A9255_00185 SM00867 YceI-like domain A9255_00220 SM00382 ATPases associated with a variety of cellular activities A9255_00240 SM00357 Cold shock protein domain A9255_00320 SM01252 A9255_00320 A9255_00400 SM00778 Zinc-binding domain of primase-helicase A9255_00400 SM00885 D5 N terminal like A9255_00550 SM00986 Uracil DNA glycosylase superfamily A9255_00550 SM00987 UreE urease accessory protein, C-terminal domain A9255_00560 SM00487 DEAD-like helicases superfamily A9255_00560 SM00490 helicase superfamily c-terminal domain A9255_00600 SM00358 Double-stranded RNA binding motif A9255_00600 SM00535 Ribonuclease III family A9255_00755 SM00857 Resolvase, N terminal domain A9255_00815 SM00478 endonuclease III A9255_00815 SM01009 AlkA N-terminal domain A9255_00825 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9255_00835 SM00062 Bacterial periplasmic substrate-binding proteins A9255_00840 SM01211 A9255_00840 A9255_00845 SM00387 Histidine kinase-like ATPases A9255_00845 SM00388 His Kinase A (phosphoacceptor) domain A9255_00855 SM00382 ATPases associated with a variety of cellular activities A9255_00855 SM00448 cheY-homologous receiver domain A9255_00865 SM00938 Nitrogen regulatory protein P-II A9255_00945 SM01359 A9255_00945 A9255_00945 SM01360 A9255_00945 A9255_00970 SM00562 A9255_00970 A9255_00980 SM00028 Tetratricopeptide repeats A9255_01005 SM00564 beta-propeller repeat A9255_01065 SM00382 ATPases associated with a variety of cellular activities A9255_01105 SM00771 ZipA, C-terminal domain (FtsZ-binding) A9255_01110 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A9255_01110 SM00292 breast cancer carboxy-terminal domain A9255_01110 SM00532 Ligase N family A9255_01270 SM01007 Class II Aldolase and Adducin N-terminal domain A9255_01385 SM00463 Small MutS-related domain A9255_01400 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9255_01400 SM00866 A9255_01400 A9255_01460 SM00825 Beta-ketoacyl synthase A9255_01480 SM00448 cheY-homologous receiver domain A9255_01480 SM00862 Transcriptional regulatory protein, C terminal A9255_01485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9255_01485 SM00387 Histidine kinase-like ATPases A9255_01485 SM00388 His Kinase A (phosphoacceptor) domain A9255_01495 SM00342 helix_turn_helix, arabinose operon control protein A9255_01505 SM00859 Semialdehyde dehydrogenase, NAD binding domain A9255_01585 SM00825 Beta-ketoacyl synthase A9255_01610 SM00823 Phosphopantetheine attachment site A9255_01610 SM01294 A9255_01610 A9255_01615 SM00823 Phosphopantetheine attachment site A9255_01620 SM00822 A9255_01620 A9255_01620 SM00823 Phosphopantetheine attachment site A9255_01620 SM00825 Beta-ketoacyl synthase A9255_01620 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A9255_01630 SM00382 ATPases associated with a variety of cellular activities A9255_01645 SM00823 Phosphopantetheine attachment site A9255_01645 SM00824 Thioesterase A9255_01650 SM00823 Phosphopantetheine attachment site A9255_01660 SM00382 ATPases associated with a variety of cellular activities A9255_01710 SM00823 Phosphopantetheine attachment site A9255_01745 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9255_01780 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A9255_01785 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A9255_01785 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A9255_01835 SM00530 Helix-turn-helix XRE-family like proteins A9255_01905 SM00530 Helix-turn-helix XRE-family like proteins A9255_01945 SM00450 Rhodanese Homology Domain A9255_01985 SM00357 Cold shock protein domain A9255_02015 SM00073 Histidine Phosphotransfer domain A9255_02015 SM00260 Two component signalling adaptor domain A9255_02015 SM00387 Histidine kinase-like ATPases A9255_02015 SM01231 A9255_02015 A9255_02020 SM00260 Two component signalling adaptor domain A9255_02025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9255_02025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9255_02025 SM00319 Homologues of the ligand binding domain of Tar A9255_02030 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9255_02030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9255_02030 SM00319 Homologues of the ligand binding domain of Tar A9255_02035 SM00138 Methyltransferase, chemotaxis proteins A9255_02040 SM00448 cheY-homologous receiver domain A9255_02045 SM00448 cheY-homologous receiver domain A9255_02060 SM00857 Resolvase, N terminal domain A9255_02105 SM00858 A9255_02105 A9255_02150 SM00047 Lysozyme subfamily 2 A9255_02175 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A9255_02295 SM00382 ATPases associated with a variety of cellular activities A9255_02495 SM00507 HNH nucleases A9255_02620 SM00829 Enoylreductase A9255_02645 SM00421 helix_turn_helix, Lux Regulon A9255_02645 SM00448 cheY-homologous receiver domain A9255_02650 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A9255_02650 SM00465 GIY-YIG type nucleases (URI domain) A9255_02720 SM00530 Helix-turn-helix XRE-family like proteins A9255_02730 SM01252 A9255_02730 A9255_02790 SM00644 A9255_02790 A9255_02795 SM00342 helix_turn_helix, arabinose operon