D3790_11110 29ef43561d6841684c87ef4e04750c8b 308 SUPERFAMILY SSF52768 16 303 1.19E-90 T 01-11-2018 IPR023696 Ureohydrolase domain superfamily D3790_11110 29ef43561d6841684c87ef4e04750c8b 308 Hamap MF_01418 Agmatinase [speB]. 3 306 66.775 T 01-11-2018 IPR023694 Agmatinase GO:0008783|GO:0009446|GO:0030145 KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305 D3790_11110 29ef43561d6841684c87ef4e04750c8b 308 ProSitePatterns PS01053 Arginase family signature. 230 251 - T 01-11-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 D3790_11110 29ef43561d6841684c87ef4e04750c8b 308 Pfam PF00491 Arginase family 36 298 2.4E-86 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 D3790_11110 29ef43561d6841684c87ef4e04750c8b 308 Gene3D G3DSA:3.40.800.10 2 307 2.2E-101 T 01-11-2018 D3790_11110 29ef43561d6841684c87ef4e04750c8b 308 PIRSF PIRSF036979 16 306 6.6E-98 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 D3790_11110 29ef43561d6841684c87ef4e04750c8b 308 TIGRFAM TIGR01230 agmatinase: agmatinase 25 300 3.0E-107 T 01-11-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 D3790_05060 fc9dfdf9cb0305587d6c77bdf666145c 106 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 12 99 4.0E-38 T 01-11-2018 IPR007458 Protein of unknown function DUF496 D3790_05060 fc9dfdf9cb0305587d6c77bdf666145c 106 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 9 103 24.964 T 01-11-2018 IPR007458 Protein of unknown function DUF496 D3790_05060 fc9dfdf9cb0305587d6c77bdf666145c 106 PIRSF PIRSF028773 1 105 2.8E-49 T 01-11-2018 IPR007458 Protein of unknown function DUF496 D3790_05060 fc9dfdf9cb0305587d6c77bdf666145c 106 Pfam PF04363 Protein of unknown function (DUF496) 9 100 3.0E-45 T 01-11-2018 IPR007458 Protein of unknown function DUF496 D3790_16955 1848af0a2df721cb0668285f5b79a15f 209 Pfam PF01926 50S ribosome-binding GTPase 30 148 4.2E-20 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_16955 1848af0a2df721cb0668285f5b79a15f 209 SUPERFAMILY SSF52540 18 197 1.01E-34 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16955 1848af0a2df721cb0668285f5b79a15f 209 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 16 199 27.833 T 01-11-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 D3790_16955 1848af0a2df721cb0668285f5b79a15f 209 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 12 195 1.2E-75 T 01-11-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 D3790_16955 1848af0a2df721cb0668285f5b79a15f 209 Gene3D G3DSA:3.40.50.300 4 205 2.2E-59 T 01-11-2018 D3790_18480 e278bbc691e9a67cfe6e59f512a3d125 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 2.8E-49 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D3790_18480 e278bbc691e9a67cfe6e59f512a3d125 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 2.8E-49 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D3790_18480 e278bbc691e9a67cfe6e59f512a3d125 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 2.8E-49 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D3790_18480 e278bbc691e9a67cfe6e59f512a3d125 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 2.8E-49 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D3790_18480 e278bbc691e9a67cfe6e59f512a3d125 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 2.8E-49 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D3790_18480 e278bbc691e9a67cfe6e59f512a3d125 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 2.8E-49 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D3790_18480 e278bbc691e9a67cfe6e59f512a3d125 319 Gene3D G3DSA:3.90.226.10 4 319 7.1E-121 T 01-11-2018 D3790_18480 e278bbc691e9a67cfe6e59f512a3d125 319 SUPERFAMILY SSF52096 5 318 2.11E-103 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily D3790_18480 e278bbc691e9a67cfe6e59f512a3d125 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 49.82 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D3790_18480 e278bbc691e9a67cfe6e59f512a3d125 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 4.7E-166 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D3790_18480 e278bbc691e9a67cfe6e59f512a3d125 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 3.8E-62 