyrinogen-III synthase HemD 13 243 3.9E-38 T 15-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XDD1_2251 d4c3aa923396e0d44b11a378a3b77a3e 339 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 3.7E-17 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 XDD1_2251 d4c3aa923396e0d44b11a378a3b77a3e 339 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 3.7E-17 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 XDD1_2251 d4c3aa923396e0d44b11a378a3b77a3e 339 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 3.7E-17 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 XDD1_2251 d4c3aa923396e0d44b11a378a3b77a3e 339 Pfam PF00710 Asparaginase, N-terminal 6 192 1.7E-63 T 15-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 XDD1_2251 d4c3aa923396e0d44b11a378a3b77a3e 339 SMART SM00870 5 323 1.5E-132 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 XDD1_2251 d4c3aa923396e0d44b11a378a3b77a3e 339 PIRSF PIRSF001220 1 334 7.8E-95 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 XDD1_2251 d4c3aa923396e0d44b11a378a3b77a3e 339 SUPERFAMILY SSF53774 3 335 1.83E-110 T 15-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 XDD1_2251 d4c3aa923396e0d44b11a378a3b77a3e 339 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 15-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 XDD1_2251 d4c3aa923396e0d44b11a378a3b77a3e 339 PIRSF PIRSF500176 2 332 3.7E-109 T 15-10-2018 XDD1_2251 d4c3aa923396e0d44b11a378a3b77a3e 339 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 2.6E-119 T 15-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 XDD1_2251 d4c3aa923396e0d44b11a378a3b77a3e 339 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 15-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 XDD1_2251 d4c3aa923396e0d44b11a378a3b77a3e 339 Gene3D G3DSA:3.40.50.40 209 336 3.9E-46 T 15-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 XDD1_2251 d4c3aa923396e0d44b11a378a3b77a3e 339 Gene3D G3DSA:3.40.50.1170 1 208 6.4E-88 T 15-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 XDD1_3634 fc784bcc3b1dc208cd8ceb3ab67118b1 518 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 101 264 1.6E-60 T 15-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain XDD1_3634 fc784bcc3b1dc208cd8ceb3ab67118b1 518 Gene3D G3DSA:3.10.650.10 99 271 5.8E-51 T 15-10-2018 XDD1_3634 fc784bcc3b1dc208cd8ceb3ab67118b1 518 SUPERFAMILY SSF161098 265 507 1.96E-59 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_3634 fc784bcc3b1dc208cd8ceb3ab67118b1 518 SUPERFAMILY SSF160964 16 264 3.79E-80 T 15-10-2018 XDD1_3634 fc784bcc3b1dc208cd8ceb3ab67118b1 518 Gene3D G3DSA:1.10.3720.10 274 518 3.3E-74 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_3634 fc784bcc3b1dc208cd8ceb3ab67118b1 518 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 300 505 2.0E-22 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_3634 fc784bcc3b1dc208cd8ceb3ab67118b1 518 Gene3D G3DSA:2.40.430.10 119 208 5.8E-51 T 15-10-2018 XDD1_3634 fc784bcc3b1dc208cd8ceb3ab67118b1 518 Gene3D G3DSA:1.20.58.370 2 96 1.4E-34 T 15-10-2018 IPR035277 MalF, N-terminal XDD1_3241 8baa0d1b595b3bb696ae769bffd2c784 182 Pfam PF04586 Caudovirus prohead serine protease 8 163 6.2E-47 T 15-10-2018 IPR006433 Prohead protease XDD1_3241 8baa0d1b595b3bb696ae769bffd2c784 182 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 18 160 7.2E-41 T 15-10-2018 IPR006433 Prohead protease XDD1_0776 f5345b4a0aa5d259f32b47c2406cb765 317 SUPERFAMILY SSF51569 1 316 6.59E-115 T 15-10-2018 XDD1_0776 f5345b4a0aa5d259f32b47c2406cb765 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 7.4E-161 T 15-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 XDD1_0776 f5345b4a0aa5d259f32b47c2406cb765 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 15-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 XDD1_0776 f5345b4a0aa5d259f32b47c2406cb765 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 313 3.5E-101 T 15-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 XDD1_0776 f5345b4a0aa5d259f32b47c2406cb765 317 Hamap MF_00492 Transaldolase [tal]. 2 317 51.339 T 15-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 XDD1_0776 f5345b4a0aa5d259f32b47c2406cb765 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 15-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 XDD1_0776 f5345b4a0aa5d259f32b47c2406cb765 317 Gene3D G3DSA:3.20.20.70 2 317 5.9E-147 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_1029 78541f2a413f3acdc7ffbca1995c0c94 345 Gene3D G3DSA:3.40.50.720 154 289 2.5E-97 T 15-10-2018 XDD1_1029 78541f2a413f3acdc7ffbca1995c0c94 345 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 128 1.8E-28 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XDD1_1029 78541f2a413f3acdc7ffbca1995c0c94 345 Pfam PF00107 Zinc-binding dehydrogenase 177 293 2.5E-22 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XDD1_1029 78541f2a413f3acdc7ffbca1995c0c94 345 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 XDD1_1029 78541f2a413f3acdc7ffbca1995c0c94 345 SMART SM00829 8 343 0.0023 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XDD1_1029 78541f2a413f3acdc7ffbca1995c0c94 345 SUPERFAMILY SSF51735 138 308 1.55E-37 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1029 78541f2a413f3acdc7ffbca1995c0c94 345 Gene3D G3DSA:3.90.180.10 14 330 2.5E-97 T 15-10-2018 XDD1_1029 78541f2a413f3acdc7ffbca1995c0c94 345 SUPERFAMILY SSF50129 1 155 9.74E-55 T 15-10-2018 IPR011032 GroES-like superfamily XDD1_3489 f6c346bf60859a95d2a776f9e623c1df 233 Pfam PF02678 Pirin 5 119 5.4E-22 T 15-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 XDD1_3489 f6c346bf60859a95d2a776f9e623c1df 233 PIRSF PIRSF006232 1 230 1.8E-27 T 15-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 XDD1_3489 f6c346bf60859a95d2a776f9e623c1df 233 Gene3D G3DSA:2.60.120.10 134 232 2.1E-27 T 15-10-2018 IPR014710 RmlC-like jelly roll fold XDD1_3489 f6c346bf60859a95d2a776f9e623c1df 233 Gene3D G3DSA:2.60.120.10 12 133 9.2E-39 T 15-10-2018 IPR014710 RmlC-like jelly roll fold XDD1_3489 f6c346bf60859a95d2a776f9e623c1df 233 SUPERFAMILY SSF51182 1 231 1.3E-43 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily XDD1_2468 f59ee4e79c5dcec363982065e89adbd1 277 Pfam PF01471 Putative peptidoglycan binding domain 216 267 5.7E-9 T 15-10-2018 IPR002477 Peptidoglycan binding-like XDD1_2468 f59ee4e79c5dcec363982065e89adbd1 277 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 45 181 2.5E-26 T 15-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XDD1_2468 f59ee4e79c5dcec363982065e89adbd1 277 SMART SM00644 35 180 6.6E-25 T 15-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XDD1_2468 f59ee4e79c5dcec363982065e89adbd1 277 Gene3D G3DSA:1.10.101.10 195 277 1.5E-29 T 15-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 XDD1_2468 f59ee4e79c5dcec363982065e89adbd1 277 SUPERFAMILY SSF47090 201 276 9.61E-21 T 15-10-2018 IPR036365 PGBD-like superfamily XDD1_2468 f59ee4e79c5dcec363982065e89adbd1 277 SUPERFAMILY SSF55846 34 196 4.32E-48 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XDD1_2468 f59ee4e79c5dcec363982065e89adbd1 277 Gene3D G3DSA:3.40.80.10 45 194 4.5E-47 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XDD1_0466 c7a4a90d9b5491d620a947f0f192dce0 80 Gene3D G3DSA:1.10.8.1250 11 80 5.8E-19 T 15-10-2018 IPR038296 Antitoxin ParD superfamily XDD1_0466 c7a4a90d9b5491d620a947f0f192dce0 80 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 5 71 3.4E-25 T 15-10-2018 IPR022789 Antitoxin ParD XDD1_0466 c7a4a90d9b5491d620a947f0f192dce0 80 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 65 5.2E-19 T 15-10-2018 IPR022789 Antitoxin ParD XDD1_0466 c7a4a90d9b5491d620a947f0f192dce0 80 SUPERFAMILY SSF47598 4 45 1.78E-9 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XDD1_0461 13f22fab0a073e242becd0ec00ac33b9 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 24.702 T 15-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0461 13f22fab0a073e242becd0ec00ac33b9 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.8E-40 T 15-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0461 13f22fab0a073e242becd0ec00ac33b9 102 SUPERFAMILY SSF141091 1 101 2.22E-38 T 15-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0461 13f22fab0a073e242becd0ec00ac33b9 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 4.3E-45 T 15-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0461 13f22fab0a073e242becd0ec00ac33b9 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 15-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_2291 65a795a729a8bffa4f1cea545daa4ba6 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 4.8E-214 T 15-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 XDD1_2291 65a795a729a8bffa4f1cea545daa4ba6 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 XDD1_2291 65a795a729a8bffa4f1cea545daa4ba6 369 SUPERFAMILY SSF50129 1 185 1.46E-68 T 15-10-2018 IPR011032 GroES-like superfamily XDD1_2291 65a795a729a8bffa4f1cea545daa4ba6 369 SUPERFAMILY SSF50129 318 369 2.04E-11 T 15-10-2018 IPR011032 GroES-like superfamily XDD1_2291 65a795a729a8bffa4f1cea545daa4ba6 369 Gene3D G3DSA:3.90.180.10 6 364 6.5E-146 T 15-10-2018 XDD1_2291 65a795a729a8bffa4f1cea545daa4ba6 369 Gene3D G3DSA:3.40.50.720 174 312 6.5E-146 T 15-10-2018 XDD1_2291 65a795a729a8bffa4f1cea545daa4ba6 369 SUPERFAMILY SSF51735 161 334 1.29E-45 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2291 65a795a729a8bffa4f1cea545daa4ba6 369 Pfam PF00107 Zinc-binding dehydrogenase 197 329 5.0E-22 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XDD1_2291 65a795a729a8bffa4f1cea545daa4ba6 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 1.1E-25 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XDD1_2291 65a795a729a8bffa4f1cea545daa4ba6 369 SMART SM00829 10 367 1.8E-4 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XDD1_0064 c18ea2c6469542ede8088cf1ced4bff3 229 Gene3D G3DSA:2.40.33.20 1 229 4.0E-75 T 15-10-2018 XDD1_0064 c18ea2c6469542ede8088cf1ced4bff3 229 Pfam PF03475 3-alpha domain 168 208 1.9E-13 T 15-10-2018 IPR005163 3-alpha domain XDD1_0064 c18ea2c6469542ede8088cf1ced4bff3 229 Pfam PF03473 MOSC domain 46 159 1.9E-19 T 15-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 XDD1_0064 c18ea2c6469542ede8088cf1ced4bff3 229 SUPERFAMILY SSF50800 4 223 2.98E-72 T 15-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily XDD1_3930 32a86879d9ed2a13e58d78e00f2a0c44 266 Pfam PF13592 Winged helix-turn helix 100 155 2.2E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_3930 32a86879d9ed2a13e58d78e00f2a0c44 266 SUPERFAMILY SSF46689 17 131 1.61E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3930 32a86879d9ed2a13e58d78e00f2a0c44 266 Pfam PF13551 Winged helix-turn helix 32 88 1.2E-8 T 15-10-2018 XDD1_3930 32a86879d9ed2a13e58d78e00f2a0c44 266 Pfam PF13358 DDE superfamily endonuclease 169 238 3.2E-7 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_3919 847412b6e7beee17c1fa28f8c5824a26 95 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 6 95 4.6E-46 T 15-10-2018 IPR009359 Phenylacetic acid degradation B XDD1_3919 847412b6e7beee17c1fa28f8c5824a26 95 PIRSF PIRSF030200 1 95 2.4E-41 T 15-10-2018 IPR009359 Phenylacetic acid degradation B XDD1_3919 847412b6e7beee17c1fa28f8c5824a26 95 Gene3D G3DSA:3.10.20.520 1 65 3.2E-30 T 15-10-2018 IPR038693 Phenylacetyl-CoA epoxidase, subunit B XDD1_3919 847412b6e7beee17c1fa28f8c5824a26 95 Pfam PF06243 Phenylacetic acid degradation B 5 91 4.8E-39 T 15-10-2018 IPR009359 Phenylacetic acid degradation B XDD1_0613 d2a5b51d9a4d1feb7a6ad00d976bad0f 404 Gene3D G3DSA:3.40.50.1110 72 394 2.4E-100 T 15-10-2018 IPR036514 SGNH hydrolase superfamily XDD1_0613 d2a5b51d9a4d1feb7a6ad00d976bad0f 404 SUPERFAMILY SSF52266 74 402 6.41E-29 T 15-10-2018 XDD1_0613 d2a5b51d9a4d1feb7a6ad00d976bad0f 404 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 237 388 8.5E-16 T 15-10-2018 IPR013830 SGNH hydrolase-type esterase domain XDD1_0613 d2a5b51d9a4d1feb7a6ad00d976bad0f 404 Gene3D G3DSA:2.60.120.1360 105 234 2.4E-100 T 15-10-2018 XDD1_3531 d2a64693ff56250504bb01f276fd4650 283 SUPERFAMILY SSF52540 2 151 2.96E-13 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3531 d2a64693ff56250504bb01f276fd4650 283 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 41.139 T 15-10-2018 IPR005337 RapZ-like family GO:0005524 XDD1_3531 d2a64693ff56250504bb01f276fd4650 283 PIRSF PIRSF005052 1 283 1.0E-113 T 15-10-2018 IPR005337 RapZ-like family GO:0005524 XDD1_3531 d2a64693ff56250504bb01f276fd4650 283 Pfam PF03668 P-loop ATPase protein family 1 282 3.2E-144 T 15-10-2018 IPR005337 RapZ-like family GO:0005524 XDD1_1969 91c8c6ceb2733eb7b112a656dd8ef6c0 301 Gene3D G3DSA:3.40.50.1980 121 298 4.4E-42 T 15-10-2018 XDD1_1969 91c8c6ceb2733eb7b112a656dd8ef6c0 301 SUPERFAMILY SSF53807 32 294 1.92E-48 T 15-10-2018 XDD1_1969 91c8c6ceb2733eb7b112a656dd8ef6c0 301 Pfam PF01497 Periplasmic binding protein 34 270 1.5E-15 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain XDD1_1969 91c8c6ceb2733eb7b112a656dd8ef6c0 301 Gene3D G3DSA:3.40.50.1980 22 119 2.2E-17 T 15-10-2018 XDD1_3254 d56472510c8b8658c229c8f848f84fe1 342 SUPERFAMILY SSF51395 24 334 1.99E-73 T 15-10-2018 XDD1_3254 d56472510c8b8658c229c8f848f84fe1 342 Gene3D G3DSA:3.20.20.70 22 263 1.7E-71 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_3254 d56472510c8b8658c229c8f848f84fe1 342 Pfam PF01207 Dihydrouridine synthase (Dus) 27 333 8.6E-95 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 XDD1_3254 d56472510c8b8658c229c8f848f84fe1 342 PIRSF PIRSF006621 13 340 4.5E-73 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 XDD1_3254 d56472510c8b8658c229c8f848f84fe1 342 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 19 340 52.825 T 15-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 XDD1_3254 d56472510c8b8658c229c8f848f84fe1 342 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 24 339 1.3E-166 T 15-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 XDD1_3254 d56472510c8b8658c229c8f848f84fe1 342 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 105 123 - T 15-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 XDD1_3254 d56472510c8b8658c229c8f848f84fe1 342 Gene3D G3DSA:1.20.120.1460 269 342 1.7E-23 T 15-10-2018 XDD1_3015 036cafb86d0f3188e9673ca69e12daae 271 Gene3D G3DSA:3.10.20.310 58 126 2.6E-32 T 15-10-2018 XDD1_3015 036cafb86d0f3188e9673ca69e12daae 271 Gene3D G3DSA:3.40.50.11690 127 258 8.6E-45 T 15-10-2018 XDD1_3015 036cafb86d0f3188e9673ca69e12daae 271 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 26 252 24.082 T 15-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 XDD1_3015 036cafb86d0f3188e9673ca69e12daae 271 Pfam PF08478 POTRA domain, FtsQ-type 57 126 1.1E-20 T 15-10-2018 IPR013685 POTRA domain, FtsQ-type XDD1_3015 036cafb86d0f3188e9673ca69e12daae 271 Pfam PF03799 Cell division protein FtsQ 130 244 9.0E-25 T 15-10-2018 IPR005548 Cell division protein FtsQ/DivIB XDD1_0396 662985114e6c496bca4bfe8d1d558ea3 401 SUPERFAMILY SSF103473 8 400 1.28E-36 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0396 662985114e6c496bca4bfe8d1d558ea3 401 Gene3D G3DSA:1.20.1250.20 215 401 2.3E-16 T 15-10-2018 XDD1_0396 662985114e6c496bca4bfe8d1d558ea3 401 Pfam PF05977 Transmembrane secretion effector 18 387 9.7E-26 T 15-10-2018 IPR010290 Transmembrane secretion effector XDD1_0396 662985114e6c496bca4bfe8d1d558ea3 401 Gene3D G3DSA:1.20.1250.20 8 194 2.0E-10 T 15-10-2018 XDD1_3025 b92ec2f8e53199bc07ef7518b2cd7540 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 21 102 1.5E-26 T 15-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 XDD1_3025 b92ec2f8e53199bc07ef7518b2cd7540 105 Pfam PF04999 Cell division protein FtsL 9 103 8.3E-32 T 15-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 XDD1_3025 b92ec2f8e53199bc07ef7518b2cd7540 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 16.625 T 15-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 XDD1_2659 f7cbd73ef55eb6d9d6b53ff2337fdaec 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 1.1E-16 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 XDD1_2659 f7cbd73ef55eb6d9d6b53ff2337fdaec 304 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 6.3E-110 T 15-10-2018 IPR010099 Epimerase family protein SDR39U1 XDD1_2659 f7cbd73ef55eb6d9d6b53ff2337fdaec 304 SUPERFAMILY SSF51735 1 298 2.73E-42 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2659 f7cbd73ef55eb6d9d6b53ff2337fdaec 304 Gene3D G3DSA:3.40.50.720 2 302 7.3E-77 T 15-10-2018 XDD1_2659 f7cbd73ef55eb6d9d6b53ff2337fdaec 304 Pfam PF08338 Domain of unknown function (DUF1731) 250 296 1.6E-19 T 15-10-2018 IPR013549 Domain of unknown function DUF1731 XDD1_0443 974e430fb5c278377fc0e9bc413936b1 147 Pfam PF15970 HicB_like antitoxin of bacterial toxin-antitoxin system 6 85 3.3E-15 T 15-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system XDD1_0443 974e430fb5c278377fc0e9bc413936b1 147 SUPERFAMILY SSF143100 4 64 8.5E-9 T 15-10-2018 IPR035069 TTHA1013/TTHA0281-like XDD1_0443 974e430fb5c278377fc0e9bc413936b1 147 Gene3D G3DSA:3.30.160.250 4 78 9.8E-7 T 15-10-2018 XDD1_0355 1e973b52c51ce228fbfcd83f9b720bf3 369 SUPERFAMILY SSF53756 66 276 7.33E-5 T 15-10-2018 XDD1_0355 1e973b52c51ce228fbfcd83f9b720bf3 369 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 365 5.1E-173 T 15-10-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 XDD1_0355 1e973b52c51ce228fbfcd83f9b720bf3 369 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 369 63.18 T 15-10-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 XDD1_2223 95ed79b01db0f250e582308132922a57 568 Pfam PF00916 Sulfate permease family 24 388 6.6E-85 T 15-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 XDD1_2223 95ed79b01db0f250e582308132922a57 568 SUPERFAMILY SSF52091 444 536 1.37E-7 T 15-10-2018 IPR036513 STAS domain superfamily XDD1_2223 95ed79b01db0f250e582308132922a57 568 Gene3D G3DSA:3.30.750.24 435 564 7.9E-17 T 15-10-2018 IPR036513 STAS domain superfamily XDD1_2223 95ed79b01db0f250e582308132922a57 568 Pfam PF01740 STAS domain 444 539 4.2E-12 T 15-10-2018 IPR002645 STAS domain XDD1_0989 a6e9a431fdc62899adde84a022195bbc 388 Pfam PF00162 Phosphoglycerate kinase 6 373 4.1E-139 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0989 a6e9a431fdc62899adde84a022195bbc 388 SUPERFAMILY SSF53748 3 383 4.24E-143 T 15-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0989 a6e9a431fdc62899adde84a022195bbc 388 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.101 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0989 a6e9a431fdc62899adde84a022195bbc 388 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.5E-82 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0989 a6e9a431fdc62899adde84a022195bbc 388 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.5E-82 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0989 a6e9a431fdc62899adde84a022195bbc 388 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 1.5E-82 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0989 a6e9a431fdc62899adde84a022195bbc 388 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 1.5E-82 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0989 a6e9a431fdc62899adde84a022195bbc 388 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.5E-82 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0989 a6e9a431fdc62899adde84a022195bbc 388 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.5E-82 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0989 a6e9a431fdc62899adde84a022195bbc 388 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.5E-82 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0989 a6e9a431fdc62899adde84a022195bbc 388 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.5E-82 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0989 a6e9a431fdc62899adde84a022195bbc 388 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 1.5E-82 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0989 a6e9a431fdc62899adde84a022195bbc 388 Gene3D G3DSA:3.40.50.1260 165 373 3.3E-154 T 15-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0989 a6e9a431fdc62899adde84a022195bbc 388 PIRSF PIRSF000724 1 388 3.4E-134 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0989 a6e9a431fdc62899adde84a022195bbc 388 Gene3D G3DSA:3.40.50.1260 10 378 3.3E-154 T 15-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0989 a6e9a431fdc62899adde84a022195bbc 388 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 15-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_1748 8b73472cbc9872885e57f3ff95d6d993 698 SMART SM00228 267 344 8.6E-10 T 15-10-2018 IPR001478 PDZ domain GO:0005515 XDD1_1748 8b73472cbc9872885e57f3ff95d6d993 698 SUPERFAMILY SSF50156 240 361 2.53E-15 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 XDD1_1748 8b73472cbc9872885e57f3ff95d6d993 698 Pfam PF03572 Peptidase family S41 377 550 4.6E-51 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XDD1_1748 8b73472cbc9872885e57f3ff95d6d993 698 Gene3D G3DSA:2.30.42.10 257 341 1.2E-12 T 15-10-2018 XDD1_1748 8b73472cbc9872885e57f3ff95d6d993 698 Gene3D G3DSA:3.90.226.10 344 569 6.1E-54 T 15-10-2018 XDD1_1748 8b73472cbc9872885e57f3ff95d6d993 698 SMART SM00245 347 552 1.7E-73 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XDD1_1748 8b73472cbc9872885e57f3ff95d6d993 698 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 261 340 4.1E-14 T 15-10-2018 IPR001478 PDZ domain GO:0005515 XDD1_1748 8b73472cbc9872885e57f3ff95d6d993 698 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 221 572 2.8E-119 T 15-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 XDD1_1748 8b73472cbc9872885e57f3ff95d6d993 698 SUPERFAMILY SSF52096 207 556 2.15E-67 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XDD1_1748 8b73472cbc9872885e57f3ff95d6d993 698 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 558 688 3.2E-38 T 15-10-2018 IPR020992 Tail specific protease, C-terminal XDD1_1482 a1c32a1ad4391dfc89f0c22174db2cf5 174 Gene3D G3DSA:2.30.110.20 3 34 3.5E-8 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_1482 a1c32a1ad4391dfc89f0c22174db2cf5 174 Gene3D G3DSA:2.30.110.20 35 96 7.5E-11 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_1482 a1c32a1ad4391dfc89f0c22174db2cf5 174 SUPERFAMILY SSF141452 30 91 2.35E-10 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_3052 00cddd4d1681e5a961a7685c2adebf67 446 Pfam PF01554 MatE 242 402 2.7E-25 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XDD1_3052 00cddd4d1681e5a961a7685c2adebf67 446 Pfam PF01554 MatE 17 177 5.1E-27 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XDD1_3052 00cddd4d1681e5a961a7685c2adebf67 446 PIRSF PIRSF006603 2 446 7.6E-77 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XDD1_3052 00cddd4d1681e5a961a7685c2adebf67 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 416 5.9E-62 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XDD1_3013 9ea3dc30afed67eb759a35e6475c5f03 387 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 15-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 XDD1_3013 9ea3dc30afed67eb759a35e6475c5f03 387 SUPERFAMILY SSF52490 12 207 1.31E-70 T 15-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 XDD1_3013 9ea3dc30afed67eb759a35e6475c5f03 387 SUPERFAMILY SSF55307 203 319 1.08E-42 T 15-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 XDD1_3013 9ea3dc30afed67eb759a35e6475c5f03 387 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 356 38.306 T 15-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 XDD1_3013 9ea3dc30afed67eb759a35e6475c5f03 387 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 330 7.2E-142 T 15-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 XDD1_3013 9ea3dc30afed67eb759a35e6475c5f03 387 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 1.9E-42 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XDD1_3013 9ea3dc30afed67eb759a35e6475c5f03 387 SMART SM00865 206 324 8.6E-56 T 15-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 XDD1_3013 9ea3dc30afed67eb759a35e6475c5f03 387 Gene3D G3DSA:3.40.50.1440 9 316 1.2E-117 T 15-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 XDD1_3013 9ea3dc30afed67eb759a35e6475c5f03 387 SMART SM00864 12 204 4.0E-113 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XDD1_3013 9ea3dc30afed67eb759a35e6475c5f03 387 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 15-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 XDD1_3013 9ea3dc30afed67eb759a35e6475c5f03 387 PRINTS PR00423 Cell division protein FtsZ signature 188 210 7.0E-52 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XDD1_3013 9ea3dc30afed67eb759a35e6475c5f03 387 PRINTS PR00423 Cell division protein FtsZ signature 97 117 7.0E-52 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XDD1_3013 9ea3dc30afed67eb759a35e6475c5f03 387 PRINTS PR00423 Cell division protein FtsZ signature 125 146 7.0E-52 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XDD1_3013 9ea3dc30afed67eb759a35e6475c5f03 387 PRINTS PR00423 Cell division protein FtsZ signature 211 232 7.0E-52 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XDD1_3013 9ea3dc30afed67eb759a35e6475c5f03 387 Pfam PF12327 FtsZ family, C-terminal domain 221 315 2.2E-37 T 15-10-2018 IPR024757 Cell division protein FtsZ, C-terminal XDD1_2424 8907a9b7e6577b45eae2de91f571f947 235 Gene3D G3DSA:1.10.8.60 169 235 1.0E-26 T 15-10-2018 XDD1_2424 8907a9b7e6577b45eae2de91f571f947 235 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 133 160 1.2E-6 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like XDD1_2424 8907a9b7e6577b45eae2de91f571f947 235 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 45 65 1.2E-6 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like XDD1_2424 8907a9b7e6577b45eae2de91f571f947 235 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 8 234 1.1E-82 T 15-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 XDD1_2424 8907a9b7e6577b45eae2de91f571f947 235 Gene3D G3DSA:3.40.50.300 2 166 2.2E-34 T 15-10-2018 XDD1_2424 8907a9b7e6577b45eae2de91f571f947 235 SUPERFAMILY SSF52540 19 214 6.28E-23 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2424 8907a9b7e6577b45eae2de91f571f947 235 Pfam PF00308 Bacterial dnaA protein 18 213 2.0E-17 T 15-10-2018 IPR013317 Chromosomal replication initiator protein DnaA XDD1_2424 8907a9b7e6577b45eae2de91f571f947 235 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 7 235 55.501 T 15-10-2018 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae XDD1_1919 292f328e348a0b2be615180a992a151a 166 Pfam PF07883 Cupin domain 51 120 6.6E-16 T 15-10-2018 IPR013096 Cupin 2, conserved barrel XDD1_1919 292f328e348a0b2be615180a992a151a 166 Gene3D G3DSA:2.60.120.10 30 149 4.6E-29 T 15-10-2018 IPR014710 RmlC-like jelly roll fold XDD1_1919 292f328e348a0b2be615180a992a151a 166 SUPERFAMILY SSF51182 33 137 9.13E-23 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily XDD1_2144 713cbdbf3c5b3f1e202c3082c3d6ec43 1018 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 470 502 3.7E-10 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat XDD1_2144 713cbdbf3c5b3f1e202c3082c3d6ec43 1018 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 345 355 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site XDD1_2144 713cbdbf3c5b3f1e202c3082c3d6ec43 1018 Gene3D G3DSA:2.40.128.130 694 1018 9.5E-77 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily XDD1_2144 713cbdbf3c5b3f1e202c3082c3d6ec43 1018 Pfam PF03797 Autotransporter beta-domain 748 998 1.9E-61 T 15-10-2018 IPR005546 Autotransporter beta-domain XDD1_2144 713cbdbf3c5b3f1e202c3082c3d6ec43 1018 Pfam PF12951 Passenger-associated-transport-repeat 471 501 1.3E-7 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat XDD1_2144 713cbdbf3c5b3f1e202c3082c3d6ec43 1018 PRINTS PR00723 Subtilisin serine protease family (S8) signature 70 89 9.2E-12 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related XDD1_2144 713cbdbf3c5b3f1e202c3082c3d6ec43 1018 PRINTS PR00723 Subtilisin serine protease family (S8) signature 113 126 9.2E-12 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related XDD1_2144 713cbdbf3c5b3f1e202c3082c3d6ec43 1018 PRINTS PR00723 Subtilisin serine protease family (S8) signature 344 360 9.2E-12 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related XDD1_2144 713cbdbf3c5b3f1e202c3082c3d6ec43 1018 SUPERFAMILY SSF103515 703 1018 4.18E-68 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily XDD1_2144 713cbdbf3c5b3f1e202c3082c3d6ec43 1018 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 540 1018 1.0E-64 T 15-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 XDD1_2144 713cbdbf3c5b3f1e202c3082c3d6ec43 1018 SMART SM00869 745 1008 3.1E-52 T 15-10-2018 IPR005546 Autotransporter beta-domain XDD1_2144 713cbdbf3c5b3f1e202c3082c3d6ec43 1018 Pfam PF00082 Subtilase family 70 395 3.2E-42 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 XDD1_2144 713cbdbf3c5b3f1e202c3082c3d6ec43 1018 SUPERFAMILY SSF52743 51 407 1.44E-59 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 XDD1_0802 bb83f66fb3c2bd9e413fd352b895424f 129 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 95 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 XDD1_0802 bb83f66fb3c2bd9e413fd352b895424f 129 Gene3D G3DSA:3.40.140.10 5 129 3.6E-29 T 15-10-2018 XDD1_0802 bb83f66fb3c2bd9e413fd352b895424f 129 SUPERFAMILY SSF53927 27 123 2.07E-24 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 XDD1_0802 bb83f66fb3c2bd9e413fd352b895424f 129 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 25 103 1.5E-8 T 15-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain XDD1_3429 77008e1232e790837cf5d996825b8dce 111 Pfam PF10761 Protein of unknown function (DUF2590) 7 105 3.0E-45 T 15-10-2018 IPR019697 Bacteriophage HP1, Orf28 XDD1_2841 77008e1232e790837cf5d996825b8dce 111 Pfam PF10761 Protein of unknown function (DUF2590) 7 105 3.0E-45 T 15-10-2018 IPR019697 Bacteriophage HP1, Orf28 XDD1_2099 0f65da9936f0efbd1feef24d7b2d59db 132 Pfam PF07027 Protein of unknown function (DUF1318) 47 132 7.1E-30 T 15-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 XDD1_2099 0f65da9936f0efbd1feef24d7b2d59db 132 PIRSF PIRSF025560 20 132 2.1E-36 T 15-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 XDD1_0998 d356a4c17fca55525b11dac1c7c62b5e 193 Gene3D G3DSA:2.30.110.10 1 193 2.0E-57 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 XDD1_0998 d356a4c17fca55525b11dac1c7c62b5e 193 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 22 98 3.5E-17 T 15-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XDD1_0998 d356a4c17fca55525b11dac1c7c62b5e 193 PIRSF PIRSF000190 1 193 2.1E-56 T 15-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XDD1_0998 d356a4c17fca55525b11dac1c7c62b5e 193 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 2 193 5.3E-52 T 15-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XDD1_0998 d356a4c17fca55525b11dac1c7c62b5e 193 SUPERFAMILY SSF50475 3 193 1.09E-49 T 15-10-2018 XDD1_0998 d356a4c17fca55525b11dac1c7c62b5e 193 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 153 193 1.4E-10 T 15-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XDD1_0483 a202bdc89513ca1aadf24cbe6548ad7f 294 SMART SM00028 234 267 410.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XDD1_0483 a202bdc89513ca1aadf24cbe6548ad7f 294 SMART SM00028 62 95 10.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XDD1_0483 a202bdc89513ca1aadf24cbe6548ad7f 294 SMART SM00028 96 129 3.2E-4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XDD1_0483 a202bdc89513ca1aadf24cbe6548ad7f 294 SUPERFAMILY SSF48452 27 283 9.02E-70 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_0483 a202bdc89513ca1aadf24cbe6548ad7f 294 Gene3D G3DSA:1.25.40.10 20 294 5.9E-111 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_0483 a202bdc89513ca1aadf24cbe6548ad7f 294 PIRSF PIRSF004654 1 292 1.2E-111 T 15-10-2018 IPR023605 Lipoprotein NlpI XDD1_3874 696d6cc9faebade9f6ffbb54e3e7d045 173 SUPERFAMILY SSF53098 41 165 4.81E-35 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3874 696d6cc9faebade9f6ffbb54e3e7d045 173 Pfam PF00665 Integrase core domain 49 162 2.5E-30 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_3874 696d6cc9faebade9f6ffbb54e3e7d045 173 Gene3D G3DSA:3.30.420.10 46 172 2.2E-14 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_1142 27ee7e8c1706c48d60c1e0c6434d7b77 161 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 20 159 1.8E-42 T 15-10-2018 IPR005247 YbhB/YbcL XDD1_1142 27ee7e8c1706c48d60c1e0c6434d7b77 161 Gene3D G3DSA:3.90.280.10 1 161 2.7E-52 T 15-10-2018 IPR036610 PEBP-like superfamily XDD1_1142 27ee7e8c1706c48d60c1e0c6434d7b77 161 SUPERFAMILY SSF49777 7 161 1.2E-49 T 15-10-2018 IPR036610 PEBP-like superfamily XDD1_1142 27ee7e8c1706c48d60c1e0c6434d7b77 161 Pfam PF01161 Phosphatidylethanolamine-binding protein 20 159 3.8E-37 T 15-10-2018 IPR008914 Phosphatidylethanolamine-binding protein XDD1_1635 fb97da7baf3740b36f21a978093c84b2 690 Gene3D G3DSA:1.10.10.160 312 417 6.0E-47 T 15-10-2018 IPR013986 DExx box DNA helicase domain superfamily XDD1_1635 fb97da7baf3740b36f21a978093c84b2 690 Pfam PF13361 UvrD-like helicase C-terminal domain 543 665 3.0E-13 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 XDD1_1635 fb97da7baf3740b36f21a978093c84b2 690 Pfam PF00580 UvrD/REP helicase N-terminal domain 203 489 1.3E-37 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 XDD1_1635 fb97da7baf3740b36f21a978093c84b2 690 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 5.2E-64 T 15-10-2018 IPR022161 DNA helicase IV, N-terminal domain XDD1_1635 fb97da7baf3740b36f21a978093c84b2 690 Gene3D G3DSA:3.40.50.300 203 496 6.0E-47 T 15-10-2018 XDD1_1635 fb97da7baf3740b36f21a978093c84b2 690 Gene3D G3DSA:3.40.50.300 505 682 3.2E-25 T 15-10-2018 XDD1_1635 fb97da7baf3740b36f21a978093c84b2 690 SUPERFAMILY SSF52540 195 681 2.41E-77 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2895 e8bde6549e510076d0664bfabf14661c 406 Pfam PF07690 Major Facilitator Superfamily 29 337 6.8E-40 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_2895 e8bde6549e510076d0664bfabf14661c 406 Gene3D G3DSA:1.20.1250.20 24 219 1.7E-26 T 15-10-2018 XDD1_2895 e8bde6549e510076d0664bfabf14661c 406 SUPERFAMILY SSF103473 20 390 6.15E-51 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_2895 e8bde6549e510076d0664bfabf14661c 406 Gene3D G3DSA:1.20.1250.20 220 393 5.8E-19 T 15-10-2018 XDD1_2013 a9ed2f7a84e6110c3b3f841e04f75269 270 SUPERFAMILY SSF55961 3 142 4.62E-23 T 15-10-2018 XDD1_2013 a9ed2f7a84e6110c3b3f841e04f75269 270 Gene3D G3DSA:3.30.720.110 214 270 9.8E-29 T 15-10-2018 XDD1_2013 a9ed2f7a84e6110c3b3f841e04f75269 270 SUPERFAMILY SSF54593 159 267 3.52E-16 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XDD1_2013 a9ed2f7a84e6110c3b3f841e04f75269 270 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 159 264 2.4E-6 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain XDD1_2013 a9ed2f7a84e6110c3b3f841e04f75269 270 Gene3D G3DSA:3.30.530.20 1 142 1.1E-24 T 15-10-2018 IPR023393 START-like domain superfamily XDD1_2013 a9ed2f7a84e6110c3b3f841e04f75269 270 Gene3D G3DSA:3.30.720.120 143 202 1.4E-27 T 15-10-2018 XDD1_3203 c7f7bbfeaf3cc6d3db18b8629c6fcd95 251 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 4 251 2.4E-120 T 15-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 XDD1_3203 c7f7bbfeaf3cc6d3db18b8629c6fcd95 251 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 64 79 - T 15-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 XDD1_3203 c7f7bbfeaf3cc6d3db18b8629c6fcd95 251 Gene3D G3DSA:3.40.50.1580 1 251 8.3E-80 T 15-10-2018 XDD1_3203 c7f7bbfeaf3cc6d3db18b8629c6fcd95 251 Pfam PF01048 Phosphorylase superfamily 19 225 1.6E-40 T 15-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 XDD1_3203 c7f7bbfeaf3cc6d3db18b8629c6fcd95 251 SUPERFAMILY SSF53167 4 247 4.32E-72 T 15-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 XDD1_1778 117bc6b63495dc2765d6f5871556a6ed 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 2.7E-17 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_1778 117bc6b63495dc2765d6f5871556a6ed 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 2.7E-17 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_1778 117bc6b63495dc2765d6f5871556a6ed 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 2.7E-17 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_1778 117bc6b63495dc2765d6f5871556a6ed 98 SMART SM00411 3 92 5.1E-42 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_1778 117bc6b63495dc2765d6f5871556a6ed 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.748 T 15-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 XDD1_1778 117bc6b63495dc2765d6f5871556a6ed 98 SUPERFAMILY SSF47729 3 92 1.15E-30 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XDD1_1778 117bc6b63495dc2765d6f5871556a6ed 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 15-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 XDD1_1778 117bc6b63495dc2765d6f5871556a6ed 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 96 7.8E-52 T 15-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 XDD1_1778 117bc6b63495dc2765d6f5871556a6ed 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.4E-30 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_1778 117bc6b63495dc2765d6f5871556a6ed 98 Gene3D G3DSA:4.10.520.10 1 98 1.9E-37 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XDD1_1031 3295f6070740fb62a98d5955995382d3 533 Pfam PF00668 Condensation domain 19 428 1.8E-31 T 15-10-2018 IPR001242 Condensation domain XDD1_1031 3295f6070740fb62a98d5955995382d3 533 SUPERFAMILY SSF56801 439 517 1.2E-13 T 15-10-2018 XDD1_1031 3295f6070740fb62a98d5955995382d3 533 Pfam PF00501 AMP-binding enzyme 438 518 5.3E-11 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_1031 3295f6070740fb62a98d5955995382d3 533 Gene3D G3DSA:2.30.38.10 441 519 3.8E-20 T 15-10-2018 XDD1_1031 3295f6070740fb62a98d5955995382d3 533 SUPERFAMILY SSF52777 179 411 1.47E-13 T 15-10-2018 XDD1_1031 3295f6070740fb62a98d5955995382d3 533 SUPERFAMILY SSF52777 12 165 7.56E-23 T 15-10-2018 XDD1_1031 3295f6070740fb62a98d5955995382d3 533 Gene3D G3DSA:3.30.559.10 11 177 1.1E-21 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XDD1_1031 3295f6070740fb62a98d5955995382d3 533 Gene3D G3DSA:3.30.559.30 178 433 2.8E-18 T 15-10-2018 XDD1_3510 74d16416cf28f9f11e2eaa43a8ec9d79 142 Gene3D G3DSA:3.90.1180.10 1 142 6.2E-66 T 15-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 XDD1_3510 74d16416cf28f9f11e2eaa43a8ec9d79 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 15-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 XDD1_3510 74d16416cf28f9f11e2eaa43a8ec9d79 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 5.0E-68 T 15-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3510 74d16416cf28f9f11e2eaa43a8ec9d79 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 29.029 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 XDD1_3510 74d16416cf28f9f11e2eaa43a8ec9d79 142 SUPERFAMILY SSF52161 1 140 1.83E-61 T 15-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 XDD1_3510 74d16416cf28f9f11e2eaa43a8ec9d79 142 Pfam PF00572 Ribosomal protein L13 15 138 1.8E-57 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 XDD1_3510 74d16416cf28f9f11e2eaa43a8ec9d79 142 PIRSF PIRSF002181 1 142 2.2E-52 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 XDD1_2368 7c7e4174351b0b3fba4d507cfe6039ec 129 Pfam PF00072 Response regulator receiver domain 9 120 1.8E-32 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_2368 7c7e4174351b0b3fba4d507cfe6039ec 129 SMART SM00448 6 120 1.3E-35 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_2368 7c7e4174351b0b3fba4d507cfe6039ec 129 Gene3D G3DSA:3.40.50.2300 1 127 9.4E-39 T 15-10-2018 XDD1_2368 7c7e4174351b0b3fba4d507cfe6039ec 129 SUPERFAMILY SSF52172 5 125 1.57E-36 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_3413 187c3eeae1c926a93120851ac87b2a83 219 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 195 1.2E-78 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 XDD1_3413 187c3eeae1c926a93120851ac87b2a83 219 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.718 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 XDD1_3413 187c3eeae1c926a93120851ac87b2a83 219 SMART SM01207 10 185 9.2E-88 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 XDD1_3413 187c3eeae1c926a93120851ac87b2a83 219 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 1.3E-51 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 XDD1_3519 d0bb5d9bb8f9ecd2b7380776229d14b8 174 Pfam PF02470 MlaD protein 39 115 2.4E-19 T 15-10-2018 IPR003399 Mce/MlaD XDD1_3519 d0bb5d9bb8f9ecd2b7380776229d14b8 174 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 2 152 6.7E-56 T 15-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 XDD1_2027 55b1dde00c009a939c5d7bbb7e3969e3 202 Gene3D G3DSA:3.40.630.30 10 191 2.8E-43 T 15-10-2018 XDD1_2027 55b1dde00c009a939c5d7bbb7e3969e3 202 SUPERFAMILY SSF55729 13 186 2.85E-39 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_2027 55b1dde00c009a939c5d7bbb7e3969e3 202 Pfam PF13302 Acetyltransferase (GNAT) domain 27 162 2.3E-16 T 15-10-2018 IPR000182 GNAT domain XDD1_0731 eead0d6337e07bb66af90dd6b0fce43b 259 SMART SM01133 10 246 2.3E-77 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 XDD1_0731 eead0d6337e07bb66af90dd6b0fce43b 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 53.551 T 15-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 XDD1_0731 eead0d6337e07bb66af90dd6b0fce43b 259 Gene3D G3DSA:3.20.20.70 1 259 1.8E-100 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_0731 eead0d6337e07bb66af90dd6b0fce43b 259 SUPERFAMILY SSF51569 6 246 5.02E-80 T 15-10-2018 XDD1_0731 eead0d6337e07bb66af90dd6b0fce43b 259 PIRSF PIRSF001357 5 255 1.5E-76 T 15-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 XDD1_0731 eead0d6337e07bb66af90dd6b0fce43b 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 231 8.3E-78 T 15-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 XDD1_0731 eead0d6337e07bb66af90dd6b0fce43b 259 Pfam PF01791 DeoC/LacD family aldolase 12 241 2.1E-44 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 XDD1_2541 ee2f88411d55d1e609d8a04cc2558f77 335 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 6.5E-98 T 15-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 XDD1_2541 ee2f88411d55d1e609d8a04cc2558f77 335 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 44.999 T 15-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 XDD1_1290 2338f42035123e478478f37a187d39c4 292 Pfam PF03471 Transporter associated domain 206 280 1.2E-21 T 15-10-2018 IPR005170 Transporter-associated domain XDD1_1290 2338f42035123e478478f37a187d39c4 292 SUPERFAMILY SSF56176 202 284 9.82E-23 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XDD1_1290 2338f42035123e478478f37a187d39c4 292 Pfam PF00571 CBS domain 68 122 3.8E-8 T 15-10-2018 IPR000644 CBS domain XDD1_1290 2338f42035123e478478f37a187d39c4 292 Pfam PF00571 CBS domain 140 188 1.9E-5 T 15-10-2018 IPR000644 CBS domain XDD1_1290 2338f42035123e478478f37a187d39c4 292 SUPERFAMILY SSF54631 65 200 3.54E-32 T 15-10-2018 XDD1_1290 2338f42035123e478478f37a187d39c4 292 SMART SM00116 77 126 8.1 T 15-10-2018 IPR000644 CBS domain XDD1_1290 2338f42035123e478478f37a187d39c4 292 SMART SM00116 140 188 0.91 T 15-10-2018 IPR000644 CBS domain XDD1_1290 2338f42035123e478478f37a187d39c4 292 SMART SM01091 204 282 1.3E-27 T 15-10-2018 IPR005170 Transporter-associated domain XDD1_1290 2338f42035123e478478f37a187d39c4 292 Gene3D G3DSA:3.30.465.10 197 291 3.0E-31 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 XDD1_1290 2338f42035123e478478f37a187d39c4 292 Gene3D G3DSA:3.10.580.10 50 196 1.2E-56 T 15-10-2018 XDD1_2587 60eb4230bcacfe1fd834cf24ea2fd335 176 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 158 1.5E-31 T 15-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2587 60eb4230bcacfe1fd834cf24ea2fd335 176 Gene3D G3DSA:1.20.120.1200 1 160 2.1E-46 T 15-10-2018 XDD1_1891 182e24621533b3cca48cf1a9df5184ea 182 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 10 160 5.3E-58 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 XDD1_1891 182e24621533b3cca48cf1a9df5184ea 182 PIRSF PIRSF028301 1 178 3.7E-60 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 XDD1_1891 182e24621533b3cca48cf1a9df5184ea 182 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 161 4.5E-57 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 XDD1_0774 1991c9309dc0526bd3b3dfc98630a946 213 Pfam PF12840 Helix-turn-helix domain 11 70 2.5E-9 T 15-10-2018 XDD1_0774 1991c9309dc0526bd3b3dfc98630a946 213 Gene3D G3DSA:1.10.10.10 2 98 2.5E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0774 1991c9309dc0526bd3b3dfc98630a946 213 SMART SM00418 12 90 4.6E-13 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XDD1_0774 1991c9309dc0526bd3b3dfc98630a946 213 SMART SM00450 112 208 1.5E-19 T 15-10-2018 IPR001763 Rhodanese-like domain XDD1_0774 1991c9309dc0526bd3b3dfc98630a946 213 Gene3D G3DSA:3.40.250.10 99 212 2.2E-26 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily XDD1_0774 1991c9309dc0526bd3b3dfc98630a946 213 Pfam PF00581 Rhodanese-like domain 115 205 5.2E-14 T 15-10-2018 IPR001763 Rhodanese-like domain XDD1_0774 1991c9309dc0526bd3b3dfc98630a946 213 SUPERFAMILY SSF46785 5 132 4.15E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_0774 1991c9309dc0526bd3b3dfc98630a946 213 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 3.6E-7 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XDD1_0774 1991c9309dc0526bd3b3dfc98630a946 213 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 14 29 3.6E-7 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XDD1_0774 1991c9309dc0526bd3b3dfc98630a946 213 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 46 61 3.6E-7 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XDD1_0774 1991c9309dc0526bd3b3dfc98630a946 213 SUPERFAMILY SSF52821 107 211 3.8E-28 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily XDD1_0119 f73c75fb238623dcb0e471e132323a99 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 11 151 1.4E-49 T 15-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 XDD1_0119 f73c75fb238623dcb0e471e132323a99 152 Gene3D G3DSA:2.70.40.10 1 151 6.5E-54 T 15-10-2018 IPR036157 dUTPase-like superfamily XDD1_0119 f73c75fb238623dcb0e471e132323a99 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 7 151 34.257 T 15-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 XDD1_0119 f73c75fb238623dcb0e471e132323a99 152 SUPERFAMILY SSF51283 1 151 4.97E-56 T 15-10-2018 IPR036157 dUTPase-like superfamily XDD1_0119 f73c75fb238623dcb0e471e132323a99 152 Pfam PF00692 dUTPase 17 150 4.5E-44 T 15-10-2018 IPR029054 dUTPase-like XDD1_1817 f97b192c422460d977d8f61002d77bd9 231 SUPERFAMILY SSF52038 140 202 4.84E-6 T 15-10-2018 IPR035905 Barstar-like superfamily XDD1_1817 f97b192c422460d977d8f61002d77bd9 231 Pfam PF01337 Barstar (barnase inhibitor) 143 201 4.7E-5 T 15-10-2018 IPR000468 Barstar (barnase inhibitor) XDD1_3766 199f524a251b8c50f5bcaf31719d6016 172 Gene3D G3DSA:2.30.110.20 2 172 6.3E-67 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_3766 199f524a251b8c50f5bcaf31719d6016 172 SUPERFAMILY SSF141452 3 169 1.7E-39 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_3766 199f524a251b8c50f5bcaf31719d6016 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 1.4E-64 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_3766 199f524a251b8c50f5bcaf31719d6016 172 Pfam PF05638 Type VI secretion system effector, Hcp 9 155 3.2E-32 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_3453 a1c22ab7b1102d055cd2232d1864f955 118 Pfam PF17282 Family of unknown function (DUF5347) 15 116 1.7E-40 T 15-10-2018 IPR035232 Protein of unknown function DUF5347 XDD1_3453 a1c22ab7b1102d055cd2232d1864f955 118 ProDom PD073252 TRANSPOSABLE STY4640 FELS-2 RETRON ORFC C0938 ELEMENT STY3664 EC67 PHAGE-RELATED 15 104 2.0E-15 T 15-10-2018 IPR035232 Protein of unknown function DUF5347 XDD1_2866 a1c22ab7b1102d055cd2232d1864f955 118 Pfam PF17282 Family of unknown function (DUF5347) 15 116 1.7E-40 T 15-10-2018 IPR035232 Protein of unknown function DUF5347 XDD1_2866 a1c22ab7b1102d055cd2232d1864f955 118 ProDom PD073252 TRANSPOSABLE STY4640 FELS-2 RETRON ORFC C0938 ELEMENT STY3664 EC67 PHAGE-RELATED 15 104 2.0E-15 T 15-10-2018 IPR035232 Protein of unknown function DUF5347 XDD1_0775 8332026b00e2625202895867339e5e1a 192 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 15-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 XDD1_0775 8332026b00e2625202895867339e5e1a 192 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 147 2.1E-39 T 15-10-2018 IPR001453 MoaB/Mog domain XDD1_0775 8332026b00e2625202895867339e5e1a 192 SUPERFAMILY SSF53218 4 188 2.49E-47 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily XDD1_0775 8332026b00e2625202895867339e5e1a 192 Gene3D G3DSA:3.40.980.10 1 192 2.5E-63 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily XDD1_0775 8332026b00e2625202895867339e5e1a 192 Pfam PF00994 Probable molybdopterin binding domain 8 147 1.1E-27 T 15-10-2018 IPR001453 MoaB/Mog domain XDD1_0775 8332026b00e2625202895867339e5e1a 192 SMART SM00852 7 153 1.9E-21 T 15-10-2018 IPR001453 MoaB/Mog domain XDD1_0976 ad1d82b79e9f496bae42096e7064ccdd 331 Gene3D G3DSA:3.60.15.10 32 327 7.2E-101 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XDD1_0976 ad1d82b79e9f496bae42096e7064ccdd 331 SUPERFAMILY SSF56281 33 323 4.32E-54 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XDD1_0976 ad1d82b79e9f496bae42096e7064ccdd 331 SMART SM00849 94 300 2.6E-23 T 15-10-2018 IPR001279 Metallo-beta-lactamase XDD1_0976 ad1d82b79e9f496bae42096e7064ccdd 331 Pfam PF00753 Metallo-beta-lactamase superfamily 93 281 1.9E-19 T 15-10-2018 IPR001279 Metallo-beta-lactamase XDD1_0294 bf0af95ac98061fd7871219a69c70135 130 Gene3D G3DSA:3.30.1490.10 73 130 3.6E-25 T 15-10-2018 XDD1_0294 bf0af95ac98061fd7871219a69c70135 130 Pfam PF00410 Ribosomal protein S8 5 129 5.6E-49 T 15-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0294 bf0af95ac98061fd7871219a69c70135 130 Gene3D G3DSA:3.30.1370.30 2 72 2.2E-29 T 15-10-2018 XDD1_0294 bf0af95ac98061fd7871219a69c70135 130 SUPERFAMILY SSF56047 2 129 7.59E-47 T 15-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0294 bf0af95ac98061fd7871219a69c70135 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 15-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0294 bf0af95ac98061fd7871219a69c70135 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.574 T 15-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XDD1_0414 115417cfa30e926746d3ef3ed7339f60 409 Gene3D G3DSA:2.40.110.10 127 222 4.5E-20 T 15-10-2018 XDD1_0414 115417cfa30e926746d3ef3ed7339f60 409 Gene3D G3DSA:1.10.540.10 22 125 2.5E-17 T 15-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 XDD1_0414 115417cfa30e926746d3ef3ed7339f60 409 Gene3D G3DSA:1.20.140.10 233 405 1.3E-18 T 15-10-2018 XDD1_0414 115417cfa30e926746d3ef3ed7339f60 409 SUPERFAMILY SSF56645 30 219 6.02E-23 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 XDD1_0414 115417cfa30e926746d3ef3ed7339f60 409 PIRSF PIRSF016578 5 406 2.8E-54 T 15-10-2018 XDD1_0162 408d5201a4a256baf8b832967dc12072 383 SUPERFAMILY SSF53756 10 381 9.42E-107 T 15-10-2018 XDD1_0162 408d5201a4a256baf8b832967dc12072 383 Gene3D G3DSA:3.40.50.2000 13 194 4.0E-106 T 15-10-2018 XDD1_0162 408d5201a4a256baf8b832967dc12072 383 Gene3D G3DSA:3.40.50.2000 195 334 4.0E-106 T 15-10-2018 XDD1_0162 408d5201a4a256baf8b832967dc12072 383 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 37 369 2.2E-90 T 15-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 XDD1_0162 408d5201a4a256baf8b832967dc12072 383 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 11 341 3.5E-72 T 15-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 XDD1_1515 c3bd4d94a2e1661e95cec9086c8c9b46 119 Pfam PF10908 Protein of unknown function (DUF2778) 22 109 1.4E-16 T 15-10-2018 IPR021225 Protein of unknown function DUF2778 XDD1_0405 c5320ca1334cbc46ecd5ba949b8096c0 459 Pfam PF07690 Major Facilitator Superfamily 30 426 2.8E-46 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0405 c5320ca1334cbc46ecd5ba949b8096c0 459 Gene3D G3DSA:1.20.1250.20 283 456 7.9E-12 T 15-10-2018 XDD1_0405 c5320ca1334cbc46ecd5ba949b8096c0 459 Gene3D G3DSA:1.20.1720.10 27 247 5.5E-36 T 15-10-2018 XDD1_0405 c5320ca1334cbc46ecd5ba949b8096c0 459 SUPERFAMILY SSF103473 4 455 2.22E-48 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1877 e50a235414eab8171dff3ea1cf1e544b 75 Pfam PF06667 Phage shock protein B 4 74 3.6E-33 T 15-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 XDD1_1877 e50a235414eab8171dff3ea1cf1e544b 75 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 4.1E-30 T 15-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 XDD1_3403 99e67f32d46a07d6b26c188ebdd4149e 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 2.5E-163 T 15-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain XDD1_3403 99e67f32d46a07d6b26c188ebdd4149e 386 SUPERFAMILY SSF52440 174 279 8.92E-41 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XDD1_3403 99e67f32d46a07d6b26c188ebdd4149e 386 Gene3D G3DSA:3.30.1490.330 263 343 2.4E-28 T 15-10-2018 XDD1_3403 99e67f32d46a07d6b26c188ebdd4149e 386 SUPERFAMILY SSF56059 1 383 2.65E-92 T 15-10-2018 XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 27 36 - T 15-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 Gene3D G3DSA:3.40.50.11260 406 496 1.2E-35 T 15-10-2018 XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 PRINTS PR00775 90kDa heat shock protein signature 7 27 2.1E-63 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 PRINTS PR00775 90kDa heat shock protein signature 28 50 2.1E-63 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 PRINTS PR00775 90kDa heat shock protein signature 95 112 2.1E-63 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 PRINTS PR00775 90kDa heat shock protein signature 192 210 2.1E-63 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 PRINTS PR00775 90kDa heat shock protein signature 77 94 2.1E-63 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 PRINTS PR00775 90kDa heat shock protein signature 174 191 2.1E-63 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 PRINTS PR00775 90kDa heat shock protein signature 122 144 2.1E-63 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 Gene3D G3DSA:3.30.565.10 2 219 5.5E-78 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 PIRSF PIRSF002583 1 631 1.6E-217 T 15-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 Gene3D G3DSA:1.20.120.790 497 628 1.5E-43 T 15-10-2018 IPR037196 HSP90, C-terminal domain XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 Pfam PF00183 Hsp90 protein 216 626 1.1E-124 T 15-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 Gene3D G3DSA:3.30.230.80 233 405 3.3E-71 T 15-10-2018 XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 Hamap MF_00505 Chaperone protein HtpG [htpG]. 4 627 32.519 T 15-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 SUPERFAMILY SSF55874 6 215 6.02E-66 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 184 3.8E-15 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 SUPERFAMILY SSF54211 234 489 1.37E-100 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 SUPERFAMILY SSF110942 514 627 3.14E-33 T 15-10-2018 IPR037196 HSP90, C-terminal domain XDD1_0908 e493bb69f485f1c1400e067a69fae3a1 631 SMART SM00387 29 186 2.3E-11 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_1575 09a30ae0c2748a07defffc98daf71dfa 96 SMART SM00411 1 91 9.3E-44 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_1575 09a30ae0c2748a07defffc98daf71dfa 96 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 15-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 XDD1_1575 09a30ae0c2748a07defffc98daf71dfa 96 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 3.1E-52 T 15-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 XDD1_1575 09a30ae0c2748a07defffc98daf71dfa 96 SUPERFAMILY SSF47729 1 91 2.06E-30 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XDD1_1575 09a30ae0c2748a07defffc98daf71dfa 96 Gene3D G3DSA:4.10.520.10 2 39 1.6E-15 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XDD1_1575 09a30ae0c2748a07defffc98daf71dfa 96 Gene3D G3DSA:4.10.520.10 40 96 3.6E-32 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XDD1_1575 09a30ae0c2748a07defffc98daf71dfa 96 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.557 T 15-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 XDD1_1575 09a30ae0c2748a07defffc98daf71dfa 96 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 9.7E-19 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_1575 09a30ae0c2748a07defffc98daf71dfa 96 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 9.7E-19 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_1575 09a30ae0c2748a07defffc98daf71dfa 96 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 9.7E-19 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_1575 09a30ae0c2748a07defffc98daf71dfa 96 Pfam PF00216 Bacterial DNA-binding protein 1 91 3.6E-30 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XDD1_2186 946f90d1f24c5f86e3435bf2f433e7f9 146 Pfam PF10754 Protein of unknown function (DUF2569) 8 143 6.3E-40 T 15-10-2018 IPR019690 Protein of unknown function DUF2569 XDD1_0834 451d4d49822663b0e21b5855406c2129 112 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 23 104 1.5E-33 T 15-10-2018 IPR003849 Preprotein translocase YajC XDD1_0834 451d4d49822663b0e21b5855406c2129 112 SMART SM01323 21 104 3.4E-40 T 15-10-2018 IPR003849 Preprotein translocase YajC XDD1_0834 451d4d49822663b0e21b5855406c2129 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 23 43 5.5E-17 T 15-10-2018 IPR003849 Preprotein translocase YajC XDD1_0834 451d4d49822663b0e21b5855406c2129 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 61 79 5.5E-17 T 15-10-2018 IPR003849 Preprotein translocase YajC XDD1_0834 451d4d49822663b0e21b5855406c2129 112 Pfam PF02699 Preprotein translocase subunit 25 101 1.2E-27 T 15-10-2018 IPR003849 Preprotein translocase YajC XDD1_3899 0bc6a77169abaa0c985c3a00ee7da8f7 498 SUPERFAMILY SSF51556 57 491 1.31E-49 T 15-10-2018 IPR032466 Metal-dependent hydrolase XDD1_3899 0bc6a77169abaa0c985c3a00ee7da8f7 498 Pfam PF00962 Adenosine/AMP deaminase 294 477 1.8E-21 T 15-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 XDD1_0725 4f1c259204bc1696ef31e2ad8bf71042 404 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 8 112 3.7E-14 T 15-10-2018 IPR017508 HipA, N-terminal subdomain 1 XDD1_0725 4f1c259204bc1696ef31e2ad8bf71042 404 Pfam PF13657 HipA N-terminal domain 8 112 3.2E-17 T 15-10-2018 IPR017508 HipA, N-terminal subdomain 1 XDD1_0725 4f1c259204bc1696ef31e2ad8bf71042 404 Pfam PF07804 HipA-like C-terminal domain 140 377 1.4E-51 T 15-10-2018 IPR012893 HipA-like, C-terminal XDD1_0725 4f1c259204bc1696ef31e2ad8bf71042 404 Gene3D G3DSA:1.10.1070.20 241 365 1.8E-8 T 15-10-2018 XDD1_0627 e67f0c4a7f3658eaf0260d795c88f0f3 197 Pfam PF02342 TerD domain 2 181 3.1E-46 T 15-10-2018 IPR003325 TerD domain XDD1_0627 e67f0c4a7f3658eaf0260d795c88f0f3 197 Gene3D G3DSA:2.60.60.30 18 183 4.4E-48 T 15-10-2018 XDD1_2525 4e7e366f6170982fc4fc5f590a0baf68 280 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 15-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 XDD1_2525 4e7e366f6170982fc4fc5f590a0baf68 280 Gene3D G3DSA:3.20.20.150 1 280 4.1E-112 T 15-10-2018 XDD1_2525 4e7e366f6170982fc4fc5f590a0baf68 280 Pfam PF01261 Xylose isomerase-like TIM barrel 20 239 8.1E-45 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain XDD1_2525 4e7e366f6170982fc4fc5f590a0baf68 280 SUPERFAMILY SSF51658 1 278 5.89E-103 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily XDD1_2525 4e7e366f6170982fc4fc5f590a0baf68 280 SMART SM00518 3 279 1.3E-130 T 15-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 XDD1_2525 4e7e366f6170982fc4fc5f590a0baf68 280 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 43.394 T 15-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 XDD1_2525 4e7e366f6170982fc4fc5f590a0baf68 280 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 15-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 XDD1_2525 4e7e366f6170982fc4fc5f590a0baf68 280 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 276 6.8E-109 T 15-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 XDD1_1476 ad914e88c05ccd0cf44ab05824e6a785 424 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 244 281 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_1476 ad914e88c05ccd0cf44ab05824e6a785 424 Pfam PF00202 Aminotransferase class-III 29 423 1.5E-130 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_1476 ad914e88c05ccd0cf44ab05824e6a785 424 Gene3D G3DSA:3.40.640.10 63 332 9.1E-178 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_1476 ad914e88c05ccd0cf44ab05824e6a785 424 SUPERFAMILY SSF53383 3 423 3.49E-139 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_1476 ad914e88c05ccd0cf44ab05824e6a785 424 PIRSF PIRSF000521 31 141 1.8E-8 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_1476 ad914e88c05ccd0cf44ab05824e6a785 424 PIRSF PIRSF000521 129 424 2.4E-24 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_1476 ad914e88c05ccd0cf44ab05824e6a785 424 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 15 423 3.6E-188 T 15-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 XDD1_1476 ad914e88c05ccd0cf44ab05824e6a785 424 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 3 424 51.016 T 15-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 XDD1_1476 ad914e88c05ccd0cf44ab05824e6a785 424 Gene3D G3DSA:3.90.1150.10 13 417 9.1E-178 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_3282 e37dae434659d698b4b44da6afe75b77 131 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 130 29.564 T 15-10-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 XDD1_3282 e37dae434659d698b4b44da6afe75b77 131 Gene3D G3DSA:3.30.110.70 28 130 4.5E-30 T 15-10-2018 XDD1_3282 e37dae434659d698b4b44da6afe75b77 131 Pfam PF16358 RcsF lipoprotein 29 128 2.8E-42 T 15-10-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 XDD1_2141 5f11b2fe147f726623cd2534dbc962b2 248 Pfam PF13649 Methyltransferase domain 39 134 9.2E-18 T 15-10-2018 XDD1_2141 5f11b2fe147f726623cd2534dbc962b2 248 Gene3D G3DSA:2.20.25.110 142 205 2.3E-37 T 15-10-2018 XDD1_2141 5f11b2fe147f726623cd2534dbc962b2 248 Gene3D G3DSA:3.40.50.150 12 243 2.3E-37 T 15-10-2018 XDD1_2141 5f11b2fe147f726623cd2534dbc962b2 248 SUPERFAMILY SSF53335 11 246 8.97E-34 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_0009 f69a1c0f72dc20d119253df8013d88e8 377 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 271 285 - T 15-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XDD1_0009 f69a1c0f72dc20d119253df8013d88e8 377 SMART SM00859 4 131 1.3E-24 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 XDD1_0009 f69a1c0f72dc20d119253df8013d88e8 377 Gene3D G3DSA:3.40.50.720 5 366 4.5E-144 T 15-10-2018 XDD1_0009 f69a1c0f72dc20d119253df8013d88e8 377 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 377 33.429 T 15-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XDD1_0009 f69a1c0f72dc20d119253df8013d88e8 377 SUPERFAMILY SSF55347 143 364 4.58E-77 T 15-10-2018 XDD1_0009 f69a1c0f72dc20d119253df8013d88e8 377 Gene3D G3DSA:3.30.360.10 144 360 4.5E-144 T 15-10-2018 XDD1_0009 f69a1c0f72dc20d119253df8013d88e8 377 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 130 8.1E-24 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 XDD1_0009 f69a1c0f72dc20d119253df8013d88e8 377 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 3 377 3.8E-205 T 15-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XDD1_0009 f69a1c0f72dc20d119253df8013d88e8 377 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 153 363 2.8E-57 T 15-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XDD1_0009 f69a1c0f72dc20d119253df8013d88e8 377 PIRSF PIRSF000148 2 377 1.1E-68 T 15-10-2018 XDD1_0009 f69a1c0f72dc20d119253df8013d88e8 377 SUPERFAMILY SSF51735 2 156 2.89E-50 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1700 1d227d054e84998bcbd6d6774d8f6301 237 Gene3D G3DSA:2.10.109.10 101 235 8.6E-45 T 15-10-2018 XDD1_1700 1d227d054e84998bcbd6d6774d8f6301 237 SUPERFAMILY SSF47413 1 83 9.29E-20 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_1700 1d227d054e84998bcbd6d6774d8f6301 237 Pfam PF01381 Helix-turn-helix 23 73 2.1E-10 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_1700 1d227d054e84998bcbd6d6774d8f6301 237 SUPERFAMILY SSF51306 141 230 5.76E-24 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XDD1_1700 1d227d054e84998bcbd6d6774d8f6301 237 Pfam PF00717 Peptidase S24-like 148 218 2.8E-13 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C XDD1_1700 1d227d054e84998bcbd6d6774d8f6301 237 Gene3D G3DSA:1.10.260.40 1 91 1.5E-31 T 15-10-2018 XDD1_1700 1d227d054e84998bcbd6d6774d8f6301 237 SMART SM00530 15 74 3.6E-8 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_3086 ee6c223edbf889ad639aac594305728a 98 Gene3D G3DSA:1.10.3230.30 3 96 1.4E-13 T 15-10-2018 XDD1_3086 ee6c223edbf889ad639aac594305728a 98 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 7 96 7.2E-22 T 15-10-2018 IPR006450 Phage protein of unkonwn function XDD1_3086 ee6c223edbf889ad639aac594305728a 98 Pfam PF05135 Phage gp6-like head-tail connector protein 6 93 6.9E-17 T 15-10-2018 IPR021146 Phage gp6-like head-tail connector protein XDD1_0005 8c65a0cd597aa33baee2a977ecf3e5c3 109 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 1 24 9.0E-5 T 15-10-2018 XDD1_3770 25c193b24db08104810de758b3dce127 68 Gene3D G3DSA:3.30.429.10 2 65 1.1E-26 T 15-10-2018 IPR014347 Tautomerase/MIF superfamily XDD1_3770 25c193b24db08104810de758b3dce127 68 Pfam PF01361 Tautomerase enzyme 2 61 1.2E-23 T 15-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 XDD1_3770 25c193b24db08104810de758b3dce127 68 SUPERFAMILY SSF55331 2 64 4.51E-22 T 15-10-2018 IPR014347 Tautomerase/MIF superfamily XDD1_3770 25c193b24db08104810de758b3dce127 68 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 63 1.8E-28 T 15-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 XDD1_0548 51f8ac21847dded40822145d991d5281 1019 Pfam PF11924 Inverse autotransporter, beta-domain 67 343 1.1E-103 T 15-10-2018 IPR024519 Inverse autotransporter, beta-domain XDD1_0548 51f8ac21847dded40822145d991d5281 1019 SMART SM00634 672 767 0.1 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain XDD1_0548 51f8ac21847dded40822145d991d5281 1019 SMART SM00634 562 660 0.033 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain XDD1_0548 51f8ac21847dded40822145d991d5281 1019 Gene3D G3DSA:2.60.40.10 671 768 2.2E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_0548 51f8ac21847dded40822145d991d5281 1019 Gene3D G3DSA:2.60.40.10 573 666 1.3E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_0548 51f8ac21847dded40822145d991d5281 1019 SUPERFAMILY SSF49373 580 650 3.53E-6 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments XDD1_0548 51f8ac21847dded40822145d991d5281 1019 SUPERFAMILY SSF49373 685 759 6.67E-7 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments XDD1_0548 51f8ac21847dded40822145d991d5281 1019 Gene3D G3DSA:2.40.160.160 105 350 1.2E-102 T 15-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily XDD1_0548 51f8ac21847dded40822145d991d5281 1019 PRINTS PR01369 Intimin signature 195 210 7.9E-9 T 15-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 XDD1_0548 51f8ac21847dded40822145d991d5281 1019 PRINTS PR01369 Intimin signature 291 310 7.9E-9 T 15-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 XDD1_0548 51f8ac21847dded40822145d991d5281 1019 PRINTS PR01369 Intimin signature 223 242 7.9E-9 T 15-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 XDD1_3230 078518ce1cf608e2f2115647451e4a54 398 PRINTS PR00799 Aspartate aminotransferase signature 176 195 9.2E-35 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XDD1_3230 078518ce1cf608e2f2115647451e4a54 398 PRINTS PR00799 Aspartate aminotransferase signature 274 299 9.2E-35 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XDD1_3230 078518ce1cf608e2f2115647451e4a54 398 PRINTS PR00799 Aspartate aminotransferase signature 342 360 9.2E-35 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XDD1_3230 078518ce1cf608e2f2115647451e4a54 398 PRINTS PR00799 Aspartate aminotransferase signature 207 219 9.2E-35 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XDD1_3230 078518ce1cf608e2f2115647451e4a54 398 Gene3D G3DSA:3.40.640.10 60 301 5.2E-155 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_3230 078518ce1cf608e2f2115647451e4a54 398 Pfam PF00155 Aminotransferase class I and II 27 393 4.1E-83 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XDD1_3230 078518ce1cf608e2f2115647451e4a54 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 15-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 XDD1_3230 078518ce1cf608e2f2115647451e4a54 398 SUPERFAMILY SSF53383 1 395 1.21E-120 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_3230 078518ce1cf608e2f2115647451e4a54 398 Gene3D G3DSA:3.90.1150.10 11 392 5.2E-155 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_2332 a0752bcd88f4f7b22e7743152085ca59 375 PRINTS PR01010 Flagellar P-ring protein signature 131 149 1.5E-89 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 XDD1_2332 a0752bcd88f4f7b22e7743152085ca59 375 PRINTS PR01010 Flagellar P-ring protein signature 261 273 1.5E-89 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 XDD1_2332 a0752bcd88f4f7b22e7743152085ca59 375 PRINTS PR01010 Flagellar P-ring protein signature 114 131 1.5E-89 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 XDD1_2332 a0752bcd88f4f7b22e7743152085ca59 375 PRINTS PR01010 Flagellar P-ring protein signature 171 189 1.5E-89 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 XDD1_2332 a0752bcd88f4f7b22e7743152085ca59 375 PRINTS PR01010 Flagellar P-ring protein signature 197 215 1.5E-89 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 XDD1_2332 a0752bcd88f4f7b22e7743152085ca59 375 PRINTS PR01010 Flagellar P-ring protein signature 31 46 1.5E-89 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 XDD1_2332 a0752bcd88f4f7b22e7743152085ca59 375 PRINTS PR01010 Flagellar P-ring protein signature 92 111 1.5E-89 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 XDD1_2332 a0752bcd88f4f7b22e7743152085ca59 375 PRINTS PR01010 Flagellar P-ring protein signature 66 81 1.5E-89 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 XDD1_2332 a0752bcd88f4f7b22e7743152085ca59 375 PRINTS PR01010 Flagellar P-ring protein signature 46 61 1.5E-89 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 XDD1_2332 a0752bcd88f4f7b22e7743152085ca59 375 Pfam PF02119 Flagellar P-ring protein 31 374 4.0E-134 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 XDD1_2332 a0752bcd88f4f7b22e7743152085ca59 375 Hamap MF_00416 Flagellar P-ring protein [flgI]. 11 375 37.663 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 XDD1_1296 e61eebdf3c9e4b421405ff021813af88 407 Gene3D G3DSA:3.30.420.40 211 379 3.1E-89 T 15-10-2018 XDD1_1296 e61eebdf3c9e4b421405ff021813af88 407 SUPERFAMILY SSF53067 89 395 4.17E-51 T 15-10-2018 XDD1_1296 e61eebdf3c9e4b421405ff021813af88 407 SUPERFAMILY SSF46785 15 80 2.13E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1296 e61eebdf3c9e4b421405ff021813af88 407 Pfam PF00480 ROK family 89 393 3.2E-83 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 XDD1_1296 e61eebdf3c9e4b421405ff021813af88 407 Pfam PF01047 MarR family 25 64 1.4E-7 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_1296 e61eebdf3c9e4b421405ff021813af88 407 Gene3D G3DSA:3.30.420.40 94 386 3.1E-89 T 15-10-2018 XDD1_1296 e61eebdf3c9e4b421405ff021813af88 407 Gene3D G3DSA:1.10.10.10 5 81 8.5E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1587 5de8496c3e0466d3529d96632d067910 572 Pfam PF01471 Putative peptidoglycan binding domain 243 302 2.6E-9 T 15-10-2018 IPR002477 Peptidoglycan binding-like XDD1_1587 5de8496c3e0466d3529d96632d067910 572 Gene3D G3DSA:2.40.440.10 290 508 2.9E-30 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like XDD1_1587 5de8496c3e0466d3529d96632d067910 572 SUPERFAMILY SSF141523 329 488 1.57E-18 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like XDD1_1587 5de8496c3e0466d3529d96632d067910 572 Pfam PF03734 L,D-transpeptidase catalytic domain 331 497 8.3E-29 T 15-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 XDD1_1587 5de8496c3e0466d3529d96632d067910 572 SUPERFAMILY SSF47090 233 310 3.14E-14 T 15-10-2018 IPR036365 PGBD-like superfamily XDD1_0858 1af8cf4bacce31aed2909b6ea2bf8420 310 SUPERFAMILY SSF48576 15 301 1.3E-87 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily XDD1_0858 1af8cf4bacce31aed2909b6ea2bf8420 310 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 92 108 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site XDD1_0858 1af8cf4bacce31aed2909b6ea2bf8420 310 Pfam PF00348 Polyprenyl synthetase 44 281 2.0E-58 T 15-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 XDD1_0858 1af8cf4bacce31aed2909b6ea2bf8420 310 Gene3D G3DSA:1.10.600.10 13 310 1.5E-104 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily XDD1_0858 1af8cf4bacce31aed2909b6ea2bf8420 310 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 226 238 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site XDD1_1783 b3d260990deca7b79a9c0a644695dd66 553 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 5 552 41.92 T 15-10-2018 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 XDD1_1783 b3d260990deca7b79a9c0a644695dd66 553 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 13 241 2.6E-32 T 15-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 XDD1_0757 d3096cd485075cbfcc8e6188fc485a89 402 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 386 23.225 T 15-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 XDD1_0757 d3096cd485075cbfcc8e6188fc485a89 402 Pfam PF06965 Na+/H+ antiporter 1 7 379 8.9E-149 T 15-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 XDD1_0757 d3096cd485075cbfcc8e6188fc485a89 402 Gene3D G3DSA:1.20.1530.10 3 387 1.7E-152 T 15-10-2018 IPR023171 Na/H antiporter domain superfamily XDD1_0757 d3096cd485075cbfcc8e6188fc485a89 402 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 380 1.3E-171 T 15-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 XDD1_3018 2454118c6fed7cf42bc3b2668455149b 361 SUPERFAMILY SSF53756 6 353 1.55E-127 T 15-10-2018 XDD1_3018 2454118c6fed7cf42bc3b2668455149b 361 Gene3D G3DSA:3.40.50.2000 162 319 3.5E-124 T 15-10-2018 XDD1_3018 2454118c6fed7cf42bc3b2668455149b 361 Gene3D G3DSA:3.40.50.2000 9 161 3.5E-124 T 15-10-2018 XDD1_3018 2454118c6fed7cf42bc3b2668455149b 361 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 349 1.3E-113 T 15-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_3018 2454118c6fed7cf42bc3b2668455149b 361 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 333 1.3E-36 T 15-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 XDD1_3018 2454118c6fed7cf42bc3b2668455149b 361 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 6.4E-49 T 15-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_3018 2454118c6fed7cf42bc3b2668455149b 361 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 353 35.219 T 15-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_2191 9ad049519891c2a49b11d3c1c8666517 208 SMART SM00900 100 192 1.8E-33 T 15-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 XDD1_2191 9ad049519891c2a49b11d3c1c8666517 208 Pfam PF04205 FMN-binding domain 100 187 1.9E-18 T 15-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 XDD1_2191 9ad049519891c2a49b11d3c1c8666517 208 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 26.737 T 15-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 XDD1_2191 9ad049519891c2a49b11d3c1c8666517 208 PIRSF PIRSF006091 1 205 4.7E-75 T 15-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 XDD1_2191 9ad049519891c2a49b11d3c1c8666517 208 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 1.9E-66 T 15-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 XDD1_0205 e760cf7c16dd88fa086f774ea5c5cd36 295 Gene3D G3DSA:3.40.190.290 92 293 4.4E-53 T 15-10-2018 XDD1_0205 e760cf7c16dd88fa086f774ea5c5cd36 295 SUPERFAMILY SSF46785 3 112 8.17E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_0205 e760cf7c16dd88fa086f774ea5c5cd36 295 Gene3D G3DSA:1.10.10.10 4 90 1.2E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0205 e760cf7c16dd88fa086f774ea5c5cd36 295 Pfam PF03466 LysR substrate binding domain 90 293 1.3E-39 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_0205 e760cf7c16dd88fa086f774ea5c5cd36 295 SUPERFAMILY SSF53850 91 293 4.34E-38 T 15-10-2018 XDD1_0205 e760cf7c16dd88fa086f774ea5c5cd36 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.7E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_3868 c851f8604c0ad3d5d68161740db41a3d 79 SUPERFAMILY SSF46785 1 69 2.27E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3868 c851f8604c0ad3d5d68161740db41a3d 79 Pfam PF09012 FeoC like transcriptional regulator 4 71 5.5E-19 T 15-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC XDD1_3868 c851f8604c0ad3d5d68161740db41a3d 79 Gene3D G3DSA:1.10.10.10 1 76 9.7E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3868 c851f8604c0ad3d5d68161740db41a3d 79 Hamap MF_01586 Probable [Fe-S]-dependent transcriptional repressor [feoC]. 1 76 24.019 T 15-10-2018 IPR023732 Probable [Fe-S]-dependent transcriptional repressor XDD1_1211 b03474569a6ef10474e515afbc7b5293 471 Gene3D G3DSA:1.20.200.10 75 427 2.9E-80 T 15-10-2018 XDD1_1211 b03474569a6ef10474e515afbc7b5293 471 Gene3D G3DSA:1.10.40.30 330 415 2.9E-80 T 15-10-2018 XDD1_1211 b03474569a6ef10474e515afbc7b5293 471 PRINTS PR00145 Argininosuccinate lyase family signature 246 262 8.1E-23 T 15-10-2018 XDD1_1211 b03474569a6ef10474e515afbc7b5293 471 PRINTS PR00145 Argininosuccinate lyase family signature 161 177 8.1E-23 T 15-10-2018 XDD1_1211 b03474569a6ef10474e515afbc7b5293 471 PRINTS PR00145 Argininosuccinate lyase family signature 201 225 8.1E-23 T 15-10-2018 XDD1_1211 b03474569a6ef10474e515afbc7b5293 471 PRINTS PR00145 Argininosuccinate lyase family signature 110 130 8.1E-23 T 15-10-2018 XDD1_1211 b03474569a6ef10474e515afbc7b5293 471 PRINTS PR00145 Argininosuccinate lyase family signature 69 91 8.1E-23 T 15-10-2018 XDD1_1211 b03474569a6ef10474e515afbc7b5293 471 SUPERFAMILY SSF48557 7 438 1.54E-68 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 XDD1_1211 b03474569a6ef10474e515afbc7b5293 471 PRINTS PR00149 Fumarate lyase superfamily signature 201 228 6.9E-13 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_1211 b03474569a6ef10474e515afbc7b5293 471 PRINTS PR00149 Fumarate lyase superfamily signature 115 133 6.9E-13 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_1211 b03474569a6ef10474e515afbc7b5293 471 PRINTS PR00149 Fumarate lyase superfamily signature 70 88 6.9E-13 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_1211 b03474569a6ef10474e515afbc7b5293 471 PRINTS PR00149 Fumarate lyase superfamily signature 246 262 6.9E-13 T 15-10-2018 IPR000362 Fumarate lyase family XDD1_1211 b03474569a6ef10474e515afbc7b5293 471 Pfam PF00206 Lyase 68 271 3.0E-30 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal XDD1_0840 c060b6eec4f662dbcef1bce3afb2a51f 138 Pfam PF01029 NusB family 7 129 9.8E-35 T 15-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 XDD1_0840 c060b6eec4f662dbcef1bce3afb2a51f 138 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 4 135 23.143 T 15-10-2018 IPR011605 NusB antitermination factor GO:0006353 XDD1_0840 c060b6eec4f662dbcef1bce3afb2a51f 138 SUPERFAMILY SSF48013 3 131 3.53E-41 T 15-10-2018 IPR035926 NusB-like superfamily XDD1_0840 c060b6eec4f662dbcef1bce3afb2a51f 138 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 130 7.9E-44 T 15-10-2018 IPR011605 NusB antitermination factor GO:0006353 XDD1_0840 c060b6eec4f662dbcef1bce3afb2a51f 138 Gene3D G3DSA:1.10.940.10 1 138 6.7E-50 T 15-10-2018 IPR035926 NusB-like superfamily XDD1_3259 70beeebd6060be46941969c597714adb 822 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 802 0.0 T 15-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 XDD1_3259 70beeebd6060be46941969c597714adb 822 PIRSF PIRSF500064 2 817 0.0 T 15-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 XDD1_3259 70beeebd6060be46941969c597714adb 822 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 810 32.291 T 15-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 XDD1_3259 70beeebd6060be46941969c597714adb 822 Pfam PF01553 Acyltransferase 284 426 4.0E-26 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XDD1_3259 70beeebd6060be46941969c597714adb 822 PIRSF PIRSF000437 19 817 0.0 T 15-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 XDD1_3259 70beeebd6060be46941969c597714adb 822 SMART SM00563 302 429 8.3E-29 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XDD1_3259 70beeebd6060be46941969c597714adb 822 SUPERFAMILY SSF69593 274 489 5.89E-24 T 15-10-2018 XDD1_0082 498a2b2f49ce66b64d64d2d607a8837d 391 SUPERFAMILY SSF103473 4 385 1.11E-54 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0082 498a2b2f49ce66b64d64d2d607a8837d 391 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 381 1.1E-61 T 15-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 XDD1_0082 498a2b2f49ce66b64d64d2d607a8837d 391 Gene3D G3DSA:1.20.1720.10 7 384 5.2E-77 T 15-10-2018 XDD1_0082 498a2b2f49ce66b64d64d2d607a8837d 391 Pfam PF07690 Major Facilitator Superfamily 13 351 2.0E-43 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_3618 98b05606a01d95f2b52fb343702dbe89 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 3.9E-20 T 15-10-2018 IPR010035 ThiS, thiamine-biosynthesis XDD1_3618 98b05606a01d95f2b52fb343702dbe89 66 SUPERFAMILY SSF54285 1 66 2.18E-17 T 15-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp XDD1_3618 98b05606a01d95f2b52fb343702dbe89 66 Gene3D G3DSA:3.10.20.30 1 66 3.4E-22 T 15-10-2018 IPR012675 Beta-grasp domain superfamily XDD1_3618 98b05606a01d95f2b52fb343702dbe89 66 Pfam PF02597 ThiS family 5 66 9.4E-13 T 15-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 XDD1_1801 760748ddc494c8d9298dfa776ae8fe67 858 Pfam PF00501 AMP-binding enzyme 245 643 1.3E-76 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_1801 760748ddc494c8d9298dfa776ae8fe67 858 SUPERFAMILY SSF56801 238 776 1.1E-110 T 15-10-2018 XDD1_1801 760748ddc494c8d9298dfa776ae8fe67 858 SUPERFAMILY SSF47336 760 831 8.77E-15 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1801 760748ddc494c8d9298dfa776ae8fe67 858 Gene3D G3DSA:3.30.300.30 639 751 4.6E-22 T 15-10-2018 XDD1_1801 760748ddc494c8d9298dfa776ae8fe67 858 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 267 656 3.0E-97 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_1801 760748ddc494c8d9298dfa776ae8fe67 858 Gene3D G3DSA:3.40.50.12780 231 638 1.7E-98 T 15-10-2018 XDD1_1801 760748ddc494c8d9298dfa776ae8fe67 858 ProSitePatterns PS00455 Putative AMP-binding domain signature. 