control protein A9255_02810 SM00357 Cold shock protein domain A9255_02820 SM01133 A9255_02820 A9255_02860 SM00116 Domain in cystathionine beta-synthase and other proteins. A9255_02860 SM00924 MgtE intracellular N domain A9255_02990 SM00530 Helix-turn-helix XRE-family like proteins A9255_03035 SM00507 HNH nucleases A9255_03095 SM01252 A9255_03095 A9255_03365 SM01130 A9255_03365 A9255_03410 SM00421 helix_turn_helix, Lux Regulon A9255_03410 SM00448 cheY-homologous receiver domain A9255_03415 SM00919 Malic enzyme, NAD binding domain A9255_03415 SM01274 A9255_03415 A9255_03445 SM00116 Domain in cystathionine beta-synthase and other proteins. A9255_03445 SM01240 A9255_03445 A9255_03545 SM00387 Histidine kinase-like ATPases A9255_03570 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9255_03675 SM00823 Phosphopantetheine attachment site A9255_03680 SM00823 Phosphopantetheine attachment site A9255_03715 SM00729 Elongator protein 3, MiaB family, Radical SAM A9255_03730 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A9255_03730 SM00091 PAS domain A9255_03730 SM00382 ATPases associated with a variety of cellular activities A9255_03745 SM00363 S4 RNA-binding domain A9255_03830 SM00823 Phosphopantetheine attachment site A9255_03895 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9255_03895 SM00895 A9255_03895 A9255_03945 SM00823 Phosphopantetheine attachment site A9255_03970 SM00855 Phosphoglycerate mutase family A9255_04105 SM00869 Autotransporter beta-domain A9255_04110 SM00869 Autotransporter beta-domain A9255_04115 SM01400 A9255_04115 A9255_04135 SM00937 A9255_04135 A9255_04225 SM00195 Dual specificity phosphatase, catalytic domain A9255_04315 SM00823 Phosphopantetheine attachment site A9255_04330 SM00829 Enoylreductase A9255_04375 SM00836 DALR anticodon binding domain A9255_04375 SM01016 Arginyl tRNA synthetase N terminal dom A9255_04425 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A9255_04430 SM00382 ATPases associated with a variety of cellular activities A9255_04440 SM00382 ATPases associated with a variety of cellular activities A9255_04495 SM00487 DEAD-like helicases superfamily A9255_04495 SM00491 A9255_04495 A9255_04515 SM00341 Helicase and RNase D C-terminal A9255_04515 SM00474 3'-5' exonuclease A9255_04615 SM00382 ATPases associated with a variety of cellular activities A9255_04615 SM00487 DEAD-like helicases superfamily A9255_04615 SM00490 helicase superfamily c-terminal domain A9255_04615 SM00847 Helicase associated domain (HA2) Add an annotation A9255_04855 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A9255_04855 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A9255_04875 SM00824 Thioesterase A9255_04885 SM00822 A9255_04885 A9255_04885 SM00823 Phosphopantetheine attachment site A9255_04885 SM00824 Thioesterase A9255_04885 SM00825 Beta-ketoacyl synthase A9255_04885 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A9255_04890 SM00823 Phosphopantetheine attachment site A9255_04895 SM00382 ATPases associated with a variety of cellular activities A9255_04900 SM00382 ATPases associated with a variety of cellular activities A9255_04915 SM00342 helix_turn_helix, arabinose operon control protein A9255_04955 SM00100 Cyclic nucleotide-monophosphate binding domain A9255_04955 SM00419 helix_turn_helix, cAMP Regulatory protein A9255_05060 SM00530 Helix-turn-helix XRE-family like proteins A9255_05080 SM00487 DEAD-like helicases superfamily A9255_05080 SM00490 helicase superfamily c-terminal domain A9255_05085 SM00778 Zinc-binding domain of primase-helicase A9255_05140 SM00507 HNH nucleases A9255_05220 SM00232 JAB/MPN domain A9255_05280 SM00869 Autotransporter beta-domain A9255_05320 SM00347 helix_turn_helix multiple antibiotic resistance protein A9255_05355 SM01022 A9255_05355 A9255_05375 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9255_05580 SM00900 A9255_05580 A9255_05590 SM00478 endonuclease III A9255_05590 SM00525 A9255_05590 A9255_05605 SM00357 Cold shock protein domain A9255_05605 SM00955 A9255_05605 A9255_05620 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A9255_05625 SM00028 Tetratricopeptide repeats A9255_05660 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A9255_05660 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A9255_05660 SM00493 A9255_05660 A9255_05675 SM00822 A9255_05675 A9255_05680 SM00363 S4 RNA-binding domain A9255_05690 SM00481 DNA polymerase alpha chain like domain A9255_05785 SM00155 Phospholipase D. Active site motifs. A9255_05795 SM00382 ATPases associated with a variety of cellular activities A9255_05800 SM00382 ATPases associated with a variety of cellular activities A9255_05840 SM00528 Domain in histone-like proteins of HNS family A9255_05850 SM00984 UDP binding domain A9255_05860 SM00448 cheY-homologous receiver domain A9255_05890 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A9255_05890 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A9255_05890 SM00493 A9255_05890 A9255_05905 SM00060 Fibronectin type 3 domain A9255_05915 SM00232 JAB/MPN domain A9255_05980 SM01252 A9255_05980 A9255_06075 SM01252 A9255_06075 A9255_06145 SM00507 