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D3790_18845 7d9329eb1151c637f9397a24be232149 850 PIRSF PIRSF037149 1 835 0.0 T 01-11-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 D3790_18845 7d9329eb1151c637f9397a24be232149 850 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 5.7E-13 T 01-11-2018 D3790_18845 7d9329eb1151c637f9397a24be232149 850 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 5.7E-13 T 01-11-2018 D3790_18845 7d9329eb1151c637f9397a24be232149 850 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 5.7E-13 T 01-11-2018 D3790_18845 7d9329eb1151c637f9397a24be232149 850 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 5.7E-13 T 01-11-2018 D3790_18845 7d9329eb1151c637f9397a24be232149 850 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 768 7.3E-16 T 01-11-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_18845 7d9329eb1151c637f9397a24be232149 850 SUPERFAMILY SSF51905 145 311 5.68E-30 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_18845 7d9329eb1151c637f9397a24be232149 850 SUPERFAMILY SSF51905 2 189 3.89E-39 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_18845 7d9329eb1151c637f9397a24be232149 850 Gene3D G3DSA:1.10.10.1100 423 477 1.6E-11 T 01-11-2018 D3790_18845 7d9329eb1151c637f9397a24be232149 850 Gene3D G3DSA:3.50.50.60 8 283 1.5E-82 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_18845 7d9329eb1151c637f9397a24be232149 850 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 01-11-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 D3790_18845 7d9329eb1151c637f9397a24be232149 850 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 288 2.5E-51 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D3790_18845 7d9329eb1151c637f9397a24be232149 850 Pfam PF04324 BFD-like [2Fe-2S] binding domain 425 471 4.8E-14 T 01-11-2018 IPR007419 BFD-like [2Fe-2S]-binding domain D3790_18845 7d9329eb1151c637f9397a24be232149 850 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 01-11-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_18845 7d9329eb1151c637f9397a24be232149 850 SUPERFAMILY SSF56014 633 808 3.79E-46 T 01-11-2018 D3790_18845 7d9329eb1151c637f9397a24be232149 850 SUPERFAMILY SSF55124 502 627 1.29E-27 T 01-11-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_18845 7d9329eb1151c637f9397a24be232149 850 Gene3D G3DSA:3.30.413.10 632 800 3.0E-32 T 01-11-2018 D3790_18845 7d9329eb1151c637f9397a24be232149 850 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 1.2E-11 T 01-11-2018 D3790_18845 7d9329eb1151c637f9397a24be232149 850 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.2E-11 T 01-11-2018 D3790_18845 7d9329eb1151c637f9397a24be232149 850 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 1.2E-11 T 01-11-2018 D3790_18845 7d9329eb1151c637f9397a24be232149 850 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 1.2E-11 T 01-11-2018 D3790_18845 7d9329eb1151c637f9397a24be232149 850 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 621 3.6E-9 T 01-11-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_18845 7d9329eb1151c637f9397a24be232149 850 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 7.0E-6 T 01-11-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_18845 7d9329eb1151c637f9397a24be232149 850 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 7.0E-6 T 01-11-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_18845 7d9329eb1151c637f9397a24be232149 850 Gene3D G3DSA:3.50.50.60 110 246 1.5E-82 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_06090 ac62d9b5346add8873f690e202ed9278 331 SUPERFAMILY SSF51735 3 166 1.35E-70 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_06090 ac62d9b5346add8873f690e202ed9278 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 01-11-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_06090 ac62d9b5346add8873f690e202ed9278 331 Gene3D G3DSA:3.30.360.10 149 314 1.1E-158 T 01-11-2018 D3790_06090 ac62d9b5346add8873f690e202ed9278 331 SUPERFAMILY SSF55347 149 312 8.42E-81 T 01-11-2018 D3790_06090 ac62d9b5346add8873f690e202ed9278 331 Gene3D G3DSA:3.40.50.720 4 326 1.1E-158 T 01-11-2018 D3790_06090 ac62d9b5346add8873f690e202ed9278 331 PIRSF PIRSF000149 1 331 1.4E-134 