383 394 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_1801 760748ddc494c8d9298dfa776ae8fe67 858 Pfam PF00550 Phosphopantetheine attachment site 766 830 1.3E-13 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_1801 760748ddc494c8d9298dfa776ae8fe67 858 Gene3D G3DSA:1.10.1200.10 752 836 3.4E-15 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2914 b4434d2baae3e60923da79c2f1ed8d4a 302 PIRSF PIRSF020481 1 302 1.3E-123 T 15-10-2018 IPR014507 Baseplate assembly protein J, predicted XDD1_2914 b4434d2baae3e60923da79c2f1ed8d4a 302 Pfam PF04865 Baseplate J-like protein 118 261 2.6E-24 T 15-10-2018 IPR006949 Baseplate protein J-like XDD1_1605 d505fca56e81a32e85ac3aea7442d934 602 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 443 544 2.3E-9 T 15-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 XDD1_1605 d505fca56e81a32e85ac3aea7442d934 602 Pfam PF13654 AAA domain 131 331 1.6E-25 T 15-10-2018 XDD1_1605 d505fca56e81a32e85ac3aea7442d934 602 Gene3D G3DSA:3.40.50.300 130 237 1.5E-12 T 15-10-2018 XDD1_1605 d505fca56e81a32e85ac3aea7442d934 602 Gene3D G3DSA:3.30.230.10 334 573 1.6E-93 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XDD1_1605 d505fca56e81a32e85ac3aea7442d934 602 SUPERFAMILY SSF54211 357 548 9.48E-36 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_1605 d505fca56e81a32e85ac3aea7442d934 602 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 470 489 1.7E-9 T 15-10-2018 XDD1_1605 d505fca56e81a32e85ac3aea7442d934 602 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 357 373 1.7E-9 T 15-10-2018 XDD1_1605 d505fca56e81a32e85ac3aea7442d934 602 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 500 518 1.7E-9 T 15-10-2018 XDD1_1605 d505fca56e81a32e85ac3aea7442d934 602 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 440 459 1.7E-9 T 15-10-2018 XDD1_3902 2198f88a5e3a74f0db7327eaa7ec9d27 223 SUPERFAMILY SSF53474 7 202 7.35E-21 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_3902 2198f88a5e3a74f0db7327eaa7ec9d27 223 Gene3D G3DSA:3.40.50.1820 2 196 7.2E-26 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_3902 2198f88a5e3a74f0db7327eaa7ec9d27 223 Pfam PF01764 Lipase (class 3) 15 158 3.8E-17 T 15-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 XDD1_0272 c715bc51c9178a19c64d260e7a83518d 346 Gene3D G3DSA:3.90.78.10 223 346 6.0E-46 T 15-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XDD1_0272 c715bc51c9178a19c64d260e7a83518d 346 Gene3D G3DSA:3.30.43.10 8 71 7.7E-20 T 15-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 XDD1_0272 c715bc51c9178a19c64d260e7a83518d 346 SUPERFAMILY SSF56176 9 199 6.54E-45 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XDD1_0272 c715bc51c9178a19c64d260e7a83518d 346 SUPERFAMILY SSF56194 206 344 2.62E-51 T 15-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XDD1_0272 c715bc51c9178a19c64d260e7a83518d 346 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 346 86.723 T 15-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XDD1_0272 c715bc51c9178a19c64d260e7a83518d 346 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 209 333 2.6E-35 T 15-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XDD1_0272 c715bc51c9178a19c64d260e7a83518d 346 Gene3D G3DSA:3.30.465.10 73 222 4.4E-58 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 XDD1_0272 c715bc51c9178a19c64d260e7a83518d 346 Pfam PF01565 FAD binding domain 26 149 3.1E-20 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 XDD1_0272 c715bc51c9178a19c64d260e7a83518d 346 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 334 1.5E-107 T 15-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XDD1_1723 a04d6cf88fcba0fcc6b98afbf000aaad 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 198 5.7E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_1723 a04d6cf88fcba0fcc6b98afbf000aaad 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 5.7E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_1723 a04d6cf88fcba0fcc6b98afbf000aaad 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 5.7E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_1723 a04d6cf88fcba0fcc6b98afbf000aaad 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 5.7E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_1723 a04d6cf88fcba0fcc6b98afbf000aaad 204 Gene3D G3DSA:3.40.50.12740 4 204 8.3E-50 T 15-10-2018 XDD1_1723 a04d6cf88fcba0fcc6b98afbf000aaad 204 SMART SM00448 4 114 1.4E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_1723 a04d6cf88fcba0fcc6b98afbf000aaad 204 SUPERFAMILY SSF46894 128 201 3.3E-18 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XDD1_1723 a04d6cf88fcba0fcc6b98afbf000aaad 204 Pfam PF00072 Response regulator receiver domain 6 115 5.2E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_1723 a04d6cf88fcba0fcc6b98afbf000aaad 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_1723 a04d6cf88fcba0fcc6b98afbf000aaad 204 SMART SM00421 142 199 4.9E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_1723 a04d6cf88fcba0fcc6b98afbf000aaad 204 SUPERFAMILY SSF52172 2 126 3.27E-24 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_2884 889b53fbe9ca3e372e92fd14781078bf 483 SUPERFAMILY SSF103378 12 482 7.85E-160 T 15-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 XDD1_2884 889b53fbe9ca3e372e92fd14781078bf 483 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 13 483 1.9E-261 T 15-10-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 XDD1_2884 889b53fbe9ca3e372e92fd14781078bf 483 Gene3D G3DSA:3.30.1330.120 285 426 1.0E-208 T 15-10-2018 XDD1_2884 889b53fbe9ca3e372e92fd14781078bf 483 Pfam PF03972 MmgE/PrpD family 18 464 5.0E-162 T 15-10-2018 IPR005656 MmgE/PrpD GO:0016829 XDD1_2884 889b53fbe9ca3e372e92fd14781078bf 483 Gene3D G3DSA:1.10.4100.10 22 461 1.0E-208 T 15-10-2018 XDD1_2869 500063b68cc657b6464a7c35694975dc 210 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 15 77 2.6E-26 T 15-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 XDD1_2869 500063b68cc657b6464a7c35694975dc 210 Gene3D G3DSA:1.10.260.40 10 79 3.1E-23 T 15-10-2018 XDD1_2869 500063b68cc657b6464a7c35694975dc 210 Gene3D G3DSA:2.10.109.10 96 210 4.4E-29 T 15-10-2018 XDD1_2869 500063b68cc657b6464a7c35694975dc 210 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 105 204 9.7E-29 T 15-10-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 XDD1_1512 fadfa781fe1b5b729068285f78079f4e 288 Pfam PF13384 Homeodomain-like domain 26 73 3.0E-10 T 15-10-2018 XDD1_1512 fadfa781fe1b5b729068285f78079f4e 288 Pfam PF13358 DDE superfamily endonuclease 177 287 6.5E-13 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_1512 fadfa781fe1b5b729068285f78079f4e 288 SUPERFAMILY SSF46689 14 140 1.11E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1512 fadfa781fe1b5b729068285f78079f4e 288 Pfam PF13592 Winged helix-turn helix 108 156 8.3E-7 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_3091 0b7b2c5453044b0e81347cdd2d50aa91 401 Pfam PF03406 Phage tail fibre repeat 49 87 2.3E-15 T 15-10-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 XDD1_2594 d3c1ea54b4fced1afc94221356687b97 224 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 46 182 8.8E-69 T 15-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2594 d3c1ea54b4fced1afc94221356687b97 224 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 181 41.746 T 15-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2594 d3c1ea54b4fced1afc94221356687b97 224 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 68 174 1.3E-21 T 15-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2594 d3c1ea54b4fced1afc94221356687b97 224 SUPERFAMILY SSF56770 43 189 7.59E-64 T 15-10-2018 XDD1_2594 d3c1ea54b4fced1afc94221356687b97 224 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 148 164 - T 15-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2594 d3c1ea54b4fced1afc94221356687b97 224 Gene3D G3DSA:3.40.50.12280 24 192 8.4E-70 T 15-10-2018 XDD1_0077 3e18b61bb3d713c9cffc788a21dd4f09 183 SUPERFAMILY SSF55811 6 180 1.27E-34 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XDD1_0077 3e18b61bb3d713c9cffc788a21dd4f09 183 Gene3D G3DSA:3.90.79.10 7 183 6.0E-42 T 15-10-2018 XDD1_0077 3e18b61bb3d713c9cffc788a21dd4f09 183 ProSitePatterns PS00893 Nudix box signature. 79 100 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XDD1_0077 3e18b61bb3d713c9cffc788a21dd4f09 183 Pfam PF00293 NUDIX domain 46 124 4.7E-11 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XDD1_0201 79dbc8c4f4e3da4410feb884e7edb458 105 SUPERFAMILY SSF47598 2 105 1.49E-57 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XDD1_0201 79dbc8c4f4e3da4410feb884e7edb458 105 Hamap MF_00744 Met repressor [metJ]. 1 105 39.987 T 15-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 XDD1_0201 79dbc8c4f4e3da4410feb884e7edb458 105 Gene3D G3DSA:1.10.140.10 2 105 2.0E-62 T 15-10-2018 IPR023453 Methionine repressor MetJ domain superfamily XDD1_0201 79dbc8c4f4e3da4410feb884e7edb458 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 2.0E-47 T 15-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 XDD1_0201 79dbc8c4f4e3da4410feb884e7edb458 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 8.3E-58 T 15-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 XDD1_1730 58b498647571136545265c4996050668 266 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 266 1.8E-122 T 15-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 XDD1_1730 58b498647571136545265c4996050668 266 Pfam PF03609 PTS system sorbose-specific iic component 5 237 4.5E-76 T 15-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 XDD1_1005 b9f362ec2f2e7951099baada2bb74899 312 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 300 1.4E-25 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 XDD1_1005 b9f362ec2f2e7951099baada2bb74899 312 SUPERFAMILY SSF51735 102 286 3.59E-44 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1005 b9f362ec2f2e7951099baada2bb74899 312 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 285 2.0E-45 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 XDD1_1005 b9f362ec2f2e7951099baada2bb74899 312 Gene3D G3DSA:3.40.50.720 7 296 1.4E-87 T 15-10-2018 XDD1_1005 b9f362ec2f2e7951099baada2bb74899 312 Gene3D G3DSA:3.40.50.720 95 287 1.4E-87 T 15-10-2018 XDD1_1005 b9f362ec2f2e7951099baada2bb74899 312 SUPERFAMILY SSF52283 4 137 6.43E-30 T 15-10-2018 XDD1_1435 bd24e652bbdd742ca68394cc4460b503 250 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 9 248 6.7E-125 T 15-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 XDD1_1435 bd24e652bbdd742ca68394cc4460b503 250 Pfam PF00899 ThiF family 13 246 3.5E-63 T 15-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 XDD1_1435 bd24e652bbdd742ca68394cc4460b503 250 Gene3D G3DSA:3.40.50.720 5 250 6.5E-89 T 15-10-2018 XDD1_1435 bd24e652bbdd742ca68394cc4460b503 250 SUPERFAMILY SSF69572 4 248 6.41E-86 T 15-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 XDD1_0274 803d31896646443f7393c4c4c38ecb3f 316 SUPERFAMILY SSF52540 10 315 2.19E-78 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0274 803d31896646443f7393c4c4c38ecb3f 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 3.2E-163 T 15-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 XDD1_0274 803d31896646443f7393c4c4c38ecb3f 316 PIRSF PIRSF000545 1 316 1.4E-147 T 15-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 XDD1_0274 803d31896646443f7393c4c4c38ecb3f 316 Gene3D G3DSA:3.40.50.300 9 316 5.7E-94 T 15-10-2018 XDD1_0274 803d31896646443f7393c4c4c38ecb3f 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 243 1.5E-15 T 15-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 XDD1_0274 803d31896646443f7393c4c4c38ecb3f 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 186.355 T 15-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 XDD1_0785 13f33e3b12134e882fbb1ea9ef1ff913 215 Gene3D G3DSA:3.40.50.1240 1 210 6.9E-57 T 15-10-2018 IPR029033 Histidine phosphatase superfamily XDD1_0785 13f33e3b12134e882fbb1ea9ef1ff913 215 PIRSF PIRSF000709 2 135 2.9E-12 T 15-10-2018 XDD1_0785 13f33e3b12134e882fbb1ea9ef1ff913 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 15-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 XDD1_0785 13f33e3b12134e882fbb1ea9ef1ff913 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 3.8E-57 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XDD1_0785 13f33e3b12134e882fbb1ea9ef1ff913 215 SUPERFAMILY SSF53254 1 208 9.95E-57 T 15-10-2018 IPR029033 Histidine phosphatase superfamily XDD1_0785 13f33e3b12134e882fbb1ea9ef1ff913 215 SMART SM00855 3 157 1.3E-24 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XDD1_0785 13f33e3b12134e882fbb1ea9ef1ff913 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 49.7 T 15-10-2018 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 XDD1_2485 5672546e12ce6f3da4f0caceed608b52 415 Pfam PF02687 FtsX-like permease family 302 408 2.1E-13 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 XDD1_2485 5672546e12ce6f3da4f0caceed608b52 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 414 3.3E-155 T 15-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 XDD1_2485 5672546e12ce6f3da4f0caceed608b52 415 Pfam PF12704 MacB-like periplasmic core domain 28 232 1.3E-14 T 15-10-2018 IPR025857 MacB-like periplasmic core domain XDD1_2485 5672546e12ce6f3da4f0caceed608b52 415 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 6 415 1.5E-201 T 15-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 XDD1_2651 49ed5c91d4ac3c8375d9aac212e023d5 279 Pfam PF01416 tRNA pseudouridine synthase 157 259 6.1E-29 T 15-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_2651 49ed5c91d4ac3c8375d9aac212e023d5 279 Pfam PF01416 tRNA pseudouridine synthase 23 117 8.7E-10 T 15-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_2651 49ed5c91d4ac3c8375d9aac212e023d5 279 Gene3D G3DSA:3.30.70.580 13 119 3.8E-42 T 15-10-2018 XDD1_2651 49ed5c91d4ac3c8375d9aac212e023d5 279 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 16 258 35.52 T 15-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_2651 49ed5c91d4ac3c8375d9aac212e023d5 279 PIRSF PIRSF001430 15 266 1.3E-79 T 15-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_2651 49ed5c91d4ac3c8375d9aac212e023d5 279 SUPERFAMILY SSF55120 16 270 1.73E-93 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_2651 49ed5c91d4ac3c8375d9aac212e023d5 279 Gene3D G3DSA:3.30.70.660 120 257 4.7E-50 T 15-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 XDD1_2651 49ed5c91d4ac3c8375d9aac212e023d5 279 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 17 253 3.8E-78 T 15-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_1525 c4b4abd106a679a50c830bcc41a08bb7 360 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 172 360 37.728 T 15-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 XDD1_1525 c4b4abd106a679a50c830bcc41a08bb7 360 SUPERFAMILY SSF56784 1 155 1.58E-38 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_1525 c4b4abd106a679a50c830bcc41a08bb7 360 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 201 342 1.6E-65 T 15-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 XDD1_1525 c4b4abd106a679a50c830bcc41a08bb7 360 SUPERFAMILY SSF54211 172 256 8.35E-33 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_1525 c4b4abd106a679a50c830bcc41a08bb7 360 Gene3D G3DSA:3.30.230.40 260 360 2.9E-36 T 15-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 XDD1_1525 c4b4abd106a679a50c830bcc41a08bb7 360 Gene3D G3DSA:3.30.230.40 163 259 1.7E-39 T 15-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 XDD1_1525 c4b4abd106a679a50c830bcc41a08bb7 360 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 231 244 - T 15-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 XDD1_1525 c4b4abd106a679a50c830bcc41a08bb7 360 Pfam PF13242 HAD-hyrolase-like 103 146 3.8E-5 T 15-10-2018 XDD1_1525 c4b4abd106a679a50c830bcc41a08bb7 360 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 149 4.6E-27 T 15-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 XDD1_1525 c4b4abd106a679a50c830bcc41a08bb7 360 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 163 8.7E-78 T 15-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 XDD1_1525 c4b4abd106a679a50c830bcc41a08bb7 360 SUPERFAMILY SSF54211 257 347 1.14E-31 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_1525 c4b4abd106a679a50c830bcc41a08bb7 360 Gene3D G3DSA:3.40.50.1000 1 162 1.9E-46 T 15-10-2018 IPR023214 HAD superfamily XDD1_1525 c4b4abd106a679a50c830bcc41a08bb7 360 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 324 336 - T 15-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 XDD1_1525 c4b4abd106a679a50c830bcc41a08bb7 360 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 360 51.707 T 15-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 XDD1_1525 c4b4abd106a679a50c830bcc41a08bb7 360 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 145 1.5E-46 T 15-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 XDD1_1922 92618b2a104122a8c5631a0caa46b195 251 SMART SM00345 20 81 9.0E-12 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_1922 92618b2a104122a8c5631a0caa46b195 251 Gene3D G3DSA:1.20.120.530 100 236 3.9E-9 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal XDD1_1922 92618b2a104122a8c5631a0caa46b195 251 SUPERFAMILY SSF48008 102 233 9.94E-8 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal XDD1_1922 92618b2a104122a8c5631a0caa46b195 251 Pfam PF07729 FCD domain 107 224 8.3E-6 T 15-10-2018 IPR011711 GntR, C-terminal XDD1_1922 92618b2a104122a8c5631a0caa46b195 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 75 7.2E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 XDD1_1922 92618b2a104122a8c5631a0caa46b195 251 SUPERFAMILY SSF46785 11 85 7.14E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1922 92618b2a104122a8c5631a0caa46b195 251 Gene3D G3DSA:1.10.10.10 12 82 1.8E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1922 92618b2a104122a8c5631a0caa46b195 251 SMART SM00895 105 226 0.0036 T 15-10-2018 IPR011711 GntR, C-terminal XDD1_0419 5ff0bac14e78a62c5ec0d83094f70852 313 SUPERFAMILY SSF52540 13 234 3.22E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0419 5ff0bac14e78a62c5ec0d83094f70852 313 SUPERFAMILY SSF52540 13 164 1.78E-18 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0419 5ff0bac14e78a62c5ec0d83094f70852 313 Pfam PF01715 IPP transferase 46 291 3.1E-87 T 15-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 XDD1_0419 5ff0bac14e78a62c5ec0d83094f70852 313 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 300 3.7E-119 T 15-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 XDD1_0419 5ff0bac14e78a62c5ec0d83094f70852 313 Gene3D G3DSA:1.10.20.140 119 190 1.0E-107 T 15-10-2018 XDD1_0419 5ff0bac14e78a62c5ec0d83094f70852 313 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 309 30.239 T 15-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 XDD1_0419 5ff0bac14e78a62c5ec0d83094f70852 313 Gene3D G3DSA:3.40.50.300 16 296 1.0E-107 T 15-10-2018 XDD1_0811 400a9063ca2e3143d5b20d7e80e8f92f 382 Gene3D G3DSA:2.40.160.10 23 382 5.0E-136 T 15-10-2018 IPR023614 Porin domain superfamily XDD1_0811 400a9063ca2e3143d5b20d7e80e8f92f 382 Pfam PF00267 Gram-negative porin 28 382 2.4E-131 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 XDD1_0811 400a9063ca2e3143d5b20d7e80e8f92f 382 SUPERFAMILY SSF56935 23 382 2.88E-77 T 15-10-2018 XDD1_0811 400a9063ca2e3143d5b20d7e80e8f92f 382 PRINTS PR00183 E.coli/Salmonella-type porin signature 280 299 4.8E-64 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 XDD1_0811 400a9063ca2e3143d5b20d7e80e8f92f 382 PRINTS PR00183 E.coli/Salmonella-type porin signature 52 70 4.8E-64 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 XDD1_0811 400a9063ca2e3143d5b20d7e80e8f92f 382 PRINTS PR00183 E.coli/Salmonella-type porin signature 246 263 4.8E-64 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 XDD1_0811 400a9063ca2e3143d5b20d7e80e8f92f 382 PRINTS PR00183 E.coli/Salmonella-type porin signature 152 174 4.8E-64 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 XDD1_0811 400a9063ca2e3143d5b20d7e80e8f92f 382 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 4.8E-64 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 XDD1_0811 400a9063ca2e3143d5b20d7e80e8f92f 382 PRINTS PR00183 E.coli/Salmonella-type porin signature 97 119 4.8E-64 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 XDD1_0811 400a9063ca2e3143d5b20d7e80e8f92f 382 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 53 64 5.9E-14 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 XDD1_0811 400a9063ca2e3143d5b20d7e80e8f92f 382 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 154 165 5.9E-14 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 XDD1_0811 400a9063ca2e3143d5b20d7e80e8f92f 382 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 240 252 5.9E-14 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 XDD1_0811 400a9063ca2e3143d5b20d7e80e8f92f 382 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 97 107 5.9E-14 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 XDD1_0811 400a9063ca2e3143d5b20d7e80e8f92f 382 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 334 351 5.9E-14 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 XDD1_0610 5f52dad5b60a9fcae2240491dba4b98d 96 SUPERFAMILY SSF47413 37 85 2.56E-10 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_0610 5f52dad5b60a9fcae2240491dba4b98d 96 Pfam PF13560 Helix-turn-helix domain 34 88 5.7E-8 T 15-10-2018 XDD1_0610 5f52dad5b60a9fcae2240491dba4b98d 96 SMART SM00530 36 90 1.6E-5 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_0610 5f52dad5b60a9fcae2240491dba4b98d 96 Gene3D G3DSA:1.10.260.40 36 96 1.2E-19 T 15-10-2018 XDD1_0563 304880711125d7e60d72947e4d970161 414 SUPERFAMILY SSF51905 2 393 1.35E-19 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0563 304880711125d7e60d72947e4d970161 414 Gene3D G3DSA:3.30.9.40 65 272 9.5E-123 T 15-10-2018 XDD1_0563 304880711125d7e60d72947e4d970161 414 Gene3D G3DSA:3.50.50.60 4 323 9.5E-123 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0563 304880711125d7e60d72947e4d970161 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 3.4E-5 T 15-10-2018 XDD1_0563 304880711125d7e60d72947e4d970161 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 3.4E-5 T 15-10-2018 XDD1_0563 304880711125d7e60d72947e4d970161 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 3.4E-5 T 15-10-2018 XDD1_0103 8233f02aec14b907407b8fdeeaeb9912 444 SUPERFAMILY SSF51695 134 438 3.03E-27 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 XDD1_0103 8233f02aec14b907407b8fdeeaeb9912 444 Gene3D G3DSA:3.20.20.190 133 440 4.6E-19 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 XDD1_2826 94b6317f13f3e2c601f6ea6af891b7f5 97 SUPERFAMILY SSF54285 4 78 1.83E-26 T 15-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp XDD1_2826 94b6317f13f3e2c601f6ea6af891b7f5 97 Hamap MF_00460 Protein RnfH [rnfH]. 4 94 25.828 T 15-10-2018 IPR005346 RnfH protein XDD1_2826 94b6317f13f3e2c601f6ea6af891b7f5 97 Gene3D G3DSA:3.10.20.280 1 88 4.6E-35 T 15-10-2018 IPR037021 RnfH superfamily XDD1_2826 94b6317f13f3e2c601f6ea6af891b7f5 97 Pfam PF03658 RnfH family Ubiquitin 4 86 2.6E-35 T 15-10-2018 IPR005346 RnfH protein XDD1_0230 18e99716a6a65c225d762942318dd11f 105 Pfam PF13612 Transposase DDE domain 65 105 6.3E-16 T 15-10-2018 IPR025668 Transposase DDE domain XDD1_0248 18e99716a6a65c225d762942318dd11f 105 Pfam PF13612 Transposase DDE domain 65 105 6.3E-16 T 15-10-2018 IPR025668 Transposase DDE domain XDD1_2898 56b823c287f15023f48ef22d97e399dd 158 PIRSF PIRSF006865 1 158 4.1E-60 T 15-10-2018 IPR005658 Proteinase inhibitor I11, ecotin XDD1_2898 56b823c287f15023f48ef22d97e399dd 158 Pfam PF03974 Ecotin 26 148 2.1E-51 T 15-10-2018 IPR005658 Proteinase inhibitor I11, ecotin XDD1_2898 56b823c287f15023f48ef22d97e399dd 158 SUPERFAMILY SSF49772 23 156 1.44E-54 T 15-10-2018 IPR036198 Ecotin superfamily XDD1_2898 56b823c287f15023f48ef22d97e399dd 158 Gene3D G3DSA:4.10.1230.10 101 158 1.9E-24 T 15-10-2018 IPR027438 Ecotin, C-terminal XDD1_2898 56b823c287f15023f48ef22d97e399dd 158 Gene3D G3DSA:2.60.40.550 18 100 3.5E-33 T 15-10-2018 XDD1_0071 c0d6d6102ed85d555199de162513aeb9 173 Pfam PF01202 Shikimate kinase 13 170 3.2E-56 T 15-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 XDD1_0071 c0d6d6102ed85d555199de162513aeb9 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 15-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 XDD1_0071 c0d6d6102ed85d555199de162513aeb9 173 SUPERFAMILY SSF52540 4 170 9.83E-35 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0071 c0d6d6102ed85d555199de162513aeb9 173 PRINTS PR01100 Shikimate kinase family signature 31 44 5.2E-29 T 15-10-2018 XDD1_0071 c0d6d6102ed85d555199de162513aeb9 173 PRINTS PR01100 Shikimate kinase family signature 59 67 5.2E-29 T 15-10-2018 XDD1_0071 c0d6d6102ed85d555199de162513aeb9 173 PRINTS PR01100 Shikimate kinase family signature 98 115 5.2E-29 T 15-10-2018 XDD1_0071 c0d6d6102ed85d555199de162513aeb9 173 PRINTS PR01100 Shikimate kinase family signature 7 22 5.2E-29 T 15-10-2018 XDD1_0071 c0d6d6102ed85d555199de162513aeb9 173 PRINTS PR01100 Shikimate kinase family signature 77 86 5.2E-29 T 15-10-2018 XDD1_0071 c0d6d6102ed85d555199de162513aeb9 173 Gene3D G3DSA:3.40.50.300 1 173 1.9E-57 T 15-10-2018 XDD1_0071 c0d6d6102ed85d555199de162513aeb9 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.302 T 15-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 XDD1_3293 351b5dd6966097bb59180a51e5b140a1 394 SUPERFAMILY SSF53756 20 360 4.71E-26 T 15-10-2018 XDD1_3293 351b5dd6966097bb59180a51e5b140a1 394 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 14 391 9.9E-173 T 15-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XDD1_3293 351b5dd6966097bb59180a51e5b140a1 394 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 17 393 42.858 T 15-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XDD1_3293 351b5dd6966097bb59180a51e5b140a1 394 Pfam PF02684 Lipid-A-disaccharide synthetase 20 388 2.0E-145 T 15-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XDD1_p0011 fa6da45bb503eb6073552ac834b7d79d 121 Gene3D G3DSA:2.30.110.20 3 120 3.3E-13 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_p0011 fa6da45bb503eb6073552ac834b7d79d 121 SUPERFAMILY SSF141452 4 118 3.53E-10 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_p0011 fa6da45bb503eb6073552ac834b7d79d 121 Pfam PF05638 Type VI secretion system effector, Hcp 27 118 4.5E-7 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_2007 05a6374b3db00e49742cd1d587333c95 284 Gene3D G3DSA:3.20.20.70 1 284 4.6E-101 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_2007 05a6374b3db00e49742cd1d587333c95 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.861 T 15-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XDD1_2007 05a6374b3db00e49742cd1d587333c95 284 SUPERFAMILY SSF51569 3 277 6.41E-105 T 15-10-2018 XDD1_2007 05a6374b3db00e49742cd1d587333c95 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 1.0E-119 T 15-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XDD1_2007 05a6374b3db00e49742cd1d587333c95 284 Pfam PF00793 DAHP synthetase I family 9 274 3.6E-69 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XDD1_0404 8ffd42f63a9f0db54e89ed916b157295 349 Pfam PF13592 Winged helix-turn helix 100 155 3.4E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_0404 8ffd42f63a9f0db54e89ed916b157295 349 Pfam PF13551 Winged helix-turn helix 32 88 1.8E-8 T 15-10-2018 XDD1_0404 8ffd42f63a9f0db54e89ed916b157295 349 Pfam PF13358 DDE superfamily endonuclease 169 313 1.6E-35 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0404 8ffd42f63a9f0db54e89ed916b157295 349 SUPERFAMILY SSF46689 17 131 3.05E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0404 8ffd42f63a9f0db54e89ed916b157295 349 Gene3D G3DSA:3.30.420.470 133 342 2.3E-11 T 15-10-2018 XDD1_0404 8ffd42f63a9f0db54e89ed916b157295 349 SUPERFAMILY SSF53098 222 322 3.95E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3367 9738844a7f01f601ac5342134789759a 169 SUPERFAMILY SSF54523 13 158 5.34E-11 T 15-10-2018 XDD1_3367 9738844a7f01f601ac5342134789759a 169 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 30 4.2E-8 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site XDD1_3367 9738844a7f01f601ac5342134789759a 169 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 3.1E-8 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site XDD1_3858 0cb705d91c1c427eba216a2454e5ed4d 404 Pfam PF07690 Major Facilitator Superfamily 14 316 1.4E-12 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_3858 0cb705d91c1c427eba216a2454e5ed4d 404 Gene3D G3DSA:1.20.1250.20 8 386 1.7E-19 T 15-10-2018 XDD1_3858 0cb705d91c1c427eba216a2454e5ed4d 404 SUPERFAMILY SSF103473 10 389 3.14E-26 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1552 6f4aab8093478e8bb6281187da4d85e0 229 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 35 201 6.6E-68 T 15-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 XDD1_1552 6f4aab8093478e8bb6281187da4d85e0 229 Gene3D G3DSA:3.40.630.70 61 228 2.3E-66 T 15-10-2018 XDD1_1552 6f4aab8093478e8bb6281187da4d85e0 229 Gene3D G3DSA:2.30.210.20 3 60 3.7E-24 T 15-10-2018 XDD1_1552 6f4aab8093478e8bb6281187da4d85e0 229 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 38 213 1.5E-70 T 15-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 XDD1_1552 6f4aab8093478e8bb6281187da4d85e0 229 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 229 87.549 T 15-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 XDD1_1552 6f4aab8093478e8bb6281187da4d85e0 229 SUPERFAMILY SSF55729 3 226 1.8E-88 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_0552 ec4e5b934b7e88f2fbe557e4a9cbad51 265 Pfam PF11195 Protein of unknown function (DUF2829) 40 102 6.5E-8 T 15-10-2018 IPR021361 Protein of unknown function DUF2829 XDD1_0815 c735c8a75e5f80fc060fd7ff2ad250c5 544 PIRSF PIRSF002741 7 544 7.6E-116 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 XDD1_0815 c735c8a75e5f80fc060fd7ff2ad250c5 544 SUPERFAMILY SSF53850 40 540 9.5E-148 T 15-10-2018 XDD1_0815 c735c8a75e5f80fc060fd7ff2ad250c5 544 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 94 115 - T 15-10-2018 IPR023765 Solute-binding protein family 5, conserved site XDD1_0815 c735c8a75e5f80fc060fd7ff2ad250c5 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 89 469 3.0E-94 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain XDD1_0815 c735c8a75e5f80fc060fd7ff2ad250c5 544 Gene3D G3DSA:3.10.105.10 303 514 5.3E-180 T 15-10-2018 XDD1_0815 c735c8a75e5f80fc060fd7ff2ad250c5 544 Gene3D G3DSA:3.90.76.10 78 201 5.3E-180 T 15-10-2018 XDD1_0815 c735c8a75e5f80fc060fd7ff2ad250c5 544 Gene3D G3DSA:3.40.190.10 49 526 5.3E-180 T 15-10-2018 XDD1_2823 c33428b3d27a04f1e73a84f9cea17a0a 299 SUPERFAMILY SSF111331 14 296 7.19E-94 T 15-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily XDD1_2823 c33428b3d27a04f1e73a84f9cea17a0a 299 Gene3D G3DSA:3.40.50.10330 30 294 7.1E-98 T 15-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 XDD1_2823 c33428b3d27a04f1e73a84f9cea17a0a 299 Gene3D G3DSA:2.60.200.30 135 271 7.1E-98 T 15-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 XDD1_2823 c33428b3d27a04f1e73a84f9cea17a0a 299 Pfam PF01513 ATP-NAD kinase 15 278 5.3E-74 T 15-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 XDD1_2823 c33428b3d27a04f1e73a84f9cea17a0a 299 Hamap MF_00361 NAD kinase [nadK]. 13 294 33.845 T 15-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 XDD1_1093 390b29097441e20224453190e55adf90 218 Pfam PF11444 Protein of unknown function (DUF2895) 6 203 7.1E-90 T 15-10-2018 IPR021548 Protein of unknown function DUF2895 XDD1_1093 390b29097441e20224453190e55adf90 218 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 204 1.3E-94 T 15-10-2018 IPR021548 Protein of unknown function DUF2895 XDD1_1310 c65da571b224d91ccae6aac8e455156a 705 SMART SM00382 480 665 4.8E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1310 c65da571b224d91ccae6aac8e455156a 705 Pfam PF00664 ABC transporter transmembrane region 144 411 3.9E-45 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XDD1_1310 c65da571b224d91ccae6aac8e455156a 705 Pfam PF03412 Peptidase C39 family 32 122 1.4E-6 T 15-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 XDD1_1310 c65da571b224d91ccae6aac8e455156a 705 Gene3D G3DSA:1.20.1560.10 130 442 1.3E-69 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_1310 c65da571b224d91ccae6aac8e455156a 705 Pfam PF00005 ABC transporter 472 620 8.9E-36 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1310 c65da571b224d91ccae6aac8e455156a 705 Gene3D G3DSA:3.40.50.300 446 705 1.3E-90 T 15-10-2018 XDD1_1310 c65da571b224d91ccae6aac8e455156a 705 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 31 691 4.6E-236 T 15-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 XDD1_1310 c65da571b224d91ccae6aac8e455156a 705 Gene3D G3DSA:3.90.70.10 15 126 1.7E-11 T 15-10-2018 XDD1_1310 c65da571b224d91ccae6aac8e455156a 705 ProSitePatterns PS00211 ABC transporters family signature. 592 606 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_1310 c65da571b224d91ccae6aac8e455156a 705 SUPERFAMILY SSF90123 129 440 1.7E-62 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XDD1_1310 c65da571b224d91ccae6aac8e455156a 705 SUPERFAMILY SSF52540 446 690 4.71E-88 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1726 38fe4d57d8752aec74d50c8b79133338 269 Pfam PF13847 Methyltransferase domain 85 199 4.9E-11 T 15-10-2018 IPR025714 Methyltransferase domain XDD1_1726 38fe4d57d8752aec74d50c8b79133338 269 SUPERFAMILY SSF53335 4 249 3.01E-43 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_1726 38fe4d57d8752aec74d50c8b79133338 269 Gene3D G3DSA:3.40.50.150 1 269 6.5E-81 T 15-10-2018 XDD1_1726 38fe4d57d8752aec74d50c8b79133338 269 PIRSF PIRSF018249 1 269 6.5E-85 T 15-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 XDD1_0386 2b52548fecbfc49d8dc69069b8c477a3 333 Pfam PF13377 Periplasmic binding protein-like domain 172 327 2.7E-28 T 15-10-2018 XDD1_0386 2b52548fecbfc49d8dc69069b8c477a3 333 Gene3D G3DSA:1.10.260.40 4 64 1.4E-20 T 15-10-2018 XDD1_0386 2b52548fecbfc49d8dc69069b8c477a3 333 Gene3D G3DSA:3.40.50.2300 68 306 4.9E-67 T 15-10-2018 XDD1_0386 2b52548fecbfc49d8dc69069b8c477a3 333 Gene3D G3DSA:3.40.50.2300 164 292 4.9E-67 T 15-10-2018 XDD1_0386 2b52548fecbfc49d8dc69069b8c477a3 333 SUPERFAMILY SSF47413 3 64 1.31E-14 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_0386 2b52548fecbfc49d8dc69069b8c477a3 333 SUPERFAMILY SSF53822 68 329 4.71E-64 T 15-10-2018 IPR028082 Periplasmic binding protein-like I XDD1_0386 2b52548fecbfc49d8dc69069b8c477a3 333 SMART SM00354 5 76 4.1E-21 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_0386 2b52548fecbfc49d8dc69069b8c477a3 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 53 4.4E-13 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_1508 d70b649cba248c013558cf5597e07896 245 SUPERFAMILY SSF53335 7 218 5.23E-44 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_1508 d70b649cba248c013558cf5597e07896 245 Pfam PF13649 Methyltransferase domain 43 138 2.2E-21 T 15-10-2018 XDD1_1508 d70b649cba248c013558cf5597e07896 245 Gene3D G3DSA:3.40.50.150 24 229 1.6E-41 T 15-10-2018 XDD1_0778 c173ad86764780ceb6fb04da39ac6dad 430 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 15-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 XDD1_0778 c173ad86764780ceb6fb04da39ac6dad 430 Pfam PF14821 Threonine synthase N terminus 8 80 8.4E-14 T 15-10-2018 IPR029144 Threonine synthase, N-terminal XDD1_0778 c173ad86764780ceb6fb04da39ac6dad 430 Gene3D G3DSA:3.40.50.1100 103 401 2.5E-138 T 15-10-2018 XDD1_0778 c173ad86764780ceb6fb04da39ac6dad 430 Gene3D G3DSA:3.90.1380.10 1 81 2.4E-34 T 15-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily XDD1_0778 c173ad86764780ceb6fb04da39ac6dad 430 SUPERFAMILY SSF53686 1 427 3.54E-133 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XDD1_0778 c173ad86764780ceb6fb04da39ac6dad 430 Gene3D G3DSA:3.40.50.1100 85 394 2.5E-138 T 15-10-2018 XDD1_0778 c173ad86764780ceb6fb04da39ac6dad 430 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 99 370 3.3E-22 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XDD1_0778 c173ad86764780ceb6fb04da39ac6dad 430 TIGRFAM TIGR00260 thrC: threonine synthase 52 397 4.2E-120 T 15-10-2018 IPR004450 Threonine synthase-like XDD1_0078 fe43fd340fd727cb1b11ac295c517bc8 700 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 25 690 0.0 T 15-10-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 XDD1_0078 fe43fd340fd727cb1b11ac295c517bc8 700 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 693 3.9E-283 T 15-10-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 XDD1_0990 0fb43ab860258a30e708a9c0ef69bb2d 358 Gene3D G3DSA:3.20.20.70 2 358 1.7E-152 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_0990 0fb43ab860258a30e708a9c0ef69bb2d 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 3.0E-90 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 XDD1_0990 0fb43ab860258a30e708a9c0ef69bb2d 358 PIRSF PIRSF001359 13 358 5.2E-101 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 XDD1_0990 0fb43ab860258a30e708a9c0ef69bb2d 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 5.6E-115 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 XDD1_0990 0fb43ab860258a30e708a9c0ef69bb2d 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 XDD1_0990 0fb43ab860258a30e708a9c0ef69bb2d 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 XDD1_0990 0fb43ab860258a30e708a9c0ef69bb2d 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 4.3E-188 T 15-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 XDD1_0990 0fb43ab860258a30e708a9c0ef69bb2d 358 SUPERFAMILY SSF51569 4 356 5.49E-133 T 15-10-2018 XDD1_0676 7f772738c23e8d37a7fe960bf0920861 266 Pfam PF07690 Major Facilitator Superfamily 24 246 2.3E-27 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0676 7f772738c23e8d37a7fe960bf0920861 266 SUPERFAMILY SSF103473 7 244 2.22E-37 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0676 7f772738c23e8d37a7fe960bf0920861 266 Gene3D G3DSA:1.20.1250.20 19 258 7.1E-32 T 15-10-2018 XDD1_1821 edfcc9db5c188f87e7a19cfb87a0fb28 133 Pfam PF01381 Helix-turn-helix 20 74 8.4E-17 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_1821 edfcc9db5c188f87e7a19cfb87a0fb28 133 SUPERFAMILY SSF47413 12 77 8.08E-19 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_1821 edfcc9db5c188f87e7a19cfb87a0fb28 133 SMART SM00530 19 74 3.2E-17 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_1821 edfcc9db5c188f87e7a19cfb87a0fb28 133 Gene3D G3DSA:1.10.260.40 12 79 2.5E-21 T 15-10-2018 XDD1_1289 24fcc9a1b916b139cd8085dfcf6f871e 509 Pfam PF00795 Carbon-nitrogen hydrolase 224 476 5.0E-38 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 XDD1_1289 24fcc9a1b916b139cd8085dfcf6f871e 509 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 456 8.1E-107 T 15-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 XDD1_1289 24fcc9a1b916b139cd8085dfcf6f871e 509 Gene3D G3DSA:3.60.110.10 250 477 5.5E-11 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XDD1_1289 24fcc9a1b916b139cd8085dfcf6f871e 509 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 494 24.14 T 15-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 XDD1_1289 24fcc9a1b916b139cd8085dfcf6f871e 509 SUPERFAMILY SSF56317 218 489 7.06E-40 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XDD1_1017 4853b0062953e9f86381addc4bdd0d38 302 SMART SM00342 211 294 8.1E-24 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_1017 4853b0062953e9f86381addc4bdd0d38 302 Pfam PF07883 Cupin domain 43 104 1.5E-7 T 15-10-2018 IPR013096 Cupin 2, conserved barrel XDD1_1017 4853b0062953e9f86381addc4bdd0d38 302 TIGRFAM TIGR02297 HpaA: 4-hydroxyphenylacetate catabolism regulatory protein HpaA 11 296 9.0E-113 T 15-10-2018 IPR011983 4-hydroxyphenylacetate catabolism regulatory protein HpaA XDD1_1017 4853b0062953e9f86381addc4bdd0d38 302 Pfam PF12833 Helix-turn-helix domain 217 296 5.4E-18 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_1017 4853b0062953e9f86381addc4bdd0d38 302 Gene3D G3DSA:1.10.10.60 193 300 3.6E-24 T 15-10-2018 XDD1_1017 4853b0062953e9f86381addc4bdd0d38 302 SUPERFAMILY SSF51182 34 107 4.45E-11 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily XDD1_1017 4853b0062953e9f86381addc4bdd0d38 302 Gene3D G3DSA:2.60.120.10 22 111 1.6E-8 T 15-10-2018 IPR014710 RmlC-like jelly roll fold XDD1_1017 4853b0062953e9f86381addc4bdd0d38 302 SUPERFAMILY SSF46689 249 297 9.41E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3277 a8003c7a1abc4451aa8b143c36778a09 188 SUPERFAMILY SSF56784 3 185 1.9E-53 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_3277 a8003c7a1abc4451aa8b143c36778a09 188 PIRSF PIRSF004682 1 188 8.5E-67 T 15-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 XDD1_3277 a8003c7a1abc4451aa8b143c36778a09 188 Gene3D G3DSA:3.40.50.1000 4 188 1.9E-65 T 15-10-2018 IPR023214 HAD superfamily XDD1_3277 a8003c7a1abc4451aa8b143c36778a09 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 150 2.2E-37 T 15-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 XDD1_3277 a8003c7a1abc4451aa8b143c36778a09 188 Pfam PF13242 HAD-hyrolase-like 109 179 6.8E-14 T 15-10-2018 XDD1_3277 a8003c7a1abc4451aa8b143c36778a09 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 180 1.6E-89 T 15-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 XDD1_3277 a8003c7a1abc4451aa8b143c36778a09 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 151 4.1E-40 T 15-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 XDD1_3142 0a937251a007da1d6cf731f90f5a283a 123 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 73 111 1.6E-9 T 15-10-2018 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 XDD1_0222 dbd4e2aeb67a3fa62dfad40b5638c446 289 Pfam PF00665 Integrase core domain 117 233 2.3E-25 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_0222 dbd4e2aeb67a3fa62dfad40b5638c446 289 Gene3D G3DSA:3.30.420.10 114 261 2.5E-12 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_0222 dbd4e2aeb67a3fa62dfad40b5638c446 289 SUPERFAMILY SSF53098 114 271 1.26E-35 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0257 dbd4e2aeb67a3fa62dfad40b5638c446 289 Pfam PF00665 Integrase core domain 117 233 2.3E-25 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_0257 dbd4e2aeb67a3fa62dfad40b5638c446 289 Gene3D G3DSA:3.30.420.10 114 261 2.5E-12 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_0257 dbd4e2aeb67a3fa62dfad40b5638c446 289 SUPERFAMILY SSF53098 114 271 1.26E-35 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3970 fd8391687a788b62c90c6125c7d4620b 269 PRINTS PR01374 Gram-negative bacterial tonB protein signature 188 209 9.5E-5 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XDD1_3970 fd8391687a788b62c90c6125c7d4620b 269 PRINTS PR01374 Gram-negative bacterial tonB protein signature 75 85 9.5E-5 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XDD1_3970 fd8391687a788b62c90c6125c7d4620b 269 PRINTS PR01374 Gram-negative bacterial tonB protein signature 209 227 9.5E-5 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XDD1_3970 fd8391687a788b62c90c6125c7d4620b 269 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 193 266 1.6E-18 T 15-10-2018 IPR037682 TonB, C-terminal GO:0055085 XDD1_3970 fd8391687a788b62c90c6125c7d4620b 269 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 194 268 9.2E-22 T 15-10-2018 IPR006260 TonB/TolA, C-terminal XDD1_3970 fd8391687a788b62c90c6125c7d4620b 269 SUPERFAMILY SSF74653 169 269 3.4E-23 T 15-10-2018 XDD1_2700 65e8d1294af735912400d8c6b0035b62 396 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 393 9.0E-59 T 15-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 XDD1_2700 65e8d1294af735912400d8c6b0035b62 396 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 1.3E-17 T 15-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 XDD1_2700 65e8d1294af735912400d8c6b0035b62 396 Pfam PF07670 Nucleoside recognition 92 190 3.8E-6 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 XDD1_2640 d250b59e9bceaef271a6e2f827b697c8 404 Gene3D G3DSA:3.40.47.10 6 257 2.4E-63 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2640 d250b59e9bceaef271a6e2f827b697c8 404 SMART SM00825 Beta-ketoacyl synthase 4 404 6.1E-14 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XDD1_2640 d250b59e9bceaef271a6e2f827b697c8 404 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site XDD1_2640 d250b59e9bceaef271a6e2f827b697c8 404 Gene3D G3DSA:3.40.47.10 258 404 9.0E-50 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2640 d250b59e9bceaef271a6e2f827b697c8 404 SUPERFAMILY SSF53901 213 402 2.18E-62 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2640 d250b59e9bceaef271a6e2f827b697c8 404 SUPERFAMILY SSF53901 1 251 2.13E-63 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 XDD1_2640 d250b59e9bceaef271a6e2f827b697c8 404 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 3.3E-40 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XDD1_2640 d250b59e9bceaef271a6e2f827b697c8 404 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 1.4E-29 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal XDD1_0370 5dd3c52bb944ec8773c292f07abe7500 304 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 94 7.0E-20 T 15-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 XDD1_0370 5dd3c52bb944ec8773c292f07abe7500 304 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 299 54.595 T 15-10-2018 IPR023009 Tyrosine recombinase XerC/XerD XDD1_0370 5dd3c52bb944ec8773c292f07abe7500 304 Pfam PF00589 Phage integrase family 117 285 2.0E-51 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XDD1_0370 5dd3c52bb944ec8773c292f07abe7500 304 Gene3D G3DSA:1.10.150.130 9 104 8.9E-19 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal XDD1_0370 5dd3c52bb944ec8773c292f07abe7500 304 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 13 301 1.6E-106 T 15-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 XDD1_0370 5dd3c52bb944ec8773c292f07abe7500 304 SUPERFAMILY SSF47823 12 103 3.53E-9 T 15-10-2018 XDD1_0370 5dd3c52bb944ec8773c292f07abe7500 304 SUPERFAMILY SSF56349 111 297 8.54E-55 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XDD1_0370 5dd3c52bb944ec8773c292f07abe7500 304 Gene3D G3DSA:1.10.443.10 116 293 2.9E-58 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XDD1_2674 606d92548b3b0716ae430d4f3efbd211 339 PIRSF PIRSF017020 1 339 6.3E-114 T 15-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 XDD1_2674 606d92548b3b0716ae430d4f3efbd211 339 SUPERFAMILY SSF53187 49 335 5.62E-72 T 15-10-2018 XDD1_2674 606d92548b3b0716ae430d4f3efbd211 339 Gene3D G3DSA:3.40.630.10 2 338 2.7E-106 T 15-10-2018 XDD1_2674 606d92548b3b0716ae430d4f3efbd211 339 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 27 334 3.8E-127 T 15-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 XDD1_2674 606d92548b3b0716ae430d4f3efbd211 339 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 57 335 1.2E-59 T 15-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 XDD1_2674 606d92548b3b0716ae430d4f3efbd211 339 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 339 125.05 T 15-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 XDD1_0253 a96ba0c0d0c5c9c117158cb643d7010d 305 SUPERFAMILY SSF53098 8 293 7.21E-22 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0253 a96ba0c0d0c5c9c117158cb643d7010d 305 Pfam PF13546 DDE superfamily endonuclease 3 153 4.3E-46 T 15-10-2018 IPR038721 Transposase IS701-like, DDE domain XDD1_0226 a96ba0c0d0c5c9c117158cb643d7010d 305 SUPERFAMILY SSF53098 8 293 7.21E-22 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0226 a96ba0c0d0c5c9c117158cb643d7010d 305 Pfam PF13546 DDE superfamily endonuclease 3 153 4.3E-46 T 15-10-2018 IPR038721 Transposase IS701-like, DDE domain XDD1_0845 50b96a3dfb3fd409e85c9f4cd300489f 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 127 177 1.4E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_0845 50b96a3dfb3fd409e85c9f4cd300489f 203 Gene3D G3DSA:1.10.10.10 105 186 5.9E-13 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0845 50b96a3dfb3fd409e85c9f4cd300489f 203 SUPERFAMILY SSF46894 111 182 7.48E-15 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XDD1_0845 50b96a3dfb3fd409e85c9f4cd300489f 203 SMART SM00421 124 181 5.6E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_1150 93f783d17c0cb0c2f2b91b0b4b0ae455 376 SMART SM00729 6 223 1.6E-46 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 XDD1_1150 93f783d17c0cb0c2f2b91b0b4b0ae455 376 Gene3D G3DSA:3.80.30.20 2 295 1.0E-98 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe XDD1_1150 93f783d17c0cb0c2f2b91b0b4b0ae455 376 Pfam PF06969 HemN C-terminal domain 305 364 2.1E-7 T 15-10-2018 IPR010723 HemN, C-terminal XDD1_1150 93f783d17c0cb0c2f2b91b0b4b0ae455 376 Pfam PF04055 Radical SAM superfamily 11 176 2.8E-16 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XDD1_1150 93f783d17c0cb0c2f2b91b0b4b0ae455 376 SUPERFAMILY SSF102114 5 376 6.15E-108 T 15-10-2018 XDD1_1150 93f783d17c0cb0c2f2b91b0b4b0ae455 376 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 1.2E-143 T 15-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 XDD1_1960 0ce6e9f66534806716b40833f25a300b 455 Gene3D G3DSA:3.90.1150.10 24 440 2.5E-133 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_1960 0ce6e9f66534806716b40833f25a300b 455 Gene3D G3DSA:3.40.640.10 70 337 2.5E-133 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_1960 0ce6e9f66534806716b40833f25a300b 455 SUPERFAMILY SSF53383 24 446 3.56E-122 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_1960 0ce6e9f66534806716b40833f25a300b 455 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 15 447 6.8E-207 T 15-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 XDD1_1960 0ce6e9f66534806716b40833f25a300b 455 Pfam PF00202 Aminotransferase class-III 34 445 1.3E-96 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_1960 0ce6e9f66534806716b40833f25a300b 455 PIRSF PIRSF000521 11 142 2.7E-5 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_1960 0ce6e9f66534806716b40833f25a300b 455 PIRSF PIRSF000521 135 448 3.5E-31 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_1960 0ce6e9f66534806716b40833f25a300b 455 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 256 293 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_0050 e5a6998abaa204b18514772a42f70ea0 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 46 315 1.9E-52 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 XDD1_1299 86b1877ee495937cb187c27d97cc4221 501 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 383 481 1.3E-23 T 15-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 XDD1_1299 86b1877ee495937cb187c27d97cc4221 501 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 492 5.5E-205 T 15-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 XDD1_1299 86b1877ee495937cb187c27d97cc4221 501 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 434 451 - T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 XDD1_1299 86b1877ee495937cb187c27d97cc4221 501 Gene3D G3DSA:3.30.1360.60 416 498 8.7E-26 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 XDD1_1299 86b1877ee495937cb187c27d97cc4221 501 Pfam PF00367 phosphotransferase system, EIIB 425 456 7.5E-13 T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 XDD1_1299 86b1877ee495937cb187c27d97cc4221 501 SUPERFAMILY SSF55604 422 495 2.22E-19 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 XDD1_1299 86b1877ee495937cb187c27d97cc4221 501 Pfam PF02378 Phosphotransferase system, EIIC 12 324 2.4E-73 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 XDD1_0807 4fd85d47c336627f7facab0fbfaa453b 104 SUPERFAMILY SSF52794 4 103 5.23E-26 T 15-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 XDD1_0807 4fd85d47c336627f7facab0fbfaa453b 104 Gene3D G3DSA:3.40.50.2300 1 104 8.7E-30 T 15-10-2018 XDD1_0807 4fd85d47c336627f7facab0fbfaa453b 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 96 5.3E-15 T 15-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 XDD1_2573 374bd641b190dd8a6aa817e3750ee731 678 Gene3D G3DSA:3.20.20.80 315 678 7.2E-146 T 15-10-2018 XDD1_2573 374bd641b190dd8a6aa817e3750ee731 678 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 324 651 2.8E-151 T 15-10-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal XDD1_2573 374bd641b190dd8a6aa817e3750ee731 678 Pfam PF01522 Polysaccharide deacetylase 109 276 6.7E-28 T 15-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 XDD1_2573 374bd641b190dd8a6aa817e3750ee731 678 Gene3D G3DSA:3.20.20.370 48 314 2.6E-76 T 15-10-2018 XDD1_2573 374bd641b190dd8a6aa817e3750ee731 678 SUPERFAMILY SSF88713 72 331 2.05E-40 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 XDD1_2573 374bd641b190dd8a6aa817e3750ee731 678 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 55 670 9.9E-275 T 15-10-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0043708 XDD1_3296 694f2135800ed410d4496a8628352313 342 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 1.7E-20 T 15-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 XDD1_3296 694f2135800ed410d4496a8628352313 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 5.6E-8 T 15-10-2018 IPR001451 Hexapeptide repeat XDD1_3296 694f2135800ed410d4496a8628352313 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 9.6E-6 T 15-10-2018 IPR001451 Hexapeptide repeat XDD1_3296 694f2135800ed410d4496a8628352313 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 3.7E-7 T 15-10-2018 IPR001451 Hexapeptide repeat XDD1_3296 694f2135800ed410d4496a8628352313 342 Gene3D G3DSA:3.40.1390.10 1 99 1.9E-33 T 15-10-2018 XDD1_3296 694f2135800ed410d4496a8628352313 342 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 4.1E-126 T 15-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 XDD1_3296 694f2135800ed410d4496a8628352313 342 SUPERFAMILY SSF51161 32 316 1.46E-86 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily XDD1_3296 694f2135800ed410d4496a8628352313 342 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XDD1_3296 694f2135800ed410d4496a8628352313 342 Gene3D G3DSA:2.160.10.10 100 309 1.6E-67 T 15-10-2018 XDD1_3296 694f2135800ed410d4496a8628352313 342 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XDD1_3296 694f2135800ed410d4496a8628352313 342 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.54 T 15-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 XDD1_2673 d9317df4d8ced0dad19586446ae241d6 447 SUPERFAMILY SSF55909 4 447 3.2E-200 T 15-10-2018 XDD1_2673 d9317df4d8ced0dad19586446ae241d6 447 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 447 58.931 T 15-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 XDD1_2673 d9317df4d8ced0dad19586446ae241d6 447 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 4 446 5.2E-232 T 15-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 XDD1_2673 d9317df4d8ced0dad19586446ae241d6 447 Pfam PF04996 Succinylarginine dihydrolase 4 446 3.4E-218 T 15-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 XDD1_2673 d9317df4d8ced0dad19586446ae241d6 447 Gene3D G3DSA:3.75.10.20 1 447 5.8E-208 T 15-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 XDD1_3752 cd8ccbc1c99e3f87138ee0ed24aa530f 1202 Pfam PF14331 ImcF-related N-terminal domain 214 465 5.1E-70 T 15-10-2018 IPR025743 ImcF-related, N-terminal domain XDD1_3752 cd8ccbc1c99e3f87138ee0ed24aa530f 1202 SUPERFAMILY SSF52540 139 293 8.47E-6 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3752 cd8ccbc1c99e3f87138ee0ed24aa530f 1202 Pfam PF06761 Intracellular multiplication and human macrophage-killing 519 846 1.5E-77 T 15-10-2018 IPR009612 ImcF-related XDD1_3752 cd8ccbc1c99e3f87138ee0ed24aa530f 1202 Pfam PF06744 Type VI secretion protein IcmF C-terminal 954 1150 5.5E-53 T 15-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal XDD1_3752 cd8ccbc1c99e3f87138ee0ed24aa530f 1202 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 37 1199 6.5E-302 T 15-10-2018 IPR017731 Type VI secretion system, IcmF XDD1_0597 0d3bb4c977a7b7ce11f382cc199f57cd 538 TIGRFAM TIGR02547 casA_cse1: CRISPR type I-E/ECOLI-associated protein CasA/Cse1 2 508 2.3E-127 T 15-10-2018 IPR013381 CRISPR-associated protein Cse1 XDD1_0597 0d3bb4c977a7b7ce11f382cc199f57cd 538 Pfam PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) 2 478 1.1E-94 T 15-10-2018 IPR013381 CRISPR-associated protein Cse1 XDD1_2849 8a5a4a2109ee37fc2782d34b22f16a3e 373 Pfam PF10758 Protein of unknown function (DUF2586) 2 366 5.5E-175 T 15-10-2018 IPR019694 Bacteriophage HP1, Orf23 XDD1_3437 8a5a4a2109ee37fc2782d34b22f16a3e 373 Pfam PF10758 Protein of unknown function (DUF2586) 2 366 5.5E-175 T 15-10-2018 IPR019694 Bacteriophage HP1, Orf23 XDD1_1874 afd6d60c06d47cd618df644aeb7f49af 579 PIRSF PIRSF002741 45 568 3.5E-92 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 XDD1_1874 afd6d60c06d47cd618df644aeb7f49af 579 Gene3D G3DSA:3.90.76.10 72 244 3.4E-140 T 15-10-2018 XDD1_1874 afd6d60c06d47cd618df644aeb7f49af 579 SUPERFAMILY SSF53850 62 563 5.97E-131 T 15-10-2018 XDD1_1874 afd6d60c06d47cd618df644aeb7f49af 579 Gene3D G3DSA:3.10.105.10 324 541 3.4E-140 T 15-10-2018 XDD1_1874 afd6d60c06d47cd618df644aeb7f49af 579 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 105 483 4.2E-88 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain XDD1_1874 afd6d60c06d47cd618df644aeb7f49af 579 Gene3D G3DSA:3.40.190.10 245 553 3.4E-140 T 15-10-2018 XDD1_2474 ddf0fa16d32f0c47df00a82159eac870 209 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 36 207 3.7E-58 T 15-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 XDD1_2474 ddf0fa16d32f0c47df00a82159eac870 209 Pfam PF00849 RNA pseudouridylate synthase 32 177 1.3E-15 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_2474 ddf0fa16d32f0c47df00a82159eac870 209 Gene3D G3DSA:3.30.70.1560 96 196 2.5E-42 T 15-10-2018 XDD1_2474 ddf0fa16d32f0c47df00a82159eac870 209 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 67 81 - T 15-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 XDD1_2474 ddf0fa16d32f0c47df00a82159eac870 209 SUPERFAMILY SSF55120 30 207 1.6E-44 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_2474 ddf0fa16d32f0c47df00a82159eac870 209 Gene3D G3DSA:3.30.70.580 20 95 3.1E-27 T 15-10-2018 XDD1_2323 eeae75c1d742870f96e2ca3a29801bd8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 2.5E-30 T 15-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 XDD1_2323 eeae75c1d742870f96e2ca3a29801bd8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 2.5E-30 T 15-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 XDD1_2323 eeae75c1d742870f96e2ca3a29801bd8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 2.5E-30 T 15-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 XDD1_2323 eeae75c1d742870f96e2ca3a29801bd8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 2.5E-30 T 15-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 XDD1_2323 eeae75c1d742870f96e2ca3a29801bd8 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 252 4.9E-72 T 15-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 XDD1_2323 eeae75c1d742870f96e2ca3a29801bd8 260 Pfam PF01311 Bacterial export proteins, family 1 15 247 8.1E-66 T 15-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 XDD1_0287 6ef7169399ba8dc101faeb9a46200b76 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 1.2E-39 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0287 6ef7169399ba8dc101faeb9a46200b76 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 1.2E-39 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0287 6ef7169399ba8dc101faeb9a46200b76 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 1.2E-39 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0287 6ef7169399ba8dc101faeb9a46200b76 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 1.2E-39 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0287 6ef7169399ba8dc101faeb9a46200b76 136 Gene3D G3DSA:3.90.1170.10 1 136 6.7E-55 T 15-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 XDD1_0287 6ef7169399ba8dc101faeb9a46200b76 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 15-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0287 6ef7169399ba8dc101faeb9a46200b76 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 9.1E-59 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0287 6ef7169399ba8dc101faeb9a46200b76 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 1.9E-46 T 15-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 XDD1_0287 6ef7169399ba8dc101faeb9a46200b76 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 38.142 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0287 6ef7169399ba8dc101faeb9a46200b76 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 15-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0287 6ef7169399ba8dc101faeb9a46200b76 136 SUPERFAMILY SSF54686 3 133 1.15E-54 T 15-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 XDD1_2155 bd82adf6b74b26ff1023d3b671109373 140 PIRSF PIRSF021320 1 139 7.3E-39 T 15-10-2018 IPR009326 Protein of unknown function DUF984 XDD1_2155 bd82adf6b74b26ff1023d3b671109373 140 SMART SM01022 21 136 2.4E-27 T 15-10-2018 IPR007374 ASCH domain XDD1_2155 bd82adf6b74b26ff1023d3b671109373 140 Pfam PF04266 ASCH domain 28 136 1.7E-19 T 15-10-2018 IPR007374 ASCH domain XDD1_2155 bd82adf6b74b26ff1023d3b671109373 140 Gene3D G3DSA:3.10.400.10 4 139 1.8E-39 T 15-10-2018 XDD1_2155 bd82adf6b74b26ff1023d3b671109373 140 SUPERFAMILY SSF88697 6 136 3.73E-39 T 15-10-2018 IPR015947 PUA-like superfamily XDD1_1656 b0f9f636bc0507ac7d3a0f49dbdc558b 329 Gene3D G3DSA:3.20.20.100 1 327 2.4E-119 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XDD1_1656 b0f9f636bc0507ac7d3a0f49dbdc558b 329 Pfam PF00248 Aldo/keto reductase family 16 307 5.8E-79 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain XDD1_1656 b0f9f636bc0507ac7d3a0f49dbdc558b 329 SUPERFAMILY SSF51430 1 309 8.25E-104 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XDD1_1351 017ab08ffaa8a3e9acc587a48366ae1e 229 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 4 224 43.279 T 15-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 XDD1_1351 017ab08ffaa8a3e9acc587a48366ae1e 229 Pfam PF01618 MotA/TolQ/ExbB proton channel family 78 207 2.6E-41 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel XDD1_1351 017ab08ffaa8a3e9acc587a48366ae1e 229 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 5.7E-94 T 15-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 XDD1_1885 9d3d18ebf8e1f4421a0faa01ecdf0813 372 Pfam PF06996 Type VI secretion, TssG 26 351 4.7E-98 T 15-10-2018 IPR010732 Type VI secretion, TssG-like XDD1_1885 9d3d18ebf8e1f4421a0faa01ecdf0813 372 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 25 351 1.3E-88 T 15-10-2018 IPR010732 Type VI secretion, TssG-like XDD1_1251 7ff5fd65d42ccad68f350a48319a3878 116 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 11 110 1.8E-16 T 15-10-2018 IPR008407 Branched-chain amino acid transport, AzlD XDD1_3626 8003a1323d902195116a528dbeba333c 217 Gene3D G3DSA:3.40.50.1000 7 194 1.1E-35 T 15-10-2018 IPR023214 HAD superfamily XDD1_3626 8003a1323d902195116a528dbeba333c 217 Gene3D G3DSA:1.10.150.240 16 82 1.1E-35 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 XDD1_3626 8003a1323d902195116a528dbeba333c 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 181 8.5E-26 T 15-10-2018 XDD1_3626 8003a1323d902195116a528dbeba333c 217 SUPERFAMILY SSF56784 1 210 5.56E-36 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_3626 8003a1323d902195116a528dbeba333c 217 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 87 182 6.5E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XDD1_3106 53385b016c5de5de36fdc7d1adf3ecae 294 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 10 274 7.6E-109 T 15-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 XDD1_3106 53385b016c5de5de36fdc7d1adf3ecae 294 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 13 240 3.9E-47 T 15-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 XDD1_3106 53385b016c5de5de36fdc7d1adf3ecae 294 Gene3D G3DSA:3.40.50.620 85 222 4.9E-109 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_3106 53385b016c5de5de36fdc7d1adf3ecae 294 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 10 294 38.785 T 15-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 XDD1_3106 53385b016c5de5de36fdc7d1adf3ecae 294 SUPERFAMILY SSF52374 10 289 8.45E-84 T 15-10-2018 XDD1_3106 53385b016c5de5de36fdc7d1adf3ecae 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 27 38 2.3E-14 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XDD1_3106 53385b016c5de5de36fdc7d1adf3ecae 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 174 184 2.3E-14 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XDD1_3106 53385b016c5de5de36fdc7d1adf3ecae 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 190 198 2.3E-14 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XDD1_3106 53385b016c5de5de36fdc7d1adf3ecae 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 13 25 2.3E-14 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XDD1_3106 53385b016c5de5de36fdc7d1adf3ecae 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 42 55 2.3E-14 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XDD1_3106 53385b016c5de5de36fdc7d1adf3ecae 294 Gene3D G3DSA:3.40.50.620 10 288 4.9E-109 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_1549 b415d664a09d0688e9c748fa9c0330e7 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 1.2E-34 T 15-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 XDD1_1549 b415d664a09d0688e9c748fa9c0330e7 106 Gene3D G3DSA:3.30.1390.10 1 106 3.3E-45 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like XDD1_1549 b415d664a09d0688e9c748fa9c0330e7 106 SUPERFAMILY SSF54736 21 104 5.02E-33 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like XDD1_1549 b415d664a09d0688e9c748fa9c0330e7 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 6 101 28.448 T 15-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS XDD1_3757 e5a15bcc169e2d70391aaa6c0188e6dd 256 Gene3D G3DSA:1.25.40.590 32 191 1.2E-51 T 15-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily XDD1_3757 e5a15bcc169e2d70391aaa6c0188e6dd 256 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 35 244 8.6E-63 T 15-10-2018 IPR017732 Type IV / VI secretion system, DotU XDD1_3757 e5a15bcc169e2d70391aaa6c0188e6dd 256 Pfam PF09850 Type VI secretion system protein DotU 36 237 6.0E-58 T 15-10-2018 IPR017732 Type IV / VI secretion system, DotU XDD1_1602 b7bd128c8d770d8ef585f143a49374c3 554 Pfam PF02470 MlaD protein 166 242 7.1E-10 T 15-10-2018 IPR003399 Mce/MlaD XDD1_1602 b7bd128c8d770d8ef585f143a49374c3 554 Pfam PF02470 MlaD protein 295 396 9.8E-16 T 15-10-2018 IPR003399 Mce/MlaD XDD1_1602 b7bd128c8d770d8ef585f143a49374c3 554 Pfam PF02470 MlaD protein 50 141 7.8E-10 T 15-10-2018 IPR003399 Mce/MlaD XDD1_3167 507f6047cc427498b4c2e98878fdd184 199 Gene3D G3DSA:3.40.50.300 3 199 3.0E-77 T 15-10-2018 XDD1_3167 507f6047cc427498b4c2e98878fdd184 199 Pfam PF01583 Adenylylsulphate kinase 27 177 4.0E-73 T 15-10-2018 XDD1_3167 507f6047cc427498b4c2e98878fdd184 199 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 8 188 7.7E-83 T 15-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 XDD1_3167 507f6047cc427498b4c2e98878fdd184 199 SUPERFAMILY SSF52540 23 192 7.25E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3167 507f6047cc427498b4c2e98878fdd184 199 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 24 195 37.993 T 15-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 XDD1_0339 a3e16adac7201a2f4853babbe1ed244a 371 Gene3D G3DSA:3.40.800.20 2 371 1.5E-139 T 15-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 XDD1_0339 a3e16adac7201a2f4853babbe1ed244a 371 SUPERFAMILY SSF52768 3 341 3.45E-102 T 15-10-2018 IPR023696 Ureohydrolase domain superfamily XDD1_0339 a3e16adac7201a2f4853babbe1ed244a 371 Pfam PF00850 Histone deacetylase domain 43 328 5.2E-78 T 15-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 XDD1_0339 a3e16adac7201a2f4853babbe1ed244a 371 PRINTS PR01270 Histone deacetylase superfamily signature 175 190 4.6E-16 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 XDD1_0339 a3e16adac7201a2f4853babbe1ed244a 371 PRINTS PR01270 Histone deacetylase superfamily signature 260 270 4.6E-16 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 XDD1_0339 a3e16adac7201a2f4853babbe1ed244a 371 PRINTS PR01270 Histone deacetylase superfamily signature 141 164 4.6E-16 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 XDD1_1155 8089fe38c3c3126272ddcf0d786b9d18 331 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 195 209 - T 15-10-2018 IPR001482 Type II/IV secretion system protein XDD1_1155 8089fe38c3c3126272ddcf0d786b9d18 331 Pfam PF00437 Type II/IV secretion system protein 12 263 2.0E-41 T 15-10-2018 IPR001482 Type II/IV secretion system protein XDD1_1155 8089fe38c3c3126272ddcf0d786b9d18 331 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 329 3.2E-126 T 15-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 XDD1_1155 8089fe38c3c3126272ddcf0d786b9d18 331 Gene3D G3DSA:3.40.50.300 102 331 4.5E-86 T 15-10-2018 XDD1_1155 8089fe38c3c3126272ddcf0d786b9d18 331 SUPERFAMILY SSF52540 4 329 1.12E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1155 8089fe38c3c3126272ddcf0d786b9d18 331 Gene3D G3DSA:3.30.450.90 1 100 2.4E-24 T 15-10-2018 XDD1_0538 76253c147bfdc1889c849a11e3716eb3 90 Gene3D G3DSA:1.20.5.780 5 87 2.9E-11 T 15-10-2018 XDD1_0538 76253c147bfdc1889c849a11e3716eb3 90 SUPERFAMILY SSF47598 6 83 3.11E-20 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XDD1_0538 76253c147bfdc1889c849a11e3716eb3 90 Pfam PF08681 Protein of unknown function (DUF1778) 10 83 2.8E-22 T 15-10-2018 IPR014795 Vibrio phage ICP1, Orf50 XDD1_2232 3249563872783c41dca4a741d8936aeb 302 SUPERFAMILY SSF161098 100 283 6.93E-24 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_2232 3249563872783c41dca4a741d8936aeb 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 76 2.3E-13 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain XDD1_2232 3249563872783c41dca4a741d8936aeb 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 300 1.8E-26 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_2232 3249563872783c41dca4a741d8936aeb 302 Gene3D G3DSA:1.10.3720.10 100 298 1.4E-16 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_3440 4c358b2e4b6d3a718e51f2691f0a92a0 150 Pfam PF05926 Phage head completion protein (GPL) 14 150 5.9E-44 T 15-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 XDD1_3464 7320acd34e44a53dbe35b578887c2762 187 Pfam PF04279 Intracellular septation protein A 20 180 5.0E-6 T 15-10-2018 IPR006008 Intracellular septation protein A GO:0016021 XDD1_2507 5d92896a37b59caed66d77a9193dcd1c 56 Pfam PF01783 Ribosomal L32p protein family 2 56 1.6E-19 T 15-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_2507 5d92896a37b59caed66d77a9193dcd1c 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 1.0E-19 T 15-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_2507 5d92896a37b59caed66d77a9193dcd1c 56 SUPERFAMILY SSF57829 2 55 1.1E-18 T 15-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 XDD1_2507 5d92896a37b59caed66d77a9193dcd1c 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.09 T 15-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0953 ba5a457d75e92854b213f80071e411ee 112 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 60 101 8.7E-8 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 XDD1_2620 21612df89ddb83f112cc940bb89f5d02 98 Pfam PF04175 Protein of unknown function (DUF406) 8 98 5.0E-38 T 15-10-2018 IPR005272 Conserved hypothetical protein CHP00743 XDD1_2620 21612df89ddb83f112cc940bb89f5d02 98 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 5 98 8.2E-39 T 15-10-2018 IPR005272 Conserved hypothetical protein CHP00743 XDD1_2620 21612df89ddb83f112cc940bb89f5d02 98 Gene3D G3DSA:3.30.70.860 27 98 5.7E-25 T 15-10-2018 IPR035571 UPF0234-like, C-terminal XDD1_3355 2b650f9daa5102b5a471cdf6ade006ad 152 Pfam PF02657 Fe-S metabolism associated domain 24 145 8.9E-39 T 15-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like XDD1_3355 2b650f9daa5102b5a471cdf6ade006ad 152 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 10 147 1.8E-68 T 15-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE XDD1_3355 2b650f9daa5102b5a471cdf6ade006ad 152 SUPERFAMILY SSF82649 8 147 3.19E-43 T 15-10-2018 XDD1_3355 2b650f9daa5102b5a471cdf6ade006ad 152 Gene3D G3DSA:3.90.1010.10 2 149 1.1E-47 T 15-10-2018 XDD1_2789 b1db53f9bf1d171fe489e2ed906ea991 261 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 19 258 1.6E-86 T 15-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 XDD1_2789 b1db53f9bf1d171fe489e2ed906ea991 261 PIRSF PIRSF004808 16 261 1.9E-76 T 15-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 XDD1_2789 b1db53f9bf1d171fe489e2ed906ea991 261 Gene3D G3DSA:1.10.8.590 184 261 2.8E-30 T 15-10-2018 XDD1_2789 b1db53f9bf1d171fe489e2ed906ea991 261 Pfam PF00588 SpoU rRNA Methylase family 23 172 6.6E-33 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 XDD1_2789 b1db53f9bf1d171fe489e2ed906ea991 261 Gene3D G3DSA:3.40.1280.10 18 182 4.2E-63 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XDD1_2789 b1db53f9bf1d171fe489e2ed906ea991 261 SUPERFAMILY SSF75217 21 183 1.96E-38 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases XDD1_2345 5769cbc718562b63fad2ed336b60ce30 852 Pfam PF13954 PapC N-terminal domain 34 177 2.7E-35 T 15-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 XDD1_2345 5769cbc718562b63fad2ed336b60ce30 852 Pfam PF00577 Outer membrane usher protein 192 752 1.7E-176 T 15-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 XDD1_2345 5769cbc718562b63fad2ed336b60ce30 852 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 312 322 - T 15-10-2018 IPR018030 Fimbrial membrane usher, conserved site XDD1_2345 5769cbc718562b63fad2ed336b60ce30 852 Gene3D G3DSA:2.60.40.3110 270 359 7.9E-38 T 15-10-2018 XDD1_2345 5769cbc718562b63fad2ed336b60ce30 852 Gene3D G3DSA:3.10.20.410 50 165 1.2E-28 T 15-10-2018 XDD1_2345 5769cbc718562b63fad2ed336b60ce30 852 SUPERFAMILY SSF141729 59 168 5.89E-25 T 15-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 XDD1_2345 5769cbc718562b63fad2ed336b60ce30 852 Gene3D G3DSA:2.60.40.2610 667 757 2.2E-30 T 15-10-2018 XDD1_2345 5769cbc718562b63fad2ed336b60ce30 852 Gene3D G3DSA:2.60.40.2070 758 852 1.5E-22 T 15-10-2018 XDD1_2345 5769cbc718562b63fad2ed336b60ce30 852 Pfam PF13953 PapC C-terminal domain 761 838 2.1E-20 T 15-10-2018 IPR025949 PapC-like, C-terminal domain XDD1_1089 6fa2e72a766f866fee54c16ce2afb74d 110 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 25 104 1.6E-26 T 15-10-2018 IPR019110 Uncharacterised protein family, RAQPRD XDD1_1089 6fa2e72a766f866fee54c16ce2afb74d 110 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 14 106 5.1E-25 T 15-10-2018 IPR019110 Uncharacterised protein family, RAQPRD XDD1_2778 2c50e450d1989a6bf6a44f0fe1747121 1684 PIRSF PIRSF038980 10 1684 0.0 T 15-10-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria XDD1_2778 2c50e450d1989a6bf6a44f0fe1747121 1684 SMART SM01360 999 1088 1.0E-18 T 15-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 XDD1_2778 2c50e450d1989a6bf6a44f0fe1747121 1684 SMART SM01359 786 935 1.5E-33 T 15-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 XDD1_2778 2c50e450d1989a6bf6a44f0fe1747121 1684 Gene3D G3DSA:2.60.40.1930 412 507 3.4E-5 T 15-10-2018 XDD1_2778 2c50e450d1989a6bf6a44f0fe1747121 1684 Pfam PF01835 MG2 domain 412 503 2.0E-19 T 15-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 XDD1_2778 2c50e450d1989a6bf6a44f0fe1747121 1684 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 313 406 1.6E-19 T 15-10-2018 XDD1_2778 2c50e450d1989a6bf6a44f0fe1747121 1684 Gene3D G3DSA:1.50.10.20 1203 1474 1.5E-23 T 15-10-2018 XDD1_2778 2c50e450d1989a6bf6a44f0fe1747121 1684 SUPERFAMILY SSF48239 1208 1463 7.59E-37 T 15-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid XDD1_2778 2c50e450d1989a6bf6a44f0fe1747121 1684 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 787 934 3.3E-13 T 15-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 XDD1_2778 2c50e450d1989a6bf6a44f0fe1747121 1684 Pfam PF00207 Alpha-2-macroglobulin family 1006 1082 1.5E-7 T 15-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 XDD1_2778 2c50e450d1989a6bf6a44f0fe1747121 1684 Pfam PF07678 A-macroglobulin complement component 1257 1337 7.6E-5 T 15-10-2018 IPR011626 Alpha-macroglobulin complement component GO:0005615 XDD1_0876 9e3c2663f8660b88540ea324cc98fcb5 207 SUPERFAMILY SSF52096 24 206 9.32E-74 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XDD1_0876 9e3c2663f8660b88540ea324cc98fcb5 207 Pfam PF00574 Clp protease 26 205 1.5E-88 T 15-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA XDD1_0876 9e3c2663f8660b88540ea324cc98fcb5 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 15-10-2018 IPR018215 ClpP, Ser active site XDD1_0876 9e3c2663f8660b88540ea324cc98fcb5 207 Gene3D G3DSA:3.90.226.10 5 207 2.9E-83 T 15-10-2018 XDD1_0876 9e3c2663f8660b88540ea324cc98fcb5 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 43.967 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XDD1_0876 9e3c2663f8660b88540ea324cc98fcb5 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 15-10-2018 IPR033135 ClpP, histidine active site XDD1_0876 9e3c2663f8660b88540ea324cc98fcb5 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 3.9E-53 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XDD1_0876 9e3c2663f8660b88540ea324cc98fcb5 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 3.9E-53 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XDD1_0876 9e3c2663f8660b88540ea324cc98fcb5 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 3.9E-53 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XDD1_0876 9e3c2663f8660b88540ea324cc98fcb5 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 3.9E-53 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XDD1_0876 9e3c2663f8660b88540ea324cc98fcb5 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 3.9E-53 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XDD1_0876 9e3c2663f8660b88540ea324cc98fcb5 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 204 1.3E-108 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XDD1_1776 f54af41b4ec991caae632b98ec056484 327 SUPERFAMILY SSF46589 14 99 4.18E-21 T 15-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 XDD1_1776 f54af41b4ec991caae632b98ec056484 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.346 T 15-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 XDD1_1776 f54af41b4ec991caae632b98ec056484 327 Gene3D G3DSA:3.30.930.10 8 327 7.0E-123 T 15-10-2018 XDD1_1776 f54af41b4ec991caae632b98ec056484 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 3.2E-24 T 15-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 XDD1_1776 f54af41b4ec991caae632b98ec056484 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 3.4E-117 T 15-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 XDD1_1776 f54af41b4ec991caae632b98ec056484 327 SUPERFAMILY SSF55681 91 327 1.55E-81 T 15-10-2018 XDD1_1776 f54af41b4ec991caae632b98ec056484 327 Pfam PF01409 tRNA synthetases class II core domain (F) 91 326 6.9E-108 T 15-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 XDD1_3494 b79a7a00a64984989f94d6117b8b63ce 191 Pfam PF04972 BON domain 46 113 1.4E-12 T 15-10-2018 IPR007055 BON domain XDD1_3494 b79a7a00a64984989f94d6117b8b63ce 191 Pfam PF04972 BON domain 125 189 1.2E-14 T 15-10-2018 IPR007055 BON domain XDD1_3494 b79a7a00a64984989f94d6117b8b63ce 191 SMART SM00749 51 114 3.4E-11 T 15-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria XDD1_3494 b79a7a00a64984989f94d6117b8b63ce 191 SMART SM00749 129 190 7.5E-4 T 15-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria XDD1_2239 a3f31365866b3a88ca0f446191d5f871 336 Gene3D G3DSA:3.40.50.720 4 316 6.6E-96 T 15-10-2018 XDD1_2239 a3f31365866b3a88ca0f446191d5f871 336 SUPERFAMILY SSF51735 1 333 1.33E-85 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2239 a3f31365866b3a88ca0f446191d5f871 336 Gene3D G3DSA:3.90.25.10 180 328 6.6E-96 T 15-10-2018 XDD1_2239 a3f31365866b3a88ca0f446191d5f871 336 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 8.1E-28 T 15-10-2018 XDD1_2239 a3f31365866b3a88ca0f446191d5f871 336 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 8.1E-28 T 15-10-2018 XDD1_2239 a3f31365866b3a88ca0f446191d5f871 336 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 8.1E-28 T 15-10-2018 XDD1_2239 a3f31365866b3a88ca0f446191d5f871 336 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 8.1E-28 T 15-10-2018 XDD1_2239 a3f31365866b3a88ca0f446191d5f871 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 2.0E-53 T 15-10-2018 IPR016040 NAD(P)-binding domain XDD1_2515 25bc2f6c42d3b0ce21f42c2a59243bdf 581 Gene3D G3DSA:3.30.70.610 269 344 8.5E-19 T 15-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 XDD1_2515 25bc2f6c42d3b0ce21f42c2a59243bdf 581 Gene3D G3DSA:3.30.70.610 364 434 7.1E-18 T 15-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 XDD1_2515 25bc2f6c42d3b0ce21f42c2a59243bdf 581 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 10 568 58.712 T 15-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 XDD1_2515 25bc2f6c42d3b0ce21f42c2a59243bdf 581 Gene3D G3DSA:3.30.465.10 106 268 6.2E-75 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 XDD1_2515 25bc2f6c42d3b0ce21f42c2a59243bdf 581 Gene3D G3DSA:3.30.43.10 2 103 5.1E-12 T 15-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 XDD1_2515 25bc2f6c42d3b0ce21f42c2a59243bdf 581 SUPERFAMILY SSF56176 10 271 7.63E-70 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XDD1_2515 25bc2f6c42d3b0ce21f42c2a59243bdf 581 PIRSF PIRSF000101 4 569 2.1E-293 T 15-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 XDD1_2515 25bc2f6c42d3b0ce21f42c2a59243bdf 581 Gene3D G3DSA:3.30.1370.20 435 519 1.8E-40 T 15-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 XDD1_2515 25bc2f6c42d3b0ce21f42c2a59243bdf 581 Pfam PF09330 D-lactate dehydrogenase, membrane binding 278 567 5.4E-147 T 15-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 XDD1_2515 25bc2f6c42d3b0ce21f42c2a59243bdf 581 Pfam PF01565 FAD binding domain 47 166 6.6E-7 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 XDD1_2515 25bc2f6c42d3b0ce21f42c2a59243bdf 581 SUPERFAMILY SSF55103 276 567 2.18E-114 T 15-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 XDD1_1262 a78737dd9d38d7247a0e9a1457740ff3 349 SMART SM00729 112 321 1.2E-16 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 XDD1_1262 a78737dd9d38d7247a0e9a1457740ff3 349 TIGRFAM TIGR00510 lipA: lipoyl synthase 49 349 3.6E-160 T 15-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XDD1_1262 a78737dd9d38d7247a0e9a1457740ff3 349 Hamap MF_00206 Lipoyl synthase [lipA]. 64 349 152.958 T 15-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XDD1_1262 a78737dd9d38d7247a0e9a1457740ff3 349 Pfam PF04055 Radical SAM superfamily 119 279 9.2E-16 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XDD1_1262 a78737dd9d38d7247a0e9a1457740ff3 349 SUPERFAMILY SSF102114 81 344 3.79E-69 T 15-10-2018 XDD1_1262 a78737dd9d38d7247a0e9a1457740ff3 349 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 57 101 2.2E-6 T 15-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XDD1_1262 a78737dd9d38d7247a0e9a1457740ff3 349 Gene3D G3DSA:3.20.20.70 110 325 8.1E-22 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_1262 a78737dd9d38d7247a0e9a1457740ff3 349 PIRSF PIRSF005963 5 348 3.5E-133 T 15-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XDD1_1390 ec28d8598ef4e8d4213cd4c169b75a7c 367 Gene3D G3DSA:3.40.50.300 4 350 7.7E-33 T 15-10-2018 XDD1_1390 ec28d8598ef4e8d4213cd4c169b75a7c 367 SUPERFAMILY SSF52540 4 353 2.74E-30 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1390 ec28d8598ef4e8d4213cd4c169b75a7c 367 PIRSF PIRSF029347 109 350 7.5E-32 T 15-10-2018 IPR014555 RecF-like XDD1_1390 ec28d8598ef4e8d4213cd4c169b75a7c 367 PIRSF PIRSF029347 3 98 6.7E-14 T 15-10-2018 IPR014555 RecF-like XDD1_1390 ec28d8598ef4e8d4213cd4c169b75a7c 367 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 27 315 4.0E-35 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_1780 e342a5747b899b9fa023adf89795fbc6 326 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 1 325 62.491 T 15-10-2018 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53 XDD1_1780 e342a5747b899b9fa023adf89795fbc6 326 SUPERFAMILY SSF53448 7 229 8.66E-42 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_1780 e342a5747b899b9fa023adf89795fbc6 326 Gene3D G3DSA:3.90.550.10 2 230 6.4E-43 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_1780 e342a5747b899b9fa023adf89795fbc6 326 Pfam PF00535 Glycosyl transferase family 2 10 169 6.1E-36 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XDD1_0488 bc14ba613b6a6fb148f6de453dbe4928 565 Pfam PF06580 Histidine kinase 371 447 2.0E-23 T 15-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 XDD1_0488 bc14ba613b6a6fb148f6de453dbe4928 565 Pfam PF07694 5TMR of 5TMR-LYT 27 196 2.1E-57 T 15-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 XDD1_0488 bc14ba613b6a6fb148f6de453dbe4928 565 SMART SM00065 218 365 5.9E-5 T 15-10-2018 IPR003018 GAF domain GO:0005515 XDD1_0488 bc14ba613b6a6fb148f6de453dbe4928 565 SUPERFAMILY SSF55874 426 557 9.75E-12 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_0488 bc14ba613b6a6fb148f6de453dbe4928 565 Gene3D G3DSA:3.30.565.10 424 564 1.2E-13 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_0488 bc14ba613b6a6fb148f6de453dbe4928 565 SUPERFAMILY SSF55781 248 357 1.96E-6 T 15-10-2018 XDD1_0488 bc14ba613b6a6fb148f6de453dbe4928 565 Pfam PF13492 GAF domain 243 355 1.6E-6 T 15-10-2018 IPR003018 GAF domain GO:0005515 XDD1_1011 53c8968758e2567e79b002e5c8c747e9 385 SUPERFAMILY SSF56796 12 319 1.57E-56 T 15-10-2018 XDD1_1011 53c8968758e2567e79b002e5c8c747e9 385 Gene3D G3DSA:3.40.50.1970 1 195 1.0E-32 T 15-10-2018 XDD1_1011 53c8968758e2567e79b002e5c8c747e9 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 16 309 1.0E-53 T 15-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 XDD1_1011 53c8968758e2567e79b002e5c8c747e9 385 Gene3D G3DSA:1.20.1090.10 197 379 2.5E-20 T 15-10-2018 XDD1_1987 3e1510ad412862b0dc0a0f95b2b0a631 649 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 35 645 5.3E-199 T 15-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ XDD1_1987 3e1510ad412862b0dc0a0f95b2b0a631 649 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 134 567 6.9E-95 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit XDD1_1473 2720ffaa8d05220d9e437a07c5500109 257 Gene3D G3DSA:3.40.50.150 16 200 8.0E-34 T 15-10-2018 XDD1_1473 2720ffaa8d05220d9e437a07c5500109 257 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 16 254 5.4E-65 T 15-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 XDD1_1473 2720ffaa8d05220d9e437a07c5500109 257 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 8 255 28.39 T 15-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 XDD1_1473 2720ffaa8d05220d9e437a07c5500109 257 SUPERFAMILY SSF53335 14 235 2.17E-38 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_1473 2720ffaa8d05220d9e437a07c5500109 257 Pfam PF08241 Methyltransferase domain 52 143 2.6E-24 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 XDD1_2865 c468a6d26f1c5f8576734ab4e7b1b2d8 67 Pfam PF10809 Protein of unknown function (DUF2732) 5 63 2.1E-11 T 15-10-2018 IPR020126 Protein of unknown function DUF2732 XDD1_3452 c468a6d26f1c5f8576734ab4e7b1b2d8 67 Pfam PF10809 Protein of unknown function (DUF2732) 5 63 2.1E-11 T 15-10-2018 IPR020126 Protein of unknown function DUF2732 XDD1_2725 868ed1985c86aafc6116be420f57138f 278 Gene3D G3DSA:1.10.3720.10 4 264 3.9E-45 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_2725 868ed1985c86aafc6116be420f57138f 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 261 5.5E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_2725 868ed1985c86aafc6116be420f57138f 278 SUPERFAMILY SSF161098 8 271 1.78E-53 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_0661 143cc70e77f848acacc0435586933d2b 392 Gene3D G3DSA:3.40.710.10 38 387 5.6E-113 T 15-10-2018 XDD1_0661 143cc70e77f848acacc0435586933d2b 392 Pfam PF00144 Beta-lactamase 56 370 8.7E-61 T 15-10-2018 IPR001466 Beta-lactamase-related XDD1_0661 143cc70e77f848acacc0435586933d2b 392 SUPERFAMILY SSF56601 43 366 8.53E-66 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XDD1_3384 0fb9c2b8cfed668b9511becc67225889 274 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 273 39.335 T 15-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 XDD1_3384 0fb9c2b8cfed668b9511becc67225889 274 Gene3D G3DSA:1.10.287.110 194 271 1.9E-14 T 15-10-2018 IPR036869 Chaperone J-domain superfamily XDD1_3384 0fb9c2b8cfed668b9511becc67225889 274 Pfam PF05099 Tellurite resistance protein TerB 42 170 4.0E-13 T 15-10-2018 IPR007791 Co-chaperone DjlA, N-terminal XDD1_3384 0fb9c2b8cfed668b9511becc67225889 274 PRINTS PR00625 DnaJ domain signature 252 272 3.0E-6 T 15-10-2018 IPR001623 DnaJ domain XDD1_3384 0fb9c2b8cfed668b9511becc67225889 274 PRINTS PR00625 DnaJ domain signature 228 243 3.0E-6 T 15-10-2018 IPR001623 DnaJ domain XDD1_3384 0fb9c2b8cfed668b9511becc67225889 274 PRINTS PR00625 DnaJ domain signature 210 228 3.0E-6 T 15-10-2018 IPR001623 DnaJ domain XDD1_3384 0fb9c2b8cfed668b9511becc67225889 274 Gene3D G3DSA:1.10.3680.10 45 190 1.8E-21 T 15-10-2018 IPR029024 TerB-like XDD1_3384 0fb9c2b8cfed668b9511becc67225889 274 SUPERFAMILY SSF46565 131 270 4.92E-29 T 15-10-2018 IPR036869 Chaperone J-domain superfamily XDD1_3384 0fb9c2b8cfed668b9511becc67225889 274 Pfam PF00226 DnaJ domain 211 270 7.6E-10 T 15-10-2018 IPR001623 DnaJ domain XDD1_3384 0fb9c2b8cfed668b9511becc67225889 274 SMART SM00271 207 272 3.9E-15 T 15-10-2018 IPR001623 DnaJ domain XDD1_1060 4b9983cda603681688caa082c4984e88 235 Pfam PF01300 Telomere recombination 16 201 9.6E-24 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 XDD1_1060 4b9983cda603681688caa082c4984e88 235 Gene3D G3DSA:3.90.870.10 2 217 1.8E-36 T 15-10-2018 XDD1_1060 4b9983cda603681688caa082c4984e88 235 SUPERFAMILY SSF55821 11 207 4.27E-30 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily XDD1_1733 8d621db5c21209a7cca44e08096fb46c 189 Pfam PF00293 NUDIX domain 28 140 1.9E-11 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XDD1_1733 8d621db5c21209a7cca44e08096fb46c 189 SUPERFAMILY SSF55811 21 178 1.49E-33 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XDD1_1733 8d621db5c21209a7cca44e08096fb46c 189 ProSitePatterns PS01293 Nudix CoA signature. 