HNH nucleases A9255_06205 SM00530 Helix-turn-helix XRE-family like proteins A9255_06240 SM00479 A9255_06240 A9255_06305 SM00870 A9255_06305 A9255_06365 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A9255_06375 SM01005 Alanine racemase, C-terminal domain A9255_06470 SM00382 ATPases associated with a variety of cellular activities A9255_06470 SM01086 C-terminal, D2-small domain, of ClpB protein A9255_06475 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9255_06595 SM00382 ATPases associated with a variety of cellular activities A9255_06595 SM01086 C-terminal, D2-small domain, of ClpB protein A9255_06605 SM00091 PAS domain A9255_06605 SM00382 ATPases associated with a variety of cellular activities A9255_06635 SM00382 ATPases associated with a variety of cellular activities A9255_06655 SM00382 ATPases associated with a variety of cellular activities A9255_06660 SM00382 ATPases associated with a variety of cellular activities A9255_06680 SM00363 S4 RNA-binding domain A9255_06700 SM00347 helix_turn_helix multiple antibiotic resistance protein A9255_06715 SM00479 A9255_06715 A9255_06730 SM00354 helix_turn _helix lactose operon repressor A9255_06780 SM00257 Lysin motif A9255_06835 SM00382 ATPases associated with a variety of cellular activities A9255_06840 SM00342 helix_turn_helix, arabinose operon control protein A9255_06890 SM00382 ATPases associated with a variety of cellular activities A9255_06900 SM00411 bacterial (prokaryotic) histone like domain A9255_06905 SM00873 B3/4 domain A9255_06905 SM00874 tRNA synthetase B5 domain A9255_06905 SM00896 Ferredoxin-fold anticodon binding domain A9255_06930 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A9255_06960 SM00382 ATPases associated with a variety of cellular activities A9255_07000 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A9255_07000 SM00245 tail specific protease A9255_07005 SM00945 ProQ/FINO family A9255_07010 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A9255_07115 SM00387 Histidine kinase-like ATPases A9255_07120 SM00421 helix_turn_helix, Lux Regulon A9255_07120 SM00448 cheY-homologous receiver domain A9255_07345 SM01252 A9255_07345 A9255_07415 SM00778 Zinc-binding domain of primase-helicase A9255_07420 SM00487 DEAD-like helicases superfamily A9255_07420 SM00490 helicase superfamily c-terminal domain A9255_07520 SM01329 A9255_07520 A9255_07550 SM00448 cheY-homologous receiver domain A9255_07550 SM00862 Transcriptional regulatory protein, C terminal A9255_07555 SM00387 Histidine kinase-like ATPases A9255_07565 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. A9255_07585 SM00382 ATPases associated with a variety of cellular activities A9255_07600 SM00487 DEAD-like helicases superfamily A9255_07600 SM00490 helicase superfamily c-terminal domain A9255_07600 SM00982 A9255_07600 A9255_07600 SM01058 CarD-like/TRCF domain A9255_07660 SM00825 Beta-ketoacyl synthase A9255_07670 SM00822 A9255_07670 A9255_07675 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A9255_07705 SM00363 S4 RNA-binding domain A9255_07710 SM00316 Ribosomal protein S1-like RNA-binding domain A9255_07950 SM00382 ATPases associated with a variety of cellular activities A9255_07965 SM00530 Helix-turn-helix XRE-family like proteins A9255_07970 SM00530 Helix-turn-helix XRE-family like proteins A9255_08065 SM00479 A9255_08065 A9255_08085 SM00382 ATPases associated with a variety of cellular activities A9255_08115 SM00518 AP endonuclease family 2 A9255_08135 SM00841 Elongation factor P, C-terminal A9255_08135 SM01185 A9255_08135 A9255_08155 SM00014 Acid phosphatase homologues A9255_08175 SM00363 S4 RNA-binding domain A9255_08180 SM00487 DEAD-like helicases superfamily A9255_08180 SM00490 helicase superfamily c-terminal domain A9255_08185 SM01321 A9255_08185 A9255_08235 SM00495 Chitin-binding domain type 3 A9255_08280 SM01040 BRO family, N-terminal domain A9255_08340 SM00644 A9255_08340 A9255_08365 SM00434 DNA Topoisomerase IV A9255_08370 SM00387 Histidine kinase-like ATPases A9255_08370 SM00388 His Kinase A (phosphoacceptor) domain A9255_08370 SM00448 cheY-homologous receiver domain A9255_08375 SM00421 helix_turn_helix, Lux Regulon A9255_08375 SM00448 cheY-homologous receiver domain A9255_08380 SM00387 Histidine kinase-like ATPases A9255_08410 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A9255_08450 SM01321 A9255_08450 A9255_08465 SM00267 diguanylate cyclase A9255_08560 SM00778 Zinc-binding domain of primase-helicase A9255_08560 SM00885 D5 N terminal like A9255_08615 SM00992 Hemimethylated DNA-binding protein YccV like A9255_08620 SM00881 CoA binding domain A9255_08690 SM00382 ATPases associated with a variety of cellular activities A9255_08695 SM00981 A9255_08695 A9255_08740 SM00849 Metallo-beta-lactamase superfamily A9255_08810 SM00382 ATPases associated with a variety of cellular activities A9255_08815 SM00849 Metallo-beta-lactamase superfamily A9255_08820 SM00411 bacterial (prokaryotic) histone like domain A9255_08825 SM00316 Ribosomal protein S1-like RNA-binding domain A9255_08855 SM00870 A9255_08855 A9255_08890 SM00382 ATPases associated with a variety of