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_06090 ac62d9b5346add8873f690e202ed9278 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 3.2E-47 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_06090 ac62d9b5346add8873f690e202ed9278 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 3.2E-47 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_06090 ac62d9b5346add8873f690e202ed9278 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 3.2E-47 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_06090 ac62d9b5346add8873f690e202ed9278 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 3.2E-47 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_06090 ac62d9b5346add8873f690e202ed9278 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 3.2E-47 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_06090 ac62d9b5346add8873f690e202ed9278 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 1.6E-137 T 01-11-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_06090 ac62d9b5346add8873f690e202ed9278 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 9.4E-42 T 01-11-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_06090 ac62d9b5346add8873f690e202ed9278 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 2.3E-70 T 01-11-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_06090 ac62d9b5346add8873f690e202ed9278 331 SMART SM00846 3 150 9.9E-100 T 01-11-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_12845 e55cdfb1432f262f5df4ce8305b29237 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 2.0E-5 T 01-11-2018 D3790_12845 e55cdfb1432f262f5df4ce8305b29237 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.0E-5 T 01-11-2018 D3790_12845 e55cdfb1432f262f5df4ce8305b29237 594 PIRSF PIRSF000171 1 576 1.9E-43 T 01-11-2018 D3790_12845 e55cdfb1432f262f5df4ce8305b29237 594 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 4 582 0.0 T 01-11-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 D3790_12845 e55cdfb1432f262f5df4ce8305b29237 594 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 9.0E-10 T 01-11-2018 D3790_12845 e55cdfb1432f262f5df4ce8305b29237 594 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 9.0E-10 T 01-11-2018 D3790_12845 e55cdfb1432f262f5df4ce8305b29237 594 SUPERFAMILY SSF46977 444 583 7.19E-44 T 01-11-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_12845 e55cdfb1432f262f5df4ce8305b29237 594 Pfam PF00890 FAD binding domain 7 397 2.5E-114 T 01-11-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_12845 e55cdfb1432f262f5df4ce8305b29237 594 SUPERFAMILY SSF51905 2 423 1.41E-73 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_12845 e55cdfb1432f262f5df4ce8305b29237 594 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 9.1E-244 T 01-11-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_12845 e55cdfb1432f262f5df4ce8305b29237 594 Gene3D G3DSA:3.90.700.10 237 363 8.5E-163 T 01-11-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_12845 e55cdfb1432f262f5df4ce8305b29237 594 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 01-11-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_12845 e55cdfb1432f262f5df4ce8305b29237 594 Gene3D G3DSA:1.20.58.100 424 538 7.6E-34 T 01-11-2018 D3790_12845 e55cdfb1432f262f5df4ce8305b29237 594 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 2.3E-37 T 01-11-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_12845 e55cdfb1432f262f5df4ce8305b29237 594 SUPERFAMILY SSF56425 227 358 6.43E-43 T 01-11-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_12845 e55cdfb1432f262f5df4ce8305b29237 594 Gene3D G3DSA:3.50.50.60 7 409 8.5E-163 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_12845 e55cdfb1432f262f5df4ce8305b29237 594 Gene3D G3DSA:4.10.80.40 543 577 3.7E-20 T 01-11-2018 D3790_15130 30e2afc21a167ffd27a17005c607f6b9 328 Pfam PF13531 Bacterial extracellular solute-binding protein 36 279 7.2E-45 T 01-11-2018 D3790_15130 30e2afc21a167ffd27a17005c607f6b9 328 SUPERFAMILY SSF53850 20 326 3.07E-88 T 01-11-2018 D3790_15130 30e2afc21a167ffd27a17005c607f6b9 328 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 11 325 4.4E-163 T 01-11-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 