44 64 - T 15-10-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918|Reactome: R-HSA-9033241 XDD1_1733 8d621db5c21209a7cca44e08096fb46c 189 Gene3D G3DSA:3.90.79.10 6 186 6.1E-48 T 15-10-2018 XDD1_3394 550c4e50273eed1668506990aa9ca378 244 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 1.3E-46 T 15-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 XDD1_3394 550c4e50273eed1668506990aa9ca378 244 SMART SM00563 67 182 4.1E-38 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XDD1_3394 550c4e50273eed1668506990aa9ca378 244 SUPERFAMILY SSF69593 8 236 5.23E-60 T 15-10-2018 XDD1_3394 550c4e50273eed1668506990aa9ca378 244 Pfam PF01553 Acyltransferase 59 180 8.3E-33 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XDD1_2255 998d863be6e5d9825bde0402cc062919 293 Gene3D G3DSA:2.70.98.10 1 286 2.1E-89 T 15-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 XDD1_2255 998d863be6e5d9825bde0402cc062919 293 SUPERFAMILY SSF74650 7 276 5.21E-72 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 XDD1_2255 998d863be6e5d9825bde0402cc062919 293 PIRSF PIRSF016020 12 279 6.4E-52 T 15-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 XDD1_2255 998d863be6e5d9825bde0402cc062919 293 Pfam PF01263 Aldose 1-epimerase 28 269 2.6E-42 T 15-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 XDD1_3516 0cad7a8e416453682bf54585504871a0 84 Gene3D G3DSA:3.30.300.90 1 84 2.5E-35 T 15-10-2018 XDD1_3516 0cad7a8e416453682bf54585504871a0 84 Pfam PF01722 BolA-like protein 22 74 9.2E-15 T 15-10-2018 IPR002634 BolA protein XDD1_3516 0cad7a8e416453682bf54585504871a0 84 PIRSF PIRSF003113 1 83 7.6E-23 T 15-10-2018 IPR002634 BolA protein XDD1_3516 0cad7a8e416453682bf54585504871a0 84 SUPERFAMILY SSF82657 1 81 4.84E-29 T 15-10-2018 IPR036065 BolA-like superfamily XDD1_0161 d590aab16200be2e6809aa21e57a867e 397 Gene3D G3DSA:3.40.50.2000 7 207 3.2E-12 T 15-10-2018 XDD1_0161 d590aab16200be2e6809aa21e57a867e 397 Gene3D G3DSA:3.40.50.2000 208 383 4.9E-20 T 15-10-2018 XDD1_0161 d590aab16200be2e6809aa21e57a867e 397 Pfam PF00534 Glycosyl transferases group 1 216 375 3.5E-12 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 XDD1_0161 d590aab16200be2e6809aa21e57a867e 397 SUPERFAMILY SSF53756 18 394 3.24E-36 T 15-10-2018 XDD1_1916 437975343eea43f4a84184244822b701 2033 Pfam PF13087 AAA domain 1739 1932 5.0E-21 T 15-10-2018 XDD1_1916 437975343eea43f4a84184244822b701 2033 Pfam PF13195 Protein of unknown function (DUF4011) 742 846 2.1E-10 T 15-10-2018 IPR025103 Protein of unknown function DUF4011 XDD1_1916 437975343eea43f4a84184244822b701 2033 SMART SM00220 143 359 2.2E-8 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 XDD1_1916 437975343eea43f4a84184244822b701 2033 Gene3D G3DSA:3.40.50.300 1748 1950 1.4E-28 T 15-10-2018 XDD1_1916 437975343eea43f4a84184244822b701 2033 Pfam PF00069 Protein kinase domain 165 355 5.5E-17 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 XDD1_1916 437975343eea43f4a84184244822b701 2033 SUPERFAMILY SSF56112 160 381 1.66E-30 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily XDD1_1916 437975343eea43f4a84184244822b701 2033 Gene3D G3DSA:3.40.50.300 921 1133 3.1E-16 T 15-10-2018 XDD1_1916 437975343eea43f4a84184244822b701 2033 Gene3D G3DSA:3.40.50.300 1509 1704 1.2E-12 T 15-10-2018 XDD1_1916 437975343eea43f4a84184244822b701 2033 SUPERFAMILY SSF52540 967 1965 4.59E-33 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1916 437975343eea43f4a84184244822b701 2033 Gene3D G3DSA:1.10.510.10 136 402 5.2E-28 T 15-10-2018 XDD1_2960 385ebc5a49568cebfe3e681df493e623 201 Pfam PF13023 HD domain 24 184 4.0E-50 T 15-10-2018 IPR006674 HD domain XDD1_2960 385ebc5a49568cebfe3e681df493e623 201 SUPERFAMILY SSF109604 14 191 4.32E-44 T 15-10-2018 XDD1_2960 385ebc5a49568cebfe3e681df493e623 201 Gene3D G3DSA:1.10.3210.10 11 201 1.8E-52 T 15-10-2018 XDD1_3517 6779e62d9cc326af1f5446557217f887 117 Pfam PF13466 STAS domain 32 107 6.7E-14 T 15-10-2018 IPR002645 STAS domain XDD1_3517 6779e62d9cc326af1f5446557217f887 117 Gene3D G3DSA:3.30.750.24 20 117 3.5E-9 T 15-10-2018 IPR036513 STAS domain superfamily XDD1_3517 6779e62d9cc326af1f5446557217f887 117 SUPERFAMILY SSF52091 20 111 3.34E-14 T 15-10-2018 IPR036513 STAS domain superfamily XDD1_3960 d599922150769208ef159ae7e7ca089c 308 SUPERFAMILY SSF54862 28 272 3.66E-71 T 15-10-2018 XDD1_3960 d599922150769208ef159ae7e7ca089c 308 Gene3D G3DSA:1.20.5.480 247 293 1.4E-25 T 15-10-2018 IPR038384 Formate dehydrogenase, C-terminal domain superfamily XDD1_3960 d599922150769208ef159ae7e7ca089c 308 Gene3D G3DSA:3.30.70.20 18 162 3.0E-102 T 15-10-2018 XDD1_3960 d599922150769208ef159ae7e7ca089c 308 Gene3D G3DSA:3.30.70.20 28 227 3.0E-102 T 15-10-2018 XDD1_3960 d599922150769208ef159ae7e7ca089c 308 Pfam PF13247 4Fe-4S dicluster domain 92 188 6.2E-25 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XDD1_3960 d599922150769208ef159ae7e7ca089c 308 PIRSF PIRSF036298 1 305 1.4E-163 T 15-10-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 XDD1_3960 d599922150769208ef159ae7e7ca089c 308 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XDD1_3960 d599922150769208ef159ae7e7ca089c 308 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 289 3.7E-22 T 15-10-2018 IPR015246 Formate dehydrogenase, transmembrane XDD1_3960 d599922150769208ef159ae7e7ca089c 308 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 290 7.8E-142 T 15-10-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 XDD1_1118 7783b7eea6d8ca568d1aacb4667f063d 179 Pfam PF02794 RTX toxin acyltransferase family 23 149 5.6E-38 T 15-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 XDD1_1118 7783b7eea6d8ca568d1aacb4667f063d 179 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 67 85 1.8E-8 T 15-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 XDD1_1118 7783b7eea6d8ca568d1aacb4667f063d 179 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 25 41 1.8E-8 T 15-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 XDD1_1118 7783b7eea6d8ca568d1aacb4667f063d 179 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 145 166 1.8E-8 T 15-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 XDD1_1728 af6aa60e0136d9af10d0882fa0f4a847 152 Pfam PF06173 Protein of unknown function (DUF986) 5 151 2.3E-59 T 15-10-2018 IPR009328 Protein of unknown function DUF986 XDD1_1728 af6aa60e0136d9af10d0882fa0f4a847 152 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 12 134 1.0E-35 T 15-10-2018 IPR009328 Protein of unknown function DUF986 XDD1_1728 af6aa60e0136d9af10d0882fa0f4a847 152 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 28.756 T 15-10-2018 IPR009328 Protein of unknown function DUF986 XDD1_1728 af6aa60e0136d9af10d0882fa0f4a847 152 PIRSF PIRSF020687 1 152 1.6E-60 T 15-10-2018 IPR009328 Protein of unknown function DUF986 XDD1_2655 12af225a015060ecbc884e654e2cdb58 228 Gene3D G3DSA:3.30.70.1070 145 223 4.8E-5 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XDD1_2655 12af225a015060ecbc884e654e2cdb58 228 Pfam PF05036 Sporulation related domain 151 223 4.2E-9 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 XDD1_2655 12af225a015060ecbc884e654e2cdb58 228 SUPERFAMILY SSF110997 150 223 5.62E-13 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XDD1_2655 12af225a015060ecbc884e654e2cdb58 228 Hamap MF_02022 Cell division protein DedD [dedD]. 14 228 23.083 T 15-10-2018 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 XDD1_1469 83265d18554e15fb55c307db97e58582 326 Pfam PF04055 Radical SAM superfamily 18 178 7.9E-28 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XDD1_1469 83265d18554e15fb55c307db97e58582 326 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 4 326 37.171 T 15-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 XDD1_1469 83265d18554e15fb55c307db97e58582 326 Gene3D G3DSA:3.20.20.70 1 326 2.3E-83 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_1469 83265d18554e15fb55c307db97e58582 326 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 326 8.5E-103 T 15-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 XDD1_1469 83265d18554e15fb55c307db97e58582 326 SUPERFAMILY SSF102114 4 280 8.11E-71 T 15-10-2018 XDD1_1469 83265d18554e15fb55c307db97e58582 326 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 15-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 XDD1_1469 83265d18554e15fb55c307db97e58582 326 Pfam PF13353 4Fe-4S single cluster domain 22 122 3.6E-8 T 15-10-2018 XDD1_1469 83265d18554e15fb55c307db97e58582 326 SMART SM00729 13 216 1.8E-4 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 XDD1_1469 83265d18554e15fb55c307db97e58582 326 Pfam PF06463 Molybdenum Cofactor Synthesis C 183 309 1.9E-38 T 15-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 XDD1_1914 fca78ac22d1b8c1b2e87ee3385c8affc 617 Pfam PF07724 AAA domain (Cdc48 subfamily) 333 504 9.6E-35 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_1914 fca78ac22d1b8c1b2e87ee3385c8affc 617 SMART SM00382 331 476 9.9E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1914 fca78ac22d1b8c1b2e87ee3385c8affc 617 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 442 456 7.2E-29 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_1914 fca78ac22d1b8c1b2e87ee3385c8affc 617 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 380 398 7.2E-29 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_1914 fca78ac22d1b8c1b2e87ee3385c8affc 617 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 409 427 7.2E-29 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_1914 fca78ac22d1b8c1b2e87ee3385c8affc 617 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 335 353 7.2E-29 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_1914 fca78ac22d1b8c1b2e87ee3385c8affc 617 Gene3D G3DSA:1.10.8.60 514 606 3.1E-5 T 15-10-2018 XDD1_1914 fca78ac22d1b8c1b2e87ee3385c8affc 617 Gene3D G3DSA:3.40.50.300 259 511 4.4E-67 T 15-10-2018 XDD1_1914 fca78ac22d1b8c1b2e87ee3385c8affc 617 SUPERFAMILY SSF52540 283 580 3.31E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1914 fca78ac22d1b8c1b2e87ee3385c8affc 617 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 517 590 6.1E-5 T 15-10-2018 IPR019489 Clp ATPase, C-terminal XDD1_3501 4964c53906c711b4f4520bf5f17d6d8e 242 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 10 225 1.4E-83 T 15-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_3501 4964c53906c711b4f4520bf5f17d6d8e 242 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 7 229 39.156 T 15-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_3501 4964c53906c711b4f4520bf5f17d6d8e 242 SUPERFAMILY SSF53955 54 230 5.34E-61 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily XDD1_3501 4964c53906c711b4f4520bf5f17d6d8e 242 Gene3D G3DSA:1.10.3810.10 47 237 2.8E-54 T 15-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_3501 4964c53906c711b4f4520bf5f17d6d8e 242 Pfam PF00912 Transglycosylase 56 224 7.6E-52 T 15-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XDD1_1687 c2237ac0df56b92d674888b3e5106595 382 SUPERFAMILY SSF56563 94 380 5.62E-61 T 15-10-2018 XDD1_1687 c2237ac0df56b92d674888b3e5106595 382 Gene3D G3DSA:3.30.2320.10 238 332 1.6E-13 T 15-10-2018 XDD1_1687 c2237ac0df56b92d674888b3e5106595 382 Gene3D G3DSA:3.30.2400.10 138 340 1.6E-13 T 15-10-2018 XDD1_1687 c2237ac0df56b92d674888b3e5106595 382 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 5 377 7.1E-92 T 15-10-2018 IPR024455 Phage capsid XDD1_1687 c2237ac0df56b92d674888b3e5106595 382 Pfam PF05065 Phage capsid family 102 377 9.3E-61 T 15-10-2018 IPR024455 Phage capsid XDD1_1971 b48b62a40b12e0f5c219967d98f35490 343 Gene3D G3DSA:1.10.3470.10 18 343 2.2E-80 T 15-10-2018 IPR037294 ABC transporter, BtuC-like XDD1_1971 b48b62a40b12e0f5c219967d98f35490 343 SUPERFAMILY SSF81345 13 340 1.27E-72 T 15-10-2018 IPR037294 ABC transporter, BtuC-like XDD1_1971 b48b62a40b12e0f5c219967d98f35490 343 Pfam PF01032 FecCD transport family 31 340 7.8E-81 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 XDD1_1534 43d84a0b08410a95da8f19958b4a5c1b 202 Gene3D G3DSA:1.20.144.10 94 188 7.9E-15 T 15-10-2018 XDD1_1534 43d84a0b08410a95da8f19958b4a5c1b 202 SMART SM00014 60 169 4.2E-13 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XDD1_1534 43d84a0b08410a95da8f19958b4a5c1b 202 SUPERFAMILY SSF48317 3 172 2.09E-33 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily XDD1_1534 43d84a0b08410a95da8f19958b4a5c1b 202 Pfam PF01569 PAP2 superfamily 67 168 3.2E-11 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XDD1_1358 079f69405566c98cb0855acd21510fcc 240 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 23 231 3.3E-56 T 15-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 XDD1_1358 079f69405566c98cb0855acd21510fcc 240 Pfam PF04973 Nicotinamide mononucleotide transporter 23 227 2.9E-52 T 15-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 XDD1_1254 729ae8eeae32b91bd81b9022297de555 344 Gene3D G3DSA:3.40.190.100 127 267 2.8E-136 T 15-10-2018 XDD1_1254 729ae8eeae32b91bd81b9022297de555 344 SUPERFAMILY SSF53850 38 341 4.22E-93 T 15-10-2018 XDD1_1254 729ae8eeae32b91bd81b9022297de555 344 Gene3D G3DSA:3.40.190.10 39 339 2.8E-136 T 15-10-2018 XDD1_1254 729ae8eeae32b91bd81b9022297de555 344 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 50 326 5.4E-55 T 15-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 XDD1_3576 7e6d2fc63ae59685195d67a30732831d 326 Gene3D G3DSA:3.30.70.3040 70 182 6.1E-6 T 15-10-2018 XDD1_3576 7e6d2fc63ae59685195d67a30732831d 326 Pfam PF02687 FtsX-like permease family 227 317 4.2E-6 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 XDD1_3576 7e6d2fc63ae59685195d67a30732831d 326 PIRSF PIRSF003097 26 322 4.2E-90 T 15-10-2018 IPR004513 Cell division protein FtsX GO:0016021 XDD1_2110 46417aeb18ec04ec81b056801ab28ac3 511 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 511 2.5E-290 T 15-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 XDD1_2110 46417aeb18ec04ec81b056801ab28ac3 511 SUPERFAMILY SSF51735 137 317 5.92E-36 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2110 46417aeb18ec04ec81b056801ab28ac3 511 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 1.7E-74 T 15-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain XDD1_2110 46417aeb18ec04ec81b056801ab28ac3 511 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.9E-51 T 15-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal XDD1_2110 46417aeb18ec04ec81b056801ab28ac3 511 Gene3D G3DSA:3.40.50.720 3 365 9.5E-163 T 15-10-2018 XDD1_2110 46417aeb18ec04ec81b056801ab28ac3 511 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 428 510 5.2E-35 T 15-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 XDD1_2110 46417aeb18ec04ec81b056801ab28ac3 511 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 15-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 XDD1_2110 46417aeb18ec04ec81b056801ab28ac3 511 SMART SM01002 146 311 1.1E-82 T 15-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain XDD1_2110 46417aeb18ec04ec81b056801ab28ac3 511 SUPERFAMILY SSF52283 1 168 1.96E-55 T 15-10-2018 XDD1_2110 46417aeb18ec04ec81b056801ab28ac3 511 PIRSF PIRSF000203 1 510 7.6E-278 T 15-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 XDD1_2110 46417aeb18ec04ec81b056801ab28ac3 511 Gene3D G3DSA:3.40.50.720 137 318 9.5E-163 T 15-10-2018 XDD1_2110 46417aeb18ec04ec81b056801ab28ac3 511 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 15-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 XDD1_2110 46417aeb18ec04ec81b056801ab28ac3 511 SMART SM01003 4 137 1.5E-74 T 15-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal XDD1_0198 5592bf19b6d4cf367b73c38535682f26 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 54 4.7E-19 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_0198 5592bf19b6d4cf367b73c38535682f26 341 SUPERFAMILY SSF53822 67 339 2.94E-90 T 15-10-2018 IPR028082 Periplasmic binding protein-like I XDD1_0198 5592bf19b6d4cf367b73c38535682f26 341 Gene3D G3DSA:3.40.50.2300 68 313 2.5E-80 T 15-10-2018 XDD1_0198 5592bf19b6d4cf367b73c38535682f26 341 Gene3D G3DSA:3.40.50.2300 167 296 2.5E-80 T 15-10-2018 XDD1_0198 5592bf19b6d4cf367b73c38535682f26 341 Gene3D G3DSA:1.10.260.40 2 66 1.3E-23 T 15-10-2018 XDD1_0198 5592bf19b6d4cf367b73c38535682f26 341 SMART SM00354 8 78 9.0E-25 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XDD1_0198 5592bf19b6d4cf367b73c38535682f26 341 SUPERFAMILY SSF47413 8 66 1.69E-15 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_0198 5592bf19b6d4cf367b73c38535682f26 341 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 67 314 2.2E-38 T 15-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain XDD1_1936 eb8123f1591884e6908e709e9431a69b 120 SUPERFAMILY SSF103473 5 108 9.29E-9 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1936 eb8123f1591884e6908e709e9431a69b 120 Gene3D G3DSA:1.20.1250.20 1 109 6.5E-7 T 15-10-2018 XDD1_0141 29ed914259110c1670b1e405ccd129a0 332 Gene3D G3DSA:3.90.550.10 1 262 2.4E-60 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_0141 29ed914259110c1670b1e405ccd129a0 332 SUPERFAMILY SSF53448 6 230 1.41E-55 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_0141 29ed914259110c1670b1e405ccd129a0 332 Pfam PF00535 Glycosyl transferase family 2 9 161 3.8E-34 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XDD1_0628 9685c9a41f46d66a9d721b41d19ebf3b 389 Pfam PF12500 TRSP domain C terminus to PRTase_2 274 366 3.9E-20 T 15-10-2018 IPR022537 TRSP domain XDD1_0628 9685c9a41f46d66a9d721b41d19ebf3b 389 SUPERFAMILY SSF53271 39 220 5.9E-14 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like XDD1_0628 9685c9a41f46d66a9d721b41d19ebf3b 389 Pfam PF15609 Phosphoribosyl transferase 43 228 1.1E-59 T 15-10-2018 XDD1_0628 9685c9a41f46d66a9d721b41d19ebf3b 389 PIRSF PIRSF020967 12 389 5.3E-178 T 15-10-2018 IPR011214 Uncharacterised conserved protein UCP020967 XDD1_0628 9685c9a41f46d66a9d721b41d19ebf3b 389 Gene3D G3DSA:3.40.50.2020 46 228 6.7E-11 T 15-10-2018 XDD1_3563 9b7fa5ed5bfad34f046ca87921ffe308 98 SUPERFAMILY SSF46689 4 98 3.58E-27 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3563 9b7fa5ed5bfad34f046ca87921ffe308 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.3E-34 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 XDD1_3563 9b7fa5ed5bfad34f046ca87921ffe308 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.3E-34 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 XDD1_3563 9b7fa5ed5bfad34f046ca87921ffe308 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.3E-34 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 XDD1_3563 9b7fa5ed5bfad34f046ca87921ffe308 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.3E-34 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 XDD1_3563 9b7fa5ed5bfad34f046ca87921ffe308 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XDD1_3563 9b7fa5ed5bfad34f046ca87921ffe308 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XDD1_3563 9b7fa5ed5bfad34f046ca87921ffe308 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.625 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 XDD1_3563 9b7fa5ed5bfad34f046ca87921ffe308 98 PIRSF PIRSF002097 1 98 8.1E-46 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 XDD1_3563 9b7fa5ed5bfad34f046ca87921ffe308 98 Gene3D G3DSA:1.10.10.60 1 98 1.7E-35 T 15-10-2018 XDD1_3563 9b7fa5ed5bfad34f046ca87921ffe308 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.8E-14 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XDD1_2988 3b878489932b50e60fa3ba3aee5ffd5f 207 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 37.783 T 15-10-2018 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 XDD1_2988 3b878489932b50e60fa3ba3aee5ffd5f 207 Pfam PF01810 LysE type translocator 14 201 7.5E-45 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 XDD1_2202 7e1224db42d381bb5ef2bbddd8b98870 202 Pfam PF00925 GTP cyclohydrolase II 9 174 3.3E-65 T 15-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XDD1_2202 7e1224db42d381bb5ef2bbddd8b98870 202 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 5 200 47.962 T 15-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XDD1_2202 7e1224db42d381bb5ef2bbddd8b98870 202 SUPERFAMILY SSF142695 7 177 4.32E-64 T 15-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XDD1_2202 7e1224db42d381bb5ef2bbddd8b98870 202 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 9 198 3.7E-91 T 15-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XDD1_2202 7e1224db42d381bb5ef2bbddd8b98870 202 Gene3D G3DSA:3.40.50.10990 5 178 1.1E-74 T 15-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XDD1_3906 346ee768a68b85273bf3c875289b2103 396 Gene3D G3DSA:2.40.37.30 8 387 6.7E-149 T 15-10-2018 XDD1_3906 346ee768a68b85273bf3c875289b2103 396 SUPERFAMILY SSF51419 34 265 1.87E-24 T 15-10-2018 IPR029066 PLP-binding barrel XDD1_3906 346ee768a68b85273bf3c875289b2103 396 Pfam PF01168 Alanine racemase, N-terminal domain 33 264 7.9E-18 T 15-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XDD1_3906 346ee768a68b85273bf3c875289b2103 396 Gene3D G3DSA:3.20.20.10 99 251 6.7E-149 T 15-10-2018 IPR029066 PLP-binding barrel XDD1_0864 6cba424344848e20b046dab0dcb4019c 294 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 18.083 T 15-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 XDD1_0864 6cba424344848e20b046dab0dcb4019c 294 Gene3D G3DSA:1.10.357.140 13 180 3.9E-17 T 15-10-2018 XDD1_0864 6cba424344848e20b046dab0dcb4019c 294 Pfam PF01040 UbiA prenyltransferase family 18 267 4.5E-57 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 XDD1_0864 6cba424344848e20b046dab0dcb4019c 294 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 282 2.2E-90 T 15-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 XDD1_0864 6cba424344848e20b046dab0dcb4019c 294 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 15-10-2018 IPR030470 UbiA prenyltransferase conserved site XDD1_3032 db3f9a8f2af0bb554a2f71f3887511f7 315 Gene3D G3DSA:1.10.10.10 15 102 1.1E-30 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3032 db3f9a8f2af0bb554a2f71f3887511f7 315 Pfam PF03466 LysR substrate binding domain 122 308 2.5E-21 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_3032 db3f9a8f2af0bb554a2f71f3887511f7 315 SUPERFAMILY SSF53850 105 309 3.39E-40 T 15-10-2018 XDD1_3032 db3f9a8f2af0bb554a2f71f3887511f7 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 82 8.0E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_3032 db3f9a8f2af0bb554a2f71f3887511f7 315 Gene3D G3DSA:3.40.190.10 105 307 5.4E-35 T 15-10-2018 XDD1_3032 db3f9a8f2af0bb554a2f71f3887511f7 315 SUPERFAMILY SSF46785 19 98 9.07E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3032 db3f9a8f2af0bb554a2f71f3887511f7 315 Gene3D G3DSA:3.40.190.10 186 283 5.4E-35 T 15-10-2018 XDD1_3032 db3f9a8f2af0bb554a2f71f3887511f7 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_3032 db3f9a8f2af0bb554a2f71f3887511f7 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 60 2.7E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_3032 db3f9a8f2af0bb554a2f71f3887511f7 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 60 71 2.7E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0190 3f39f2ac849484605aadd5d15047916f 507 Gene3D G3DSA:3.30.420.40 261 507 2.9E-96 T 15-10-2018 XDD1_0190 3f39f2ac849484605aadd5d15047916f 507 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 369 389 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 XDD1_0190 3f39f2ac849484605aadd5d15047916f 507 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 268 457 1.9E-62 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 XDD1_0190 3f39f2ac849484605aadd5d15047916f 507 Gene3D G3DSA:3.30.420.40 7 260 1.5E-113 T 15-10-2018 XDD1_0190 3f39f2ac849484605aadd5d15047916f 507 SUPERFAMILY SSF53067 10 262 4.58E-93 T 15-10-2018 XDD1_0190 3f39f2ac849484605aadd5d15047916f 507 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 11 259 1.6E-87 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 XDD1_0190 3f39f2ac849484605aadd5d15047916f 507 SUPERFAMILY SSF53067 262 503 1.24E-86 T 15-10-2018 XDD1_0190 3f39f2ac849484605aadd5d15047916f 507 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 10 503 1.4E-228 T 15-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 XDD1_0190 3f39f2ac849484605aadd5d15047916f 507 PIRSF PIRSF000538 9 507 2.9E-178 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 XDD1_0190 3f39f2ac849484605aadd5d15047916f 507 Hamap MF_00186 Glycerol kinase [glpK]. 9 504 59.528 T 15-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 XDD1_0190 3f39f2ac849484605aadd5d15047916f 507 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 142 154 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 XDD1_3511 663b083b849103f14a3e61b38a8a3c59 375 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 375 52.76 T 15-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 XDD1_3511 663b083b849103f14a3e61b38a8a3c59 375 SUPERFAMILY SSF52540 68 209 1.74E-13 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3511 663b083b849103f14a3e61b38a8a3c59 375 Pfam PF03969 AFG1-like ATPase 5 370 4.9E-147 T 15-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 XDD1_3511 663b083b849103f14a3e61b38a8a3c59 375 Gene3D G3DSA:3.40.50.300 63 215 2.9E-20 T 15-10-2018 XDD1_1205 e47cdc1e25540f9c606973379993e816 263 Pfam PF01578 Cytochrome C assembly protein 39 260 3.6E-39 T 15-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 XDD1_1965 a3a9be5f944876b262c143697a4c4435 470 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 12 408 5.5E-70 T 15-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 XDD1_1965 a3a9be5f944876b262c143697a4c4435 470 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 1.8E-5 T 15-10-2018 XDD1_1965 a3a9be5f944876b262c143697a4c4435 470 PRINTS PR01036 Tetracycline resistance protein TetB signature 301 325 1.8E-5 T 15-10-2018 XDD1_1965 a3a9be5f944876b262c143697a4c4435 470 PRINTS PR01036 Tetracycline resistance protein TetB signature 356 376 1.8E-5 T 15-10-2018 XDD1_1965 a3a9be5f944876b262c143697a4c4435 470 PRINTS PR01036 Tetracycline resistance protein TetB signature 75 97 1.8E-5 T 15-10-2018 XDD1_1965 a3a9be5f944876b262c143697a4c4435 470 SUPERFAMILY SSF103473 8 452 8.11E-61 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1965 a3a9be5f944876b262c143697a4c4435 470 Gene3D G3DSA:1.20.1720.10 12 222 3.4E-42 T 15-10-2018 XDD1_1965 a3a9be5f944876b262c143697a4c4435 470 Gene3D G3DSA:1.20.1250.20 259 461 5.7E-17 T 15-10-2018 XDD1_1965 a3a9be5f944876b262c143697a4c4435 470 Pfam PF07690 Major Facilitator Superfamily 16 407 2.2E-44 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0105 f09354703f95078a6cb2f75fc0eea6fd 477 SUPERFAMILY SSF55604 12 84 4.58E-20 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 XDD1_0105 f09354703f95078a6cb2f75fc0eea6fd 477 Pfam PF00367 phosphotransferase system, EIIB 14 45 1.2E-12 T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 XDD1_0105 f09354703f95078a6cb2f75fc0eea6fd 477 Gene3D G3DSA:3.30.1360.60 3 80 2.5E-22 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 XDD1_0105 f09354703f95078a6cb2f75fc0eea6fd 477 Pfam PF02378 Phosphotransferase system, EIIC 114 404 1.1E-32 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 XDD1_0105 f09354703f95078a6cb2f75fc0eea6fd 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 32 113 4.5E-16 T 15-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 XDD1_0105 f09354703f95078a6cb2f75fc0eea6fd 477 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 8 462 6.0E-212 T 15-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 XDD1_2497 795bcc2afca7ae97f1c4aac44229bfaa 332 SUPERFAMILY SSF48019 210 327 4.76E-35 T 15-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 XDD1_2497 795bcc2afca7ae97f1c4aac44229bfaa 332 Pfam PF13177 DNA polymerase III, delta subunit 9 161 1.3E-41 T 15-10-2018 XDD1_2497 795bcc2afca7ae97f1c4aac44229bfaa 332 Gene3D G3DSA:3.40.50.300 1 165 1.6E-48 T 15-10-2018 XDD1_2497 795bcc2afca7ae97f1c4aac44229bfaa 332 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 202 1.4E-55 T 15-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_2497 795bcc2afca7ae97f1c4aac44229bfaa 332 Gene3D G3DSA:1.20.272.10 209 331 1.9E-40 T 15-10-2018 XDD1_2497 795bcc2afca7ae97f1c4aac44229bfaa 332 SUPERFAMILY SSF52540 1 207 3.09E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2497 795bcc2afca7ae97f1c4aac44229bfaa 332 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 209 322 1.4E-40 T 15-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_1826 467acabf555608c9371359e37724a7d4 914 SUPERFAMILY SSF56731 121 368 3.66E-32 T 15-10-2018 XDD1_1826 467acabf555608c9371359e37724a7d4 914 Pfam PF01807 CHC2 zinc finger 6 90 5.1E-23 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XDD1_1826 467acabf555608c9371359e37724a7d4 914 SMART SM00400 36 90 3.6E-20 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XDD1_1826 467acabf555608c9371359e37724a7d4 914 Gene3D G3DSA:3.40.1360.10 244 356 4.8E-19 T 15-10-2018 XDD1_1826 467acabf555608c9371359e37724a7d4 914 SUPERFAMILY SSF57783 1 95 1.24E-27 T 15-10-2018 XDD1_1826 467acabf555608c9371359e37724a7d4 914 Gene3D G3DSA:3.90.980.10 115 231 1.9E-6 T 15-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily XDD1_1826 467acabf555608c9371359e37724a7d4 914 Gene3D G3DSA:3.90.580.10 1 98 9.9E-29 T 15-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 XDD1_1826 467acabf555608c9371359e37724a7d4 914 Pfam PF13155 Toprim-like 256 343 8.5E-17 T 15-10-2018 XDD1_1711 6b0d51959120790478f2dc863fea1489 262 Gene3D G3DSA:3.10.310.10 6 251 1.2E-86 T 15-10-2018 XDD1_1711 6b0d51959120790478f2dc863fea1489 262 PIRSF PIRSF016184 1 259 2.9E-51 T 15-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 XDD1_1711 6b0d51959120790478f2dc863fea1489 262 SUPERFAMILY SSF54506 3 259 8.12E-72 T 15-10-2018 XDD1_1711 6b0d51959120790478f2dc863fea1489 262 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 228 2.0E-33 T 15-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 XDD1_1711 6b0d51959120790478f2dc863fea1489 262 Gene3D G3DSA:3.10.310.10 114 247 1.2E-86 T 15-10-2018 XDD1_1711 6b0d51959120790478f2dc863fea1489 262 Pfam PF02567 Phenazine biosynthesis-like protein 9 252 2.2E-55 T 15-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 XDD1_2477 3b9bead06766f7d2e1aa52cb2a0ec6d3 208 Pfam PF04356 Protein of unknown function (DUF489) 7 198 5.9E-74 T 15-10-2018 IPR007451 High frequency lysogenization protein HflD XDD1_2477 3b9bead06766f7d2e1aa52cb2a0ec6d3 208 Gene3D G3DSA:1.10.3890.10 1 208 5.7E-76 T 15-10-2018 IPR035932 HflD-like superfamily XDD1_2477 3b9bead06766f7d2e1aa52cb2a0ec6d3 208 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 197 6.0E-84 T 15-10-2018 XDD1_2477 3b9bead06766f7d2e1aa52cb2a0ec6d3 208 SUPERFAMILY SSF101322 2 207 4.05E-78 T 15-10-2018 IPR035932 HflD-like superfamily XDD1_2477 3b9bead06766f7d2e1aa52cb2a0ec6d3 208 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 206 36.439 T 15-10-2018 IPR007451 High frequency lysogenization protein HflD XDD1_3177 1569122212df4388edeeb1c91ddf5443 461 Gene3D G3DSA:1.20.1740.10 7 461 6.8E-73 T 15-10-2018 XDD1_3177 1569122212df4388edeeb1c91ddf5443 461 Pfam PF00324 Amino acid permease 16 454 9.5E-110 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 XDD1_3177 1569122212df4388edeeb1c91ddf5443 461 PIRSF PIRSF006060 1 459 1.9E-77 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XDD1_3177 1569122212df4388edeeb1c91ddf5443 461 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 15-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 XDD1_1924 592998da736dc0199cce0e70448a35f0 428 Gene3D G3DSA:3.90.1150.10 6 415 9.5E-162 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_1924 592998da736dc0199cce0e70448a35f0 428 SUPERFAMILY SSF53383 22 419 3.82E-135 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_1924 592998da736dc0199cce0e70448a35f0 428 PIRSF PIRSF000521 122 422 9.0E-43 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_1924 592998da736dc0199cce0e70448a35f0 428 PIRSF PIRSF000521 7 128 8.9E-6 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_1924 592998da736dc0199cce0e70448a35f0 428 Pfam PF00202 Aminotransferase class-III 22 419 2.4E-131 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_1924 592998da736dc0199cce0e70448a35f0 428 Gene3D G3DSA:3.40.640.10 58 318 9.5E-162 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_1924 592998da736dc0199cce0e70448a35f0 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XDD1_1924 592998da736dc0199cce0e70448a35f0 428 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 8 420 2.3E-179 T 15-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 Gene3D G3DSA:3.90.930.1 865 1010 3.5E-5 T 15-10-2018 XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 Gene3D G3DSA:3.90.930.1 658 800 1.9E-13 T 15-10-2018 XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 Gene3D G3DSA:3.40.570.10 1431 1570 1.5E-15 T 15-10-2018 XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 Gene3D G3DSA:2.180.10.10 1141 1430 4.7E-36 T 15-10-2018 XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 Pfam PF05593 RHS Repeat 827 859 2.0E-5 T 15-10-2018 IPR031325 RHS repeat XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 Pfam PF05593 RHS Repeat 864 901 3.3E-5 T 15-10-2018 IPR031325 RHS repeat XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 Pfam PF05593 RHS Repeat 690 725 2.5E-12 T 15-10-2018 IPR031325 RHS repeat XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 Pfam PF05593 RHS Repeat 669 698 2.3E-6 T 15-10-2018 IPR031325 RHS repeat XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 Pfam PF05593 RHS Repeat 804 838 2.3E-5 T 15-10-2018 IPR031325 RHS repeat XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 564 598 1.1E-4 T 15-10-2018 IPR006530 YD repeat XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 607 646 9.9E-6 T 15-10-2018 IPR006530 YD repeat XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 669 710 8.3E-8 T 15-10-2018 IPR006530 YD repeat XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 843 883 0.0014 T 15-10-2018 IPR006530 YD repeat XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 753 793 5.7E-4 T 15-10-2018 IPR006530 YD repeat XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 711 752 5.1E-7 T 15-10-2018 IPR006530 YD repeat XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1211 1241 1.8E-6 T 15-10-2018 IPR006530 YD repeat XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 809 842 1.9E-4 T 15-10-2018 IPR006530 YD repeat XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 886 926 3.7E-6 T 15-10-2018 IPR006530 YD repeat XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1350 1431 4.0E-22 T 15-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 XDD1_3733 b6f5af1f2642021b781f68cb0d007025 1575 Pfam PF13930 DNA/RNA non-specific endonuclease 1440 1558 1.0E-17 T 15-10-2018 XDD1_3940 0df5fc44563bc8e586220586533070d8 513 Gene3D G3DSA:1.10.4160.10 62 500 3.4E-25 T 15-10-2018 IPR038271 Purine-cytosine permease superfamily XDD1_3940 0df5fc44563bc8e586220586533070d8 513 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 68 484 3.4E-42 T 15-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 XDD1_3940 0df5fc44563bc8e586220586533070d8 513 PIRSF PIRSF002744 29 513 6.5E-93 T 15-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 XDD1_1292 8702e228a6f6b16a34a162b73d6e7d87 348 Pfam PF02562 PhoH-like protein 123 326 4.7E-94 T 15-10-2018 IPR003714 PhoH-like protein GO:0005524 XDD1_1292 8702e228a6f6b16a34a162b73d6e7d87 348 Gene3D G3DSA:3.40.50.300 120 326 2.0E-74 T 15-10-2018 XDD1_1292 8702e228a6f6b16a34a162b73d6e7d87 348 SUPERFAMILY SSF52540 122 303 5.51E-40 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3778 c43582f68e3b37437829852b9ada3b8b 301 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 70 7.9E-14 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain XDD1_3778 c43582f68e3b37437829852b9ada3b8b 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 300 7.7E-29 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_3778 c43582f68e3b37437829852b9ada3b8b 301 SUPERFAMILY SSF161098 94 281 3.53E-28 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_3778 c43582f68e3b37437829852b9ada3b8b 301 Gene3D G3DSA:1.10.3720.10 89 296 3.1E-22 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_0608 6533cb745d2c5e54ead03b2b989fca92 445 Pfam PF02447 GntP family permease 5 440 1.4E-152 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 XDD1_0608 6533cb745d2c5e54ead03b2b989fca92 445 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 444 8.4E-159 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 XDD1_0608 6533cb745d2c5e54ead03b2b989fca92 445 PIRSF PIRSF002746 1 445 1.1E-148 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 XDD1_1349 f896d9c1f8a16e4ee7d2b9515f3295f6 95 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 15 92 9.0E-30 T 15-10-2018 IPR011846 Cyd operon protein YbgE XDD1_1349 f896d9c1f8a16e4ee7d2b9515f3295f6 95 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 4 94 2.4E-32 T 15-10-2018 IPR011846 Cyd operon protein YbgE XDD1_0118 3dc7469568b72fc2f6c8f3a592cc2433 199 SUPERFAMILY SSF48498 84 195 4.51E-6 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily XDD1_0118 3dc7469568b72fc2f6c8f3a592cc2433 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 62 1.3E-8 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XDD1_0118 3dc7469568b72fc2f6c8f3a592cc2433 199 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 15-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site XDD1_0118 3dc7469568b72fc2f6c8f3a592cc2433 199 SUPERFAMILY SSF46689 7 76 7.18E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0118 3dc7469568b72fc2f6c8f3a592cc2433 199 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 199 40.437 T 15-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 XDD1_0118 3dc7469568b72fc2f6c8f3a592cc2433 199 Gene3D G3DSA:1.10.357.10 10 199 2.9E-73 T 15-10-2018 XDD1_1241 17744b5f26faf64d689f93a9fd78334c 271 SMART SM00382 38 226 3.9E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1241 17744b5f26faf64d689f93a9fd78334c 271 Pfam PF00005 ABC transporter 30 177 4.7E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1241 17744b5f26faf64d689f93a9fd78334c 271 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_1241 17744b5f26faf64d689f93a9fd78334c 271 Gene3D G3DSA:3.40.50.300 7 266 1.4E-65 T 15-10-2018 XDD1_1241 17744b5f26faf64d689f93a9fd78334c 271 SUPERFAMILY SSF52540 14 238 1.04E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3548 7402f280b48a11fb01826c0dce019340 1292 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1289 0.0 T 15-10-2018 IPR011836 Conserved hypothetical protein CHP02099 XDD1_3548 7402f280b48a11fb01826c0dce019340 1292 Pfam PF13502 AsmA-like C-terminal region 1025 1278 1.5E-56 T 15-10-2018 IPR032712 AsmA-like, C-terminal XDD1_3548 7402f280b48a11fb01826c0dce019340 1292 Pfam PF13116 Protein of unknown function 507 784 5.1E-98 T 15-10-2018 IPR025263 Domain of unknown function DUF3971 XDD1_2034 d6dfb263bb61923090c7f63f71cb7b73 552 Gene3D G3DSA:2.60.200.20 2 117 1.5E-8 T 15-10-2018 XDD1_2034 d6dfb263bb61923090c7f63f71cb7b73 552 SUPERFAMILY SSF49879 15 103 3.06E-12 T 15-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 XDD1_2034 d6dfb263bb61923090c7f63f71cb7b73 552 Pfam PF00498 FHA domain 27 95 6.4E-5 T 15-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 XDD1_2034 d6dfb263bb61923090c7f63f71cb7b73 552 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 9 544 1.1E-39 T 15-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein XDD1_3314 6029230e3692a79591efd9df0d90b32b 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_3314 6029230e3692a79591efd9df0d90b32b 250 Gene3D G3DSA:3.30.2350.10 3 235 1.9E-61 T 15-10-2018 XDD1_3314 6029230e3692a79591efd9df0d90b32b 250 Pfam PF00849 RNA pseudouridylate synthase 10 170 1.2E-30 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_3314 6029230e3692a79591efd9df0d90b32b 250 SUPERFAMILY SSF55120 2 237 4.96E-64 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XDD1_2751 c08d6bef1b4a7cdfeaea20b8624a1f8a 405 Pfam PF04860 Phage portal protein 43 377 2.8E-88 T 15-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein XDD1_2751 c08d6bef1b4a7cdfeaea20b8624a1f8a 405 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 35 383 1.0E-74 T 15-10-2018 IPR006427 Phage portal protein, HK97 XDD1_3261 9ea4f2905757833937f62cdff9442193 185 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 167 24.343 T 15-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 XDD1_3261 9ea4f2905757833937f62cdff9442193 185 SUPERFAMILY SSF64288 13 167 4.72E-44 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily XDD1_3261 9ea4f2905757833937f62cdff9442193 185 Pfam PF04345 Chorismate lyase 11 167 4.2E-35 T 15-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 XDD1_3261 9ea4f2905757833937f62cdff9442193 185 Gene3D G3DSA:3.40.1410.10 4 167 1.5E-44 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily XDD1_3747 7671c05b61ab32382df8dfa39a52d743 727 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 119 626 2.9E-195 T 15-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset XDD1_3747 7671c05b61ab32382df8dfa39a52d743 727 SUPERFAMILY SSF69279 120 295 1.36E-57 T 15-10-2018 XDD1_3747 7671c05b61ab32382df8dfa39a52d743 727 Gene3D G3DSA:2.30.110.50 128 438 2.3E-96 T 15-10-2018 XDD1_3747 7671c05b61ab32382df8dfa39a52d743 727 Gene3D G3DSA:2.40.50.230 466 565 9.3E-42 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XDD1_3747 7671c05b61ab32382df8dfa39a52d743 727 Pfam PF05954 Phage late control gene D protein (GPD) 139 437 3.3E-88 T 15-10-2018 XDD1_3747 7671c05b61ab32382df8dfa39a52d743 727 SUPERFAMILY SSF69279 300 474 2.38E-43 T 15-10-2018 XDD1_3747 7671c05b61ab32382df8dfa39a52d743 727 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 132 612 6.0E-167 T 15-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein XDD1_3747 7671c05b61ab32382df8dfa39a52d743 727 SUPERFAMILY SSF69349 551 727 1.1E-32 T 15-10-2018 XDD1_3747 7671c05b61ab32382df8dfa39a52d743 727 Gene3D G3DSA:3.55.50.10 208 299 2.3E-96 T 15-10-2018 XDD1_3747 7671c05b61ab32382df8dfa39a52d743 727 Gene3D G3DSA:3.30.1920.30 331 394 2.3E-96 T 15-10-2018 XDD1_3747 7671c05b61ab32382df8dfa39a52d743 727 SUPERFAMILY SSF69255 473 560 3.4E-34 T 15-10-2018 XDD1_2237 de5217c75c423f2c01b0f8e499bb9955 198 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 15-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 XDD1_2237 de5217c75c423f2c01b0f8e499bb9955 198 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.268 T 15-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 XDD1_2237 de5217c75c423f2c01b0f8e499bb9955 198 SUPERFAMILY SSF57716 142 192 3.18E-16 T 15-10-2018 XDD1_2237 de5217c75c423f2c01b0f8e499bb9955 198 Gene3D G3DSA:3.40.50.300 1 141 2.6E-28 T 15-10-2018 XDD1_2237 de5217c75c423f2c01b0f8e499bb9955 198 Pfam PF00265 Thymidine kinase 2 186 3.8E-61 T 15-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 XDD1_2237 de5217c75c423f2c01b0f8e499bb9955 198 SUPERFAMILY SSF52540 1 141 3.82E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2237 de5217c75c423f2c01b0f8e499bb9955 198 PIRSF PIRSF035805 1 198 2.7E-60 T 15-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 XDD1_2237 de5217c75c423f2c01b0f8e499bb9955 198 Gene3D G3DSA:3.30.60.20 144 189 1.9E-8 T 15-10-2018 XDD1_2384 f9b73d81cf5379a4fad0d822263e4a51 350 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 2.0E-145 T 15-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_2384 f9b73d81cf5379a4fad0d822263e4a51 350 Gene3D G3DSA:3.20.20.140 6 348 1.0E-106 T 15-10-2018 XDD1_2384 f9b73d81cf5379a4fad0d822263e4a51 350 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 15-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_2384 f9b73d81cf5379a4fad0d822263e4a51 350 ProSitePatterns PS00482 Dihydroorotase signature 1. 15 23 - T 15-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_2384 f9b73d81cf5379a4fad0d822263e4a51 350 Pfam PF01979 Amidohydrolase family 15 314 4.6E-20 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 XDD1_2384 f9b73d81cf5379a4fad0d822263e4a51 350 PIRSF PIRSF001237 4 349 9.2E-139 T 15-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_2384 f9b73d81cf5379a4fad0d822263e4a51 350 SUPERFAMILY SSF51556 7 346 2.38E-145 T 15-10-2018 IPR032466 Metal-dependent hydrolase XDD1_2384 f9b73d81cf5379a4fad0d822263e4a51 350 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 45.985 T 15-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XDD1_3969 0af96ba74fa8f45020d028f3b7fe2ef4 977 Gene3D G3DSA:2.170.130.10 60 188 1.5E-39 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XDD1_3969 0af96ba74fa8f45020d028f3b7fe2ef4 977 Pfam PF00593 TonB dependent receptor 395 974 1.9E-28 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XDD1_3969 0af96ba74fa8f45020d028f3b7fe2ef4 977 SUPERFAMILY SSF56935 69 977 1.37E-70 T 15-10-2018 XDD1_3969 0af96ba74fa8f45020d028f3b7fe2ef4 977 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 172 8.4E-13 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain XDD1_3969 0af96ba74fa8f45020d028f3b7fe2ef4 977 Gene3D G3DSA:2.40.170.20 248 574 5.0E-51 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XDD1_3969 0af96ba74fa8f45020d028f3b7fe2ef4 977 Gene3D G3DSA:2.40.170.20 631 977 1.4E-59 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XDD1_1130 40eef2dc6cf049f64e11a1b751011b3e 229 Gene3D G3DSA:3.40.50.150 84 215 1.6E-12 T 15-10-2018 XDD1_1130 40eef2dc6cf049f64e11a1b751011b3e 229 SUPERFAMILY SSF53335 43 200 1.67E-17 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_1130 40eef2dc6cf049f64e11a1b751011b3e 229 Pfam PF02384 N-6 DNA Methylase 100 201 1.3E-4 T 15-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 XDD1_0928 9ce0791567d7b7e238e577dd28b6b79c 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_0928 9ce0791567d7b7e238e577dd28b6b79c 228 SUPERFAMILY SSF52540 6 226 4.38E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0928 9ce0791567d7b7e238e577dd28b6b79c 228 SMART SM00382 35 225 2.1E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0928 9ce0791567d7b7e238e577dd28b6b79c 228 Gene3D G3DSA:3.40.50.300 3 228 4.7E-65 T 15-10-2018 XDD1_0928 9ce0791567d7b7e238e577dd28b6b79c 228 Pfam PF00005 ABC transporter 26 174 1.1E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_0462 d9613bdffbd2465e3b57812ffb0a7540 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0462 d9613bdffbd2465e3b57812ffb0a7540 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.9E-39 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0462 d9613bdffbd2465e3b57812ffb0a7540 85 SUPERFAMILY SSF110324 2 79 2.62E-34 T 15-10-2018 XDD1_0462 d9613bdffbd2465e3b57812ffb0a7540 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 7.6E-44 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0462 d9613bdffbd2465e3b57812ffb0a7540 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 15-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0462 d9613bdffbd2465e3b57812ffb0a7540 85 Gene3D G3DSA:2.40.50.100 21 85 3.4E-31 T 15-10-2018 XDD1_0462 d9613bdffbd2465e3b57812ffb0a7540 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.364 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0462 d9613bdffbd2465e3b57812ffb0a7540 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.6E-39 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0462 d9613bdffbd2465e3b57812ffb0a7540 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.6E-39 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0462 d9613bdffbd2465e3b57812ffb0a7540 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.6E-39 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0191 93616cb4ae5c38cb3d5ab51e15ae652d 265 SUPERFAMILY SSF81338 11 259 9.03E-77 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 XDD1_0191 93616cb4ae5c38cb3d5ab51e15ae652d 265 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 253 3.9E-68 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XDD1_0191 93616cb4ae5c38cb3d5ab51e15ae652d 265 PRINTS PR00783 Major intrinsic protein family signature 50 74 5.1E-49 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XDD1_0191 93616cb4ae5c38cb3d5ab51e15ae652d 265 PRINTS PR00783 Major intrinsic protein family signature 153 171 5.1E-49 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XDD1_0191 93616cb4ae5c38cb3d5ab51e15ae652d 265 PRINTS PR00783 Major intrinsic protein family signature 236 256 5.1E-49 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XDD1_0191 93616cb4ae5c38cb3d5ab51e15ae652d 265 PRINTS PR00783 Major intrinsic protein family signature 11 30 5.1E-49 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XDD1_0191 93616cb4ae5c38cb3d5ab51e15ae652d 265 PRINTS PR00783 Major intrinsic protein family signature 87 106 5.1E-49 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XDD1_0191 93616cb4ae5c38cb3d5ab51e15ae652d 265 PRINTS PR00783 Major intrinsic protein family signature 186 208 5.1E-49 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XDD1_0191 93616cb4ae5c38cb3d5ab51e15ae652d 265 Gene3D G3DSA:1.20.1080.10 4 261 8.8E-100 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 XDD1_0191 93616cb4ae5c38cb3d5ab51e15ae652d 265 ProSitePatterns PS00221 MIP family signature. 68 76 - T 15-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 XDD1_0191 93616cb4ae5c38cb3d5ab51e15ae652d 265 Pfam PF00230 Major intrinsic protein 5 253 7.6E-65 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XDD1_0658 8abe24f9f5bed2e2b2755687abe84fee 478 Pfam PF00245 Alkaline phosphatase 71 437 3.2E-116 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XDD1_0658 8abe24f9f5bed2e2b2755687abe84fee 478 SMART SM00098 72 478 3.2E-175 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XDD1_0658 8abe24f9f5bed2e2b2755687abe84fee 478 Gene3D G3DSA:3.40.720.10 32 478 3.3E-144 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 XDD1_0658 8abe24f9f5bed2e2b2755687abe84fee 478 SUPERFAMILY SSF53649 45 477 3.05E-131 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 XDD1_0658 8abe24f9f5bed2e2b2755687abe84fee 478 ProSitePatterns PS00123 Alkaline phosphatase active site. 128 136 - T 15-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XDD1_0658 8abe24f9f5bed2e2b2755687abe84fee 478 PRINTS PR00113 Alkaline phosphatase signature 228 238 6.3E-48 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XDD1_0658 8abe24f9f5bed2e2b2755687abe84fee 478 PRINTS PR00113 Alkaline phosphatase signature 165 185 6.3E-48 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XDD1_0658 8abe24f9f5bed2e2b2755687abe84fee 478 PRINTS PR00113 Alkaline phosphatase signature 327 356 6.3E-48 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XDD1_0658 8abe24f9f5bed2e2b2755687abe84fee 478 PRINTS PR00113 Alkaline phosphatase signature 71 91 6.3E-48 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XDD1_0658 8abe24f9f5bed2e2b2755687abe84fee 478 PRINTS PR00113 Alkaline phosphatase signature 128 143 6.3E-48 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XDD1_3867 3af5cc87ac01ac5b4dab0cb932dc3915 771 Pfam PF07670 Nucleoside recognition 514 691 1.3E-36 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 XDD1_3867 3af5cc87ac01ac5b4dab0cb932dc3915 771 Pfam PF07670 Nucleoside recognition 355 445 7.8E-13 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 XDD1_3867 3af5cc87ac01ac5b4dab0cb932dc3915 771 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 11 689 1.3E-222 T 15-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 XDD1_3867 3af5cc87ac01ac5b4dab0cb932dc3915 771 Pfam PF02421 Ferrous iron transport protein B 6 164 6.9E-64 T 15-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 XDD1_3867 3af5cc87ac01ac5b4dab0cb932dc3915 771 SUPERFAMILY SSF52540 5 168 2.22E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3867 3af5cc87ac01ac5b4dab0cb932dc3915 771 Gene3D G3DSA:3.40.50.300 2 170 6.5E-47 T 15-10-2018 XDD1_3867 3af5cc87ac01ac5b4dab0cb932dc3915 771 Pfam PF07664 Ferrous iron transport protein B C terminus 457 509 4.0E-21 T 15-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 XDD1_2786 14ad19803a7ca4538258456a60bdfe5b 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 126 6.6E-70 T 15-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 XDD1_2786 14ad19803a7ca4538258456a60bdfe5b 128 Pfam PF01592 NifU-like N terminal domain 2 126 7.1E-57 T 15-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 XDD1_2786 14ad19803a7ca4538258456a60bdfe5b 128 SUPERFAMILY SSF82649 1 125 1.96E-47 T 15-10-2018 XDD1_2786 14ad19803a7ca4538258456a60bdfe5b 128 Gene3D G3DSA:3.90.1010.10 1 128 1.7E-58 T 15-10-2018 XDD1_3871 6a1bd0abbae2f826e3ba5c636894dbb3 411 Pfam PF07690 Major Facilitator Superfamily 39 347 2.5E-28 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_3871 6a1bd0abbae2f826e3ba5c636894dbb3 411 SUPERFAMILY SSF103473 33 404 5.89E-49 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_3871 6a1bd0abbae2f826e3ba5c636894dbb3 411 Gene3D G3DSA:1.20.1250.20 34 405 5.8E-40 T 15-10-2018 XDD1_2980 217b52a8302a38901771cfdaa8b35a5a 101 Gene3D G3DSA:1.10.20.30 1 47 2.0E-24 T 15-10-2018 XDD1_2980 217b52a8302a38901771cfdaa8b35a5a 101 Pfam PF05164 Cell division protein ZapA 6 90 3.3E-19 T 15-10-2018 IPR007838 Cell division protein ZapA-like XDD1_2980 217b52a8302a38901771cfdaa8b35a5a 101 SUPERFAMILY SSF102829 6 94 1.57E-24 T 15-10-2018 IPR036192 Cell division protein ZapA-like superfamily XDD1_2148 afbe91fa6149e61fe31a6723f2f06e39 198 Pfam PF03358 NADPH-dependent FMN reductase 1 145 3.5E-22 T 15-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 XDD1_2148 afbe91fa6149e61fe31a6723f2f06e39 198 Gene3D G3DSA:3.40.50.360 1 194 3.9E-31 T 15-10-2018 IPR029039 Flavoprotein-like superfamily XDD1_2148 afbe91fa6149e61fe31a6723f2f06e39 198 SUPERFAMILY SSF52218 1 160 9.39E-30 T 15-10-2018 IPR029039 Flavoprotein-like superfamily XDD1_1657 3b7109a2935bfc874a93070dad3d64ae 71 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 48 4.3E-5 T 15-10-2018 XDD1_1657 3b7109a2935bfc874a93070dad3d64ae 71 Gene3D G3DSA:3.40.50.1000 1 69 4.7E-15 T 15-10-2018 IPR023214 HAD superfamily XDD1_1657 3b7109a2935bfc874a93070dad3d64ae 71 SUPERFAMILY SSF56784 3 67 3.71E-10 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_1989 2cf1867746889a2727e66ee5147d906c 271 SUPERFAMILY SSF53474 9 269 7.36E-44 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1989 2cf1867746889a2727e66ee5147d906c 271 Pfam PF12697 Alpha/beta hydrolase family 28 261 3.1E-18 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_1989 2cf1867746889a2727e66ee5147d906c 271 Gene3D G3DSA:3.40.50.1820 3 270 3.7E-59 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1989 2cf1867746889a2727e66ee5147d906c 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 213 227 6.5E-7 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_1989 2cf1867746889a2727e66ee5147d906c 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 6.5E-7 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_1989 2cf1867746889a2727e66ee5147d906c 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 6.5E-7 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_3887 ef9c41fda81fce19c610634d907af64b 147 Gene3D G3DSA:3.30.300.20 3 133 5.3E-37 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta XDD1_3887 ef9c41fda81fce19c610634d907af64b 147 SUPERFAMILY SSF82784 2 143 1.06E-37 T 15-10-2018 IPR036102 OsmC/Ohr superfamily XDD1_3887 ef9c41fda81fce19c610634d907af64b 147 Pfam PF02566 OsmC-like protein 37 140 2.8E-22 T 15-10-2018 IPR003718 OsmC/Ohr family XDD1_3971 0c8c1955f85a000b74922c233bc0dffb 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.248 T 15-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 XDD1_3971 0c8c1955f85a000b74922c233bc0dffb 454 Gene3D G3DSA:1.20.120.430 122 454 3.3E-104 T 15-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 XDD1_3971 0c8c1955f85a000b74922c233bc0dffb 454 Gene3D G3DSA:3.40.50.300 217 382 3.3E-104 T 15-10-2018 XDD1_3971 0c8c1955f85a000b74922c233bc0dffb 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 1.4E-34 T 15-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 XDD1_3971 0c8c1955f85a000b74922c233bc0dffb 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 2.1E-100 T 15-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 XDD1_3971 0c8c1955f85a000b74922c233bc0dffb 454 SUPERFAMILY SSF52540 72 372 8.23E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3971 0c8c1955f85a000b74922c233bc0dffb 454 Gene3D G3DSA:3.30.1360.120 1 121 5.2E-38 T 15-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 XDD1_3971 0c8c1955f85a000b74922c233bc0dffb 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 370 3.8E-22 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XDD1_3971 0c8c1955f85a000b74922c233bc0dffb 454 Pfam PF01926 50S ribosome-binding GTPase 218 312 7.7E-25 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 XDD1_3971 0c8c1955f85a000b74922c233bc0dffb 454 SUPERFAMILY SSF116878 121 454 6.67E-52 T 15-10-2018 XDD1_3971 0c8c1955f85a000b74922c233bc0dffb 454 Pfam PF12631 MnmE helical domain 123 451 9.7E-62 T 15-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 XDD1_2535 00ed5467d474a0b7a19f6f763528bf25 195 SUPERFAMILY SSF54001 69 187 2.01E-41 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily XDD1_2535 00ed5467d474a0b7a19f6f763528bf25 195 Pfam PF00877 NlpC/P60 family 81 185 1.1E-31 T 15-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain XDD1_2535 00ed5467d474a0b7a19f6f763528bf25 195 Gene3D G3DSA:3.90.1720.10 64 194 1.9E-44 T 15-10-2018 XDD1_0932 21ac55252ec34942c7126ee9799e3235 383 SUPERFAMILY SSF103473 6 370 2.62E-26 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0932 21ac55252ec34942c7126ee9799e3235 383 Pfam PF07690 Major Facilitator Superfamily 6 339 1.8E-17 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0932 21ac55252ec34942c7126ee9799e3235 383 Gene3D G3DSA:1.20.1250.20 4 374 8.0E-24 T 15-10-2018 XDD1_2528 55001c453594939eeea627de89af2342 414 Gene3D G3DSA:1.20.1740.10 8 413 4.1E-8 T 15-10-2018 XDD1_2528 55001c453594939eeea627de89af2342 414 PIRSF PIRSF006060 312 413 9.1 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XDD1_2528 55001c453594939eeea627de89af2342 414 PIRSF PIRSF006060 4 305 3.0E-11 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XDD1_2528 55001c453594939eeea627de89af2342 414 PRINTS PR00166 Aromatic amino acid permease signature 19 42 4.0E-96 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 XDD1_2528 55001c453594939eeea627de89af2342 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 4.0E-96 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 XDD1_2528 55001c453594939eeea627de89af2342 414 PRINTS PR00166 Aromatic amino acid permease signature 46 65 4.0E-96 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 XDD1_2528 55001c453594939eeea627de89af2342 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 4.0E-96 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 XDD1_2528 55001c453594939eeea627de89af2342 414 PRINTS PR00166 Aromatic amino acid permease signature 91 111 4.0E-96 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 XDD1_2528 55001c453594939eeea627de89af2342 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 4.0E-96 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 XDD1_2528 55001c453594939eeea627de89af2342 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 4.0E-96 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 XDD1_2528 55001c453594939eeea627de89af2342 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 4.0E-96 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 XDD1_2528 55001c453594939eeea627de89af2342 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 4.0E-96 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 XDD1_2528 55001c453594939eeea627de89af2342 414 Pfam PF03222 Tryptophan/tyrosine permease family 10 402 2.3E-146 T 15-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 XDD1_2528 55001c453594939eeea627de89af2342 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 16 395 5.9E-150 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 XDD1_1863 c5447170f3a96061d0f67296fa63fa1e 145 Pfam PF01047 MarR family 29 87 1.1E-15 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_1863 c5447170f3a96061d0f67296fa63fa1e 145 SMART SM00347 22 123 4.9E-24 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_1863 c5447170f3a96061d0f67296fa63fa1e 145 SUPERFAMILY SSF46785 3 140 6.04E-31 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1863 c5447170f3a96061d0f67296fa63fa1e 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 9.4E-24 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_1863 c5447170f3a96061d0f67296fa63fa1e 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 9.4E-24 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_1863 c5447170f3a96061d0f67296fa63fa1e 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 9.4E-24 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_1863 c5447170f3a96061d0f67296fa63fa1e 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 9.4E-24 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_1863 c5447170f3a96061d0f67296fa63fa1e 145 Gene3D G3DSA:1.10.10.10 2 143 1.3E-35 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3635 8b3db6c3ef60352bdfef70dc04a8c5e4 399 Gene3D G3DSA:3.40.190.10 52 360 1.3E-140 T 15-10-2018 XDD1_3635 8b3db6c3ef60352bdfef70dc04a8c5e4 399 SUPERFAMILY SSF53850 32 398 2.23E-90 T 15-10-2018 XDD1_3635 8b3db6c3ef60352bdfef70dc04a8c5e4 399 Gene3D G3DSA:3.40.190.10 141 391 1.3E-140 T 15-10-2018 XDD1_3635 8b3db6c3ef60352bdfef70dc04a8c5e4 399 Pfam PF13416 Bacterial extracellular solute-binding protein 53 337 2.8E-41 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein XDD1_3635 8b3db6c3ef60352bdfef70dc04a8c5e4 399 PRINTS PR00181 Maltose binding protein signature 133 152 9.4E-83 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 XDD1_3635 8b3db6c3ef60352bdfef70dc04a8c5e4 399 PRINTS PR00181 Maltose binding protein signature 302 323 9.4E-83 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 XDD1_3635 8b3db6c3ef60352bdfef70dc04a8c5e4 399 PRINTS PR00181 Maltose binding protein signature 236 255 9.4E-83 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 XDD1_3635 8b3db6c3ef60352bdfef70dc04a8c5e4 399 PRINTS PR00181 Maltose binding protein signature 360 379 9.4E-83 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 XDD1_3635 8b3db6c3ef60352bdfef70dc04a8c5e4 399 PRINTS PR00181 Maltose binding protein signature 39 57 9.4E-83 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 XDD1_3635 8b3db6c3ef60352bdfef70dc04a8c5e4 399 PRINTS PR00181 Maltose binding protein signature 73 91 9.4E-83 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 XDD1_3635 8b3db6c3ef60352bdfef70dc04a8c5e4 399 PRINTS PR00181 Maltose binding protein signature 174 193 9.4E-83 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 XDD1_3635 8b3db6c3ef60352bdfef70dc04a8c5e4 399 PRINTS PR00181 Maltose binding protein signature 154 173 9.4E-83 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 XDD1_3574 f5bc85fd0bb19e1b5fecd30ab8884777 378 SUPERFAMILY SSF110738 2 376 8.37E-143 T 15-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 XDD1_3574 f5bc85fd0bb19e1b5fecd30ab8884777 378 PIRSF PIRSF006078 2 378 4.0E-138 T 15-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 XDD1_3574 f5bc85fd0bb19e1b5fecd30ab8884777 378 Gene3D G3DSA:3.40.50.10350 2 363 1.9E-143 T 15-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold XDD1_3574 f5bc85fd0bb19e1b5fecd30ab8884777 378 Pfam PF02595 Glycerate kinase family 4 374 3.7E-151 T 15-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 XDD1_3574 f5bc85fd0bb19e1b5fecd30ab8884777 378 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 3 376 7.9E-163 T 15-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 XDD1_3574 f5bc85fd0bb19e1b5fecd30ab8884777 378 Gene3D G3DSA:3.90.1510.10 43 277 1.9E-143 T 15-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 XDD1_2938 0117ce4d626b2436905dba6394a266b6 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 126 6.1E-15 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain XDD1_2938 0117ce4d626b2436905dba6394a266b6 133 Gene3D G3DSA:3.10.180.10 6 132 1.0E-34 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XDD1_2938 0117ce4d626b2436905dba6394a266b6 133 SUPERFAMILY SSF54593 8 130 1.48E-25 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XDD1_1175 f4138f3391604c25f63279d248bd7f42 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 1.6E-104 T 15-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 XDD1_1175 f4138f3391604c25f63279d248bd7f42 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 6.8E-60 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 XDD1_1175 f4138f3391604c25f63279d248bd7f42 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.585 T 15-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 XDD1_1175 f4138f3391604c25f63279d248bd7f42 198 PIRSF PIRSF006102 1 198 7.7E-66 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 XDD1_2302 d4815a261572812fc112869c2af8f442 137 SUPERFAMILY SSF101116 10 129 3.27E-41 T 15-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 XDD1_2302 d4815a261572812fc112869c2af8f442 137 Pfam PF02561 Flagellar protein FliS 10 125 1.1E-38 T 15-10-2018 IPR003713 Flagellar protein FliS GO:0044780 XDD1_2302 d4815a261572812fc112869c2af8f442 137 Gene3D G3DSA:1.20.120.340 1 128 3.5E-42 T 15-10-2018 XDD1_2302 d4815a261572812fc112869c2af8f442 137 PIRSF PIRSF039090 1 135 2.6E-44 T 15-10-2018 IPR003713 Flagellar protein FliS GO:0044780 XDD1_2302 d4815a261572812fc112869c2af8f442 137 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 125 8.4E-37 T 15-10-2018 IPR003713 Flagellar protein FliS GO:0044780 XDD1_3024 23549c0d20b486e0f0c99155c5f7ed8b 584 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 18 574 45.538 T 15-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XDD1_3024 23549c0d20b486e0f0c99155c5f7ed8b 584 SUPERFAMILY SSF56519 62 233 1.96E-43 T 15-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 XDD1_3024 23549c0d20b486e0f0c99155c5f7ed8b 584 Gene3D G3DSA:3.40.710.10 295 480 3.1E-105 T 15-10-2018 XDD1_3024 23549c0d20b486e0f0c99155c5f7ed8b 584 Pfam PF00905 Penicillin binding protein transpeptidase domain 259 558 1.4E-80 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XDD1_3024 23549c0d20b486e0f0c99155c5f7ed8b 584 SUPERFAMILY SSF56601 234 574 9.95E-83 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XDD1_3024 23549c0d20b486e0f0c99155c5f7ed8b 584 Gene3D G3DSA:3.90.1310.30 58 234 1.8E-42 T 15-10-2018 XDD1_3024 23549c0d20b486e0f0c99155c5f7ed8b 584 Gene3D G3DSA:3.30.450.330 236 554 3.1E-105 T 15-10-2018 XDD1_3024 23549c0d20b486e0f0c99155c5f7ed8b 584 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 219 3.8E-19 T 15-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 XDD1_0910 669c107e85d86c6919b7ba47d41be7ed 215 Pfam PF00406 Adenylate kinase 5 186 3.0E-60 T 15-10-2018 XDD1_0910 669c107e85d86c6919b7ba47d41be7ed 215 Hamap MF_00235 Adenylate kinase [adk]. 1 214 51.272 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XDD1_0910 669c107e85d86c6919b7ba47d41be7ed 215 SUPERFAMILY SSF52540 1 213 1.31E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0910 669c107e85d86c6919b7ba47d41be7ed 215 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.7E-75 T 15-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 XDD1_0910 669c107e85d86c6919b7ba47d41be7ed 215 PRINTS PR00094 Adenylate kinase signature 156 171 2.1E-35 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XDD1_0910 669c107e85d86c6919b7ba47d41be7ed 215 PRINTS PR00094 Adenylate kinase signature 32 46 2.1E-35 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XDD1_0910 669c107e85d86c6919b7ba47d41be7ed 215 PRINTS PR00094 Adenylate kinase signature 4 17 2.1E-35 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XDD1_0910 669c107e85d86c6919b7ba47d41be7ed 215 PRINTS PR00094 Adenylate kinase signature 81 97 2.1E-35 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XDD1_0910 669c107e85d86c6919b7ba47d41be7ed 215 PRINTS PR00094 Adenylate kinase signature 173 187 2.1E-35 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XDD1_0910 669c107e85d86c6919b7ba47d41be7ed 215 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 15-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XDD1_0910 669c107e85d86c6919b7ba47d41be7ed 215 Pfam PF05191 Adenylate kinase, active site lid 123 158 3.0E-14 T 15-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 XDD1_0910 669c107e85d86c6919b7ba47d41be7ed 215 Gene3D G3DSA:3.40.50.300 1 214 1.2E-79 T 15-10-2018 XDD1_0575 e8832673bdeadfa07287cfa0572c249d 1100 SUPERFAMILY SSF52540 15 1090 7.62E-12 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0575 e8832673bdeadfa07287cfa0572c249d 1100 Pfam PF13555 P-loop containing region of AAA domain 15 72 5.1E-19 T 15-10-2018 XDD1_0575 e8832673bdeadfa07287cfa0572c249d 1100 Pfam PF13558 Putative exonuclease SbcCD, C subunit 952 1040 1.9E-15 T 15-10-2018 XDD1_0575 e8832673bdeadfa07287cfa0572c249d 1100 SUPERFAMILY SSF52540 38 175 2.1E-6 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0999 249f4fd7cdeaa2100826fd5322d6e015 352 PRINTS PR00477 Phosphoglycerate kinase family signature 178 197 1.2E-10 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0999 249f4fd7cdeaa2100826fd5322d6e015 352 PRINTS PR00477 Phosphoglycerate kinase family signature 95 110 1.2E-10 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0999 249f4fd7cdeaa2100826fd5322d6e015 352 PRINTS PR00477 Phosphoglycerate kinase family signature 19 41 1.2E-10 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0999 249f4fd7cdeaa2100826fd5322d6e015 352 PRINTS PR00477 Phosphoglycerate kinase family signature 123 145 1.2E-10 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0999 249f4fd7cdeaa2100826fd5322d6e015 352 PRINTS PR00477 Phosphoglycerate kinase family signature 336 352 1.2E-10 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0999 249f4fd7cdeaa2100826fd5322d6e015 352 Pfam PF00162 Phosphoglycerate kinase 16 347 3.9E-35 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0999 249f4fd7cdeaa2100826fd5322d6e015 352 Gene3D G3DSA:3.40.50.1260 16 171 1.8E-40 T 15-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0999 249f4fd7cdeaa2100826fd5322d6e015 352 SUPERFAMILY SSF53748 16 348 2.62E-36 T 15-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0999 249f4fd7cdeaa2100826fd5322d6e015 352 Gene3D G3DSA:3.40.50.1260 174 348 1.8E-40 T 15-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XDD1_0555 ae971eda1b7b15a60a66c15482b361a1 192 SUPERFAMILY SSF56925 29 192 3.14E-22 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel XDD1_0555 ae971eda1b7b15a60a66c15482b361a1 192 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 104 192 7.6E-4 T 15-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 XDD1_0555 ae971eda1b7b15a60a66c15482b361a1 192 Pfam PF13505 Outer membrane protein beta-barrel domain 10 192 6.6E-18 T 15-10-2018 IPR027385 Outer membrane protein beta-barrel XDD1_0555 ae971eda1b7b15a60a66c15482b361a1 192 Gene3D G3DSA:2.40.160.20 24 192 1.7E-47 T 15-10-2018 XDD1_0555 ae971eda1b7b15a60a66c15482b361a1 192 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 45 57 6.3E-20 T 15-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 XDD1_0555 ae971eda1b7b15a60a66c15482b361a1 192 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 149 170 6.3E-20 T 15-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 XDD1_0555 ae971eda1b7b15a60a66c15482b361a1 192 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 91 114 6.3E-20 T 15-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 XDD1_p0001 a2254377f9e47a267ef398675ebb1c10 96 Pfam PF13693 Winged helix-turn-helix DNA-binding 5 78 5.5E-34 T 15-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain XDD1_p0001 a2254377f9e47a267ef398675ebb1c10 96 SUPERFAMILY SSF47413 3 69 8.44E-28 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_p0001 a2254377f9e47a267ef398675ebb1c10 96 Gene3D G3DSA:1.10.260.40 1 69 2.1E-31 T 15-10-2018 XDD1_1045 f83368284fa39624f7301f8b4fd5e17c 229 SUPERFAMILY SSF46894 142 213 7.48E-13 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XDD1_1045 f83368284fa39624f7301f8b4fd5e17c 229 SMART SM00421 151 208 4.8E-4 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_1045 f83368284fa39624f7301f8b4fd5e17c 229 Gene3D G3DSA:1.10.10.10 130 214 1.1E-9 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1045 f83368284fa39624f7301f8b4fd5e17c 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 204 2.1E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_2808 e1ee047350a6e84db3b8d36bce7be346 245 SUPERFAMILY SSF57863 86 167 1.67E-9 T 15-10-2018 IPR037278 ARFGAP/RecO-like zinc finger XDD1_2808 e1ee047350a6e84db3b8d36bce7be346 245 Pfam PF02565 Recombination protein O C terminal 85 226 1.1E-21 T 15-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 XDD1_2808 e1ee047350a6e84db3b8d36bce7be346 245 Gene3D G3DSA:2.40.50.140 1 78 4.0E-34 T 15-10-2018 XDD1_2808 e1ee047350a6e84db3b8d36bce7be346 245 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 23.184 T 15-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 XDD1_2808 e1ee047350a6e84db3b8d36bce7be346 245 SUPERFAMILY SSF50249 5 75 4.45E-15 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_2808 e1ee047350a6e84db3b8d36bce7be346 245 Pfam PF11967 Recombination protein O N terminal 5 76 5.1E-24 T 15-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal XDD1_2808 e1ee047350a6e84db3b8d36bce7be346 245 Gene3D G3DSA:1.20.1440.120 79 242 2.4E-54 T 15-10-2018 XDD1_2808 e1ee047350a6e84db3b8d36bce7be346 245 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 3.0E-38 T 15-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 XDD1_3191 bfbdea070e71dfd548a88262ff1ff074 490 Gene3D G3DSA:3.40.1670.10 337 454 7.3E-51 T 15-10-2018 XDD1_3191 bfbdea070e71dfd548a88262ff1ff074 490 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 73.988 T 15-10-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 XDD1_3191 bfbdea070e71dfd548a88262ff1ff074 490 SUPERFAMILY SSF143968 323 485 2.75E-66 T 15-10-2018 XDD1_3191 bfbdea070e71dfd548a88262ff1ff074 490 SUPERFAMILY SSF50475 3 322 5.89E-129 T 15-10-2018 XDD1_3191 bfbdea070e71dfd548a88262ff1ff074 490 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 431 3.9E-173 T 15-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 XDD1_3191 bfbdea070e71dfd548a88262ff1ff074 490 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 4.2E-186 T 15-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 XDD1_3191 bfbdea070e71dfd548a88262ff1ff074 490 Gene3D G3DSA:1.20.5.570 455 490 8.6E-17 T 15-10-2018 XDD1_3836 ddb824f0de1af48be2394dea58e6f9e6 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 8 107 1.4E-20 T 15-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 XDD1_3836 ddb824f0de1af48be2394dea58e6f9e6 116 Gene3D G3DSA:2.30.30.110 1 115 8.7E-33 T 15-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor XDD1_3836 ddb824f0de1af48be2394dea58e6f9e6 116 SUPERFAMILY SSF50118 2 109 2.83E-29 T 15-10-2018 XDD1_3006 58b19429561ff23899ddcf71849aabc5 207 Pfam PF01121 Dephospho-CoA kinase 3 179 8.8E-73 T 15-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 XDD1_3006 58b19429561ff23899ddcf71849aabc5 207 SUPERFAMILY SSF52540 1 197 7.01E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3006 58b19429561ff23899ddcf71849aabc5 207 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 27.653 T 15-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 XDD1_3006 58b19429561ff23899ddcf71849aabc5 207 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 178 3.4E-61 T 15-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 XDD1_3006 58b19429561ff23899ddcf71849aabc5 207 Gene3D G3DSA:3.40.50.300 1 207 7.0E-68 T 15-10-2018 XDD1_1601 fb47698f77ba3fa24b1d0d031a892b54 422 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 4 408 3.3E-156 T 15-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type XDD1_1601 fb47698f77ba3fa24b1d0d031a892b54 422 Pfam PF04403 Paraquat-inducible protein A 254 410 7.0E-54 T 15-10-2018 IPR007498 Intermembrane transport protein PqiA-like XDD1_1601 fb47698f77ba3fa24b1d0d031a892b54 422 Pfam PF04403 Paraquat-inducible protein A 51 201 2.2E-38 T 15-10-2018 IPR007498 Intermembrane transport protein PqiA-like XDD1_2586 d1aeca420b0eb0c355a58a974848b3ed 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 4.4E-21 T 15-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like XDD1_2586 d1aeca420b0eb0c355a58a974848b3ed 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 18.142 T 15-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 XDD1_3434 7a87ff51e26182d18e94f9eeb3063f6a 112 Gene3D G3DSA:3.30.1380.10 1 106 1.2E-11 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 XDD1_3434 7a87ff51e26182d18e94f9eeb3063f6a 112 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 47 106 2.0E-9 T 15-10-2018 IPR039561 Peptidase M15C GO:0008233 XDD1_3434 7a87ff51e26182d18e94f9eeb3063f6a 112 SUPERFAMILY SSF55166 10 106 3.85E-14 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 XDD1_2846 7a87ff51e26182d18e94f9eeb3063f6a 112 Gene3D G3DSA:3.30.1380.10 1 106 1.2E-11 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 XDD1_2846 7a87ff51e26182d18e94f9eeb3063f6a 112 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 47 106 2.0E-9 T 15-10-2018 IPR039561 Peptidase M15C GO:0008233 XDD1_2846 7a87ff51e26182d18e94f9eeb3063f6a 112 SUPERFAMILY SSF55166 10 106 3.85E-14 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 XDD1_2536 d1f640d56b1642154ecd034b6866b2c2 114 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 114 2.0E-40 T 15-10-2018 IPR020489 Uncharacterised protein family YejG XDD1_2536 d1f640d56b1642154ecd034b6866b2c2 114 Pfam PF13989 YejG-like protein 4 108 6.2E-47 T 15-10-2018 IPR020489 Uncharacterised protein family YejG XDD1_0629 9829caa2856cfd54bf724e6ecdfa9200 263 Gene3D G3DSA:3.40.50.1000 62 239 2.4E-7 T 15-10-2018 IPR023214 HAD superfamily XDD1_0629 9829caa2856cfd54bf724e6ecdfa9200 263 Gene3D G3DSA:3.90.1070.10 108 197 2.4E-7 T 15-10-2018 XDD1_0629 9829caa2856cfd54bf724e6ecdfa9200 263 PIRSF PIRSF030802 1 260 3.4E-103 T 15-10-2018 IPR024197 Uncharacterised conserved protein UCP030802 XDD1_0629 9829caa2856cfd54bf724e6ecdfa9200 263 SUPERFAMILY SSF56784 5 241 1.4E-16 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_1648 8a133a0db5031f342973c98268885364 553 Pfam PF03354 Phage Terminase 71 531 1.8E-89 T 15-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type XDD1_1648 8a133a0db5031f342973c98268885364 553 Gene3D G3DSA:3.40.50.300 24 251 1.7E-23 T 15-10-2018 XDD1_1112 892a392ad7bc624ca5908ee3f0c5419f 1477 Gene3D G3DSA:2.180.10.10 990 1326 1.7E-30 T 15-10-2018 XDD1_1112 892a392ad7bc624ca5908ee3f0c5419f 1477 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 1337 1436 1.8E-19 T 15-10-2018 IPR032871 AHH domain-containing protein XDD1_1112 892a392ad7bc624ca5908ee3f0c5419f 1477 Gene3D G3DSA:2.60.200.60 108 189 1.3E-23 T 15-10-2018 XDD1_1112 892a392ad7bc624ca5908ee3f0c5419f 1477 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1261 1326 5.0E-21 T 15-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 XDD1_1112 892a392ad7bc624ca5908ee3f0c5419f 1477 Pfam PF05593 RHS Repeat 786 819 3.3E-5 T 15-10-2018 IPR031325 RHS repeat XDD1_1112 892a392ad7bc624ca5908ee3f0c5419f 1477 Pfam PF05593 RHS Repeat 1123 1152 6.7E-5 T 15-10-2018 IPR031325 RHS repeat XDD1_1112 892a392ad7bc624ca5908ee3f0c5419f 1477 Pfam PF05593 RHS Repeat 829 866 9.1E-11 T 15-10-2018 IPR031325 RHS repeat XDD1_1112 892a392ad7bc624ca5908ee3f0c5419f 1477 Pfam PF05593 RHS Repeat 600 634 5.5E-7 T 15-10-2018 IPR031325 RHS repeat XDD1_1112 892a392ad7bc624ca5908ee3f0c5419f 1477 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 829 868 2.5E-9 T 15-10-2018 IPR006530 YD repeat XDD1_1112 892a392ad7bc624ca5908ee3f0c5419f 1477 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1123 1160 2.6E-6 T 15-10-2018 IPR006530 YD repeat XDD1_1112 892a392ad7bc624ca5908ee3f0c5419f 1477 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 792 827 5.8E-6 T 15-10-2018 IPR006530 YD repeat XDD1_1112 892a392ad7bc624ca5908ee3f0c5419f 1477 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 870 908 0.0023 T 15-10-2018 IPR006530 YD repeat XDD1_1112 892a392ad7bc624ca5908ee3f0c5419f 1477 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 601 635 8.0E-7 T 15-10-2018 IPR006530 YD repeat XDD1_1112 892a392ad7bc624ca5908ee3f0c5419f 1477 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 554 594 5.6E-8 T 15-10-2018 IPR006530 YD repeat XDD1_1112 892a392ad7bc624ca5908ee3f0c5419f 1477 Pfam PF05488 PAAR motif 117 179 2.2E-16 T 15-10-2018 IPR008727 PAAR motif XDD1_1112 892a392ad7bc624ca5908ee3f0c5419f 1477 SUPERFAMILY SSF69304 670 884 2.35E-7 T 15-10-2018 XDD1_1112 892a392ad7bc624ca5908ee3f0c5419f 1477 Gene3D G3DSA:3.90.930.1 775 930 1.9E-11 T 15-10-2018 XDD1_1112 892a392ad7bc624ca5908ee3f0c5419f 1477 Gene3D G3DSA:3.90.930.1 513 667 1.4E-12 T 15-10-2018 XDD1_0859 c475bb915d650e998b62de3f101231fc 85 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 15 70 1.6E-23 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 XDD1_0859 c475bb915d650e998b62de3f101231fc 85 SUPERFAMILY SSF116842 14 75 4.32E-20 T 15-10-2018 XDD1_0859 c475bb915d650e998b62de3f101231fc 85 Pfam PF02609 Exonuclease VII small subunit 16 67 1.5E-20 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 XDD1_0859 c475bb915d650e998b62de3f101231fc 85 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 15 57 1.0E-14 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 XDD1_0859 c475bb915d650e998b62de3f101231fc 85 Gene3D G3DSA:1.10.287.1040 9 85 6.8E-25 T 15-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 XDD1_0859 c475bb915d650e998b62de3f101231fc 85 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 15 75 16.217 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 XDD1_0859 c475bb915d650e998b62de3f101231fc 85 PIRSF PIRSF006488 4 85 2.0E-23 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 XDD1_2943 c050b68df53a25c77eddb6cea6fce90b 92 Pfam PF05947 Type VI secretion system, TssF 7 87 4.0E-25 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like XDD1_2623 2c75798a5782b50057a1de10846512eb 160 SUPERFAMILY SSF53254 1 143 5.65E-19 T 15-10-2018 IPR029033 Histidine phosphatase superfamily XDD1_2623 2c75798a5782b50057a1de10846512eb 160 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 153 8.3E-50 T 15-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 XDD1_2623 2c75798a5782b50057a1de10846512eb 160 Gene3D G3DSA:3.40.50.1240 1 159 6.4E-38 T 15-10-2018 IPR029033 Histidine phosphatase superfamily XDD1_2623 2c75798a5782b50057a1de10846512eb 160 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 70 1.5E-5 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XDD1_2626 b281bf9ef25ec1772cc29b8d01cacca7 319 SUPERFAMILY SSF52768 11 317 8.1E-76 T 15-10-2018 IPR023696 Ureohydrolase domain superfamily XDD1_2626 b281bf9ef25ec1772cc29b8d01cacca7 319 Hamap MF_00737 Formimidoylglutamase [hutG]. 