cellular activities A9255_08900 SM00843 A9255_08900 A9255_08905 SM00344 helix_turn_helix ASNC type A9255_08915 SM00382 ATPases associated with a variety of cellular activities A9255_08920 SM00382 ATPases associated with a variety of cellular activities A9255_08930 SM00316 Ribosomal protein S1-like RNA-binding domain A9255_08935 SM00382 ATPases associated with a variety of cellular activities A9255_08935 SM01086 C-terminal, D2-small domain, of ClpB protein A9255_08945 SM00357 Cold shock protein domain A9255_08950 SM00382 ATPases associated with a variety of cellular activities A9255_08970 SM00382 ATPases associated with a variety of cellular activities A9255_08975 SM00062 Bacterial periplasmic substrate-binding proteins A9255_08975 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A9255_09010 SM00014 Acid phosphatase homologues A9255_09020 SM00936 Penicillin-binding protein 5, C-terminal domain A9255_09085 SM01350 A9255_09085 A9255_09090 SM01091 Transporter associated domain A9255_09140 SM00919 Malic enzyme, NAD binding domain A9255_09140 SM01274 A9255_09140 A9255_09165 SM00852 Probable molybdopterin binding domain A9255_09175 SM00382 ATPases associated with a variety of cellular activities A9255_09245 SM00487 DEAD-like helicases superfamily A9255_09245 SM00488 A9255_09245 A9255_09245 SM00491 A9255_09245 A9255_09250 SM00450 Rhodanese Homology Domain A9255_09275 SM00487 DEAD-like helicases superfamily A9255_09275 SM00490 helicase superfamily c-terminal domain A9255_09290 SM00382 ATPases associated with a variety of cellular activities A9255_09330 SM00729 Elongator protein 3, MiaB family, Radical SAM A9255_09340 SM00487 DEAD-like helicases superfamily A9255_09340 SM00490 helicase superfamily c-terminal domain A9255_09360 SM00729 Elongator protein 3, MiaB family, Radical SAM A9255_09360 SM00876 Biotin and Thiamin Synthesis associated domain A9255_09410 SM00912 haemagglutination activity domain A9255_09440 SM00382 ATPases associated with a variety of cellular activities A9255_09465 SM00382 ATPases associated with a variety of cellular activities A9255_09475 SM00855 Phosphoglycerate mutase family A9255_09565 SM00881 CoA binding domain A9255_09580 SM00861 Transketolase, pyrimidine binding domain A9255_09615 SM00342 helix_turn_helix, arabinose operon control protein A9255_09655 SM00387 Histidine kinase-like ATPases A9255_09655 SM00388 His Kinase A (phosphoacceptor) domain A9255_09660 SM00448 cheY-homologous receiver domain A9255_09660 SM00862 Transcriptional regulatory protein, C terminal A9255_09665 SM00642 Alpha-amylase domain A9255_09730 SM00382 ATPases associated with a variety of cellular activities A9255_09740 SM00382 ATPases associated with a variety of cellular activities A9255_09765 SM00342 helix_turn_helix, arabinose operon control protein A9255_09810 SM01081 Putative carbohydrate binding domain A9255_09880 SM00729 Elongator protein 3, MiaB family, Radical SAM A9255_09895 SM00116 Domain in cystathionine beta-synthase and other proteins. A9255_09895 SM01091 Transporter associated domain A9255_09905 SM00062 Bacterial periplasmic substrate-binding proteins A9255_09920 SM00382 ATPases associated with a variety of cellular activities A9255_09970 SM00936 Penicillin-binding protein 5, C-terminal domain A9255_10005 SM00729 Elongator protein 3, MiaB family, Radical SAM A9255_10015 SM00357 Cold shock protein domain A9255_10035 SM00347 helix_turn_helix multiple antibiotic resistance protein A9255_10050 SM00830 Chorismate mutase type II A9255_10065 SM00382 ATPases associated with a variety of cellular activities A9255_10095 SM00967 RNA 2'-O ribose methyltransferase substrate binding A9255_10100 SM01144 A9255_10100 A9255_10105 SM00881 CoA binding domain A9255_10110 SM00155 Phospholipase D. Active site motifs. A9255_10140 SM00382 ATPases associated with a variety of cellular activities A9255_10140 SM01086 C-terminal, D2-small domain, of ClpB protein A9255_10150 SM00363 S4 RNA-binding domain A9255_10165 SM00830 Chorismate mutase type II A9255_10170 SM00830 Chorismate mutase type II A9255_10205 SM00382 ATPases associated with a variety of cellular activities A9255_10205 SM00962 SRP54-type protein, GTPase domain A9255_10205 SM00963 SRP54-type protein, helical bundle domain A9255_10215 SM01091 Transporter associated domain A9255_10265 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A9255_10270 SM00382 ATPases associated with a variety of cellular activities A9255_10285 SM00563 Phosphate acyltransferases A9255_10300 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A9255_10400 SM00900 A9255_10400 A9255_10450 SM00849 Metallo-beta-lactamase superfamily A9255_10485 SM00732 Likely ribonuclease with RNase H fold. A9255_10515 SM00729 Elongator protein 3, MiaB family, Radical SAM A9255_10545 SM00478 endonuclease III A9255_10545 SM00525 A9255_10545 A9255_10575 SM00778 Zinc-binding domain of primase-helicase A9255_10720 SM00869 Autotransporter beta-domain A9255_10745 SM00347 helix_turn_helix multiple antibiotic resistance protein A9255_10825 SM00823 Phosphopantetheine attachment site A9255_10830 SM00823 Phosphopantetheine attachment site