D3790_15130 30e2afc21a167ffd27a17005c607f6b9 328 Gene3D G3DSA:3.40.190.10 26 294 7.9E-133 T 01-11-2018 D3790_15130 30e2afc21a167ffd27a17005c607f6b9 328 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 144 152 - T 01-11-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 D3790_15130 30e2afc21a167ffd27a17005c607f6b9 328 Gene3D G3DSA:3.40.190.10 113 324 7.9E-133 T 01-11-2018 D3790_10225 f012b46850dd61b940f498eb26c2d810 412 SUPERFAMILY SSF53218 181 325 1.83E-41 T 01-11-2018 IPR036425 MoaB/Mog-like domain superfamily D3790_10225 f012b46850dd61b940f498eb26c2d810 412 SMART SM00852 183 320 4.2E-41 T 01-11-2018 IPR001453 MoaB/Mog domain D3790_10225 f012b46850dd61b940f498eb26c2d810 412 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 316 7.5E-33 T 01-11-2018 IPR001453 MoaB/Mog domain D3790_10225 f012b46850dd61b940f498eb26c2d810 412 SUPERFAMILY SSF63867 331 410 5.76E-23 T 01-11-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D3790_10225 f012b46850dd61b940f498eb26c2d810 412 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 256 289 - T 01-11-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 D3790_10225 f012b46850dd61b940f498eb26c2d810 412 Gene3D G3DSA:2.40.340.10 331 401 1.2E-142 T 01-11-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D3790_10225 f012b46850dd61b940f498eb26c2d810 412 SUPERFAMILY SSF63882 9 178 6.8E-56 T 01-11-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D3790_10225 f012b46850dd61b940f498eb26c2d810 412 Pfam PF03453 MoeA N-terminal region (domain I and II) 10 170 6.8E-45 T 01-11-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D3790_10225 f012b46850dd61b940f498eb26c2d810 412 Pfam PF03454 MoeA C-terminal region (domain IV) 334 406 7.8E-18 T 01-11-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D3790_10225 f012b46850dd61b940f498eb26c2d810 412 Gene3D G3DSA:3.90.105.10 29 177 1.2E-142 T 01-11-2018 D3790_10225 f012b46850dd61b940f498eb26c2d810 412 Gene3D G3DSA:3.40.980.10 28 330 1.2E-142 T 01-11-2018 IPR036425 MoaB/Mog-like domain superfamily D3790_10225 f012b46850dd61b940f498eb26c2d810 412 Pfam PF00994 Probable molybdopterin binding domain 183 319 1.9E-24 T 01-11-2018 IPR001453 MoaB/Mog domain D3790_10225 f012b46850dd61b940f498eb26c2d810 412 Gene3D G3DSA:2.170.190.11 53 144 1.2E-142 T 01-11-2018 D3790_04195 c64703e3bd612ec784588fb655dfe62f 281 Gene3D G3DSA:3.30.70.660 120 257 4.7E-49 T 01-11-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 D3790_04195 c64703e3bd612ec784588fb655dfe62f 281 Pfam PF01416 tRNA pseudouridine synthase 157 259 2.4E-28 T 01-11-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_04195 c64703e3bd612ec784588fb655dfe62f 281 Pfam PF01416 tRNA pseudouridine synthase 23 117 6.4E-10 T 01-11-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_04195 c64703e3bd612ec784588fb655dfe62f 281 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 16 258 35.536 T 01-11-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_04195 c64703e3bd612ec784588fb655dfe62f 281 PIRSF PIRSF001430 15 267 7.8E-79 T 01-11-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_04195 c64703e3bd612ec784588fb655dfe62f 281 SUPERFAMILY SSF55120 15 270 1.25E-92 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_04195 c64703e3bd612ec784588fb655dfe62f 281 Gene3D G3DSA:3.30.70.580 13 119 5.2E-42 T 01-11-2018 D3790_04195 c64703e3bd612ec784588fb655dfe62f 281 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 17 253 9.2E-79 T 01-11-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_12475 c2ec78b38c003dae78ecdabf4fd0ae2c 308 SUPERFAMILY SSF103481 190 290 8.24E-11 T 01-11-2018 D3790_12475 c2ec78b38c003dae78ecdabf4fd0ae2c 308 SUPERFAMILY SSF103481 42 144 1.28E-10 T 01-11-2018 D3790_12475 c2ec78b38c003dae78ecdabf4fd0ae2c 308 Pfam PF00892 EamA-like transporter family 8 142 2.1E-20 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D3790_12475 c2ec78b38c003dae78ecdabf4fd0ae2c 308 Pfam PF00892 EamA-like transporter family 156 290 5.7E-20 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D3790_14095 8e39996b9f2edffc5d08fd44037b6ba9 170 Pfam PF01327 Polypeptide deformylase 4 152 9.1E-51 T 01-11-2018 IPR023635 Peptide deformylase D3790_14095 