7 315 40.643 T 15-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 XDD1_2626 b281bf9ef25ec1772cc29b8d01cacca7 319 PIRSF PIRSF036979 21 319 1.7E-28 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 XDD1_2626 b281bf9ef25ec1772cc29b8d01cacca7 319 TIGRFAM TIGR01227 hutG: formimidoylglutamase 12 314 4.7E-88 T 15-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 XDD1_2626 b281bf9ef25ec1772cc29b8d01cacca7 319 Pfam PF00491 Arginase family 45 313 1.3E-52 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 XDD1_2626 b281bf9ef25ec1772cc29b8d01cacca7 319 Gene3D G3DSA:3.40.800.10 5 319 2.7E-98 T 15-10-2018 XDD1_1418 41e7b809172720ef07f3310603d9f032 1692 Pfam PF05593 RHS Repeat 794 831 7.2E-7 T 15-10-2018 IPR031325 RHS repeat XDD1_1418 41e7b809172720ef07f3310603d9f032 1692 Gene3D G3DSA:2.180.10.10 1102 1372 4.2E-24 T 15-10-2018 XDD1_1418 41e7b809172720ef07f3310603d9f032 1692 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 794 829 5.8E-7 T 15-10-2018 IPR006530 YD repeat XDD1_1418 41e7b809172720ef07f3310603d9f032 1692 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1294 1373 4.0E-20 T 15-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 XDD1_0012 83e22ed8db9cbe9afe574f197ea970a8 734 SUPERFAMILY SSF117892 63 211 1.7E-10 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily XDD1_0843 cccf64dc6677a1adc1ee80092afeb77a 221 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 207 39.662 T 15-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 XDD1_0843 cccf64dc6677a1adc1ee80092afeb77a 221 Gene3D G3DSA:3.40.630.20 1 221 1.5E-80 T 15-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 XDD1_0843 cccf64dc6677a1adc1ee80092afeb77a 221 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 15-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 XDD1_0843 cccf64dc6677a1adc1ee80092afeb77a 221 SUPERFAMILY SSF53182 1 218 9.03E-70 T 15-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 XDD1_0843 cccf64dc6677a1adc1ee80092afeb77a 221 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 15-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 XDD1_0843 cccf64dc6677a1adc1ee80092afeb77a 221 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 2.2E-39 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 XDD1_0843 cccf64dc6677a1adc1ee80092afeb77a 221 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 2.2E-39 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 XDD1_0843 cccf64dc6677a1adc1ee80092afeb77a 221 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 2.2E-39 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 XDD1_0843 cccf64dc6677a1adc1ee80092afeb77a 221 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 2.2E-39 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 XDD1_0843 cccf64dc6677a1adc1ee80092afeb77a 221 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 220 2.9E-81 T 15-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 XDD1_0843 cccf64dc6677a1adc1ee80092afeb77a 221 Pfam PF01470 Pyroglutamyl peptidase 3 208 1.4E-77 T 15-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 XDD1_0843 cccf64dc6677a1adc1ee80092afeb77a 221 PIRSF PIRSF015592 1 219 1.1E-81 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 XDD1_0475 63f744077e31544e523fa7e007b41a66 112 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 1.7E-25 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XDD1_0475 63f744077e31544e523fa7e007b41a66 112 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.3E-38 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XDD1_0475 63f744077e31544e523fa7e007b41a66 112 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.3E-38 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XDD1_0475 63f744077e31544e523fa7e007b41a66 112 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.3E-38 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XDD1_0475 63f744077e31544e523fa7e007b41a66 112 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.3E-38 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XDD1_0475 63f744077e31544e523fa7e007b41a66 112 Pfam PF03840 Preprotein translocase SecG subunit 5 72 3.3E-21 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XDD1_2617 c9b17a958af074dd09103c0c46f86034 78 Gene3D G3DSA:3.30.160.390 1 78 4.4E-27 T 15-10-2018 IPR038488 Integrase, DNA-binding domain superfamily XDD1_2617 c9b17a958af074dd09103c0c46f86034 78 Pfam PF13356 Arm DNA-binding domain 2 77 9.0E-14 T 15-10-2018 IPR025166 Integrase, DNA-binding domain XDD1_2555 645b0f3ce2d5e86244951930f0920c84 257 Gene3D G3DSA:1.10.101.10 173 253 7.8E-29 T 15-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 XDD1_2555 645b0f3ce2d5e86244951930f0920c84 257 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 18 159 6.2E-24 T 15-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XDD1_2555 645b0f3ce2d5e86244951930f0920c84 257 SUPERFAMILY SSF55846 10 174 1.38E-44 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XDD1_2555 645b0f3ce2d5e86244951930f0920c84 257 SMART SM00644 7 158 5.0E-31 T 15-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XDD1_2555 645b0f3ce2d5e86244951930f0920c84 257 Gene3D G3DSA:3.40.80.10 17 172 2.2E-49 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XDD1_2555 645b0f3ce2d5e86244951930f0920c84 257 SUPERFAMILY SSF47090 174 253 5.76E-22 T 15-10-2018 IPR036365 PGBD-like superfamily XDD1_0301 b7d74eda4b5fa88b33dad586ec59aae3 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.855 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0301 b7d74eda4b5fa88b33dad586ec59aae3 38 Pfam PF00444 Ribosomal protein L36 1 38 2.8E-20 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0301 b7d74eda4b5fa88b33dad586ec59aae3 38 SUPERFAMILY SSF57840 1 38 7.59E-17 T 15-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0301 b7d74eda4b5fa88b33dad586ec59aae3 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0301 b7d74eda4b5fa88b33dad586ec59aae3 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 5.1E-22 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0301 b7d74eda4b5fa88b33dad586ec59aae3 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 2.0E-9 T 15-10-2018 XDD1_2172 19c5ba286d3429d29e4cbefa9c163200 100 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 3 83 4.0E-17 T 15-10-2018 IPR010595 Protein of unknown function DUF1161 XDD1_2172 19c5ba286d3429d29e4cbefa9c163200 100 Pfam PF06649 Protein of unknown function (DUF1161) 27 83 1.7E-21 T 15-10-2018 IPR010595 Protein of unknown function DUF1161 XDD1_1503 546a87f6216f7a2ee65cef6a6224e206 504 Pfam PF07916 TraG-like protein, N-terminal region 8 483 2.6E-98 T 15-10-2018 IPR012931 TraG-like, N-terminal XDD1_1812 2e09afca3bfcb4c3482aa0a6bbde8945 357 SUPERFAMILY SSF144064 5 347 1.57E-127 T 15-10-2018 XDD1_1812 2e09afca3bfcb4c3482aa0a6bbde8945 357 Gene3D G3DSA:3.40.1570.10 13 288 1.7E-125 T 15-10-2018 XDD1_1812 2e09afca3bfcb4c3482aa0a6bbde8945 357 Pfam PF05171 Haemin-degrading HemS.ChuX domain 208 345 2.0E-38 T 15-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 XDD1_1812 2e09afca3bfcb4c3482aa0a6bbde8945 357 Pfam PF05171 Haemin-degrading HemS.ChuX domain 29 157 1.5E-40 T 15-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 XDD1_1812 2e09afca3bfcb4c3482aa0a6bbde8945 357 Gene3D G3DSA:3.40.1570.10 82 339 1.7E-125 T 15-10-2018 XDD1_2315 c9800182aefd05b755e4ba21e62cc1f9 480 Gene3D G3DSA:3.30.750.140 321 435 1.1E-35 T 15-10-2018 IPR038610 FliK-like, C-terminal domain superfamily XDD1_2315 c9800182aefd05b755e4ba21e62cc1f9 480 Pfam PF02120 Flagellar hook-length control protein FliK 345 424 6.3E-21 T 15-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal XDD1_3853 b94464b0164079caca72fc6bf1c06d1b 268 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_3853 b94464b0164079caca72fc6bf1c06d1b 268 Gene3D G3DSA:3.40.50.300 20 266 1.5E-66 T 15-10-2018 XDD1_3853 b94464b0164079caca72fc6bf1c06d1b 268 Pfam PF00005 ABC transporter 37 192 2.0E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_3853 b94464b0164079caca72fc6bf1c06d1b 268 SUPERFAMILY SSF52540 22 255 1.49E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3853 b94464b0164079caca72fc6bf1c06d1b 268 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 22 268 1.5E-119 T 15-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 XDD1_3853 b94464b0164079caca72fc6bf1c06d1b 268 SMART SM00382 46 240 2.5E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_2597 9327cbb7d28025facf3e8e4e7e6c3f5c 404 SUPERFAMILY SSF53383 7 402 7.93E-95 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_2597 9327cbb7d28025facf3e8e4e7e6c3f5c 404 Pfam PF00155 Aminotransferase class I and II 35 389 2.5E-47 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XDD1_2597 9327cbb7d28025facf3e8e4e7e6c3f5c 404 Gene3D G3DSA:3.90.1150.10 22 398 1.3E-147 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_2597 9327cbb7d28025facf3e8e4e7e6c3f5c 404 Gene3D G3DSA:3.40.640.10 53 294 1.3E-147 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_0764 755bfa5f3da814fc1e1f822984e4c1b9 288 SUPERFAMILY SSF56300 2 254 2.35E-26 T 15-10-2018 XDD1_0764 755bfa5f3da814fc1e1f822984e4c1b9 288 Gene3D G3DSA:3.60.21.10 2 257 3.0E-12 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like XDD1_0764 755bfa5f3da814fc1e1f822984e4c1b9 288 Pfam PF00149 Calcineurin-like phosphoesterase 3 235 4.6E-17 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 XDD1_0089 ca319caedb2fa75b4a3c7b1a754e2857 313 Gene3D G3DSA:1.10.10.10 10 97 3.4E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0089 ca319caedb2fa75b4a3c7b1a754e2857 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 52 1.9E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0089 ca319caedb2fa75b4a3c7b1a754e2857 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 63 1.9E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0089 ca319caedb2fa75b4a3c7b1a754e2857 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 42 1.9E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0089 ca319caedb2fa75b4a3c7b1a754e2857 313 Gene3D G3DSA:3.40.190.10 174 281 8.6E-29 T 15-10-2018 XDD1_0089 ca319caedb2fa75b4a3c7b1a754e2857 313 Gene3D G3DSA:3.40.190.10 102 293 8.6E-29 T 15-10-2018 XDD1_0089 ca319caedb2fa75b4a3c7b1a754e2857 313 SUPERFAMILY SSF46785 15 97 7.55E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_0089 ca319caedb2fa75b4a3c7b1a754e2857 313 Pfam PF03466 LysR substrate binding domain 100 293 8.0E-18 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_0089 ca319caedb2fa75b4a3c7b1a754e2857 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 74 4.7E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_0089 ca319caedb2fa75b4a3c7b1a754e2857 313 SUPERFAMILY SSF53850 101 293 1.18E-19 T 15-10-2018 XDD1_3310 a0f3854e546ccbbcada4bf814de946b0 144 Pfam PF01047 MarR family 57 108 1.6E-5 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XDD1_3310 a0f3854e546ccbbcada4bf814de946b0 144 Gene3D G3DSA:1.10.10.10 41 120 8.8E-6 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3310 a0f3854e546ccbbcada4bf814de946b0 144 SUPERFAMILY SSF46785 41 112 5.62E-8 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_0614 fbd765c0f7714c013967bb54069216bf 378 Gene3D G3DSA:3.40.50.1110 150 366 3.0E-22 T 15-10-2018 IPR036514 SGNH hydrolase superfamily XDD1_0614 fbd765c0f7714c013967bb54069216bf 378 Pfam PF04311 Protein of unknown function (DUF459) 143 361 4.1E-21 T 15-10-2018 IPR007407 Protein of unknown function DUF459 XDD1_0614 fbd765c0f7714c013967bb54069216bf 378 SUPERFAMILY SSF52266 165 365 8.4E-25 T 15-10-2018 XDD1_1156 71fca647c842b20f0af869512440c73f 146 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 139 25.22 T 15-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 XDD1_1156 71fca647c842b20f0af869512440c73f 146 Gene3D G3DSA:3.30.420.140 2 139 2.4E-43 T 15-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 XDD1_1156 71fca647c842b20f0af869512440c73f 146 Pfam PF03652 Holliday junction resolvase 5 136 4.4E-40 T 15-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 XDD1_1156 71fca647c842b20f0af869512440c73f 146 SMART SM00732 4 104 2.3E-38 T 15-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 XDD1_1156 71fca647c842b20f0af869512440c73f 146 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 136 7.3E-56 T 15-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 XDD1_1156 71fca647c842b20f0af869512440c73f 146 SUPERFAMILY SSF53098 4 137 1.67E-40 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_1588 6236c2b027cf45adbf6de70635cc609d 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 2.5E-61 T 15-10-2018 IPR010275 Protein of unknown function DUF882 XDD1_1588 6236c2b027cf45adbf6de70635cc609d 182 Gene3D G3DSA:3.30.1380.10 61 182 5.5E-11 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 XDD1_1588 6236c2b027cf45adbf6de70635cc609d 182 SUPERFAMILY SSF55166 68 182 1.31E-31 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 XDD1_1247 2e6f188eb1be843c4ae6d8a5b1fc72a0 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 5.0E-7 T 15-10-2018 XDD1_1247 2e6f188eb1be843c4ae6d8a5b1fc72a0 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 5.0E-7 T 15-10-2018 XDD1_1247 2e6f188eb1be843c4ae6d8a5b1fc72a0 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 164 188 5.0E-7 T 15-10-2018 XDD1_1247 2e6f188eb1be843c4ae6d8a5b1fc72a0 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 404 423 5.0E-7 T 15-10-2018 XDD1_1247 2e6f188eb1be843c4ae6d8a5b1fc72a0 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 5.0E-7 T 15-10-2018 XDD1_1247 2e6f188eb1be843c4ae6d8a5b1fc72a0 513 Gene3D G3DSA:1.20.1720.10 15 221 1.7E-46 T 15-10-2018 XDD1_1247 2e6f188eb1be843c4ae6d8a5b1fc72a0 513 SUPERFAMILY SSF103473 7 500 5.1E-68 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1247 2e6f188eb1be843c4ae6d8a5b1fc72a0 513 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 497 1.2E-195 T 15-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 XDD1_1247 2e6f188eb1be843c4ae6d8a5b1fc72a0 513 Pfam PF07690 Major Facilitator Superfamily 20 413 7.6E-51 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0544 b8a25aef36cee9e90fb6383004df519b 321 Pfam PF04754 Putative transposase, YhgA-like 9 210 2.0E-77 T 15-10-2018 IPR006842 Transposase (putative), YhgA-like XDD1_0544 b8a25aef36cee9e90fb6383004df519b 321 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 318 2.1E-51 T 15-10-2018 IPR010106 Recombination-promoting nuclease RpnA XDD1_2902 da20b0b7935cda0756589a76da10436d 168 PIRSF PIRSF029208 1 147 2.1E-56 T 15-10-2018 IPR016912 Bacteriophage P2, GpU XDD1_2902 da20b0b7935cda0756589a76da10436d 168 Pfam PF06995 Phage P2 GpU 6 124 1.6E-45 T 15-10-2018 IPR009734 Myoviridae, GpU XDD1_2638 db1e411d6680c8fbf34b6eea7396d1d6 175 Pfam PF00583 Acetyltransferase (GNAT) family 54 137 1.1E-13 T 15-10-2018 IPR000182 GNAT domain XDD1_2638 db1e411d6680c8fbf34b6eea7396d1d6 175 Gene3D G3DSA:3.40.630.30 3 152 1.0E-21 T 15-10-2018 XDD1_2638 db1e411d6680c8fbf34b6eea7396d1d6 175 SUPERFAMILY SSF55729 6 141 4.58E-22 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_2404 9b1fca3c7f1a443a20d423e6cb6e8236 305 Gene3D G3DSA:3.40.50.11550 56 277 3.8E-72 T 15-10-2018 XDD1_2404 9b1fca3c7f1a443a20d423e6cb6e8236 305 PIRSF PIRSF020419 13 304 5.4E-81 T 15-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted XDD1_2404 9b1fca3c7f1a443a20d423e6cb6e8236 305 SUPERFAMILY SSF159501 50 297 6.8E-63 T 15-10-2018 XDD1_2404 9b1fca3c7f1a443a20d423e6cb6e8236 305 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 68 264 2.3E-36 T 15-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN XDD1_2404 9b1fca3c7f1a443a20d423e6cb6e8236 305 Gene3D G3DSA:1.10.8.760 176 232 3.8E-72 T 15-10-2018 XDD1_2012 2c8283816675b06d6d27f7db0f674d32 228 SUPERFAMILY SSF46785 3 62 3.4E-8 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_2012 2c8283816675b06d6d27f7db0f674d32 228 Pfam PF08279 HTH domain 6 59 1.1E-15 T 15-10-2018 IPR013196 Helix-turn-helix, type 11 XDD1_2012 2c8283816675b06d6d27f7db0f674d32 228 Pfam PF13280 WYL domain 139 225 8.9E-15 T 15-10-2018 IPR026881 WYL domain XDD1_2012 2c8283816675b06d6d27f7db0f674d32 228 Gene3D G3DSA:1.10.10.10 1 64 3.8E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0432 1feeda3d22ff767857e6dfb6c693fe43 105 Pfam PF00436 Single-strand binding protein family 4 82 3.8E-12 T 15-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XDD1_0432 1feeda3d22ff767857e6dfb6c693fe43 105 PIRSF PIRSF003135 1 102 7.2E-48 T 15-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 XDD1_0432 1feeda3d22ff767857e6dfb6c693fe43 105 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 4 100 3.1E-38 T 15-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 XDD1_0432 1feeda3d22ff767857e6dfb6c693fe43 105 Hamap MF_00720 Primosomal replication protein N [priB]. 3 101 24.79 T 15-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 XDD1_0432 1feeda3d22ff767857e6dfb6c693fe43 105 SUPERFAMILY SSF50249 2 104 6.85E-31 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_0432 1feeda3d22ff767857e6dfb6c693fe43 105 Gene3D G3DSA:2.40.50.140 1 105 4.4E-40 T 15-10-2018 XDD1_2084 c511b6ba7080571f0eca9eb969600385 564 SUPERFAMILY SSF56801 16 552 5.63E-150 T 15-10-2018 XDD1_2084 c511b6ba7080571f0eca9eb969600385 564 Gene3D G3DSA:3.30.300.310 457 556 1.4E-30 T 15-10-2018 XDD1_2084 c511b6ba7080571f0eca9eb969600385 564 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_2084 c511b6ba7080571f0eca9eb969600385 564 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 5.0E-18 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XDD1_2084 c511b6ba7080571f0eca9eb969600385 564 Gene3D G3DSA:3.40.50.12780 12 456 7.0E-117 T 15-10-2018 XDD1_2084 c511b6ba7080571f0eca9eb969600385 564 Pfam PF00501 AMP-binding enzyme 29 460 4.2E-109 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2491 4cee847a616684d776e4a4faa07f1e2a 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.6E-13 T 15-10-2018 XDD1_2491 4cee847a616684d776e4a4faa07f1e2a 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 1.6E-13 T 15-10-2018 XDD1_2491 4cee847a616684d776e4a4faa07f1e2a 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 1.6E-13 T 15-10-2018 XDD1_2491 4cee847a616684d776e4a4faa07f1e2a 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 1.6E-13 T 15-10-2018 XDD1_2491 4cee847a616684d776e4a4faa07f1e2a 434 SUPERFAMILY SSF51905 4 352 1.21E-30 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_2491 4cee847a616684d776e4a4faa07f1e2a 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 8.0E-8 T 15-10-2018 XDD1_2491 4cee847a616684d776e4a4faa07f1e2a 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 8.0E-8 T 15-10-2018 XDD1_2491 4cee847a616684d776e4a4faa07f1e2a 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.0E-8 T 15-10-2018 XDD1_2491 4cee847a616684d776e4a4faa07f1e2a 434 Gene3D G3DSA:3.50.50.100 1 409 6.1E-116 T 15-10-2018 XDD1_2491 4cee847a616684d776e4a4faa07f1e2a 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 338 1.0E-64 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XDD1_0657 c9c31d7d72ed58dd9905fff68e86a7d5 497 Gene3D G3DSA:3.40.309.10 274 463 3.2E-167 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 XDD1_0657 c9c31d7d72ed58dd9905fff68e86a7d5 497 SUPERFAMILY SSF53720 10 496 2.62E-154 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XDD1_0657 c9c31d7d72ed58dd9905fff68e86a7d5 497 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 269 276 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 XDD1_0657 c9c31d7d72ed58dd9905fff68e86a7d5 497 Gene3D G3DSA:3.40.605.10 22 491 3.2E-167 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 XDD1_0657 c9c31d7d72ed58dd9905fff68e86a7d5 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 297 308 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 XDD1_0657 c9c31d7d72ed58dd9905fff68e86a7d5 497 Pfam PF00171 Aldehyde dehydrogenase family 30 493 2.9E-153 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 XDD1_3760 2d6a8d4bb12072de128548e9b3d2b667 431 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 8 419 3.3E-115 T 15-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein XDD1_3169 fee2c3a5f7dba9de0b1abf008fdaf354 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 2.5E-162 T 15-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XDD1_3169 fee2c3a5f7dba9de0b1abf008fdaf354 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 3.7E-64 T 15-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 XDD1_3169 fee2c3a5f7dba9de0b1abf008fdaf354 302 Gene3D G3DSA:3.40.50.620 7 212 9.7E-65 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_3169 fee2c3a5f7dba9de0b1abf008fdaf354 302 PIRSF PIRSF002936 1 302 5.9E-154 T 15-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XDD1_3169 fee2c3a5f7dba9de0b1abf008fdaf354 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 57.354 T 15-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XDD1_3169 fee2c3a5f7dba9de0b1abf008fdaf354 302 SUPERFAMILY SSF52402 6 209 1.57E-74 T 15-10-2018 XDD1_1012 5ed888b99be87b8b0d24f2abaa5e5f78 172 SMART SM00903 15 162 8.4E-54 T 15-10-2018 IPR002563 Flavin reductase like domain GO:0010181 XDD1_1012 5ed888b99be87b8b0d24f2abaa5e5f78 172 Pfam PF01613 Flavin reductase like domain 15 163 3.0E-27 T 15-10-2018 IPR002563 Flavin reductase like domain GO:0010181 XDD1_1012 5ed888b99be87b8b0d24f2abaa5e5f78 172 SUPERFAMILY SSF50475 10 163 6.38E-48 T 15-10-2018 XDD1_1012 5ed888b99be87b8b0d24f2abaa5e5f78 172 Gene3D G3DSA:2.30.110.10 1 169 2.4E-42 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 XDD1_1012 5ed888b99be87b8b0d24f2abaa5e5f78 172 TIGRFAM TIGR02296 HpaC: 4-hydroxyphenylacetate 3-monooxygenase, reductase component 11 164 1.5E-77 T 15-10-2018 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component GO:0016651|GO:0042537|GO:0051287|GO:0055114 KEGG: 00740+1.5.1.36 XDD1_3010 c67954bb5dd47286162e08ab6307c4ea 179 Pfam PF06558 Secretion monitor precursor protein (SecM) 23 177 3.9E-47 T 15-10-2018 IPR009502 Secretion monitor GO:0045182 XDD1_3010 c67954bb5dd47286162e08ab6307c4ea 179 PIRSF PIRSF004572 1 179 2.5E-57 T 15-10-2018 IPR009502 Secretion monitor GO:0045182 XDD1_3010 c67954bb5dd47286162e08ab6307c4ea 179 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 3 176 2.0E-50 T 15-10-2018 IPR009502 Secretion monitor GO:0045182 XDD1_3010 c67954bb5dd47286162e08ab6307c4ea 179 Hamap MF_01332 Secretion monitor [secM]. 1 179 28.875 T 15-10-2018 IPR009502 Secretion monitor GO:0045182 XDD1_2583 1dbc67aab3e0a981b0a722a58f92c9e3 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.633 T 15-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 XDD1_2583 1dbc67aab3e0a981b0a722a58f92c9e3 485 Pfam PF00361 Proton-conducting membrane transporter 122 420 5.6E-81 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XDD1_2583 1dbc67aab3e0a981b0a722a58f92c9e3 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 1.7E-133 T 15-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 XDD1_0498 a34310ce93e0212b81c9448ad7dc91eb 154 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 152 3.3E-62 T 15-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 XDD1_0498 a34310ce93e0212b81c9448ad7dc91eb 154 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 15-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 XDD1_0498 a34310ce93e0212b81c9448ad7dc91eb 154 SUPERFAMILY SSF102114 24 108 4.05E-7 T 15-10-2018 XDD1_0498 a34310ce93e0212b81c9448ad7dc91eb 154 Pfam PF13353 4Fe-4S single cluster domain 12 151 2.7E-51 T 15-10-2018 XDD1_0498 a34310ce93e0212b81c9448ad7dc91eb 154 Gene3D G3DSA:3.20.20.70 2 153 6.2E-20 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_0498 a34310ce93e0212b81c9448ad7dc91eb 154 PIRSF PIRSF000368 1 154 7.7E-58 T 15-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 XDD1_2369 c9869f884126a953421777e91bc0eaa9 350 Gene3D G3DSA:3.40.50.180 149 350 5.5E-83 T 15-10-2018 IPR035909 Methylesterase CheB, C-terminal XDD1_2369 c9869f884126a953421777e91bc0eaa9 350 PIRSF PIRSF000876 1 347 2.9E-137 T 15-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 XDD1_2369 c9869f884126a953421777e91bc0eaa9 350 Gene3D G3DSA:3.40.50.2300 1 133 2.9E-32 T 15-10-2018 XDD1_2369 c9869f884126a953421777e91bc0eaa9 350 SMART SM00448 4 119 9.4E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_2369 c9869f884126a953421777e91bc0eaa9 350 Pfam PF01339 CheB methylesterase 160 337 2.2E-64 T 15-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 XDD1_2369 c9869f884126a953421777e91bc0eaa9 350 SUPERFAMILY SSF52738 157 343 3.4E-75 T 15-10-2018 IPR035909 Methylesterase CheB, C-terminal XDD1_2369 c9869f884126a953421777e91bc0eaa9 350 SUPERFAMILY SSF52172 1 108 7.26E-28 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_2369 c9869f884126a953421777e91bc0eaa9 350 Pfam PF00072 Response regulator receiver domain 6 109 2.3E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_2369 c9869f884126a953421777e91bc0eaa9 350 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 343 41.073 T 15-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 XDD1_2314 a1f1bd675ed697fa337cca5cd9695a37 148 Pfam PF02050 Flagellar FliJ protein 19 140 8.0E-33 T 15-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 XDD1_2314 a1f1bd675ed697fa337cca5cd9695a37 148 PIRSF PIRSF019404 1 148 1.8E-48 T 15-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 XDD1_2314 a1f1bd675ed697fa337cca5cd9695a37 148 PRINTS PR01004 Flagellar FliJ protein signature 126 146 8.6E-36 T 15-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 XDD1_2314 a1f1bd675ed697fa337cca5cd9695a37 148 PRINTS PR01004 Flagellar FliJ protein signature 4 26 8.6E-36 T 15-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 XDD1_2314 a1f1bd675ed697fa337cca5cd9695a37 148 PRINTS PR01004 Flagellar FliJ protein signature 63 84 8.6E-36 T 15-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 XDD1_2314 a1f1bd675ed697fa337cca5cd9695a37 148 PRINTS PR01004 Flagellar FliJ protein signature 86 107 8.6E-36 T 15-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 XDD1_2314 a1f1bd675ed697fa337cca5cd9695a37 148 PRINTS PR01004 Flagellar FliJ protein signature 108 126 8.6E-36 T 15-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 XDD1_2314 a1f1bd675ed697fa337cca5cd9695a37 148 PRINTS PR01004 Flagellar FliJ protein signature 44 61 8.6E-36 T 15-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 XDD1_2314 a1f1bd675ed697fa337cca5cd9695a37 148 PRINTS PR01004 Flagellar FliJ protein signature 27 43 8.6E-36 T 15-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 XDD1_2314 a1f1bd675ed697fa337cca5cd9695a37 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 143 5.8E-34 T 15-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 XDD1_1464 25ca0d35eedc226cd093d0ae28b42847 120 Gene3D G3DSA:3.30.420.10 1 120 3.3E-7 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_1464 25ca0d35eedc226cd093d0ae28b42847 120 SUPERFAMILY SSF53098 1 119 4.55E-20 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_1464 25ca0d35eedc226cd093d0ae28b42847 120 Pfam PF00665 Integrase core domain 2 88 1.1E-10 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_0904 5534542257f04cf1448570351bcec8ab 636 SUPERFAMILY SSF52540 34 222 3.08E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0904 5534542257f04cf1448570351bcec8ab 636 Gene3D G3DSA:1.10.8.60 8 240 7.0E-101 T 15-10-2018 XDD1_0904 5534542257f04cf1448570351bcec8ab 636 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 492 633 8.1E-58 T 15-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_0904 5534542257f04cf1448570351bcec8ab 636 Gene3D G3DSA:3.30.300.150 490 618 7.6E-45 T 15-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_0904 5534542257f04cf1448570351bcec8ab 636 Gene3D G3DSA:1.20.272.10 242 363 3.8E-41 T 15-10-2018 XDD1_0904 5534542257f04cf1448570351bcec8ab 636 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 413 490 5.5E-16 T 15-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XDD1_0904 5534542257f04cf1448570351bcec8ab 636 SUPERFAMILY SSF48019 243 367 2.38E-33 T 15-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 XDD1_0904 5534542257f04cf1448570351bcec8ab 636 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 2.7E-5 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_0904 5534542257f04cf1448570351bcec8ab 636 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 2.7E-5 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 XDD1_0904 5534542257f04cf1448570351bcec8ab 636 Gene3D G3DSA:3.40.50.300 13 177 7.0E-101 T 15-10-2018 XDD1_0904 5534542257f04cf1448570351bcec8ab 636 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 364 3.3E-31 T 15-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 XDD1_0904 5534542257f04cf1448570351bcec8ab 636 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 1.8E-130 T 15-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 XDD1_0904 5534542257f04cf1448570351bcec8ab 636 Pfam PF13177 DNA polymerase III, delta subunit 20 178 3.0E-43 T 15-10-2018 XDD1_0904 5534542257f04cf1448570351bcec8ab 636 SMART SM00382 37 178 1.9E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_0971 c0b968bc0e37aa2d211986c955b6f24b 405 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 21 368 6.0E-95 T 15-10-2018 IPR018683 Domain of unknown function DUF2169 XDD1_3265 cd141130509e8da7aba73e36fafad71d 110 PIRSF PIRSF039032 1 110 5.5E-39 T 15-10-2018 IPR009387 Toxin HigB-2 XDD1_3265 cd141130509e8da7aba73e36fafad71d 110 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 13 106 3.2E-10 T 15-10-2018 IPR009387 Toxin HigB-2 XDD1_2487 8beddb0cc96dabe87d8341b0364d47ca 400 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 400 3.3E-135 T 15-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 XDD1_2487 8beddb0cc96dabe87d8341b0364d47ca 400 Pfam PF12704 MacB-like periplasmic core domain 27 207 5.4E-13 T 15-10-2018 IPR025857 MacB-like periplasmic core domain XDD1_2487 8beddb0cc96dabe87d8341b0364d47ca 400 Pfam PF02687 FtsX-like permease family 296 393 3.2E-11 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 XDD1_2047 cbbe7e64815f55035737ad58f563d617 355 Gene3D G3DSA:2.160.20.100 5 158 5.3E-25 T 15-10-2018 XDD1_2047 cbbe7e64815f55035737ad58f563d617 355 Pfam PF00805 Pentapeptide repeats (8 copies) 273 310 9.1E-6 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_2047 cbbe7e64815f55035737ad58f563d617 355 Pfam PF00805 Pentapeptide repeats (8 copies) 23 61 2.7E-5 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_2047 cbbe7e64815f55035737ad58f563d617 355 SUPERFAMILY SSF141571 11 154 3.24E-26 T 15-10-2018 XDD1_2047 cbbe7e64815f55035737ad58f563d617 355 Gene3D G3DSA:2.160.20.80 159 339 2.0E-31 T 15-10-2018 XDD1_2047 cbbe7e64815f55035737ad58f563d617 355 Pfam PF13599 Pentapeptide repeats (9 copies) 82 154 8.5E-10 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_2047 cbbe7e64815f55035737ad58f563d617 355 Pfam PF13599 Pentapeptide repeats (9 copies) 194 269 9.1E-9 T 15-10-2018 IPR001646 Pentapeptide repeat XDD1_2047 cbbe7e64815f55035737ad58f563d617 355 SUPERFAMILY SSF141571 158 329 3.04E-33 T 15-10-2018 XDD1_0969 914e6b5ba36c1ac965d1a4b2c64bd293 1540 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1321 1390 5.1E-23 T 15-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 XDD1_0969 914e6b5ba36c1ac965d1a4b2c64bd293 1540 Pfam PF05593 RHS Repeat 764 797 3.6E-5 T 15-10-2018 IPR031325 RHS repeat XDD1_0969 914e6b5ba36c1ac965d1a4b2c64bd293 1540 Pfam PF05593 RHS Repeat 629 658 1.5E-5 T 15-10-2018 IPR031325 RHS repeat XDD1_0969 914e6b5ba36c1ac965d1a4b2c64bd293 1540 Pfam PF05593 RHS Repeat 650 685 1.0E-11 T 15-10-2018 IPR031325 RHS repeat XDD1_0969 914e6b5ba36c1ac965d1a4b2c64bd293 1540 Pfam PF05593 RHS Repeat 786 818 3.8E-5 T 15-10-2018 IPR031325 RHS repeat XDD1_0969 914e6b5ba36c1ac965d1a4b2c64bd293 1540 Pfam PF05593 RHS Repeat 524 559 1.1E-4 T 15-10-2018 IPR031325 RHS repeat XDD1_0969 914e6b5ba36c1ac965d1a4b2c64bd293 1540 Gene3D G3DSA:3.90.930.1 660 828 3.1E-14 T 15-10-2018 XDD1_0969 914e6b5ba36c1ac965d1a4b2c64bd293 1540 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 567 606 1.3E-5 T 15-10-2018 IPR006530 YD repeat XDD1_0969 914e6b5ba36c1ac965d1a4b2c64bd293 1540 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 629 670 1.2E-7 T 15-10-2018 IPR006530 YD repeat XDD1_0969 914e6b5ba36c1ac965d1a4b2c64bd293 1540 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 845 885 8.7E-6 T 15-10-2018 IPR006530 YD repeat XDD1_0969 914e6b5ba36c1ac965d1a4b2c64bd293 1540 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 524 558 9.7E-5 T 15-10-2018 IPR006530 YD repeat XDD1_0969 914e6b5ba36c1ac965d1a4b2c64bd293 1540 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1170 1200 2.9E-8 T 15-10-2018 IPR006530 YD repeat XDD1_0969 914e6b5ba36c1ac965d1a4b2c64bd293 1540 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 713 753 2.9E-4 T 15-10-2018 IPR006530 YD repeat XDD1_0969 914e6b5ba36c1ac965d1a4b2c64bd293 1540 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 442 472 0.0015 T 15-10-2018 IPR006530 YD repeat XDD1_0969 914e6b5ba36c1ac965d1a4b2c64bd293 1540 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 763 801 3.8E-6 T 15-10-2018 IPR006530 YD repeat XDD1_0969 914e6b5ba36c1ac965d1a4b2c64bd293 1540 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 671 712 2.4E-6 T 15-10-2018 IPR006530 YD repeat XDD1_0969 914e6b5ba36c1ac965d1a4b2c64bd293 1540 Gene3D G3DSA:2.180.10.10 836 1164 2.9E-9 T 15-10-2018 XDD1_0969 914e6b5ba36c1ac965d1a4b2c64bd293 1540 Gene3D G3DSA:2.180.10.10 1165 1390 4.9E-32 T 15-10-2018 XDD1_0192 0fa526e9b63aad3104004fb8ecad6286 80 Pfam PF06005 Cell division protein ZapB 1 77 1.5E-28 T 15-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 XDD1_0192 0fa526e9b63aad3104004fb8ecad6286 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.24 T 15-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 XDD1_0192 0fa526e9b63aad3104004fb8ecad6286 80 Gene3D G3DSA:1.20.5.340 1 79 1.1E-32 T 15-10-2018 XDD1_0582 a0d2ce0b6696b2edc068cdf44f05c4aa 798 SUPERFAMILY SSF51905 7 360 8.35E-35 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0582 a0d2ce0b6696b2edc068cdf44f05c4aa 798 SUPERFAMILY SSF51395 409 766 4.23E-113 T 15-10-2018 XDD1_0582 a0d2ce0b6696b2edc068cdf44f05c4aa 798 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 413 743 8.3E-64 T 15-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 XDD1_0582 a0d2ce0b6696b2edc068cdf44f05c4aa 798 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 7.3E-9 T 15-10-2018 XDD1_0582 a0d2ce0b6696b2edc068cdf44f05c4aa 798 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 298 7.3E-9 T 15-10-2018 XDD1_0582 a0d2ce0b6696b2edc068cdf44f05c4aa 798 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 136 151 7.3E-9 T 15-10-2018 XDD1_0582 a0d2ce0b6696b2edc068cdf44f05c4aa 798 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 314 7.3E-9 T 15-10-2018 XDD1_0582 a0d2ce0b6696b2edc068cdf44f05c4aa 798 Gene3D G3DSA:3.20.20.70 411 753 4.6E-111 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_0582 a0d2ce0b6696b2edc068cdf44f05c4aa 798 Gene3D G3DSA:3.50.50.60 8 357 1.7E-119 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0582 a0d2ce0b6696b2edc068cdf44f05c4aa 798 Gene3D G3DSA:3.30.9.20 45 261 1.7E-119 T 15-10-2018 XDD1_3233 75d1826956c90e476a90b613d99ac9ed 87 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 80 2.9E-38 T 15-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain XDD1_3233 75d1826956c90e476a90b613d99ac9ed 87 SUPERFAMILY SSF47413 2 73 2.62E-31 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_3233 75d1826956c90e476a90b613d99ac9ed 87 Gene3D G3DSA:1.10.260.40 1 71 4.7E-33 T 15-10-2018 XDD1_1678 2d96f2e7182f2414706ee183fb231a4e 449 Pfam PF00589 Phage integrase family 251 414 7.2E-16 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XDD1_1678 2d96f2e7182f2414706ee183fb231a4e 449 Gene3D G3DSA:3.30.160.390 30 118 7.0E-32 T 15-10-2018 IPR038488 Integrase, DNA-binding domain superfamily XDD1_1678 2d96f2e7182f2414706ee183fb231a4e 449 Pfam PF13356 Arm DNA-binding domain 32 117 2.6E-20 T 15-10-2018 IPR025166 Integrase, DNA-binding domain XDD1_1678 2d96f2e7182f2414706ee183fb231a4e 449 Gene3D G3DSA:1.10.443.10 235 426 4.5E-10 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XDD1_1678 2d96f2e7182f2414706ee183fb231a4e 449 Gene3D G3DSA:1.10.150.130 119 233 1.9E-29 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal XDD1_1678 2d96f2e7182f2414706ee183fb231a4e 449 SUPERFAMILY SSF56349 128 417 2.94E-45 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XDD1_0917 b811078a4101a3d3a54d6f12a04e8d10 552 SUPERFAMILY SSF56300 27 363 2.11E-96 T 15-10-2018 XDD1_0917 b811078a4101a3d3a54d6f12a04e8d10 552 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 15-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0917 b811078a4101a3d3a54d6f12a04e8d10 552 Pfam PF02872 5'-nucleotidase, C-terminal domain 365 509 7.1E-31 T 15-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0917 b811078a4101a3d3a54d6f12a04e8d10 552 SUPERFAMILY SSF55816 365 544 3.4E-52 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0917 b811078a4101a3d3a54d6f12a04e8d10 552 PRINTS PR01607 Apyrase family signature 207 224 1.4E-56 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0917 b811078a4101a3d3a54d6f12a04e8d10 552 PRINTS PR01607 Apyrase family signature 419 442 1.4E-56 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0917 b811078a4101a3d3a54d6f12a04e8d10 552 PRINTS PR01607 Apyrase family signature 486 505 1.4E-56 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0917 b811078a4101a3d3a54d6f12a04e8d10 552 PRINTS PR01607 Apyrase family signature 238 261 1.4E-56 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0917 b811078a4101a3d3a54d6f12a04e8d10 552 PRINTS PR01607 Apyrase family signature 32 50 1.4E-56 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0917 b811078a4101a3d3a54d6f12a04e8d10 552 PRINTS PR01607 Apyrase family signature 285 305 1.4E-56 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0917 b811078a4101a3d3a54d6f12a04e8d10 552 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 9.5E-17 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 XDD1_0917 b811078a4101a3d3a54d6f12a04e8d10 552 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 15-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0917 b811078a4101a3d3a54d6f12a04e8d10 552 Gene3D G3DSA:3.90.780.10 365 551 1.5E-61 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 XDD1_0917 b811078a4101a3d3a54d6f12a04e8d10 552 Gene3D G3DSA:3.60.21.10 26 364 2.0E-130 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like XDD1_2032 98c590b881998009ad30bc8771b04dae 624 PIRSF PIRSF028304 1 624 2.2E-174 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like XDD1_2032 98c590b881998009ad30bc8771b04dae 624 Pfam PF05947 Type VI secretion system, TssF 6 622 2.6E-211 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like XDD1_2032 98c590b881998009ad30bc8771b04dae 624 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 624 1.1E-182 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like XDD1_3236 fb41c3a2c923f330e824713422d2f415 117 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 6 110 4.8E-17 T 15-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family XDD1_3236 fb41c3a2c923f330e824713422d2f415 117 Pfam PF05119 Phage terminase, small subunit 15 109 1.4E-18 T 15-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family XDD1_2362 eee110f376558c4dfb9219de3027dd37 611 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 308 405 4.7E-8 T 15-10-2018 IPR018712 Domain of unknown function DUF2235 XDD1_3910 8d8ec74af29860e402253a7934b0d535 449 Pfam PF10797 Protein of unknown function 20 448 1.1E-175 T 15-10-2018 IPR019733 Uncharacterised protein family YhfT XDD1_1319 3a0f9cf09a95fe901d8c0c64855e96d5 345 SUPERFAMILY SSF53335 105 342 3.98E-46 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_1319 3a0f9cf09a95fe901d8c0c64855e96d5 345 PIRSF PIRSF005739 2 344 2.2E-55 T 15-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 XDD1_1319 3a0f9cf09a95fe901d8c0c64855e96d5 345 Gene3D G3DSA:3.40.50.150 99 344 3.6E-68 T 15-10-2018 XDD1_1319 3a0f9cf09a95fe901d8c0c64855e96d5 345 Pfam PF00891 O-methyltransferase 115 326 1.7E-39 T 15-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 XDD1_1319 3a0f9cf09a95fe901d8c0c64855e96d5 345 Gene3D G3DSA:1.10.10.10 7 98 2.7E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1319 3a0f9cf09a95fe901d8c0c64855e96d5 345 SUPERFAMILY SSF46785 17 101 1.72E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_0919 8f0c9e063e82d514d2c2f8f34b269cee 158 Pfam PF04073 Aminoacyl-tRNA editing domain 31 145 1.1E-23 T 15-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 XDD1_0919 8f0c9e063e82d514d2c2f8f34b269cee 158 Gene3D G3DSA:3.90.960.10 1 157 1.1E-60 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 XDD1_0919 8f0c9e063e82d514d2c2f8f34b269cee 158 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 7.9E-55 T 15-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC XDD1_0919 8f0c9e063e82d514d2c2f8f34b269cee 158 SUPERFAMILY SSF55826 2 155 1.7E-44 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 XDD1_0919 8f0c9e063e82d514d2c2f8f34b269cee 158 PIRSF PIRSF006181 1 158 5.8E-55 T 15-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC XDD1_0762 578ac584ad006f543017c46948d43f2e 423 Pfam PF07690 Major Facilitator Superfamily 59 386 2.3E-34 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0762 578ac584ad006f543017c46948d43f2e 423 Gene3D G3DSA:1.20.1250.20 13 422 3.0E-61 T 15-10-2018 XDD1_0762 578ac584ad006f543017c46948d43f2e 423 SUPERFAMILY SSF103473 7 419 3.01E-62 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1244 7a12cb6cf626e2ae3a1adfb2b3422452 437 Gene3D G3DSA:3.50.50.60 1 426 7.0E-112 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1244 7a12cb6cf626e2ae3a1adfb2b3422452 437 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 4 345 5.6E-120 T 15-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase XDD1_1244 7a12cb6cf626e2ae3a1adfb2b3422452 437 SUPERFAMILY SSF51905 3 269 2.35E-17 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_3745 3e3f456929350802a2419ca3349628af 1560 Pfam PF05593 RHS Repeat 669 702 1.4E-6 T 15-10-2018 IPR031325 RHS repeat XDD1_3745 3e3f456929350802a2419ca3349628af 1560 Pfam PF05593 RHS Repeat 750 786 5.1E-7 T 15-10-2018 IPR031325 RHS repeat XDD1_3745 3e3f456929350802a2419ca3349628af 1560 Pfam PF05593 RHS Repeat 898 935 6.8E-8 T 15-10-2018 IPR031325 RHS repeat XDD1_3745 3e3f456929350802a2419ca3349628af 1560 Gene3D G3DSA:2.180.10.10 1052 1392 1.1E-29 T 15-10-2018 XDD1_3745 3e3f456929350802a2419ca3349628af 1560 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 771 809 0.0013 T 15-10-2018 IPR006530 YD repeat XDD1_3745 3e3f456929350802a2419ca3349628af 1560 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 670 702 6.3E-7 T 15-10-2018 IPR006530 YD repeat XDD1_3745 3e3f456929350802a2419ca3349628af 1560 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 623 663 0.0012 T 15-10-2018 IPR006530 YD repeat XDD1_3745 3e3f456929350802a2419ca3349628af 1560 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 861 896 5.4E-6 T 15-10-2018 IPR006530 YD repeat XDD1_3745 3e3f456929350802a2419ca3349628af 1560 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 919 952 2.6E-5 T 15-10-2018 IPR006530 YD repeat XDD1_3745 3e3f456929350802a2419ca3349628af 1560 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 898 937 5.0E-6 T 15-10-2018 IPR006530 YD repeat XDD1_3745 3e3f456929350802a2419ca3349628af 1560 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 730 769 0.0014 T 15-10-2018 IPR006530 YD repeat XDD1_3745 3e3f456929350802a2419ca3349628af 1560 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1189 1220 4.8E-5 T 15-10-2018 IPR006530 YD repeat XDD1_3745 3e3f456929350802a2419ca3349628af 1560 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 878 918 2.8E-8 T 15-10-2018 IPR006530 YD repeat XDD1_3745 3e3f456929350802a2419ca3349628af 1560 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 939 975 0.0014 T 15-10-2018 IPR006530 YD repeat XDD1_3745 3e3f456929350802a2419ca3349628af 1560 Pfam PF05488 PAAR motif 116 177 8.0E-16 T 15-10-2018 IPR008727 PAAR motif XDD1_3745 3e3f456929350802a2419ca3349628af 1560 Gene3D G3DSA:3.90.930.1 604 734 1.3E-7 T 15-10-2018 XDD1_3745 3e3f456929350802a2419ca3349628af 1560 Gene3D G3DSA:3.90.930.1 844 988 9.2E-10 T 15-10-2018 XDD1_3745 3e3f456929350802a2419ca3349628af 1560 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1314 1392 2.9E-20 T 15-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 XDD1_3745 3e3f456929350802a2419ca3349628af 1560 Gene3D G3DSA:2.60.200.60 101 187 1.4E-24 T 15-10-2018 XDD1_0599 5e5ab9d33d87ecb115288bb69bc51510 142 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 137 2.6E-6 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain XDD1_0599 5e5ab9d33d87ecb115288bb69bc51510 142 Gene3D G3DSA:3.10.180.10 9 142 3.2E-52 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XDD1_0599 5e5ab9d33d87ecb115288bb69bc51510 142 SUPERFAMILY SSF54593 14 141 7.65E-21 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XDD1_3550 29a441c0b24abb9fdeacc7cd2241b2e4 195 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 31.15 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 XDD1_3550 29a441c0b24abb9fdeacc7cd2241b2e4 195 Pfam PF02545 Maf-like protein 4 184 7.5E-57 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 XDD1_3550 29a441c0b24abb9fdeacc7cd2241b2e4 195 Gene3D G3DSA:3.90.950.10 2 189 4.9E-71 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XDD1_3550 29a441c0b24abb9fdeacc7cd2241b2e4 195 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 181 6.4E-65 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 XDD1_3550 29a441c0b24abb9fdeacc7cd2241b2e4 195 SUPERFAMILY SSF52972 2 184 1.11E-61 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XDD1_3550 29a441c0b24abb9fdeacc7cd2241b2e4 195 PIRSF PIRSF006305 1 191 3.4E-51 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 XDD1_0281 68d142844f1ffb71f4c241cf9e3c1989 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 34.086 T 15-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0281 68d142844f1ffb71f4c241cf9e3c1989 201 Gene3D G3DSA:3.40.1370.10 1 201 1.2E-69 T 15-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 XDD1_0281 68d142844f1ffb71f4c241cf9e3c1989 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 6.7E-65 T 15-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 XDD1_0281 68d142844f1ffb71f4c241cf9e3c1989 201 SUPERFAMILY SSF52166 10 200 1.57E-73 T 15-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 XDD1_0281 68d142844f1ffb71f4c241cf9e3c1989 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 1.2E-75 T 15-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3539 3b1c3e483dd1e0406d25f92de9107f76 178 Gene3D G3DSA:1.10.60.30 111 178 2.2E-27 T 15-10-2018 XDD1_3539 3b1c3e483dd1e0406d25f92de9107f76 178 Gene3D G3DSA:1.10.60.30 34 107 1.2E-21 T 15-10-2018 XDD1_3539 3b1c3e483dd1e0406d25f92de9107f76 178 Pfam PF04751 Protein of unknown function (DUF615) 23 172 1.5E-55 T 15-10-2018 IPR006839 Ribosome-associated, YjgA XDD1_3539 3b1c3e483dd1e0406d25f92de9107f76 178 SUPERFAMILY SSF158710 36 175 6.28E-51 T 15-10-2018 IPR023153 PSPTO4464-like domain superfamily XDD1_3539 3b1c3e483dd1e0406d25f92de9107f76 178 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 13 176 23.158 T 15-10-2018 IPR006839 Ribosome-associated, YjgA XDD1_3539 3b1c3e483dd1e0406d25f92de9107f76 178 PIRSF PIRSF016183 7 178 5.6E-70 T 15-10-2018 IPR006839 Ribosome-associated, YjgA XDD1_3722 7222a02f174767c26b78c80694bb2d09 116 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 59 109 4.1E-8 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 XDD1_1964 3f5c01946b203ddf188223aeca1b1854 409 SUPERFAMILY SSF50621 266 395 1.28E-32 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XDD1_1964 3f5c01946b203ddf188223aeca1b1854 409 Gene3D G3DSA:3.20.20.10 31 269 8.6E-51 T 15-10-2018 IPR029066 PLP-binding barrel XDD1_1964 3f5c01946b203ddf188223aeca1b1854 409 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 72 84 5.2E-10 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XDD1_1964 3f5c01946b203ddf188223aeca1b1854 409 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 52 70 5.2E-10 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XDD1_1964 3f5c01946b203ddf188223aeca1b1854 409 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 269 288 5.2E-10 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XDD1_1964 3f5c01946b203ddf188223aeca1b1854 409 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 184 197 5.2E-10 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XDD1_1964 3f5c01946b203ddf188223aeca1b1854 409 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 280 371 1.1E-12 T 15-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 XDD1_1964 3f5c01946b203ddf188223aeca1b1854 409 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 222 238 - T 15-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site XDD1_1964 3f5c01946b203ddf188223aeca1b1854 409 SUPERFAMILY SSF51419 29 282 6.25E-57 T 15-10-2018 IPR029066 PLP-binding barrel XDD1_1964 3f5c01946b203ddf188223aeca1b1854 409 Gene3D G3DSA:2.40.37.10 270 404 8.2E-39 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XDD1_1964 3f5c01946b203ddf188223aeca1b1854 409 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 32 279 1.1E-29 T 15-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 XDD1_1984 d3aba9c2320dc520e48d05a5e1831762 189 Pfam PF05962 HutD 10 166 2.2E-41 T 15-10-2018 IPR010282 Uncharacterised protein family HutD/Ves XDD1_1984 d3aba9c2320dc520e48d05a5e1831762 189 Gene3D G3DSA:2.60.120.10 11 149 2.6E-26 T 15-10-2018 IPR014710 RmlC-like jelly roll fold XDD1_1984 d3aba9c2320dc520e48d05a5e1831762 189 Gene3D G3DSA:2.60.120.10 12 113 2.6E-26 T 15-10-2018 IPR014710 RmlC-like jelly roll fold XDD1_1984 d3aba9c2320dc520e48d05a5e1831762 189 SUPERFAMILY SSF51182 1 186 3.74E-40 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily XDD1_2481 956feed93bd605c69f2c0cfa22e8ebfc 488 Pfam PF08918 PhoQ Sensor 9 188 5.8E-79 T 15-10-2018 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 XDD1_2481 956feed93bd605c69f2c0cfa22e8ebfc 488 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 379 478 4.9E-13 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_2481 956feed93bd605c69f2c0cfa22e8ebfc 488 Gene3D G3DSA:3.30.450.140 43 195 1.4E-55 T 15-10-2018 IPR038429 PhoQ Sensor superfamily XDD1_2481 956feed93bd605c69f2c0cfa22e8ebfc 488 Gene3D G3DSA:1.10.287.130 216 324 1.2E-5 T 15-10-2018 XDD1_2481 956feed93bd605c69f2c0cfa22e8ebfc 488 Gene3D G3DSA:3.30.565.10 339 486 1.1E-31 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_2481 956feed93bd605c69f2c0cfa22e8ebfc 488 SUPERFAMILY SSF55874 344 478 5.76E-29 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_2481 956feed93bd605c69f2c0cfa22e8ebfc 488 SMART SM00387 376 482 1.0E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_2481 956feed93bd605c69f2c0cfa22e8ebfc 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 460 2.6E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2481 956feed93bd605c69f2c0cfa22e8ebfc 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 2.6E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2481 956feed93bd605c69f2c0cfa22e8ebfc 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 439 2.6E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XDD1_2475 1a80ed4f4b5b5a16e2eae24bc0e18398 152 PRINTS PR00502 NUDIX hydrolase family signature 45 60 9.4E-5 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 XDD1_2475 1a80ed4f4b5b5a16e2eae24bc0e18398 152 PRINTS PR00502 NUDIX hydrolase family signature 31 45 9.4E-5 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 XDD1_2475 1a80ed4f4b5b5a16e2eae24bc0e18398 152 Gene3D G3DSA:3.90.79.10 1 152 6.3E-42 T 15-10-2018 XDD1_2475 1a80ed4f4b5b5a16e2eae24bc0e18398 152 SUPERFAMILY SSF55811 3 137 8.39E-30 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XDD1_2475 1a80ed4f4b5b5a16e2eae24bc0e18398 152 Pfam PF00293 NUDIX domain 4 114 9.6E-17 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XDD1_2475 1a80ed4f4b5b5a16e2eae24bc0e18398 152 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XDD1_0383 237a9a321e26c83690767cb4e2901144 275 Gene3D G3DSA:3.40.50.1000 5 256 1.5E-75 T 15-10-2018 IPR023214 HAD superfamily XDD1_0383 237a9a321e26c83690767cb4e2901144 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 231 4.6E-26 T 15-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 XDD1_0383 237a9a321e26c83690767cb4e2901144 275 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 15-10-2018 XDD1_0383 237a9a321e26c83690767cb4e2901144 275 Gene3D G3DSA:3.30.1240.10 82 186 1.5E-75 T 15-10-2018 XDD1_0383 237a9a321e26c83690767cb4e2901144 275 SUPERFAMILY SSF56784 1 264 4.21E-66 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_0383 237a9a321e26c83690767cb4e2901144 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 259 2.6E-60 T 15-10-2018 XDD1_0383 237a9a321e26c83690767cb4e2901144 275 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 15-10-2018 XDD1_0383 237a9a321e26c83690767cb4e2901144 275 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 259 3.7E-60 T 15-10-2018 IPR000150 Cof family GO:0016787 XDD1_1664 1aa24e2622d870ee0879224ac7c97035 167 Pfam PF00583 Acetyltransferase (GNAT) family 37 137 7.1E-21 T 15-10-2018 IPR000182 GNAT domain XDD1_1664 1aa24e2622d870ee0879224ac7c97035 167 SUPERFAMILY SSF55729 3 162 1.34E-39 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_1664 1aa24e2622d870ee0879224ac7c97035 167 Gene3D G3DSA:3.40.630.30 1 165 1.4E-44 T 15-10-2018 XDD1_0589 23e7e023efc735dc47c15fa423b691f1 383 Gene3D G3DSA:2.40.160.50 97 382 3.0E-10 T 15-10-2018 XDD1_0589 23e7e023efc735dc47c15fa423b691f1 383 Pfam PF01103 Surface antigen 99 383 4.2E-15 T 15-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 XDD1_0589 23e7e023efc735dc47c15fa423b691f1 383 SUPERFAMILY SSF56935 95 376 8.7E-5 T 15-10-2018 XDD1_3694 d73238b1215f42e84683f87d6b84d22a 200 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 6 185 5.2E-65 T 15-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 XDD1_3694 d73238b1215f42e84683f87d6b84d22a 200 SUPERFAMILY SSF53448 4 184 1.64E-29 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_3694 d73238b1215f42e84683f87d6b84d22a 200 Gene3D G3DSA:3.90.550.10 2 196 6.2E-51 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_3694 d73238b1215f42e84683f87d6b84d22a 200 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 4 188 26.738 T 15-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 XDD1_3694 d73238b1215f42e84683f87d6b84d22a 200 Pfam PF12804 MobA-like NTP transferase domain 8 160 7.0E-30 T 15-10-2018 IPR025877 MobA-like NTP transferase XDD1_0816 05b3d337c259ed18da48fd00c9297483 544 Gene3D G3DSA:3.40.190.10 49 526 8.0E-182 T 15-10-2018 XDD1_0816 05b3d337c259ed18da48fd00c9297483 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 88 467 2.3E-92 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain XDD1_0816 05b3d337c259ed18da48fd00c9297483 544 SUPERFAMILY SSF53850 42 541 7.47E-141 T 15-10-2018 XDD1_0816 05b3d337c259ed18da48fd00c9297483 544 PIRSF PIRSF002741 4 544 4.4E-116 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 XDD1_0816 05b3d337c259ed18da48fd00c9297483 544 Gene3D G3DSA:3.90.76.10 78 201 8.0E-182 T 15-10-2018 XDD1_0816 05b3d337c259ed18da48fd00c9297483 544 Gene3D G3DSA:3.10.105.10 303 514 8.0E-182 T 15-10-2018 XDD1_1132 1ad66301926e4dbe073834b5767997ab 335 Pfam PF00589 Phage integrase family 157 315 1.4E-18 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XDD1_1132 1ad66301926e4dbe073834b5767997ab 335 SUPERFAMILY SSF56349 9 318 3.53E-39 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XDD1_1132 1ad66301926e4dbe073834b5767997ab 335 Gene3D G3DSA:1.10.443.10 111 327 1.9E-27 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XDD1_1132 1ad66301926e4dbe073834b5767997ab 335 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 23 92 5.1E-5 T 15-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 XDD1_1132 1ad66301926e4dbe073834b5767997ab 335 Gene3D G3DSA:1.10.150.130 4 110 2.3E-8 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal XDD1_2972 b523fc0dfd98e80c3dd41cb4a5c07cac 958 SUPERFAMILY SSF53383 465 952 1.55E-99 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_2972 b523fc0dfd98e80c3dd41cb4a5c07cac 958 Gene3D G3DSA:3.90.1150.10 766 896 4.7E-41 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_2972 b523fc0dfd98e80c3dd41cb4a5c07cac 958 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 951 0.0 T 15-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 XDD1_2972 b523fc0dfd98e80c3dd41cb4a5c07cac 958 SUPERFAMILY SSF53383 17 439 3.28E-97 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_2972 b523fc0dfd98e80c3dd41cb4a5c07cac 958 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 957 25.123 T 15-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 XDD1_2972 b523fc0dfd98e80c3dd41cb4a5c07cac 958 Pfam PF02347 Glycine cleavage system P-protein 16 439 9.3E-183 T 15-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 XDD1_2972 b523fc0dfd98e80c3dd41cb4a5c07cac 958 Pfam PF02347 Glycine cleavage system P-protein 461 738 4.4E-10 T 15-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 XDD1_2972 b523fc0dfd98e80c3dd41cb4a5c07cac 958 Gene3D G3DSA:3.40.640.10 525 753 9.3E-64 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_2972 b523fc0dfd98e80c3dd41cb4a5c07cac 958 Gene3D G3DSA:3.40.640.10 96 355 5.4E-100 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_3547 16c3854b078967310ce31162d0c7b046 282 Gene3D G3DSA:3.60.110.10 4 270 1.2E-76 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XDD1_3547 16c3854b078967310ce31162d0c7b046 282 SUPERFAMILY SSF56317 1 266 6.67E-70 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XDD1_3547 16c3854b078967310ce31162d0c7b046 282 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 15-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site XDD1_3547 16c3854b078967310ce31162d0c7b046 282 Pfam PF00795 Carbon-nitrogen hydrolase 6 239 6.5E-46 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 XDD1_3280 8bfe064d4425a4b02b983b1c1bb46a3b 271 PIRSF PIRSF002854 1 271 4.9E-100 T 15-10-2018 IPR004872 Lipoprotein NlpA family XDD1_3280 8bfe064d4425a4b02b983b1c1bb46a3b 271 SUPERFAMILY SSF53850 33 271 5.5E-82 T 15-10-2018 XDD1_3280 8bfe064d4425a4b02b983b1c1bb46a3b 271 Gene3D G3DSA:3.40.190.10 34 265 1.3E-98 T 15-10-2018 XDD1_3280 8bfe064d4425a4b02b983b1c1bb46a3b 271 Pfam PF03180 NLPA lipoprotein 33 271 7.3E-98 T 15-10-2018 IPR004872 Lipoprotein NlpA family XDD1_3280 8bfe064d4425a4b02b983b1c1bb46a3b 271 Gene3D G3DSA:3.40.190.10 115 221 1.3E-98 T 15-10-2018 XDD1_3280 8bfe064d4425a4b02b983b1c1bb46a3b 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 6.8E-138 T 15-10-2018 IPR004872 Lipoprotein NlpA family XDD1_2850 7652c4e2c2e813a3e5419cfec4aee38d 223 Pfam PF05069 Phage virion morphogenesis family 11 79 1.4E-5 T 15-10-2018 IPR006522 Phage virion morphogensis protein XDD1_1026 18cbcb9930aff1fcaa35f5be72a935bf 210 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 3 203 4.2E-78 T 15-10-2018 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68 XDD1_1026 18cbcb9930aff1fcaa35f5be72a935bf 210 SUPERFAMILY SSF56529 2 203 1.57E-49 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 XDD1_1026 18cbcb9930aff1fcaa35f5be72a935bf 210 Gene3D G3DSA:3.90.850.10 1 206 6.5E-52 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 XDD1_1026 18cbcb9930aff1fcaa35f5be72a935bf 210 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 5 203 1.2E-38 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 XDD1_3473 702f79bc4b7022ab7d4bb097ccae7245 165 Gene3D G3DSA:3.10.129.10 10 149 1.9E-20 T 15-10-2018 XDD1_3473 702f79bc4b7022ab7d4bb097ccae7245 165 SUPERFAMILY SSF54637 14 151 1.28E-24 T 15-10-2018 IPR029069 HotDog domain superfamily XDD1_3473 702f79bc4b7022ab7d4bb097ccae7245 165 PIRSF PIRSF020565 2 162 2.3E-43 T 15-10-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted XDD1_3473 702f79bc4b7022ab7d4bb097ccae7245 165 Pfam PF07977 FabA-like domain 17 138 6.9E-5 T 15-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XDD1_3157 bd3c2cdf6bd43f30ce1fe5dea5ef86ee 269 SUPERFAMILY SSF47240 23 267 1.35E-73 T 15-10-2018 IPR009078 Ferritin-like superfamily XDD1_3157 bd3c2cdf6bd43f30ce1fe5dea5ef86ee 269 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 22 264 1.8E-113 T 15-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 XDD1_3157 bd3c2cdf6bd43f30ce1fe5dea5ef86ee 269 Gene3D G3DSA:1.20.1260.10 102 269 1.7E-55 T 15-10-2018 IPR012347 Ferritin-like XDD1_3157 bd3c2cdf6bd43f30ce1fe5dea5ef86ee 269 Gene3D G3DSA:1.20.1260.10 19 88 1.8E-16 T 15-10-2018 IPR012347 Ferritin-like XDD1_3157 bd3c2cdf6bd43f30ce1fe5dea5ef86ee 269 PIRSF PIRSF020736 14 269 1.6E-91 T 15-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 XDD1_3914 95522573ab2fc231844025735ca20283 159 SUPERFAMILY SSF141452 4 158 2.48E-34 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_3914 95522573ab2fc231844025735ca20283 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 156 9.4E-59 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_3914 95522573ab2fc231844025735ca20283 159 Pfam PF05638 Type VI secretion system effector, Hcp 7 143 3.5E-23 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_3914 95522573ab2fc231844025735ca20283 159 Gene3D G3DSA:2.30.110.20 2 158 3.1E-52 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_3073 90542e134879c15685e2e057f15401bd 405 SUPERFAMILY SSF56349 104 376 2.85E-44 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XDD1_3073 90542e134879c15685e2e057f15401bd 405 Gene3D G3DSA:1.10.443.10 211 385 3.3E-22 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XDD1_3073 90542e134879c15685e2e057f15401bd 405 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 105 151 1.3E-5 T 15-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 XDD1_3073 90542e134879c15685e2e057f15401bd 405 Pfam PF00589 Phage integrase family 211 372 3.4E-16 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XDD1_3073 90542e134879c15685e2e057f15401bd 405 Pfam PF13356 Arm DNA-binding domain 8 91 5.8E-13 T 15-10-2018 IPR025166 Integrase, DNA-binding domain XDD1_3073 90542e134879c15685e2e057f15401bd 405 Gene3D G3DSA:1.10.150.130 103 210 3.2E-12 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal XDD1_3073 90542e134879c15685e2e057f15401bd 405 Gene3D G3DSA:3.30.160.390 6 94 3.8E-20 T 15-10-2018 IPR038488 Integrase, DNA-binding domain superfamily XDD1_2903 b527dbe3f116af8fe970bc747774be6b 1234 Gene3D G3DSA:1.20.120.20 967 1096 5.4E-6 T 15-10-2018 XDD1_1129 96e652dbe8d8b1cbff1ec41f426ea19a 307 Gene3D G3DSA:1.10.3530.10 30 207 3.1E-96 T 15-10-2018 IPR023136 Api92-like domain superfamily XDD1_1129 96e652dbe8d8b1cbff1ec41f426ea19a 307 Pfam PF06924 Protein of unknown function (DUF1281) 9 140 1.0E-53 T 15-10-2018 IPR009694 Protein of unknown function DUF1281 XDD1_1129 96e652dbe8d8b1cbff1ec41f426ea19a 307 Gene3D G3DSA:3.30.70.1270 4 270 3.1E-96 T 15-10-2018 XDD1_1129 96e652dbe8d8b1cbff1ec41f426ea19a 307 SUPERFAMILY SSF160940 3 276 1.12E-118 T 15-10-2018 XDD1_3936 a48d044bd68a5dc33ccb7261f017e717 342 Gene3D G3DSA:3.10.310.50 48 199 1.9E-44 T 15-10-2018 XDD1_3936 a48d044bd68a5dc33ccb7261f017e717 342 Pfam PF04536 TPM domain 65 187 1.1E-35 T 15-10-2018 IPR007621 TPM domain XDD1_2889 2acd58f679060553ae914a5396f635df 184 Pfam PF01292 Prokaryotic cytochrome b561 10 180 5.4E-23 T 15-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 XDD1_2889 2acd58f679060553ae914a5396f635df 184 SUPERFAMILY SSF81342 5 182 1.65E-33 T 15-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 XDD1_2496 da00478a1a861a19dc5fab8e98c27d70 261 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 XDD1_2496 da00478a1a861a19dc5fab8e98c27d70 261 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 XDD1_2496 da00478a1a861a19dc5fab8e98c27d70 261 SUPERFAMILY SSF51556 1 258 3.32E-89 T 15-10-2018 IPR032466 Metal-dependent hydrolase XDD1_2496 da00478a1a861a19dc5fab8e98c27d70 261 PIRSF PIRSF005902 1 259 1.1E-77 T 15-10-2018 IPR001130 TatD family GO:0016788 XDD1_2496 da00478a1a861a19dc5fab8e98c27d70 261 Gene3D G3DSA:3.20.20.140 1 260 2.7E-102 T 15-10-2018 XDD1_2496 da00478a1a861a19dc5fab8e98c27d70 261 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 XDD1_2496 da00478a1a861a19dc5fab8e98c27d70 261 Pfam PF01026 TatD related DNase 4 255 4.0E-79 T 15-10-2018 IPR001130 TatD family GO:0016788 XDD1_2496 da00478a1a861a19dc5fab8e98c27d70 261 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 8.0E-95 T 15-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 XDD1_3813 82de3525e06da69b220bdfc53f3d4f6f 221 SUPERFAMILY SSF46689 17 131 1.08E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3813 82de3525e06da69b220bdfc53f3d4f6f 221 Pfam PF13551 Winged helix-turn helix 32 88 8.6E-9 T 15-10-2018 XDD1_3813 82de3525e06da69b220bdfc53f3d4f6f 221 Pfam PF13592 Winged helix-turn helix 100 155 1.6E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_2753 36f67691866442da773bfaebe0ee4581 100 Gene3D G3DSA:1.10.3230.30 2 98 1.1E-12 T 15-10-2018 XDD1_2753 36f67691866442da773bfaebe0ee4581 100 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 8 98 5.1E-21 T 15-10-2018 IPR006450 Phage protein of unkonwn function XDD1_2753 36f67691866442da773bfaebe0ee4581 100 Pfam PF05135 Phage gp6-like head-tail connector protein 8 95 5.6E-15 T 15-10-2018 IPR021146 Phage gp6-like head-tail connector protein XDD1_3186 eea715484c48b02784cf524601637312 203 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 4.2E-13 T 15-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal XDD1_3186 eea715484c48b02784cf524601637312 203 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 198 2.7E-75 T 15-10-2018 IPR015796 Impact family, bacterial/archaeal XDD1_3186 eea715484c48b02784cf524601637312 203 Gene3D G3DSA:3.30.230.30 1 134 2.3E-50 T 15-10-2018 IPR036956 Impact, N-terminal domain superfamily XDD1_3186 eea715484c48b02784cf524601637312 203 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 2.8E-25 T 15-10-2018 IPR001498 Impact, N-terminal XDD1_3186 eea715484c48b02784cf524601637312 203 SUPERFAMILY SSF54980 136 200 1.51E-15 T 15-10-2018 IPR035647 EF-G domain III/V-like XDD1_3186 eea715484c48b02784cf524601637312 203 SUPERFAMILY SSF54211 2 130 3.53E-41 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_3186 eea715484c48b02784cf524601637312 203 Gene3D G3DSA:3.30.70.240 135 202 1.8E-27 T 15-10-2018 XDD1_3932 5637456d83e8503c33f81371e58eb60b 416 Pfam PF07804 HipA-like C-terminal domain 182 388 3.8E-50 T 15-10-2018 IPR012893 HipA-like, C-terminal XDD1_2967 5326c8237e0b270e8b128228608c14a4 398 Pfam PF07690 Major Facilitator Superfamily 15 354 3.4E-37 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_2967 5326c8237e0b270e8b128228608c14a4 398 Gene3D G3DSA:1.20.1720.10 11 388 1.2E-72 T 15-10-2018 XDD1_2967 5326c8237e0b270e8b128228608c14a4 398 SUPERFAMILY SSF103473 9 389 1.7E-47 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1869 01248ad2dafb98415528d9fcbc32d1f6 262 SUPERFAMILY SSF51735 6 253 6.15E-60 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_1869 01248ad2dafb98415528d9fcbc32d1f6 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.4E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_1869 01248ad2dafb98415528d9fcbc32d1f6 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 9.4E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_1869 01248ad2dafb98415528d9fcbc32d1f6 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 9.4E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XDD1_1869 01248ad2dafb98415528d9fcbc32d1f6 262 Gene3D G3DSA:3.40.50.720 1 262 5.7E-60 T 15-10-2018 XDD1_1869 01248ad2dafb98415528d9fcbc32d1f6 262 PIRSF PIRSF000094 1 260 1.5E-122 T 15-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XDD1_1869 01248ad2dafb98415528d9fcbc32d1f6 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 8.2E-83 T 15-10-2018 XDD1_3688 73727eae7c0c42f248f9948f13809bbc 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 311 2.0E-45 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 XDD1_3866 b69c40ec9d417740595b3013f60da728 75 Pfam PF04023 FeoA domain 8 64 2.8E-7 T 15-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 XDD1_3866 b69c40ec9d417740595b3013f60da728 75 SUPERFAMILY SSF50037 6 70 2.75E-15 T 15-10-2018 IPR008988 Transcriptional repressor, C-terminal XDD1_3866 b69c40ec9d417740595b3013f60da728 75 SMART SM00899 1 72 2.8E-9 T 15-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 XDD1_3866 b69c40ec9d417740595b3013f60da728 75 Gene3D G3DSA:2.30.30.90 1 74 5.1E-28 T 15-10-2018 IPR038157 Ferrous iron transporter, core domain XDD1_0420 7d047e32f048ede5620e81830d14959a 100 SUPERFAMILY SSF50182 7 69 3.85E-24 T 15-10-2018 IPR010920 LSM domain superfamily XDD1_0420 7d047e32f048ede5620e81830d14959a 100 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 1.9E-29 T 15-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 XDD1_0420 7d047e32f048ede5620e81830d14959a 100 Gene3D G3DSA:2.30.30.100 1 72 1.1E-34 T 15-10-2018 XDD1_0420 7d047e32f048ede5620e81830d14959a 100 Pfam PF17209 Hfq protein 7 69 4.6E-31 T 15-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 XDD1_0420 7d047e32f048ede5620e81830d14959a 100 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.396 T 15-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 XDD1_2312 5a38dc8d50df0404472ff0a4c782c988 234 Pfam PF02108 Flagellar assembly protein FliH 101 224 3.6E-39 T 15-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE XDD1_2312 5a38dc8d50df0404472ff0a4c782c988 234 PRINTS PR01003 Flagellar assembly protein FliH signature 101 120 7.6E-63 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 XDD1_2312 5a38dc8d50df0404472ff0a4c782c988 234 PRINTS PR01003 Flagellar assembly protein FliH signature 82 100 7.6E-63 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 XDD1_2312 5a38dc8d50df0404472ff0a4c782c988 234 PRINTS PR01003 Flagellar assembly protein FliH signature 139 161 7.6E-63 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 XDD1_2312 5a38dc8d50df0404472ff0a4c782c988 234 PRINTS PR01003 Flagellar assembly protein FliH signature 59 81 7.6E-63 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 XDD1_2312 5a38dc8d50df0404472ff0a4c782c988 234 PRINTS PR01003 Flagellar assembly protein FliH signature 121 138 7.6E-63 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 XDD1_2312 5a38dc8d50df0404472ff0a4c782c988 234 PRINTS PR01003 Flagellar assembly protein FliH signature 207 232 7.6E-63 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 XDD1_2312 5a38dc8d50df0404472ff0a4c782c988 234 PRINTS PR01003 Flagellar assembly protein FliH signature 162 189 7.6E-63 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 XDD1_2312 5a38dc8d50df0404472ff0a4c782c988 234 PRINTS PR01003 Flagellar assembly protein FliH signature 190 206 7.6E-63 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 XDD1_0511 c63be448c1a96d5908eb5be48fb91336 313 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 3.3E-118 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XDD1_0511 c63be448c1a96d5908eb5be48fb91336 313 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 1.3E-26 T 15-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 XDD1_0511 c63be448c1a96d5908eb5be48fb91336 313 Gene3D G3DSA:3.40.50.1370 8 304 4.6E-122 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XDD1_0511 c63be448c1a96d5908eb5be48fb91336 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.7E-36 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XDD1_0511 c63be448c1a96d5908eb5be48fb91336 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.7E-36 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XDD1_0511 c63be448c1a96d5908eb5be48fb91336 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.7E-36 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XDD1_0511 c63be448c1a96d5908eb5be48fb91336 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.7E-36 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XDD1_0511 c63be448c1a96d5908eb5be48fb91336 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.7E-36 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XDD1_0511 c63be448c1a96d5908eb5be48fb91336 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.7E-36 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XDD1_0511 c63be448c1a96d5908eb5be48fb91336 313 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.113 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XDD1_0511 c63be448c1a96d5908eb5be48fb91336 313 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 3.2E-47 T 15-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 XDD1_0511 c63be448c1a96d5908eb5be48fb91336 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.9E-25 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XDD1_0511 c63be448c1a96d5908eb5be48fb91336 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 2.9E-25 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XDD1_0511 c63be448c1a96d5908eb5be48fb91336 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 2.9E-25 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XDD1_0511 c63be448c1a96d5908eb5be48fb91336 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 2.9E-25 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XDD1_0511 c63be448c1a96d5908eb5be48fb91336 313 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XDD1_0511 c63be448c1a96d5908eb5be48fb91336 313 SUPERFAMILY SSF53671 4 306 4.52E-98 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XDD1_0511 c63be448c1a96d5908eb5be48fb91336 313 Gene3D G3DSA:3.40.50.1370 135 292 4.6E-122 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XDD1_3833 58956171b915e78136ffd9ce11ec8cce 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 1.6E-32 T 15-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 XDD1_3833 58956171b915e78136ffd9ce11ec8cce 469 Gene3D G3DSA:3.30.590.10 105 457 5.2E-148 T 15-10-2018 XDD1_3833 58956171b915e78136ffd9ce11ec8cce 469 Gene3D G3DSA:3.10.20.70 2 104 7.1E-43 T 15-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XDD1_3833 58956171b915e78136ffd9ce11ec8cce 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 5.0E-212 T 15-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XDD1_3833 58956171b915e78136ffd9ce11ec8cce 469 SUPERFAMILY SSF54368 3 100 4.45E-38 T 15-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XDD1_3833 58956171b915e78136ffd9ce11ec8cce 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 15-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 XDD1_3833 58956171b915e78136ffd9ce11ec8cce 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 15-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 XDD1_3833 58956171b915e78136ffd9ce11ec8cce 469 SMART SM01230 102 379 1.8E-152 T 15-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XDD1_3833 58956171b915e78136ffd9ce11ec8cce 469 SUPERFAMILY SSF55931 103 468 1.08E-137 T 15-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 XDD1_3833 58956171b915e78136ffd9ce11ec8cce 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 8.2E-136 T 15-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XDD1_3833 58956171b915e78136ffd9ce11ec8cce 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 15-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XDD1_3861 0b161b8017461ffcdeba67831403452b 350 Pfam PF00899 ThiF family 109 324 2.5E-42 T 15-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 XDD1_3861 0b161b8017461ffcdeba67831403452b 350 Gene3D G3DSA:3.40.50.720 96 347 1.3E-75 T 15-10-2018 XDD1_3861 0b161b8017461ffcdeba67831403452b 350 SUPERFAMILY SSF69572 90 325 8.76E-53 T 15-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 XDD1_1672 d524b188b9c4a5cc9a21156fa7ff97f6 122 SUPERFAMILY SSF81324 13 100 1.19E-6 T 15-10-2018 XDD1_1256 867121ed4bd67ff8b7433cd36ea14e75 400 SUPERFAMILY SSF52540 43 271 1.2E-74 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1256 867121ed4bd67ff8b7433cd36ea14e75 400 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_1256 867121ed4bd67ff8b7433cd36ea14e75 400 SMART SM00382 53 242 6.8E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1256 867121ed4bd67ff8b7433cd36ea14e75 400 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 394 2.9E-163 T 15-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 XDD1_1256 867121ed4bd67ff8b7433cd36ea14e75 400 Gene3D G3DSA:3.10.580.10 296 395 1.6E-8 T 15-10-2018 XDD1_1256 867121ed4bd67ff8b7433cd36ea14e75 400 Pfam PF00571 CBS domain 345 393 5.1E-4 T 15-10-2018 IPR000644 CBS domain XDD1_1256 867121ed4bd67ff8b7433cd36ea14e75 400 Gene3D G3DSA:3.40.50.300 27 295 2.4E-78 T 15-10-2018 XDD1_1256 867121ed4bd67ff8b7433cd36ea14e75 400 SUPERFAMILY SSF54631 276 398 4.19E-11 T 15-10-2018 XDD1_1256 867121ed4bd67ff8b7433cd36ea14e75 400 Pfam PF00005 ABC transporter 45 192 7.4E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1451 985122a9366f7a5144b839602f3a9124 69 Pfam PF12571 Phage tail-collar fibre protein 28 64 2.3E-7 T 15-10-2018 IPR022225 Phage tail fibre protein XDD1_3613 268ba4dfa2aaef552267a21ea050b34d 354 Gene3D G3DSA:3.20.20.210 1 354 2.7E-161 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XDD1_3613 268ba4dfa2aaef552267a21ea050b34d 354 SUPERFAMILY SSF51726 2 353 2.96E-124 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XDD1_3613 268ba4dfa2aaef552267a21ea050b34d 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 5.5E-137 T 15-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XDD1_3613 268ba4dfa2aaef552267a21ea050b34d 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 15-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XDD1_3613 268ba4dfa2aaef552267a21ea050b34d 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.491 T 15-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XDD1_3613 268ba4dfa2aaef552267a21ea050b34d 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 15-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XDD1_3613 268ba4dfa2aaef552267a21ea050b34d 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 1.7E-142 T 15-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XDD1_2284 c421aa1b651e973a12bd48fb3b0e5c8e 559 Gene3D G3DSA:3.40.640.10 137 402 8.1E-105 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_2284 c421aa1b651e973a12bd48fb3b0e5c8e 559 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 100 457 1.4E-47 T 15-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 XDD1_2284 c421aa1b651e973a12bd48fb3b0e5c8e 559 Gene3D G3DSA:3.90.1150.170 73 538 8.1E-105 T 15-10-2018 XDD1_2284 c421aa1b651e973a12bd48fb3b0e5c8e 559 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 32 542 2.6E-230 T 15-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 XDD1_2284 c421aa1b651e973a12bd48fb3b0e5c8e 559 SUPERFAMILY SSF53383 78 544 3.93E-108 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_2026 9ad0ca0bbc99d56df9498636ef129413 400 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 400 39.145 T 15-10-2018 IPR022855 Multidrug resistance protein MdtH XDD1_2026 9ad0ca0bbc99d56df9498636ef129413 400 Pfam PF07690 Major Facilitator Superfamily 20 235 8.9E-25 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_2026 9ad0ca0bbc99d56df9498636ef129413 400 Gene3D G3DSA:1.20.1250.20 12 386 1.3E-47 T 15-10-2018 XDD1_2026 9ad0ca0bbc99d56df9498636ef129413 400 SUPERFAMILY SSF103473 13 392 1.83E-53 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_3252 31b7296525af38c95b48a64db50ff0f5 405 Gene3D G3DSA:3.30.160.390 6 104 7.7E-21 T 15-10-2018 IPR038488 Integrase, DNA-binding domain superfamily XDD1_3252 31b7296525af38c95b48a64db50ff0f5 405 Gene3D G3DSA:1.10.150.130 105 210 3.0E-11 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal XDD1_3252 31b7296525af38c95b48a64db50ff0f5 405 Gene3D G3DSA:1.10.443.10 211 385 1.0E-18 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XDD1_3252 31b7296525af38c95b48a64db50ff0f5 405 Pfam PF00589 Phage integrase family 211 372 1.2E-15 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XDD1_3252 31b7296525af38c95b48a64db50ff0f5 405 Pfam PF13356 Arm DNA-binding domain 8 91 1.3E-13 T 15-10-2018 IPR025166 Integrase, DNA-binding domain XDD1_3252 31b7296525af38c95b48a64db50ff0f5 405 SUPERFAMILY SSF56349 104 376 1.85E-40 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XDD1_3663 d88f38075f10c16dd4b783f8e7c5ec84 480 Pfam PF00367 phosphotransferase system, EIIB 11 43 5.0E-13 T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 XDD1_3663 d88f38075f10c16dd4b783f8e7c5ec84 480 Gene3D G3DSA:3.30.1360.60 2 78 2.2E-18 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 XDD1_3663 d88f38075f10c16dd4b783f8e7c5ec84 480 Pfam PF02378 Phosphotransferase system, EIIC 125 407 1.6E-30 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 XDD1_3663 d88f38075f10c16dd4b783f8e7c5ec84 480 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 XDD1_3663 d88f38075f10c16dd4b783f8e7c5ec84 480 SUPERFAMILY SSF55604 8 75 1.1E-17 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 XDD1_2041 6f8c080eae5092a37e83ba99f816bad2 448 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 441 4.3E-149 T 15-10-2018 IPR010263 Type VI secretion protein, VC_A0114 XDD1_2041 6f8c080eae5092a37e83ba99f816bad2 448 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 1.9E-139 T 15-10-2018 IPR010263 Type VI secretion protein, VC_A0114 XDD1_2328 ea893c59b7feba55623d5b39c3b29732 153 Pfam PF12728 Helix-turn-helix domain 84 132 1.0E-13 T 15-10-2018 XDD1_2328 ea893c59b7feba55623d5b39c3b29732 153 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 84 130 1.4E-18 T 15-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 XDD1_2328 ea893c59b7feba55623d5b39c3b29732 153 SUPERFAMILY SSF46955 84 132 3.3E-5 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily XDD1_0369 0800bec6b9febe0e0bc9d31f9b9e1c3c 239 Gene3D G3DSA:3.30.450.40 53 237 4.4E-34 T 15-10-2018 IPR029016 GAF-like domain superfamily XDD1_0369 0800bec6b9febe0e0bc9d31f9b9e1c3c 239 Pfam PF04340 Protein of unknown function, DUF484 17 236 3.8E-63 T 15-10-2018 IPR007435 Protein of unknown function DUF484 XDD1_1833 4f5506f960cdd96d272f4bbbeaae9870 340 Pfam PF00589 Phage integrase family 127 299 1.7E-41 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XDD1_1833 4f5506f960cdd96d272f4bbbeaae9870 340 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 12 103 2.7E-6 T 15-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 XDD1_1833 4f5506f960cdd96d272f4bbbeaae9870 340 Gene3D G3DSA:1.10.150.130 7 122 2.9E-18 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal XDD1_1833 4f5506f960cdd96d272f4bbbeaae9870 340 Gene3D G3DSA:1.10.443.10 125 308 1.1E-53 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XDD1_1833 4f5506f960cdd96d272f4bbbeaae9870 340 SUPERFAMILY SSF56349 11 306 1.44E-54 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XDD1_1819 4f5506f960cdd96d272f4bbbeaae9870 340 Pfam PF00589 Phage integrase family 127 299 1.7E-41 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XDD1_1819 4f5506f960cdd96d272f4bbbeaae9870 340 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 12 103 2.7E-6 T 15-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 XDD1_1819 4f5506f960cdd96d272f4bbbeaae9870 340 Gene3D G3DSA:1.10.150.130 7 122 2.9E-18 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal XDD1_1819 4f5506f960cdd96d272f4bbbeaae9870 340 Gene3D G3DSA:1.10.443.10 125 308 1.1E-53 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XDD1_1819 4f5506f960cdd96d272f4bbbeaae9870 340 SUPERFAMILY SSF56349 11 306 1.44E-54 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XDD1_3926 31bc999dfd1a36695b5b420245437d6c 150 Gene3D G3DSA:3.10.129.10 7 150 1.0E-56 T 15-10-2018 XDD1_3926 31bc999dfd1a36695b5b420245437d6c 150 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 27 139 4.3E-46 T 15-10-2018 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 XDD1_3926 31bc999dfd1a36695b5b420245437d6c 150 SUPERFAMILY SSF54637 13 141 9.49E-33 T 15-10-2018 IPR029069 HotDog domain superfamily XDD1_3926 31bc999dfd1a36695b5b420245437d6c 150 Pfam PF03061 Thioesterase superfamily 56 128 4.6E-18 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 XDD1_3926 31bc999dfd1a36695b5b420245437d6c 150 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 137 4.3E-30 T 15-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 XDD1_0314 8bc7024a4b18592aafb67721c0ee4c1e 362 Gene3D G3DSA:1.10.10.10 290 360 4.9E-5 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0314 8bc7024a4b18592aafb67721c0ee4c1e 362 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 64 281 8.2E-81 T 15-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 XDD1_0314 8bc7024a4b18592aafb67721c0ee4c1e 362 Pfam PF02481 DNA recombination-mediator protein A 68 273 5.7E-76 T 15-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 XDD1_0314 8bc7024a4b18592aafb67721c0ee4c1e 362 Gene3D G3DSA:3.40.50.450 8 287 1.2E-91 T 15-10-2018 XDD1_0314 8bc7024a4b18592aafb67721c0ee4c1e 362 SUPERFAMILY SSF102405 76 282 8.01E-41 T 15-10-2018 XDD1_1963 babdcb5ec4dbf8c75e19e9f8f3a2d269 593 Pfam PF06276 Ferric iron reductase FhuF-like transporter 415 575 2.7E-32 T 15-10-2018 IPR022770 Ferric iron reductase FhuF domain XDD1_1963 babdcb5ec4dbf8c75e19e9f8f3a2d269 593 Pfam PF04183 IucA / IucC family 157 384 1.1E-39 T 15-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 XDD1_1963 babdcb5ec4dbf8c75e19e9f8f3a2d269 593 Gene3D G3DSA:1.10.150.640 13 141 3.3E-34 T 15-10-2018 XDD1_1963 babdcb5ec4dbf8c75e19e9f8f3a2d269 593 Gene3D G3DSA:1.10.340.60 471 554 1.8E-20 T 15-10-2018 XDD1_1963 babdcb5ec4dbf8c75e19e9f8f3a2d269 593 Gene3D G3DSA:1.10.340.60 408 442 8.4E-8 T 15-10-2018 XDD1_1963 babdcb5ec4dbf8c75e19e9f8f3a2d269 593 Gene3D G3DSA:3.10.450.440 35 102 3.3E-34 T 15-10-2018 XDD1_1086 99d5c3685bbab8387d741dfb05f838c0 252 Pfam PF14348 Domain of unknown function (DUF4400) 54 249 1.2E-72 T 15-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type XDD1_1086 99d5c3685bbab8387d741dfb05f838c0 252 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 18 252 3.8E-93 T 15-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 Gene3D G3DSA:3.90.930.1 657 798 7.6E-14 T 15-10-2018 XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 Gene3D G3DSA:3.90.930.1 865 1009 1.9E-6 T 15-10-2018 XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 Pfam PF14436 Bacterial EndoU nuclease 1442 1583 1.9E-23 T 15-10-2018 IPR029501 Bacterial EndoU nuclease XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 Gene3D G3DSA:2.180.10.10 1142 1431 1.1E-36 T 15-10-2018 XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 Pfam PF05593 RHS Repeat 804 838 2.4E-5 T 15-10-2018 IPR031325 RHS repeat XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 Pfam PF05593 RHS Repeat 690 725 2.4E-12 T 15-10-2018 IPR031325 RHS repeat XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 Pfam PF05593 RHS Repeat 827 859 2.5E-6 T 15-10-2018 IPR031325 RHS repeat XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 Pfam PF05593 RHS Repeat 1186 1219 4.1E-5 T 15-10-2018 IPR031325 RHS repeat XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 Pfam PF05593 RHS Repeat 864 901 1.4E-5 T 15-10-2018 IPR031325 RHS repeat XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 843 884 1.9E-4 T 15-10-2018 IPR006530 YD repeat XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1211 1241 1.6E-6 T 15-10-2018 IPR006530 YD repeat XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 607 646 0.001 T 15-10-2018 IPR006530 YD repeat XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 669 710 8.4E-8 T 15-10-2018 IPR006530 YD repeat XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 886 926 5.4E-6 T 15-10-2018 IPR006530 YD repeat XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 564 597 1.7E-4 T 15-10-2018 IPR006530 YD repeat XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 711 752 6.9E-7 T 15-10-2018 IPR006530 YD repeat XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 753 793 4.6E-5 T 15-10-2018 IPR006530 YD repeat XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 809 842 1.9E-4 T 15-10-2018 IPR006530 YD repeat XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 Pfam PF03527 RHS protein 1322 1356 1.1E-6 T 15-10-2018 IPR001826 RHS protein XDD1_3710 f3f47e0e475f0d3f9799e60c0d14b310 1587 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1350 1431 2.4E-22 T 15-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 XDD1_3884 8387669221860ed91b678db95120165b 157 SUPERFAMILY SSF46689 19 132 5.2E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3884 8387669221860ed91b678db95120165b 157 Pfam PF13551 Winged helix-turn helix 30 90 2.4E-11 T 15-10-2018 XDD1_0666 e988c1419b2b02de80ae368dbc309526 163 Gene3D G3DSA:3.40.50.10110 1 159 1.2E-47 T 15-10-2018 IPR036768 DNA polymerase III subunit chi superfamily XDD1_0666 e988c1419b2b02de80ae368dbc309526 163 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 156 8.0E-40 T 15-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 XDD1_0666 e988c1419b2b02de80ae368dbc309526 163 SUPERFAMILY SSF102400 1 157 4.58E-45 T 15-10-2018 IPR036768 DNA polymerase III subunit chi superfamily XDD1_3165 83edba9438cb39a9f9b56eaecbe24e50 106 Pfam PF04977 Septum formation initiator 20 98 1.5E-28 T 15-10-2018 IPR007060 Septum formation initiator FtsL/DivIC XDD1_3165 83edba9438cb39a9f9b56eaecbe24e50 106 Gene3D G3DSA:1.20.5.400 30 72 1.4E-10 T 15-10-2018 XDD1_3165 83edba9438cb39a9f9b56eaecbe24e50 106 Hamap MF_00599 Cell division protein FtsB [ftsB]. 