A9255_10835 SM00823 Phosphopantetheine attachment site A9255_10870 SM00342 helix_turn_helix, arabinose operon control protein A9255_10870 SM00871 Bacterial transcription activator, effector binding domain A9255_10885 SM00937 A9255_10885 A9255_10970 SM01011 Aminopeptidase P, N-terminal domain A9255_11050 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9255_11050 SM00895 A9255_11050 A9255_11060 SM00644 A9255_11060 A9255_11070 SM00382 ATPases associated with a variety of cellular activities A9255_11100 SM00382 ATPases associated with a variety of cellular activities A9255_11105 SM00957 SecA DEAD-like domain A9255_11105 SM00958 SecA preprotein cross-linking domain A9255_11125 SM00864 Tubulin/FtsZ family, GTPase domain A9255_11125 SM00865 Tubulin/FtsZ family, C-terminal domain A9255_11130 SM00842 Cell division protein FtsA A9255_11200 SM00354 helix_turn _helix lactose operon repressor A9255_11225 SM00917 LeuA allosteric (dimerisation) domain A9255_11230 SM01329 A9255_11230 A9255_11240 SM00927 DNA mismatch repair enzyme MutH A9255_11270 SM00116 Domain in cystathionine beta-synthase and other proteins. A9255_11340 SM00731 SprT homologues. A9255_11360 SM00387 Histidine kinase-like ATPases A9255_11365 SM00493 A9255_11365 A9255_11375 SM00382 ATPases associated with a variety of cellular activities A9255_11435 SM00938 Nitrogen regulatory protein P-II A9255_11440 SM00382 ATPases associated with a variety of cellular activities A9255_11445 SM00382 ATPases associated with a variety of cellular activities A9255_11450 SM00344 helix_turn_helix ASNC type A9255_11470 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A9255_11480 SM00411 bacterial (prokaryotic) histone like domain A9255_11485 SM00382 ATPases associated with a variety of cellular activities A9255_11485 SM00464 Found in ATP-dependent protease La (LON) A9255_11490 SM00382 ATPases associated with a variety of cellular activities A9255_11490 SM00994 ClpX C4-type zinc finger A9255_11490 SM01086 C-terminal, D2-small domain, of ClpB protein A9255_11555 SM00636 A9255_11555 A9255_11575 SM00981 A9255_11575 A9255_11590 SM00861 Transketolase, pyrimidine binding domain A9255_11605 SM01321 A9255_11605 A9255_11610 SM00823 Phosphopantetheine attachment site A9255_11680 SM01323 A9255_11680 A9255_11715 SM00091 PAS domain A9255_11715 SM00387 Histidine kinase-like ATPases A9255_11715 SM00388 His Kinase A (phosphoacceptor) domain A9255_11720 SM00448 cheY-homologous receiver domain A9255_11720 SM00862 Transcriptional regulatory protein, C terminal A9255_11850 SM00382 ATPases associated with a variety of cellular activities A9255_11855 SM00530 Helix-turn-helix XRE-family like proteins A9255_11865 SM00382 ATPases associated with a variety of cellular activities A9255_11885 SM00855 Phosphoglycerate mutase family A9255_11890 SM00342 helix_turn_helix, arabinose operon control protein A9255_11890 SM00871 Bacterial transcription activator, effector binding domain A9255_11900 SM00448 cheY-homologous receiver domain A9255_11900 SM00862 Transcriptional regulatory protein, C terminal A9255_11920 SM00357 Cold shock protein domain A9255_11935 SM00852 Probable molybdopterin binding domain A9255_11950 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A9255_11950 SM00450 Rhodanese Homology Domain A9255_12015 SM00271 DnaJ molecular chaperone homology domain A9255_12045 SM00904 Riboflavin kinase A9255_12090 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A9255_12095 SM00851 MGS-like domain A9255_12095 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A9255_12105 SM00530 Helix-turn-helix XRE-family like proteins A9255_12145 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain A9255_12150 SM01133 A9255_12150 A9255_12170 SM00749 bacterial OsmY and nodulation domain A9255_12235 SM00530 Helix-turn-helix XRE-family like proteins A9255_12250 SM00841 Elongation factor P, C-terminal A9255_12250 SM01185 A9255_12250 A9255_12270 SM00883 Chaperonin 10 Kd subunit A9255_12370 SM00710 Parallel beta-helix repeats A9255_12385 SM00530 Helix-turn-helix XRE-family like proteins A9255_12425 SM00487 DEAD-like helicases superfamily A9255_12430 SM00855 Phosphoglycerate mutase family A9255_12645 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A9255_12695 SM00778 Zinc-binding domain of primase-helicase A9255_12780 SM00869 Autotransporter beta-domain A9255_12790 SM00824 Thioesterase A9255_12795 SM00923 MbtH-like protein A9255_12825 SM00822 A9255_12825 A9255_12925 SM00047 Lysozyme subfamily 2 A9255_12955 SM00354 helix_turn _helix lactose operon repressor A9255_12960 SM00354 helix_turn _helix lactose operon repressor A9255_13030 SM00530 Helix-turn-helix XRE-family like proteins A9255_13075 SM00823 Phosphopantetheine attachment site A9255_13115 SM00347 helix_turn_helix multiple antibiotic resistance protein A9255_13160 SM00342 helix_turn_helix, arabinose operon control protein A9255_13170 SM00327 von Willebrand factor (vWF) type A domain A9255_13175 SM00382 ATPases associated with a variety of cellular activities A9255_13235 SM00849 Metallo-beta-lactamase superfamily A9255_13250 SM00014 Acid phosphatase homologues