8e39996b9f2edffc5d08fd44037b6ba9 170 SUPERFAMILY SSF56420 3 165 5.1E-62 T 01-11-2018 IPR036821 Peptide deformylase superfamily D3790_14095 8e39996b9f2edffc5d08fd44037b6ba9 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.715 T 01-11-2018 IPR023635 Peptide deformylase D3790_14095 8e39996b9f2edffc5d08fd44037b6ba9 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 3.6E-65 T 01-11-2018 IPR023635 Peptide deformylase D3790_14095 8e39996b9f2edffc5d08fd44037b6ba9 170 PRINTS PR01576 Peptide deformylase signature 101 119 1.4E-37 T 01-11-2018 IPR023635 Peptide deformylase D3790_14095 8e39996b9f2edffc5d08fd44037b6ba9 170 PRINTS PR01576 Peptide deformylase signature 33 62 1.4E-37 T 01-11-2018 IPR023635 Peptide deformylase D3790_14095 8e39996b9f2edffc5d08fd44037b6ba9 170 PRINTS PR01576 Peptide deformylase signature 120 149 1.4E-37 T 01-11-2018 IPR023635 Peptide deformylase D3790_14095 8e39996b9f2edffc5d08fd44037b6ba9 170 PRINTS PR01576 Peptide deformylase signature 89 100 1.4E-37 T 01-11-2018 IPR023635 Peptide deformylase D3790_14095 8e39996b9f2edffc5d08fd44037b6ba9 170 Gene3D G3DSA:3.90.45.10 2 169 2.3E-66 T 01-11-2018 IPR036821 Peptide deformylase superfamily D3790_14095 8e39996b9f2edffc5d08fd44037b6ba9 170 PIRSF PIRSF004749 1 170 1.2E-57 T 01-11-2018 IPR023635 Peptide deformylase D3790_14700 77c870c01b11de39aa389cf482b85769 247 Gene3D G3DSA:3.30.230.70 18 247 1.7E-61 T 01-11-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D3790_14700 77c870c01b11de39aa389cf482b85769 247 Pfam PF03725 3' exoribonuclease family, domain 2 163 229 1.3E-9 T 01-11-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D3790_14700 77c870c01b11de39aa389cf482b85769 247 ProSitePatterns PS01277 Ribonuclease PH signature. 121 134 - T 01-11-2018 IPR018336 Ribonuclease PH, conserved site D3790_14700 77c870c01b11de39aa389cf482b85769 247 SUPERFAMILY SSF55666 158 242 5.63E-25 T 01-11-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D3790_14700 77c870c01b11de39aa389cf482b85769 247 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 7 241 2.1E-111 T 01-11-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 D3790_14700 77c870c01b11de39aa389cf482b85769 247 Hamap MF_00564 Ribonuclease PH [rph]. 16 242 45.096 T 01-11-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 D3790_14700 77c870c01b11de39aa389cf482b85769 247 SUPERFAMILY SSF54211 5 186 1.11E-43 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_14700 77c870c01b11de39aa389cf482b85769 247 Pfam PF01138 3' exoribonuclease family, domain 1 15 145 4.7E-24 T 01-11-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D3790_12690 046d5096410f2b5c73bf4537906a8e87 408 SUPERFAMILY SSF52374 64 223 1.82E-21 T 01-11-2018 D3790_12690 046d5096410f2b5c73bf4537906a8e87 408 Gene3D G3DSA:3.40.50.300 231 399 1.0E-58 T 01-11-2018 D3790_12690 046d5096410f2b5c73bf4537906a8e87 408 SUPERFAMILY SSF47413 6 58 4.15E-9 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_12690 046d5096410f2b5c73bf4537906a8e87 408 Gene3D G3DSA:3.40.50.620 65 230 1.4E-44 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_12690 046d5096410f2b5c73bf4537906a8e87 408 Gene3D G3DSA:1.10.260.40 5 64 3.5E-7 T 01-11-2018 D3790_12690 046d5096410f2b5c73bf4537906a8e87 408 SUPERFAMILY SSF52540 232 404 1.72E-28 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_12690 046d5096410f2b5c73bf4537906a8e87 408 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 3.6E-150 T 01-11-2018 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0000309|GO:0009435 KEGG: 00760+2.7.7.1+2.7.1.22 D3790_12690 046d5096410f2b5c73bf4537906a8e87 408 SMART SM00530 6 62 4.9E-7 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_12690 046d5096410f2b5c73bf4537906a8e87 408 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 1.4E-17 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D3790_12690 046d5096410f2b5c73bf4537906a8e87 408 Pfam PF01381 Helix-turn-helix 7 57 3.9E-9 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_12690 046d5096410f2b5c73bf4537906a8e87 408 Pfam PF13521 AAA domain 234 394 5.5E-33 T 01-11-2018 IPR038727 NadR/Ttd14, AAA domain D3790_12690 046d5096410f2b5c73bf4537906a8e87 408 PIRSF PIRSF004776 3 408 7.9E-201 T 01-11-2018 