10 99 33.273 T 15-10-2018 IPR023081 Cell division protein FtsB XDD1_2848 4d602abc9f46ab19a9d2fc914273417a 151 Pfam PF10772 Protein of unknown function (DUF2597) 8 141 2.1E-61 T 15-10-2018 IPR019708 Bacteriophage HP1, Orf24 XDD1_3436 4d602abc9f46ab19a9d2fc914273417a 151 Pfam PF10772 Protein of unknown function (DUF2597) 8 141 2.1E-61 T 15-10-2018 IPR019708 Bacteriophage HP1, Orf24 XDD1_3886 f62c597fdf296c8768021da45af8a46b 432 Gene3D G3DSA:3.90.1150.10 30 425 6.4E-166 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_3886 f62c597fdf296c8768021da45af8a46b 432 Pfam PF12897 Alanine-glyoxylate amino-transferase 19 429 9.2E-154 T 15-10-2018 IPR024551 Aminotransferase, putative XDD1_3886 f62c597fdf296c8768021da45af8a46b 432 SUPERFAMILY SSF53383 58 421 4.34E-43 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_3886 f62c597fdf296c8768021da45af8a46b 432 Gene3D G3DSA:3.40.640.10 67 311 6.4E-166 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_3070 7096188a1866f54dcae791584bf30f51 182 SUPERFAMILY SSF52499 2 176 6.54E-49 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 XDD1_3070 7096188a1866f54dcae791584bf30f51 182 Gene3D G3DSA:3.40.50.850 1 177 9.1E-50 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 XDD1_3070 7096188a1866f54dcae791584bf30f51 182 Pfam PF00857 Isochorismatase family 3 174 8.4E-37 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 XDD1_0683 fc61fb56534f12099982c2a6795d35fe 466 Pfam PF01139 tRNA-splicing ligase RtcB 67 465 4.6E-98 T 15-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 XDD1_0683 fc61fb56534f12099982c2a6795d35fe 466 SUPERFAMILY SSF103365 32 466 7.32E-104 T 15-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 XDD1_0683 fc61fb56534f12099982c2a6795d35fe 466 Gene3D G3DSA:3.90.1860.10 17 466 2.8E-106 T 15-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 XDD1_2045 f5c57a779f0c794e7490b09f17849f03 224 Pfam PF12059 Protein of unknown function (DUF3540) 53 224 7.4E-58 T 15-10-2018 IPR021927 Protein of unknown function DUF3540 XDD1_3204 7c7fda31e2dfff0d5427c83e6fb27688 461 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 8 461 1.1E-95 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 XDD1_3204 7c7fda31e2dfff0d5427c83e6fb27688 461 Pfam PF02447 GntP family permease 6 460 2.9E-134 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 XDD1_3204 7c7fda31e2dfff0d5427c83e6fb27688 461 PIRSF PIRSF002746 1 461 9.5E-143 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 XDD1_1848 7034b3bddf2c943c520ef3279a6abc66 325 Pfam PF03734 L,D-transpeptidase catalytic domain 102 237 3.3E-18 T 15-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 XDD1_1848 7034b3bddf2c943c520ef3279a6abc66 325 Gene3D G3DSA:2.40.440.10 25 308 5.7E-83 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like XDD1_1848 7034b3bddf2c943c520ef3279a6abc66 325 SUPERFAMILY SSF141523 96 238 1.44E-28 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like XDD1_1466 75348e5b9d57b641de79a311e81b76ea 154 Pfam PF02391 MoaE protein 8 121 1.1E-36 T 15-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 XDD1_1466 75348e5b9d57b641de79a311e81b76ea 154 Gene3D G3DSA:3.90.1170.40 1 150 1.1E-56 T 15-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 XDD1_1466 75348e5b9d57b641de79a311e81b76ea 154 SUPERFAMILY SSF54690 5 150 8.11E-54 T 15-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 XDD1_0863 96f4e1970352ad02e2d04129add87652 455 Pfam PF07690 Major Facilitator Superfamily 20 354 3.2E-41 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0863 96f4e1970352ad02e2d04129add87652 455 SUPERFAMILY SSF103473 12 391 1.57E-63 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0863 96f4e1970352ad02e2d04129add87652 455 Gene3D G3DSA:1.20.1250.20 3 389 2.8E-100 T 15-10-2018 XDD1_0863 96f4e1970352ad02e2d04129add87652 455 Gene3D G3DSA:3.30.70.100 390 453 3.6E-24 T 15-10-2018 XDD1_3620 0cd3c4e79d65acf4f54bad2928ad2823 378 Pfam PF04055 Radical SAM superfamily 88 227 4.7E-9 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XDD1_3620 0cd3c4e79d65acf4f54bad2928ad2823 378 SUPERFAMILY SSF102114 41 353 2.62E-54 T 15-10-2018 XDD1_3620 0cd3c4e79d65acf4f54bad2928ad2823 378 SMART SM00876 264 367 2.0E-31 T 15-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XDD1_3620 0cd3c4e79d65acf4f54bad2928ad2823 378 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 10 374 1.2E-162 T 15-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 XDD1_3620 0cd3c4e79d65acf4f54bad2928ad2823 378 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 264 366 2.5E-21 T 15-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XDD1_3620 0cd3c4e79d65acf4f54bad2928ad2823 378 Gene3D G3DSA:3.20.20.70 17 371 5.7E-103 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_3031 f77ea5ba64896c4d30e7ed3447d3e15f 600 Gene3D G3DSA:3.40.50.12780 2 326 8.3E-53 T 15-10-2018 XDD1_3031 f77ea5ba64896c4d30e7ed3447d3e15f 600 Pfam PF00501 AMP-binding enzyme 15 469 2.5E-93 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_3031 f77ea5ba64896c4d30e7ed3447d3e15f 600 Gene3D G3DSA:3.40.50.12780 327 462 1.3E-34 T 15-10-2018 XDD1_3031 f77ea5ba64896c4d30e7ed3447d3e15f 600 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_3031 f77ea5ba64896c4d30e7ed3447d3e15f 600 SUPERFAMILY SSF56801 9 598 1.01E-113 T 15-10-2018 XDD1_2582 fc5bd1a5228a8a92a3369da6ace03c9d 664 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 57 504 8.0E-161 T 15-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 XDD1_2582 fc5bd1a5228a8a92a3369da6ace03c9d 664 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 19 502 2.2E-191 T 15-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 XDD1_2582 fc5bd1a5228a8a92a3369da6ace03c9d 664 ProSitePatterns PS01303 BCCT family of transporters signature. 321 330 - T 15-10-2018 IPR018093 BCCT transporter, conserved site XDD1_0035 df8c6ef440787a7de4b380e43908b8cf 287 Gene3D G3DSA:3.40.1380.10 61 206 3.3E-112 T 15-10-2018 XDD1_0035 df8c6ef440787a7de4b380e43908b8cf 287 Gene3D G3DSA:1.10.287.80 6 283 3.3E-112 T 15-10-2018 XDD1_0035 df8c6ef440787a7de4b380e43908b8cf 287 Pfam PF00231 ATP synthase 5 286 3.2E-96 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0035 df8c6ef440787a7de4b380e43908b8cf 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 1.3E-110 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0035 df8c6ef440787a7de4b380e43908b8cf 287 SUPERFAMILY SSF52943 2 287 5.69E-96 T 15-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0035 df8c6ef440787a7de4b380e43908b8cf 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.9E-37 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0035 df8c6ef440787a7de4b380e43908b8cf 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.9E-37 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0035 df8c6ef440787a7de4b380e43908b8cf 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 1.9E-37 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0035 df8c6ef440787a7de4b380e43908b8cf 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 1.9E-37 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0035 df8c6ef440787a7de4b380e43908b8cf 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 15-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0035 df8c6ef440787a7de4b380e43908b8cf 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.192 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XDD1_0083 84a7d65741f2b067d34db2b0ad161e9e 312 SUPERFAMILY SSF55729 6 151 3.6E-18 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_0083 84a7d65741f2b067d34db2b0ad161e9e 312 Pfam PF00583 Acetyltransferase (GNAT) family 54 118 1.5E-7 T 15-10-2018 IPR000182 GNAT domain XDD1_0083 84a7d65741f2b067d34db2b0ad161e9e 312 Gene3D G3DSA:3.40.630.30 4 147 6.6E-14 T 15-10-2018 XDD1_1371 c51a362dfa2f48dfd9ec322abf300b2e 127 Gene3D G3DSA:3.10.180.10 1 115 9.5E-13 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XDD1_1371 c51a362dfa2f48dfd9ec322abf300b2e 127 SUPERFAMILY SSF54593 1 112 4.97E-19 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XDD1_1044 e648527f962cee28f67febf1d1b2599b 426 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 12 399 1.3E-23 T 15-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 XDD1_1044 e648527f962cee28f67febf1d1b2599b 426 Gene3D G3DSA:1.10.4160.10 10 425 2.6E-46 T 15-10-2018 IPR038271 Purine-cytosine permease superfamily XDD1_2098 f91107b0139642c541d6c37f1832d99b 74 Pfam PF13617 YnbE-like lipoprotein 21 72 1.0E-23 T 15-10-2018 IPR025985 YnbE-like lipoprotein XDD1_2098 f91107b0139642c541d6c37f1832d99b 74 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 28 74 2.0E-17 T 15-10-2018 XDD1_3398 e9f875fa2dc8bc9ff96839e0865dda96 202 Gene3D G3DSA:3.40.50.1820 1 198 1.5E-61 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_3398 e9f875fa2dc8bc9ff96839e0865dda96 202 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 1.1E-66 T 15-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA XDD1_3398 e9f875fa2dc8bc9ff96839e0865dda96 202 SUPERFAMILY SSF53474 3 188 5.69E-20 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_0812 dcc4ddb73050bb9f9856f9e8b32cab50 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 41.011 T 15-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 XDD1_0812 dcc4ddb73050bb9f9856f9e8b32cab50 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 2.1E-127 T 15-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 XDD1_1735 bd9ca4d3bd36f2a0b18d286e456a1b54 60 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 4.0E-15 T 15-10-2018 IPR005371 Uncharacterised protein family UPF0181 XDD1_1735 bd9ca4d3bd36f2a0b18d286e456a1b54 60 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 58 19.475 T 15-10-2018 IPR005371 Uncharacterised protein family UPF0181 XDD1_1735 bd9ca4d3bd36f2a0b18d286e456a1b54 60 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 50 8.8E-27 T 15-10-2018 IPR005371 Uncharacterised protein family UPF0181 XDD1_3498 171f9c70bb7ef46224a96d72cee45183 187 Pfam PF13592 Winged helix-turn helix 108 156 3.6E-7 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_3498 171f9c70bb7ef46224a96d72cee45183 187 Pfam PF13384 Homeodomain-like domain 26 73 1.5E-10 T 15-10-2018 XDD1_3498 171f9c70bb7ef46224a96d72cee45183 187 SUPERFAMILY SSF46689 14 140 3.4E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3526 627a90eff2be69c8a546f470d3664d7e 182 Pfam PF03968 OstA-like protein 34 143 2.5E-27 T 15-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal XDD1_3526 627a90eff2be69c8a546f470d3664d7e 182 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 3 163 23.556 T 15-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 XDD1_3526 627a90eff2be69c8a546f470d3664d7e 182 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 23 162 2.5E-45 T 15-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 XDD1_3526 627a90eff2be69c8a546f470d3664d7e 182 Gene3D G3DSA:2.60.450.10 23 160 3.3E-48 T 15-10-2018 XDD1_1693 6d7f9bd300b41d32a137899e00319897 117 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 6 110 1.1E-18 T 15-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family XDD1_1693 6d7f9bd300b41d32a137899e00319897 117 Pfam PF05119 Phage terminase, small subunit 15 109 2.0E-20 T 15-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family XDD1_0042 1b5186950293d0886c2cf624fd58cce3 206 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 204 1.1E-56 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 XDD1_0042 1b5186950293d0886c2cf624fd58cce3 206 PIRSF PIRSF003078 1 206 1.5E-59 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 XDD1_0042 1b5186950293d0886c2cf624fd58cce3 206 Pfam PF02527 rRNA small subunit methyltransferase G 20 201 2.2E-61 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 XDD1_0042 1b5186950293d0886c2cf624fd58cce3 206 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 202 28.079 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 XDD1_0042 1b5186950293d0886c2cf624fd58cce3 206 SUPERFAMILY SSF53335 2 204 5.22E-39 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_0042 1b5186950293d0886c2cf624fd58cce3 206 Gene3D G3DSA:3.40.50.150 1 206 1.4E-68 T 15-10-2018 XDD1_1507 3217d0e09f489366a07e5ab3a67307c5 133 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 21 132 3.3E-40 T 15-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 XDD1_1507 3217d0e09f489366a07e5ab3a67307c5 133 Pfam PF07511 Protein of unknown function (DUF1525) 21 132 9.3E-37 T 15-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 XDD1_2071 b2d03c6ddffdd7e062c057de9f43814b 325 SUPERFAMILY SSF53807 33 324 1.96E-74 T 15-10-2018 XDD1_2071 b2d03c6ddffdd7e062c057de9f43814b 325 Pfam PF01297 Zinc-uptake complex component A periplasmic 34 320 3.2E-57 T 15-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 XDD1_2071 b2d03c6ddffdd7e062c057de9f43814b 325 Gene3D G3DSA:3.40.50.1980 214 325 1.4E-40 T 15-10-2018 XDD1_2071 b2d03c6ddffdd7e062c057de9f43814b 325 Gene3D G3DSA:3.40.50.1980 33 213 7.9E-54 T 15-10-2018 XDD1_1237 cce730ae7e33929b571042c2301c3bf0 368 Gene3D G3DSA:3.40.50.1980 60 196 1.5E-35 T 15-10-2018 XDD1_1237 cce730ae7e33929b571042c2301c3bf0 368 Gene3D G3DSA:3.40.50.1980 199 358 6.3E-37 T 15-10-2018 XDD1_1237 cce730ae7e33929b571042c2301c3bf0 368 SUPERFAMILY SSF53807 76 353 6.28E-43 T 15-10-2018 XDD1_1237 cce730ae7e33929b571042c2301c3bf0 368 Pfam PF01497 Periplasmic binding protein 133 320 2.7E-18 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain XDD1_3415 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3415 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3415 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3415 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3415 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 6.3E-22 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3415 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3415 e0f63aa874b218a4c9d359851efe3e90 71 Gene3D G3DSA:1.20.5.1150 16 54 2.1E-21 T 15-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3415 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3415 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 15-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_3415 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3586 ef9c93d0b73d45b546a0bd3387e509f5 598 Gene3D G3DSA:3.30.300.30 453 566 2.4E-17 T 15-10-2018 XDD1_3586 ef9c93d0b73d45b546a0bd3387e509f5 598 Pfam PF00501 AMP-binding enzyme 74 460 6.9E-86 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_3586 ef9c93d0b73d45b546a0bd3387e509f5 598 SUPERFAMILY SSF56801 40 588 7.85E-121 T 15-10-2018 XDD1_3586 ef9c93d0b73d45b546a0bd3387e509f5 598 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 15-10-2018 IPR020845 AMP-binding, conserved site XDD1_3586 ef9c93d0b73d45b546a0bd3387e509f5 598 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 91 483 3.6E-102 T 15-10-2018 IPR010071 Amino acid adenylation domain XDD1_3586 ef9c93d0b73d45b546a0bd3387e509f5 598 Gene3D G3DSA:3.40.50.12780 62 452 1.3E-99 T 15-10-2018 XDD1_2353 0675646fa397e26b662103e5a3d6b1ba 383 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 347 1.1E-121 T 15-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 XDD1_2353 0675646fa397e26b662103e5a3d6b1ba 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 5.5E-41 T 15-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 XDD1_2353 0675646fa397e26b662103e5a3d6b1ba 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 5.5E-41 T 15-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 XDD1_2353 0675646fa397e26b662103e5a3d6b1ba 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 5.5E-41 T 15-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 XDD1_2353 0675646fa397e26b662103e5a3d6b1ba 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 5.5E-41 T 15-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 XDD1_2353 0675646fa397e26b662103e5a3d6b1ba 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 5.5E-41 T 15-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 XDD1_2353 0675646fa397e26b662103e5a3d6b1ba 383 Gene3D G3DSA:3.40.1690.10 217 359 1.3E-58 T 15-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal XDD1_2353 0675646fa397e26b662103e5a3d6b1ba 383 SUPERFAMILY SSF160544 252 355 4.84E-40 T 15-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal XDD1_2353 0675646fa397e26b662103e5a3d6b1ba 383 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 353 1.4E-129 T 15-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 XDD1_1481 e4ca04946ecb5dc9c3b5d77d162784b9 327 Pfam PF13936 Helix-turn-helix domain 3 45 6.5E-15 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_1481 e4ca04946ecb5dc9c3b5d77d162784b9 327 Pfam PF00665 Integrase core domain 171 273 8.2E-13 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_1481 e4ca04946ecb5dc9c3b5d77d162784b9 327 SUPERFAMILY SSF53098 169 319 1.67E-26 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_1481 e4ca04946ecb5dc9c3b5d77d162784b9 327 Gene3D G3DSA:3.30.420.10 163 324 2.7E-10 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_1481 e4ca04946ecb5dc9c3b5d77d162784b9 327 SUPERFAMILY SSF46689 5 116 1.25E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3952 e4ca04946ecb5dc9c3b5d77d162784b9 327 Pfam PF13936 Helix-turn-helix domain 3 45 6.5E-15 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_3952 e4ca04946ecb5dc9c3b5d77d162784b9 327 Pfam PF00665 Integrase core domain 171 273 8.2E-13 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_3952 e4ca04946ecb5dc9c3b5d77d162784b9 327 SUPERFAMILY SSF53098 169 319 1.67E-26 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3952 e4ca04946ecb5dc9c3b5d77d162784b9 327 Gene3D G3DSA:3.30.420.10 163 324 2.7E-10 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_3952 e4ca04946ecb5dc9c3b5d77d162784b9 327 SUPERFAMILY SSF46689 5 116 1.25E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0846 e4ca04946ecb5dc9c3b5d77d162784b9 327 Pfam PF13936 Helix-turn-helix domain 3 45 6.5E-15 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_0846 e4ca04946ecb5dc9c3b5d77d162784b9 327 Pfam PF00665 Integrase core domain 171 273 8.2E-13 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_0846 e4ca04946ecb5dc9c3b5d77d162784b9 327 SUPERFAMILY SSF53098 169 319 1.67E-26 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0846 e4ca04946ecb5dc9c3b5d77d162784b9 327 Gene3D G3DSA:3.30.420.10 163 324 2.7E-10 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_0846 e4ca04946ecb5dc9c3b5d77d162784b9 327 SUPERFAMILY SSF46689 5 116 1.25E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0691 2c268f797221b742af8cb6d38259bf12 303 PIRSF PIRSF030850 14 303 7.5E-126 T 15-10-2018 IPR011396 Uncharacterised conserved protein UCP030850 XDD1_0691 2c268f797221b742af8cb6d38259bf12 303 Pfam PF13391 HNH endonuclease 195 249 4.0E-7 T 15-10-2018 IPR003615 HNH nuclease XDD1_1420 804db24919651ff1f4edabcff46f77f8 279 SUPERFAMILY SSF52821 158 278 2.75E-35 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily XDD1_1420 804db24919651ff1f4edabcff46f77f8 279 SUPERFAMILY SSF52821 2 151 4.71E-41 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily XDD1_1420 804db24919651ff1f4edabcff46f77f8 279 SMART SM00450 155 275 1.7E-20 T 15-10-2018 IPR001763 Rhodanese-like domain XDD1_1420 804db24919651ff1f4edabcff46f77f8 279 SMART SM00450 7 131 4.4E-19 T 15-10-2018 IPR001763 Rhodanese-like domain XDD1_1420 804db24919651ff1f4edabcff46f77f8 279 Pfam PF00581 Rhodanese-like domain 8 127 4.7E-13 T 15-10-2018 IPR001763 Rhodanese-like domain XDD1_1420 804db24919651ff1f4edabcff46f77f8 279 Pfam PF00581 Rhodanese-like domain 161 271 9.1E-11 T 15-10-2018 IPR001763 Rhodanese-like domain XDD1_1420 804db24919651ff1f4edabcff46f77f8 279 Gene3D G3DSA:3.40.250.10 1 148 3.8E-44 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily XDD1_1420 804db24919651ff1f4edabcff46f77f8 279 Gene3D G3DSA:3.40.250.10 149 279 1.5E-39 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily XDD1_1420 804db24919651ff1f4edabcff46f77f8 279 ProSitePatterns PS00683 Rhodanese C-terminal signature. 259 269 - T 15-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 XDD1_0805 94556bb25ed0796fb77faca3f3138dc8 113 SUPERFAMILY SSF46973 10 103 7.45E-30 T 15-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 XDD1_0805 94556bb25ed0796fb77faca3f3138dc8 113 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 11 103 1.2E-30 T 15-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 XDD1_0805 94556bb25ed0796fb77faca3f3138dc8 113 PIRSF PIRSF000699 1 110 3.7E-31 T 15-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 XDD1_0805 94556bb25ed0796fb77faca3f3138dc8 113 Gene3D G3DSA:1.20.58.80 1 105 1.1E-33 T 15-10-2018 XDD1_2469 7822ce7986b0ca3a654a76b962ad9cd0 484 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 XDD1_2469 7822ce7986b0ca3a654a76b962ad9cd0 484 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 442 6.2E-162 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 XDD1_2469 7822ce7986b0ca3a654a76b962ad9cd0 484 Pfam PF01235 Sodium:alanine symporter family 48 453 1.5E-160 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 XDD1_2469 7822ce7986b0ca3a654a76b962ad9cd0 484 PRINTS PR00175 Sodium/alanine symporter signature 350 372 1.4E-57 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 XDD1_2469 7822ce7986b0ca3a654a76b962ad9cd0 484 PRINTS PR00175 Sodium/alanine symporter signature 178 196 1.4E-57 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 XDD1_2469 7822ce7986b0ca3a654a76b962ad9cd0 484 PRINTS PR00175 Sodium/alanine symporter signature 87 109 1.4E-57 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 XDD1_2469 7822ce7986b0ca3a654a76b962ad9cd0 484 PRINTS PR00175 Sodium/alanine symporter signature 303 321 1.4E-57 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 XDD1_2469 7822ce7986b0ca3a654a76b962ad9cd0 484 PRINTS PR00175 Sodium/alanine symporter signature 411 431 1.4E-57 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 XDD1_2469 7822ce7986b0ca3a654a76b962ad9cd0 484 PRINTS PR00175 Sodium/alanine symporter signature 206 225 1.4E-57 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 XDD1_3059 3c63c0963db081b8980fbb962c07a190 320 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 182 8.8E-50 T 15-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain XDD1_3059 3c63c0963db081b8980fbb962c07a190 320 SMART SM00833 224 318 4.5E-13 T 15-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal XDD1_3059 3c63c0963db081b8980fbb962c07a190 320 Gene3D G3DSA:3.30.1220.10 203 319 5.8E-34 T 15-10-2018 IPR036627 CobW-like, C-terminal domain superfamily XDD1_3059 3c63c0963db081b8980fbb962c07a190 320 SUPERFAMILY SSF90002 224 316 1.83E-23 T 15-10-2018 XDD1_3059 3c63c0963db081b8980fbb962c07a190 320 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 224 317 2.3E-18 T 15-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal XDD1_3059 3c63c0963db081b8980fbb962c07a190 320 Gene3D G3DSA:3.40.50.300 1 202 3.5E-67 T 15-10-2018 XDD1_3059 3c63c0963db081b8980fbb962c07a190 320 SUPERFAMILY SSF52540 2 193 2.38E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3205 d7f6a920063b6f21d8eca68ce8c12f00 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 11 457 4.3E-95 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 XDD1_3205 d7f6a920063b6f21d8eca68ce8c12f00 458 Pfam PF02447 GntP family permease 6 457 1.4E-134 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 XDD1_3205 d7f6a920063b6f21d8eca68ce8c12f00 458 PIRSF PIRSF002746 1 458 1.9E-142 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 XDD1_3377 c64462c46dd8884d62e06683788cf6cf 233 Gene3D G3DSA:3.40.50.300 1 225 1.7E-61 T 15-10-2018 XDD1_3377 c64462c46dd8884d62e06683788cf6cf 233 SMART SM00382 24 214 6.0E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3377 c64462c46dd8884d62e06683788cf6cf 233 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 212 1.3E-100 T 15-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 XDD1_3377 c64462c46dd8884d62e06683788cf6cf 233 SUPERFAMILY SSF52540 1 221 5.92E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3377 c64462c46dd8884d62e06683788cf6cf 233 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_3377 c64462c46dd8884d62e06683788cf6cf 233 Pfam PF00005 ABC transporter 19 157 4.0E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_0580 d02a13248cdb519a25bf00382f318d6a 518 Gene3D G3DSA:3.40.920.10 13 221 6.1E-7 T 15-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 XDD1_0580 d02a13248cdb519a25bf00382f318d6a 518 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 24 212 2.4E-10 T 15-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 XDD1_3101 3cb18248281213d54f265c2e65a81779 256 PIRSF PIRSF006648 9 252 1.4E-21 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 XDD1_3101 3cb18248281213d54f265c2e65a81779 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 5.6E-5 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 XDD1_3101 3cb18248281213d54f265c2e65a81779 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 5.6E-5 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 XDD1_3101 3cb18248281213d54f265c2e65a81779 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 5.6E-5 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 XDD1_3101 3cb18248281213d54f265c2e65a81779 256 Pfam PF01061 ABC-2 type transporter 9 218 2.1E-35 T 15-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 XDD1_2461 72b0041f5a8bf8416a03c9a83edd5257 463 Pfam PF16325 Peptidase family U32 C-terminal domain 368 449 8.3E-22 T 15-10-2018 IPR032525 Peptidase family U32, C-terminal XDD1_2461 72b0041f5a8bf8416a03c9a83edd5257 463 Gene3D G3DSA:2.40.30.10 364 450 7.5E-11 T 15-10-2018 XDD1_2461 72b0041f5a8bf8416a03c9a83edd5257 463 Pfam PF01136 Peptidase family U32 75 352 9.3E-97 T 15-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 XDD1_2461 72b0041f5a8bf8416a03c9a83edd5257 463 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 15-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 XDD1_0167 3411eedadf44e6496617331597644f45 453 SUPERFAMILY SSF51182 186 451 4.89E-41 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily XDD1_0167 3411eedadf44e6496617331597644f45 453 SUPERFAMILY SSF53448 7 283 1.89E-66 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_0167 3411eedadf44e6496617331597644f45 453 Gene3D G3DSA:3.90.550.10 7 352 4.3E-114 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_0167 3411eedadf44e6496617331597644f45 453 Pfam PF01050 Mannose-6-phosphate isomerase 316 452 2.7E-20 T 15-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 XDD1_0167 3411eedadf44e6496617331597644f45 453 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 8 452 3.1E-149 T 15-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 XDD1_0167 3411eedadf44e6496617331597644f45 453 Pfam PF00483 Nucleotidyl transferase 10 286 1.7E-61 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 XDD1_2565 ad262b44333d0330935a60c863bb1d0e 180 SUPERFAMILY SSF56925 45 180 7.85E-7 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel XDD1_2565 ad262b44333d0330935a60c863bb1d0e 180 Pfam PF07437 YfaZ precursor 1 180 9.9E-61 T 15-10-2018 IPR009998 YfaZ XDD1_3409 266f04ecd7a71ba743354d5f119b62a1 327 Gene3D G3DSA:2.40.320.10 2 204 4.8E-38 T 15-10-2018 XDD1_3409 266f04ecd7a71ba743354d5f119b62a1 327 Pfam PF01928 CYTH domain 5 202 2.3E-29 T 15-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 XDD1_3409 266f04ecd7a71ba743354d5f119b62a1 327 SUPERFAMILY SSF55154 2 219 1.42E-49 T 15-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 XDD1_3409 266f04ecd7a71ba743354d5f119b62a1 327 SMART SM01118 3 208 2.0E-39 T 15-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 XDD1_0594 ccba5f9e3e36cf4928653e4390a79546 270 Gene3D G3DSA:3.30.70.2660 16 224 2.5E-58 T 15-10-2018 XDD1_0594 ccba5f9e3e36cf4928653e4390a79546 270 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 19 251 3.5E-48 T 15-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 XDD1_0594 ccba5f9e3e36cf4928653e4390a79546 270 TIGRFAM TIGR01868 casD_Cas5e: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI 18 201 1.8E-48 T 15-10-2018 IPR010147 CRISPR-associated protein, CasD GO:0003723|GO:0051607 XDD1_0594 ccba5f9e3e36cf4928653e4390a79546 270 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 19 61 1.6E-11 T 15-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal XDD1_3783 f222815e0eb58cbf76777b2532364957 401 Gene3D G3DSA:3.30.470.20 91 395 9.7E-53 T 15-10-2018 XDD1_3783 f222815e0eb58cbf76777b2532364957 401 Pfam PF13535 ATP-grasp domain 130 273 1.1E-10 T 15-10-2018 XDD1_3783 f222815e0eb58cbf76777b2532364957 401 SUPERFAMILY SSF56059 96 298 4.21E-25 T 15-10-2018 XDD1_2452 ad3a06c7663e870e28fc9d718febad83 460 Gene3D G3DSA:3.30.300.310 416 455 7.2E-5 T 15-10-2018 XDD1_2452 ad3a06c7663e870e28fc9d718febad83 460 Pfam PF00501 AMP-binding enzyme 28 419 1.1E-67 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_2452 ad3a06c7663e870e28fc9d718febad83 460 Gene3D G3DSA:3.40.50.12780 13 413 1.9E-82 T 15-10-2018 XDD1_2452 ad3a06c7663e870e28fc9d718febad83 460 SUPERFAMILY SSF56801 22 449 2.88E-88 T 15-10-2018 XDD1_2129 fa7464e7ebf75707595eddd3590d2ca7 251 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.9E-12 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XDD1_2129 fa7464e7ebf75707595eddd3590d2ca7 251 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.9E-12 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XDD1_2129 fa7464e7ebf75707595eddd3590d2ca7 251 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 1.3E-15 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XDD1_2129 fa7464e7ebf75707595eddd3590d2ca7 251 Gene3D G3DSA:2.60.120.10 43 164 8.5E-49 T 15-10-2018 IPR014710 RmlC-like jelly roll fold XDD1_2129 fa7464e7ebf75707595eddd3590d2ca7 251 SUPERFAMILY SSF51206 23 162 5.24E-32 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like XDD1_2129 fa7464e7ebf75707595eddd3590d2ca7 251 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 1.9E-16 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain XDD1_2129 fa7464e7ebf75707595eddd3590d2ca7 251 SMART SM00100 30 151 4.6E-23 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain XDD1_2129 fa7464e7ebf75707595eddd3590d2ca7 251 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 15-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 XDD1_2129 fa7464e7ebf75707595eddd3590d2ca7 251 Gene3D G3DSA:1.10.10.10 165 247 6.3E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2129 fa7464e7ebf75707595eddd3590d2ca7 251 SMART SM00419 187 235 2.8E-13 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XDD1_2129 fa7464e7ebf75707595eddd3590d2ca7 251 SUPERFAMILY SSF46785 165 244 1.82E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3408 2b2586abe7f2fd67e9741dd44b647817 950 Gene3D G3DSA:1.20.120.330 286 441 6.7E-56 T 15-10-2018 XDD1_3408 2b2586abe7f2fd67e9741dd44b647817 950 SUPERFAMILY SSF81301 526 816 5.89E-90 T 15-10-2018 XDD1_3408 2b2586abe7f2fd67e9741dd44b647817 950 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 35 276 2.7E-92 T 15-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 XDD1_3408 2b2586abe7f2fd67e9741dd44b647817 950 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 556 806 8.9E-96 T 15-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 XDD1_3408 2b2586abe7f2fd67e9741dd44b647817 950 Gene3D G3DSA:3.30.460.100 563 812 1.8E-95 T 15-10-2018 XDD1_3408 2b2586abe7f2fd67e9741dd44b647817 950 Pfam PF08335 GlnD PII-uridylyltransferase 298 437 2.1E-44 T 15-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 XDD1_3408 2b2586abe7f2fd67e9741dd44b647817 950 Pfam PF08335 GlnD PII-uridylyltransferase 826 918 4.1E-10 T 15-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 XDD1_3408 2b2586abe7f2fd67e9741dd44b647817 950 SUPERFAMILY SSF81593 816 944 2.9E-31 T 15-10-2018 XDD1_3408 2b2586abe7f2fd67e9741dd44b647817 950 SUPERFAMILY SSF81593 288 437 4.87E-43 T 15-10-2018 XDD1_3408 2b2586abe7f2fd67e9741dd44b647817 950 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 28 946 19.621 T 15-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 XDD1_3408 2b2586abe7f2fd67e9741dd44b647817 950 Gene3D G3DSA:1.10.4050.10 1 110 6.0E-29 T 15-10-2018 XDD1_3408 2b2586abe7f2fd67e9741dd44b647817 950 Gene3D G3DSA:1.20.120.330 813 947 3.6E-44 T 15-10-2018 XDD1_3408 2b2586abe7f2fd67e9741dd44b647817 950 Gene3D G3DSA:1.20.120.1510 451 562 2.8E-30 T 15-10-2018 XDD1_3408 2b2586abe7f2fd67e9741dd44b647817 950 SUPERFAMILY SSF81301 34 287 1.54E-87 T 15-10-2018 XDD1_3408 2b2586abe7f2fd67e9741dd44b647817 950 Gene3D G3DSA:3.30.460.10 112 285 6.0E-66 T 15-10-2018 XDD1_2871 4a0a2f397cec9fc44b18abd89c2c04eb 349 Pfam PF13592 Winged helix-turn helix 100 155 3.4E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_2871 4a0a2f397cec9fc44b18abd89c2c04eb 349 Pfam PF13551 Winged helix-turn helix 32 89 7.5E-9 T 15-10-2018 XDD1_2871 4a0a2f397cec9fc44b18abd89c2c04eb 349 SUPERFAMILY SSF53098 222 322 1.08E-7 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_2871 4a0a2f397cec9fc44b18abd89c2c04eb 349 Gene3D G3DSA:3.30.420.470 133 342 7.6E-12 T 15-10-2018 XDD1_2871 4a0a2f397cec9fc44b18abd89c2c04eb 349 SUPERFAMILY SSF46689 17 131 2.96E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2871 4a0a2f397cec9fc44b18abd89c2c04eb 349 Pfam PF13358 DDE superfamily endonuclease 169 313 2.9E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_1822 8f2d0791b1a2527ba9410b46a3c42320 106 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 19 69 7.1E-19 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 XDD1_0883 815ef3ec5797a0a72a428c3ae89ea747 135 Gene3D G3DSA:3.10.129.10 1 131 2.1E-35 T 15-10-2018 XDD1_0883 815ef3ec5797a0a72a428c3ae89ea747 135 PIRSF PIRSF003230 1 134 1.8E-25 T 15-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 XDD1_0883 815ef3ec5797a0a72a428c3ae89ea747 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 118 3.9E-29 T 15-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 XDD1_0883 815ef3ec5797a0a72a428c3ae89ea747 135 Pfam PF13279 Thioesterase-like superfamily 11 115 1.1E-17 T 15-10-2018 XDD1_0883 815ef3ec5797a0a72a428c3ae89ea747 135 SUPERFAMILY SSF54637 5 130 1.7E-36 T 15-10-2018 IPR029069 HotDog domain superfamily XDD1_0210 bd00247881421d84800960e42461b1d5 295 SUPERFAMILY SSF51730 22 293 1.88E-96 T 15-10-2018 IPR029041 FAD-linked oxidoreductase-like XDD1_0210 bd00247881421d84800960e42461b1d5 295 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 7.4E-105 T 15-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 XDD1_0210 bd00247881421d84800960e42461b1d5 295 Gene3D G3DSA:3.20.20.220 1 295 2.7E-117 T 15-10-2018 XDD1_0210 bd00247881421d84800960e42461b1d5 295 Pfam PF02219 Methylenetetrahydrofolate reductase 18 291 5.3E-107 T 15-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 XDD1_3391 9717f985d64f8beeac62cc87401e76fb 272 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 268 1.6E-143 T 15-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 XDD1_3391 9717f985d64f8beeac62cc87401e76fb 272 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 51.765 T 15-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 XDD1_3391 9717f985d64f8beeac62cc87401e76fb 272 Pfam PF00149 Calcineurin-like phosphoesterase 4 127 3.6E-14 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 XDD1_3391 9717f985d64f8beeac62cc87401e76fb 272 Gene3D G3DSA:3.60.21.10 1 270 6.2E-82 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like XDD1_3391 9717f985d64f8beeac62cc87401e76fb 272 PIRSF PIRSF000903 1 272 1.5E-124 T 15-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 XDD1_3391 9717f985d64f8beeac62cc87401e76fb 272 SUPERFAMILY SSF56300 1 259 1.03E-56 T 15-10-2018 XDD1_0630 75884d50fda43d09d14812fbecab59d4 359 Pfam PF15608 PELOTA RNA binding domain 277 357 6.3E-29 T 15-10-2018 IPR028157 PELOTA RNA-binding domain XDD1_0630 75884d50fda43d09d14812fbecab59d4 359 Pfam PF11202 Phosphoribosyl transferase (PRTase) 9 248 1.0E-89 T 15-10-2018 IPR011215 Phosphoribosyl transferase XDD1_0630 75884d50fda43d09d14812fbecab59d4 359 PIRSF PIRSF020979 1 359 1.1E-173 T 15-10-2018 IPR011215 Phosphoribosyl transferase XDD1_3404 1c05a681b1252f4cfdc06f5c8c6cbdb7 259 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 235 2.9E-25 T 15-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 XDD1_3404 1c05a681b1252f4cfdc06f5c8c6cbdb7 259 PIRSF PIRSF006157 1 259 1.2E-84 T 15-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 XDD1_3404 1c05a681b1252f4cfdc06f5c8c6cbdb7 259 SUPERFAMILY SSF53213 5 258 1.24E-81 T 15-10-2018 XDD1_3404 1c05a681b1252f4cfdc06f5c8c6cbdb7 259 Gene3D G3DSA:3.40.830.10 2 259 3.8E-82 T 15-10-2018 XDD1_3376 0d3866ec6fe2b0cdae0cf0f7cd5fe840 534 SUPERFAMILY SSF161098 285 528 1.83E-29 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_3376 0d3866ec6fe2b0cdae0cf0f7cd5fe840 534 SUPERFAMILY SSF161098 13 264 1.85E-43 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_3376 0d3866ec6fe2b0cdae0cf0f7cd5fe840 534 Gene3D G3DSA:1.10.3720.10 290 533 3.3E-23 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_3376 0d3866ec6fe2b0cdae0cf0f7cd5fe840 534 Gene3D G3DSA:1.10.3720.10 8 269 1.2E-43 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_3376 0d3866ec6fe2b0cdae0cf0f7cd5fe840 534 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 525 5.9E-236 T 15-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 XDD1_3376 0d3866ec6fe2b0cdae0cf0f7cd5fe840 534 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 255 2.9E-11 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_2301 47f7fd42db8ce2588c9126dcd3e38d29 490 Pfam PF07196 Flagellin hook IN motif 140 191 2.0E-9 T 15-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 XDD1_2301 47f7fd42db8ce2588c9126dcd3e38d29 490 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 233 480 8.3E-63 T 15-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 XDD1_2301 47f7fd42db8ce2588c9126dcd3e38d29 490 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 9 104 2.8E-21 T 15-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 XDD1_1409 202d5de726e18ab04414767f610066de 386 Pfam PF12698 ABC-2 family transporter protein 39 378 2.2E-37 T 15-10-2018 XDD1_3549 88081e711b0ef65fcd92abcd55a305ec 489 Gene3D G3DSA:2.40.50.140 31 127 3.5E-31 T 15-10-2018 XDD1_3549 88081e711b0ef65fcd92abcd55a305ec 489 SUPERFAMILY SSF50249 39 128 4.19E-19 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_3549 88081e711b0ef65fcd92abcd55a305ec 489 Gene3D G3DSA:3.40.1260.20 402 489 6.6E-6 T 15-10-2018 XDD1_3549 88081e711b0ef65fcd92abcd55a305ec 489 SMART SM00316 37 122 3.5E-9 T 15-10-2018 IPR022967 RNA-binding domain, S1 XDD1_3549 88081e711b0ef65fcd92abcd55a305ec 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 1.2E-173 T 15-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 XDD1_3549 88081e711b0ef65fcd92abcd55a305ec 489 Pfam PF00575 S1 RNA binding domain 38 109 4.8E-6 T 15-10-2018 IPR003029 S1 domain GO:0003676 XDD1_3549 88081e711b0ef65fcd92abcd55a305ec 489 Pfam PF10150 Ribonuclease E/G family 124 393 4.3E-103 T 15-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 XDD1_2470 804d87280b646b1ca32b4964a40b0682 159 Gene3D G3DSA:2.40.128.460 28 155 7.4E-35 T 15-10-2018 IPR038643 PliI superfamily XDD1_2470 804d87280b646b1ca32b4964a40b0682 159 Pfam PF16743 Periplasmic lysozyme inhibitor of I-type lysozyme 27 149 1.3E-42 T 15-10-2018 IPR031948 Periplasmic lysozyme inhibitor, I-type XDD1_1261 c994a1515da63c68dd4f0aa6ce758dd5 123 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 121 17.634 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 XDD1_1261 c994a1515da63c68dd4f0aa6ce758dd5 123 TIGRFAM TIGR00494 crcB: protein CrcB 6 119 4.7E-34 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 XDD1_1261 c994a1515da63c68dd4f0aa6ce758dd5 123 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 115 3.2E-24 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 XDD1_1976 3c6ea6cc192028cfda9bb07d19f08e24 449 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 436 1.1E-165 T 15-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 XDD1_1976 3c6ea6cc192028cfda9bb07d19f08e24 449 PIRSF PIRSF006446 2 449 5.5E-218 T 15-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 XDD1_0346 d936dfb2d1a3ec808da271f090ffd072 362 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 8 350 4.7E-163 T 15-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 XDD1_0346 d936dfb2d1a3ec808da271f090ffd072 362 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 28.907 T 15-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 XDD1_0346 d936dfb2d1a3ec808da271f090ffd072 362 Pfam PF00953 Glycosyl transferase family 4 74 231 3.1E-27 T 15-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 XDD1_2539 b778f99f6923eba0764aafec72be27ba 606 Gene3D G3DSA:3.40.50.300 208 400 3.8E-33 T 15-10-2018 XDD1_2539 b778f99f6923eba0764aafec72be27ba 606 SUPERFAMILY SSF52540 71 380 2.45E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2539 b778f99f6923eba0764aafec72be27ba 606 SMART SM00487 22 200 6.9E-20 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XDD1_2539 b778f99f6923eba0764aafec72be27ba 606 SUPERFAMILY SSF57829 446 486 4.21E-6 T 15-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 XDD1_2539 b778f99f6923eba0764aafec72be27ba 606 Pfam PF04851 Type III restriction enzyme, res subunit 24 176 2.3E-25 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XDD1_2539 b778f99f6923eba0764aafec72be27ba 606 SMART SM00490 284 366 1.8E-8 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_2539 b778f99f6923eba0764aafec72be27ba 606 Pfam PF00271 Helicase conserved C-terminal domain 262 364 8.6E-13 T 15-10-2018 IPR001650 Helicase, C-terminal XDD1_2539 b778f99f6923eba0764aafec72be27ba 606 Gene3D G3DSA:3.40.50.300 14 188 1.3E-30 T 15-10-2018 XDD1_0978 8c7c1f521f45cc60dcb3740ae3df5797 184 Gene3D G3DSA:3.40.1350.140 21 177 2.0E-54 T 15-10-2018 IPR038231 MepB-like superfamily XDD1_0978 8c7c1f521f45cc60dcb3740ae3df5797 184 PIRSF PIRSF032285 16 178 8.5E-49 T 15-10-2018 IPR011235 MepB-like XDD1_0978 8c7c1f521f45cc60dcb3740ae3df5797 184 Pfam PF08877 MepB protein 40 162 2.5E-47 T 15-10-2018 IPR011235 MepB-like XDD1_0225 e3307d5a6e7e0303b012f8847daec8e1 205 Pfam PF13358 DDE superfamily endonuclease 129 198 2.6E-7 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0225 e3307d5a6e7e0303b012f8847daec8e1 205 Pfam PF01710 Transposase 1 108 6.0E-21 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 XDD1_0254 e3307d5a6e7e0303b012f8847daec8e1 205 Pfam PF13358 DDE superfamily endonuclease 129 198 2.6E-7 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0254 e3307d5a6e7e0303b012f8847daec8e1 205 Pfam PF01710 Transposase 1 108 6.0E-21 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 XDD1_3222 09f724e8517aac8ddc680e47a967bb20 424 SUPERFAMILY SSF51197 5 419 1.56E-133 T 15-10-2018 XDD1_3222 09f724e8517aac8ddc680e47a967bb20 424 Gene3D G3DSA:2.60.120.330 1 421 3.6E-143 T 15-10-2018 IPR027443 Isopenicillin N synthase-like XDD1_3222 09f724e8517aac8ddc680e47a967bb20 424 Pfam PF07350 Protein of unknown function (DUF1479) 16 419 2.8E-130 T 15-10-2018 IPR010856 Protein of unknown function DUF1479 XDD1_2552 29345b9ef165178059a426bd2e9a2129 131 SUPERFAMILY SSF54593 6 125 2.02E-14 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XDD1_2552 29345b9ef165178059a426bd2e9a2129 131 Gene3D G3DSA:3.10.180.10 2 130 7.6E-44 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XDD1_0565 eda30b8cab78d0ad9c5e526ed1ecb1a5 261 Gene3D G3DSA:3.50.30.50 1 260 4.7E-91 T 15-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 XDD1_0565 eda30b8cab78d0ad9c5e526ed1ecb1a5 261 SUPERFAMILY SSF102198 17 258 2.62E-53 T 15-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 XDD1_0565 eda30b8cab78d0ad9c5e526ed1ecb1a5 261 Pfam PF04199 Putative cyclase 20 197 2.9E-35 T 15-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 XDD1_2473 4b1448a1ea9a58ea02bda827c4bd5ea0 417 SUPERFAMILY SSF53659 4 417 3.84E-148 T 15-10-2018 XDD1_2473 4b1448a1ea9a58ea02bda827c4bd5ea0 417 SMART SM01329 29 413 4.0E-177 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 XDD1_2473 4b1448a1ea9a58ea02bda827c4bd5ea0 417 Gene3D G3DSA:3.40.718.10 1 417 1.0E-185 T 15-10-2018 XDD1_2473 4b1448a1ea9a58ea02bda827c4bd5ea0 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 417 3.3E-235 T 15-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 XDD1_2473 4b1448a1ea9a58ea02bda827c4bd5ea0 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 413 4.7E-118 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 XDD1_2473 4b1448a1ea9a58ea02bda827c4bd5ea0 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 304 323 - T 15-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 XDD1_0438 fc810e99ededf3ad9e73b0f26abb9df8 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 4.9E-23 T 15-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 XDD1_0438 fc810e99ededf3ad9e73b0f26abb9df8 206 Gene3D G3DSA:3.10.50.40 69 206 1.3E-51 T 15-10-2018 XDD1_0438 fc810e99ededf3ad9e73b0f26abb9df8 206 Gene3D G3DSA:1.10.287.460 5 68 8.7E-19 T 15-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 XDD1_0438 fc810e99ededf3ad9e73b0f26abb9df8 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 203 2.3E-27 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain XDD1_0438 fc810e99ededf3ad9e73b0f26abb9df8 206 SUPERFAMILY SSF54534 8 205 6.48E-56 T 15-10-2018 XDD1_3567 6310a474d47982ea5d4cba5f8efc5c09 248 SUPERFAMILY SSF141452 5 152 4.32E-29 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_3567 6310a474d47982ea5d4cba5f8efc5c09 248 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 153 1.3E-50 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_3567 6310a474d47982ea5d4cba5f8efc5c09 248 Gene3D G3DSA:2.30.110.20 3 157 1.8E-45 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_3567 6310a474d47982ea5d4cba5f8efc5c09 248 Pfam PF05638 Type VI secretion system effector, Hcp 6 143 1.4E-18 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_3721 c1ee701712a7f0667c404f8680d8430d 112 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 19 69 7.0E-16 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 XDD1_0808 92cd9b0ee3fe0646d2583ce1faab2115 645 Gene3D G3DSA:1.10.1790.10 290 391 5.6E-14 T 15-10-2018 XDD1_0808 92cd9b0ee3fe0646d2583ce1faab2115 645 SUPERFAMILY SSF63520 186 268 2.62E-7 T 15-10-2018 IPR036634 PRD domain superfamily GO:0006355 XDD1_0808 92cd9b0ee3fe0646d2583ce1faab2115 645 Pfam PF00874 PRD domain 301 388 2.8E-14 T 15-10-2018 IPR011608 PRD domain GO:0006355 XDD1_0808 92cd9b0ee3fe0646d2583ce1faab2115 645 Pfam PF00874 PRD domain 193 267 1.3E-5 T 15-10-2018 IPR011608 PRD domain GO:0006355 XDD1_0808 92cd9b0ee3fe0646d2583ce1faab2115 645 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 500 637 1.7E-22 T 15-10-2018 IPR002178 PTS EIIA type-2 domain XDD1_0808 92cd9b0ee3fe0646d2583ce1faab2115 645 SUPERFAMILY SSF63520 288 393 4.32E-18 T 15-10-2018 IPR036634 PRD domain superfamily GO:0006355 XDD1_0808 92cd9b0ee3fe0646d2583ce1faab2115 645 Gene3D G3DSA:1.10.10.10 4 67 8.1E-9 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0808 92cd9b0ee3fe0646d2583ce1faab2115 645 SUPERFAMILY SSF55804 500 638 1.11E-25 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 XDD1_0808 92cd9b0ee3fe0646d2583ce1faab2115 645 Pfam PF08279 HTH domain 10 63 5.9E-5 T 15-10-2018 IPR013196 Helix-turn-helix, type 11 XDD1_0808 92cd9b0ee3fe0646d2583ce1faab2115 645 Pfam PF05043 Mga helix-turn-helix domain 84 159 3.8E-10 T 15-10-2018 IPR007737 Mga helix-turn-helix domain XDD1_0808 92cd9b0ee3fe0646d2583ce1faab2115 645 Gene3D G3DSA:3.40.930.10 498 638 5.7E-21 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 XDD1_1018 fd6a4bb92e48b05a3710a27e3be03536 457 TIGRFAM TIGR02332 HpaX: 4-hydroxyphenylacetate permease 28 439 4.0E-241 T 15-10-2018 IPR012707 4-hydroxyphenylacetate permease GO:1900754|GO:1901241 XDD1_1018 fd6a4bb92e48b05a3710a27e3be03536 457 Gene3D G3DSA:1.20.1250.20 14 453 2.0E-77 T 15-10-2018 XDD1_1018 fd6a4bb92e48b05a3710a27e3be03536 457 SUPERFAMILY SSF103473 22 452 1.01E-83 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1018 fd6a4bb92e48b05a3710a27e3be03536 457 Pfam PF07690 Major Facilitator Superfamily 40 398 7.4E-46 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0542 0022fca248311151922da005e9c8ef26 78 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 4 61 1.2E-19 T 15-10-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system XDD1_1734 dbb409ceebb0b891a764a93edc4dcbc4 456 Gene3D G3DSA:3.60.120.10 3 451 6.7E-177 T 15-10-2018 IPR005801 ADC synthase GO:0009058 XDD1_1734 dbb409ceebb0b891a764a93edc4dcbc4 456 Pfam PF00425 chorismate binding enzyme 189 442 7.6E-95 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal XDD1_1734 dbb409ceebb0b891a764a93edc4dcbc4 456 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 106 443 9.0E-125 T 15-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 XDD1_1734 dbb409ceebb0b891a764a93edc4dcbc4 456 PRINTS PR00095 Anthranilate synthase component I signature 304 317 3.3E-17 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XDD1_1734 dbb409ceebb0b891a764a93edc4dcbc4 456 PRINTS PR00095 Anthranilate synthase component I signature 290 303 3.3E-17 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XDD1_1734 dbb409ceebb0b891a764a93edc4dcbc4 456 PRINTS PR00095 Anthranilate synthase component I signature 384 398 3.3E-17 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XDD1_1734 dbb409ceebb0b891a764a93edc4dcbc4 456 PRINTS PR00095 Anthranilate synthase component I signature 399 413 3.3E-17 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XDD1_1734 dbb409ceebb0b891a764a93edc4dcbc4 456 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 153 2.8E-25 T 15-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XDD1_1734 dbb409ceebb0b891a764a93edc4dcbc4 456 SUPERFAMILY SSF56322 4 450 2.22E-147 T 15-10-2018 IPR005801 ADC synthase GO:0009058 XDD1_3588 c9ea93f5fb963db1cec8fd102ff5a7ad 358 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 32 345 5.9E-68 T 15-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 XDD1_3588 c9ea93f5fb963db1cec8fd102ff5a7ad 358 Gene3D G3DSA:3.20.20.190 25 352 3.8E-132 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 XDD1_3588 c9ea93f5fb963db1cec8fd102ff5a7ad 358 SUPERFAMILY SSF51695 28 351 3.92E-90 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 XDD1_3216 7010bd02a86163d2230d82873f9ece85 299 SUPERFAMILY SSF103481 198 277 4.45E-7 T 15-10-2018 XDD1_3216 7010bd02a86163d2230d82873f9ece85 299 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 5.1E-75 T 15-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 XDD1_3216 7010bd02a86163d2230d82873f9ece85 299 SUPERFAMILY SSF103481 35 131 1.16E-7 T 15-10-2018 XDD1_3216 7010bd02a86163d2230d82873f9ece85 299 Pfam PF00892 EamA-like transporter family 139 274 2.9E-8 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_3216 7010bd02a86163d2230d82873f9ece85 299 Pfam PF00892 EamA-like transporter family 3 129 2.6E-6 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_1537 cf3c3354a77331555a39795e7e96eb96 105 Pfam PF07214 Protein of unknown function (DUF1418) 9 95 4.3E-25 T 15-10-2018 IPR010815 Protein of unknown function DUF1418 XDD1_2448 5b39dcf6a401b86d9fe771c245c8c92d 266 SUPERFAMILY SSF51182 34 154 7.56E-11 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily XDD1_2448 5b39dcf6a401b86d9fe771c245c8c92d 266 Gene3D G3DSA:2.60.120.10 56 166 3.3E-9 T 15-10-2018 IPR014710 RmlC-like jelly roll fold XDD1_1449 c2373b75c139d865e000e0b11e47c283 622 Pfam PF05170 AsmA family 4 208 1.0E-17 T 15-10-2018 IPR007844 AsmA XDD1_1449 c2373b75c139d865e000e0b11e47c283 622 Pfam PF05170 AsmA family 250 515 3.8E-29 T 15-10-2018 IPR007844 AsmA XDD1_3388 2352ab98c8bf6e06b54883e24e47de9a 329 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 323 1.5E-128 T 15-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 XDD1_3388 2352ab98c8bf6e06b54883e24e47de9a 329 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 33 320 3.1E-108 T 15-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 XDD1_3388 2352ab98c8bf6e06b54883e24e47de9a 329 SUPERFAMILY SSF53659 5 326 5.6E-114 T 15-10-2018 XDD1_3388 2352ab98c8bf6e06b54883e24e47de9a 329 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 4 327 36.57 T 15-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 XDD1_3388 2352ab98c8bf6e06b54883e24e47de9a 329 Gene3D G3DSA:3.40.718.10 1 329 3.8E-128 T 15-10-2018 XDD1_3842 4e465084556b90747012a4fe7afe0d4e 489 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 78 216 1.4E-16 T 15-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like XDD1_0551 0b4de1316602a56b07df9c1010d75b94 294 Pfam PF11195 Protein of unknown function (DUF2829) 38 108 4.7E-14 T 15-10-2018 IPR021361 Protein of unknown function DUF2829 XDD1_0551 0b4de1316602a56b07df9c1010d75b94 294 Pfam PF11195 Protein of unknown function (DUF2829) 139 209 3.6E-14 T 15-10-2018 IPR021361 Protein of unknown function DUF2829 XDD1_1624 d0d1335160eda13653e0048a32e8acb3 256 Pfam PF11195 Protein of unknown function (DUF2829) 38 101 3.2E-9 T 15-10-2018 IPR021361 Protein of unknown function DUF2829 XDD1_2019 cecd0b84d48b84b87465d14d985cd0bc 180 Gene3D G3DSA:1.10.3480.10 1 180 1.1E-25 T 15-10-2018 XDD1_2019 cecd0b84d48b84b87465d14d985cd0bc 180 SUPERFAMILY SSF89155 2 178 7.98E-39 T 15-10-2018 IPR036411 TorD-like superfamily XDD1_2019 cecd0b84d48b84b87465d14d985cd0bc 180 Pfam PF02613 Nitrate reductase delta subunit 43 146 2.7E-7 T 15-10-2018 IPR020945 DMSO/Nitrate reductase chaperone XDD1_2019 cecd0b84d48b84b87465d14d985cd0bc 180 PIRSF PIRSF004690 1 180 1.5E-62 T 15-10-2018 IPR026269 Tat proofreading chaperone DmsD-type XDD1_0885 a9fb0ab4be702073eef5df65a89ec1d9 350 Gene3D G3DSA:3.40.50.1100 22 322 4.4E-70 T 15-10-2018 XDD1_0885 a9fb0ab4be702073eef5df65a89ec1d9 350 SUPERFAMILY SSF53686 17 333 1.44E-70 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XDD1_0885 a9fb0ab4be702073eef5df65a89ec1d9 350 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 314 1.8E-44 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XDD1_0885 a9fb0ab4be702073eef5df65a89ec1d9 350 Gene3D G3DSA:3.40.50.1100 49 155 4.4E-70 T 15-10-2018 XDD1_3465 e3d41c0a7b2cb0f22dcf1857c28390e1 470 SUPERFAMILY SSF56801 37 468 4.45E-48 T 15-10-2018 XDD1_3465 e3d41c0a7b2cb0f22dcf1857c28390e1 470 Pfam PF00501 AMP-binding enzyme 147 301 3.7E-8 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_3465 e3d41c0a7b2cb0f22dcf1857c28390e1 470 Gene3D G3DSA:3.40.50.12780 30 318 2.6E-20 T 15-10-2018 XDD1_3465 e3d41c0a7b2cb0f22dcf1857c28390e1 470 Gene3D G3DSA:3.30.300.30 358 464 5.2E-15 T 15-10-2018 XDD1_1904 50404ae29c60667f2bb6c2167aa6c555 327 Gene3D G3DSA:1.20.58.340 140 262 6.1E-38 T 15-10-2018 XDD1_1904 50404ae29c60667f2bb6c2167aa6c555 327 Gene3D G3DSA:3.30.460.20 1 139 1.1E-33 T 15-10-2018 XDD1_1904 50404ae29c60667f2bb6c2167aa6c555 327 SUPERFAMILY SSF144083 263 324 3.79E-13 T 15-10-2018 XDD1_1904 50404ae29c60667f2bb6c2167aa6c555 327 SUPERFAMILY SSF143865 14 259 3.66E-46 T 15-10-2018 XDD1_1904 50404ae29c60667f2bb6c2167aa6c555 327 Gene3D G3DSA:1.20.58.340 270 327 4.7E-11 T 15-10-2018 XDD1_1904 50404ae29c60667f2bb6c2167aa6c555 327 Pfam PF01544 CorA-like Mg2+ transporter protein 39 323 3.8E-59 T 15-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 XDD1_1941 7c72aafb54a3555aa0da04da8b2be546 142 SUPERFAMILY SSF52402 2 142 1.84E-31 T 15-10-2018 XDD1_1941 7c72aafb54a3555aa0da04da8b2be546 142 PIRSF PIRSF006276 1 142 1.8E-19 T 15-10-2018 IPR006015 Universal stress protein A XDD1_1941 7c72aafb54a3555aa0da04da8b2be546 142 Gene3D G3DSA:3.40.50.620 1 142 3.7E-35 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_1941 7c72aafb54a3555aa0da04da8b2be546 142 Pfam PF00582 Universal stress protein family 1 142 2.6E-26 T 15-10-2018 IPR006016 UspA XDD1_1941 7c72aafb54a3555aa0da04da8b2be546 142 PRINTS PR01438 Universal stress protein signature 120 142 8.4E-14 T 15-10-2018 IPR006015 Universal stress protein A XDD1_1941 7c72aafb54a3555aa0da04da8b2be546 142 PRINTS PR01438 Universal stress protein signature 103 115 8.4E-14 T 15-10-2018 IPR006015 Universal stress protein A XDD1_1941 7c72aafb54a3555aa0da04da8b2be546 142 PRINTS PR01438 Universal stress protein signature 2 20 8.4E-14 T 15-10-2018 IPR006015 Universal stress protein A XDD1_2075 0cac371ef044a79ccf24fbc3c9fed9fb 282 SUPERFAMILY SSF53697 92 277 1.85E-43 T 15-10-2018 XDD1_2075 0cac371ef044a79ccf24fbc3c9fed9fb 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.2E-28 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 XDD1_2075 0cac371ef044a79ccf24fbc3c9fed9fb 282 Gene3D G3DSA:1.10.10.10 1 79 6.3E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2075 0cac371ef044a79ccf24fbc3c9fed9fb 282 Gene3D G3DSA:3.40.50.10490 94 276 4.2E-43 T 15-10-2018 XDD1_2075 0cac371ef044a79ccf24fbc3c9fed9fb 282 Pfam PF01380 SIS domain 124 252 2.7E-24 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XDD1_2075 0cac371ef044a79ccf24fbc3c9fed9fb 282 SUPERFAMILY SSF46689 1 80 3.94E-21 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0139 c549043e8ac3b1465136c920a7910f80 322 Gene3D G3DSA:3.20.20.370 2 315 1.0E-23 T 15-10-2018 XDD1_0139 c549043e8ac3b1465136c920a7910f80 322 SUPERFAMILY SSF88713 29 232 7.51E-10 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 XDD1_3741 e917d72cb7a48389e8dba8ce99c2fc16 112 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 19 69 7.0E-16 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 XDD1_0442 f01061a84e3978f379d7621604380f58 68 Gene3D G3DSA:3.30.1910.10 1 64 2.3E-23 T 15-10-2018 XDD1_0442 f01061a84e3978f379d7621604380f58 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 4.4E-28 T 15-10-2018 IPR009491 Protein of unknown function DUF1107 XDD1_0442 f01061a84e3978f379d7621604380f58 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 5.0E-27 T 15-10-2018 IPR009491 Protein of unknown function DUF1107 XDD1_2472 f780aeb7eb22823c53246de336d69c84 127 Pfam PF09413 Putative prokaryotic signal transducing protein 11 78 3.4E-6 T 15-10-2018 IPR018551 Domain of unknown function DUF2007 XDD1_2472 f780aeb7eb22823c53246de336d69c84 127 SUPERFAMILY SSF54913 11 78 2.67E-5 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta XDD1_0459 d268cfebd365a0fe685a8e075acb9c5d 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site XDD1_0459 d268cfebd365a0fe685a8e075acb9c5d 323 Gene3D G3DSA:1.10.600.10 1 322 1.0E-122 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily XDD1_0459 d268cfebd365a0fe685a8e075acb9c5d 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site XDD1_0459 d268cfebd365a0fe685a8e075acb9c5d 323 SUPERFAMILY SSF48576 5 321 3.17E-100 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily XDD1_0459 d268cfebd365a0fe685a8e075acb9c5d 323 Pfam PF00348 Polyprenyl synthetase 31 263 4.3E-77 T 15-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 XDD1_3462 b21fee21538843cbcb8c34ac4180ea90 85 Pfam PF00550 Phosphopantetheine attachment site 8 80 1.2E-7 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_3462 b21fee21538843cbcb8c34ac4180ea90 85 Gene3D G3DSA:1.10.1200.10 5 85 1.0E-19 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_3462 b21fee21538843cbcb8c34ac4180ea90 85 SUPERFAMILY SSF47336 2 83 7.2E-12 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1719 f53c114d2be4771f4112635981fe7989 250 Pfam PF01435 Peptidase family M48 71 244 4.7E-26 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 XDD1_1719 f53c114d2be4771f4112635981fe7989 250 Gene3D G3DSA:3.30.2010.10 58 146 6.4E-9 T 15-10-2018 XDD1_2344 9a78bb3715b6272de6809ed63b82b916 339 SUPERFAMILY SSF49401 204 339 1.89E-21 T 15-10-2018 IPR008966 Adhesion domain superfamily XDD1_2344 9a78bb3715b6272de6809ed63b82b916 339 Gene3D G3DSA:2.60.40.1090 192 339 5.3E-27 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 XDD1_2344 9a78bb3715b6272de6809ed63b82b916 339 Pfam PF00419 Fimbrial protein 195 338 5.6E-16 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 XDD1_1062 3ba04fd4bd1e63f019f203d8b505c593 68 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 10 58 2.0E-19 T 15-10-2018 IPR010260 DNA-binding transcriptional activator AlpA XDD1_1062 3ba04fd4bd1e63f019f203d8b505c593 68 Gene3D G3DSA:1.10.238.160 9 64 8.3E-7 T 15-10-2018 XDD1_3054 a5a4c24ce203f626b7810055c402511c 118 Pfam PF16068 Domain of unknown function (DUF4810) 26 110 5.1E-35 T 15-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats XDD1_3054 a5a4c24ce203f626b7810055c402511c 118 PIRSF PIRSF020555 1 118 1.6E-44 T 15-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats XDD1_3239 455207df25bd1947b4a9512d57b77d3a 107 Gene3D G3DSA:2.40.10.270 1 106 1.3E-37 T 15-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily XDD1_3239 455207df25bd1947b4a9512d57b77d3a 107 Pfam PF05521 Phage head-tail joining protein 7 100 3.9E-24 T 15-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor XDD1_3239 455207df25bd1947b4a9512d57b77d3a 107 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 6 101 1.4E-20 T 15-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor XDD1_0135 38c2036b9b5815bb0fece04320c60903 425 SUPERFAMILY SSF53756 58 419 1.37E-17 T 15-10-2018 XDD1_0135 38c2036b9b5815bb0fece04320c60903 425 Gene3D G3DSA:3.40.50.11720 37 209 3.1E-46 T 15-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 XDD1_0135 38c2036b9b5815bb0fece04320c60903 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 211 2.9E-64 T 15-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 XDD1_0135 38c2036b9b5815bb0fece04320c60903 425 Pfam PF00534 Glycosyl transferases group 1 289 399 1.5E-12 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 XDD1_0135 38c2036b9b5815bb0fece04320c60903 425 Gene3D G3DSA:3.40.50.2000 217 403 1.7E-68 T 15-10-2018 XDD1_1352 cb122c025dd1672bedb89848543e63e4 143 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 4 139 27.76 T 15-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 XDD1_1352 cb122c025dd1672bedb89848543e63e4 143 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 140 8.3E-24 T 15-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 XDD1_1352 cb122c025dd1672bedb89848543e63e4 143 Gene3D G3DSA:3.30.420.270 59 132 1.3E-23 T 15-10-2018 XDD1_1806 1dd3efd31b8e8aede02df2e1c022056d 356 Pfam PF00487 Fatty acid desaturase 56 303 4.2E-29 T 15-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 XDD1_3633 405f079c1cc60ab281bcce65feb708f7 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 7.7E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_3633 405f079c1cc60ab281bcce65feb708f7 296 Gene3D G3DSA:1.10.3720.10 1 283 1.5E-74 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_3633 405f079c1cc60ab281bcce65feb708f7 296 SUPERFAMILY SSF161098 8 296 1.7E-70 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_0772 139b39a869ab916382eddef9cb6d82d3 392 Pfam PF07690 Major Facilitator Superfamily 19 339 1.6E-36 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0772 139b39a869ab916382eddef9cb6d82d3 392 SUPERFAMILY SSF103473 11 385 6.54E-53 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0772 139b39a869ab916382eddef9cb6d82d3 392 Gene3D G3DSA:1.20.1250.20 12 383 6.9E-43 T 15-10-2018 XDD1_0772 139b39a869ab916382eddef9cb6d82d3 392 PRINTS PR00173 Glutamate-aspartate symporter signature 352 371 2.3E-6 T 15-10-2018 XDD1_0772 139b39a869ab916382eddef9cb6d82d3 392 PRINTS PR00173 Glutamate-aspartate symporter signature 96 116 2.3E-6 T 15-10-2018 XDD1_0772 139b39a869ab916382eddef9cb6d82d3 392 PRINTS PR00173 Glutamate-aspartate symporter signature 276 298 2.3E-6 T 15-10-2018 XDD1_0773 beae1895e4c0b6bfbc31ec00abddac45 165 Pfam PF11158 Protein of unknown function (DUF2938) 12 160 8.7E-66 T 15-10-2018 IPR021329 Protein of unknown function DUF2938 XDD1_1245 a0a877e999d4094491e96ffc4e70f607 803 Gene3D G3DSA:1.10.510.40 582 789 4.4E-72 T 15-10-2018 XDD1_1245 a0a877e999d4094491e96ffc4e70f607 803 Gene3D G3DSA:1.10.274.90 194 332 1.6E-44 T 15-10-2018 XDD1_1245 a0a877e999d4094491e96ffc4e70f607 803 SUPERFAMILY SSF55729 17 182 5.31E-42 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_1245 a0a877e999d4094491e96ffc4e70f607 803 Pfam PF06276 Ferric iron reductase FhuF-like transporter 615 772 8.1E-39 T 15-10-2018 IPR022770 Ferric iron reductase FhuF domain XDD1_1245 a0a877e999d4094491e96ffc4e70f607 803 Pfam PF04183 IucA / IucC family 343 593 1.2E-75 T 15-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 XDD1_1245 a0a877e999d4094491e96ffc4e70f607 803 Pfam PF13523 Acetyltransferase (GNAT) domain 27 169 5.5E-44 T 15-10-2018 XDD1_1245 a0a877e999d4094491e96ffc4e70f607 803 Gene3D G3DSA:3.40.630.30 4 185 1.7E-46 T 15-10-2018 XDD1_1245 a0a877e999d4094491e96ffc4e70f607 803 SMART SM01006 22 70 2.5E-10 T 15-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain XDD1_1214 753cda87d8be42e188f46fe7d0c2a00d 205 SUPERFAMILY SSF55729 16 186 4.25E-32 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_1214 753cda87d8be42e188f46fe7d0c2a00d 205 Gene3D G3DSA:3.40.630.30 11 201 2.9E-35 T 15-10-2018 XDD1_1214 753cda87d8be42e188f46fe7d0c2a00d 205 Pfam PF13302 Acetyltransferase (GNAT) domain 25 161 4.4E-13 T 15-10-2018 IPR000182 GNAT domain XDD1_2498 1845dcc9b6fad63846ccc49d9a720ed2 218 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 28.787 T 15-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 XDD1_2498 1845dcc9b6fad63846ccc49d9a720ed2 218 Gene3D G3DSA:3.40.50.300 1 210 1.8E-65 T 15-10-2018 XDD1_2498 1845dcc9b6fad63846ccc49d9a720ed2 218 Pfam PF02223 Thymidylate kinase 8 198 2.1E-60 T 15-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 XDD1_2498 1845dcc9b6fad63846ccc49d9a720ed2 218 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 4.5E-67 T 15-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 XDD1_2498 1845dcc9b6fad63846ccc49d9a720ed2 218 SUPERFAMILY SSF52540 1 209 2.14E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2498 1845dcc9b6fad63846ccc49d9a720ed2 218 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 15-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 XDD1_0177 9f9f4345f88bc5e48489252b27a87e88 103 Pfam PF13358 DDE superfamily endonuclease 3 86 4.1E-13 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_1312 b9ad5b2b6801b2d55b7f40c02eef4a3a 153 Pfam PF02794 RTX toxin acyltransferase family 18 150 3.4E-44 T 15-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 XDD1_1312 b9ad5b2b6801b2d55b7f40c02eef4a3a 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 85 107 1.9E-6 T 15-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 XDD1_1312 b9ad5b2b6801b2d55b7f40c02eef4a3a 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 20 36 1.9E-6 T 15-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 XDD1_1312 b9ad5b2b6801b2d55b7f40c02eef4a3a 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 63 81 1.9E-6 T 15-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 XDD1_0097 c20af525b8afb68ceb509e6821128beb 247 SUPERFAMILY SSF53335 3 246 3.61E-76 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_0097 c20af525b8afb68ceb509e6821128beb 247 Gene3D G3DSA:3.40.50.150 57 247 7.3E-74 T 15-10-2018 XDD1_0097 c20af525b8afb68ceb509e6821128beb 247 Gene3D G3DSA:3.40.1630.10 1 56 4.3E-27 T 15-10-2018 XDD1_0097 c20af525b8afb68ceb509e6821128beb 247 Pfam PF04445 Putative SAM-dependent methyltransferase 19 246 7.3E-110 T 15-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 XDD1_0097 c20af525b8afb68ceb509e6821128beb 247 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 247 36.98 T 15-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 XDD1_3053 f4839dc3cb32d204123009a5daf58332 221 Gene3D G3DSA:3.40.50.10610 23 190 1.5E-65 T 15-10-2018 XDD1_3053 f4839dc3cb32d204123009a5daf58332 221 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 11 212 2.0E-94 T 15-10-2018 IPR008517 Protein of unknown function DUF799 XDD1_3583 14d408000c79d5974d518c3203482301 84 Gene3D G3DSA:3.30.110.40 1 80 3.8E-31 T 15-10-2018 IPR036868 TusA-like domain superfamily XDD1_3583 14d408000c79d5974d518c3203482301 84 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.466 T 15-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 XDD1_3583 14d408000c79d5974d518c3203482301 84 Pfam PF01206 Sulfurtransferase TusA 10 79 4.1E-25 T 15-10-2018 IPR001455 TusA-like domain XDD1_3583 14d408000c79d5974d518c3203482301 84 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 15-10-2018 IPR001455 TusA-like domain XDD1_3583 14d408000c79d5974d518c3203482301 84 SUPERFAMILY SSF64307 5 79 2.49E-25 T 15-10-2018 IPR036868 TusA-like domain superfamily XDD1_1024 75e183fe119a1f4d25a067d56f6fb32e 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 XDD1_1024 75e183fe119a1f4d25a067d56f6fb32e 488 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 4 487 1.5E-221 T 15-10-2018 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 XDD1_1024 75e183fe119a1f4d25a067d56f6fb32e 488 Gene3D G3DSA:3.40.309.10 249 445 9.8E-177 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 XDD1_1024 75e183fe119a1f4d25a067d56f6fb32e 488 Gene3D G3DSA:3.40.605.10 19 474 9.8E-177 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 XDD1_1024 75e183fe119a1f4d25a067d56f6fb32e 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 XDD1_1024 75e183fe119a1f4d25a067d56f6fb32e 488 Pfam PF00171 Aldehyde dehydrogenase family 16 474 2.6E-171 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 XDD1_1024 75e183fe119a1f4d25a067d56f6fb32e 488 SUPERFAMILY SSF53720 2 480 2.88E-165 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XDD1_2757 b138efdcaf5ee6bc3e6671d4efbe79b7 514 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 117 291 1.3E-9 T 15-10-2018 IPR000477 Reverse transcriptase domain XDD1_1196 55c01aa5b8af149390ac134ffb229e28 398 Gene3D G3DSA:1.20.1250.20 12 392 1.1E-24 T 15-10-2018 XDD1_1196 55c01aa5b8af149390ac134ffb229e28 398 Pfam PF07690 Major Facilitator Superfamily 18 351 7.3E-23 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_1196 55c01aa5b8af149390ac134ffb229e28 398 SUPERFAMILY SSF103473 16 389 3.53E-27 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_3457 eb33458ca4ec0f80656463869a6aba5a 345 Gene3D G3DSA:1.10.443.10 164 334 1.1E-48 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XDD1_3457 eb33458ca4ec0f80656463869a6aba5a 345 Pfam PF00589 Phage integrase family 169 315 1.7E-21 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XDD1_3457 eb33458ca4ec0f80656463869a6aba5a 345 SUPERFAMILY SSF56349 56 324 1.67E-44 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XDD1_3717 b6e9c172d40fcfa4d2489c91476210ce 112 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 19 69 1.2E-15 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 XDD1_0894 d68b052ff9633cbf57f60241b4aa2f65 67 SUPERFAMILY SSF68989 1 67 5.36E-31 T 15-10-2018 IPR036666 HHA superfamily XDD1_0894 d68b052ff9633cbf57f60241b4aa2f65 67 Gene3D G3DSA:1.20.1280.40 1 67 2.2E-36 T 15-10-2018 IPR036666 HHA superfamily XDD1_0894 d68b052ff9633cbf57f60241b4aa2f65 67 Pfam PF05321 Haemolysin expression modulating protein 8 64 8.9E-33 T 15-10-2018 IPR007985 Haemolysin expression modulating, HHA XDD1_1972 89e7c9d0427229eebe0d9e5b0bc51e41 262 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_1972 89e7c9d0427229eebe0d9e5b0bc51e41 262 SUPERFAMILY SSF52540 1 228 2.02E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1972 89e7c9d0427229eebe0d9e5b0bc51e41 262 Pfam PF00005 ABC transporter 19 166 1.1E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1972 89e7c9d0427229eebe0d9e5b0bc51e41 262 SMART SM00382 27 224 3.1E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1972 89e7c9d0427229eebe0d9e5b0bc51e41 262 Gene3D G3DSA:3.40.50.300 2 253 5.7E-65 T 15-10-2018 XDD1_0361 7e9f447c2bb4a1c847969ff98eabccde 413 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 29 361 8.6E-113 T 15-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX XDD1_0361 7e9f447c2bb4a1c847969ff98eabccde 413 Gene3D G3DSA:1.20.1600.10 34 170 2.1E-5 T 15-10-2018 XDD1_1968 80556a09df19e4ddd2fe8e39bce10c03 617 Pfam PF04183 IucA / IucC family 154 397 2.3E-52 T 15-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 XDD1_1968 80556a09df19e4ddd2fe8e39bce10c03 617 Pfam PF06276 Ferric iron reductase FhuF-like transporter 443 586 1.9E-15 T 15-10-2018 IPR022770 Ferric iron reductase FhuF domain XDD1_1968 80556a09df19e4ddd2fe8e39bce10c03 617 Gene3D G3DSA:1.10.510.40 389 581 2.0E-10 T 15-10-2018 XDD1_2934 610f13cdbe8037decee788093f1a9422 197 Pfam PF12306 Inclusion body protein 3 186 8.6E-26 T 15-10-2018 IPR021087 Uncharacterised protein family PixA/AidA XDD1_2934 610f13cdbe8037decee788093f1a9422 197 Gene3D G3DSA:2.60.40.3910 1 187 8.4E-7 T 15-10-2018 IPR038712 PixA-like superfamily XDD1_1808 902d28a24e2a25496a58394ab6269aaa 501 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 226 232 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XDD1_1808 902d28a24e2a25496a58394ab6269aaa 501 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 390 500 2.1E-34 T 15-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XDD1_1808 902d28a24e2a25496a58394ab6269aaa 501 SUPERFAMILY SSF56276 389 501 1.96E-32 T 15-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 XDD1_1808 902d28a24e2a25496a58394ab6269aaa 501 Gene3D G3DSA:3.60.90.10 377 501 3.8E-41 T 15-10-2018 XDD1_1808 902d28a24e2a25496a58394ab6269aaa 501 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 388 501 24.884 T 15-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XDD1_1808 902d28a24e2a25496a58394ab6269aaa 501 SUPERFAMILY SSF53335 179 259 1.07E-6 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_1808 902d28a24e2a25496a58394ab6269aaa 501 Gene3D G3DSA:3.40.50.150 104 329 3.6E-54 T 15-10-2018 XDD1_1808 902d28a24e2a25496a58394ab6269aaa 501 Pfam PF01861 Protein of unknown function DUF43 115 338 1.0E-37 T 15-10-2018 IPR002723 N(4)-bis(aminopropyl)spermidine synthase, C-terminal XDD1_1808 902d28a24e2a25496a58394ab6269aaa 501 Pfam PF02675 S-adenosylmethionine decarboxylase 394 500 5.9E-32 T 15-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XDD1_1443 58819e916298778e60832d0458d58be5 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 4 226 1.6E-94 T 15-10-2018 IPR005261 Conserved hypothetical protein CHP00659 XDD1_1443 58819e916298778e60832d0458d58be5 231 Pfam PF04172 LrgB-like family 12 224 1.3E-76 T 15-10-2018 IPR007300 CidB/LrgB family XDD1_3067 6d4012722274eb0550152e1c8a24676a 431 Pfam PF07690 Major Facilitator Superfamily 25 385 1.9E-42 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_3067 6d4012722274eb0550152e1c8a24676a 431 SUPERFAMILY SSF103473 9 419 1.44E-67 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_3067 6d4012722274eb0550152e1c8a24676a 431 Gene3D G3DSA:1.20.1250.20 228 427 6.6E-36 T 15-10-2018 XDD1_3067 6d4012722274eb0550152e1c8a24676a 431 PIRSF PIRSF002808 1 431 7.4E-114 T 15-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 XDD1_3067 6d4012722274eb0550152e1c8a24676a 431 Gene3D G3DSA:1.20.1250.20 8 212 2.2E-46 T 15-10-2018 XDD1_0530 03450414787185734cb5c2740ef91da7 286 SUPERFAMILY SSF53383 3 286 3.58E-93 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XDD1_0530 03450414787185734cb5c2740ef91da7 286 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 3 286 3.9E-111 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XDD1_0530 03450414787185734cb5c2740ef91da7 286 Gene3D G3DSA:3.90.1150.10 153 286 4.0E-52 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XDD1_0530 03450414787185734cb5c2740ef91da7 286 Gene3D G3DSA:3.40.640.10 1 152 5.3E-55 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XDD1_0727 e624857882bffd17e59a6c7316818d3d 133 SMART SM00749 70 133 1.3E-6 T 15-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria XDD1_0727 e624857882bffd17e59a6c7316818d3d 133 Pfam PF04972 BON domain 65 132 1.1E-19 T 15-10-2018 IPR007055 BON domain XDD1_0189 970ee33a386150b3a662c81685865065 411 SUPERFAMILY SSF103473 21 406 1.29E-54 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0189 970ee33a386150b3a662c81685865065 411 Pfam PF07690 Major Facilitator Superfamily 32 364 2.8E-35 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0189 970ee33a386150b3a662c81685865065 411 Gene3D G3DSA:1.20.1720.10 25 399 6.4E-116 T 15-10-2018 XDD1_2904 7494fc22451d67bb05568085fba66403 39 Pfam PF06528 Phage P2 GpE 1 37 3.9E-21 T 15-10-2018 IPR009493 Burkholderia phage phiE202, Gp27 XDD1_0905 46f61614d974e93b3d362178391135af 109 SUPERFAMILY SSF82607 11 103 2.62E-36 T 15-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily XDD1_0905 46f61614d974e93b3d362178391135af 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.465 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family XDD1_0905 46f61614d974e93b3d362178391135af 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 4.3E-42 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family XDD1_0905 46f61614d974e93b3d362178391135af 109 PIRSF PIRSF004555 3 109 1.0E-39 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family XDD1_0905 46f61614d974e93b3d362178391135af 109 Gene3D G3DSA:3.30.1310.10 1 109 3.7E-48 T 15-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily XDD1_0905 46f61614d974e93b3d362178391135af 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 99 4.2E-35 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family XDD1_1688 fa3d02bfaa9024908847f637aacad6e5 182 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 18 160 1.9E-39 T 15-10-2018 IPR006433 Prohead protease XDD1_1688 fa3d02bfaa9024908847f637aacad6e5 182 Pfam PF04586 Caudovirus prohead serine protease 8 163 1.3E-46 T 15-10-2018 IPR006433 Prohead protease XDD1_1152 1ba36e7b26d9de42ab443756426a61ff 187 Pfam PF02325 YGGT family 109 171 1.8E-18 T 15-10-2018 IPR003425 CCB3/YggT GO:0016020 XDD1_1152 1ba36e7b26d9de42ab443756426a61ff 187 Pfam PF02325 YGGT family 10 79 6.0E-20 T 15-10-2018 IPR003425 CCB3/YggT GO:0016020 XDD1_2578 80e74468ad4268bf389fff546619478a 161 Pfam PF00691 OmpA family 58 152 3.8E-18 T 15-10-2018 IPR006665 OmpA-like domain XDD1_2578 80e74468ad4268bf389fff546619478a 161 Gene3D G3DSA:3.30.1330.60 24 160 3.1E-41 T 15-10-2018 IPR036737 OmpA-like domain superfamily XDD1_2578 80e74468ad4268bf389fff546619478a 161 SUPERFAMILY SSF103088 44 158 8.24E-33 T 15-10-2018 IPR036737 OmpA-like domain superfamily XDD1_2578 80e74468ad4268bf389fff546619478a 161 PRINTS PR01021 OMPA domain signature 58 80 1.4E-11 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XDD1_2578 80e74468ad4268bf389fff546619478a 161 PRINTS PR01021 OMPA domain signature 103 119 1.4E-11 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XDD1_2578 80e74468ad4268bf389fff546619478a 161 PRINTS PR01021 OMPA domain signature 88 103 1.4E-11 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XDD1_2320 169c5bf0b4dd2c970aca0c9b632f2420 158 Pfam PF04347 Flagellar biosynthesis protein, FliO 59 145 7.8E-22 T 15-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 XDD1_2320 169c5bf0b4dd2c970aca0c9b632f2420 158 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 47 116 7.4E-23 T 15-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 XDD1_3754 8238ad2359813e711ff245c57b2539b5 222 Pfam PF11319 Type VI secretion system VasI, EvfG, VC_A0118 43 222 1.3E-62 T 15-10-2018 IPR017738 Type VI secretion system-associated, VCA0118 