A9255_13275 SM00382 ATPases associated with a variety of cellular activities A9255_13375 SM00062 Bacterial periplasmic substrate-binding proteins A9255_13390 SM00382 ATPases associated with a variety of cellular activities A9255_13395 SM00062 Bacterial periplasmic substrate-binding proteins A9255_13430 SM01329 A9255_13430 A9255_13480 SM00244 prohibitin homologues A9255_13485 SM00382 ATPases associated with a variety of cellular activities A9255_13495 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9255_13595 SM00257 Lysin motif A9255_13600 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A9255_13605 SM00448 cheY-homologous receiver domain A9255_13605 SM00850 LytTr DNA-binding domain A9255_13615 SM00487 DEAD-like helicases superfamily A9255_13615 SM00490 helicase superfamily c-terminal domain A9255_13620 SM00028 Tetratricopeptide repeats A9255_13625 SM00316 Ribosomal protein S1-like RNA-binding domain A9255_13625 SM00322 K homology RNA-binding domain A9255_13630 SM01387 A9255_13630 A9255_13650 SM00316 Ribosomal protein S1-like RNA-binding domain A9255_13685 SM00382 ATPases associated with a variety of cellular activities A9255_13695 SM01103 A9255_13695 A9255_13790 SM01091 Transporter associated domain A9255_13835 SM00967 RNA 2'-O ribose methyltransferase substrate binding A9255_13840 SM00316 Ribosomal protein S1-like RNA-binding domain A9255_13840 SM00357 Cold shock protein domain A9255_13840 SM00955 A9255_13840 A9255_13850 SM00788 Adenylosuccinate synthetase A9255_13855 SM00244 prohibitin homologues A9255_13860 SM00244 prohibitin homologues A9255_13880 SM00853 MutL C terminal dimerisation domain A9255_13880 SM01340 A9255_13880 A9255_13885 SM00646 A9255_13885 A9255_13980 SM00479 A9255_13980 A9255_14045 SM00354 helix_turn _helix lactose operon repressor A9255_14065 SM00341 Helicase and RNase D C-terminal A9255_14065 SM00487 DEAD-like helicases superfamily A9255_14065 SM00490 helicase superfamily c-terminal domain A9255_14065 SM00956 A9255_14065 A9255_14120 SM01219 A9255_14120 A9255_14215 SM00984 UDP binding domain A9255_14235 SM00357 Cold shock protein domain A9255_14235 SM00382 ATPases associated with a variety of cellular activities A9255_14235 SM00959 Rho termination factor, N-terminal domain A9255_14245 SM00487 DEAD-like helicases superfamily A9255_14245 SM00490 helicase superfamily c-terminal domain A9255_14275 SM00342 helix_turn_helix, arabinose operon control protein A9255_14315 SM00382 ATPases associated with a variety of cellular activities A9255_14415 SM00422 helix_turn_helix, mercury resistance A9255_14425 SM00662 RNA polymerases D A9255_14430 SM00363 S4 RNA-binding domain A9255_14430 SM01390 A9255_14430 A9255_14495 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A9255_14500 SM01374 A9255_14500 A9255_14520 SM00322 K homology RNA-binding domain A9255_14535 SM01382 A9255_14535 A9255_14535 SM01383 A9255_14535 A9255_14555 SM01403 A9255_14555 A9255_14685 SM00859 Semialdehyde dehydrogenase, NAD binding domain A9255_14740 SM00487 DEAD-like helicases superfamily A9255_14740 SM00490 helicase superfamily c-terminal domain A9255_14745 SM00354 helix_turn _helix lactose operon repressor A9255_14760 SM00382 ATPases associated with a variety of cellular activities A9255_14760 SM01086 C-terminal, D2-small domain, of ClpB protein A9255_14835 SM00563 Phosphate acyltransferases A9255_14845 SM00448 cheY-homologous receiver domain A9255_14845 SM00862 Transcriptional regulatory protein, C terminal A9255_14850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9255_14850 SM00387 Histidine kinase-like ATPases A9255_14850 SM00388 His Kinase A (phosphoacceptor) domain A9255_14910 SM00971 Serine acetyltransferase, N-terminal A9255_14925 SM00450 Rhodanese Homology Domain A9255_14940 SM00829 Enoylreductase A9255_15010 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A9255_15010 SM01232 A9255_15010 A9255_15195 SM00382 ATPases associated with a variety of cellular activities A9255_15195 SM00760 Bacterial dnaA protein helix-turn-helix domain A9255_15200 SM00480 DNA polymerase III beta subunit A9255_15210 SM00387 Histidine kinase-like ATPases A9255_15210 SM00433 TopoisomeraseII A9255_15220 SM00859 Semialdehyde dehydrogenase, NAD binding domain A9255_15290 SM00479 A9255_15290 A9255_15295 SM00487 DEAD-like helicases superfamily A9255_15320 SM00382 ATPases associated with a variety of cellular activities A9255_15365 SM01228 A9255_15365 A9255_15375 SM00344 helix_turn_helix ASNC type A9255_15385 SM00327 von Willebrand factor (vWF) type A domain A9255_15390 SM00382 ATPases associated with a variety of cellular activities A9255_15400 SM00382 ATPases associated with a variety of cellular activities A9255_15420 SM00354 helix_turn _helix lactose operon repressor A9255_15565 SM00363 S4 RNA-binding domain A9255_15630 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A9255_15670 SM00642 Alpha-amylase domain A9255_15845 SM00420 helix_turn_helix, Deoxyribose operon repressor A9255_15845 SM01134 A9255_15845 A9255_15855 SM00450 Rhodanese Homology Domain A9255_15895 SM00899 A9255_15895 A9255_15905 SM00316 Ribosomal protein S1-like RNA-binding