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 D3790_03665 9c387fec989032a359d234a0d361de90 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 1.3E-34 T 01-11-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_03665 9c387fec989032a359d234a0d361de90 588 Gene3D G3DSA:3.90.700.10 246 350 1.5E-172 T 01-11-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_03665 9c387fec989032a359d234a0d361de90 588 PIRSF PIRSF000171 1 580 8.4E-47 T 01-11-2018 D3790_03665 9c387fec989032a359d234a0d361de90 588 SUPERFAMILY SSF46977 452 588 7.72E-46 T 01-11-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_03665 9c387fec989032a359d234a0d361de90 588 Gene3D G3DSA:3.50.50.60 9 416 1.5E-172 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_03665 9c387fec989032a359d234a0d361de90 588 Gene3D G3DSA:4.10.80.40 548 588 9.1E-26 T 01-11-2018 D3790_03665 9c387fec989032a359d234a0d361de90 588 SUPERFAMILY SSF56425 236 356 2.39E-42 T 01-11-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_03665 9c387fec989032a359d234a0d361de90 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 4.7E-5 T 01-11-2018 D3790_03665 9c387fec989032a359d234a0d361de90 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 4.7E-5 T 01-11-2018 D3790_03665 9c387fec989032a359d234a0d361de90 588 Pfam PF00890 FAD binding domain 9 405 3.2E-118 T 01-11-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_03665 9c387fec989032a359d234a0d361de90 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 1.1E-274 T 01-11-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_03665 9c387fec989032a359d234a0d361de90 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 01-11-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_03665 9c387fec989032a359d234a0d361de90 588 Gene3D G3DSA:1.20.58.100 431 547 1.5E-38 T 01-11-2018 D3790_03665 9c387fec989032a359d234a0d361de90 588 SUPERFAMILY SSF51905 4 438 3.71E-76 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_03665 9c387fec989032a359d234a0d361de90 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 9.5E-241 T 01-11-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_14015 27d6536477b9b6b7fc71a2d3490d13d4 508 Gene3D G3DSA:3.30.230.10 5 167 3.8E-5 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3790_14015 27d6536477b9b6b7fc71a2d3490d13d4 508 Gene3D G3DSA:3.40.50.300 186 499 1.7E-58 T 01-11-2018 D3790_14015 27d6536477b9b6b7fc71a2d3490d13d4 508 SUPERFAMILY SSF54211 11 169 1.48E-30 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_14015 27d6536477b9b6b7fc71a2d3490d13d4 508 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 389 5.4E-92 T 01-11-2018 IPR000523 Magnesium chelatase ChlI domain D3790_14015 27d6536477b9b6b7fc71a2d3490d13d4 508 SMART SM00382 210 390 3.6E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_14015 27d6536477b9b6b7fc71a2d3490d13d4 508 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 494 2.7E-210 T 01-11-2018 IPR004482 Mg chelatase-related protein D3790_14015 27d6536477b9b6b7fc71a2d3490d13d4 508 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 3.2E-44 T 01-11-2018 D3790_14015 27d6536477b9b6b7fc71a2d3490d13d4 508 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.7E-8 T 01-11-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 D3790_14015 27d6536477b9b6b7fc71a2d3490d13d4 508 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.7E-8 T 01-11-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 D3790_14015 27d6536477b9b6b7fc71a2d3490d13d4 508 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.7E-8 T 01-11-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 D3790_14015 27d6536477b9b6b7fc71a2d3490d13d4 508 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 341 353 7.7E-8 T 01-11-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 D3790_14015 27d6536477b9b6b7fc71a2d3490d13d4 508 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 402 494 7.5E-27 T 01-11-2018 IPR025158 Mg chelatase-related protein, C-terminal domain D3790_14015 27d6536477b9b6b7fc71a2d3490d13d4 508 SUPERFAMILY SSF52540 190 503 5.94E-48 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_15535 91a1423360b98f34797c2f14ad0bde48 46 SUPERFAMILY SSF57840 1 41 1.01E-13 T 