XDD1_3754 8238ad2359813e711ff245c57b2539b5 222 TIGRFAM TIGR03360 VI_minor_1: type VI secretion-associated protein, VC_A0118 family 42 222 7.2E-60 T 15-10-2018 IPR017738 Type VI secretion system-associated, VCA0118 XDD1_1378 4e3229f766c3f870a8b7ceddf63876e1 527 SUPERFAMILY SSF110849 34 136 9.07E-10 T 15-10-2018 IPR036086 ParB/Sulfiredoxin superfamily XDD1_1378 4e3229f766c3f870a8b7ceddf63876e1 527 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 27 291 1.1E-116 T 15-10-2018 IPR022304 Integrating conjugative element, PFGI-1, ParB XDD1_2139 fbcbaea75df74f5b14ed0d567cbf0710 297 Gene3D G3DSA:3.40.190.10 163 256 2.6E-36 T 15-10-2018 XDD1_2139 fbcbaea75df74f5b14ed0d567cbf0710 297 SUPERFAMILY SSF46785 3 85 2.65E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_2139 fbcbaea75df74f5b14ed0d567cbf0710 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 9.9E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2139 fbcbaea75df74f5b14ed0d567cbf0710 297 Gene3D G3DSA:3.40.190.10 99 282 2.6E-36 T 15-10-2018 XDD1_2139 fbcbaea75df74f5b14ed0d567cbf0710 297 SUPERFAMILY SSF53850 94 288 8.51E-23 T 15-10-2018 XDD1_2139 fbcbaea75df74f5b14ed0d567cbf0710 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.5E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2139 fbcbaea75df74f5b14ed0d567cbf0710 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.5E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2139 fbcbaea75df74f5b14ed0d567cbf0710 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.5E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2139 fbcbaea75df74f5b14ed0d567cbf0710 297 Gene3D G3DSA:1.10.10.10 6 92 3.1E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2139 fbcbaea75df74f5b14ed0d567cbf0710 297 Pfam PF03466 LysR substrate binding domain 95 284 3.5E-17 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_0214 b94509967896a339eafe243ae8087034 161 Pfam PF04657 Putative inner membrane exporter, YdcZ 14 149 6.6E-38 T 15-10-2018 IPR006750 Putative inner membrane exporter, YdcZ XDD1_2825 e6d751e19e31908bc9412fc58648fadd 114 Pfam PF04355 SmpA / OmlA family 35 104 7.1E-27 T 15-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 XDD1_2825 e6d751e19e31908bc9412fc58648fadd 114 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 31.803 T 15-10-2018 IPR026592 Outer membrane protein assembly factor BamE XDD1_2825 e6d751e19e31908bc9412fc58648fadd 114 Gene3D G3DSA:3.30.1450.10 34 114 4.1E-30 T 15-10-2018 IPR037873 BamE-like XDD1_1081 d65957c97e70514855c091bd58d66ee4 94 SUPERFAMILY SSF47413 3 75 1.97E-30 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_1081 d65957c97e70514855c091bd58d66ee4 94 Pfam PF13693 Winged helix-turn-helix DNA-binding 9 81 3.8E-37 T 15-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain XDD1_1081 d65957c97e70514855c091bd58d66ee4 94 Gene3D G3DSA:1.10.260.40 3 74 1.5E-32 T 15-10-2018 XDD1_2502 2f9eac9e47415d19333bd143b5eb5420 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 75 4.2E-36 T 15-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 XDD1_2502 2f9eac9e47415d19333bd143b5eb5420 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 9.0E-17 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2502 2f9eac9e47415d19333bd143b5eb5420 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.432 T 15-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 XDD1_2502 2f9eac9e47415d19333bd143b5eb5420 78 SUPERFAMILY SSF47336 2 75 2.22E-22 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2502 2f9eac9e47415d19333bd143b5eb5420 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 75 0.003 T 15-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 XDD1_2502 2f9eac9e47415d19333bd143b5eb5420 78 Gene3D G3DSA:1.10.1200.10 2 78 1.3E-29 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2502 2f9eac9e47415d19333bd143b5eb5420 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site XDD1_0588 f856783574221a8369892bffcdc11eef 377 Pfam PF13265 Protein of unknown function (DUF4056) 47 307 8.7E-131 T 15-10-2018 IPR025130 Protein of unknown function DUF4056 XDD1_1042 63a741c8857fb84d6198ceb8df1b89ff 296 Pfam PF01261 Xylose isomerase-like TIM barrel 31 243 1.1E-24 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain XDD1_1042 63a741c8857fb84d6198ceb8df1b89ff 296 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 3 289 1.2E-129 T 15-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 XDD1_1042 63a741c8857fb84d6198ceb8df1b89ff 296 SUPERFAMILY SSF51658 5 287 9.3E-57 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily XDD1_1042 63a741c8857fb84d6198ceb8df1b89ff 296 Gene3D G3DSA:3.20.20.150 1 289 1.5E-73 T 15-10-2018 XDD1_3068 f5e49dbe8cbebf9dd12e0a5660085943 525 SMART SM00387 430 520 8.4E-9 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_3068 f5e49dbe8cbebf9dd12e0a5660085943 525 SUPERFAMILY SSF55874 407 517 1.14E-18 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_3068 f5e49dbe8cbebf9dd12e0a5660085943 525 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 434 518 3.7E-8 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_3068 f5e49dbe8cbebf9dd12e0a5660085943 525 Pfam PF05231 MASE1 11 282 3.9E-37 T 15-10-2018 IPR007895 MASE1 XDD1_3068 f5e49dbe8cbebf9dd12e0a5660085943 525 Gene3D G3DSA:3.30.565.10 389 523 2.3E-28 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_3068 f5e49dbe8cbebf9dd12e0a5660085943 525 Pfam PF07730 Histidine kinase 327 391 1.9E-12 T 15-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 XDD1_3654 e497f40fbacf9319253a1ad9374d22ea 138 Gene3D G3DSA:3.40.1260.10 4 138 9.0E-57 T 15-10-2018 IPR027396 DsrEFH-like XDD1_3654 e497f40fbacf9319253a1ad9374d22ea 138 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 11 138 41.077 T 15-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 XDD1_3654 e497f40fbacf9319253a1ad9374d22ea 138 SUPERFAMILY SSF75169 12 138 2.94E-37 T 15-10-2018 IPR027396 DsrEFH-like XDD1_3654 e497f40fbacf9319253a1ad9374d22ea 138 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 13 138 5.1E-54 T 15-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 XDD1_3654 e497f40fbacf9319253a1ad9374d22ea 138 Pfam PF02635 DsrE/DsrF-like family 13 138 3.5E-28 T 15-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein XDD1_1157 bcc6a9e7e1f6b475ffbbffab7a5f9a46 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.103 T 15-10-2018 IPR003774 Protein of unknown function UPF0301 XDD1_1157 bcc6a9e7e1f6b475ffbbffab7a5f9a46 187 Gene3D G3DSA:3.40.1740.10 1 187 1.6E-65 T 15-10-2018 XDD1_1157 bcc6a9e7e1f6b475ffbbffab7a5f9a46 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 2.3E-49 T 15-10-2018 IPR003774 Protein of unknown function UPF0301 XDD1_1157 bcc6a9e7e1f6b475ffbbffab7a5f9a46 187 SUPERFAMILY SSF143456 1 187 6.28E-65 T 15-10-2018 XDD1_3187 b390bcb46949b795f4864a81d98fc451 444 SUPERFAMILY SSF55920 164 439 3.4E-54 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like XDD1_3187 b390bcb46949b795f4864a81d98fc451 444 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 444 56.507 T 15-10-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 XDD1_3187 b390bcb46949b795f4864a81d98fc451 444 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 336 348 - T 15-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site XDD1_3187 b390bcb46949b795f4864a81d98fc451 444 Gene3D G3DSA:3.40.350.10 1 160 9.4E-61 T 15-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal XDD1_3187 b390bcb46949b795f4864a81d98fc451 444 Pfam PF00557 Metallopeptidase family M24 169 431 5.6E-44 T 15-10-2018 IPR000994 Peptidase M24 XDD1_3187 b390bcb46949b795f4864a81d98fc451 444 Gene3D G3DSA:3.90.230.10 162 444 1.9E-76 T 15-10-2018 XDD1_2087 cfc6b0147a8063c92535b9042564c8ea 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 7.1E-112 T 15-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 XDD1_2087 cfc6b0147a8063c92535b9042564c8ea 270 Gene3D G3DSA:3.40.50.300 1 260 4.8E-75 T 15-10-2018 XDD1_2087 cfc6b0147a8063c92535b9042564c8ea 270 SUPERFAMILY SSF52540 1 268 3.02E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2087 cfc6b0147a8063c92535b9042564c8ea 270 PIRSF PIRSF003092 1 270 6.0E-97 T 15-10-2018 IPR025501 ATP binding protein MinD XDD1_2087 cfc6b0147a8063c92535b9042564c8ea 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 227 6.2E-20 T 15-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain XDD1_1085 d730c99500d3fa93578a6646488b868c 687 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 180 225 1.0E-4 T 15-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain XDD1_1085 d730c99500d3fa93578a6646488b868c 687 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 652 0.0 T 15-10-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 XDD1_1085 d730c99500d3fa93578a6646488b868c 687 Pfam PF12696 TraM recognition site of TraD and TraG 505 631 3.2E-11 T 15-10-2018 IPR032689 TraD/TraG, TraM recognition site XDD1_1085 d730c99500d3fa93578a6646488b868c 687 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 652 1.0E-264 T 15-10-2018 IPR022458 Conjugative coupling factor TraG/TraD XDD1_1085 d730c99500d3fa93578a6646488b868c 687 Gene3D G3DSA:3.40.50.300 143 248 1.2E-10 T 15-10-2018 XDD1_1085 d730c99500d3fa93578a6646488b868c 687 Gene3D G3DSA:3.40.50.300 423 655 1.2E-26 T 15-10-2018 XDD1_1085 d730c99500d3fa93578a6646488b868c 687 SUPERFAMILY SSF52540 144 651 1.4E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3523 88fbf186989667b6e1867d317b29b590 330 Gene3D G3DSA:3.10.580.10 203 327 4.6E-43 T 15-10-2018 XDD1_3523 88fbf186989667b6e1867d317b29b590 330 PIRSF PIRSF004692 3 330 5.7E-132 T 15-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 XDD1_3523 88fbf186989667b6e1867d317b29b590 330 Gene3D G3DSA:3.40.50.10490 11 202 2.3E-64 T 15-10-2018 XDD1_3523 88fbf186989667b6e1867d317b29b590 330 Pfam PF01380 SIS domain 47 179 2.4E-33 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XDD1_3523 88fbf186989667b6e1867d317b29b590 330 Pfam PF00571 CBS domain 209 263 5.1E-5 T 15-10-2018 IPR000644 CBS domain XDD1_3523 88fbf186989667b6e1867d317b29b590 330 Pfam PF00571 CBS domain 276 327 2.2E-5 T 15-10-2018 IPR000644 CBS domain XDD1_3523 88fbf186989667b6e1867d317b29b590 330 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 52 320 2.7E-120 T 15-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 XDD1_3523 88fbf186989667b6e1867d317b29b590 330 SUPERFAMILY SSF53697 16 327 6.9E-68 T 15-10-2018 XDD1_1975 555a803c16a947d66503ba4df3fca33d 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 3.8E-97 T 15-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 XDD1_1975 555a803c16a947d66503ba4df3fca33d 335 PIRSF PIRSF000267 2 335 3.8E-88 T 15-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 XDD1_1975 555a803c16a947d66503ba4df3fca33d 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 213 7.4E-45 T 15-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 XDD1_0444 a98a21ec6b0fde549eaabe6d90532ef2 60 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 3 60 1.6E-10 T 15-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 XDD1_0444 a98a21ec6b0fde549eaabe6d90532ef2 60 Gene3D G3DSA:3.30.920.30 1 60 6.8E-7 T 15-10-2018 IPR038570 HicA superfamily XDD1_0444 a98a21ec6b0fde549eaabe6d90532ef2 60 SUPERFAMILY SSF54786 1 60 2.98E-11 T 15-10-2018 XDD1_3208 f6fbd15fe23ec7ce54eff56818d41d1c 259 PIRSF PIRSF006241 1 259 1.1E-88 T 15-10-2018 IPR026040 Hydroxypyruvate isomerase-like XDD1_3208 f6fbd15fe23ec7ce54eff56818d41d1c 259 SUPERFAMILY SSF51658 1 256 3.45E-80 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily XDD1_3208 f6fbd15fe23ec7ce54eff56818d41d1c 259 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 1.8E-32 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain XDD1_3208 f6fbd15fe23ec7ce54eff56818d41d1c 259 Gene3D G3DSA:3.20.20.150 1 258 1.3E-73 T 15-10-2018 XDD1_0013 0efd845f9ce1c0ace0c11d2918e6381d 1649 Gene3D G3DSA:3.40.50.300 1284 1439 3.3E-11 T 15-10-2018 XDD1_0013 0efd845f9ce1c0ace0c11d2918e6381d 1649 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 1292 1337 1.4E-4 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_0013 0efd845f9ce1c0ace0c11d2918e6381d 1649 Pfam PF12458 ATPase involved in DNA repair 38 485 3.9E-200 T 15-10-2018 IPR020958 Domain of unknown function DUF3686 XDD1_0013 0efd845f9ce1c0ace0c11d2918e6381d 1649 SUPERFAMILY SSF52540 1276 1437 1.6E-14 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2937 c9da25421f74af6eadd87631612d9ed0 117 SUPERFAMILY SSF50249 10 116 2.69E-28 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_2937 c9da25421f74af6eadd87631612d9ed0 117 Pfam PF01588 Putative tRNA binding domain 19 115 1.7E-16 T 15-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 XDD1_2937 c9da25421f74af6eadd87631612d9ed0 117 Gene3D G3DSA:2.40.50.140 5 117 3.8E-31 T 15-10-2018 XDD1_2937 c9da25421f74af6eadd87631612d9ed0 117 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 12 116 1.8E-41 T 15-10-2018 IPR008231 Probable chaperone CsaA XDD1_3651 dffe0a6ffd7438c68f99ed7530476c7e 124 PIRSF PIRSF002133 1 124 1.2E-53 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_3651 dffe0a6ffd7438c68f99ed7530476c7e 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.6E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_3651 dffe0a6ffd7438c68f99ed7530476c7e 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.6E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_3651 dffe0a6ffd7438c68f99ed7530476c7e 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.6E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_3651 dffe0a6ffd7438c68f99ed7530476c7e 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.6E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_3651 dffe0a6ffd7438c68f99ed7530476c7e 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.6E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_3651 dffe0a6ffd7438c68f99ed7530476c7e 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.6E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_3651 dffe0a6ffd7438c68f99ed7530476c7e 124 Gene3D G3DSA:2.40.50.140 1 124 4.4E-63 T 15-10-2018 XDD1_3651 dffe0a6ffd7438c68f99ed7530476c7e 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_3651 dffe0a6ffd7438c68f99ed7530476c7e 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 3.4E-42 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_3651 dffe0a6ffd7438c68f99ed7530476c7e 124 SUPERFAMILY SSF50249 3 123 1.11E-51 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_3651 dffe0a6ffd7438c68f99ed7530476c7e 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 1.6E-70 T 15-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3651 dffe0a6ffd7438c68f99ed7530476c7e 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.811 T 15-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_2465 1ab0f21b2ec6f612936a02adde372a35 457 Gene3D G3DSA:1.20.1740.10 11 457 8.0E-60 T 15-10-2018 XDD1_2465 1ab0f21b2ec6f612936a02adde372a35 457 Pfam PF00324 Amino acid permease 19 451 7.9E-119 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 XDD1_2465 1ab0f21b2ec6f612936a02adde372a35 457 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 15-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 XDD1_2465 1ab0f21b2ec6f612936a02adde372a35 457 PIRSF PIRSF006060 1 456 3.7E-81 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XDD1_0520 735c247b1bd6c300bcebf1829280b499 233 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 216 9.8E-25 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_0520 735c247b1bd6c300bcebf1829280b499 233 SUPERFAMILY SSF161098 14 211 2.88E-47 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_0520 735c247b1bd6c300bcebf1829280b499 233 Gene3D G3DSA:1.10.3720.10 8 220 3.0E-55 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_0520 735c247b1bd6c300bcebf1829280b499 233 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 2.4E-30 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 XDD1_0109 00b62ea73cc8b4567310df7a8aa082c4 275 Gene3D G3DSA:3.30.420.470 71 268 5.0E-12 T 15-10-2018 XDD1_0109 00b62ea73cc8b4567310df7a8aa082c4 275 Pfam PF13592 Winged helix-turn helix 26 81 1.4E-19 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_0109 00b62ea73cc8b4567310df7a8aa082c4 275 SUPERFAMILY SSF53098 148 248 6.68E-8 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0109 00b62ea73cc8b4567310df7a8aa082c4 275 Pfam PF13358 DDE superfamily endonuclease 95 239 1.6E-36 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_3763 57bb865b90ede3177f81bb58d6d2a3c4 146 Gene3D G3DSA:3.10.450.40 20 140 6.9E-9 T 15-10-2018 XDD1_3763 57bb865b90ede3177f81bb58d6d2a3c4 146 SUPERFAMILY SSF160719 32 137 8.11E-18 T 15-10-2018 XDD1_3763 57bb865b90ede3177f81bb58d6d2a3c4 146 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 13 141 2.6E-39 T 15-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein XDD1_3763 57bb865b90ede3177f81bb58d6d2a3c4 146 Pfam PF04965 Gene 25-like lysozyme 34 121 2.7E-17 T 15-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD XDD1_2193 ec0281c9d847578c4e489887cfdca5e0 234 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 28.315 T 15-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 XDD1_2193 ec0281c9d847578c4e489887cfdca5e0 234 PIRSF PIRSF006102 1 219 3.2E-78 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 XDD1_2193 ec0281c9d847578c4e489887cfdca5e0 234 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 208 1.2E-85 T 15-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 XDD1_2193 ec0281c9d847578c4e489887cfdca5e0 234 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 199 5.0E-65 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 XDD1_0398 9f2048738371b06bb3fbd04a6004381c 326 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 30 307 48.123 T 15-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 XDD1_0398 9f2048738371b06bb3fbd04a6004381c 326 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 69 305 8.2E-91 T 15-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 XDD1_0398 9f2048738371b06bb3fbd04a6004381c 326 Pfam PF02666 Phosphatidylserine decarboxylase 83 303 1.5E-57 T 15-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 XDD1_2645 a0e8fcc99ae092aa854b990e59b2a14e 221 SMART SM00448 1 112 1.8E-40 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_2645 a0e8fcc99ae092aa854b990e59b2a14e 221 SMART SM00862 144 217 8.4E-18 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XDD1_2645 a0e8fcc99ae092aa854b990e59b2a14e 221 SUPERFAMILY SSF46894 129 218 1.08E-17 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XDD1_2645 a0e8fcc99ae092aa854b990e59b2a14e 221 Pfam PF00072 Response regulator receiver domain 4 113 1.3E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XDD1_2645 a0e8fcc99ae092aa854b990e59b2a14e 221 Gene3D G3DSA:3.40.50.2300 1 121 1.6E-40 T 15-10-2018 XDD1_2645 a0e8fcc99ae092aa854b990e59b2a14e 221 Gene3D G3DSA:1.10.10.10 134 220 2.3E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2645 a0e8fcc99ae092aa854b990e59b2a14e 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 217 1.2E-17 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XDD1_2645 a0e8fcc99ae092aa854b990e59b2a14e 221 SUPERFAMILY SSF52172 1 129 4.41E-39 T 15-10-2018 IPR011006 CheY-like superfamily XDD1_1361 e87ff8698f949b7d5707b84794e31522 275 Pfam PF02517 CAAX protease self-immunity 169 260 5.6E-19 T 15-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 XDD1_1592 b191ed1545fd03a95eb9ff15da604af0 466 SUPERFAMILY SSF50249 16 101 7.81E-18 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold XDD1_1592 b191ed1545fd03a95eb9ff15da604af0 466 Gene3D G3DSA:3.30.930.10 109 465 2.3E-110 T 15-10-2018 XDD1_1592 b191ed1545fd03a95eb9ff15da604af0 466 SUPERFAMILY SSF55681 103 464 8.56E-96 T 15-10-2018 XDD1_1592 b191ed1545fd03a95eb9ff15da604af0 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 9.2E-83 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_1592 b191ed1545fd03a95eb9ff15da604af0 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 1.1E-206 T 15-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 XDD1_1592 b191ed1545fd03a95eb9ff15da604af0 466 Gene3D G3DSA:2.40.50.140 3 105 2.4E-20 T 15-10-2018 XDD1_1592 b191ed1545fd03a95eb9ff15da604af0 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 2.0E-11 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 XDD1_1592 b191ed1545fd03a95eb9ff15da604af0 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.654 T 15-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 XDD1_1592 b191ed1545fd03a95eb9ff15da604af0 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 2.3E-14 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_1592 b191ed1545fd03a95eb9ff15da604af0 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 2.3E-14 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_1592 b191ed1545fd03a95eb9ff15da604af0 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 2.3E-14 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_1592 b191ed1545fd03a95eb9ff15da604af0 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 2.3E-14 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XDD1_3751 4a28edfc74b29d7f57b94d15c649a785 454 Pfam PF06812 ImpA, N-terminal, type VI secretion system 13 111 2.9E-18 T 15-10-2018 IPR010657 ImpA, N-terminal XDD1_3751 4a28edfc74b29d7f57b94d15c649a785 454 Pfam PF12486 Type VI secretion system, EvfB, or VasL 288 434 5.6E-54 T 15-10-2018 IPR021069 ImpA, C-terminal XDD1_3476 ba93f358df97848c790eb5793ec8ee4f 389 SUPERFAMILY SSF103473 14 381 6.8E-37 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_3476 ba93f358df97848c790eb5793ec8ee4f 389 Pfam PF07690 Major Facilitator Superfamily 16 341 1.1E-22 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_3476 ba93f358df97848c790eb5793ec8ee4f 389 Gene3D G3DSA:1.20.1250.20 9 195 1.8E-17 T 15-10-2018 XDD1_3476 ba93f358df97848c790eb5793ec8ee4f 389 Gene3D G3DSA:1.20.1250.20 204 384 1.8E-11 T 15-10-2018 XDD1_2122 b93e07f71c3ae2f66d8cce958c0758fa 336 SUPERFAMILY SSF56349 151 334 1.74E-45 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XDD1_2122 b93e07f71c3ae2f66d8cce958c0758fa 336 Gene3D G3DSA:1.10.150.130 47 133 7.0E-6 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal XDD1_2122 b93e07f71c3ae2f66d8cce958c0758fa 336 Gene3D G3DSA:1.10.443.10 145 336 7.9E-41 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XDD1_2122 b93e07f71c3ae2f66d8cce958c0758fa 336 Pfam PF00589 Phage integrase family 153 321 3.5E-29 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XDD1_2122 b93e07f71c3ae2f66d8cce958c0758fa 336 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 56 117 3.1E-6 T 15-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 XDD1_0933 4702c011127c937939a8503fb100cb7e 815 SUPERFAMILY SSF56059 545 728 8.08E-23 T 15-10-2018 XDD1_0933 4702c011127c937939a8503fb100cb7e 815 Gene3D G3DSA:3.30.470.20 113 418 9.4E-54 T 15-10-2018 XDD1_0933 4702c011127c937939a8503fb100cb7e 815 Gene3D G3DSA:3.30.470.20 521 814 2.7E-47 T 15-10-2018 XDD1_0933 4702c011127c937939a8503fb100cb7e 815 Pfam PF13535 ATP-grasp domain 569 700 8.5E-12 T 15-10-2018 XDD1_0933 4702c011127c937939a8503fb100cb7e 815 Pfam PF13535 ATP-grasp domain 150 297 7.9E-25 T 15-10-2018 XDD1_0933 4702c011127c937939a8503fb100cb7e 815 SUPERFAMILY SSF56059 149 320 9.6E-28 T 15-10-2018 XDD1_1437 9212aecbe5572e1b63acdd82bbe7b210 444 SUPERFAMILY SSF103473 68 437 6.93E-23 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1437 9212aecbe5572e1b63acdd82bbe7b210 444 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 76 433 3.5E-80 T 15-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB XDD1_1437 9212aecbe5572e1b63acdd82bbe7b210 444 Gene3D G3DSA:1.20.1250.20 58 250 2.7E-8 T 15-10-2018 XDD1_2420 6ccc14b5a669c985c668f1fa4da2c3dc 156 PIRSF PIRSF000239 1 143 8.7E-19 T 15-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XDD1_2420 6ccc14b5a669c985c668f1fa4da2c3dc 156 Pfam PF00578 AhpC/TSA family 8 135 3.8E-38 T 15-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XDD1_2420 6ccc14b5a669c985c668f1fa4da2c3dc 156 SUPERFAMILY SSF52833 5 155 2.74E-50 T 15-10-2018 IPR036249 Thioredoxin-like superfamily XDD1_2420 6ccc14b5a669c985c668f1fa4da2c3dc 156 Gene3D G3DSA:3.40.30.10 4 156 9.0E-49 T 15-10-2018 XDD1_0360 a30d9625ec8b1e00498d7a0392351894 401 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 388 6.9E-109 T 15-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 XDD1_0360 a30d9625ec8b1e00498d7a0392351894 401 SUPERFAMILY SSF48452 97 386 4.19E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_0360 a30d9625ec8b1e00498d7a0392351894 401 Gene3D G3DSA:1.25.40.10 312 399 3.8E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_0360 a30d9625ec8b1e00498d7a0392351894 401 Pfam PF07219 HemY protein N-terminus 26 133 3.7E-26 T 15-10-2018 IPR010817 HemY, N-terminal XDD1_0445 a1cb544bf370efcec78560c9d66bf952 226 SUPERFAMILY SSF55068 20 220 1.06E-78 T 15-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XDD1_0445 a1cb544bf370efcec78560c9d66bf952 226 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 55 217 37.87 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XDD1_0445 a1cb544bf370efcec78560c9d66bf952 226 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 56 211 5.4E-66 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XDD1_0445 a1cb544bf370efcec78560c9d66bf952 226 Pfam PF01625 Peptide methionine sulfoxide reductase 58 211 1.3E-63 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XDD1_0445 a1cb544bf370efcec78560c9d66bf952 226 Gene3D G3DSA:3.30.1060.10 17 226 5.9E-85 T 15-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XDD1_1647 a31f322dbc84222643c28d7ccb5e25b2 117 Pfam PF05119 Phage terminase, small subunit 15 109 2.0E-20 T 15-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family XDD1_1647 a31f322dbc84222643c28d7ccb5e25b2 117 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 6 110 1.0E-18 T 15-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family XDD1_0712 1dd48eff9c1e31a755d69e204347f1a1 427 PRINTS PR00173 Glutamate-aspartate symporter signature 50 70 7.9E-39 T 15-10-2018 XDD1_0712 1dd48eff9c1e31a755d69e204347f1a1 427 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 7.9E-39 T 15-10-2018 XDD1_0712 1dd48eff9c1e31a755d69e204347f1a1 427 PRINTS PR00173 Glutamate-aspartate symporter signature 198 217 7.9E-39 T 15-10-2018 XDD1_0712 1dd48eff9c1e31a755d69e204347f1a1 427 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 7.9E-39 T 15-10-2018 XDD1_0712 1dd48eff9c1e31a755d69e204347f1a1 427 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 7.9E-39 T 15-10-2018 XDD1_0712 1dd48eff9c1e31a755d69e204347f1a1 427 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 7.9E-39 T 15-10-2018 XDD1_0712 1dd48eff9c1e31a755d69e204347f1a1 427 PRINTS PR00173 Glutamate-aspartate symporter signature 80 105 7.9E-39 T 15-10-2018 XDD1_0712 1dd48eff9c1e31a755d69e204347f1a1 427 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 7.9E-39 T 15-10-2018 XDD1_0712 1dd48eff9c1e31a755d69e204347f1a1 427 Pfam PF00375 Sodium:dicarboxylate symporter family 6 405 4.5E-107 T 15-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 XDD1_0712 1dd48eff9c1e31a755d69e204347f1a1 427 Gene3D G3DSA:1.10.3860.10 1 421 1.9E-119 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XDD1_0712 1dd48eff9c1e31a755d69e204347f1a1 427 SUPERFAMILY SSF118215 6 407 2.22E-110 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XDD1_1231 abff5c5c52a0e76198744a8c1523d8e8 452 Gene3D G3DSA:3.30.870.10 19 448 7.4E-177 T 15-10-2018 XDD1_1231 abff5c5c52a0e76198744a8c1523d8e8 452 Gene3D G3DSA:3.30.870.10 25 233 7.4E-177 T 15-10-2018 XDD1_1231 abff5c5c52a0e76198744a8c1523d8e8 452 Pfam PF13091 PLD-like domain 257 396 3.6E-20 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 XDD1_1231 abff5c5c52a0e76198744a8c1523d8e8 452 PIRSF PIRSF000850 1 452 4.6E-237 T 15-10-2018 XDD1_1231 abff5c5c52a0e76198744a8c1523d8e8 452 SUPERFAMILY SSF56024 253 394 2.22E-19 T 15-10-2018 XDD1_1231 abff5c5c52a0e76198744a8c1523d8e8 452 SMART SM00155 134 160 0.011 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 XDD1_1231 abff5c5c52a0e76198744a8c1523d8e8 452 SMART SM00155 353 380 0.016 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 XDD1_1231 abff5c5c52a0e76198744a8c1523d8e8 452 SUPERFAMILY SSF56024 8 195 7.22E-25 T 15-10-2018 XDD1_3705 6d693c47bf26f372b9c281054ae5722a 726 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 3 698 1.3E-177 T 15-10-2018 IPR017731 Type VI secretion system, IcmF XDD1_3705 6d693c47bf26f372b9c281054ae5722a 726 SUPERFAMILY SSF52540 62 247 1.09E-6 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3705 6d693c47bf26f372b9c281054ae5722a 726 Pfam PF06761 Intracellular multiplication and human macrophage-killing 455 702 1.6E-57 T 15-10-2018 IPR009612 ImcF-related XDD1_3705 6d693c47bf26f372b9c281054ae5722a 726 Pfam PF14331 ImcF-related N-terminal domain 150 401 2.6E-71 T 15-10-2018 IPR025743 ImcF-related, N-terminal domain XDD1_1856 b09c5e49fadf17d651ddb2f53920910d 302 Pfam PF03466 LysR substrate binding domain 88 290 1.6E-26 T 15-10-2018 IPR005119 LysR, substrate-binding XDD1_1856 b09c5e49fadf17d651ddb2f53920910d 302 SUPERFAMILY SSF53850 88 290 3.53E-30 T 15-10-2018 XDD1_1856 b09c5e49fadf17d651ddb2f53920910d 302 SUPERFAMILY SSF46785 6 88 1.86E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_1856 b09c5e49fadf17d651ddb2f53920910d 302 Gene3D G3DSA:1.10.10.10 3 89 1.7E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_1856 b09c5e49fadf17d651ddb2f53920910d 302 Gene3D G3DSA:3.40.190.10 168 264 1.9E-14 T 15-10-2018 XDD1_1856 b09c5e49fadf17d651ddb2f53920910d 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.6E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_1856 b09c5e49fadf17d651ddb2f53920910d 302 Gene3D G3DSA:3.40.190.10 92 286 1.9E-14 T 15-10-2018 XDD1_3810 46b9f5149f42f529b114ade16d6f46f7 594 Pfam PF05170 AsmA family 2 522 1.9E-9 T 15-10-2018 IPR007844 AsmA XDD1_0624 1b5d49a0245f0f1cedd2a605717d761d 342 Pfam PF03741 Integral membrane protein TerC family 73 299 6.5E-44 T 15-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 XDD1_0624 1b5d49a0245f0f1cedd2a605717d761d 342 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 10 337 2.3E-107 T 15-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 XDD1_1830 0c4441f8c7fc3fb55f371625b4d619e0 143 Pfam PF14568 SMI1-KNR4 cell-wall 29 135 4.8E-16 T 15-10-2018 XDD1_1830 0c4441f8c7fc3fb55f371625b4d619e0 143 SMART SM00860 25 137 7.5E-5 T 15-10-2018 IPR018958 Knr4/Smi1-like domain XDD1_1830 0c4441f8c7fc3fb55f371625b4d619e0 143 SUPERFAMILY SSF160631 1 139 9.94E-29 T 15-10-2018 XDD1_1830 0c4441f8c7fc3fb55f371625b4d619e0 143 Gene3D G3DSA:3.40.1580.10 5 143 1.7E-21 T 15-10-2018 IPR037883 Knr4/Smi1-like domain superfamily XDD1_1838 0c4441f8c7fc3fb55f371625b4d619e0 143 Pfam PF14568 SMI1-KNR4 cell-wall 29 135 4.8E-16 T 15-10-2018 XDD1_1838 0c4441f8c7fc3fb55f371625b4d619e0 143 SMART SM00860 25 137 7.5E-5 T 15-10-2018 IPR018958 Knr4/Smi1-like domain XDD1_1838 0c4441f8c7fc3fb55f371625b4d619e0 143 SUPERFAMILY SSF160631 1 139 9.94E-29 T 15-10-2018 XDD1_1838 0c4441f8c7fc3fb55f371625b4d619e0 143 Gene3D G3DSA:3.40.1580.10 5 143 1.7E-21 T 15-10-2018 IPR037883 Knr4/Smi1-like domain superfamily XDD1_0393 78007099c7e2e31706fe0ace90c9d2b0 260 Gene3D G3DSA:2.60.120.620 12 253 2.8E-6 T 15-10-2018 XDD1_0393 78007099c7e2e31706fe0ace90c9d2b0 260 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 131 247 9.2E-9 T 15-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 XDD1_0403 fbe88792d0c02f70fd956028a16bcf69 414 SUPERFAMILY SSF103473 23 399 1.57E-49 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0403 fbe88792d0c02f70fd956028a16bcf69 414 Pfam PF07690 Major Facilitator Superfamily 36 363 1.1E-30 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0403 fbe88792d0c02f70fd956028a16bcf69 414 Gene3D G3DSA:1.20.1250.20 29 401 2.0E-37 T 15-10-2018 XDD1_2249 007db3a267fc2d05454ad700719794f8 183 Pfam PF00881 Nitroreductase family 8 161 4.9E-23 T 15-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 XDD1_2249 007db3a267fc2d05454ad700719794f8 183 Gene3D G3DSA:3.40.109.10 1 183 3.0E-42 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 XDD1_2249 007db3a267fc2d05454ad700719794f8 183 SUPERFAMILY SSF55469 1 180 8.11E-40 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 XDD1_2249 007db3a267fc2d05454ad700719794f8 183 PIRSF PIRSF000232 1 183 2.6E-64 T 15-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like XDD1_1377 833403453d25ebca7858c5862f913732 459 Pfam PF03796 DnaB-like helicase C terminal domain 192 449 5.9E-92 T 15-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 XDD1_1377 833403453d25ebca7858c5862f913732 459 Pfam PF00772 DnaB-like helicase N terminal domain 20 115 1.2E-28 T 15-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 XDD1_1377 833403453d25ebca7858c5862f913732 459 Gene3D G3DSA:1.10.860.10 11 171 6.1E-42 T 15-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal XDD1_1377 833403453d25ebca7858c5862f913732 459 SUPERFAMILY SSF48024 16 124 1.12E-31 T 15-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 XDD1_1377 833403453d25ebca7858c5862f913732 459 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 18 451 4.1E-141 T 15-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 XDD1_1377 833403453d25ebca7858c5862f913732 459 SUPERFAMILY SSF52540 190 443 1.31E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1377 833403453d25ebca7858c5862f913732 459 SMART SM00382 209 409 0.0015 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1377 833403453d25ebca7858c5862f913732 459 Gene3D G3DSA:3.40.50.300 172 454 4.3E-92 T 15-10-2018 XDD1_2604 2f4685d783397dc666cd618f0aaaab16 714 Gene3D G3DSA:3.40.50.10950 397 707 6.1E-135 T 15-10-2018 XDD1_2604 2f4685d783397dc666cd618f0aaaab16 714 Gene3D G3DSA:3.40.50.10750 528 681 6.1E-135 T 15-10-2018 XDD1_2604 2f4685d783397dc666cd618f0aaaab16 714 SUPERFAMILY SSF53659 391 708 1.36E-94 T 15-10-2018 XDD1_2604 2f4685d783397dc666cd618f0aaaab16 714 Gene3D G3DSA:3.40.50.300 5 209 7.7E-14 T 15-10-2018 XDD1_2604 2f4685d783397dc666cd618f0aaaab16 714 Pfam PF07085 DRTGG domain 232 343 5.5E-29 T 15-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 XDD1_2604 2f4685d783397dc666cd618f0aaaab16 714 SUPERFAMILY SSF75138 228 352 3.01E-25 T 15-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily XDD1_2604 2f4685d783397dc666cd618f0aaaab16 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 390 705 2.4E-126 T 15-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 XDD1_2604 2f4685d783397dc666cd618f0aaaab16 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 405 705 1.3E-135 T 15-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 XDD1_2604 2f4685d783397dc666cd618f0aaaab16 714 PIRSF PIRSF006107 1 713 0.0 T 15-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 XDD1_2604 2f4685d783397dc666cd618f0aaaab16 714 SUPERFAMILY SSF52540 3 239 1.81E-26 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2604 2f4685d783397dc666cd618f0aaaab16 714 Pfam PF13500 AAA domain 3 228 1.8E-46 T 15-10-2018 XDD1_2604 2f4685d783397dc666cd618f0aaaab16 714 Gene3D G3DSA:3.40.1390.20 224 364 4.4E-15 T 15-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily XDD1_2616 c60dd3b7c0e3bc94f652529bcb60e287 107 Pfam PF01710 Transposase 1 105 1.6E-22 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 XDD1_2616 c60dd3b7c0e3bc94f652529bcb60e287 107 SUPERFAMILY SSF46689 3 93 7.08E-5 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1416 b8e870aed4b6f0fec22741c61255919a 229 Pfam PF13936 Helix-turn-helix domain 3 45 3.8E-15 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_1416 b8e870aed4b6f0fec22741c61255919a 229 SUPERFAMILY SSF46689 5 116 5.5E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1871 8b3932dd639e8fb7d47d0c75ef24aca0 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 8.1E-20 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 XDD1_1871 8b3932dd639e8fb7d47d0c75ef24aca0 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 5.9E-16 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 XDD1_1871 8b3932dd639e8fb7d47d0c75ef24aca0 330 SUPERFAMILY SSF52540 3 265 1.36E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1871 8b3932dd639e8fb7d47d0c75ef24aca0 330 Pfam PF00005 ABC transporter 24 187 3.4E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1871 8b3932dd639e8fb7d47d0c75ef24aca0 330 SMART SM00382 32 235 9.7E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_1871 8b3932dd639e8fb7d47d0c75ef24aca0 330 Gene3D G3DSA:3.40.50.300 2 329 2.1E-75 T 15-10-2018 XDD1_3925 e04c49993f0f3c2a4361111ff0b9453c 547 Gene3D G3DSA:3.40.50.720 7 192 8.6E-67 T 15-10-2018 XDD1_3925 e04c49993f0f3c2a4361111ff0b9453c 547 SUPERFAMILY SSF48179 447 524 5.53E-17 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XDD1_3925 e04c49993f0f3c2a4361111ff0b9453c 547 SUPERFAMILY SSF48179 189 288 1.79E-27 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XDD1_3925 e04c49993f0f3c2a4361111ff0b9453c 547 SUPERFAMILY SSF51735 8 189 2.68E-52 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_3925 e04c49993f0f3c2a4361111ff0b9453c 547 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 10 186 9.4E-60 T 15-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 XDD1_3925 e04c49993f0f3c2a4361111ff0b9453c 547 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 447 523 2.0E-15 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 XDD1_3925 e04c49993f0f3c2a4361111ff0b9453c 547 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 190 287 9.8E-28 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 XDD1_3141 44a0113c8b7bb87bfbfba3bba4d4b981 157 Gene3D G3DSA:1.10.260.40 98 157 1.4E-5 T 15-10-2018 XDD1_3141 44a0113c8b7bb87bfbfba3bba4d4b981 157 SUPERFAMILY SSF47413 98 155 2.91E-6 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_2017 2a2d6de23899518343cf802f0937bd2b 385 SUPERFAMILY SSF49373 109 193 5.23E-8 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments XDD1_2017 2a2d6de23899518343cf802f0937bd2b 385 Gene3D G3DSA:2.60.40.10 110 210 3.4E-8 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_0092 3522fec0fc27fc4dc1fc2cddb6d1514e 109 Pfam PF10625 Universal stress protein B (UspB) 1 106 1.2E-51 T 15-10-2018 IPR019598 Universal stress protein B XDD1_2078 27ebba969921185e18dd21fae42e84af 124 SUPERFAMILY SSF103481 6 106 1.02E-17 T 15-10-2018 XDD1_2078 27ebba969921185e18dd21fae42e84af 124 Gene3D G3DSA:1.10.3730.20 1 110 6.8E-29 T 15-10-2018 XDD1_2078 27ebba969921185e18dd21fae42e84af 124 Pfam PF00893 Small Multidrug Resistance protein 3 94 4.0E-23 T 15-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 XDD1_3477 94bfae702825317435c9fb162655616f 151 SUPERFAMILY SSF55729 1 144 1.89E-25 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_3477 94bfae702825317435c9fb162655616f 151 Gene3D G3DSA:3.40.630.30 1 145 2.5E-34 T 15-10-2018 XDD1_3477 94bfae702825317435c9fb162655616f 151 Pfam PF13673 Acetyltransferase (GNAT) domain 50 128 2.0E-18 T 15-10-2018 IPR000182 GNAT domain XDD1_2140 a66ed76aac4734b29119ab8fb291777d 398 Pfam PF07690 Major Facilitator Superfamily 15 351 5.8E-41 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_2140 a66ed76aac4734b29119ab8fb291777d 398 Gene3D G3DSA:1.20.1250.20 8 386 9.6E-44 T 15-10-2018 XDD1_2140 a66ed76aac4734b29119ab8fb291777d 398 SUPERFAMILY SSF103473 4 386 2.62E-45 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0124 c24d07c63a7e827dcfdb98850a2eeee6 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 20.958 T 15-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0124 c24d07c63a7e827dcfdb98850a2eeee6 78 Gene3D G3DSA:2.30.170.40 2 78 5.3E-33 T 15-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0124 c24d07c63a7e827dcfdb98850a2eeee6 78 SUPERFAMILY SSF143800 2 77 1.1E-29 T 15-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0124 c24d07c63a7e827dcfdb98850a2eeee6 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 6.2E-27 T 15-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0124 c24d07c63a7e827dcfdb98850a2eeee6 78 Pfam PF00830 Ribosomal L28 family 3 62 2.9E-25 T 15-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_3718 5bcf9451f318ceb0341f5d687b5cb73d 125 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 59 109 5.7E-8 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 XDD1_1276 c1bb13bae8a8d180b39fc72d00ca5de8 194 Pfam PF04390 Lipopolysaccharide-assembly 47 171 4.4E-12 T 15-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 XDD1_1276 c1bb13bae8a8d180b39fc72d00ca5de8 194 Gene3D G3DSA:3.30.160.150 33 181 2.9E-56 T 15-10-2018 XDD1_1276 c1bb13bae8a8d180b39fc72d00ca5de8 194 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 18 176 25.678 T 15-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 XDD1_0038 2642fafacb0c5cb82a7ff6bec3d644f0 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.963 T 15-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 XDD1_0038 2642fafacb0c5cb82a7ff6bec3d644f0 156 SUPERFAMILY SSF81573 63 121 1.96E-15 T 15-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily XDD1_0038 2642fafacb0c5cb82a7ff6bec3d644f0 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 5.9E-38 T 15-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 XDD1_0038 2642fafacb0c5cb82a7ff6bec3d644f0 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 4.1E-58 T 15-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 XDD1_0038 2642fafacb0c5cb82a7ff6bec3d644f0 156 Gene3D G3DSA:1.20.5.620 62 122 5.7E-24 T 15-10-2018 XDD1_0503 3aca663601c73f158f2bf2966156bff3 247 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 246 31.685 T 15-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 XDD1_0503 3aca663601c73f158f2bf2966156bff3 247 Gene3D G3DSA:3.60.21.10 1 246 2.0E-48 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like XDD1_0503 3aca663601c73f158f2bf2966156bff3 247 SUPERFAMILY SSF56300 1 237 1.49E-41 T 15-10-2018 XDD1_0503 3aca663601c73f158f2bf2966156bff3 247 Pfam PF00149 Calcineurin-like phosphoesterase 1 195 4.5E-17 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 XDD1_2079 f4afc453c07e9bee4fb5726afc4c3abd 110 Gene3D G3DSA:1.10.3730.20 8 110 1.0E-25 T 15-10-2018 XDD1_2079 f4afc453c07e9bee4fb5726afc4c3abd 110 Pfam PF00893 Small Multidrug Resistance protein 12 100 2.3E-24 T 15-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 XDD1_2079 f4afc453c07e9bee4fb5726afc4c3abd 110 SUPERFAMILY SSF103481 12 109 1.29E-16 T 15-10-2018 XDD1_3792 83db4925d62a91b7cbe8aecadec04ce6 179 Gene3D G3DSA:1.10.340.30 6 177 4.0E-79 T 15-10-2018 XDD1_3792 83db4925d62a91b7cbe8aecadec04ce6 179 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 7 175 8.9E-77 T 15-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 XDD1_3792 83db4925d62a91b7cbe8aecadec04ce6 179 SUPERFAMILY SSF48150 6 175 9.42E-74 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 XDD1_3792 83db4925d62a91b7cbe8aecadec04ce6 179 Pfam PF03352 Methyladenine glycosylase 10 175 3.5E-74 T 15-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 XDD1_2171 9bf6870f58251207394cee62cc38ba0b 119 Pfam PF06932 Protein of unknown function (DUF1283) 36 119 9.3E-38 T 15-10-2018 IPR009700 Protein of unknown function DUF1283 XDD1_2171 9bf6870f58251207394cee62cc38ba0b 119 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 26 119 1.0E-29 T 15-10-2018 IPR009700 Protein of unknown function DUF1283 XDD1_0557 e4796a2b921762f5bfd7e5c6f555dbb9 81 SMART SM00966 7 52 1.2E-8 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 XDD1_0557 e4796a2b921762f5bfd7e5c6f555dbb9 81 SUPERFAMILY SSF89447 4 74 1.1E-18 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily XDD1_0557 e4796a2b921762f5bfd7e5c6f555dbb9 81 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 50 4.8E-10 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 XDD1_0557 e4796a2b921762f5bfd7e5c6f555dbb9 81 Gene3D G3DSA:2.10.260.10 1 80 2.7E-28 T 15-10-2018 XDD1_0354 5a15317e964ee7bbf1bb84633f9b08ea 416 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 39.375 T 15-10-2018 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 XDD1_0354 5a15317e964ee7bbf1bb84633f9b08ea 416 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 1.6E-14 T 15-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 XDD1_1330 a6ff8a8f45d8f74ad8cf90f8fe4f35da 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 29 1.6E-7 T 15-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 XDD1_1330 a6ff8a8f45d8f74ad8cf90f8fe4f35da 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 8.0E-8 T 15-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 XDD1_0181 0fb07487aae8e50c07aec5be5f6c82fb 299 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 287 3.8E-73 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 XDD1_0181 0fb07487aae8e50c07aec5be5f6c82fb 299 Gene3D G3DSA:1.20.1510.10 9 206 7.1E-63 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily XDD1_0181 0fb07487aae8e50c07aec5be5f6c82fb 299 SUPERFAMILY SSF160240 209 288 1.26E-25 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 XDD1_0181 0fb07487aae8e50c07aec5be5f6c82fb 299 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 4.7E-26 T 15-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain XDD1_0181 0fb07487aae8e50c07aec5be5f6c82fb 299 Gene3D G3DSA:3.30.70.1350 207 290 2.6E-33 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 XDD1_0181 0fb07487aae8e50c07aec5be5f6c82fb 299 SUPERFAMILY SSF161111 9 207 4.18E-49 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily XDD1_0181 0fb07487aae8e50c07aec5be5f6c82fb 299 Pfam PF01545 Cation efflux family 15 206 1.9E-42 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 XDD1_1363 85542b53dcc66e1059e51f5ed2bfeb1b 46 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 46 17.388 T 15-10-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 XDD1_1363 85542b53dcc66e1059e51f5ed2bfeb1b 46 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 41 5.1E-22 T 15-10-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 XDD1_2365 2f1162ad17e8e15fa8ce75c5aac13ac2 87 Pfam PF05488 PAAR motif 10 79 6.5E-21 T 15-10-2018 IPR008727 PAAR motif XDD1_2365 2f1162ad17e8e15fa8ce75c5aac13ac2 87 Gene3D G3DSA:2.60.200.60 19 86 1.3E-6 T 15-10-2018 XDD1_2178 4f493ee06ca0e896ed146560d26afb67 210 Gene3D G3DSA:2.60.120.1460 13 203 4.7E-9 T 15-10-2018 XDD1_2178 4f493ee06ca0e896ed146560d26afb67 210 SUPERFAMILY SSF51206 42 130 6.06E-7 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like XDD1_2178 4f493ee06ca0e896ed146560d26afb67 210 Pfam PF15977 Winged helix-turn-helix DNA binding 141 205 1.4E-24 T 15-10-2018 XDD1_0958 c25ad97b332dfa22e8e8d4802239429d 159 Pfam PF11033 Competence protein J (ComJ) 9 128 4.9E-18 T 15-10-2018 IPR020354 Competence, DNA-entry nuclease inhibitor, ComJ XDD1_0958 c25ad97b332dfa22e8e8d4802239429d 159 Gene3D G3DSA:2.60.34.30 2 136 1.0E-10 T 15-10-2018 IPR038691 DNA-entry nuclease inhibitor, ComJ superfamily XDD1_3258 83ce86ce48a28ac1579dcb7e5ed9715e 123 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 15-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 XDD1_3258 83ce86ce48a28ac1579dcb7e5ed9715e 123 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 3.0E-36 T 15-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 XDD1_3258 83ce86ce48a28ac1579dcb7e5ed9715e 123 Gene3D G3DSA:1.10.3830.10 2 122 3.1E-42 T 15-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 XDD1_3279 822abb6cbdd1e8e984061c63b32beb1f 217 Gene3D G3DSA:1.10.3720.10 1 217 1.5E-59 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_3279 822abb6cbdd1e8e984061c63b32beb1f 217 SUPERFAMILY SSF161098 9 201 1.31E-47 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_3279 822abb6cbdd1e8e984061c63b32beb1f 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 217 1.6E-22 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_3950 3c4a0692cd232aa2e09a097463e9c9b1 159 Gene3D G3DSA:2.30.110.20 2 158 9.8E-52 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_3950 3c4a0692cd232aa2e09a097463e9c9b1 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 156 2.3E-58 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_3950 3c4a0692cd232aa2e09a097463e9c9b1 159 Pfam PF05638 Type VI secretion system effector, Hcp 7 143 4.8E-22 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_3950 3c4a0692cd232aa2e09a097463e9c9b1 159 SUPERFAMILY SSF141452 4 158 7.45E-34 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_2858 e93044c5f647bd7044a580173dbb5cc6 343 Pfam PF04860 Phage portal protein 96 323 8.4E-9 T 15-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein XDD1_2858 e93044c5f647bd7044a580173dbb5cc6 343 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 55 323 4.7E-65 T 15-10-2018 IPR006430 Phage portal protein PBSX family XDD1_2858 e93044c5f647bd7044a580173dbb5cc6 343 PIRSF PIRSF018494 1 340 9.6E-141 T 15-10-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria XDD1_3238 89292af344288ed09130a8d7cab92a2b 100 Pfam PF05135 Phage gp6-like head-tail connector protein 8 95 6.6E-14 T 15-10-2018 IPR021146 Phage gp6-like head-tail connector protein XDD1_3238 89292af344288ed09130a8d7cab92a2b 100 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 8 98 3.8E-21 T 15-10-2018 IPR006450 Phage protein of unkonwn function XDD1_3238 89292af344288ed09130a8d7cab92a2b 100 Gene3D G3DSA:1.10.3230.30 2 98 3.1E-11 T 15-10-2018 XDD1_2441 e14153441b998dd2afd0eb193b309961 85 SUPERFAMILY SSF52540 3 77 1.8E-12 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2441 e14153441b998dd2afd0eb193b309961 85 Gene3D G3DSA:3.40.50.300 2 78 8.6E-12 T 15-10-2018 XDD1_0366 5ebfce2d410725e39acf8f2d05a00cfd 106 Pfam PF01491 Frataxin-like domain 1 101 4.6E-31 T 15-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 XDD1_0366 5ebfce2d410725e39acf8f2d05a00cfd 106 Gene3D G3DSA:3.30.920.10 1 106 3.1E-41 T 15-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 XDD1_0366 5ebfce2d410725e39acf8f2d05a00cfd 106 SMART SM01219 1 106 2.2E-56 T 15-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 XDD1_0366 5ebfce2d410725e39acf8f2d05a00cfd 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 8.8E-44 T 15-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 XDD1_0366 5ebfce2d410725e39acf8f2d05a00cfd 106 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 15-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 XDD1_0366 5ebfce2d410725e39acf8f2d05a00cfd 106 SUPERFAMILY SSF55387 1 105 1.1E-39 T 15-10-2018 XDD1_0366 5ebfce2d410725e39acf8f2d05a00cfd 106 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 105 28.992 T 15-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 XDD1_3968 c01c05b4b34cbdf70e9641d820f98257 490 Gene3D G3DSA:1.25.40.10 65 199 1.2E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_3968 c01c05b4b34cbdf70e9641d820f98257 490 SUPERFAMILY SSF48452 111 170 3.8E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_3968 c01c05b4b34cbdf70e9641d820f98257 490 Pfam PF04575 Protein of unknown function (DUF560) 198 490 2.4E-56 T 15-10-2018 IPR007655 Protein of unknown function DUF560 XDD1_2732 f081c939e1e5a0ba213d5d87d4779044 756 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 170 275 4.5E-8 T 15-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 XDD1_2732 f081c939e1e5a0ba213d5d87d4779044 756 SUPERFAMILY SSF51695 166 292 1.0E-15 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 XDD1_2732 f081c939e1e5a0ba213d5d87d4779044 756 Gene3D G3DSA:3.20.20.190 161 398 5.9E-14 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 XDD1_2241 d9ff79903c19c9f3b106656d604db3a8 304 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 7 276 1.6E-112 T 15-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 XDD1_2241 d9ff79903c19c9f3b106656d604db3a8 304 Gene3D G3DSA:3.90.550.10 2 302 1.5E-88 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_2241 d9ff79903c19c9f3b106656d604db3a8 304 SUPERFAMILY SSF53448 8 292 8.11E-62 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_2241 d9ff79903c19c9f3b106656d604db3a8 304 Pfam PF00483 Nucleotidyl transferase 9 277 1.4E-24 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 XDD1_0336 118af582a5f07cdb650eb27fee3391e4 264 Pfam PF12833 Helix-turn-helix domain 174 248 7.0E-13 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_0336 118af582a5f07cdb650eb27fee3391e4 264 SMART SM00342 166 248 6.0E-12 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XDD1_0336 118af582a5f07cdb650eb27fee3391e4 264 Gene3D G3DSA:1.10.10.60 146 252 4.1E-17 T 15-10-2018 XDD1_1189 86acb8bb6e52a85fc66099823800428a 158 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 40.994 T 15-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 XDD1_1189 86acb8bb6e52a85fc66099823800428a 158 Gene3D G3DSA:3.40.50.2020 1 152 4.2E-43 T 15-10-2018 XDD1_1189 86acb8bb6e52a85fc66099823800428a 158 Pfam PF00156 Phosphoribosyl transferase domain 14 143 6.3E-15 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 XDD1_1189 86acb8bb6e52a85fc66099823800428a 158 SUPERFAMILY SSF53271 4 145 3.8E-31 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like XDD1_3195 26deeb831478a43b50dfa3f3a19b2426 140 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 81 1.8E-28 T 15-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 XDD1_3195 26deeb831478a43b50dfa3f3a19b2426 140 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 7.4E-32 T 15-10-2018 XDD1_3195 26deeb831478a43b50dfa3f3a19b2426 140 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 7.4E-32 T 15-10-2018 XDD1_3195 26deeb831478a43b50dfa3f3a19b2426 140 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 7.4E-32 T 15-10-2018 XDD1_3195 26deeb831478a43b50dfa3f3a19b2426 140 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 134 18.796 T 15-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 XDD1_0822 94d204a1fb1b430a466a5239c0c9a986 405 Gene3D G3DSA:3.60.21.10 1 282 2.1E-91 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like XDD1_0822 94d204a1fb1b430a466a5239c0c9a986 405 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 283 379 1.4E-24 T 15-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain XDD1_0822 94d204a1fb1b430a466a5239c0c9a986 405 Pfam PF00149 Calcineurin-like phosphoesterase 1 233 4.1E-15 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 XDD1_0822 94d204a1fb1b430a466a5239c0c9a986 405 SUPERFAMILY SSF56300 1 342 3.07E-62 T 15-10-2018 XDD1_0822 94d204a1fb1b430a466a5239c0c9a986 405 Gene3D G3DSA:3.30.160.720 284 347 1.7E-26 T 15-10-2018 XDD1_0822 94d204a1fb1b430a466a5239c0c9a986 405 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 260 2.2E-76 T 15-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 XDD1_0142 e0f50f4134b8b12087fa16bf7e221bf1 305 SUPERFAMILY SSF56059 67 266 2.3E-5 T 15-10-2018 XDD1_0142 e0f50f4134b8b12087fa16bf7e221bf1 305 Gene3D G3DSA:3.30.470.20 61 228 5.3E-6 T 15-10-2018 XDD1_0142 e0f50f4134b8b12087fa16bf7e221bf1 305 Pfam PF14305 TupA-like ATPgrasp 47 294 5.6E-53 T 15-10-2018 IPR029465 TupA-like ATPgrasp protein XDD1_3278 44d3b940215e11d0d9ea972a56696778 343 SUPERFAMILY SSF52540 1 240 1.57E-84 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_3278 44d3b940215e11d0d9ea972a56696778 343 SMART SM00382 30 217 2.6E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_3278 44d3b940215e11d0d9ea972a56696778 343 Gene3D G3DSA:3.40.50.300 1 232 1.7E-76 T 15-10-2018 XDD1_3278 44d3b940215e11d0d9ea972a56696778 343 Pfam PF00005 ABC transporter 21 169 3.5E-36 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_3278 44d3b940215e11d0d9ea972a56696778 343 Pfam PF09383 NIL domain 268 339 1.1E-20 T 15-10-2018 IPR018449 NIL domain XDD1_3278 44d3b940215e11d0d9ea972a56696778 343 SMART SM00930 265 340 2.5E-24 T 15-10-2018 IPR018449 NIL domain XDD1_3278 44d3b940215e11d0d9ea972a56696778 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_3278 44d3b940215e11d0d9ea972a56696778 343 Gene3D G3DSA:3.30.70.260 233 343 1.1E-37 T 15-10-2018 XDD1_3278 44d3b940215e11d0d9ea972a56696778 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 1.1E-193 T 15-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 XDD1_3278 44d3b940215e11d0d9ea972a56696778 343 SUPERFAMILY SSF55021 248 343 8.47E-25 T 15-10-2018 XDD1_1147 f11d51ec73c4f895b4980f2000ff814e 264 Pfam PF14281 PD-(D/E)XK nuclease superfamily 74 232 1.1E-34 T 15-10-2018 IPR029470 PD-(D/E)XK nuclease superfamily 4 XDD1_2340 e834c84f52c0cf842e608d6025a7acae 225 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 90 223 2.1E-35 T 15-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal XDD1_2340 e834c84f52c0cf842e608d6025a7acae 225 Pfam PF13144 Chaperone for flagella basal body P-ring formation 32 223 4.7E-44 T 15-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal XDD1_2340 e834c84f52c0cf842e608d6025a7acae 225 Gene3D G3DSA:2.30.30.760 166 225 8.8E-22 T 15-10-2018 XDD1_0206 86f5ea392eba17be5108feb248cab8dd 456 Gene3D G3DSA:1.20.1250.20 251 448 3.1E-17 T 15-10-2018 XDD1_0206 86f5ea392eba17be5108feb248cab8dd 456 Gene3D G3DSA:1.20.1250.20 2 246 2.0E-39 T 15-10-2018 XDD1_0206 86f5ea392eba17be5108feb248cab8dd 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 131 155 8.3E-7 T 15-10-2018 XDD1_0206 86f5ea392eba17be5108feb248cab8dd 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 101 121 8.3E-7 T 15-10-2018 XDD1_0206 86f5ea392eba17be5108feb248cab8dd 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 10 34 8.3E-7 T 15-10-2018 XDD1_0206 86f5ea392eba17be5108feb248cab8dd 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 196 214 8.3E-7 T 15-10-2018 XDD1_0206 86f5ea392eba17be5108feb248cab8dd 456 Pfam PF07690 Major Facilitator Superfamily 12 235 5.9E-36 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0206 86f5ea392eba17be5108feb248cab8dd 456 Pfam PF07690 Major Facilitator Superfamily 278 436 2.2E-15 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0206 86f5ea392eba17be5108feb248cab8dd 456 SUPERFAMILY SSF103473 3 447 2.35E-59 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_2205 ed9f7daecf3568fa9efaddaec840ad7c 55 Pfam PF04299 Putative FMN-binding domain 8 45 1.6E-8 T 15-10-2018 IPR007396 Transcriptional regulator PAI 2-type XDD1_2205 ed9f7daecf3568fa9efaddaec840ad7c 55 Gene3D G3DSA:2.30.110.10 6 51 7.0E-9 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 XDD1_1185 9353f7f5338ff3c5bf3abe6e2b20442a 678 ProSitePatterns PS01303 BCCT family of transporters signature. 320 329 - T 15-10-2018 IPR018093 BCCT transporter, conserved site XDD1_1185 9353f7f5338ff3c5bf3abe6e2b20442a 678 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 19 503 1.4E-176 T 15-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 XDD1_1185 9353f7f5338ff3c5bf3abe6e2b20442a 678 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 57 504 9.7E-175 T 15-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 XDD1_3683 3636774f86777e1439dfd2053ee23b1a 129 Gene3D G3DSA:3.10.450.50 3 120 8.8E-6 T 15-10-2018 XDD1_3683 3636774f86777e1439dfd2053ee23b1a 129 SUPERFAMILY SSF54427 11 108 6.03E-7 T 15-10-2018 IPR032710 NTF2-like domain superfamily XDD1_3837 30bcb68c5a63fe0f58699b05bc8e5b0e 81 SUPERFAMILY SSF89447 1 69 1.01E-17 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily XDD1_3837 30bcb68c5a63fe0f58699b05bc8e5b0e 81 SMART SM00966 6 51 4.3E-11 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 XDD1_3837 30bcb68c5a63fe0f58699b05bc8e5b0e 81 Gene3D G3DSA:2.10.260.10 1 78 4.8E-19 T 15-10-2018 XDD1_3837 30bcb68c5a63fe0f58699b05bc8e5b0e 81 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 50 7.2E-12 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 XDD1_3638 410571a6701fb72c2b975210d2d45d02 316 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 79 211 2.7E-51 T 15-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 XDD1_1958 61f7e65900a97165e3c2526361032e4d 86 Pfam PF13586 Transposase DDE domain 27 81 2.6E-12 T 15-10-2018 IPR025668 Transposase DDE domain XDD1_2630 4464e4dd38c5ebb3ec8ed85af6802dff 452 Gene3D G3DSA:1.20.1740.10 5 452 9.1E-67 T 15-10-2018 XDD1_2630 4464e4dd38c5ebb3ec8ed85af6802dff 452 Pfam PF00324 Amino acid permease 15 450 9.0E-106 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 XDD1_2630 4464e4dd38c5ebb3ec8ed85af6802dff 452 PIRSF PIRSF006060 1 452 2.7E-72 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XDD1_2630 4464e4dd38c5ebb3ec8ed85af6802dff 452 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 15-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 XDD1_3037 75a915c6d6a59d427da1e7f9cbf3fd81 133 Pfam PF14564 Membrane binding 17 130 4.9E-29 T 15-10-2018 IPR029283 Calcium-dependent cell adhesion molecule 1, membrane-binding domain XDD1_3037 75a915c6d6a59d427da1e7f9cbf3fd81 133 Gene3D G3DSA:2.60.40.1720 12 132 2.1E-12 T 15-10-2018 IPR038423 Calcium-dependent cell adhesion molecule, C-terminal domain superfamily XDD1_3143 a202dd72c8fbaee6ca59093a18033b34 250 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 134 233 1.4E-13 T 15-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 XDD1_3143 a202dd72c8fbaee6ca59093a18033b34 250 PRINTS PR01399 Enterobactin synthetase component D signature 100 118 4.5E-16 T 15-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 XDD1_3143 a202dd72c8fbaee6ca59093a18033b34 250 PRINTS PR01399 Enterobactin synthetase component D signature 70 90 4.5E-16 T 15-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 XDD1_3143 a202dd72c8fbaee6ca59093a18033b34 250 PRINTS PR01399 Enterobactin synthetase component D signature 177 193 4.5E-16 T 15-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 XDD1_3143 a202dd72c8fbaee6ca59093a18033b34 250 Gene3D G3DSA:3.90.470.20 64 155 1.1E-7 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 XDD1_3143 a202dd72c8fbaee6ca59093a18033b34 250 SUPERFAMILY SSF56214 132 219 2.96E-13 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 XDD1_2855 9e37a1beb599dbb60974c2d8b252542e 175 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 7 155 4.4E-12 T 15-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 XDD1_1113 0b47f530238514de805b8245c406fe3b 139 Pfam PF08786 DcrB 10 135 4.2E-36 T 15-10-2018 IPR014894 Protein DcrB XDD1_1113 0b47f530238514de805b8245c406fe3b 139 SUPERFAMILY SSF55724 4 138 8.89E-41 T 15-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich XDD1_1113 0b47f530238514de805b8245c406fe3b 139 Gene3D G3DSA:3.40.1000.10 3 139 4.5E-39 T 15-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich XDD1_1878 49a2f6321b4e717c85c702d2065725ea 120 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 6 120 9.7E-37 T 15-10-2018 IPR014320 Phage shock protein, PspC XDD1_1878 49a2f6321b4e717c85c702d2065725ea 120 Pfam PF04024 PspC domain 7 64 9.4E-16 T 15-10-2018 IPR007168 Phage shock protein, PspC, N-terminal XDD1_3696 1bd5576fc627485c36575be3f1010c06 90 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 35 83 7.3E-7 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 XDD1_2575 ca24590405b0a5c5538b5c988e597a42 124 ProDom PD460230 MEMBRANE STORAGE INNER HAEMIN SYSTEM HMSS PGA BIOFILM PGAD TRANSMEMBRANE 1 118 6.0E-17 T 15-10-2018 XDD1_2575 ca24590405b0a5c5538b5c988e597a42 124 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 41 118 5.1E-21 T 15-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 XDD1_2575 ca24590405b0a5c5538b5c988e597a42 124 Pfam PF13994 PgaD-like protein 5 39 1.9E-6 T 15-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 XDD1_2575 ca24590405b0a5c5538b5c988e597a42 124 Pfam PF13994 PgaD-like protein 42 116 3.1E-23 T 15-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 XDD1_3218 088638c6cea526eb150a71bb8f7816d7 448 Pfam PF00860 Permease family 26 408 1.9E-78 T 15-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 XDD1_0655 791a6830e198f7b729137d2bbde5cb9e 439 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 37 59 7.6E-6 T 15-10-2018 XDD1_0655 791a6830e198f7b729137d2bbde5cb9e 439 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 169 184 7.6E-6 T 15-10-2018 XDD1_0655 791a6830e198f7b729137d2bbde5cb9e 439 SUPERFAMILY SSF51905 36 401 1.06E-38 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0655 791a6830e198f7b729137d2bbde5cb9e 439 Gene3D G3DSA:3.50.50.60 37 391 4.7E-51 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0655 791a6830e198f7b729137d2bbde5cb9e 439 Pfam PF01266 FAD dependent oxidoreductase 37 391 5.0E-36 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 XDD1_0655 791a6830e198f7b729137d2bbde5cb9e 439 Gene3D G3DSA:3.30.9.10 131 352 4.7E-51 T 15-10-2018 XDD1_1368 abd98ae34e9a888205d4070babed996f 271 SUPERFAMILY SSF56784 1 270 1.28E-66 T 15-10-2018 IPR036412 HAD-like superfamily XDD1_1368 abd98ae34e9a888205d4070babed996f 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 239 3.3E-24 T 15-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 XDD1_1368 abd98ae34e9a888205d4070babed996f 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 266 6.6E-65 T 15-10-2018 IPR000150 Cof family GO:0016787 XDD1_1368 abd98ae34e9a888205d4070babed996f 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 266 3.7E-62 T 15-10-2018 XDD1_1368 abd98ae34e9a888205d4070babed996f 271 Gene3D G3DSA:3.30.1240.10 84 195 2.0E-61 T 15-10-2018 XDD1_1368 abd98ae34e9a888205d4070babed996f 271 Gene3D G3DSA:3.40.50.1000 5 266 2.0E-61 T 15-10-2018 IPR023214 HAD superfamily XDD1_1368 abd98ae34e9a888205d4070babed996f 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 220 242 - T 15-10-2018 XDD1_0008 ef565c0644202cf9155b386f4406046f 242 Pfam PF00665 Integrase core domain 86 188 4.2E-13 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 XDD1_0008 ef565c0644202cf9155b386f4406046f 242 SUPERFAMILY SSF53098 84 234 7.28E-27 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0008 ef565c0644202cf9155b386f4406046f 242 Gene3D G3DSA:3.30.420.10 77 239 1.2E-10 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_0923 bc02bdc86809bb504923cf9e11012b31 153 SUPERFAMILY SSF141322 83 150 2.88E-7 T 15-10-2018 XDD1_0923 bc02bdc86809bb504923cf9e11012b31 153 SUPERFAMILY SSF103473 29 87 3.14E-5 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0923 bc02bdc86809bb504923cf9e11012b31 153 Gene3D G3DSA:2.40.50.140 81 152 7.8E-12 T 15-10-2018 XDD1_0923 bc02bdc86809bb504923cf9e11012b31 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 148 5.9E-27 T 15-10-2018 IPR002810 NfeD-like, C-terminal domain XDD1_0518 e91930c23cac97cd80725900da66492c 61 Pfam PF03591 AzlC protein 6 56 9.2E-9 T 15-10-2018 IPR011606 Branched-chain amino acid transport, permease XDD1_3775 30ef9521ae35990cbb5c81fa73192513 235 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 38 158 2.7E-53 T 15-10-2018 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 XDD1_3807 3e5ef735785056adcee60c7fae9e8262 376 ProSitePatterns PS00216 Sugar transport proteins signature 1. 60 76 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 XDD1_3807 3e5ef735785056adcee60c7fae9e8262 376 SUPERFAMILY SSF103473 4 375 4.97E-33 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_3807 3e5ef735785056adcee60c7fae9e8262 376 Pfam PF07690 Major Facilitator Superfamily 11 306 2.2E-12 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_3807 3e5ef735785056adcee60c7fae9e8262 376 Gene3D G3DSA:1.20.1250.20 2 373 1.3E-26 T 15-10-2018 XDD1_2893 368335d66ef7ca55cf23f902071d86b6 332 PIRSF PIRSF037196 1 322 4.6E-155 T 15-10-2018 IPR017133 Pyoverdine chromophore biosynthesis protein PvcA XDD1_2893 368335d66ef7ca55cf23f902071d86b6 332 Pfam PF05141 Pyoverdine/dityrosine biosynthesis protein 46 302 6.3E-82 T 15-10-2018 IPR007817 Pyoverdine biosynthesis XDD1_2893 368335d66ef7ca55cf23f902071d86b6 332 Gene3D G3DSA:3.30.60.140 279 323 6.3E-8 T 15-10-2018 XDD1_2182 99e3279cc00865eccb03c700bf9c360d 510 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 471 1.3E-119 T 15-10-2018 IPR010352 Protein of unknown function DUF945 XDD1_3794 deb93e28e825b82c265638c8124768a5 211 Pfam PF13384 Homeodomain-like domain 28 72 1.2E-9 T 15-10-2018 XDD1_3794 deb93e28e825b82c265638c8124768a5 211 SUPERFAMILY SSF46689 24 140 3.76E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0935 bb49ff7b5fc68b8da5b7fc94aae79c4f 325 Gene3D G3DSA:3.30.9.10 51 254 2.6E-15 T 15-10-2018 XDD1_0935 bb49ff7b5fc68b8da5b7fc94aae79c4f 325 Gene3D G3DSA:3.50.50.60 77 294 2.6E-15 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0935 bb49ff7b5fc68b8da5b7fc94aae79c4f 325 Pfam PF01266 FAD dependent oxidoreductase 46 291 4.9E-9 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 XDD1_0935 bb49ff7b5fc68b8da5b7fc94aae79c4f 325 SUPERFAMILY SSF51905 49 307 5.34E-16 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1645 3d5c36c0e64d8312b347db2dab97ad41 191 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 5 181 3.9E-30 T 15-10-2018 IPR024455 Phage capsid XDD1_1645 3d5c36c0e64d8312b347db2dab97ad41 191 SUPERFAMILY SSF56563 94 184 7.98E-14 T 15-10-2018 XDD1_1645 3d5c36c0e64d8312b347db2dab97ad41 191 Pfam PF05065 Phage capsid family 102 181 3.1E-11 T 15-10-2018 IPR024455 Phage capsid XDD1_2220 0a650c9edbf1136e1c3fed8311936b48 267 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 12 265 37.51 T 15-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XDD1_2220 0a650c9edbf1136e1c3fed8311936b48 267 Pfam PF00290 Tryptophan synthase alpha chain 8 266 7.2E-95 T 15-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XDD1_2220 0a650c9edbf1136e1c3fed8311936b48 267 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 15-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XDD1_2220 0a650c9edbf1136e1c3fed8311936b48 267 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 2.5E-102 T 15-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XDD1_2220 0a650c9edbf1136e1c3fed8311936b48 267 Gene3D G3DSA:3.20.20.70 1 267 4.1E-96 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_2220 0a650c9edbf1136e1c3fed8311936b48 267 SUPERFAMILY SSF51366 1 266 3.39E-90 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XDD1_3356 db206f91b3d65d4f3de678f7abbbab14 281 SUPERFAMILY SSF69572 14 271 1.15E-61 T 15-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 XDD1_3356 db206f91b3d65d4f3de678f7abbbab14 281 Gene3D G3DSA:3.40.50.720 12 281 1.1E-111 T 15-10-2018 XDD1_3356 db206f91b3d65d4f3de678f7abbbab14 281 Pfam PF00899 ThiF family 34 275 1.1E-36 T 15-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 XDD1_2011 692e0d1a7eb62d28a67f22a5163c3e87 274 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 94 2.2E-9 T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 XDD1_2011 692e0d1a7eb62d28a67f22a5163c3e87 274 Gene3D G3DSA:1.20.120.1760 7 198 1.6E-22 T 15-10-2018 XDD1_0244 a8b09ae635809f2b2f86748804c454a5 422 Gene3D G3DSA:1.20.1250.20 7 390 1.8E-24 T 15-10-2018 XDD1_0244 a8b09ae635809f2b2f86748804c454a5 422 SUPERFAMILY SSF103473 31 392 5.89E-28 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0244 a8b09ae635809f2b2f86748804c454a5 422 Pfam PF07690 Major Facilitator Superfamily 14 272 5.7E-13 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0233 a8b09ae635809f2b2f86748804c454a5 422 Gene3D G3DSA:1.20.1250.20 7 390 1.8E-24 T 15-10-2018 XDD1_0233 a8b09ae635809f2b2f86748804c454a5 422 SUPERFAMILY SSF103473 31 392 5.89E-28 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0233 a8b09ae635809f2b2f86748804c454a5 422 Pfam PF07690 Major Facilitator Superfamily 14 272 5.7E-13 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_2986 88ed493af02a4015786c81aa47603520 244 Gene3D G3DSA:3.30.70.2970 45 153 7.6E-53 T 15-10-2018 XDD1_2986 88ed493af02a4015786c81aa47603520 244 Pfam PF04402 Protein of unknown function (DUF541) 33 240 1.4E-48 T 15-10-2018 IPR007497 Protein of unknown function DUF541 XDD1_2986 88ed493af02a4015786c81aa47603520 244 Gene3D G3DSA:3.30.110.170 35 241 7.6E-53 T 15-10-2018 XDD1_1423 70eea829f91073be6758aa62c6786abf 207 Pfam PF00005 ABC transporter 29 156 1.9E-15 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_1423 70eea829f91073be6758aa62c6786abf 207 Gene3D G3DSA:3.40.50.300 1 207 8.7E-32 T 15-10-2018 XDD1_1423 70eea829f91073be6758aa62c6786abf 207 SUPERFAMILY SSF52540 8 205 1.31E-33 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2961 4fce866b82f37ab9651a4d67702b6322 396 Pfam PF03594 Benzoate membrane transport protein 17 387 7.3E-132 T 15-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 XDD1_2961 4fce866b82f37ab9651a4d67702b6322 396 TIGRFAM TIGR00843 benE: benzoate transporter 16 388 1.6E-117 T 15-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 XDD1_2840 cdfc72134d48b0f9404f3759801e94d7 394 Pfam PF04865 Baseplate J-like protein 82 305 1.7E-29 T 15-10-2018 IPR006949 Baseplate protein J-like XDD1_3428 cdfc72134d48b0f9404f3759801e94d7 394 Pfam PF04865 Baseplate J-like protein 82 305 1.7E-29 T 15-10-2018 IPR006949 Baseplate protein J-like XDD1_1407 64c11de4724217d20cd7b178741ec08f 402 SUPERFAMILY SSF103473 15 388 3.4E-26 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1407 64c11de4724217d20cd7b178741ec08f 402 Gene3D G3DSA:1.20.1250.20 11 196 5.8E-10 T 15-10-2018 XDD1_1407 64c11de4724217d20cd7b178741ec08f 402 Gene3D G3DSA:1.20.1250.20 209 392 3.3E-12 T 15-10-2018 XDD1_1407 64c11de4724217d20cd7b178741ec08f 402 Pfam PF07690 Major Facilitator Superfamily 218 396 7.9E-13 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_2149 804a4c9c43cfac8e7586729dfb2bcd93 287 Pfam PF00892 EamA-like transporter family 10 136 2.5E-15 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_2149 804a4c9c43cfac8e7586729dfb2bcd93 287 Pfam PF00892 EamA-like transporter family 147 281 2.1E-18 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_2149 804a4c9c43cfac8e7586729dfb2bcd93 287 SUPERFAMILY SSF103481 182 282 1.7E-13 T 15-10-2018 XDD1_2149 804a4c9c43cfac8e7586729dfb2bcd93 287 SUPERFAMILY SSF103481 50 139 1.7E-12 T 15-10-2018 XDD1_0837 54643d947c069522a0dc4bc49dfea49c 149 Pfam PF03477 ATP cone domain 50 136 3.7E-17 T 15-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 XDD1_0837 54643d947c069522a0dc4bc49dfea49c 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 89.104 T 15-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 XDD1_0837 54643d947c069522a0dc4bc49dfea49c 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 4.3E-75 T 15-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 XDD1_2430 7203ec4da2f511ec6420c6aff87fbb91 179 SUPERFAMILY SSF55729 6 165 3.04E-38 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_2430 7203ec4da2f511ec6420c6aff87fbb91 179 Gene3D G3DSA:3.40.630.30 9 176 6.0E-47 T 15-10-2018 XDD1_2430 7203ec4da2f511ec6420c6aff87fbb91 179 Pfam PF13302 Acetyltransferase (GNAT) domain 11 144 3.7E-22 T 15-10-2018 IPR000182 GNAT domain XDD1_0018 286a0dcc47392ef026921eb8616e75a4 101 Gene3D G3DSA:1.20.5.780 12 97 1.0E-15 T 15-10-2018 XDD1_0018 286a0dcc47392ef026921eb8616e75a4 101 Pfam PF08681 Protein of unknown function (DUF1778) 17 94 1.6E-20 T 15-10-2018 IPR014795 Vibrio phage ICP1, Orf50 XDD1_0018 286a0dcc47392ef026921eb8616e75a4 101 SUPERFAMILY SSF47598 14 91 1.67E-16 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XDD1_1058 8aece8c148c63889d73efe92da1572ca 396 SUPERFAMILY SSF51621 118 377 9.81E-29 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XDD1_1058 8aece8c148c63889d73efe92da1572ca 396 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 131 378 9.2E-21 T 15-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 XDD1_1058 8aece8c148c63889d73efe92da1572ca 396 Gene3D G3DSA:3.20.20.60 93 385 9.2E-33 T 15-10-2018 XDD1_2386 e6e9c0ada67b2b2665a9afbb3301aaa5 197 SMART SM00421 133 190 2.9E-4 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_2386 e6e9c0ada67b2b2665a9afbb3301aaa5 197 Pfam PF00196 Bacterial regulatory proteins, luxR family 136 187 2.7E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XDD1_2386 e6e9c0ada67b2b2665a9afbb3301aaa5 197 Gene3D G3DSA:1.10.10.10 94 193 3.4E-10 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2386 e6e9c0ada67b2b2665a9afbb3301aaa5 197 SUPERFAMILY SSF46894 131 191 3.03E-11 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XDD1_3609 bac9ff45b16e13c7daaeef0e3b84de3a 234 Pfam PF07356 Protein of unknown function (DUF1481) 30 230 9.7E-62 T 15-10-2018 IPR010858 Protein of unknown function DUF1481 XDD1_2703 9761166b0de9b5a2235e92c354d8a07e 258 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 10 250 28.458 T 15-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 XDD1_2703 9761166b0de9b5a2235e92c354d8a07e 258 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 17 232 2.2E-42 T 15-10-2018 XDD1_0140 1a072306ad787ddad12c56322203fbfe 300 Pfam PF00535 Glycosyl transferase family 2 6 139 1.6E-20 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XDD1_0140 1a072306ad787ddad12c56322203fbfe 300 SUPERFAMILY SSF53448 3 229 8.23E-35 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_0140 1a072306ad787ddad12c56322203fbfe 300 Gene3D G3DSA:3.90.550.10 2 204 1.1E-31 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_1896 c79f037f7ffeff25a199ad8713d17b56 165 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 16 133 5.4E-27 T 15-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN XDD1_1896 c79f037f7ffeff25a199ad8713d17b56 165 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 10 129 4.1E-26 T 15-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN XDD1_1896 c79f037f7ffeff25a199ad8713d17b56 165 Gene3D G3DSA:2.60.40.4150 23 165 3.0E-42 T 15-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily XDD1_2890 a9f88b7ea71960e3073774c57b9b0d7c 193 Gene3D G3DSA:2.40.128.110 24 192 8.4E-53 T 15-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XDD1_2890 a9f88b7ea71960e3073774c57b9b0d7c 193 Pfam PF04264 YceI-like domain 29 187 1.1E-37 T 15-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XDD1_2890 a9f88b7ea71960e3073774c57b9b0d7c 193 SMART SM00867 25 189 1.7E-64 T 15-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XDD1_2890 a9f88b7ea71960e3073774c57b9b0d7c 193 SUPERFAMILY SSF101874 23 190 6.41E-53 T 15-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XDD1_2245 e641a4e76e0a1d19b9d2c9030c05f35b 287 Gene3D G3DSA:1.10.10.10 3 84 8.6E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_2245 e641a4e76e0a1d19b9d2c9030c05f35b 287 SUPERFAMILY SSF46785 5 74 9.52E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_2245 e641a4e76e0a1d19b9d2c9030c05f35b 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 6.3E-14 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XDD1_2442 c340639d5e194618d6aa2d29dd111028 66 Gene3D G3DSA:3.40.50.300 1 65 1.7E-14 T 15-10-2018 XDD1_2442 c340639d5e194618d6aa2d29dd111028 66 Pfam PF00005 ABC transporter 18 61 4.5E-8 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_2442 c340639d5e194618d6aa2d29dd111028 66 SUPERFAMILY SSF52540 2 62 5.21E-16 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1797 c378c1cd5955ef72bc8598716318fa2d 484 Gene3D G3DSA:3.40.710.10 29 358 6.8E-78 T 15-10-2018 XDD1_1797 c378c1cd5955ef72bc8598716318fa2d 484 SUPERFAMILY SSF56601 28 353 4.68E-65 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XDD1_1797 c378c1cd5955ef72bc8598716318fa2d 484 Pfam PF00144 Beta-lactamase 37 340 3.0E-49 T 15-10-2018 IPR001466 Beta-lactamase-related XDD1_2854 190c02fc3ec73feffa8646101a8774a6 343 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 10 323 1.5E-93 T 15-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid XDD1_2854 190c02fc3ec73feffa8646101a8774a6 343 Pfam PF05125 Phage major capsid protein, P2 family 12 325 3.3E-110 T 15-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid XDD1_3130 fe70bc777b46b0d0d0494196176642d1 306 Gene3D G3DSA:3.10.450.620 26 151 7.1E-8 T 15-10-2018 XDD1_3130 fe70bc777b46b0d0d0494196176642d1 306 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 36 278 1.3E-34 T 15-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system XDD1_3799 27f8d07cf2c4ba6b133d94e6bcf0ccf8 429 Pfam PF07676 WD40-like Beta Propeller Repeat 399 423 0.15 T 15-10-2018 IPR011659 WD40-like Beta Propeller XDD1_3799 27f8d07cf2c4ba6b133d94e6bcf0ccf8 429 SUPERFAMILY SSF82171 22 424 6.67E-18 T 15-10-2018 XDD1_3799 27f8d07cf2c4ba6b133d94e6bcf0ccf8 429 Gene3D G3DSA:2.120.10.30 289 427 1.7E-13 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XDD1_3799 27f8d07cf2c4ba6b133d94e6bcf0ccf8 429 Pfam PF12566 Protein of unknown function (DUF3748) 67 187 1.7E-59 T 15-10-2018 IPR022223 Protein of unknown function DUF3748 XDD1_3080 ab6891e121af19b0c1cb6a5b9bebbc82 248 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 153 1.4E-50 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_3080 ab6891e121af19b0c1cb6a5b9bebbc82 248 Pfam PF05638 Type VI secretion system effector, Hcp 6 143 2.2E-19 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_3080 ab6891e121af19b0c1cb6a5b9bebbc82 248 SUPERFAMILY SSF141452 5 152 1.12E-29 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_3080 ab6891e121af19b0c1cb6a5b9bebbc82 248 Gene3D G3DSA:2.30.110.20 3 157 9.3E-46 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_1702 624654162288c3ac2db79fb9c9f28678 65 SUPERFAMILY SSF47413 1 61 1.87E-20 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_1702 624654162288c3ac2db79fb9c9f28678 65 PIRSF PIRSF003217 1 64 2.8E-20 T 15-10-2018 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 XDD1_1702 624654162288c3ac2db79fb9c9f28678 65 Pfam PF09048 Cro 1 59 3.5E-31 T 15-10-2018 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 XDD1_1702 624654162288c3ac2db79fb9c9f28678 65 ProDom PD054632 CRO REPRESSOR TRANSCRIPTION REGULATORY 3D-STRUCTURE DNA-BINDING DIRECT EARLY REGULATION SEQUENCING 1 61 1.0E-13 T 15-10-2018 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 XDD1_1702 624654162288c3ac2db79fb9c9f28678 65 Gene3D G3DSA:3.30.240.10 1 64 1.0E-28 T 15-10-2018 IPR038202 Regulatory protein cro superfamily XDD1_3735 eb6ebf932b32bd5463246448f5b088a2 405 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 21 368 8.3E-94 T 15-10-2018 IPR018683 Domain of unknown function DUF2169 XDD1_0024 c9f9bdf069071af747f246e8008c53b8 1227 SUPERFAMILY SSF53335 79 671 1.22E-72 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_0024 c9f9bdf069071af747f246e8008c53b8 1227 Pfam PF02384 N-6 DNA Methylase 499 634 8.2E-10 T 15-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 XDD1_0024 c9f9bdf069071af747f246e8008c53b8 1227 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 506 512 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XDD1_0024 c9f9bdf069071af747f246e8008c53b8 1227 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 503 515 8.9E-12 T 15-10-2018 XDD1_0024 c9f9bdf069071af747f246e8008c53b8 1227 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 243 259 8.9E-12 T 15-10-2018 XDD1_0024 c9f9bdf069071af747f246e8008c53b8 1227 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 536 560 8.9E-12 T 15-10-2018 XDD1_0024 c9f9bdf069071af747f246e8008c53b8 1227 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 309 323 8.9E-12 T 15-10-2018 XDD1_3104 6b1cbf782e45b959825172e3d601289f 160 Gene3D G3DSA:3.30.70.560 1 159 9.9E-58 T 15-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XDD1_3104 6b1cbf782e45b959825172e3d601289f 160 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XDD1_3104 6b1cbf782e45b959825172e3d601289f 160 SUPERFAMILY SSF55083 1 159 3.01E-54 T 15-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XDD1_3104 6b1cbf782e45b959825172e3d601289f 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 2.9E-36 T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XDD1_3104 6b1cbf782e45b959825172e3d601289f 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 1.7E-45 T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XDD1_1913 37b70e77e78668ca57af9b3846092fd5 410 Gene3D G3DSA:1.20.1250.20 217 402 7.9E-15 T 15-10-2018 XDD1_1913 37b70e77e78668ca57af9b3846092fd5 410 SUPERFAMILY SSF103473 1 399 5.36E-51 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1913 37b70e77e78668ca57af9b3846092fd5 410 Pfam PF07690 Major Facilitator Superfamily 31 339 1.6E-27 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_1913 37b70e77e78668ca57af9b3846092fd5 410 Gene3D G3DSA:1.20.1250.20 22 216 4.1E-19 T 15-10-2018 XDD1_2899 e6e06c57ee5a2de7e96b531d15826492 76 Gene3D G3DSA:1.20.58.660 1 76 1.1E-23 T 15-10-2018 XDD1_2899 e6e06c57ee5a2de7e96b531d15826492 76 Pfam PF04325 Protein of unknown function (DUF465) 19 66 1.2E-15 T 15-10-2018 IPR007420 Protein of unknown function DUF465 XDD1_2025 1bfdc60931dd3d05d17265381afaeb51 185 Gene3D G3DSA:3.15.10.40 16 185 2.3E-55 T 15-10-2018 XDD1_2025 1bfdc60931dd3d05d17265381afaeb51 185 Pfam PF07273 Protein of unknown function (DUF1439) 27 179 6.8E-48 T 15-10-2018 IPR010835 Protein of unknown function DUF1439 XDD1_3512 27b5f06d8eba3e421969238d7abaa1a0 132 Pfam PF06295 Protein of unknown function (DUF1043) 6 127 2.0E-49 T 15-10-2018 IPR009386 Protein of unknown function DUF1043 XDD1_3512 27b5f06d8eba3e421969238d7abaa1a0 132 PIRSF PIRSF006318 1 132 4.9E-49 T 15-10-2018 IPR009386 Protein of unknown function DUF1043 XDD1_0977 97f56e3836ec83db465df979b0b302cf 217 Gene3D G3DSA:2.160.20.120 21 213 1.3E-7 T 15-10-2018 XDD1_0806 13e8f1fb7fecbc97cfdac3ee34919488 414 PIRSF PIRSF006351 1 414 1.7E-72 T 15-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 XDD1_0806 13e8f1fb7fecbc97cfdac3ee34919488 414 Pfam PF02378 Phosphotransferase system, EIIC 32 331 2.5E-18 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 XDD1_2062 858549d2608d42d91e736c6f690b0045 144 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XDD1_2062 858549d2608d42d91e736c6f690b0045 144 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 7.1E-46 T 15-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 XDD1_2062 858549d2608d42d91e736c6f690b0045 144 PRINTS PR01404 DATP pyrophosphohydrolase signature 3 20 7.1E-46 T 15-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 XDD1_2062 858549d2608d42d91e736c6f690b0045 144 PRINTS PR01404 DATP pyrophosphohydrolase signature 71 90 7.1E-46 T 15-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 XDD1_2062 858549d2608d42d91e736c6f690b0045 144 PRINTS PR01404 DATP pyrophosphohydrolase signature 20 41 7.1E-46 T 15-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 XDD1_2062 858549d2608d42d91e736c6f690b0045 144 PRINTS PR01404 DATP pyrophosphohydrolase signature 99 120 7.1E-46 T 15-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 XDD1_2062 858549d2608d42d91e736c6f690b0045 144 Gene3D G3DSA:3.90.79.10 1 144 3.5E-44 T 15-10-2018 XDD1_2062 858549d2608d42d91e736c6f690b0045 144 SUPERFAMILY SSF55811 2 142 1.35E-23 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XDD1_2062 858549d2608d42d91e736c6f690b0045 144 Pfam PF00293 NUDIX domain 5 141 4.4E-19 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XDD1_0914 b81bf45ed9bae9ec871fc52e4e97d4e0 436 SUPERFAMILY SSF53613 37 418 4.83E-45 T 15-10-2018 IPR029056 Ribokinase-like XDD1_0914 b81bf45ed9bae9ec871fc52e4e97d4e0 436 Pfam PF00294 pfkB family carbohydrate kinase 148 302 2.1E-9 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB XDD1_0686 fea6c4a2b6f5c2a47528d4da4731cc6c 268 SMART SM00849 31 263 1.1E-10 T 15-10-2018 IPR001279 Metallo-beta-lactamase XDD1_0686 fea6c4a2b6f5c2a47528d4da4731cc6c 268 Gene3D G3DSA:3.60.15.10 3 267 2.8E-41 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XDD1_0686 fea6c4a2b6f5c2a47528d4da4731cc6c 268 SUPERFAMILY SSF56281 31 252 1.18E-29 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XDD1_0686 fea6c4a2b6f5c2a47528d4da4731cc6c 268 Pfam PF00753 Metallo-beta-lactamase superfamily 33 248 1.2E-17 T 15-10-2018 IPR001279 Metallo-beta-lactamase XDD1_1386 8a7bc0d056582f41925a11a1f61ac60b 154 Pfam PF12101 Protein of unknown function (DUF3577) 9 137 7.9E-58 T 15-10-2018 IPR021960 Protein of unknown function DUF3577 XDD1_1213 dd3cedefa4638e492c9401482323ef21 389 ProSitePatterns PS00216 Sugar transport proteins signature 1. 