domain A9255_15905 SM00732 Likely ribonuclease with RNase H fold. A9255_15915 SM00448 cheY-homologous receiver domain A9255_15915 SM00862 Transcriptional regulatory protein, C terminal A9255_15920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9255_15920 SM00387 Histidine kinase-like ATPases A9255_15920 SM00388 His Kinase A (phosphoacceptor) domain A9255_15940 SM00382 ATPases associated with a variety of cellular activities A9255_15950 SM00062 Bacterial periplasmic substrate-binding proteins A9255_15950 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A9255_15995 SM00729 Elongator protein 3, MiaB family, Radical SAM A9255_16000 SM00382 ATPases associated with a variety of cellular activities A9255_16000 SM00448 cheY-homologous receiver domain A9255_16005 SM00091 PAS domain A9255_16005 SM00387 Histidine kinase-like ATPases A9255_16005 SM00388 His Kinase A (phosphoacceptor) domain A9255_16010 SM01230 A9255_16010 A9255_16085 SM00487 DEAD-like helicases superfamily A9255_16085 SM00490 helicase superfamily c-terminal domain A9255_16095 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9255_16095 SM00954 Region found in RelA / SpoT proteins A9255_16100 SM01409 A9255_16100 A9255_16105 SM00072 Guanylate kinase homologues. A9255_16110 SM00532 Ligase N family A9255_16170 SM00382 ATPases associated with a variety of cellular activities A9255_16175 SM00382 ATPases associated with a variety of cellular activities A9255_16200 SM00342 helix_turn_helix, arabinose operon control protein A9255_16220 SM00912 haemagglutination activity domain A9255_16280 SM00382 ATPases associated with a variety of cellular activities A9255_16280 SM01086 C-terminal, D2-small domain, of ClpB protein A9255_16405 SM00530 Helix-turn-helix XRE-family like proteins A9255_16420 SM00382 ATPases associated with a variety of cellular activities A9255_16440 SM01133 A9255_16440 A9255_16490 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A9255_16490 SM00474 3'-5' exonuclease A9255_16490 SM00475 5'-3' exonuclease A9255_16490 SM00482 DNA polymerase A domain A9255_16535 SM00100 Cyclic nucleotide-monophosphate binding domain A9255_16535 SM00419 helix_turn_helix, cAMP Regulatory protein A9255_16580 SM00382 ATPases associated with a variety of cellular activities A9255_16645 SM00838 Elongation factor G C-terminus A9255_16645 SM00889 Elongation factor G, domain IV A9255_16660 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A9255_16660 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A9255_16665 SM00649 Ribosomal protein L11/L12 A9255_16690 SM00663 RNA polymerase I subunit A N-terminus A9255_16705 SM00382 ATPases associated with a variety of cellular activities A9255_16735 SM00421 helix_turn_helix, Lux Regulon A9255_16745 SM00829 Enoylreductase A9255_16765 SM00876 Biotin and Thiamin Synthesis associated domain A9255_16835 SM00411 bacterial (prokaryotic) histone like domain A9255_16845 SM01209 A9255_16845 A9255_16845 SM01210 A9255_16845 A9255_16850 SM00798 AICARFT/IMPCHase bienzyme A9255_16850 SM00851 MGS-like domain A9255_16885 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9255_16885 SM00895 A9255_16885 A9255_16900 SM00796 Allophanate hydrolase subunit 1 A9255_16900 SM00797 Allophanate hydrolase subunit 2 A9255_16905 SM00878 Biotin carboxylase C-terminal domain A9255_16955 SM00923 MbtH-like protein A9255_17000 SM00382 ATPases associated with a variety of cellular activities A9255_17000 SM00962 SRP54-type protein, GTPase domain A9255_17000 SM00963 SRP54-type protein, helical bundle domain A9255_17005 SM00382 ATPases associated with a variety of cellular activities A9255_17035 SM00347 helix_turn_helix multiple antibiotic resistance protein A9255_17040 SM00530 Helix-turn-helix XRE-family like proteins A9255_17055 SM00507 HNH nucleases A9255_17115 SM00878 Biotin carboxylase C-terminal domain A9255_17130 SM00829 Enoylreductase A9255_17155 SM00316 Ribosomal protein S1-like RNA-binding domain A9255_17220 SM01005 Alanine racemase, C-terminal domain A9255_17255 SM00382 ATPases associated with a variety of cellular activities A9255_17275 SM00116 Domain in cystathionine beta-synthase and other proteins. A9255_17285 SM00382 ATPases associated with a variety of cellular activities A9255_17320 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A9255_17325 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A9255_17375 SM00073 Histidine Phosphotransfer domain A9255_17375 SM00091 PAS domain A9255_17375 SM00387 Histidine kinase-like ATPases A9255_17375 SM00388 His Kinase A (phosphoacceptor) domain A9255_17375 SM00448 cheY-homologous receiver domain A9255_17390 SM00749 bacterial OsmY and nodulation domain A9255_17505 SM00507 HNH nucleases A9255_17510 SM00825 Beta-ketoacyl synthase A9255_17525 SM00825 Beta-ketoacyl synthase A9255_17580 SM00563 Phosphate acyltransferases A9255_17815 SM00400 zinc finger A9255_17815 SM00493 A9255_17815 A9255_17815 SM00766 DNA primase DnaG DnaB-binding A9255_17850 SM01207 A9255_17850 A9255_17855 SM00905 Dihydroneopterin aldolase A9255_17865 SM00287 Bacterial SH3 domain homologues A9255_17870 SM01118 A9255_17870 A9255_17930 SM00387 