01-11-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_15535 91a1423360b98f34797c2f14ad0bde48 46 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 41 0.004 T 01-11-2018 D3790_15535 91a1423360b98f34797c2f14ad0bde48 46 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.996 T 01-11-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_15535 91a1423360b98f34797c2f14ad0bde48 46 Pfam PF00444 Ribosomal protein L36 1 41 2.3E-17 T 01-11-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_15535 91a1423360b98f34797c2f14ad0bde48 46 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 01-11-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_15535 91a1423360b98f34797c2f14ad0bde48 46 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 11 41 2.7E-8 T 01-11-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_11935 fe8da8f699d47105d2c0f76543391a89 200 SUPERFAMILY SSF52833 1 195 9.68E-67 T 01-11-2018 IPR036249 Thioredoxin-like superfamily D3790_11935 fe8da8f699d47105d2c0f76543391a89 200 Pfam PF00578 AhpC/TSA family 5 139 3.6E-35 T 01-11-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D3790_11935 fe8da8f699d47105d2c0f76543391a89 200 Gene3D G3DSA:3.40.30.10 1 197 2.4E-73 T 01-11-2018 D3790_11935 fe8da8f699d47105d2c0f76543391a89 200 PIRSF PIRSF000239 1 200 4.4E-59 T 01-11-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D3790_11935 fe8da8f699d47105d2c0f76543391a89 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 195 3.7E-11 T 01-11-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D3790_10235 319fa5c94f7c402bda4e19d5a60c8fcf 531 Pfam PF00005 ABC transporter 336 467 5.9E-21 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_10235 319fa5c94f7c402bda4e19d5a60c8fcf 531 SUPERFAMILY SSF52540 297 523 7.43E-45 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_10235 319fa5c94f7c402bda4e19d5a60c8fcf 531 Gene3D G3DSA:3.40.50.300 2 279 4.6E-57 T 01-11-2018 D3790_10235 319fa5c94f7c402bda4e19d5a60c8fcf 531 Pfam PF12848 ABC transporter 224 309 4.4E-20 T 01-11-2018 IPR032781 ABC-transporter extension domain D3790_10235 319fa5c94f7c402bda4e19d5a60c8fcf 531 Gene3D G3DSA:3.40.50.300 282 530 1.6E-53 T 01-11-2018 D3790_10235 319fa5c94f7c402bda4e19d5a60c8fcf 531 SMART SM00382 344 521 3.1E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_10235 319fa5c94f7c402bda4e19d5a60c8fcf 531 SMART SM00382 26 228 3.4E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_10235 319fa5c94f7c402bda4e19d5a60c8fcf 531 Pfam PF00005 ABC transporter 18 184 5.7E-20 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_10235 319fa5c94f7c402bda4e19d5a60c8fcf 531 SUPERFAMILY SSF52540 6 237 6.05E-45 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_18195 3c88fe85866c5ccb39c0760d7f53f46f 203 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site D3790_18195 3c88fe85866c5ccb39c0760d7f53f46f 203 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 32 6.7E-5 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site D3790_18195 3c88fe85866c5ccb39c0760d7f53f46f 203 PIRSF PIRSF004525 5 203 3.3E-57 T 01-11-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted D3790_18195 3c88fe85866c5ccb39c0760d7f53f46f 203 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 34 2.1E-7 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site D3790_09895 cfc31a59ecd79af7c136c9d1dc616c51 347 Gene3D G3DSA:3.40.50.40 234 347 1.7E-42 T 01-11-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 D3790_09895 cfc31a59ecd79af7c136c9d1dc616c51 347 Pfam PF00710 Asparaginase, N-terminal 25 214 2.2E-57 T 01-11-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 D3790_09895 cfc31a59ecd79af7c136c9d1dc616c51 347 SMART SM00870 25 341 9.9E-130 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 D3790_09895 cfc31a59ecd79af7c136c9d1dc616c51 347 PIRSF PIRSF500176 22 347 2.4E-80 T 01-11-2018 D3790_09895 cfc31a59ecd79af7c136c9d1dc616c51 347 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 28 36 - T 01-11-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 D3790_09895 cfc31a59ecd79af7c136c9d1dc616c51 347 SUPERFAMILY SSF53774 23 346 3.53E-100 T 01-11-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 D3790_09895 