60 76 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 XDD1_1213 dd3cedefa4638e492c9401482323ef21 389 SUPERFAMILY SSF103473 7 387 2.09E-51 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1213 dd3cedefa4638e492c9401482323ef21 389 Gene3D G3DSA:1.20.1250.20 5 382 1.7E-44 T 15-10-2018 XDD1_1213 dd3cedefa4638e492c9401482323ef21 389 Pfam PF07690 Major Facilitator Superfamily 19 346 5.7E-29 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_3312 d25476ae9fcf5679837c316d17ae77d1 148 Gene3D G3DSA:3.40.50.360 1 148 1.1E-43 T 15-10-2018 IPR029039 Flavoprotein-like superfamily XDD1_3312 d25476ae9fcf5679837c316d17ae77d1 148 SUPERFAMILY SSF52218 1 148 3.46E-39 T 15-10-2018 IPR029039 Flavoprotein-like superfamily XDD1_3312 d25476ae9fcf5679837c316d17ae77d1 148 PRINTS PR00369 Flavodoxin signature 5 18 2.4E-8 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XDD1_3312 d25476ae9fcf5679837c316d17ae77d1 148 PRINTS PR00369 Flavodoxin signature 53 64 2.4E-8 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XDD1_3312 d25476ae9fcf5679837c316d17ae77d1 148 PRINTS PR00369 Flavodoxin signature 84 94 2.4E-8 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XDD1_3312 d25476ae9fcf5679837c316d17ae77d1 148 PRINTS PR00369 Flavodoxin signature 108 127 2.4E-8 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XDD1_3312 d25476ae9fcf5679837c316d17ae77d1 148 Pfam PF00258 Flavodoxin 6 129 1.1E-22 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 XDD1_2333 5e1555cbc499d7dba8f50f33d4efdf9b 259 Pfam PF02107 Flagellar L-ring protein 74 258 7.4E-59 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 XDD1_2333 5e1555cbc499d7dba8f50f33d4efdf9b 259 Hamap MF_00415 Flagellar L-ring protein [flgH]. 29 257 26.431 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 XDD1_2333 5e1555cbc499d7dba8f50f33d4efdf9b 259 PRINTS PR01008 Flagellar L-ring protein signature 173 188 1.4E-33 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 XDD1_2333 5e1555cbc499d7dba8f50f33d4efdf9b 259 PRINTS PR01008 Flagellar L-ring protein signature 199 215 1.4E-33 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 XDD1_2333 5e1555cbc499d7dba8f50f33d4efdf9b 259 PRINTS PR01008 Flagellar L-ring protein signature 236 250 1.4E-33 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 XDD1_2333 5e1555cbc499d7dba8f50f33d4efdf9b 259 PRINTS PR01008 Flagellar L-ring protein signature 220 234 1.4E-33 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 XDD1_2333 5e1555cbc499d7dba8f50f33d4efdf9b 259 PRINTS PR01008 Flagellar L-ring protein signature 100 112 1.4E-33 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 XDD1_1040 17992c6539e569b34826d5a7d844171a 565 Gene3D G3DSA:1.20.1730.10 22 550 5.8E-118 T 15-10-2018 IPR038377 Sodium/glucose symporter superfamily XDD1_1040 17992c6539e569b34826d5a7d844171a 565 Pfam PF00474 Sodium:solute symporter family 34 442 9.0E-49 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 XDD1_1040 17992c6539e569b34826d5a7d844171a 565 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 34 442 9.6E-83 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 XDD1_3564 872116135781a3b2aabd10620b7299d1 111 SUPERFAMILY SSF54909 3 91 2.28E-12 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel XDD1_1973 7d99f9fcf43d65fbcdba915fd0276ff5 258 Pfam PF06276 Ferric iron reductase FhuF-like transporter 64 189 8.6E-14 T 15-10-2018 IPR022770 Ferric iron reductase FhuF domain XDD1_1973 7d99f9fcf43d65fbcdba915fd0276ff5 258 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 230 251 1.8E-7 T 15-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 XDD1_3804 ecfbfa053fbb4b3052840c45bd5ca910 91 SMART SM01409 8 61 4.5E-16 T 15-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 XDD1_3804 ecfbfa053fbb4b3052840c45bd5ca910 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.603 T 15-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3804 ecfbfa053fbb4b3052840c45bd5ca910 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.8E-29 T 15-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XDD1_3804 ecfbfa053fbb4b3052840c45bd5ca910 91 Gene3D G3DSA:3.90.940.10 1 91 3.2E-31 T 15-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 XDD1_3804 ecfbfa053fbb4b3052840c45bd5ca910 91 Pfam PF01192 RNA polymerase Rpb6 10 59 5.8E-16 T 15-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 XDD1_3804 ecfbfa053fbb4b3052840c45bd5ca910 91 SUPERFAMILY SSF63562 1 78 2.79E-25 T 15-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 XDD1_0194 40b2119462ef5b194d34e990ccdbe9b3 311 Pfam PF01040 UbiA prenyltransferase family 33 284 6.6E-38 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 XDD1_0194 40b2119462ef5b194d34e990ccdbe9b3 311 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 24 307 1.2E-120 T 15-10-2018 XDD1_0194 40b2119462ef5b194d34e990ccdbe9b3 311 Gene3D G3DSA:1.20.120.1780 205 310 4.7E-5 T 15-10-2018 XDD1_0194 40b2119462ef5b194d34e990ccdbe9b3 311 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 15 308 21.623 T 15-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 XDD1_0194 40b2119462ef5b194d34e990ccdbe9b3 311 PIRSF PIRSF005355 7 311 1.6E-88 T 15-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 XDD1_0738 c087230fd9a27f497b78272caebac1e5 187 SUPERFAMILY SSF49401 43 187 2.78E-28 T 15-10-2018 IPR008966 Adhesion domain superfamily XDD1_0738 c087230fd9a27f497b78272caebac1e5 187 Gene3D G3DSA:2.60.40.1090 35 186 4.8E-25 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 XDD1_0738 c087230fd9a27f497b78272caebac1e5 187 Pfam PF00419 Fimbrial protein 40 186 2.1E-13 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 XDD1_1314 1ff28a3f744372be39b9cf667a733c09 364 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 194 313 6.1E-18 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_1314 1ff28a3f744372be39b9cf667a733c09 364 Gene3D G3DSA:3.40.50.300 10 348 3.0E-24 T 15-10-2018 XDD1_1314 1ff28a3f744372be39b9cf667a733c09 364 SUPERFAMILY SSF52540 11 351 4.67E-25 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1314 1ff28a3f744372be39b9cf667a733c09 364 PIRSF PIRSF029347 128 348 3.0E-30 T 15-10-2018 IPR014555 RecF-like XDD1_1314 1ff28a3f744372be39b9cf667a733c09 364 PIRSF PIRSF029347 9 115 6.4E-13 T 15-10-2018 IPR014555 RecF-like XDD1_0458 173493a56996d4bcbdf022a78c0ea34a 126 SUPERFAMILY SSF46955 3 67 1.56E-21 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily XDD1_0458 173493a56996d4bcbdf022a78c0ea34a 126 Pfam PF02316 Mu DNA-binding domain 9 70 3.1E-14 T 15-10-2018 IPR003314 Mu-type HTH domain GO:0003677 XDD1_0458 173493a56996d4bcbdf022a78c0ea34a 126 Gene3D G3DSA:1.10.10.10 2 74 1.7E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0458 173493a56996d4bcbdf022a78c0ea34a 126 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 7 117 2.0E-5 T 15-10-2018 IPR010749 Protein of unknown function DUF1323 XDD1_3798 32515459f89def4ba98741e6c6f6d85b 117 Pfam PF07119 Protein of unknown function (DUF1375) 17 79 2.0E-13 T 15-10-2018 IPR010780 Protein of unknown function DUF1375 XDD1_1794 e9633538e1f37a857e2da864e64dcd76 87 Gene3D G3DSA:1.10.1200.10 4 87 4.0E-19 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1794 e9633538e1f37a857e2da864e64dcd76 87 SUPERFAMILY SSF47336 10 86 1.24E-11 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_3746 17f25b7c7143b4524bdeb3f004f7504e 139 Pfam PF08786 DcrB 10 134 4.5E-37 T 15-10-2018 IPR014894 Protein DcrB XDD1_3746 17f25b7c7143b4524bdeb3f004f7504e 139 SUPERFAMILY SSF55724 4 138 7.32E-42 T 15-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich XDD1_3746 17f25b7c7143b4524bdeb3f004f7504e 139 Gene3D G3DSA:3.40.1000.10 3 139 3.5E-40 T 15-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich XDD1_3132 ccbe30363f35c1d3f7ccd66c8408757e 461 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 43 460 3.9E-114 T 15-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 XDD1_3132 ccbe30363f35c1d3f7ccd66c8408757e 461 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 410 426 - T 15-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 XDD1_3132 ccbe30363f35c1d3f7ccd66c8408757e 461 Pfam PF00939 Sodium:sulfate symporter transmembrane region 27 460 2.2E-57 T 15-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 XDD1_2105 66d793e9798b2ea58f573e6d3bdc182d 233 Gene3D G3DSA:2.60.40.10 148 233 1.4E-24 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_2105 66d793e9798b2ea58f573e6d3bdc182d 233 Gene3D G3DSA:2.60.40.10 23 144 2.2E-41 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_2105 66d793e9798b2ea58f573e6d3bdc182d 233 SUPERFAMILY SSF49354 20 144 1.44E-39 T 15-10-2018 IPR008962 PapD-like superfamily XDD1_2105 66d793e9798b2ea58f573e6d3bdc182d 233 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 101 118 - T 15-10-2018 IPR018046 Pili assembly chaperone, conserved site XDD1_2105 66d793e9798b2ea58f573e6d3bdc182d 233 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 144 3.4E-40 T 15-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 XDD1_2105 66d793e9798b2ea58f573e6d3bdc182d 233 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 166 226 9.6E-19 T 15-10-2018 IPR016148 Pili assembly chaperone, C-terminal XDD1_2105 66d793e9798b2ea58f573e6d3bdc182d 233 PRINTS PR00969 Pili chaperone signature 24 33 1.3E-25 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XDD1_2105 66d793e9798b2ea58f573e6d3bdc182d 233 PRINTS PR00969 Pili chaperone signature 161 176 1.3E-25 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XDD1_2105 66d793e9798b2ea58f573e6d3bdc182d 233 PRINTS PR00969 Pili chaperone signature 102 119 1.3E-25 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XDD1_2105 66d793e9798b2ea58f573e6d3bdc182d 233 PRINTS PR00969 Pili chaperone signature 126 141 1.3E-25 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XDD1_2105 66d793e9798b2ea58f573e6d3bdc182d 233 SUPERFAMILY SSF49584 151 228 1.09E-20 T 15-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily XDD1_0187 45ae4b46599dbcd7b3368a2da7107883 149 Pfam PF05656 Protein of unknown function (DUF805) 8 131 6.5E-17 T 15-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 XDD1_3560 511ed3f39123af382dac9e63bfc23688 481 Pfam PF00474 Sodium:solute symporter family 36 432 8.4E-127 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 XDD1_3560 511ed3f39123af382dac9e63bfc23688 481 Gene3D G3DSA:1.20.1730.10 25 481 1.7E-79 T 15-10-2018 IPR038377 Sodium/glucose symporter superfamily XDD1_3560 511ed3f39123af382dac9e63bfc23688 481 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 2.5E-103 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 XDD1_3560 511ed3f39123af382dac9e63bfc23688 481 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 472 3.2E-226 T 15-10-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0036376 XDD1_3560 511ed3f39123af382dac9e63bfc23688 481 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 15-10-2018 IPR018212 Sodium/solute symporter, conserved site XDD1_3560 511ed3f39123af382dac9e63bfc23688 481 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 15-10-2018 IPR018212 Sodium/solute symporter, conserved site XDD1_3949 69131093778b02fe93984f1dee8e84b0 136 Pfam PF06836 Protein of unknown function (DUF1240) 42 136 1.3E-31 T 15-10-2018 IPR010665 Protein of unknown function DUF1240 XDD1_0532 1469db469c9f958ef9bed4e9599a75a3 330 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 13 324 5.4E-110 T 15-10-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 XDD1_0532 1469db469c9f958ef9bed4e9599a75a3 330 Gene3D G3DSA:3.40.50.1100 51 157 5.2E-112 T 15-10-2018 XDD1_0532 1469db469c9f958ef9bed4e9599a75a3 330 PIRSF PIRSF006278 1 329 5.8E-92 T 15-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase XDD1_0532 1469db469c9f958ef9bed4e9599a75a3 330 Gene3D G3DSA:3.40.50.1100 18 321 5.2E-112 T 15-10-2018 XDD1_0532 1469db469c9f958ef9bed4e9599a75a3 330 SUPERFAMILY SSF53686 10 324 6.02E-75 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XDD1_0532 1469db469c9f958ef9bed4e9599a75a3 330 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 315 2.1E-51 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XDD1_1663 dcc2a6a89d541baf8594b8a160a471b1 127 Gene3D G3DSA:3.10.450.50 15 125 9.5E-11 T 15-10-2018 XDD1_1663 dcc2a6a89d541baf8594b8a160a471b1 127 Pfam PF14534 Domain of unknown function (DUF4440) 23 117 1.8E-8 T 15-10-2018 IPR027843 Domain of unknown function DUF4440 XDD1_1663 dcc2a6a89d541baf8594b8a160a471b1 127 SUPERFAMILY SSF54427 22 126 2.24E-14 T 15-10-2018 IPR032710 NTF2-like domain superfamily XDD1_3793 e5d2c91eb8f0896836ef483c7d8680eb 134 SUPERFAMILY SSF53098 10 105 5.06E-5 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3793 e5d2c91eb8f0896836ef483c7d8680eb 134 Pfam PF13358 DDE superfamily endonuclease 11 97 5.1E-18 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_3793 e5d2c91eb8f0896836ef483c7d8680eb 134 Gene3D G3DSA:3.30.420.470 5 127 2.2E-11 T 15-10-2018 XDD1_0920 d62f62edafe0de29f7547eec18096e73 275 Pfam PF01963 TraB family 40 273 2.2E-35 T 15-10-2018 IPR002816 Pheromone shutdown, TraB XDD1_2721 0e17c990c8fa7be8079d1647e7a93594 83 Gene3D G3DSA:1.10.1200.10 3 80 2.7E-16 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2721 0e17c990c8fa7be8079d1647e7a93594 83 Pfam PF00550 Phosphopantetheine attachment site 13 75 2.8E-8 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain XDD1_2721 0e17c990c8fa7be8079d1647e7a93594 83 SUPERFAMILY SSF47336 7 78 2.62E-12 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1279 0df6000c2fc4907f7b91009c0a6a8b36 224 Gene3D G3DSA:1.10.3720.10 2 224 4.7E-50 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_1279 0df6000c2fc4907f7b91009c0a6a8b36 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 9.9E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_1279 0df6000c2fc4907f7b91009c0a6a8b36 224 SUPERFAMILY SSF161098 14 209 2.62E-39 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_1279 0df6000c2fc4907f7b91009c0a6a8b36 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 3.4E-23 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 XDD1_1905 77601ea71363e30884c70569fd708a0c 297 SUPERFAMILY SSF52402 15 233 2.23E-52 T 15-10-2018 XDD1_1905 77601ea71363e30884c70569fd708a0c 297 Gene3D G3DSA:3.40.50.620 2 263 5.2E-47 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_1905 77601ea71363e30884c70569fd708a0c 297 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 8 269 54.947 T 15-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 XDD1_1905 77601ea71363e30884c70569fd708a0c 297 PIRSF PIRSF004976 2 282 1.9E-69 T 15-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 XDD1_1905 77601ea71363e30884c70569fd708a0c 297 Pfam PF01171 PP-loop family 41 203 1.5E-14 T 15-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 XDD1_1853 cbb474dcf9a05c7e169a89bad79dfb73 383 Pfam PF02353 Mycolic acid cyclopropane synthetase 109 368 2.9E-98 T 15-10-2018 XDD1_1853 cbb474dcf9a05c7e169a89bad79dfb73 383 Gene3D G3DSA:3.40.50.150 117 376 1.8E-97 T 15-10-2018 XDD1_1853 cbb474dcf9a05c7e169a89bad79dfb73 383 PIRSF PIRSF003085 2 379 1.9E-121 T 15-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 XDD1_1853 cbb474dcf9a05c7e169a89bad79dfb73 383 SUPERFAMILY SSF53335 31 327 6.94E-76 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_1146 11a808f4fc63fd00903e6849b689fec0 183 Pfam PF00694 Aconitase C-terminal domain 68 118 2.0E-17 T 15-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 XDD1_1146 11a808f4fc63fd00903e6849b689fec0 183 Gene3D G3DSA:3.20.19.10 5 182 5.6E-45 T 15-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 XDD1_1146 11a808f4fc63fd00903e6849b689fec0 183 SUPERFAMILY SSF52016 7 180 8.44E-40 T 15-10-2018 XDD1_1146 11a808f4fc63fd00903e6849b689fec0 183 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 11 177 1.0E-34 T 15-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 XDD1_3685 5159994d60d97b8a2463f1d747f667a6 336 Gene3D G3DSA:3.40.50.1360 89 335 6.2E-82 T 15-10-2018 XDD1_3685 5159994d60d97b8a2463f1d747f667a6 336 SUPERFAMILY SSF100950 87 335 2.56E-58 T 15-10-2018 IPR037171 NagB/RpiA transferase-like XDD1_3685 5159994d60d97b8a2463f1d747f667a6 336 Gene3D G3DSA:1.10.10.10 26 83 2.6E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_3685 5159994d60d97b8a2463f1d747f667a6 336 Pfam PF04198 Putative sugar-binding domain 87 335 1.6E-66 T 15-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 XDD1_1333 9a440672c36dc412ec0617ff6479b05d 259 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 19 245 2.5E-55 T 15-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 XDD1_1333 9a440672c36dc412ec0617ff6479b05d 259 Gene3D G3DSA:3.40.1390.30 26 243 1.1E-84 T 15-10-2018 XDD1_1333 9a440672c36dc412ec0617ff6479b05d 259 Gene3D G3DSA:3.40.1390.30 109 230 1.1E-84 T 15-10-2018 XDD1_1333 9a440672c36dc412ec0617ff6479b05d 259 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 13 258 1.5E-69 T 15-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 XDD1_1333 9a440672c36dc412ec0617ff6479b05d 259 SUPERFAMILY SSF102705 13 258 2.62E-81 T 15-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily XDD1_1620 262c71fbaf1b26ac901ce2e582690b2c 447 Gene3D G3DSA:3.30.470.20 126 445 7.3E-29 T 15-10-2018 XDD1_1620 262c71fbaf1b26ac901ce2e582690b2c 447 SUPERFAMILY SSF56059 126 334 5.52E-14 T 15-10-2018 XDD1_0595 73adf9fa3fa1f7d34022e67ab652b249 345 Pfam PF09344 CT1975-like protein 5 324 1.1E-100 T 15-10-2018 IPR010148 CRISPR-associated protein, CT1975 XDD1_0595 73adf9fa3fa1f7d34022e67ab652b249 345 TIGRFAM TIGR01869 casC_Cse4: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI 3 317 9.9E-102 T 15-10-2018 IPR010148 CRISPR-associated protein, CT1975 XDD1_3753 7c77008036587a1f724fc96985520c9d 480 Pfam PF06812 ImpA, N-terminal, type VI secretion system 14 113 3.0E-14 T 15-10-2018 IPR010657 ImpA, N-terminal XDD1_3753 7c77008036587a1f724fc96985520c9d 480 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 217 459 3.9E-79 T 15-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 XDD1_3753 7c77008036587a1f724fc96985520c9d 480 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 9 460 1.6E-145 T 15-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 XDD1_0570 1191143d50c7edbd927eb206789428c0 94 Pfam PF08681 Protein of unknown function (DUF1778) 8 88 1.3E-21 T 15-10-2018 IPR014795 Vibrio phage ICP1, Orf50 XDD1_0570 1191143d50c7edbd927eb206789428c0 94 SUPERFAMILY SSF47598 5 83 1.62E-17 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XDD1_0570 1191143d50c7edbd927eb206789428c0 94 Gene3D G3DSA:1.20.5.780 1 90 1.3E-24 T 15-10-2018 XDD1_2335 b998528cb5f67391679459b16593ed4a 251 SUPERFAMILY SSF117143 77 209 2.22E-13 T 15-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like XDD1_2335 b998528cb5f67391679459b16593ed4a 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 170 247 6.1E-22 T 15-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain XDD1_2335 b998528cb5f67391679459b16593ed4a 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 3.6E-31 T 15-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G XDD1_2335 b998528cb5f67391679459b16593ed4a 251 Pfam PF00460 Flagella basal body rod protein 5 35 7.2E-10 T 15-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 XDD1_1559 5b452d12f360fc9d5dd225bbb9341ec1 213 Gene3D G3DSA:2.50.20.10 29 212 6.1E-51 T 15-10-2018 XDD1_1559 5b452d12f360fc9d5dd225bbb9341ec1 213 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 20 211 30.212 T 15-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 XDD1_1559 5b452d12f360fc9d5dd225bbb9341ec1 213 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 11 213 3.5E-90 T 15-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 XDD1_1559 5b452d12f360fc9d5dd225bbb9341ec1 213 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 43 200 5.3E-56 T 15-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like XDD1_1559 5b452d12f360fc9d5dd225bbb9341ec1 213 SUPERFAMILY SSF89392 32 212 5.49E-54 T 15-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX XDD1_3036 841d0ec78fdb526a19a765b3df9cea5a 226 SMART SM00927 57 155 8.6E-64 T 15-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 XDD1_3036 841d0ec78fdb526a19a765b3df9cea5a 226 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 8 224 2.0E-109 T 15-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 XDD1_3036 841d0ec78fdb526a19a765b3df9cea5a 226 Gene3D G3DSA:3.40.600.10 5 226 1.1E-51 T 15-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 XDD1_3036 841d0ec78fdb526a19a765b3df9cea5a 226 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 226 151.495 T 15-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 XDD1_3036 841d0ec78fdb526a19a765b3df9cea5a 226 Pfam PF02976 DNA mismatch repair enzyme MutH 57 155 1.3E-31 T 15-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 XDD1_3036 841d0ec78fdb526a19a765b3df9cea5a 226 SUPERFAMILY SSF52980 7 225 1.07E-81 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 XDD1_1222 b60448acb47a48ffa4daa1789c82b60b 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 2.3E-76 T 15-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase XDD1_1222 b60448acb47a48ffa4daa1789c82b60b 243 Gene3D G3DSA:3.60.140.10 1 242 2.1E-94 T 15-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily XDD1_1222 b60448acb47a48ffa4daa1789c82b60b 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 242 7.4E-69 T 15-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase XDD1_1222 b60448acb47a48ffa4daa1789c82b60b 243 SUPERFAMILY SSF64438 3 242 2.01E-86 T 15-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic XDD1_3714 7de4c0b315f7de5185591d15bbac0d8d 63 Pfam PF12486 Type VI secretion system, EvfB, or VasL 1 43 4.3E-11 T 15-10-2018 IPR021069 ImpA, C-terminal XDD1_1644 b0344392095c2e190e8203891cb5d734 131 Pfam PF06836 Protein of unknown function (DUF1240) 37 131 6.3E-38 T 15-10-2018 IPR010665 Protein of unknown function DUF1240 XDD1_1892 0645fd54729644bc457b7968898793f4 356 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 1 344 3.5E-58 T 15-10-2018 IPR017740 Type VI secretion system-associated, ImpA XDD1_1892 0645fd54729644bc457b7968898793f4 356 Pfam PF06812 ImpA, N-terminal, type VI secretion system 7 130 3.3E-34 T 15-10-2018 IPR010657 ImpA, N-terminal XDD1_3518 ba19c563b1f19090c1dc18f7449c3e7c 209 PIRSF PIRSF004649 1 209 6.7E-60 T 15-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC XDD1_3518 ba19c563b1f19090c1dc18f7449c3e7c 209 Gene3D G3DSA:3.10.450.710 21 198 4.7E-43 T 15-10-2018 XDD1_3518 ba19c563b1f19090c1dc18f7449c3e7c 209 Pfam PF05494 MlaC protein 31 195 4.8E-54 T 15-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC XDD1_3484 da0fa5f4c05598c7d5855aadef935af9 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 8 101 1.0E-31 T 15-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 XDD1_3484 da0fa5f4c05598c7d5855aadef935af9 101 Gene3D G3DSA:1.20.120.20 4 79 1.5E-5 T 15-10-2018 XDD1_3323 d5e8880419fdd152a8d7c8896e86294e 251 SUPERFAMILY SSF47807 159 242 1.0E-23 T 15-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily XDD1_3323 d5e8880419fdd152a8d7c8896e86294e 251 SMART SM00279 161 196 1.6E-11 T 15-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 XDD1_3323 d5e8880419fdd152a8d7c8896e86294e 251 Hamap MF_01192 Flap endonuclease Xni [xni]. 1 250 43.827 T 15-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 XDD1_3323 d5e8880419fdd152a8d7c8896e86294e 251 SUPERFAMILY SSF88723 3 158 1.28E-41 T 15-10-2018 IPR029060 PIN-like domain superfamily XDD1_3323 d5e8880419fdd152a8d7c8896e86294e 251 SMART SM00475 2 249 7.5E-97 T 15-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 XDD1_3323 d5e8880419fdd152a8d7c8896e86294e 251 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 159 248 1.0E-25 T 15-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 XDD1_3323 d5e8880419fdd152a8d7c8896e86294e 251 Gene3D G3DSA:1.10.150.20 161 250 5.6E-28 T 15-10-2018 XDD1_3323 d5e8880419fdd152a8d7c8896e86294e 251 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 145 1.1E-32 T 15-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 XDD1_3323 d5e8880419fdd152a8d7c8896e86294e 251 Gene3D G3DSA:3.40.50.1010 1 160 2.1E-60 T 15-10-2018 XDD1_3257 71a9ffac4d0644c80416bfb50d9fd3f2 205 Pfam PF00717 Peptidase S24-like 117 183 1.4E-15 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C XDD1_3257 71a9ffac4d0644c80416bfb50d9fd3f2 205 TIGRFAM TIGR00498 lexA: repressor LexA 1 202 5.1E-84 T 15-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 XDD1_3257 71a9ffac4d0644c80416bfb50d9fd3f2 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 114 124 3.0E-13 T 15-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 XDD1_3257 71a9ffac4d0644c80416bfb50d9fd3f2 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 153 165 3.0E-13 T 15-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 XDD1_3257 71a9ffac4d0644c80416bfb50d9fd3f2 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 136 3.0E-13 T 15-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 XDD1_3257 71a9ffac4d0644c80416bfb50d9fd3f2 205 Hamap MF_00015 LexA repressor [lexA]. 3 202 31.953 T 15-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 XDD1_3257 71a9ffac4d0644c80416bfb50d9fd3f2 205 SUPERFAMILY SSF51306 79 201 1.69E-37 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XDD1_3257 71a9ffac4d0644c80416bfb50d9fd3f2 205 SUPERFAMILY SSF46785 3 69 9.61E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3257 71a9ffac4d0644c80416bfb50d9fd3f2 205 Pfam PF01726 LexA DNA binding domain 1 65 1.3E-28 T 15-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 XDD1_3257 71a9ffac4d0644c80416bfb50d9fd3f2 205 Gene3D G3DSA:2.10.109.10 83 205 5.1E-46 T 15-10-2018 XDD1_3257 71a9ffac4d0644c80416bfb50d9fd3f2 205 Gene3D G3DSA:1.10.10.10 1 69 1.0E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XDD1_0041 c3df12f0d0ff2e7356f43d0cffdc4437 125 Pfam PF03899 ATP synthase I chain 13 109 1.5E-13 T 15-10-2018 IPR005598 ATP synthase protein I XDD1_3402 e23cc3b2a59d9f3d37f17777a1fce797 225 Pfam PF06693 Protein of unknown function (DUF1190) 43 209 9.8E-58 T 15-10-2018 IPR009576 Biofilm formation YgiB XDD1_3402 e23cc3b2a59d9f3d37f17777a1fce797 225 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 3 225 36.035 T 15-10-2018 IPR009576 Biofilm formation YgiB XDD1_1942 4fe7dd8b6e3905001e78d99d12a75d14 145 PIRSF PIRSF006276 1 145 1.1E-18 T 15-10-2018 IPR006015 Universal stress protein A XDD1_1942 4fe7dd8b6e3905001e78d99d12a75d14 145 Pfam PF00582 Universal stress protein family 1 145 1.0E-22 T 15-10-2018 IPR006016 UspA XDD1_1942 4fe7dd8b6e3905001e78d99d12a75d14 145 SUPERFAMILY SSF52402 2 145 3.27E-28 T 15-10-2018 XDD1_1942 4fe7dd8b6e3905001e78d99d12a75d14 145 PRINTS PR01438 Universal stress protein signature 106 118 2.4E-11 T 15-10-2018 IPR006015 Universal stress protein A XDD1_1942 4fe7dd8b6e3905001e78d99d12a75d14 145 PRINTS PR01438 Universal stress protein signature 2 20 2.4E-11 T 15-10-2018 IPR006015 Universal stress protein A XDD1_1942 4fe7dd8b6e3905001e78d99d12a75d14 145 PRINTS PR01438 Universal stress protein signature 123 145 2.4E-11 T 15-10-2018 IPR006015 Universal stress protein A XDD1_1942 4fe7dd8b6e3905001e78d99d12a75d14 145 Gene3D G3DSA:3.40.50.620 1 145 1.2E-32 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XDD1_2915 fbf175a5db35178f4a97fbe7aaf85e7b 116 Gene3D G3DSA:3.10.450.40 4 115 2.1E-20 T 15-10-2018 XDD1_2915 fbf175a5db35178f4a97fbe7aaf85e7b 116 SUPERFAMILY SSF160719 11 113 3.92E-29 T 15-10-2018 XDD1_2915 fbf175a5db35178f4a97fbe7aaf85e7b 116 Pfam PF04965 Gene 25-like lysozyme 18 101 4.9E-14 T 15-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD XDD1_0152 4280291d5cb63b1124c95d34fb89432a 419 Pfam PF07804 HipA-like C-terminal domain 163 385 3.6E-42 T 15-10-2018 IPR012893 HipA-like, C-terminal XDD1_0152 4280291d5cb63b1124c95d34fb89432a 419 Pfam PF13657 HipA N-terminal domain 10 120 8.5E-18 T 15-10-2018 IPR017508 HipA, N-terminal subdomain 1 XDD1_0098 e4d0a7d30dc583b5540861447c5656f0 680 Pfam PF01432 Peptidase family M3 222 677 4.9E-165 T 15-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 XDD1_0098 e4d0a7d30dc583b5540861447c5656f0 680 Gene3D G3DSA:1.10.1370.10 140 610 6.8E-267 T 15-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 XDD1_0098 e4d0a7d30dc583b5540861447c5656f0 680 SUPERFAMILY SSF55486 1 677 4.03E-204 T 15-10-2018 XDD1_0098 e4d0a7d30dc583b5540861447c5656f0 680 Gene3D G3DSA:1.10.1370.40 13 675 6.8E-267 T 15-10-2018 XDD1_3466 58bece67aa53d55d0760d299667629e9 119 Gene3D G3DSA:3.10.129.10 1 119 1.8E-35 T 15-10-2018 XDD1_3466 58bece67aa53d55d0760d299667629e9 119 SUPERFAMILY SSF54637 14 115 4.07E-14 T 15-10-2018 IPR029069 HotDog domain superfamily XDD1_3466 58bece67aa53d55d0760d299667629e9 119 Pfam PF07977 FabA-like domain 23 93 5.5E-5 T 15-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XDD1_3466 58bece67aa53d55d0760d299667629e9 119 PIRSF PIRSF030962 1 119 1.0E-38 T 15-10-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XDD1_1929 26be72617ea74165ad32fd58ffb0adea 205 SUPERFAMILY SSF51569 3 203 7.51E-56 T 15-10-2018 XDD1_1929 26be72617ea74165ad32fd58ffb0adea 205 Pfam PF01081 KDPG and KHG aldolase 6 182 2.8E-26 T 15-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 XDD1_1929 26be72617ea74165ad32fd58ffb0adea 205 Gene3D G3DSA:3.20.20.70 1 205 1.4E-65 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_0169 6fcdcb07e110dc641345c65967c3674d 376 SUPERFAMILY SSF53756 233 372 1.32E-8 T 15-10-2018 XDD1_0169 6fcdcb07e110dc641345c65967c3674d 376 Pfam PF13692 Glycosyl transferases group 1 237 372 2.2E-10 T 15-10-2018 XDD1_0169 6fcdcb07e110dc641345c65967c3674d 376 Gene3D G3DSA:3.40.50.2000 223 375 2.2E-10 T 15-10-2018 XDD1_3957 f9867cb8dd1f8fadb8418cf570bf5887 690 SUPERFAMILY SSF159941 520 666 1.7E-38 T 15-10-2018 IPR024047 MM3350-like superfamily XDD1_3957 f9867cb8dd1f8fadb8418cf570bf5887 690 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 520 667 1.5E-37 T 15-10-2018 IPR012912 Plasmid pRiA4b, Orf3 XDD1_3957 f9867cb8dd1f8fadb8418cf570bf5887 690 Gene3D G3DSA:3.10.290.30 516 681 3.1E-39 T 15-10-2018 IPR024047 MM3350-like superfamily XDD1_1494 5533ebcc1681f3e09c8c9de9976d85ff 132 SUPERFAMILY SSF47413 12 80 7.78E-18 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_1494 5533ebcc1681f3e09c8c9de9976d85ff 132 Gene3D G3DSA:1.10.260.40 11 101 5.0E-19 T 15-10-2018 XDD1_1494 5533ebcc1681f3e09c8c9de9976d85ff 132 Pfam PF01381 Helix-turn-helix 23 74 3.3E-11 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_1494 5533ebcc1681f3e09c8c9de9976d85ff 132 SMART SM00530 19 74 7.6E-13 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_0829 30ce0c2180298320f1be0202f0ae5a6a 200 Gene3D G3DSA:3.40.30.10 1 197 2.7E-72 T 15-10-2018 XDD1_0829 30ce0c2180298320f1be0202f0ae5a6a 200 SUPERFAMILY SSF52833 1 195 3.16E-67 T 15-10-2018 IPR036249 Thioredoxin-like superfamily XDD1_0829 30ce0c2180298320f1be0202f0ae5a6a 200 PIRSF PIRSF000239 1 199 1.2E-58 T 15-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XDD1_0829 30ce0c2180298320f1be0202f0ae5a6a 200 Pfam PF00578 AhpC/TSA family 5 139 1.0E-35 T 15-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XDD1_0829 30ce0c2180298320f1be0202f0ae5a6a 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 195 7.9E-11 T 15-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XDD1_0695 4844ba9b3eb1363c33d3bfb7ad8a211a 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 1.9E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_0695 4844ba9b3eb1363c33d3bfb7ad8a211a 286 SUPERFAMILY SSF161098 6 275 4.19E-54 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_0695 4844ba9b3eb1363c33d3bfb7ad8a211a 286 Gene3D G3DSA:1.10.3720.10 6 281 1.0E-52 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_1841 ba390da677707a627a2af0478bc9ccd3 73 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 19 41 0.0017 T 15-10-2018 IPR006530 YD repeat XDD1_0848 39f7fe20a47c7e29386cc8239f1db0ec 479 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 9 467 1.4E-157 T 15-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 XDD1_0848 39f7fe20a47c7e29386cc8239f1db0ec 479 Pfam PF03553 Na+/H+ antiporter family 159 463 3.6E-54 T 15-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 XDD1_0609 5086a2ba8a1b4b83f68869da18c130b4 103 PIRSF PIRSF039032 1 103 4.1E-38 T 15-10-2018 IPR009387 Toxin HigB-2 XDD1_0855 fb7f4382546c817fe674ef944ea86318 408 Pfam PF07690 Major Facilitator Superfamily 22 342 1.1E-17 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0855 fb7f4382546c817fe674ef944ea86318 408 Gene3D G3DSA:1.20.1250.20 16 401 1.8E-22 T 15-10-2018 XDD1_0855 fb7f4382546c817fe674ef944ea86318 408 SUPERFAMILY SSF103473 15 403 2.88E-27 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1429 ed595afb04e1b38fcfa8ace67d487767 73 SUPERFAMILY SSF82057 2 72 1.97E-25 T 15-10-2018 XDD1_1429 ed595afb04e1b38fcfa8ace67d487767 73 Pfam PF03831 PhnA domain 5 72 1.1E-29 T 15-10-2018 IPR013988 PhnA protein, C-terminal XDD1_1429 ed595afb04e1b38fcfa8ace67d487767 73 Gene3D G3DSA:2.30.30.40 1 73 2.3E-32 T 15-10-2018 XDD1_2710 d9ce2e50b16b035be0f77e433cac3a6e 379 Gene3D G3DSA:2.60.120.650 18 334 3.2E-36 T 15-10-2018 XDD1_2710 d9ce2e50b16b035be0f77e433cac3a6e 379 Pfam PF13621 Cupin-like domain 62 332 6.3E-22 T 15-10-2018 XDD1_2710 d9ce2e50b16b035be0f77e433cac3a6e 379 SUPERFAMILY SSF51197 50 341 6.87E-28 T 15-10-2018 XDD1_2373 2795974e2b7e31da5b0144afb6ad3aa4 165 SUPERFAMILY SSF50341 14 156 4.19E-39 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 XDD1_2373 2795974e2b7e31da5b0144afb6ad3aa4 165 Pfam PF01584 CheW-like domain 18 154 1.9E-35 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 XDD1_2373 2795974e2b7e31da5b0144afb6ad3aa4 165 Gene3D G3DSA:2.30.30.40 20 145 7.9E-40 T 15-10-2018 XDD1_2373 2795974e2b7e31da5b0144afb6ad3aa4 165 Gene3D G3DSA:2.40.50.180 37 146 7.9E-40 T 15-10-2018 XDD1_2373 2795974e2b7e31da5b0144afb6ad3aa4 165 SMART SM00260 14 151 5.0E-43 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 XDD1_2518 f4b24ddea343bee0139c07de798db77c 262 SMART SM00382 30 215 6.3E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain XDD1_2518 f4b24ddea343bee0139c07de798db77c 262 Gene3D G3DSA:3.40.50.300 4 254 8.6E-59 T 15-10-2018 XDD1_2518 f4b24ddea343bee0139c07de798db77c 262 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XDD1_2518 f4b24ddea343bee0139c07de798db77c 262 Pfam PF00005 ABC transporter 27 165 1.6E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XDD1_2518 f4b24ddea343bee0139c07de798db77c 262 SUPERFAMILY SSF52540 5 228 1.89E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0821 6e4fb26d4e82b018385ca482f149564a 1226 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1116 1181 6.1E-14 T 15-10-2018 XDD1_0821 6e4fb26d4e82b018385ca482f149564a 1226 SUPERFAMILY SSF52540 26 1199 1.46E-29 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0821 6e4fb26d4e82b018385ca482f149564a 1226 Gene3D G3DSA:3.40.50.300 1 293 1.5E-46 T 15-10-2018 XDD1_0821 6e4fb26d4e82b018385ca482f149564a 1226 Gene3D G3DSA:3.40.50.300 946 1221 6.0E-26 T 15-10-2018 XDD1_0027 8a12c467098fa9d0475b9191474f6107 200 Pfam PF08849 Putative inner membrane protein (DUF1819) 7 186 9.8E-41 T 15-10-2018 IPR014948 Protein of unknown function DUF1819, putative inner membrane XDD1_0027 8a12c467098fa9d0475b9191474f6107 200 Gene3D G3DSA:1.10.3540.10 3 199 2.4E-51 T 15-10-2018 XDD1_2992 111c095511bd46a634625da2cfd8cf0c 224 Gene3D G3DSA:3.40.630.30 77 189 3.1E-8 T 15-10-2018 XDD1_2992 111c095511bd46a634625da2cfd8cf0c 224 SUPERFAMILY SSF55729 81 184 9.43E-9 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_2992 111c095511bd46a634625da2cfd8cf0c 224 Pfam PF13673 Acetyltransferase (GNAT) domain 95 182 2.5E-5 T 15-10-2018 IPR000182 GNAT domain XDD1_3905 b64b91729d37d17465aafbe894822f42 120 SUPERFAMILY SSF63520 14 113 2.88E-7 T 15-10-2018 IPR036634 PRD domain superfamily GO:0006355 XDD1_0573 7d0d903be115373bf5f81466fb7e8406 498 Pfam PF11855 Protein of unknown function (DUF3375) 16 485 1.3E-96 T 15-10-2018 IPR021804 Protein of unknown function DUF3375 XDD1_1799 d5e4cd42aee1c1055fb381fe8b5dea89 243 SUPERFAMILY SSF53474 10 231 1.72E-36 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1799 d5e4cd42aee1c1055fb381fe8b5dea89 243 Pfam PF00975 Thioesterase domain 16 237 3.6E-42 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 XDD1_1799 d5e4cd42aee1c1055fb381fe8b5dea89 243 Gene3D G3DSA:3.40.50.1820 2 238 2.0E-48 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_0296 85b8bbfdb604fe2819acc27629a0fdb3 117 SUPERFAMILY SSF53137 3 115 1.33E-54 T 15-10-2018 XDD1_0296 85b8bbfdb604fe2819acc27629a0fdb3 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 3.4E-43 T 15-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XDD1_0296 85b8bbfdb604fe2819acc27629a0fdb3 117 Gene3D G3DSA:3.30.420.100 1 117 5.6E-46 T 15-10-2018 XDD1_0296 85b8bbfdb604fe2819acc27629a0fdb3 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.195 T 15-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_0296 85b8bbfdb604fe2819acc27629a0fdb3 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 4.9E-46 T 15-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 XDD1_3897 f0ba449d34c9438c30b5f1a66436f95a 185 SUPERFAMILY SSF53474 5 169 4.57E-31 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_3897 f0ba449d34c9438c30b5f1a66436f95a 185 Pfam PF06821 Serine hydrolase 6 174 2.2E-55 T 15-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 XDD1_3897 f0ba449d34c9438c30b5f1a66436f95a 185 Gene3D G3DSA:3.40.50.1820 1 181 2.1E-52 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1131 a05e0bc0b45d62e00585d774a5a21cfb 338 Pfam PF07514 Putative helicase 28 240 1.2E-33 T 15-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative XDD1_1131 a05e0bc0b45d62e00585d774a5a21cfb 338 Gene3D G3DSA:1.10.3210.40 32 247 2.7E-13 T 15-10-2018 XDD1_1131 a05e0bc0b45d62e00585d774a5a21cfb 338 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 28 236 2.5E-66 T 15-10-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class XDD1_3190 8a8f18d9ad87125aa827b6d920354bc3 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 6.5E-13 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 XDD1_3190 8a8f18d9ad87125aa827b6d920354bc3 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 6.5E-13 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 XDD1_3190 8a8f18d9ad87125aa827b6d920354bc3 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 6.5E-13 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 XDD1_3190 8a8f18d9ad87125aa827b6d920354bc3 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 6.5E-13 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 XDD1_3190 8a8f18d9ad87125aa827b6d920354bc3 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 6.5E-13 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 XDD1_3190 8a8f18d9ad87125aa827b6d920354bc3 233 Gene3D G3DSA:3.40.50.80 99 233 2.1E-27 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XDD1_3190 8a8f18d9ad87125aa827b6d920354bc3 233 SUPERFAMILY SSF52343 100 231 1.7E-34 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XDD1_3190 8a8f18d9ad87125aa827b6d920354bc3 233 SUPERFAMILY SSF63380 3 97 8.06E-21 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XDD1_3190 8a8f18d9ad87125aa827b6d920354bc3 233 Gene3D G3DSA:2.40.30.10 2 98 7.0E-24 T 15-10-2018 XDD1_3190 8a8f18d9ad87125aa827b6d920354bc3 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 95 1.2E-4 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 XDD1_3190 8a8f18d9ad87125aa827b6d920354bc3 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 2.2E-22 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 XDD1_0584 cf93fb68ea053e70ab867abe6730edf2 303 Gene3D G3DSA:3.90.850.10 84 303 9.6E-79 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 XDD1_0584 cf93fb68ea053e70ab867abe6730edf2 303 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 90 300 2.0E-69 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 XDD1_0584 cf93fb68ea053e70ab867abe6730edf2 303 SUPERFAMILY SSF56529 78 301 2.35E-70 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 XDD1_3544 844b992b90f8d70ddbc993007500a082 372 Gene3D G3DSA:2.40.420.20 278 352 3.4E-69 T 15-10-2018 XDD1_3544 844b992b90f8d70ddbc993007500a082 372 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 352 2.9E-75 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 XDD1_3544 844b992b90f8d70ddbc993007500a082 372 SUPERFAMILY SSF111369 60 271 2.35E-38 T 15-10-2018 XDD1_3544 844b992b90f8d70ddbc993007500a082 372 Gene3D G3DSA:2.40.30.170 60 277 3.4E-69 T 15-10-2018 XDD1_3544 844b992b90f8d70ddbc993007500a082 372 Gene3D G3DSA:2.40.50.100 67 195 3.4E-69 T 15-10-2018 XDD1_3544 844b992b90f8d70ddbc993007500a082 372 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 267 3.9E-30 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XDD1_3544 844b992b90f8d70ddbc993007500a082 372 Gene3D G3DSA:1.10.287.470 102 161 3.4E-69 T 15-10-2018 XDD1_3758 b81b946886de6df0b00fe901bdb3de4d 450 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 446 6.4E-161 T 15-10-2018 IPR010263 Type VI secretion protein, VC_A0114 XDD1_3758 b81b946886de6df0b00fe901bdb3de4d 450 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 445 6.1E-154 T 15-10-2018 IPR010263 Type VI secretion protein, VC_A0114 XDD1_1383 1aad9c6e090d77ae8035ae4786c2abf7 185 Pfam PF08900 Domain of unknown function (DUF1845) 1 176 1.4E-63 T 15-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 XDD1_1383 1aad9c6e090d77ae8035ae4786c2abf7 185 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 1 176 3.7E-59 T 15-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 XDD1_0922 d8429e736ed21effb877ade43c05aa68 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 7.1E-6 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XDD1_0922 d8429e736ed21effb877ade43c05aa68 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 7.1E-6 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XDD1_0922 d8429e736ed21effb877ade43c05aa68 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 7.1E-6 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XDD1_0922 d8429e736ed21effb877ade43c05aa68 134 SUPERFAMILY SSF46955 1 126 8.42E-34 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily XDD1_0922 d8429e736ed21effb877ade43c05aa68 134 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 2.2E-53 T 15-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 XDD1_0922 d8429e736ed21effb877ade43c05aa68 134 Gene3D G3DSA:1.10.1660.10 1 125 1.9E-31 T 15-10-2018 XDD1_0922 d8429e736ed21effb877ade43c05aa68 134 Pfam PF13411 MerR HTH family regulatory protein 1 68 4.6E-18 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XDD1_0922 d8429e736ed21effb877ade43c05aa68 134 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XDD1_0922 d8429e736ed21effb877ade43c05aa68 134 SMART SM00422 1 70 8.2E-27 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XDD1_1860 0450089b8d23d2b7098c1f2879f3e45f 219 SMART SM00479 18 203 4.8E-34 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XDD1_1860 0450089b8d23d2b7098c1f2879f3e45f 219 Gene3D G3DSA:3.30.420.10 10 215 2.5E-56 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_1860 0450089b8d23d2b7098c1f2879f3e45f 219 Pfam PF00929 Exonuclease 20 194 1.8E-36 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XDD1_1860 0450089b8d23d2b7098c1f2879f3e45f 219 SUPERFAMILY SSF53098 9 207 2.58E-57 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_1860 0450089b8d23d2b7098c1f2879f3e45f 219 Hamap MF_00157 Ribonuclease T [rnt]. 1 219 115.725 T 15-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 XDD1_1860 0450089b8d23d2b7098c1f2879f3e45f 219 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 1.0E-106 T 15-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 XDD1_2329 87f41770e0cfa8c70f2da9e4e371319d 315 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 4.6E-19 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 XDD1_2329 87f41770e0cfa8c70f2da9e4e371319d 315 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 188 6.9E-58 T 15-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 XDD1_2329 87f41770e0cfa8c70f2da9e4e371319d 315 Gene3D G3DSA:1.20.1330.10 40 261 3.9E-55 T 15-10-2018 XDD1_2329 87f41770e0cfa8c70f2da9e4e371319d 315 SUPERFAMILY SSF64518 2 311 1.7E-46 T 15-10-2018 XDD1_3729 a95712b77772773890c5e610f51a7425 116 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 59 109 4.6E-8 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 XDD1_3937 4a52c74e6e800c1e0127556b84a95f9e 471 Gene3D G3DSA:1.20.1720.10 22 229 8.7E-27 T 15-10-2018 XDD1_3937 4a52c74e6e800c1e0127556b84a95f9e 471 SUPERFAMILY SSF103473 13 464 1.02E-39 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_3937 4a52c74e6e800c1e0127556b84a95f9e 471 Pfam PF07690 Major Facilitator Superfamily 26 387 3.6E-27 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_3937 4a52c74e6e800c1e0127556b84a95f9e 471 Gene3D G3DSA:1.20.1250.20 268 470 4.8E-8 T 15-10-2018 XDD1_2736 f73f1bbbdf34674f28d164613d2e598b 189 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 6 188 2.0E-59 T 15-10-2018 IPR010938 Protein of unknown function DUF1131 XDD1_2736 f73f1bbbdf34674f28d164613d2e598b 189 Gene3D G3DSA:2.60.460.10 24 189 8.4E-65 T 15-10-2018 IPR038714 YfeY-like superfamily XDD1_2736 f73f1bbbdf34674f28d164613d2e598b 189 Pfam PF06572 Protein of unknown function (DUF1131) 23 188 1.4E-73 T 15-10-2018 IPR010938 Protein of unknown function DUF1131 XDD1_3001 04f9552e89de1c0be70da29e01bd2c0a 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 3.2E-116 T 15-10-2018 IPR031347 Protein AmpE XDD1_1019 4e01dc363c232fae0487dd0cfe314bba 255 Gene3D G3DSA:3.20.20.60 1 255 4.7E-95 T 15-10-2018 XDD1_1019 4e01dc363c232fae0487dd0cfe314bba 255 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 242 7.9E-65 T 15-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 XDD1_1019 4e01dc363c232fae0487dd0cfe314bba 255 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 6 253 1.1E-129 T 15-10-2018 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 XDD1_1019 4e01dc363c232fae0487dd0cfe314bba 255 SUPERFAMILY SSF51621 3 251 1.88E-84 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XDD1_0763 80ff3b40dfd3f840ad393fee20b74f71 195 SUPERFAMILY SSF52507 11 171 9.42E-35 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 XDD1_0763 80ff3b40dfd3f840ad393fee20b74f71 195 Gene3D G3DSA:3.40.50.1950 11 191 2.1E-34 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 XDD1_0763 80ff3b40dfd3f840ad393fee20b74f71 195 Pfam PF02441 Flavoprotein 13 182 9.5E-29 T 15-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 XDD1_2953 4c74569c43033042ade9e85f8661e67c 577 Gene3D G3DSA:3.10.310.30 328 456 2.4E-30 T 15-10-2018 XDD1_2953 4c74569c43033042ade9e85f8661e67c 577 Gene3D G3DSA:3.90.1640.30 48 326 6.6E-91 T 15-10-2018 XDD1_2953 4c74569c43033042ade9e85f8661e67c 577 Pfam PF02272 DHHA1 domain 322 452 6.3E-27 T 15-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 XDD1_2953 4c74569c43033042ade9e85f8661e67c 577 Gene3D G3DSA:2.40.50.460 457 576 1.7E-6 T 15-10-2018 XDD1_2953 4c74569c43033042ade9e85f8661e67c 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 573 8.6E-158 T 15-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 XDD1_2953 4c74569c43033042ade9e85f8661e67c 577 Pfam PF01368 DHH family 74 205 2.4E-10 T 15-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 XDD1_2953 4c74569c43033042ade9e85f8661e67c 577 SUPERFAMILY SSF64182 48 464 1.83E-116 T 15-10-2018 IPR038763 DHH phosphoesterase superfamily XDD1_2747 e1c0c8c0362e3b852c60e32875493c96 131 Pfam PF06836 Protein of unknown function (DUF1240) 37 131 2.1E-35 T 15-10-2018 IPR010665 Protein of unknown function DUF1240 XDD1_3769 7f1bbbe9e825cb17e772482195090b7e 325 Pfam PF03631 Virulence factor BrkB 61 322 4.8E-45 T 15-10-2018 IPR017039 Virulence factor BrkB XDD1_3769 7f1bbbe9e825cb17e772482195090b7e 325 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 48 322 1.5E-115 T 15-10-2018 IPR005274 Inner membrane protein YhjD XDD1_3769 7f1bbbe9e825cb17e772482195090b7e 325 PIRSF PIRSF035875 39 325 4.8E-23 T 15-10-2018 IPR017039 Virulence factor BrkB XDD1_2426 84d759f09706250fac92968101f9b66d 434 Pfam PF00860 Permease family 16 382 5.2E-106 T 15-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 XDD1_2426 84d759f09706250fac92968101f9b66d 434 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 12 404 8.2E-127 T 15-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 XDD1_2426 84d759f09706250fac92968101f9b66d 434 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 15-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 XDD1_0586 137926327e4227879fbefd5c958c9c71 251 PIRSF PIRSF015736 1 251 1.0E-62 T 15-10-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase XDD1_0586 137926327e4227879fbefd5c958c9c71 251 Hamap MF_00943 Maleate isomerase [maiA]. 7 251 49.071 T 15-10-2018 IPR028615 Maleate isomerase GO:0050076 KEGG: 00650+5.2.1.1|KEGG: 00760+5.2.1.1|MetaCyc: PWY-5033|MetaCyc: PWY-6993|MetaCyc: PWY-7128|MetaCyc: PWY-722 XDD1_0586 137926327e4227879fbefd5c958c9c71 251 Gene3D G3DSA:3.40.50.12500 7 251 1.9E-80 T 15-10-2018 XDD1_0394 bccb6f9c4082f5df85c498cffa11701f 236 Pfam PF16715 Cyclodipeptide synthase 20 198 1.2E-16 T 15-10-2018 IPR030903 Cyclodipeptide synthase GO:0016755 XDD1_1394 85aef2aa886e15b5b01fa284ae56eaf4 233 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 38 227 3.3E-80 T 15-10-2018 IPR022293 Integrating conjugative element protein, PFL4693 XDD1_2984 29993680f4fc3e26d31b74aaea8e14d4 219 Gene3D G3DSA:3.30.70.260 125 196 8.1E-77 T 15-10-2018 XDD1_2984 29993680f4fc3e26d31b74aaea8e14d4 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 1.2E-59 T 15-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 XDD1_2984 29993680f4fc3e26d31b74aaea8e14d4 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 1.6E-69 T 15-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 XDD1_2984 29993680f4fc3e26d31b74aaea8e14d4 219 Gene3D G3DSA:3.40.50.1360 7 207 8.1E-77 T 15-10-2018 XDD1_2984 29993680f4fc3e26d31b74aaea8e14d4 219 SUPERFAMILY SSF100950 1 146 1.07E-47 T 15-10-2018 IPR037171 NagB/RpiA transferase-like XDD1_2984 29993680f4fc3e26d31b74aaea8e14d4 219 SUPERFAMILY SSF75445 127 198 1.09E-23 T 15-10-2018 XDD1_2984 29993680f4fc3e26d31b74aaea8e14d4 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.366 T 15-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 XDD1_3507 05df3da5f31679ea3ef1e9cf1530db75 166 Pfam PF04386 Stringent starvation protein B 9 166 4.4E-42 T 15-10-2018 IPR007481 Stringent starvation protein B XDD1_3507 05df3da5f31679ea3ef1e9cf1530db75 166 Gene3D G3DSA:2.30.30.220 2 129 1.2E-52 T 15-10-2018 IPR036760 SspB-like superfamily XDD1_3507 05df3da5f31679ea3ef1e9cf1530db75 166 PIRSF PIRSF005276 3 166 1.1E-59 T 15-10-2018 IPR007481 Stringent starvation protein B XDD1_3507 05df3da5f31679ea3ef1e9cf1530db75 166 SUPERFAMILY SSF101738 3 115 7.06E-49 T 15-10-2018 IPR036760 SspB-like superfamily XDD1_2797 3e2c142e238272682a75b0f91ed5f7b8 291 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 46 245 8.0E-65 T 15-10-2018 XDD1_2797 3e2c142e238272682a75b0f91ed5f7b8 291 Pfam PF13942 YfhG lipoprotein 74 248 1.4E-72 T 15-10-2018 IPR025262 Quorum-sensing regulator protein G XDD1_1318 1bf9a7387151319e4f2816c895b43595 513 SUPERFAMILY SSF51905 190 415 8.64E-6 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1318 1bf9a7387151319e4f2816c895b43595 513 Pfam PF13454 FAD-NAD(P)-binding 10 159 1.6E-20 T 15-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain XDD1_1318 1bf9a7387151319e4f2816c895b43595 513 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.8E-5 T 15-10-2018 XDD1_1318 1bf9a7387151319e4f2816c895b43595 513 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 197 222 2.8E-5 T 15-10-2018 XDD1_1318 1bf9a7387151319e4f2816c895b43595 513 SUPERFAMILY SSF51905 7 234 1.88E-13 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_3784 94ff8ca399c925528dba91401a88e2ea 389 SUPERFAMILY SSF51905 50 384 3.88E-8 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_1855 e137d5f8e9d0dcb4870ca9fc1c98bb49 393 Gene3D G3DSA:1.20.1720.10 10 385 2.6E-79 T 15-10-2018 XDD1_1855 e137d5f8e9d0dcb4870ca9fc1c98bb49 393 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 384 2.2E-101 T 15-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 XDD1_1855 e137d5f8e9d0dcb4870ca9fc1c98bb49 393 Pfam PF07690 Major Facilitator Superfamily 17 345 4.2E-44 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_1855 e137d5f8e9d0dcb4870ca9fc1c98bb49 393 SUPERFAMILY SSF103473 5 382 1.18E-63 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0882 79f8e477f9c8923d1701a9d962641bdc 128 Pfam PF12836 Helix-hairpin-helix motif 64 127 1.3E-21 T 15-10-2018 XDD1_0882 79f8e477f9c8923d1701a9d962641bdc 128 SUPERFAMILY SSF47781 59 127 6.56E-27 T 15-10-2018 IPR010994 RuvA domain 2-like XDD1_0882 79f8e477f9c8923d1701a9d962641bdc 128 Gene3D G3DSA:1.10.150.280 58 127 7.6E-21 T 15-10-2018 XDD1_0882 79f8e477f9c8923d1701a9d962641bdc 128 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 66 127 1.6E-27 T 15-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain XDD1_0513 fa61a5edc74f5f33d20ec627a20f2a77 142 SUPERFAMILY SSF69118 2 138 5.89E-33 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 XDD1_0513 fa61a5edc74f5f33d20ec627a20f2a77 142 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 90 3.6E-8 T 15-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 XDD1_0513 fa61a5edc74f5f33d20ec627a20f2a77 142 Gene3D G3DSA:1.20.1290.10 1 141 3.3E-36 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 XDD1_2168 f0fd96de9e271bcd5c80de5bf819bb9f 308 SUPERFAMILY SSF55909 22 297 8.94E-25 T 15-10-2018 XDD1_2168 f0fd96de9e271bcd5c80de5bf819bb9f 308 Gene3D G3DSA:3.75.10.10 21 301 9.3E-40 T 15-10-2018 XDD1_3691 418d8c01b31a2d82d3059e8476da68a2 99 Hamap MF_02051 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [lsrG]. 1 96 38.951 T 15-10-2018 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase GO:0016853 XDD1_3691 418d8c01b31a2d82d3059e8476da68a2 99 SUPERFAMILY SSF54909 1 91 1.88E-25 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel XDD1_3691 418d8c01b31a2d82d3059e8476da68a2 99 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 1.2E-18 T 15-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain XDD1_3691 418d8c01b31a2d82d3059e8476da68a2 99 Gene3D G3DSA:3.30.70.100 1 96 7.5E-39 T 15-10-2018 XDD1_3185 23844a19fccf5ffc267af42ae0b1b614 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 2.3E-127 T 15-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 XDD1_3185 23844a19fccf5ffc267af42ae0b1b614 483 Pfam PF02386 Cation transport protein 37 477 3.9E-91 T 15-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 XDD1_3185 23844a19fccf5ffc267af42ae0b1b614 483 PIRSF PIRSF006247 1 483 6.4E-185 T 15-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 XDD1_1346 4427d15727240351c68389e0f8be388d 523 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 4.8E-173 T 15-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 XDD1_1346 4427d15727240351c68389e0f8be388d 523 PIRSF PIRSF006446 1 522 7.8E-142 T 15-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 XDD1_3580 79c43bd5d42d570f29c29cc30e668ac5 93 Pfam PF06611 Protein of unknown function (DUF1145) 1 58 1.9E-25 T 15-10-2018 IPR009525 Protein of unknown function DUF1145 XDD1_2619 6c27d7d627b7089f59c9cd51ef4c4380 435 Gene3D G3DSA:2.40.160.60 26 435 1.0E-140 T 15-10-2018 XDD1_2619 6c27d7d627b7089f59c9cd51ef4c4380 435 SUPERFAMILY SSF56935 26 435 5.04E-104 T 15-10-2018 XDD1_2619 6c27d7d627b7089f59c9cd51ef4c4380 435 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 435 2.4E-138 T 15-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) XDD1_2097 3f23f3e852a69eaf569fd3d5fa0ced7a 874 Pfam PF11739 Dicarboxylate transport 661 862 7.2E-60 T 15-10-2018 IPR021730 Dicarboxylate transport XDD1_3311 e531a9f4fb67c79691ddaa61140e5b3f 128 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 31.494 T 15-10-2018 IPR020911 Uncharacterised protein family UPF0325 XDD1_3311 e531a9f4fb67c79691ddaa61140e5b3f 128 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 7.0E-61 T 15-10-2018 IPR020911 Uncharacterised protein family UPF0325 XDD1_3311 e531a9f4fb67c79691ddaa61140e5b3f 128 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 5.4E-54 T 15-10-2018 IPR020911 Uncharacterised protein family UPF0325 XDD1_2618 24c2cb878b3e78fc10493a63885ac554 250 PRINTS PR01805 VacJ lipoprotein signature 139 156 1.5E-32 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XDD1_2618 24c2cb878b3e78fc10493a63885ac554 250 PRINTS PR01805 VacJ lipoprotein signature 100 117 1.5E-32 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XDD1_2618 24c2cb878b3e78fc10493a63885ac554 250 PRINTS PR01805 VacJ lipoprotein signature 31 44 1.5E-32 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XDD1_2618 24c2cb878b3e78fc10493a63885ac554 250 PRINTS PR01805 VacJ lipoprotein signature 49 65 1.5E-32 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XDD1_2618 24c2cb878b3e78fc10493a63885ac554 250 Pfam PF04333 MlaA lipoprotein 30 223 8.8E-67 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XDD1_3946 76d03c25b4b6d141272031160488fc1f 58 Pfam PF06836 Protein of unknown function (DUF1240) 4 57 4.8E-24 T 15-10-2018 IPR010665 Protein of unknown function DUF1240 XDD1_2602 36182f89c1189f841d6f56d4b74161f3 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 5.3E-59 T 15-10-2018 IPR007334 Uncharacterised protein family UPF0208 XDD1_2602 36182f89c1189f841d6f56d4b74161f3 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 35.614 T 15-10-2018 IPR007334 Uncharacterised protein family UPF0208 XDD1_1544 b9a9d6fa1eae1f727848f4f6740a64ee 300 Pfam PF03956 Lysine exporter LysO 114 298 6.0E-56 T 15-10-2018 IPR005642 Lysine exporter LysO XDD1_1544 b9a9d6fa1eae1f727848f4f6740a64ee 300 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 135 297 3.0E-62 T 15-10-2018 IPR005642 Lysine exporter LysO XDD1_1683 d0688a0106a02e4ebb630d8821c62036 245 Gene3D G3DSA:2.30.110.20 3 157 1.0E-46 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_1683 d0688a0106a02e4ebb630d8821c62036 245 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 153 1.3E-51 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_1683 d0688a0106a02e4ebb630d8821c62036 245 SUPERFAMILY SSF141452 5 152 8.5E-30 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_1683 d0688a0106a02e4ebb630d8821c62036 245 Pfam PF05638 Type VI secretion system effector, Hcp 6 143 2.4E-19 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_0239 23acaf3c3dc198592b9f1f929e976edd 358 Gene3D G3DSA:3.30.470.20 101 357 2.3E-37 T 15-10-2018 XDD1_0239 23acaf3c3dc198592b9f1f929e976edd 358 Pfam PF13535 ATP-grasp domain 140 288 5.2E-12 T 15-10-2018 XDD1_0239 23acaf3c3dc198592b9f1f929e976edd 358 SUPERFAMILY SSF56059 109 309 1.89E-25 T 15-10-2018 XDD1_1139 11fd988ff8795d1abaef1d5e597c65ec 245 Pfam PF11101 Protein of unknown function (DUF2884) 28 245 2.0E-38 T 15-10-2018 IPR021307 Protein of unknown function DUF2884 XDD1_1724 840ce72818936aa5d4f298c96549f7e8 507 Pfam PF07730 Histidine kinase 304 367 6.7E-9 T 15-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 XDD1_1724 840ce72818936aa5d4f298c96549f7e8 507 SMART SM00387 411 507 2.9E-5 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_1724 840ce72818936aa5d4f298c96549f7e8 507 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 414 505 1.8E-6 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XDD1_1724 840ce72818936aa5d4f298c96549f7e8 507 Pfam PF05231 MASE1 13 276 9.9E-14 T 15-10-2018 IPR007895 MASE1 XDD1_1724 840ce72818936aa5d4f298c96549f7e8 507 SUPERFAMILY SSF55874 373 505 5.76E-14 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_1724 840ce72818936aa5d4f298c96549f7e8 507 Gene3D G3DSA:3.30.565.10 371 506 3.1E-25 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XDD1_3490 4e2becb47cd89b85c34702db9f1716b1 302 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 2.8E-107 T 15-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 XDD1_3490 4e2becb47cd89b85c34702db9f1716b1 302 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 212 3.6E-28 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 XDD1_3490 4e2becb47cd89b85c34702db9f1716b1 302 PIRSF PIRSF005917 2 288 4.4E-107 T 15-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 XDD1_3490 4e2becb47cd89b85c34702db9f1716b1 302 SUPERFAMILY SSF53790 12 232 5.37E-84 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 XDD1_3490 4e2becb47cd89b85c34702db9f1716b1 302 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 37.853 T 15-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 XDD1_3490 4e2becb47cd89b85c34702db9f1716b1 302 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 15-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 XDD1_3490 4e2becb47cd89b85c34702db9f1716b1 302 Gene3D G3DSA:3.40.1010.10 1 120 9.7E-47 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 XDD1_3490 4e2becb47cd89b85c34702db9f1716b1 302 Gene3D G3DSA:3.30.950.10 121 241 1.7E-42 T 15-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 XDD1_1215 325c18c650d4b0bad73bbe6a65c5a5d3 517 Pfam PF13454 FAD-NAD(P)-binding 8 171 8.0E-26 T 15-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain XDD1_1215 325c18c650d4b0bad73bbe6a65c5a5d3 517 SUPERFAMILY SSF51905 2 240 3.37E-9 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_2317 280a0dec71dd081931db6da7d1be5306 181 Pfam PF03748 Flagellar basal body-associated protein FliL 79 179 4.8E-21 T 15-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 XDD1_2768 c6b4275e88101e6d4864b3cdf78e4e10 206 PIRSF PIRSF006170 1 206 3.8E-54 T 15-10-2018 IPR026039 Uncharacterised protein family UPF0070 XDD1_2768 c6b4275e88101e6d4864b3cdf78e4e10 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 2.9E-54 T 15-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 XDD1_2083 807271bbd87bb2dbbcd07450c3b6e8e9 194 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 15 178 1.1E-51 T 15-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 XDD1_2083 807271bbd87bb2dbbcd07450c3b6e8e9 194 PIRSF PIRSF004982 7 191 1.6E-42 T 15-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 XDD1_2083 807271bbd87bb2dbbcd07450c3b6e8e9 194 Pfam PF03843 Outer membrane lipoprotein Slp family 22 170 1.1E-44 T 15-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 XDD1_0626 6aa913274f28864f9fe981c3638cfa26 377 PIRSF PIRSF037118 1 377 1.1E-159 T 15-10-2018 IPR017115 Tellurite resistance, TerA XDD1_0626 6aa913274f28864f9fe981c3638cfa26 377 Pfam PF02342 TerD domain 26 159 2.2E-28 T 15-10-2018 IPR003325 TerD domain XDD1_0626 6aa913274f28864f9fe981c3638cfa26 377 Gene3D G3DSA:2.60.60.30 16 158 2.0E-32 T 15-10-2018 XDD1_3852 729ac769feb71832e75349946d7477d0 238 Gene3D G3DSA:1.20.58.220 1 116 2.4E-38 T 15-10-2018 IPR038078 PhoU-like domain superfamily XDD1_3852 729ac769feb71832e75349946d7477d0 238 PIRSF PIRSF003107 7 226 5.3E-65 T 15-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 XDD1_3852 729ac769feb71832e75349946d7477d0 238 Pfam PF01895 PhoU domain 128 212 9.6E-18 T 15-10-2018 IPR026022 PhoU domain XDD1_3852 729ac769feb71832e75349946d7477d0 238 Pfam PF01895 PhoU domain 27 111 4.9E-18 T 15-10-2018 IPR026022 PhoU domain XDD1_3852 729ac769feb71832e75349946d7477d0 238 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 3.9E-72 T 15-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 XDD1_3852 729ac769feb71832e75349946d7477d0 238 Gene3D G3DSA:1.20.58.220 119 236 7.7E-34 T 15-10-2018 IPR038078 PhoU-like domain superfamily XDD1_3852 729ac769feb71832e75349946d7477d0 238 SUPERFAMILY SSF109755 13 230 4.6E-67 T 15-10-2018 XDD1_3850 395e64c99b65bde4c0590b0be30c9d2a 245 SUPERFAMILY SSF161098 18 226 2.75E-43 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_3850 395e64c99b65bde4c0590b0be30c9d2a 245 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 85 1.2E-19 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 XDD1_3850 395e64c99b65bde4c0590b0be30c9d2a 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 239 6.3E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XDD1_3850 395e64c99b65bde4c0590b0be30c9d2a 245 Gene3D G3DSA:1.10.3720.10 11 241 5.6E-51 T 15-10-2018 IPR035906 MetI-like superfamily XDD1_0128 1ba2d3853bd4e1cc1c3867dcd2d86a87 67 Gene3D G3DSA:3.40.50.2000 1 31 1.3E-6 T 15-10-2018 XDD1_2739 61102ab0861246639b670709c9a17449 140 Gene3D G3DSA:3.40.630.30 1 138 3.2E-36 T 15-10-2018 XDD1_2739 61102ab0861246639b670709c9a17449 140 Pfam PF00583 Acetyltransferase (GNAT) family 13 122 1.7E-15 T 15-10-2018 IPR000182 GNAT domain XDD1_2739 61102ab0861246639b670709c9a17449 140 SUPERFAMILY SSF55729 1 130 5.4E-26 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_2411 900147bdf0da88e699a87f478dc83c2c 220 Gene3D G3DSA:3.30.1380.10 4 197 3.4E-34 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 XDD1_2411 900147bdf0da88e699a87f478dc83c2c 220 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 21 177 4.6E-38 T 15-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 XDD1_2411 900147bdf0da88e699a87f478dc83c2c 220 SUPERFAMILY SSF55166 15 179 4.55E-18 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 XDD1_1844 bb9f5ca766ae6d85735c98c1d4a1faa9 385 Pfam PF01594 AI-2E family transporter 31 361 4.6E-48 T 15-10-2018 IPR002549 Transmembrane protein TqsA-like XDD1_1985 1c208a1db2f3df2042927a4e3473d220 313 PIRSF PIRSF001522 1 313 1.7E-111 T 15-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 XDD1_1985 1c208a1db2f3df2042927a4e3473d220 313 Gene3D G3DSA:2.40.128.90 23 313 2.6E-103 T 15-10-2018 XDD1_1985 1c208a1db2f3df2042927a4e3473d220 313 SUPERFAMILY SSF69917 26 313 1.31E-87 T 15-10-2018 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 XDD1_1985 1c208a1db2f3df2042927a4e3473d220 313 PRINTS PR00482 Omptin serine protease signature 84 109 1.8E-65 T 15-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 XDD1_1985 1c208a1db2f3df2042927a4e3473d220 313 PRINTS PR00482 Omptin serine protease signature 209 230 1.8E-65 T 15-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 XDD1_1985 1c208a1db2f3df2042927a4e3473d220 313 PRINTS PR00482 Omptin serine protease signature 235 255 1.8E-65 T 15-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 XDD1_1985 1c208a1db2f3df2042927a4e3473d220 313 PRINTS PR00482 Omptin serine protease signature 144 171 1.8E-65 T 15-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 XDD1_1985 1c208a1db2f3df2042927a4e3473d220 313 PRINTS PR00482 Omptin serine protease signature 116 143 1.8E-65 T 15-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 XDD1_1985 1c208a1db2f3df2042927a4e3473d220 313 PRINTS PR00482 Omptin serine protease signature 37 51 1.8E-65 T 15-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 XDD1_1985 1c208a1db2f3df2042927a4e3473d220 313 PRINTS PR00482 Omptin serine protease signature 256 276 1.8E-65 T 15-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 XDD1_1985 1c208a1db2f3df2042927a4e3473d220 313 PRINTS PR00482 Omptin serine protease signature 187 208 1.8E-65 T 15-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 XDD1_1985 1c208a1db2f3df2042927a4e3473d220 313 Pfam PF01278 Omptin family 31 313 1.5E-101 T 15-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 XDD1_2888 232eda14b806ea4166939235fde08960 209 SUPERFAMILY SSF52833 3 80 4.66E-18 T 15-10-2018 IPR036249 Thioredoxin-like superfamily XDD1_2888 232eda14b806ea4166939235fde08960 209 Gene3D G3DSA:1.20.1050.10 81 190 6.4E-33 T 15-10-2018 XDD1_2888 232eda14b806ea4166939235fde08960 209 Pfam PF13409 Glutathione S-transferase, N-terminal domain 12 77 3.4E-11 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 XDD1_2888 232eda14b806ea4166939235fde08960 209 Gene3D G3DSA:3.40.30.10 1 79 1.2E-17 T 15-10-2018 XDD1_2888 232eda14b806ea4166939235fde08960 209 SUPERFAMILY SSF47616 82 199 8.35E-19 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily XDD1_2888 232eda14b806ea4166939235fde08960 209 Pfam PF13410 Glutathione S-transferase, C-terminal domain 126 199 8.7E-7 T 15-10-2018 XDD1_0014 a049d69244f51ec448b4339bac87e5b3 196 Gene3D G3DSA:1.20.1540.10 49 187 6.3E-13 T 15-10-2018 IPR035952 Rhomboid-like superfamily XDD1_0014 a049d69244f51ec448b4339bac87e5b3 196 SUPERFAMILY SSF144091 10 181 1.7E-21 T 15-10-2018 XDD1_0014 a049d69244f51ec448b4339bac87e5b3 196 Pfam PF01694 Rhomboid family 49 179 1.5E-19 T 15-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 XDD1_0465 8610c8416e0ba00da955b79531a2cb78 94 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 88 1.3E-16 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XDD1_0465 8610c8416e0ba00da955b79531a2cb78 94 PIRSF PIRSF029218 1 94 7.2E-25 T 15-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 XDD1_0465 8610c8416e0ba00da955b79531a2cb78 94 Gene3D G3DSA:3.30.2310.20 1 93 1.8E-24 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XDD1_1603 c63f1faa03266b8397fca533191311d7 204 Gene3D G3DSA:3.40.50.10610 28 195 2.7E-7 T 15-10-2018 XDD1_1603 c63f1faa03266b8397fca533191311d7 204 SUPERFAMILY SSF159594 58 200 1.31E-24 T 15-10-2018 XDD1_1603 c63f1faa03266b8397fca533191311d7 204 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 47 197 1.4E-31 T 15-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component XDD1_3530 b1c6fd5182bffb800ec76f529b33eb48 155 Gene3D G3DSA:3.40.930.10 1 155 6.7E-58 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 XDD1_3530 b1c6fd5182bffb800ec76f529b33eb48 155 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 57 73 - T 15-10-2018 IPR002178 PTS EIIA type-2 domain XDD1_3530 b1c6fd5182bffb800ec76f529b33eb48 155 SUPERFAMILY SSF55804 9 155 3.01E-40 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 XDD1_3530 b1c6fd5182bffb800ec76f529b33eb48 155 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 9 155 1.3E-56 T 15-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 XDD1_3530 b1c6fd5182bffb800ec76f529b33eb48 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 12 154 2.4E-37 T 15-10-2018 IPR002178 PTS EIIA type-2 domain XDD1_3420 0af748e6458dc1b2e1c48538cfca4ab8 139 SUPERFAMILY SSF143100 1 62 2.49E-9 T 15-10-2018 IPR035069 TTHA1013/TTHA0281-like XDD1_3420 0af748e6458dc1b2e1c48538cfca4ab8 139 Gene3D G3DSA:3.30.160.250 1 81 2.8E-13 T 15-10-2018 XDD1_2366 09cf3617ab4453bee9a5306203fb7fc7 266 Pfam PF00561 alpha/beta hydrolase fold 30 146 3.6E-14 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_2366 09cf3617ab4453bee9a5306203fb7fc7 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 7.3E-9 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_2366 09cf3617ab4453bee9a5306203fb7fc7 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 113 126 7.3E-9 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_2366 09cf3617ab4453bee9a5306203fb7fc7 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 7.3E-9 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_2366 09cf3617ab4453bee9a5306203fb7fc7 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 55 70 7.3E-9 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_2366 09cf3617ab4453bee9a5306203fb7fc7 266 Gene3D G3DSA:3.40.50.1820 4 266 1.7E-44 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2366 09cf3617ab4453bee9a5306203fb7fc7 266 SUPERFAMILY SSF53474 14 266 2.04E-42 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_2339 af2ad72ff322d9651b2465339d25a156 138 PIRSF PIRSF002889 1 137 1.4E-39 T 15-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 XDD1_2339 af2ad72ff322d9651b2465339d25a156 138 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 6.1E-40 T 15-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 XDD1_2339 af2ad72ff322d9651b2465339d25a156 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 15-10-2018 IPR019776 Flagellar basal body rod protein, conserved site XDD1_2339 af2ad72ff322d9651b2465339d25a156 138 Pfam PF00460 Flagella basal body rod protein 10 39 1.2E-9 T 15-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 XDD1_2856 fe7294fb4b711bbdeab3abb87de0a95a 132 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 7 102 3.3E-25 T 15-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 XDD1_0758 e87cc9f24ffe8471dc8962557d78a29c 281 SUPERFAMILY SSF103481 37 136 2.75E-14 T 15-10-2018 XDD1_0758 e87cc9f24ffe8471dc8962557d78a29c 281 SUPERFAMILY SSF103481 180 280 1.7E-13 T 15-10-2018 XDD1_0758 e87cc9f24ffe8471dc8962557d78a29c 281 Pfam PF00892 EamA-like transporter family 7 131 5.9E-8 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_0758 e87cc9f24ffe8471dc8962557d78a29c 281 Pfam PF00892 EamA-like transporter family 145 277 2.1E-12 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_0758 e87cc9f24ffe8471dc8962557d78a29c 281 Gene3D G3DSA:1.10.3730.20 35 137 6.0E-6 T 15-10-2018 XDD1_2307 a15004c2b694f332c9c9f341912bf4e7 84 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 84 2.2E-25 T 15-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ XDD1_2307 a15004c2b694f332c9c9f341912bf4e7 84 Pfam PF04221 RelB antitoxin 1 66 1.8E-16 T 15-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ XDD1_2307 a15004c2b694f332c9c9f341912bf4e7 84 Gene3D G3DSA:1.10.1220.10 1 84 1.6E-33 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 XDD1_3196 d7a1961327e5aef7ea36e849a8fed8bf 88 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 9.1E-23 T 15-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 XDD1_3196 d7a1961327e5aef7ea36e849a8fed8bf 88 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 84 24.423 T 15-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 XDD1_3196 d7a1961327e5aef7ea36e849a8fed8bf 88 Pfam PF02416 mttA/Hcf106 family 4 54 9.6E-15 T 15-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 XDD1_2279 7674426f405ae3d558b9164d019b6a22 105 TIGRFAM TIGR01594 holin_lambda: phage holin, lambda family 1 103 1.4E-34 T 15-10-2018 IPR006481 Bacteriophage lambda, GpS, holin XDD1_2279 7674426f405ae3d558b9164d019b6a22 105 Pfam PF05106 Phage holin family (Lysis protein S) 3 100 1.6E-33 T 15-10-2018 IPR006481 Bacteriophage lambda, GpS, holin XDD1_1306 35922a16be85bf8f518ebe3887223e1c 82 Pfam PF07362 Post-segregation antitoxin CcdA 12 76 5.4E-19 T 15-10-2018 IPR009956 Post-segregation antitoxin CcdA XDD1_3785 09ac65731ca31a30ad89d6218287aa9f 99 Pfam PF13454 FAD-NAD(P)-binding 4 96 1.5E-8 T 15-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain XDD1_2521 00cf5a5de18763e134853fb969d8b722 495 PIRSF PIRSF006060 1 492 2.0E-81 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XDD1_2521 00cf5a5de18763e134853fb969d8b722 495 Pfam PF00324 Amino acid permease 24 480 9.3E-145 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 XDD1_2521 00cf5a5de18763e134853fb969d8b722 495 Gene3D G3DSA:1.20.1740.10 15 486 2.6E-62 T 15-10-2018 XDD1_2521 00cf5a5de18763e134853fb969d8b722 495 ProSitePatterns PS00218 Amino acid permeases signature. 