Histidine kinase-like ATPases A9255_17930 SM00433 TopoisomeraseII A9255_17935 SM00434 DNA Topoisomerase IV A9255_17940 SM00563 Phosphate acyltransferases A9255_17965 SM00650 Ribosomal RNA adenine dimethylases A9255_17985 SM00271 DnaJ molecular chaperone homology domain A9255_17995 SM00487 DEAD-like helicases superfamily A9255_17995 SM00490 helicase superfamily c-terminal domain A9255_18000 SM00486 DNA polymerase type-B family A9255_18020 SM00382 ATPases associated with a variety of cellular activities A9255_18040 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A9255_18090 SM00382 ATPases associated with a variety of cellular activities A9255_18100 SM00646 A9255_18100 A9255_18120 SM00925 MltA specific insert domain A9255_18160 SM00235 Zinc-dependent metalloprotease A9255_18170 SM00382 ATPases associated with a variety of cellular activities A9255_18190 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A9255_18190 SM00475 5'-3' exonuclease A9255_18255 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9255_18300 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A9255_18310 SM00935 Outer membrane protein (OmpH-like) A9255_18340 SM00481 DNA polymerase alpha chain like domain A9255_18355 SM00977 TilS substrate C-terminal domain A9255_18405 SM00382 ATPases associated with a variety of cellular activities A9255_18405 SM00930 A9255_18405 A9255_18475 SM00346 helix_turn_helix isocitrate lyase regulation A9255_18505 SM00563 Phosphate acyltransferases A9255_18585 SM00530 Helix-turn-helix XRE-family like proteins A9255_18620 SM00507 HNH nucleases A9255_18690 SM00507 HNH nucleases A9255_18770 SM00232 JAB/MPN domain A9255_18815 SM00829 Enoylreductase A9255_18845 SM00507 HNH nucleases A9255_18870 SM00382 ATPases associated with a variety of cellular activities A9255_18875 SM01005 Alanine racemase, C-terminal domain A9255_18940 SM00671 Sel1-like repeats. A9255_19025 SM00420 helix_turn_helix, Deoxyribose operon repressor A9255_19025 SM01134 A9255_19025 A9255_19090 SM01004 Delta-aminolevulinic acid dehydratase A9255_19095 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A9255_19240 SM00320 WD40 repeats A9255_19250 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A9255_19250 SM00450 Rhodanese Homology Domain A9255_19305 SM00257 Lysin motif A9255_19320 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A9255_19320 SM00534 ATPase domain of DNA mismatch repair MUTS family A9255_19360 SM00833 Cobalamin synthesis protein cobW C-terminal domain A9255_19400 SM00382 ATPases associated with a variety of cellular activities A9255_19420 SM00387 Histidine kinase-like ATPases A9255_19425 SM00421 helix_turn_helix, Lux Regulon A9255_19425 SM00448 cheY-homologous receiver domain A9255_19465 SM00947 Carbonic anhydrase A9255_19470 SM00382 ATPases associated with a variety of cellular activities A9255_19525 SM00487 DEAD-like helicases superfamily A9255_19525 SM00490 helicase superfamily c-terminal domain A9255_19525 SM00847 Helicase associated domain (HA2) Add an annotation A9255_19570 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9255_19575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9255_19575 SM00387 Histidine kinase-like ATPases A9255_19575 SM00388 His Kinase A (phosphoacceptor) domain A9255_19575 SM00448 cheY-homologous receiver domain A9255_19585 SM00954 Region found in RelA / SpoT proteins A9255_19600 SM01192 A9255_19600 A9255_19600 SM01193 A9255_19600 A9255_19655 SM00422 helix_turn_helix, mercury resistance A9255_19665 SM00244 prohibitin homologues A9255_19690 SM00825 Beta-ketoacyl synthase A9255_19690 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A9255_19715 SM00823 Phosphopantetheine attachment site A9255_19735 SM00382 ATPases associated with a variety of cellular activities A9255_19765 SM01001 AIR carboxylase A9255_19780 SM00840 A9255_19780 A9255_19870 SM00530 Helix-turn-helix XRE-family like proteins A9255_19890 SM00487 DEAD-like helicases superfamily A9255_19890 SM00490 helicase superfamily c-terminal domain A9255_19895 SM00778 Zinc-binding domain of primase-helicase A9255_19945 SM01252 A9255_19945 A9255_19960 SM00507 HNH nucleases A9255_20040 SM00232 JAB/MPN domain A9255_20100 SM00778 Zinc-binding domain of primase-helicase A9255_20100 SM00885 D5 N terminal like A9255_20165 SM00530 Helix-turn-helix XRE-family like proteins A9255_20180 SM00382 ATPases associated with a variety of cellular activities A9255_20230 SM00507 HNH nucleases A9255_20305 SM00232 JAB/MPN domain A9255_20440 SM00823 Phosphopantetheine attachment site A9255_20465 SM00422 helix_turn_helix, mercury resistance A9255_20495 SM00257 Lysin motif A9255_20500 SM00849 Metallo-beta-lactamase superfamily A9255_20515 SM00479 A9255_20515 A9255_20530 SM00506 Appr-1"-p processing enzyme A9255_20535 SM00861 Transketolase, pyrimidine binding domain A9255_20540 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A9255_20560 SM00903 Flavin reductase like domain A9255_20570 SM00342 helix_turn_helix, arabinose operon control protein A9255_20620 SM00347 helix_turn_helix multiple antibiotic resistance protein A9255_20670 SM00421 helix_turn_helix, Lux Regulon