49 80 - T 15-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 XDD1_3493 628974e0fd6152383ce66e016b28bd56 196 SUPERFAMILY SSF53697 3 191 3.24E-50 T 15-10-2018 XDD1_3493 628974e0fd6152383ce66e016b28bd56 196 Gene3D G3DSA:3.40.50.10490 2 196 5.8E-68 T 15-10-2018 XDD1_3493 628974e0fd6152383ce66e016b28bd56 196 Pfam PF13580 SIS domain 9 144 1.4E-32 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XDD1_3454 7668884d7e0e47f4992350dab37efeb3 169 Pfam PF06892 Phage regulatory protein CII (CP76) 4 161 2.2E-65 T 15-10-2018 IPR009679 Bacteriophage 186, CII XDD1_1568 196f8c524ad95b85f1d869a685385cbc 587 Gene3D G3DSA:1.10.490.140 168 270 1.6E-5 T 15-10-2018 XDD1_1568 196f8c524ad95b85f1d869a685385cbc 587 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 1.3E-80 T 15-10-2018 IPR003776 YcaO-like domain XDD1_1568 196f8c524ad95b85f1d869a685385cbc 587 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 3.4E-158 T 15-10-2018 IPR003776 YcaO-like domain XDD1_1105 c2bf7a601638eb213a278e1064717be6 479 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 47 469 8.8E-161 T 15-10-2018 IPR021204 Integrating conjugative element protein, PFL4711 XDD1_0561 f256225f1e30911566ec6a0da536cbe0 90 Gene3D G3DSA:2.10.260.10 1 89 5.9E-6 T 15-10-2018 XDD1_0561 f256225f1e30911566ec6a0da536cbe0 90 SUPERFAMILY SSF89447 3 66 7.85E-8 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily XDD1_1535 db835292a499ac6547fc8ecded326ad0 87 SUPERFAMILY SSF52833 4 82 1.7E-21 T 15-10-2018 IPR036249 Thioredoxin-like superfamily XDD1_1535 db835292a499ac6547fc8ecded326ad0 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 3.4E-49 T 15-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 XDD1_1535 db835292a499ac6547fc8ecded326ad0 87 PRINTS PR00160 Glutaredoxin signature 66 79 3.1E-12 T 15-10-2018 IPR014025 Glutaredoxin subgroup XDD1_1535 db835292a499ac6547fc8ecded326ad0 87 PRINTS PR00160 Glutaredoxin signature 52 65 3.1E-12 T 15-10-2018 IPR014025 Glutaredoxin subgroup XDD1_1535 db835292a499ac6547fc8ecded326ad0 87 PRINTS PR00160 Glutaredoxin signature 3 21 3.1E-12 T 15-10-2018 IPR014025 Glutaredoxin subgroup XDD1_1535 db835292a499ac6547fc8ecded326ad0 87 Gene3D G3DSA:3.40.30.10 2 85 8.1E-25 T 15-10-2018 XDD1_1535 db835292a499ac6547fc8ecded326ad0 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 15-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 XDD1_1535 db835292a499ac6547fc8ecded326ad0 87 Pfam PF00462 Glutaredoxin 4 69 4.2E-17 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 XDD1_1273 b684735b101dcfbd283b76f3e107cbd0 105 Gene3D G3DSA:3.30.460.10 2 105 3.2E-36 T 15-10-2018 XDD1_1273 b684735b101dcfbd283b76f3e107cbd0 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 1.0E-28 T 15-10-2018 XDD1_1273 b684735b101dcfbd283b76f3e107cbd0 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.121 T 15-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS XDD1_1273 b684735b101dcfbd283b76f3e107cbd0 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 3.2E-37 T 15-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS XDD1_1273 b684735b101dcfbd283b76f3e107cbd0 105 SUPERFAMILY SSF81301 4 105 9.32E-37 T 15-10-2018 XDD1_1049 6ecf834382c708c28a5f80a6734c9a34 2133 Pfam PF12920 TcdA/TcdB pore forming domain 749 1412 5.5E-301 T 15-10-2018 IPR024769 TcdA/TcdB toxin, pore forming domain GO:0009405 XDD1_1049 6ecf834382c708c28a5f80a6734c9a34 2133 Gene3D G3DSA:2.150.10.10 1927 2058 6.8E-6 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XDD1_3260 eb27c14267c7331310a63ad265ed6d89 284 Pfam PF01040 UbiA prenyltransferase family 24 267 4.6E-64 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 XDD1_3260 eb27c14267c7331310a63ad265ed6d89 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 6 283 1.8E-110 T 15-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 XDD1_3260 eb27c14267c7331310a63ad265ed6d89 284 Gene3D G3DSA:1.10.357.140 15 178 7.6E-39 T 15-10-2018 XDD1_3260 eb27c14267c7331310a63ad265ed6d89 284 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 63 85 - T 15-10-2018 IPR030470 UbiA prenyltransferase conserved site XDD1_3260 eb27c14267c7331310a63ad265ed6d89 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.971 T 15-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 XDD1_0869 915f6c86e8d3b46128a125ce5b0ebded 255 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 34 255 6.7E-46 T 15-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 XDD1_0869 915f6c86e8d3b46128a125ce5b0ebded 255 SUPERFAMILY SSF111364 26 255 9.42E-34 T 15-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 XDD1_3579 de318445d49a81457ceeae2463bd7419 192 Pfam PF03602 Conserved hypothetical protein 95 13 188 2.7E-63 T 15-10-2018 XDD1_3579 de318445d49a81457ceeae2463bd7419 192 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 125 131 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XDD1_3579 de318445d49a81457ceeae2463bd7419 192 SUPERFAMILY SSF53335 12 190 3.0E-56 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_3579 de318445d49a81457ceeae2463bd7419 192 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 190 7.4E-66 T 15-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 XDD1_3579 de318445d49a81457ceeae2463bd7419 192 PIRSF PIRSF004553 12 191 1.0E-58 T 15-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 XDD1_3579 de318445d49a81457ceeae2463bd7419 192 Gene3D G3DSA:3.40.50.150 1 191 1.4E-64 T 15-10-2018 XDD1_3097 240cb6b7e3131873a0cde88c584065e2 118 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 25 109 1.5E-10 T 15-10-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like XDD1_3097 240cb6b7e3131873a0cde88c584065e2 118 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 16 118 9.0E-33 T 15-10-2018 XDD1_3097 240cb6b7e3131873a0cde88c584065e2 118 Gene3D G3DSA:1.20.58.1630 26 118 6.7E-10 T 15-10-2018 IPR038432 PulS/OutS-like superfamily XDD1_1661 8edf71b7266eca077b5cc7f73120e86e 389 Gene3D G3DSA:3.40.710.10 5 387 2.5E-91 T 15-10-2018 XDD1_1661 8edf71b7266eca077b5cc7f73120e86e 389 Pfam PF00144 Beta-lactamase 26 373 5.4E-44 T 15-10-2018 IPR001466 Beta-lactamase-related XDD1_1661 8edf71b7266eca077b5cc7f73120e86e 389 SUPERFAMILY SSF56601 13 385 2.25E-67 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XDD1_1439 171ebfc85155525bbba18be8a8b0d5da 385 Pfam PF04235 Protein of unknown function (DUF418) 221 379 3.1E-39 T 15-10-2018 IPR007349 Domain of unknown function DUF418 XDD1_0959 4b462b5768665236152dd3a0be5f2d02 385 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 196 265 5.6E-24 T 15-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 XDD1_0959 4b462b5768665236152dd3a0be5f2d02 385 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 45 75 6.1E-9 T 15-10-2018 IPR006530 YD repeat XDD1_0959 4b462b5768665236152dd3a0be5f2d02 385 Pfam PF05593 RHS Repeat 20 53 1.9E-5 T 15-10-2018 IPR031325 RHS repeat XDD1_0959 4b462b5768665236152dd3a0be5f2d02 385 Gene3D G3DSA:2.180.10.10 2 265 8.0E-35 T 15-10-2018 XDD1_0959 4b462b5768665236152dd3a0be5f2d02 385 Pfam PF14040 Deoxyribonuclease NucA/NucB 283 381 2.4E-11 T 15-10-2018 IPR029476 Deoxyribonuclease NucA/NucB XDD1_2073 a57aec43633cd1c38eec99585aeceb34 322 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 308 7.3E-88 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 XDD1_2073 a57aec43633cd1c38eec99585aeceb34 322 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 13 317 1.7E-131 T 15-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 XDD1_2073 a57aec43633cd1c38eec99585aeceb34 322 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 313 52.534 T 15-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 XDD1_2073 a57aec43633cd1c38eec99585aeceb34 322 PIRSF PIRSF026649 13 317 6.0E-92 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 XDD1_0021 93d36eaa03874999d6d83145da2beba0 866 TIGRFAM TIGR02687 TIGR02687: TIGR02687 family protein 6 856 0.0 T 15-10-2018 IPR014060 Conserved hypothetical protein CHP02687 XDD1_0021 93d36eaa03874999d6d83145da2beba0 866 Pfam PF08665 PglZ domain 476 651 6.0E-64 T 15-10-2018 IPR013973 PglZ domain XDD1_0085 d3f2319e6fe468a6f829751587a82d08 821 Gene3D G3DSA:3.40.605.10 16 220 2.3E-6 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 XDD1_0085 d3f2319e6fe468a6f829751587a82d08 821 Pfam PF05893 Acyl-CoA reductase (LuxC) 47 430 2.0E-109 T 15-10-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 XDD1_0085 d3f2319e6fe468a6f829751587a82d08 821 Pfam PF00501 AMP-binding enzyme 473 683 1.6E-9 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XDD1_0085 d3f2319e6fe468a6f829751587a82d08 821 SUPERFAMILY SSF53720 50 287 5.76E-15 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XDD1_0085 d3f2319e6fe468a6f829751587a82d08 821 Gene3D G3DSA:3.40.50.12780 445 722 1.6E-53 T 15-10-2018 XDD1_0085 d3f2319e6fe468a6f829751587a82d08 821 SUPERFAMILY SSF56801 455 743 2.75E-23 T 15-10-2018 XDD1_0134 6c15d2cf5f71f0aa647f9aea8b447a0a 269 Pfam PF00535 Glycosyl transferase family 2 8 128 9.8E-16 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XDD1_0134 6c15d2cf5f71f0aa647f9aea8b447a0a 269 SUPERFAMILY SSF53448 4 150 1.31E-26 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_0134 6c15d2cf5f71f0aa647f9aea8b447a0a 269 Gene3D G3DSA:3.90.550.10 2 230 6.6E-26 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XDD1_1597 50799dae1b27d1b088596a6e718ffb61 183 PIRSF PIRSF010252 1 180 5.0E-58 T 15-10-2018 IPR009809 Cell division protein ZapC XDD1_1597 50799dae1b27d1b088596a6e718ffb61 183 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 180 38.419 T 15-10-2018 IPR009809 Cell division protein ZapC XDD1_1597 50799dae1b27d1b088596a6e718ffb61 183 Pfam PF07126 Cell-division protein ZapC 3 170 7.1E-65 T 15-10-2018 IPR009809 Cell division protein ZapC XDD1_p0012 3fd231d68d59156c33ce8928f3cd098b 306 Pfam PF13988 Protein of unknown function (DUF4225) 76 271 2.0E-14 T 15-10-2018 IPR025320 Protein of unknown function DUF4225 XDD1_0131 a728621b0da840fe098cd120371cf2a1 415 Pfam PF04932 O-Antigen ligase 198 343 7.0E-17 T 15-10-2018 IPR007016 O-antigen ligase-related XDD1_2978 eee9642d4c057b65220ba4c2b5f9f5a9 200 SUPERFAMILY SSF101327 7 181 1.96E-41 T 15-10-2018 IPR036255 YgfB-like superfamily XDD1_2978 eee9642d4c057b65220ba4c2b5f9f5a9 200 Gene3D G3DSA:1.20.120.740 4 200 1.8E-47 T 15-10-2018 XDD1_2978 eee9642d4c057b65220ba4c2b5f9f5a9 200 Pfam PF03695 Uncharacterised protein family (UPF0149) 13 181 4.8E-31 T 15-10-2018 IPR011978 Uncharacterised protein family UPF0149 XDD1_2978 eee9642d4c057b65220ba4c2b5f9f5a9 200 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 198 30.786 T 15-10-2018 IPR011978 Uncharacterised protein family UPF0149 XDD1_1982 ff683a807324405fa81cd5d5e6662871 450 Gene3D G3DSA:3.90.640.10 335 378 1.8E-10 T 15-10-2018 XDD1_1982 ff683a807324405fa81cd5d5e6662871 450 Pfam PF00012 Hsp70 protein 129 260 1.2E-11 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XDD1_1982 ff683a807324405fa81cd5d5e6662871 450 Gene3D G3DSA:3.30.420.40 379 433 1.8E-10 T 15-10-2018 XDD1_1982 ff683a807324405fa81cd5d5e6662871 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 XDD1_1982 ff683a807324405fa81cd5d5e6662871 450 SUPERFAMILY SSF53067 207 446 5.66E-30 T 15-10-2018 XDD1_1982 ff683a807324405fa81cd5d5e6662871 450 SUPERFAMILY SSF53067 1 205 3.88E-26 T 15-10-2018 XDD1_3011 2ee23337ab939cde85cd657073c6aad4 178 Pfam PF05258 Protein of unknown function (DUF721) 26 98 9.1E-12 T 15-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 XDD1_2268 675dd4d626e4ad2a612b53c371eabd27 285 Gene3D G3DSA:1.20.1250.20 2 280 1.5E-28 T 15-10-2018 XDD1_2268 675dd4d626e4ad2a612b53c371eabd27 285 SUPERFAMILY SSF103473 8 279 2.49E-31 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_2268 675dd4d626e4ad2a612b53c371eabd27 285 Pfam PF07690 Major Facilitator Superfamily 13 269 4.1E-22 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0023 80652098e9af233ad26ca6cc488236af 372 Gene3D G3DSA:3.40.50.300 5 354 2.4E-22 T 15-10-2018 XDD1_0023 80652098e9af233ad26ca6cc488236af 372 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 27 322 1.5E-25 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XDD1_0023 80652098e9af233ad26ca6cc488236af 372 SUPERFAMILY SSF52540 6 340 1.94E-22 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_0023 80652098e9af233ad26ca6cc488236af 372 PIRSF PIRSF029347 162 356 3.7E-20 T 15-10-2018 IPR014555 RecF-like XDD1_0023 80652098e9af233ad26ca6cc488236af 372 PIRSF PIRSF029347 3 131 9.6E-9 T 15-10-2018 IPR014555 RecF-like XDD1_0871 c53f862d262a655e1811b2b831dc2b8c 509 Pfam PF07690 Major Facilitator Superfamily 18 366 2.6E-29 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0871 c53f862d262a655e1811b2b831dc2b8c 509 Gene3D G3DSA:1.20.1250.20 214 409 4.8E-16 T 15-10-2018 XDD1_0871 c53f862d262a655e1811b2b831dc2b8c 509 Gene3D G3DSA:1.20.1250.20 4 208 4.0E-13 T 15-10-2018 XDD1_0871 c53f862d262a655e1811b2b831dc2b8c 509 SUPERFAMILY SSF103473 1 405 6.67E-43 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_2224 a7838c779a3e9cf9401b1c9017078d7c 178 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 18.907 T 15-10-2018 IPR006008 Intracellular septation protein A GO:0016021 XDD1_2224 a7838c779a3e9cf9401b1c9017078d7c 178 Pfam PF04279 Intracellular septation protein A 1 175 2.3E-68 T 15-10-2018 IPR006008 Intracellular septation protein A GO:0016021 XDD1_2224 a7838c779a3e9cf9401b1c9017078d7c 178 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 9.7E-68 T 15-10-2018 IPR006008 Intracellular septation protein A GO:0016021 XDD1_3469 93d6b2005e041d72801b52591c356ef1 207 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 40 193 6.0E-9 T 15-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like XDD1_3469 93d6b2005e041d72801b52591c356ef1 207 Gene3D G3DSA:2.50.20.10 25 207 2.3E-24 T 15-10-2018 XDD1_3469 93d6b2005e041d72801b52591c356ef1 207 SUPERFAMILY SSF89392 27 192 4.32E-20 T 15-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX XDD1_0163 5f24199d5efd96f3430599b63bf2edf2 290 Gene3D G3DSA:3.40.50.720 1 286 2.1E-43 T 15-10-2018 XDD1_0163 5f24199d5efd96f3430599b63bf2edf2 290 SUPERFAMILY SSF51735 4 286 1.54E-51 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_0163 5f24199d5efd96f3430599b63bf2edf2 290 Pfam PF04321 RmlD substrate binding domain 4 164 3.3E-23 T 15-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 XDD1_2636 a13112c32b60853933ceedb641779515 91 Pfam PF08891 YfcL protein 4 86 1.2E-36 T 15-10-2018 IPR014987 Uncharacterised protein family YfcL XDD1_1619 eca2479939a935d5bc1df84392cdc228 403 SUPERFAMILY SSF103473 5 394 9.29E-13 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_1619 eca2479939a935d5bc1df84392cdc228 403 Gene3D G3DSA:1.20.1250.20 2 392 6.3E-9 T 15-10-2018 XDD1_3800 55870141c733d236a29020c5aff13516 205 Pfam PF03458 UPF0126 domain 5 78 3.1E-19 T 15-10-2018 IPR005115 Uncharacterised domain UPF0126 XDD1_3800 55870141c733d236a29020c5aff13516 205 Pfam PF03458 UPF0126 domain 91 163 8.4E-22 T 15-10-2018 IPR005115 Uncharacterised domain UPF0126 XDD1_1839 708d6b8b2c07252db8904e36f6b8fcee 146 Pfam PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH 67 142 1.1E-26 T 15-10-2018 IPR026834 LHH XDD1_0970 6d4627182fba0fc9949439cec8c930e0 118 Pfam PF13665 Domain of unknown function (DUF4150) 15 117 5.3E-32 T 15-10-2018 IPR025425 Domain of unknown function DUF4150 XDD1_2615 04867ab4ac83807e43aa7ee5a5ba7a9b 99 Gene3D G3DSA:3.30.420.470 1 97 1.3E-12 T 15-10-2018 XDD1_2615 04867ab4ac83807e43aa7ee5a5ba7a9b 99 Pfam PF13358 DDE superfamily endonuclease 5 85 2.6E-20 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2519 778ba83bd4e2077bb7662486ed09a64a 361 SUPERFAMILY SSF81345 23 356 3.4E-77 T 15-10-2018 IPR037294 ABC transporter, BtuC-like XDD1_2519 778ba83bd4e2077bb7662486ed09a64a 361 Gene3D G3DSA:1.10.3470.10 28 360 1.0E-95 T 15-10-2018 IPR037294 ABC transporter, BtuC-like XDD1_2519 778ba83bd4e2077bb7662486ed09a64a 361 Pfam PF01032 FecCD transport family 45 356 1.8E-83 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 XDD1_2533 3527b43ac063efb82177b31d1d1528af 234 Pfam PF01569 PAP2 superfamily 97 200 2.2E-9 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XDD1_2533 3527b43ac063efb82177b31d1d1528af 234 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 2 233 39.77 T 15-10-2018 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 XDD1_2533 3527b43ac063efb82177b31d1d1528af 234 SMART SM00014 92 210 3.0E-7 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XDD1_2533 3527b43ac063efb82177b31d1d1528af 234 SUPERFAMILY SSF48317 12 212 2.09E-19 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily XDD1_2533 3527b43ac063efb82177b31d1d1528af 234 Gene3D G3DSA:1.20.144.10 7 226 7.9E-7 T 15-10-2018 XDD1_3269 931dc8424eb5c21de487d418e0da3a5d 576 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 42.141 T 15-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 XDD1_3269 931dc8424eb5c21de487d418e0da3a5d 576 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 6 572 0.0 T 15-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 XDD1_3269 931dc8424eb5c21de487d418e0da3a5d 576 PIRSF PIRSF000719 1 574 3.3E-272 T 15-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 XDD1_3269 931dc8424eb5c21de487d418e0da3a5d 576 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 2.8E-242 T 15-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 XDD1_3612 9057b0f0e6c93e5e0ed03274ac15325e 229 Hamap MF_00801 Endonuclease V [nfi]. 3 222 33.576 T 15-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 XDD1_3612 9057b0f0e6c93e5e0ed03274ac15325e 229 Pfam PF04493 Endonuclease V 31 212 8.8E-72 T 15-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 XDD1_3612 9057b0f0e6c93e5e0ed03274ac15325e 229 Gene3D G3DSA:3.30.2170.10 1 219 1.0E-78 T 15-10-2018 XDD1_3929 9687bc5c402055e6e71558dddf3959e2 392 Pfam PF07690 Major Facilitator Superfamily 23 343 1.4E-36 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_3929 9687bc5c402055e6e71558dddf3959e2 392 Gene3D G3DSA:1.20.1250.20 18 387 6.4E-47 T 15-10-2018 XDD1_3929 9687bc5c402055e6e71558dddf3959e2 392 SUPERFAMILY SSF103473 18 390 3.01E-56 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_2364 552e36b36cc6fc5d2cc8646e101f037a 234 Pfam PF11153 Protein of unknown function (DUF2931) 16 232 2.4E-38 T 15-10-2018 IPR021326 Protein of unknown function DUF2931 XDD1_3370 14f5260207472cf0640b45dbf3bf51d0 292 Gene3D G3DSA:2.40.30.130 13 93 5.5E-5 T 15-10-2018 XDD1_3370 14f5260207472cf0640b45dbf3bf51d0 292 SUPERFAMILY SSF55186 125 272 2.09E-9 T 15-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 XDD1_1876 efc2efd018ec697eb656f08ee9510599 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 1.0E-94 T 15-10-2018 IPR014319 Phage shock protein, PspA XDD1_1876 efc2efd018ec697eb656f08ee9510599 223 Pfam PF04012 PspA/IM30 family 2 216 3.6E-49 T 15-10-2018 IPR007157 PspA/IM30 XDD1_0229 7321a2136bcb92e3202337bbae3d7018 344 Pfam PF02371 Transposase IS116/IS110/IS902 family 216 288 3.7E-22 T 15-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 XDD1_0229 7321a2136bcb92e3202337bbae3d7018 344 Pfam PF01548 Transposase 7 146 5.7E-22 T 15-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 XDD1_0127 63654dc164358b3132e503d312a5aa28 372 Gene3D G3DSA:3.40.50.2000 169 351 1.4E-74 T 15-10-2018 XDD1_0127 63654dc164358b3132e503d312a5aa28 372 SUPERFAMILY SSF53756 8 364 1.66E-79 T 15-10-2018 XDD1_0127 63654dc164358b3132e503d312a5aa28 372 Pfam PF00534 Glycosyl transferases group 1 183 344 3.7E-35 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 XDD1_0127 63654dc164358b3132e503d312a5aa28 372 Gene3D G3DSA:3.40.50.2000 29 364 1.4E-74 T 15-10-2018 XDD1_0127 63654dc164358b3132e503d312a5aa28 372 Pfam PF13439 Glycosyltransferase Family 4 17 173 1.4E-21 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XDD1_0070 42d8154d0e8b32c1d6e71b3cbd4eff3f 364 Gene3D G3DSA:1.20.1090.10 173 363 1.3E-63 T 15-10-2018 XDD1_0070 42d8154d0e8b32c1d6e71b3cbd4eff3f 364 PIRSF PIRSF001455 5 362 5.7E-111 T 15-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 XDD1_0070 42d8154d0e8b32c1d6e71b3cbd4eff3f 364 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 357 72.021 T 15-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 XDD1_0070 42d8154d0e8b32c1d6e71b3cbd4eff3f 364 Pfam PF01761 3-dehydroquinate synthase 67 326 7.7E-108 T 15-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 XDD1_0070 42d8154d0e8b32c1d6e71b3cbd4eff3f 364 Gene3D G3DSA:3.40.50.1970 1 172 2.7E-65 T 15-10-2018 XDD1_0070 42d8154d0e8b32c1d6e71b3cbd4eff3f 364 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 355 6.5E-122 T 15-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 XDD1_0070 42d8154d0e8b32c1d6e71b3cbd4eff3f 364 SUPERFAMILY SSF56796 4 357 2.36E-114 T 15-10-2018 XDD1_2385 16b13954f0560459a264b89685d7702d 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 2.0E-32 T 15-10-2018 IPR025730 Biofilm regulator BssS XDD1_2385 16b13954f0560459a264b89685d7702d 84 Pfam PF13991 BssS protein family 11 81 7.1E-37 T 15-10-2018 IPR025730 Biofilm regulator BssS XDD1_0541 b1245634b12e9484f0c5ced0453683d3 109 Pfam PF15781 ParE-like toxin of type II bacterial toxin-antitoxin system 12 98 1.7E-34 T 15-10-2018 IPR031552 Type II bacterial toxin-antitoxin system, ParE-like toxin XDD1_3251 f01073ef8a3fff8e3d6b4d341d8b4b0b 94 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 26 75 8.0E-13 T 15-10-2018 IPR010260 DNA-binding transcriptional activator AlpA XDD1_0648 d8605724010b75cacf88f5f07ad29008 113 Pfam PF13698 Domain of unknown function (DUF4156) 22 112 2.5E-31 T 15-10-2018 IPR025294 Protein of unknown function DUF4156 XDD1_0664 3eb9e6eafd6ed8f7670970e14d03590e 365 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 3.7E-72 T 15-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 XDD1_0664 3eb9e6eafd6ed8f7670970e14d03590e 365 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 347 1.7E-115 T 15-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 XDD1_2107 61b0a666c4af4223730f89c68c958abe 489 Gene3D G3DSA:1.20.1740.10 26 476 1.9E-52 T 15-10-2018 XDD1_2107 61b0a666c4af4223730f89c68c958abe 489 PIRSF PIRSF006060 22 486 3.7E-40 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XDD1_2107 61b0a666c4af4223730f89c68c958abe 489 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 29 488 1.8E-160 T 15-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 XDD1_2107 61b0a666c4af4223730f89c68c958abe 489 Pfam PF13520 Amino acid permease 31 433 5.5E-66 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XDD1_1815 af9bbc4a8a4b19804446398bda3234e0 287 Pfam PF03618 Kinase/pyrophosphorylase 19 277 1.3E-72 T 15-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 XDD1_1815 af9bbc4a8a4b19804446398bda3234e0 287 SUPERFAMILY SSF47454 187 244 5.49E-6 T 15-10-2018 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily GO:0003677|GO:0006355 XDD1_1815 af9bbc4a8a4b19804446398bda3234e0 287 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 16 286 70.861 T 15-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein XDD1_0113 c01cc726c03e8aa80d4756a6ef665dfa 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 2.9E-127 T 15-10-2018 IPR005229 Conserved hypothetical protein CHP00255 XDD1_0113 c01cc726c03e8aa80d4756a6ef665dfa 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 1.8E-43 T 15-10-2018 IPR013527 YicC-like, N-terminal XDD1_0113 c01cc726c03e8aa80d4756a6ef665dfa 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 1.3E-34 T 15-10-2018 IPR013551 Domain of unknown function DUF1732 XDD1_1050 03a2707c7944f564c86af845ef24d817 203 SUPERFAMILY SSF52499 14 199 6.02E-42 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 XDD1_1050 03a2707c7944f564c86af845ef24d817 203 Gene3D G3DSA:3.40.50.850 2 199 6.2E-43 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 XDD1_1050 03a2707c7944f564c86af845ef24d817 203 Pfam PF00857 Isochorismatase family 24 193 2.9E-35 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 XDD1_2433 1b6f6f48c34289c09ee41ff2d4c3ab1c 47 Pfam PF11119 Protein of unknown function (DUF2633) 3 46 1.8E-15 T 15-10-2018 IPR022576 Protein of unknown function DUF2633 XDD1_0865 279da87b5d38ed739194e17737daceb3 110 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 13 108 3.1E-39 T 15-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 XDD1_0865 279da87b5d38ed739194e17737daceb3 110 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 93 1.4E-18 T 15-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 XDD1_2308 9eba82887f2928f721ddfeae303dd84f 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 2.3E-16 T 15-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 XDD1_2308 9eba82887f2928f721ddfeae303dd84f 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 2.3E-16 T 15-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 XDD1_2308 9eba82887f2928f721ddfeae303dd84f 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 2.3E-16 T 15-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 XDD1_2308 9eba82887f2928f721ddfeae303dd84f 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 103 17.696 T 15-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 XDD1_2308 9eba82887f2928f721ddfeae303dd84f 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 17 103 6.2E-27 T 15-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 XDD1_2308 9eba82887f2928f721ddfeae303dd84f 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 5 103 1.9E-27 T 15-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 XDD1_1944 62b8e2d723ff7619c7ee56510bd534dc 339 Pfam PF04231 Endonuclease I 30 237 9.2E-58 T 15-10-2018 IPR007346 Endonuclease I GO:0004518 XDD1_1944 62b8e2d723ff7619c7ee56510bd534dc 339 SUPERFAMILY SSF54060 27 238 4.94E-86 T 15-10-2018 XDD1_1944 62b8e2d723ff7619c7ee56510bd534dc 339 SUPERFAMILY SSF57884 286 338 7.98E-8 T 15-10-2018 IPR035451 Ada-like domain superfamily XDD1_3843 79a369c28228d20a2a9697726c6ad87f 445 Pfam PF00860 Permease family 30 404 1.6E-45 T 15-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 XDD1_3843 79a369c28228d20a2a9697726c6ad87f 445 PIRSF PIRSF005353 5 444 6.1E-174 T 15-10-2018 IPR026033 Purine permease PbuG-like XDD1_0091 cdf0b9ed51684de579e6a36efc282c63 538 Pfam PF01384 Phosphate transporter family 71 527 3.4E-87 T 15-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 XDD1_1879 d80ec870c7e174409feac018cddb92ce 465 PIRSF PIRSF019381 1 465 3.0E-219 T 15-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein XDD1_1879 d80ec870c7e174409feac018cddb92ce 465 SUPERFAMILY SSF52540 17 95 6.53E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_1879 d80ec870c7e174409feac018cddb92ce 465 Pfam PF04317 YcjX-like family, DUF463 20 464 5.5E-188 T 15-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein XDD1_1997 5cf8adea1dc1e29f127e83d9729687d3 91 Pfam PF10762 Protein of unknown function (DUF2583) 1 88 2.7E-40 T 15-10-2018 IPR019698 Protein of unknown function DUF2583 XDD1_3424 bcf71bb1ee85a3862547d572213c2101 141 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 8 141 5.3E-37 T 15-10-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly XDD1_1765 9c189852cad65dbfadabbc4a8a49a899 99 Pfam PF13358 DDE superfamily endonuclease 15 92 5.0E-14 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_3194 185f0b91eba9f56aa71921358988d1a2 251 ProSitePatterns PS01218 TatC family signature. 160 179 - T 15-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site XDD1_3194 185f0b91eba9f56aa71921358988d1a2 251 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 15 232 7.6E-77 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XDD1_3194 185f0b91eba9f56aa71921358988d1a2 251 Pfam PF00902 Sec-independent protein translocase protein (TatC) 18 227 2.1E-65 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XDD1_3194 185f0b91eba9f56aa71921358988d1a2 251 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 245 16.222 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XDD1_3194 185f0b91eba9f56aa71921358988d1a2 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 109 135 9.1E-50 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XDD1_3194 185f0b91eba9f56aa71921358988d1a2 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 160 188 9.1E-50 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XDD1_3194 185f0b91eba9f56aa71921358988d1a2 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 14 41 9.1E-50 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XDD1_3194 185f0b91eba9f56aa71921358988d1a2 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 91 109 9.1E-50 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XDD1_2813 5091dcbf517991687b4a78f44d2d65e6 154 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 139 1.8E-31 T 15-10-2018 XDD1_2813 5091dcbf517991687b4a78f44d2d65e6 154 PIRSF PIRSF004923 1 150 3.3E-33 T 15-10-2018 IPR026268 Protein RseC XDD1_3509 8e45882536dba045594a8616a50a0b92 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 15-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 XDD1_3509 8e45882536dba045594a8616a50a0b92 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 9.3E-46 T 15-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 XDD1_3509 8e45882536dba045594a8616a50a0b92 130 SUPERFAMILY SSF54211 5 130 4.17E-49 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XDD1_3509 8e45882536dba045594a8616a50a0b92 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.61 T 15-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid XDD1_3509 8e45882536dba045594a8616a50a0b92 130 Gene3D G3DSA:3.30.230.10 1 130 1.8E-53 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XDD1_1068 2439e870e6eab72adf79f803f4c5b128 527 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 27 291 1.1E-116 T 15-10-2018 IPR022304 Integrating conjugative element, PFGI-1, ParB XDD1_1068 2439e870e6eab72adf79f803f4c5b128 527 SUPERFAMILY SSF110849 34 136 9.24E-10 T 15-10-2018 IPR036086 ParB/Sulfiredoxin superfamily XDD1_1755 9c3ae632dd25c8b7533abc8f5d7d194c 187 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 184 2.0E-67 T 15-10-2018 XDD1_1755 9c3ae632dd25c8b7533abc8f5d7d194c 187 Pfam PF14002 YniB-like protein 15 184 3.0E-65 T 15-10-2018 IPR025229 YniB-like protein XDD1_3206 46202c5b38cba7358a2c66d2ca3ac24b 322 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 201 1.7E-21 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 XDD1_3206 46202c5b38cba7358a2c66d2ca3ac24b 322 SUPERFAMILY SSF51735 1 312 2.2E-46 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_3206 46202c5b38cba7358a2c66d2ca3ac24b 322 Gene3D G3DSA:3.40.50.720 8 299 1.1E-114 T 15-10-2018 XDD1_3206 46202c5b38cba7358a2c66d2ca3ac24b 322 Gene3D G3DSA:3.90.25.10 172 309 1.1E-114 T 15-10-2018 XDD1_2273 d422bba262b6781c0bf00584641cb0cd 198 Gene3D G3DSA:2.30.110.20 3 157 1.0E-46 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_2273 d422bba262b6781c0bf00584641cb0cd 198 Pfam PF05638 Type VI secretion system effector, Hcp 6 143 1.2E-19 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_2273 d422bba262b6781c0bf00584641cb0cd 198 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 153 7.2E-52 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_2273 d422bba262b6781c0bf00584641cb0cd 198 SUPERFAMILY SSF141452 5 152 4.32E-30 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_2965 cae12634b80f301bd3f828b7d70b58cd 136 Gene3D G3DSA:3.30.420.470 5 134 2.7E-17 T 15-10-2018 XDD1_2965 cae12634b80f301bd3f828b7d70b58cd 136 Pfam PF13358 DDE superfamily endonuclease 3 122 3.2E-28 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2965 cae12634b80f301bd3f828b7d70b58cd 136 SUPERFAMILY SSF53098 43 121 2.07E-5 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0318 8fc6d0173a5def2e7bfe003a529cd496 89 Pfam PF07369 Protein of unknown function (DUF1488) 5 82 3.2E-21 T 15-10-2018 IPR009962 Protein of unknown function DUF1488 XDD1_0318 8fc6d0173a5def2e7bfe003a529cd496 89 SUPERFAMILY SSF160272 1 83 1.31E-27 T 15-10-2018 IPR036692 Shew3726-like superfamily XDD1_0318 8fc6d0173a5def2e7bfe003a529cd496 89 Gene3D G3DSA:3.30.160.140 1 83 4.4E-21 T 15-10-2018 IPR036692 Shew3726-like superfamily XDD1_0492 726c36468f0d79f85468793ea8a8ceea 390 Gene3D G3DSA:3.40.1710.10 44 174 8.0E-7 T 15-10-2018 XDD1_0492 726c36468f0d79f85468793ea8a8ceea 390 Pfam PF12698 ABC-2 family transporter protein 30 368 6.9E-33 T 15-10-2018 XDD1_1637 ad2da0d25fb6128e918f48715c4e8a34 106 SMART SM00992 4 103 5.3E-37 T 15-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 XDD1_1637 ad2da0d25fb6128e918f48715c4e8a34 106 SUPERFAMILY SSF141255 5 97 2.75E-30 T 15-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 XDD1_1637 ad2da0d25fb6128e918f48715c4e8a34 106 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 5 103 3.7E-32 T 15-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 XDD1_1637 ad2da0d25fb6128e918f48715c4e8a34 106 Gene3D G3DSA:2.30.30.390 2 106 1.7E-40 T 15-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 XDD1_1637 ad2da0d25fb6128e918f48715c4e8a34 106 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 6 97 1.2E-20 T 15-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 XDD1_1637 ad2da0d25fb6128e918f48715c4e8a34 106 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 2 106 37.193 T 15-10-2018 IPR022866 Heat shock protein HspQ XDD1_0916 5939d6b802a4a91a708e523631e4bbc7 405 SUPERFAMILY SSF103473 15 399 9.94E-53 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_0916 5939d6b802a4a91a708e523631e4bbc7 405 Pfam PF07690 Major Facilitator Superfamily 29 363 8.7E-33 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_0916 5939d6b802a4a91a708e523631e4bbc7 405 Gene3D G3DSA:1.20.1250.20 225 404 3.3E-18 T 15-10-2018 XDD1_0916 5939d6b802a4a91a708e523631e4bbc7 405 Gene3D G3DSA:1.20.1250.20 3 203 4.1E-21 T 15-10-2018 XDD1_0707 2c722e91471ec97eb61c8e8653edbadf 97 Gene3D G3DSA:1.20.5.780 4 92 1.8E-27 T 15-10-2018 XDD1_0707 2c722e91471ec97eb61c8e8653edbadf 97 Pfam PF08681 Protein of unknown function (DUF1778) 11 89 7.8E-24 T 15-10-2018 IPR014795 Vibrio phage ICP1, Orf50 XDD1_0707 2c722e91471ec97eb61c8e8653edbadf 97 SUPERFAMILY SSF47598 8 85 1.33E-19 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XDD1_0663 48a3b97647db004c2812d8488046e364 361 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 5 357 9.1E-139 T 15-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 XDD1_0663 48a3b97647db004c2812d8488046e364 361 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 356 4.7E-73 T 15-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 XDD1_1706 8d85694732b37fdd7fd30a01b2fef9c7 275 Gene3D G3DSA:3.40.50.1820 2 273 1.6E-38 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1706 8d85694732b37fdd7fd30a01b2fef9c7 275 Pfam PF12697 Alpha/beta hydrolase family 29 262 1.7E-9 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XDD1_1706 8d85694732b37fdd7fd30a01b2fef9c7 275 SUPERFAMILY SSF53474 2 272 8.41E-40 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold XDD1_1033 5cc7b22d849bee44a92842e40e1c2a0d 158 SUPERFAMILY SSF46689 19 132 5.82E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1033 5cc7b22d849bee44a92842e40e1c2a0d 158 Pfam PF13551 Winged helix-turn helix 30 90 2.5E-11 T 15-10-2018 XDD1_1102 ae019357c30e17ec112cbc65c4860f90 245 Gene3D G3DSA:3.40.50.150 24 230 1.3E-41 T 15-10-2018 XDD1_1102 ae019357c30e17ec112cbc65c4860f90 245 SUPERFAMILY SSF53335 7 218 8.51E-44 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_1102 ae019357c30e17ec112cbc65c4860f90 245 Pfam PF13649 Methyltransferase domain 43 138 1.4E-21 T 15-10-2018 XDD1_3438 82de56d62504b679c8d79cd66ec85ad1 223 Pfam PF05069 Phage virion morphogenesis family 11 79 8.3E-6 T 15-10-2018 IPR006522 Phage virion morphogensis protein XDD1_3315 63c0dc91bf95142f816382d3aba8b65b 127 SUPERFAMILY SSF158452 20 126 2.88E-38 T 15-10-2018 IPR036814 YqcC-like superfamily XDD1_3315 63c0dc91bf95142f816382d3aba8b65b 127 Pfam PF04287 tRNA pseudouridine synthase C 26 122 8.7E-36 T 15-10-2018 IPR023376 YqcC-like domain XDD1_3315 63c0dc91bf95142f816382d3aba8b65b 127 Gene3D G3DSA:1.20.1440.40 20 124 1.0E-34 T 15-10-2018 IPR036814 YqcC-like superfamily XDD1_3315 63c0dc91bf95142f816382d3aba8b65b 127 PIRSF PIRSF006257 20 127 3.3E-40 T 15-10-2018 IPR007384 Protein of unknown function UCP006257 XDD1_1240 7b27ddd5792e10858a223e2f48ae7bf1 344 Gene3D G3DSA:1.10.3470.10 21 340 3.2E-70 T 15-10-2018 IPR037294 ABC transporter, BtuC-like XDD1_1240 7b27ddd5792e10858a223e2f48ae7bf1 344 Pfam PF01032 FecCD transport family 37 337 1.0E-66 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 XDD1_1240 7b27ddd5792e10858a223e2f48ae7bf1 344 SUPERFAMILY SSF81345 24 337 1.18E-61 T 15-10-2018 IPR037294 ABC transporter, BtuC-like XDD1_0026 c51d1cb870b14b1e6ae25f1bf11ad410 200 Pfam PF08747 Domain of unknown function (DUF1788) 66 187 4.1E-32 T 15-10-2018 IPR014858 Protein of unknown function DUF1788 XDD1_0051 4ec6cc61ff5ea720089d023e977c6c31 296 Gene3D G3DSA:3.40.50.2300 127 262 4.2E-95 T 15-10-2018 XDD1_0051 4ec6cc61ff5ea720089d023e977c6c31 296 Pfam PF13407 Periplasmic binding protein domain 29 281 2.3E-56 T 15-10-2018 IPR025997 Periplasmic binding protein XDD1_0051 4ec6cc61ff5ea720089d023e977c6c31 296 SUPERFAMILY SSF53822 26 295 4.02E-85 T 15-10-2018 IPR028082 Periplasmic binding protein-like I XDD1_0051 4ec6cc61ff5ea720089d023e977c6c31 296 Gene3D G3DSA:3.40.50.2300 31 281 4.2E-95 T 15-10-2018 XDD1_1174 52afc923cf03e22585ddcf7673144c60 209 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 1.2E-61 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 XDD1_1174 52afc923cf03e22585ddcf7673144c60 209 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 207 3.4E-105 T 15-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 XDD1_1174 52afc923cf03e22585ddcf7673144c60 209 PIRSF PIRSF006102 3 209 1.6E-70 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 XDD1_1174 52afc923cf03e22585ddcf7673144c60 209 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.844 T 15-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 XDD1_3817 a8f57ebaec0c6ea9a06a267b689adead 239 Pfam PF11195 Protein of unknown function (DUF2829) 34 102 2.5E-10 T 15-10-2018 IPR021361 Protein of unknown function DUF2829 XDD1_2742 5447ca32f3de0d4bff613978ee830264 67 SUPERFAMILY SSF47598 17 63 7.56E-5 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XDD1_0249 ab97965db19ceba4ab2c90704c9cb501 344 Pfam PF02371 Transposase IS116/IS110/IS902 family 216 288 3.2E-22 T 15-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 XDD1_0249 ab97965db19ceba4ab2c90704c9cb501 344 Pfam PF01548 Transposase 7 146 5.7E-22 T 15-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 XDD1_1252 b79e9b4a8ee506b792d5f787a7542b29 263 Pfam PF03591 AzlC protein 39 179 1.1E-37 T 15-10-2018 IPR011606 Branched-chain amino acid transport, permease XDD1_2968 1a3a620170f3f2493a6c3e04cbcc3e52 505 SUPERFAMILY SSF51735 10 127 3.94E-6 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily XDD1_2968 1a3a620170f3f2493a6c3e04cbcc3e52 505 Gene3D G3DSA:3.40.50.720 7 196 2.6E-12 T 15-10-2018 XDD1_3742 419db945812dbb51e39f755cf5866fb5 116 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 59 109 4.8E-8 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 XDD1_2824 299703ab24724a54a4c809675a559a81 557 SUPERFAMILY SSF52540 1 518 3.48E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XDD1_2824 299703ab24724a54a4c809675a559a81 557 PIRSF PIRSF003128 1 557 3.8E-154 T 15-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 XDD1_2824 299703ab24724a54a4c809675a559a81 557 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 515 2.7E-20 T 15-10-2018 IPR003395 RecF/RecN/SMC, N-terminal XDD1_2824 299703ab24724a54a4c809675a559a81 557 Gene3D G3DSA:3.40.50.300 1 228 3.1E-43 T 15-10-2018 XDD1_2824 299703ab24724a54a4c809675a559a81 557 Gene3D G3DSA:3.40.50.300 239 557 1.3E-48 T 15-10-2018 XDD1_2824 299703ab24724a54a4c809675a559a81 557 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 556 4.1E-164 T 15-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 XDD1_1432 85cd510c1138946065997e5b7ba671aa 154 Pfam PF00583 Acetyltransferase (GNAT) family 16 143 2.9E-12 T 15-10-2018 IPR000182 GNAT domain XDD1_1432 85cd510c1138946065997e5b7ba671aa 154 Gene3D G3DSA:3.40.630.30 1 154 3.9E-35 T 15-10-2018 XDD1_1432 85cd510c1138946065997e5b7ba671aa 154 SUPERFAMILY SSF55729 1 150 1.15E-27 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_0017 205eb294ecb8b71910dbeba900043eaa 181 SUPERFAMILY SSF55729 45 161 4.08E-12 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_0017 205eb294ecb8b71910dbeba900043eaa 181 Pfam PF13673 Acetyltransferase (GNAT) domain 83 160 1.2E-6 T 15-10-2018 IPR000182 GNAT domain XDD1_0017 205eb294ecb8b71910dbeba900043eaa 181 Gene3D G3DSA:3.40.630.30 23 168 2.4E-25 T 15-10-2018 XDD1_0524 516f0065f2db4eefd79a26c1f9bf02bc 80 Gene3D G3DSA:2.10.260.10 1 78 6.5E-23 T 15-10-2018 XDD1_2927 fedc3f5d0b6987311f490c8d76e912c3 222 Pfam PF04519 Polymer-forming cytoskeletal 95 191 1.3E-18 T 15-10-2018 IPR007607 Bactofilin A/B XDD1_1708 21a4d264885d2ea772cd86f5f403f68a 259 Gene3D G3DSA:2.60.120.200 42 257 2.9E-47 T 15-10-2018 XDD1_3471 696612d78cf4d3c65f9e7dbabec02569 187 Pfam PF11659 Protein of unknown function (DUF3261) 48 186 1.6E-38 T 15-10-2018 IPR021675 Protein of unknown function DUF3261 XDD1_2656 baf57875e463795421e942dab6411fda 162 Pfam PF02674 Colicin V production protein 4 143 5.5E-39 T 15-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 XDD1_3942 709ccf412ae43ae7900f3e01e4ce1daa 540 Pfam PF00884 Sulfatase 202 444 3.8E-15 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 XDD1_3942 709ccf412ae43ae7900f3e01e4ce1daa 540 SUPERFAMILY SSF53649 250 449 4.42E-11 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 XDD1_3942 709ccf412ae43ae7900f3e01e4ce1daa 540 Gene3D G3DSA:3.40.720.10 197 467 4.3E-23 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 XDD1_2222 f86b217bfc9fa6017d5b97def0c009b2 252 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 242 19.871 T 15-10-2018 IPR009627 Uncharacterised protein family UPF0259 XDD1_2222 f86b217bfc9fa6017d5b97def0c009b2 252 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 240 1.9E-63 T 15-10-2018 IPR009627 Uncharacterised protein family UPF0259 XDD1_2779 d760c772abb890b600f2c636020bda09 142 Pfam PF14581 SseB protein C-terminal domain 15 127 5.3E-33 T 15-10-2018 IPR027945 SseB protein, C-terminal XDD1_3425 d361c686d766db514eec86792f0a9b9f 597 Gene3D G3DSA:2.60.40.3940 508 597 3.7E-13 T 15-10-2018 XDD1_3425 d361c686d766db514eec86792f0a9b9f 597 Pfam PF12571 Phage tail-collar fibre protein 2 158 3.0E-38 T 15-10-2018 IPR022225 Phage tail fibre protein XDD1_3425 d361c686d766db514eec86792f0a9b9f 597 Pfam PF12604 Tail fibre protein gp37 C terminal 428 506 1.6E-9 T 15-10-2018 IPR022246 Bacteriophage T7, Gp17, C-terminal XDD1_3425 d361c686d766db514eec86792f0a9b9f 597 Pfam PF12604 Tail fibre protein gp37 C terminal 315 380 1.4E-7 T 15-10-2018 IPR022246 Bacteriophage T7, Gp17, C-terminal XDD1_2376 94f20c91c9bc8d7eaadb7a7ebdb798f0 293 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 15-10-2018 IPR000540 Flagellar motor protein MotA, conserved site XDD1_2376 94f20c91c9bc8d7eaadb7a7ebdb798f0 293 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 4.1E-117 T 15-10-2018 IPR022522 Flagellar motor stator, MotA XDD1_2376 94f20c91c9bc8d7eaadb7a7ebdb798f0 293 Pfam PF01618 MotA/TolQ/ExbB proton channel family 134 239 2.5E-11 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel XDD1_3292 a005f7750399522202c8a9395102382d 196 Pfam PF01351 Ribonuclease HII 12 188 1.5E-41 T 15-10-2018 IPR024567 Ribonuclease HII/HIII domain XDD1_3292 a005f7750399522202c8a9395102382d 196 Hamap MF_00052_B Ribonuclease HII [rnhB]. 10 189 39.812 T 15-10-2018 IPR022898 Ribonuclease HII GO:0004523 XDD1_3292 a005f7750399522202c8a9395102382d 196 SUPERFAMILY SSF53098 4 194 1.27E-69 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3292 a005f7750399522202c8a9395102382d 196 Gene3D G3DSA:3.30.420.10 2 195 1.5E-77 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XDD1_1458 b1946bb478fd977a95a14ad73189a807 125 Pfam PF11190 Protein of unknown function (DUF2976) 37 123 6.4E-32 T 15-10-2018 IPR021356 Integrating conjugative element protein PFL4702 XDD1_1458 b1946bb478fd977a95a14ad73189a807 125 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 22 124 5.5E-36 T 15-10-2018 IPR021356 Integrating conjugative element protein PFL4702 XDD1_3728 8e7dc4f41ece409cff4cbee0ad4bc59d 112 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 19 69 2.1E-12 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 XDD1_3543 2ec8b772bb814d259cce1f6f94e51e81 138 Pfam PF07681 DoxX 18 96 7.9E-13 T 15-10-2018 IPR032808 DoxX family XDD1_1589 40e37dc18cc76d7fa404a04dd96a5d6c 210 SUPERFAMILY SSF56281 1 209 3.64E-59 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XDD1_1589 40e37dc18cc76d7fa404a04dd96a5d6c 210 SMART SM00849 12 192 3.4E-39 T 15-10-2018 IPR001279 Metallo-beta-lactamase XDD1_1589 40e37dc18cc76d7fa404a04dd96a5d6c 210 Gene3D G3DSA:3.60.15.10 1 210 3.2E-80 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XDD1_1589 40e37dc18cc76d7fa404a04dd96a5d6c 210 Pfam PF00753 Metallo-beta-lactamase superfamily 13 192 6.5E-29 T 15-10-2018 IPR001279 Metallo-beta-lactamase XDD1_0356 226982ddbc2f2f7c3cd4ebabf5666060 469 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 446 7.2E-245 T 15-10-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 XDD1_0356 226982ddbc2f2f7c3cd4ebabf5666060 469 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 454 37.639 T 15-10-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 XDD1_2551 0fc01eeef222c101e8778ecac0da8f18 197 SUPERFAMILY SSF81296 30 196 5.18E-63 T 15-10-2018 IPR014756 Immunoglobulin E-set XDD1_2551 0fc01eeef222c101e8778ecac0da8f18 197 Gene3D G3DSA:2.70.50.50 27 197 5.6E-73 T 15-10-2018 XDD1_2551 0fc01eeef222c101e8778ecac0da8f18 197 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 30 193 2.3E-38 T 15-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal XDD1_2095 5df0794e227e3cc3b6fe6cf86b216ff7 103 Pfam PF11080 Endoribonuclease GhoS 2 87 5.9E-6 T 15-10-2018 IPR022597 Endoribonuclease antitoxin GhoS GO:0004521 XDD1_1890 2f10e753e89af8ae27f762eee58164be 500 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 71 495 5.5E-192 T 15-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath XDD1_1890 2f10e753e89af8ae27f762eee58164be 500 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 24 495 3.3E-220 T 15-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath XDD1_1141 89fb454de598ac116dd9782c58f022c3 214 Pfam PF01810 LysE type translocator 21 210 3.5E-34 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 XDD1_1141 89fb454de598ac116dd9782c58f022c3 214 PIRSF PIRSF006324 1 214 1.8E-44 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 XDD1_0685 f0d9a8ce2e9fe5c03ffd39f8818731be 425 TIGRFAM TIGR02304 aden_form_hyp: putative adenylate-forming enzyme 2 423 3.8E-170 T 15-10-2018 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related XDD1_0685 f0d9a8ce2e9fe5c03ffd39f8818731be 425 Gene3D G3DSA:3.40.50.12780 8 325 6.2E-41 T 15-10-2018 XDD1_0954 bac46dcc3304f7918dcb330b40af250b 98 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 3 96 2.2E-42 T 15-10-2018 IPR014056 Addiction module killer protein, predicted XDD1_0954 bac46dcc3304f7918dcb330b40af250b 98 PIRSF PIRSF028744 1 97 1.0E-43 T 15-10-2018 IPR014056 Addiction module killer protein, predicted XDD1_0954 bac46dcc3304f7918dcb330b40af250b 98 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 93 7.9E-9 T 15-10-2018 IPR009241 Toxin HigB-like XDD1_1095 6e28f100ebc418177c38c0a18e7d67cd 474 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 5 458 2.8E-165 T 15-10-2018 IPR021207 Integrating conjugative element protein, PFL4705 XDD1_1095 6e28f100ebc418177c38c0a18e7d67cd 474 Pfam PF03743 Bacterial conjugation TrbI-like protein 336 446 1.1E-7 T 15-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI XDD1_1054 55a528b1e4b66e1cfd23547533222330 87 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 80 2.3E-38 T 15-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain XDD1_1054 55a528b1e4b66e1cfd23547533222330 87 Gene3D G3DSA:1.10.260.40 1 71 2.4E-34 T 15-10-2018 XDD1_1054 55a528b1e4b66e1cfd23547533222330 87 SUPERFAMILY SSF47413 2 71 1.61E-31 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_3808 295db17a52c7d2fb0208b44a1aa53e7a 404 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 2 397 24.752 T 15-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 XDD1_3808 295db17a52c7d2fb0208b44a1aa53e7a 404 Pfam PF03616 Sodium/glutamate symporter 2 366 1.8E-160 T 15-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 XDD1_3808 295db17a52c7d2fb0208b44a1aa53e7a 404 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 4.1E-188 T 15-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 XDD1_3619 316501711cefe89ceb8f9ac3130ee84e 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 3.6E-109 T 15-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 XDD1_3619 316501711cefe89ceb8f9ac3130ee84e 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 42.401 T 15-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 XDD1_3619 316501711cefe89ceb8f9ac3130ee84e 255 SUPERFAMILY SSF110399 1 237 7.59E-82 T 15-10-2018 XDD1_3619 316501711cefe89ceb8f9ac3130ee84e 255 Gene3D G3DSA:3.20.20.70 1 253 9.4E-109 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XDD1_3198 c832eb853d01a044cb998204e1299385 222 Pfam PF02036 SCP-2 sterol transfer family 32 130 5.7E-18 T 15-10-2018 IPR003033 SCP2 sterol-binding domain XDD1_3198 c832eb853d01a044cb998204e1299385 222 SUPERFAMILY SSF55718 29 131 5.49E-8 T 15-10-2018 IPR036527 SCP2 sterol-binding domain superfamily XDD1_1233 5433060991b9fe08cdc5434af386d0cd 223 SMART SM01144 28 220 1.4E-66 T 15-10-2018 IPR005636 DTW XDD1_1233 5433060991b9fe08cdc5434af386d0cd 223 Pfam PF03942 DTW domain 30 215 1.2E-40 T 15-10-2018 IPR005636 DTW XDD1_0059 bca7a56e198378eaa9e68736036f1975 103 Pfam PF04341 Protein of unknown function, DUF485 11 98 1.2E-33 T 15-10-2018 IPR007436 Protein of unknown function DUF485 XDD1_1703 d25fe6eb3b13fba6e5b59527f55346f3 161 Pfam PF10097 Predicted membrane protein (DUF2335) 62 111 1.3E-20 T 15-10-2018 IPR019284 Xylella phage Xfas53, Orf42 XDD1_2917 a0fbcc42cb9e4ecb62236ff1e75ea6ba 173 Pfam PF03245 Bacteriophage Rz lysis protein 43 166 5.1E-17 T 15-10-2018 IPR004929 Spanin, inner membrane subunit GO:0019076|GO:0019835 XDD1_1304 c8fae1edffa0b7daa7caf20d88c96b0b 96 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 89 9.5E-10 T 15-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 XDD1_1304 c8fae1edffa0b7daa7caf20d88c96b0b 96 SUPERFAMILY SSF47598 51 85 2.26E-5 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XDD1_3734 8c2d2d620a31d679f7b92fd0e32f3241 118 Pfam PF13665 Domain of unknown function (DUF4150) 15 117 2.5E-32 T 15-10-2018 IPR025425 Domain of unknown function DUF4150 XDD1_3711 8c2d2d620a31d679f7b92fd0e32f3241 118 Pfam PF13665 Domain of unknown function (DUF4150) 15 117 2.5E-32 T 15-10-2018 IPR025425 Domain of unknown function DUF4150 XDD1_2009 43d6e41c646f4d2a0707bb0fdd37f7fd 445 SUPERFAMILY SSF52799 294 443 2.88E-20 T 15-10-2018 IPR029021 Protein-tyrosine phosphatase-like XDD1_2009 43d6e41c646f4d2a0707bb0fdd37f7fd 445 Pfam PF00782 Dual specificity phosphatase, catalytic domain 325 440 1.4E-13 T 15-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 XDD1_2009 43d6e41c646f4d2a0707bb0fdd37f7fd 445 Gene3D G3DSA:3.90.190.10 306 444 1.7E-19 T 15-10-2018 IPR029021 Protein-tyrosine phosphatase-like XDD1_2009 43d6e41c646f4d2a0707bb0fdd37f7fd 445 SMART SM00195 306 441 5.2E-5 T 15-10-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 XDD1_2009 43d6e41c646f4d2a0707bb0fdd37f7fd 445 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 385 395 - T 15-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 XDD1_0566 36c387e08b4bdbce185b78e0f0a93b1d 535 Gene3D G3DSA:3.50.50.60 189 331 2.4E-14 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0566 36c387e08b4bdbce185b78e0f0a93b1d 535 Gene3D G3DSA:3.50.50.60 6 108 2.3E-13 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_0566 36c387e08b4bdbce185b78e0f0a93b1d 535 Pfam PF13450 NAD(P)-binding Rossmann-like domain 10 60 3.4E-11 T 15-10-2018 XDD1_0566 36c387e08b4bdbce185b78e0f0a93b1d 535 SUPERFAMILY SSF51905 5 534 2.85E-40 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XDD1_3058 0d70521bb5963a020a9e29dce969d778 187 Gene3D G3DSA:1.10.443.10 1 185 2.3E-41 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XDD1_3058 0d70521bb5963a020a9e29dce969d778 187 Pfam PF00589 Phage integrase family 5 174 4.5E-43 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XDD1_3058 0d70521bb5963a020a9e29dce969d778 187 SUPERFAMILY SSF56349 2 183 8.54E-45 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XDD1_1324 31cba87976aec4aa97ef317a48719f35 142 Pfam PF00892 EamA-like transporter family 4 140 2.1E-21 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XDD1_1324 31cba87976aec4aa97ef317a48719f35 142 SUPERFAMILY SSF103481 38 141 1.06E-15 T 15-10-2018 XDD1_3715 f851dc8295089e2b6c802ae95c6e6f73 87 Pfam PF06761 Intracellular multiplication and human macrophage-killing 3 66 8.4E-10 T 15-10-2018 IPR009612 ImcF-related XDD1_2714 8fcc8c4f72ef119b3f48e2a7a9b11ac4 508 Gene3D G3DSA:3.40.710.10 51 378 6.3E-70 T 15-10-2018 XDD1_2714 8fcc8c4f72ef119b3f48e2a7a9b11ac4 508 SUPERFAMILY SSF56601 50 372 1.43E-58 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XDD1_2714 8fcc8c4f72ef119b3f48e2a7a9b11ac4 508 Pfam PF00144 Beta-lactamase 55 361 1.3E-51 T 15-10-2018 IPR001466 Beta-lactamase-related XDD1_2572 e4c133310a04979ef664b0c1c82defae 832 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 19 832 9.3E-263 T 15-10-2018 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:1901515 XDD1_2572 e4c133310a04979ef664b0c1c82defae 832 Gene3D G3DSA:1.25.40.10 385 570 2.4E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_2572 e4c133310a04979ef664b0c1c82defae 832 SUPERFAMILY SSF48452 105 286 1.45E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_2572 e4c133310a04979ef664b0c1c82defae 832 Gene3D G3DSA:1.25.40.10 76 215 8.2E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XDD1_0740 eabe0cad24840f2a92b00b2b2b9b9aa0 91 Gene3D G3DSA:1.10.260.40 4 68 1.2E-18 T 15-10-2018 XDD1_0740 eabe0cad24840f2a92b00b2b2b9b9aa0 91 SMART SM00530 10 65 3.0E-15 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_0740 eabe0cad24840f2a92b00b2b2b9b9aa0 91 Pfam PF01381 Helix-turn-helix 11 65 7.6E-15 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_0740 eabe0cad24840f2a92b00b2b2b9b9aa0 91 SUPERFAMILY SSF47413 2 72 5.9E-21 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_3486 7f05797a4e05c8a238b838f173ba981a 99 Pfam PF13997 YqjK-like protein 16 88 5.6E-27 T 15-10-2018 IPR025612 YqjK-like protein XDD1_3365 0c9ac97c48444615d354c61875c3ffd3 152 Pfam PF10713 Protein of unknown function (DUF2509) 16 151 3.8E-43 T 15-10-2018 IPR019652 Protein of unknown function DUF2509 XDD1_3559 601794c0136ab19d6090719db7a5f6be 90 Pfam PF06196 Protein of unknown function (DUF997) 7 76 5.2E-28 T 15-10-2018 IPR010398 Protein of unknown function DUF997 XDD1_3559 601794c0136ab19d6090719db7a5f6be 90 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 76 3.0E-30 T 15-10-2018 IPR010398 Protein of unknown function DUF997 XDD1_0892 521472eaeb2527489b4f58fee5041c0b 219 Pfam PF13358 DDE superfamily endonuclease 49 182 1.4E-30 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0892 521472eaeb2527489b4f58fee5041c0b 219 SUPERFAMILY SSF53098 79 182 3.03E-8 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0892 521472eaeb2527489b4f58fee5041c0b 219 Gene3D G3DSA:3.30.420.470 16 210 1.0E-13 T 15-10-2018 XDD1_0797 e6a1cefcc5d7c1b901cfe67152313b56 223 Pfam PF09335 SNARE associated Golgi protein 48 173 2.1E-19 T 15-10-2018 IPR032816 SNARE associated Golgi protein XDD1_0674 f4ae93fc7ecafe2fc55b4c40d1b95329 207 Pfam PF01810 LysE type translocator 17 204 7.4E-30 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 XDD1_0674 f4ae93fc7ecafe2fc55b4c40d1b95329 207 PIRSF PIRSF006324 1 206 1.3E-48 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 XDD1_1862 999096910477325dc0d2142775be1ab8 79 Pfam PF06945 Protein of unknown function (DUF1289) 12 57 4.7E-17 T 15-10-2018 IPR010710 Protein of unknown function DUF1289 XDD1_2409 6c01ebf6d8c74d2ddd95ef08a03ded7c 140 Gene3D G3DSA:3.40.30.10 9 134 6.0E-39 T 15-10-2018 XDD1_2409 6c01ebf6d8c74d2ddd95ef08a03ded7c 140 SUPERFAMILY SSF52833 11 133 4.06E-29 T 15-10-2018 IPR036249 Thioredoxin-like superfamily XDD1_2409 6c01ebf6d8c74d2ddd95ef08a03ded7c 140 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 12 132 2.8E-33 T 15-10-2018 IPR006504 Transcriptional regulator Spx/MgsR XDD1_2409 6c01ebf6d8c74d2ddd95ef08a03ded7c 140 Pfam PF03960 ArsC family 13 132 8.7E-15 T 15-10-2018 IPR006660 Arsenate reductase-like XDD1_0175 6c699da9bd08ce89886f78dca8a85127 136 Pfam PF13957 Toxin YafO, type II toxin-antitoxin system 35 135 5.4E-33 T 15-10-2018 IPR020353 mRNA interferase toxin YafO XDD1_0175 6c699da9bd08ce89886f78dca8a85127 136 ProDom PD082093 YAFO SIMILAR YAFO-LIKE UNCHARACTERIZED PROTEIN ESCHERICHIA ECS0260 COLI 20 135 1.0E-7 T 15-10-2018 IPR020353 mRNA interferase toxin YafO XDD1_2851 d16f0c8e06bea6529964f0a44bba883d 165 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 136 2.9E-27 T 15-10-2018 IPR009678 Bacteriophage tail completion protein R XDD1_2684 a5e5a6104899ba0a34d0fb005175bdbb 100 Gene3D G3DSA:1.10.1200.10 2 94 3.1E-7 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_1379 dc9be3d128dbf7b3f170852dd69721ea 192 Pfam PF11198 Protein of unknown function (DUF2857) 9 180 5.3E-66 T 15-10-2018 IPR021364 Protein of unknown function DUF2857 XDD1_3487 877aaffa6296805145eea249f690b4f0 131 Pfam PF07681 DoxX 8 88 1.8E-15 T 15-10-2018 IPR032808 DoxX family XDD1_0011 69f1f671fc749ca3949c9d4d67db9eb2 208 Pfam PF01957 NfeD-like C-terminal, partner-binding 59 193 1.7E-5 T 15-10-2018 IPR002810 NfeD-like, C-terminal domain XDD1_0720 4cab444704e7a77f44f7f1436904a598 425 Pfam PF10117 McrBC 5-methylcytosine restriction system component 59 383 3.8E-97 T 15-10-2018 IPR019292 5-methylcytosine restriction system component XDD1_2676 6651c4307d69593e5de900414123ed24 234 SUPERFAMILY SSF55729 109 211 2.88E-6 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_0730 f013dc32ca8730b25c5be98d6814761e 425 Pfam PF07670 Nucleoside recognition 99 195 2.6E-8 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 XDD1_0730 f013dc32ca8730b25c5be98d6814761e 425 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 422 1.6E-73 T 15-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 XDD1_0730 f013dc32ca8730b25c5be98d6814761e 425 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 422 4.3E-149 T 15-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 XDD1_0730 f013dc32ca8730b25c5be98d6814761e 425 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 2.2E-23 T 15-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 XDD1_2765 fcba219fe97b310a009c9d5892f00b22 100 Pfam PF16485 Protealysin propeptide 31 71 7.6E-17 T 15-10-2018 IPR032475 Protealysin, N-terminal propeptide XDD1_3826 bf07228513da853b3be5bdbd95ddb891 265 SUPERFAMILY SSF46689 17 131 1.61E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_3826 bf07228513da853b3be5bdbd95ddb891 265 Pfam PF13551 Winged helix-turn helix 32 88 1.2E-8 T 15-10-2018 XDD1_3826 bf07228513da853b3be5bdbd95ddb891 265 Pfam PF13592 Winged helix-turn helix 100 155 2.2E-20 T 15-10-2018 IPR025959 Winged helix-turn helix domain XDD1_3826 bf07228513da853b3be5bdbd95ddb891 265 Pfam PF13358 DDE superfamily endonuclease 169 237 8.7E-8 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0143 2aaac870cda9fc577447c0c5ba09c34b 295 Pfam PF07395 Mig-14 33 292 1.3E-62 T 15-10-2018 IPR009977 Mig-14 XDD1_0143 2aaac870cda9fc577447c0c5ba09c34b 295 SUPERFAMILY SSF55729 132 285 8.48E-14 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_0213 a41089cd9ba81d1cab6ad9ba65d22e52 116 Pfam PF13358 DDE superfamily endonuclease 4 79 7.5E-19 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_0213 a41089cd9ba81d1cab6ad9ba65d22e52 116 SUPERFAMILY SSF53098 3 87 3.54E-5 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_0213 a41089cd9ba81d1cab6ad9ba65d22e52 116 Gene3D G3DSA:3.30.420.470 2 110 1.7E-10 T 15-10-2018 XDD1_1740 e47f8e0a0733efa5933c7da6c7dc9a4e 99 SUPERFAMILY SSF53098 3 91 2.58E-16 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily XDD1_3485 d39577c93962ef11a103a5c11e395699 138 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 21 132 1.1E-18 T 15-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III XDD1_2920 1c69b22efc0e0a13859a95738a420ca1 649 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 153 446 1.3E-107 T 15-10-2018 IPR008766 Replication gene A protein GO:0006260 XDD1_1699 f744a82d7b4d205915d8fbc68c2741c8 113 Pfam PF05360 yiaA/B two helix domain 1 29 8.5E-11 T 15-10-2018 IPR008024 YiaAB two helix XDD1_1699 f744a82d7b4d205915d8fbc68c2741c8 113 Pfam PF05360 yiaA/B two helix domain 40 92 6.5E-20 T 15-10-2018 IPR008024 YiaAB two helix XDD1_1072 68e9373453f26827dc8a7621d926d160 411 Pfam PF13730 Helix-turn-helix domain 53 114 1.8E-10 T 15-10-2018 XDD1_0641 1403f5affbf45028378b256459a67851 190 Gene3D G3DSA:1.10.357.10 2 179 1.9E-21 T 15-10-2018 XDD1_0641 1403f5affbf45028378b256459a67851 190 SUPERFAMILY SSF46689 2 60 7.18E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_0641 1403f5affbf45028378b256459a67851 190 SUPERFAMILY SSF48498 73 156 3.74E-5 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily XDD1_1121 ed26eabd2c1fd260fbd8b3c0447ca25f 115 Pfam PF15586 Immunity protein 8 4 113 7.4E-41 T 15-10-2018 IPR028964 Immunity protein 8 XDD1_3090 2b88ffc9d00b1a4967ef36136126251f 553 Pfam PF03354 Phage Terminase 71 531 6.1E-92 T 15-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type XDD1_3090 2b88ffc9d00b1a4967ef36136126251f 553 Gene3D G3DSA:3.40.50.300 27 251 5.9E-23 T 15-10-2018 XDD1_0262 584d7c6481e541168676749e215e8ab1 122 Pfam PF07226 Protein of unknown function (DUF1422) 2 114 3.0E-53 T 15-10-2018 IPR009867 Protein of unknown function DUF1422 XDD1_0262 584d7c6481e541168676749e215e8ab1 122 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 115 3.0E-39 T 15-10-2018 IPR009867 Protein of unknown function DUF1422 XDD1_2775 ea3a9168b2ad3c27fbccf1f146755559 68 Gene3D G3DSA:1.10.260.40 6 68 8.6E-8 T 15-10-2018 XDD1_2775 ea3a9168b2ad3c27fbccf1f146755559 68 SUPERFAMILY SSF47413 2 68 8.58E-17 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_2775 ea3a9168b2ad3c27fbccf1f146755559 68 SMART SM00530 6 62 0.0013 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_2775 ea3a9168b2ad3c27fbccf1f146755559 68 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 68 3.3E-23 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_2691 8f506e2ada7dc0fee38aab94441b4456 148 Pfam PF07506 RepB plasmid partitioning protein 9 135 5.5E-17 T 15-10-2018 IPR011111 RepB plasmid partition XDD1_0567 4b4123f2d73c4a013d23b531d083d85d 301 Pfam PF13557 Putative MetA-pathway of phenol degradation 67 296 1.3E-57 T 15-10-2018 IPR025737 MetA-pathway of phenol degradation, putative XDD1_2634 d64d5aaae250276b855f0e6913f6c4db 266 Pfam PF01925 Sulfite exporter TauE/SafE 14 249 5.5E-42 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 XDD1_0820 cd64fdab168618cefcb8a98944bcbc7d 134 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 129 1.2E-41 T 15-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system XDD1_0820 cd64fdab168618cefcb8a98944bcbc7d 134 Gene3D G3DSA:3.30.160.250 1 85 2.2E-17 T 15-10-2018 XDD1_0820 cd64fdab168618cefcb8a98944bcbc7d 134 SUPERFAMILY SSF143100 1 66 1.83E-16 T 15-10-2018 IPR035069 TTHA1013/TTHA0281-like XDD1_2738 46b7082c1aa2193e5ff86043bcee5309 80 SUPERFAMILY SSF101756 16 72 9.68E-5 T 15-10-2018 IPR036700 Bacterial OB-fold superfamily XDD1_3060 a5d59ab1daf6bdaaf3b4c12ee96993cf 67 Pfam PF04328 Selenoprotein, putative 5 67 4.4E-29 T 15-10-2018 IPR007423 Selenoprotein, putative XDD1_0856 1333c6390b2cabfbc8a5eeb3093e80ab 103 Gene3D G3DSA:2.60.120.620 42 102 1.8E-9 T 15-10-2018 XDD1_0856 1333c6390b2cabfbc8a5eeb3093e80ab 103 Pfam PF10014 2OG-Fe dioxygenase 57 97 1.2E-7 T 15-10-2018 IPR018724 2OG-Fe dioxygenase XDD1_1948 44454d3151307756442d142394c9b763 172 Pfam PF13358 DDE superfamily endonuclease 15 149 2.2E-33 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_1948 44454d3151307756442d142394c9b763 172 Gene3D G3DSA:3.30.420.470 8 166 1.3E-11 T 15-10-2018 XDD1_3880 10b4088a9065ba64ef7df40e2102e7eb 98 Pfam PF13358 DDE superfamily endonuclease 15 81 4.8E-10 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_2057 597601d729859a9c0c0229fc1273a77c 323 Gene3D G3DSA:3.40.50.150 99 305 3.8E-20 T 15-10-2018 XDD1_2057 597601d729859a9c0c0229fc1273a77c 323 SUPERFAMILY SSF53335 91 322 1.49E-32 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_2057 597601d729859a9c0c0229fc1273a77c 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 12 322 54.537 T 15-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 XDD1_2057 597601d729859a9c0c0229fc1273a77c 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 7 321 5.6E-151 T 15-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 XDD1_2057 597601d729859a9c0c0229fc1273a77c 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 3.2E-172 T 15-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like XDD1_2709 ed7e17075019132f20bff1b414d4343c 243 Pfam PF13302 Acetyltransferase (GNAT) domain 112 228 8.7E-7 T 15-10-2018 IPR000182 GNAT domain XDD1_2709 ed7e17075019132f20bff1b414d4343c 243 SUPERFAMILY SSF55729 113 235 1.59E-13 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_2709 ed7e17075019132f20bff1b414d4343c 243 Gene3D G3DSA:3.40.630.30 101 228 9.4E-19 T 15-10-2018 XDD1_3823 d51215ceb696ee6fa0812d5ddc22213e 67 Pfam PF13936 Helix-turn-helix domain 3 45 2.6E-16 T 15-10-2018 IPR025246 Transposase IS30-like HTH domain XDD1_3341 5fdc9a3a5f4f931fd3a2db19212ba3d4 505 Pfam PF07690 Major Facilitator Superfamily 29 413 1.9E-39 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XDD1_3341 5fdc9a3a5f4f931fd3a2db19212ba3d4 505 Gene3D G3DSA:1.20.1720.10 21 263 8.2E-39 T 15-10-2018 XDD1_3341 5fdc9a3a5f4f931fd3a2db19212ba3d4 505 Gene3D G3DSA:1.20.1250.20 265 503 9.4E-9 T 15-10-2018 XDD1_3341 5fdc9a3a5f4f931fd3a2db19212ba3d4 505 SUPERFAMILY SSF103473 14 500 6.93E-54 T 15-10-2018 IPR036259 MFS transporter superfamily XDD1_2187 3bf464098ff3eff0bfd0759ca3d81996 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 9.4E-61 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 XDD1_2187 3bf464098ff3eff0bfd0759ca3d81996 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.5E-88 T 15-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 XDD1_2187 3bf464098ff3eff0bfd0759ca3d81996 193 PIRSF PIRSF006102 1 193 2.9E-60 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 XDD1_2187 3bf464098ff3eff0bfd0759ca3d81996 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.162 T 15-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 XDD1_1764 0b7a322df22f293b4a32a720c23795f9 157 SUPERFAMILY SSF46689 19 132 5.73E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_1764 0b7a322df22f293b4a32a720c23795f9 157 Pfam PF13551 Winged helix-turn helix 30 90 2.4E-11 T 15-10-2018 XDD1_0749 08027b0c0b95bea88124710b970ab9cf 222 SUPERFAMILY SSF55729 93 197 1.72E-6 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_3764 598d4b9ba2d109a902496b40991b455d 492 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 66 489 1.1E-176 T 15-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath XDD1_3764 598d4b9ba2d109a902496b40991b455d 492 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 17 490 2.8E-210 T 15-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath XDD1_3200 231018ec8bfa49bd0fe78d0a51b00111 451 Pfam PF02646 RmuC family 136 432 3.1E-104 T 15-10-2018 IPR003798 DNA recombination RmuC XDD1_1713 dc4f8f5e0f89e11ca3d60dc5f97c9b8f 155 Pfam PF01810 LysE type translocator 2 153 1.9E-25 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 XDD1_3708 ed587da91cc4ed6542527502d6ef8035 125 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 65 109 7.4E-8 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 XDD1_0827 b0e9bf9b6fd12bf55661d233dc82b89a 437 SUPERFAMILY SSF161070 4 437 1.7E-121 T 15-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 XDD1_0827 b0e9bf9b6fd12bf55661d233dc82b89a 437 Pfam PF00209 Sodium:neurotransmitter symporter family 140 436 3.3E-34 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 XDD1_0827 b0e9bf9b6fd12bf55661d233dc82b89a 437 Pfam PF00209 Sodium:neurotransmitter symporter family 3 121 2.7E-19 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 XDD1_0827 b0e9bf9b6fd12bf55661d233dc82b89a 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 10 31 6.9E-12 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 XDD1_0827 b0e9bf9b6fd12bf55661d233dc82b89a 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 39 58 6.9E-12 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 XDD1_0827 b0e9bf9b6fd12bf55661d233dc82b89a 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 6.9E-12 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 XDD1_0827 b0e9bf9b6fd12bf55661d233dc82b89a 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 417 437 6.9E-12 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 XDD1_3860 a39445e1587b7b7d62c0ea3d1d4e9121 112 Pfam PF13358 DDE superfamily endonuclease 15 94 1.4E-13 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_1107 499e99788f3c89a25fb4d32b9f98179e 504 Pfam PF07916 TraG-like protein, N-terminal region 8 483 6.1E-100 T 15-10-2018 IPR012931 TraG-like, N-terminal XDD1_0531 116da5b9d90ebc95f57f0791cb595c72 474 Pfam PF03553 Na+/H+ antiporter family 168 472 4.6E-39 T 15-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 XDD1_0669 077f74ef097fb4901c980fae153bb5f6 174 Pfam PF03591 AzlC protein 5 95 7.6E-11 T 15-10-2018 IPR011606 Branched-chain amino acid transport, permease XDD1_3712 f321356b8cff16dcc09ce801157bb520 406 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 21 369 2.2E-93 T 15-10-2018 IPR018683 Domain of unknown function DUF2169 XDD1_0668 de70466bf786c2a2210efee16bbf247f 110 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 105 1.4E-6 T 15-10-2018 IPR008407 Branched-chain amino acid transport, AzlD XDD1_3055 1551f362b3b3cbb01dc594fdf70d6f2d 223 Pfam PF03783 Curli production assembly/transport component CsgG 44 220 2.2E-31 T 15-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 XDD1_3055 1551f362b3b3cbb01dc594fdf70d6f2d 223 SUPERFAMILY SSF52964 45 144 8.11E-9 T 15-10-2018 XDD1_2832 743f16fa8df18b429bf0e5c4f7839322 545 Gene3D G3DSA:2.40.50.230 257 342 2.6E-5 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XDD1_2832 743f16fa8df18b429bf0e5c4f7839322 545 SUPERFAMILY SSF69255 253 343 3.92E-15 T 15-10-2018 XDD1_2832 743f16fa8df18b429bf0e5c4f7839322 545 SUPERFAMILY SSF69349 334 492 3.37E-9 T 15-10-2018 XDD1_3483 4783213e3326dba503248166903e08a8 222 Pfam PF09335 SNARE associated Golgi protein 48 173 1.4E-19 T 15-10-2018 IPR032816 SNARE associated Golgi protein XDD1_1980 6906df9890aa8878c6d616124943e918 174 Pfam PF04982 HPP family 45 164 6.3E-39 T 15-10-2018 IPR007065 HPP XDD1_2035 7d094ecefde7edd2a531826dbc83e886 163 Pfam PF05638 Type VI secretion system effector, Hcp 9 137 1.0E-26 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp XDD1_2035 7d094ecefde7edd2a531826dbc83e886 163 SUPERFAMILY SSF141452 6 161 3.4E-30 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_2035 7d094ecefde7edd2a531826dbc83e886 163 Gene3D G3DSA:2.30.110.20 6 162 1.1E-34 T 15-10-2018 IPR036624 Hcp1-like superfamily XDD1_3287 91774cb912989c9daa5aab7f021d9da8 152 Pfam PF05526 Rhodococcus equi virulence-associated protein 45 148 8.0E-15 T 15-10-2018 IPR008810 Rhodococcus equi virulence-associated protein XDD1_3287 91774cb912989c9daa5aab7f021d9da8 152 Gene3D G3DSA:2.40.128.480 42 152 3.0E-27 T 15-10-2018 IPR038625 Rhodococcus equi virulence-associated superfamiliy XDD1_2125 0daa313f3b99496a31e3893d456749e4 157 SUPERFAMILY SSF46689 22 132 7.26E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XDD1_2125 0daa313f3b99496a31e3893d456749e4 157 Pfam PF13551 Winged helix-turn helix 30 90 2.4E-11 T 15-10-2018 XDD1_3573 266d1358ed5b5938955af1bce6df9910 100 Pfam PF01381 Helix-turn-helix 12 66 4.1E-16 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_3573 266d1358ed5b5938955af1bce6df9910 100 SMART SM00530 11 66 7.2E-16 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XDD1_3573 266d1358ed5b5938955af1bce6df9910 100 SUPERFAMILY SSF47413 4 73 1.55E-22 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_3573 266d1358ed5b5938955af1bce6df9910 100 Gene3D G3DSA:1.10.260.40 7 96 1.1E-18 T 15-10-2018 XDD1_2208 eaa512620acff45110a823334bb66127 83 Pfam PF10692 Protein of unknown function (DUF2498) 5 81 6.4E-40 T 15-10-2018 IPR019633 Protein of unknown function DUF2498 XDD1_2208 eaa512620acff45110a823334bb66127 83 Gene3D G3DSA:1.10.1900.30 9 77 1.7E-34 T 15-10-2018 IPR038191 YciN superfamily XDD1_2853 737214323f84afaf0a5acecc1b7d78cb 234 Pfam PF05944 Phage small terminase subunit 38 166 3.6E-42 T 15-10-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 XDD1_3441 737214323f84afaf0a5acecc1b7d78cb 234 Pfam PF05944 Phage small terminase subunit 38 166 3.6E-42 T 15-10-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 XDD1_3319 419141dda05efef19edb52f9fce2c131 304 Pfam PF03421 YopJ Serine/Threonine acetyltransferase 6 170 2.1E-19 T 15-10-2018 IPR005083 Serine/Threonine acetyltransferase, YopJ XDD1_2852 ea5ea6ec4b0bc043eefa0e98d15ab6c2 150 Pfam PF05926 Phage head completion protein (GPL) 14 149 6.9E-43 T 15-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 XDD1_1946 db8316575b7a316f54390ad1e6e4bb49 68 Pfam PF13358 DDE superfamily endonuclease 3 63 9.5E-12 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain XDD1_p0009 45e4f537c95dba2bdc55e96ed7f398c7 120 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 30 111 5.1E-27 T 15-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system XDD1_p0009 45e4f537c95dba2bdc55e96ed7f398c7 120 Gene3D G3DSA:3.10.450.530 12 114 1.1E-19 T 15-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily XDD1_0632 12e62f7e28138f764fda94ad31d85a53 161 SUPERFAMILY SSF46785 7 53 1.15E-5 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XDD1_3255 dc1c8991732fc84d62c0ae53e9af59cd 381 Pfam PF06889 Protein of unknown function (DUF1266) 176 332 6.6E-24 T 15-10-2018 IPR009677 Protein of unknown function DUF1266 XDD1_1104 251535f4abe38927e45d3f5f5f80d31c 322 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 26 320 1.8E-128 T 15-10-2018 IPR026331 Integrating conjugative element protein PFL_4710 XDD1_1104 251535f4abe38927e45d3f5f5f80d31c 322 Pfam PF06834 TraU protein 30 311 1.8E-71 T 15-10-2018 IPR009649 TraU XDD1_0645 e3a766aae6437fbf54bc460224d8754e 177 Pfam PF04186 FxsA cytoplasmic membrane protein 8 111 1.0E-30 T 15-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 XDD1_1128 6de22ce323c8a592bea89255593c2c58 97 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 6 78 6.6E-13 T 15-10-2018 IPR009610 CbtA toxin of type IV toxin-antitoxin system XDD1_1419 b8e2042a3403e6d0544c31f31f08a885 83 Pfam PF04226 Transglycosylase associated protein 33 80 4.7E-15 T 15-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 XDD1_0547 3a1cfb1c6ca137aaa4ad09d155e74c3e 421 Gene3D G3DSA:2.60.40.10 37 139 2.6E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold XDD1_0574 7e38c0faa05ae40b9c463136a5dc6c09 253 Pfam PF13835 Domain of unknown function (DUF4194) 57 220 1.0E-29 T 15-10-2018 IPR025449 Protein of unknown function DUF4194 XDD1_0872 ebdbab1701178f3efc4dad1e794645af 195 Pfam PF03923 Uncharacterized lipoprotein 32 191 6.1E-53 T 15-10-2018 IPR005619 Uncharacterised protein family, YajG XDD1_1444 8e195a32515e0e4497df14a4a36ae7ca 140 Pfam PF03788 LrgA family 26 116 1.0E-29 T 15-10-2018 IPR005538 LrgA/CidA family GO:0016021 XDD1_1444 8e195a32515e0e4497df14a4a36ae7ca 140 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 7 126 22.118 T 15-10-2018 IPR022957 Uncharacterised protein family UPF0299 XDD1_1094 fcdddc45acf9615222ca2db79ba41d93 276 Pfam PF11920 Protein of unknown function (DUF3438) 15 269 5.6E-107 T 15-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 XDD1_1094 fcdddc45acf9615222ca2db79ba41d93 276 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 18 260 1.6E-99 T 15-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 XDD1_0537 9344f6bf06353a95bb871d30c49d2e7c 162 Gene3D G3DSA:3.40.630.30 2 160 8.6E-49 T 15-10-2018 XDD1_0537 9344f6bf06353a95bb871d30c49d2e7c 162 Pfam PF00583 Acetyltransferase (GNAT) family 37 144 1.9E-8 T 15-10-2018 IPR000182 GNAT domain XDD1_0537 9344f6bf06353a95bb871d30c49d2e7c 162 SUPERFAMILY SSF55729 25 146 5.23E-15 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_1743 8c5626128dba4051f2f8bbf9aa189511 128 SUPERFAMILY SSF81296 30 127 1.33E-25 T 15-10-2018 IPR014756 Immunoglobulin E-set XDD1_1743 8c5626128dba4051f2f8bbf9aa189511 128 Pfam PF04234 CopC domain 31 127 1.3E-24 T 15-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 XDD1_1743 8c5626128dba4051f2f8bbf9aa189511 128 Gene3D G3DSA:2.60.40.1220 31 128 5.3E-27 T 15-10-2018 XDD1_1092 4e523ac6a87c338ed356977390c28a33 123 Pfam PF11990 Protein of unknown function (DUF3487) 2 114 1.0E-41 T 15-10-2018 IPR021877 Protein of unknown function DUF3487 XDD1_1092 4e523ac6a87c338ed356977390c28a33 123 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 4 113 3.9E-41 T 15-10-2018 IPR021877 Protein of unknown function DUF3487 XDD1_0504 6413e91663aedd5613788cafec19b743 155 PIRSF PIRSF000452 5 155 8.5E-50 T 15-10-2018 IPR024170 Aminoglycoside N6-acetyltransferase XDD1_0504 6413e91663aedd5613788cafec19b743 155 Pfam PF00583 Acetyltransferase (GNAT) family 43 141 4.2E-11 T 15-10-2018 IPR000182 GNAT domain XDD1_0504 6413e91663aedd5613788cafec19b743 155 SUPERFAMILY SSF55729 9 149 1.71E-23 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase XDD1_0504 6413e91663aedd5613788cafec19b743 155 Gene3D G3DSA:3.40.630.30 8 155 2.0E-33 T 15-10-2018 XDD1_0842 f83519c0b0d6afd33aa04dc9f28894cb 163 Pfam PF04608 Phosphatidylglycerophosphatase A 15 155 5.2E-51 T 15-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 XDD1_0842 f83519c0b0d6afd33aa04dc9f28894cb 163 SUPERFAMILY SSF101307 8 156 3.4E-47 T 15-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 XDD1_0842 f83519c0b0d6afd33aa04dc9f28894cb 163 PIRSF PIRSF006162 4 161 3.4E-53 T 15-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 XDD1_1077 396ee2a2225c07a67823f73e6a337356 185 Pfam PF12101 Protein of unknown function (DUF3577) 40 168 1.5E-57 T 15-10-2018 IPR021960 Protein of unknown function DUF3577 XDD1_3909 b7ce7670a264d2a4ec146f7ba4367fa0 125 Pfam PF10941 Protein of unknown function DUF2620 1 117 2.3E-47 T 15-10-2018 IPR021238 Protein of unknown function DUF2620 XDD1_2681 f71a89d1d2ae1eff147cbb2aa5eefebd 80 Gene3D G3DSA:1.10.1200.10 6 76 1.4E-9 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2681 f71a89d1d2ae1eff147cbb2aa5eefebd 80 SUPERFAMILY SSF47336 4 74 9.64E-7 T 15-10-2018 IPR036736 ACP-like superfamily XDD1_2964 e83185747416119258995314d5b6bf9c 111 Pfam PF01710 Transposase 29 108 4.6E-17 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 XDD1_0185 1cb908d72dc5dc136dbebfec21a635a6 216 Pfam PF07305 Protein of unknown function (DUF1454) 12 210 2.1E-72 T 15-10-2018 IPR009918 Protein of unknown function DUF1454 XDD1_0456 9fb3790301af7abc45876c20493451a1 88 Gene3D G3DSA:1.10.260.40 3 71 3.9E-33 T 15-10-2018 XDD1_0456 9fb3790301af7abc45876c20493451a1 88 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 7.8E-38 T 15-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain XDD1_0456 9fb3790301af7abc45876c20493451a1 88 SUPERFAMILY SSF47413 2 72 5.81E-31 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_3351 be7716fd9402031ba7bf70a47b34c003 95 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 16 71 4.9E-6 T 15-10-2018 IPR024455 Phage capsid XDD1_1897 616b254d4334231cfc3afe9fd3535b1c 133 Pfam PF13665 Domain of unknown function (DUF4150) 9 118 4.1E-35 T 15-10-2018 IPR025425 Domain of unknown function DUF4150 XDD1_0447 0f1d187a2dcb3885cad87ef40566ceb4 1261 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 927 1261 1.7E-65 T 15-10-2018 IPR007452 Translocation and assembly module TamB XDD1_0929 222e5d685bd016e265455d22253f6b2c 810 Pfam PF02687 FtsX-like permease family 716 800 1.1E-6 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 XDD1_2382 585a4335d8409eaa556781c30bc8bd49 172 Pfam PF10777 Inner membrane protein YlaC 1 153 7.1E-72 T 15-10-2018 IPR019713 Inner membrane protein YlaC XDD1_1864 aecf675f2abb0cf48d80093ef1b7f5dd 157 Pfam PF05433 Glycine zipper 2TM domain 65 104 1.0E-7 T 15-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 XDD1_1080 cd1ec89f9602ceeddd32bdcbc83eac1e 304 Pfam PF07751 Abi-like protein 40 227 1.9E-48 T 15-10-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like XDD1_1332 4519b95516589c6d0d4e76a53f97a840 69 Pfam PF10725 Protein of unknown function (DUF2517) 4 63 2.9E-37 T 15-10-2018 IPR019663 Uncharacterised protein YbfA XDD1_1939 cd7bd9cdaab8f36158e82c32d01ae15d 330 SUPERFAMILY SSF54001 221 328 5.59E-11 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily XDD1_1939 cd7bd9cdaab8f36158e82c32d01ae15d 330 Gene3D G3DSA:3.30.460.70 200 330 1.3E-32 T 15-10-2018 XDD1_3687 3c97a4f46eb5fe016aa46e555ac66922 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 300 1.6E-43 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 XDD1_3300 91e4b101f5aa884a5303e6845787d001 287 Pfam PF01148 Cytidylyltransferase family 4 278 3.4E-66 T 15-10-2018 XDD1_3300 91e4b101f5aa884a5303e6845787d001 287 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 15-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 XDD1_2867 926a253eefd110bc19d5cf843a26d9e1 65 Pfam PF06892 Phage regulatory protein CII (CP76) 5 56 7.2E-10 T 15-10-2018 IPR009679 Bacteriophage 186, CII XDD1_3406 ccde9cc7d0bbde3013938e055308ffba 91 Pfam PF04380 Membrane fusogenic activity 1 78 1.2E-29 T 15-10-2018 IPR007475 Membrane fusogenic activity XDD1_1506 a4f0933531d4eba15b70b23175117490 322 Pfam PF06834 TraU protein 30 311 8.7E-70 T 15-10-2018 IPR009649 TraU XDD1_1506 a4f0933531d4eba15b70b23175117490 322 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 26 320 1.6E-126 T 15-10-2018 IPR026331 Integrating conjugative element protein PFL_4710 XDD1_3933 b32cb48afaf33a4e191fa3ebf9c3b923 101 SUPERFAMILY SSF47413 18 79 7.16E-7 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XDD1_0178 1a0c7cbca7b949cac5d2f02074ae5c62 105 Pfam PF01710 Transposase 1 102 1.3E-21 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 XDD1_1382 c23243d800ff229595bc37cd7b3676d0 413 Pfam PF13730 Helix-turn-helix domain 54 114 2.7E-10 T 15-10-2018 XDD1_3657 f7a07cd091feeae316bc3e431305c0ee 72 Pfam PF04102 SlyX 7 72 1.9E-23 T 15-10-2018 IPR007236 SlyX XDD1_3657 f7a07cd091feeae316bc3e431305c0ee 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 16.625 T 15-10-2018 IPR007236 SlyX XDD1_1316 8bada0e8d601f6be70261446d572ca6a 246 SUPERFAMILY SSF53335 6 218 6.27E-43 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XDD1_1316 8bada0e8d601f6be70261446d572ca6a 246 Gene3D G3DSA:3.40.50.150 25 241 9.4E-40 T 15-10-2018 XDD1_1316 8bada0e8d601f6be70261446d572ca6a 246 Pfam PF13649 Methyltransferase domain 43 138 5.5E-21 T 15-10-2018 XDD1_1745 550f8f5585e5660a999a8b767c2f07bb 117 Pfam PF10709 Protein of unknown function (DUF2511) 24 110 2.7E-40 T 15-10-2018 IPR019648 Protein of unknown function DUF2511 XDD1_3443 bebfc2df7a746790c335cc6b0fd67594 276 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 7 255 1.6E-43 T 15-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 XDD1_1899 aaa9cd243c56f1171fe98c9165cee0ff 215 Pfam PF12059 Protein of unknown function (DUF3540) 35 215 4.2E-61 T 15-10-2018 IPR021927 Protein of unknown function DUF3540 XDD1_1178 06b5974dde04280a5b16535f60397630 74 Pfam PF04400 (Na+)-NQR maturation NqrM 22 62 2.8E-22 T 15-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM XDD1_0895 ee9114178817450338eec1e7882ac2d2 122 Pfam PF10757 Biofilm formation regulator YbaJ 1 115 2.3E-53 T 15-10-2018 IPR019693 Biofilm formation regulator YbaJ XDD1_2687 b396b582e4b9b6bda779248159f2f33f 237 Pfam PF03756 A-factor biosynthesis hotdog domain 84 214 8.8E-16 T 15-10-2018 IPR005509 A-factor biosynthesis hotdog domain XDD1_2252 0becfcb513c38ec3dd3a46a07872603f 144 Pfam PF07023 Protein of unknown function (DUF1315) 56 131 4.7E-25 T 15-10-2018 IPR009749 Protein of unknown function DUF1315 XDD1_3084 62fb6d22e5e8bec7536c993c151f55c3 182 Pfam PF04586 Caudovirus prohead serine protease 9 163 1.5E-47 T 15-10-2018 IPR006433 Prohead protease XDD1_3084 62fb6d22e5e8bec7536c993c151f55c3 182 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 18 160 1.2E-40 T 15-10-2018 IPR006433 Prohead protease XDD1_1137 8497e180c68d43d818ddf6824bd8b7e0 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 3.6E-40 T 15-10-2018 IPR007416 Protein of unknown function DUF469 XDD1_1953 36d4f0141ea96df35a46a8c5e7698e67 424 PRINTS PR01228 Eggshell protein signature 300 315 2.8E-8 T 15-10-2018 XDD1_1953 36d4f0141ea96df35a46a8c5e7698e67 424 PRINTS PR01228 Eggshell protein signature 371 389 2.8E-8 T 15-10-2018 XDD1_1953 36d4f0141ea96df35a46a8c5e7698e67 424 PRINTS PR01228 Eggshell protein signature 223 234 2.8E-8 T 15-10-2018 XDD1_1953 36d4f0141ea96df35a46a8c5e7698e67 424 PRINTS PR01228 Eggshell protein signature 325 335 2.8E-8 T 15-10-2018 XDD1_0660 f57c6d132e0a88e0031187b0209ae763 123 Pfam PF13610 DDE domain 2 79 9.1E-15 T 15-10-2018 IPR032874 DDE domain XDD1_3699 4b7d1ce51c6cb86f27151ff2b678c06d 192 Pfam PF14124 Domain of unknown function (DUF4291) 11 190 2.0E-72 T 15-10-2018 IPR025633 Protein of unknown function DUF4291 XDD1_3599 0d6ac2e0bc1edd18adcd6ab1ce0d33c7 419 Pfam PF01566 Natural resistance-associated macrophage protein 51 374 5.1E-16 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XDD1_1389 5c50227a43368a898940c6556bc735fb 226 Pfam PF14103 Domain of unknown function (DUF4276) 11 221 3.0E-50 T 15-10-2018 IPR025455 Protein of unknown function DUF4276 XDD1_0782 7a1fab07be546f351eb2702af8cab1da 158 PIRSF PIRSF003174 1 158 1.3E-67 T 15-10-2018 IPR010292 Uncharacterised protein family CreA XDD1_0782 7a1fab07be546f351eb2702af8cab1da 158 Pfam PF05981 CreA protein 25 156 2.0E-58 T 15-10-2018 IPR010292 Uncharacterised protein family CreA XDD1_2635 a7da162954f674e3e6be622c036e9f5d 183 Pfam PF04315 Elongation factor P hydroxylase 12 171 5.9E-81 T 15-10-2018 IPR007411 Elongation factor P hydroxylase XDD1_3724 1ed81e711d09b2b0e9ae9dbb6207958d 190 Pfam PF14124 Domain of unknown function (DUF4291) 9 188 2.6E-73 T 15-10-2018 IPR025633 Protein of unknown function DUF4291 XDD1_1831 ed96e7532b0d61670b063199f225838d 93 Pfam PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH 14 89 2.9E-27 T 15-10-2018 IPR026834 LHH XDD1_1911 fb17cfc3bf956d3db6fd2363c476d346 96 Pfam PF03891 Domain of unknown function (DUF333) 50 91 6.6E-14 T 15-10-2018 IPR005590 Protein of unknown function DUF333 XDD1_2641 79e991e225df83f51979d07690d6c41f 506 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 440 2.6E-146 T 15-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane XDD1_3841 28c4229d982cfaaf00423030dfb7217c 175 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 175 16.376 T 15-10-2018 IPR007336 Der GTPase activator GO:0005096 XDD1_3841 28c4229d982cfaaf00423030dfb7217c 175 Pfam PF04220 Der GTPase activator (YihI) 14 172 1.1E-53 T 15-10-2018 IPR007336 Der GTPase activator GO:0005096 XDD1_2907 19fe0d6b76e42f16d16e980e129e6d77 390 Pfam PF17482 Phage tail sheath C-terminal domain 276 377 4.4E-15 T 15-10-2018 IPR020287 Tail sheath protein, C-terminal domain XDD1_2907 19fe0d6b76e42f16d16e980e129e6d77 390 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 108 274 4.0E-33 T 15-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain XDD1_0761 788ab3870cd148de0b7e66a56b9f3dce 190 Pfam PF01184 GPR1/FUN34/yaaH family 3 183 9.4E-46 T 15-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 XDD1_1581 f4f48391d42b282492603a57d0aaa93b 274 Pfam PF02698 DUF218 domain 91 252 1.3E-24 T 15-10-2018 IPR003848 Domain of unknown function DUF218 XDD1_0367 c26db1762c307f63624b5f67545ccb17 65 Pfam PF13627 Prokaryotic lipoprotein-attachment site 11 29 2.7E-9 T 15-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site XDD1_2862 d0f57c9f92928440133fb33a8bfd85fe 770 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 160 475 4.4E-116 T 15-10-2018 IPR008766 Replication gene A protein GO:0006260 XDD1_0510 7042edb8bcc03544c1233d1776e74ded 436 Pfam PF13503 Domain of unknown function (DUF4123) 161 282 5.8E-14 T 15-10-2018 IPR025391 Domain of unknown function DUF4123 XDD1_1122 4be39637613ac649802b6407c9592b03 116 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 59 109 4.5E-8 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 XDD1_1744 281116bc91d385ef6ffa590a8db4a0f8 311 Pfam PF05425 Copper resistance protein D 206 304 3.9E-15 T 15-10-2018 IPR008457 Copper resistance protein D GO:0016021 XDD1_1083 21c73a5535305fd1bfdf13e73c454ded 252 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 57 246 1.0E-79 T 15-10-2018 IPR022293 Integrating conjugative element protein, PFL4693 XDD1_p0008 4827e0f4e463448b965dae9a73750da2 134 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 71 127 8.5E-18 T 15-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system XDD1_3913 29f6c4d5c11a8a1c7b6d670a526a06de 155 Pfam PF06836 Protein of unknown function (DUF1240) 63 154 2.1E-27 T 15-10-2018 IPR010665 Protein of unknown function DUF1240 XDD1_1097 e01764a7e8624d8728fa251474d4c2cf 132 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 12 129 4.5E-49 T 15-10-2018 IPR022262 Lipoprotein, putative XDD1_2167 cd4a8b3bdd3c42cd9dbb69b26c86b1b0 241 Pfam PF02666 Phosphatidylserine decarboxylase 29 231 1.0E-26 T 15-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 XDD1_2130 6bbc7207b01f2b25881ea9b9ee8767ae 300 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 2 203 3.8E-11 T 15-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 XDD1_1500 9aa264e61fb26e90dc91b384a0870547 110 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 18 75 7.3E-14 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 XDD1_1465 1226e8f1a232275d6a1b41c10c361325 236 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 21 232 3.2E-62 T 15-10-2018 IPR006214 Bax inhibitor 1-related XDD1_2327 05e9d03c4af0538b08cf65f0b1179aa0 191 Pfam PF13470 PIN domain 8 115 7.9E-11 T 15-10-2018 IPR002716 PIN domain XDD1_0901 b306df8fb2674a0bb588d19852865f08 54 Pfam PF10689 Protein of unknown function (DUF2496) 2 44 7.3E-24 T 15-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related XDD1_3679 628d1abb75678acc833df105469ec15e 121 Pfam PF06476 Protein of unknown function (DUF1090) 12 91 7.0E-11 T 15-10-2018 IPR009468 Protein of unknown function DUF1090 XDD1_0436 9042b44064b4610ada6ca811b67e6a6c 278 Pfam PF11236 Protein of unknown function (DUF3037) 7 125 6.3E-23 T 15-10-2018 IPR021398 Protein of unknown function DUF3037 XDD1_1923 57c5fa799e639079042af3ec140a6414 250 Gene3D G3DSA:3.30.450.20 2 182 2.2E-15 T 15-10-2018 XDD1_3135 f4b0a369fa36488e3d5a1a72de7993d6 248 Pfam PF01925 Sulfite exporter TauE/SafE 8 235 3.0E-24 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 XDD1_2524 118b2ba40c11bc4c7c54a0aee4f21143 360 Pfam PF03601 Conserved hypothetical protein 698 22 337 3.2E-104 T 15-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 XDD1_2524 118b2ba40c11bc4c7c54a0aee4f21143 360 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 19 356 6.9E-119 T 15-10-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 XDD1_0308 3fd7059a8859e55c1e4682bc264798c8 66 Pfam PF03889 Domain of unknown function 9 45 2.4E-22 T 15-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 XDD1_2741 686ea3e4225ea8a6dd841f9d7b334da5 94 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 26 75 8.0E-13 T 15-10-2018 IPR010260 DNA-binding transcriptional activator AlpA XDD1_1800 32eca03f4df67ed6f09b15243b4557c8 107 Pfam PF17074 Darcynin, domain of unknown function 13 101 2.5E-10 T 15-10-2018 IPR031409 Darcynin XDD1_0389 448ccee9396cb84de4b9993e2302a50e 117 Pfam PF05656 Protein of unknown function (DUF805) 11 113 2.4E-33 T 15-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 XDD1_1392 a7d14e0ee4066d737821beb605a6364b 177 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 58 160 5.4E-39 T 15-10-2018 IPR022260 Integrating conjugative element protein PilL, PFGI-1 XDD1_1505 83a03b1084539765ab742199fca48f01 479 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 47 469 3.3E-161 T 15-10-2018 IPR021204 Integrating conjugative element protein, PFL4711 XDD1_1069 39bc9f0f56cb7fa1dfdc55b63bc7a05d 192 Pfam PF11198 Protein of unknown function (DUF2857) 9 180 1.4E-65 T 15-10-2018 IPR021364 Protein of unknown function DUF2857