cfc31a59ecd79af7c136c9d1dc616c51 347 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 4 347 1.7E-143 T 01-11-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 D3790_09895 cfc31a59ecd79af7c136c9d1dc616c51 347 PIRSF PIRSF001220 21 347 2.4E-89 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 D3790_09895 cfc31a59ecd79af7c136c9d1dc616c51 347 PRINTS PR00139 Asparaginase/glutaminase family signature 281 299 8.8E-23 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 D3790_09895 cfc31a59ecd79af7c136c9d1dc616c51 347 PRINTS PR00139 Asparaginase/glutaminase family signature 26 37 8.8E-23 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 D3790_09895 cfc31a59ecd79af7c136c9d1dc616c51 347 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 8.8E-23 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 D3790_09895 cfc31a59ecd79af7c136c9d1dc616c51 347 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 01-11-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 D3790_09895 cfc31a59ecd79af7c136c9d1dc616c51 347 Gene3D G3DSA:3.40.50.1170 23 233 7.9E-77 T 01-11-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 D3790_09335 6d28f97d4495750a8940e45c897154ed 238 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 38 57 3.9E-67 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 D3790_09335 6d28f97d4495750a8940e45c897154ed 238 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 186 207 3.9E-67 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 D3790_09335 6d28f97d4495750a8940e45c897154ed 238 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 57 77 3.9E-67 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 D3790_09335 6d28f97d4495750a8940e45c897154ed 238 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 210 235 3.9E-67 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 D3790_09335 6d28f97d4495750a8940e45c897154ed 238 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 77 96 3.9E-67 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 D3790_09335 6d28f97d4495750a8940e45c897154ed 238 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 185 3.9E-67 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 D3790_09335 6d28f97d4495750a8940e45c897154ed 238 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 40 236 2.0E-93 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 D3790_09335 6d28f97d4495750a8940e45c897154ed 238 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 165 180 - T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 D3790_09335 6d28f97d4495750a8940e45c897154ed 238 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 108 122 3.1E-30 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 D3790_09335 6d28f97d4495750a8940e45c897154ed 238 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 96 108 3.1E-30 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 D3790_09335 6d28f97d4495750a8940e45c897154ed 238 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 136 148 3.1E-30 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 D3790_09335 6d28f97d4495750a8940e45c897154ed 238 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 226 236 3.1E-30 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 D3790_09335 6d28f97d4495750a8940e45c897154ed 238 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 36 45 3.1E-30 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 D3790_09335 6d28f97d4495750a8940e45c897154ed 238 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 158 170 3.1E-30 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 D3790_09335 6d28f97d4495750a8940e45c897154ed 238 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 213 225 - T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 D3790_09335 6d28f97d4495750a8940e45c897154ed 238 Pfam PF00813 FliP family 41 232 5.4E-81 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 D3790_12810 b218c3506473bb9f659a25960b6e90f5 364 Pfam PF02661 Fic/DOC family 109 220 5.5E-18 T 01-11-2018 IPR003812 Fido domain D3790_12810 b218c3506473bb9f659a25960b6e90f5 364 Gene3D G3DSA:1.10.3290.10 34 287 2.5E-46 T 01-11-2018 IPR036597 Fido-like domain superfamily D3790_12810 b218c3506473bb9f659a25960b6e90f5 364 SUPERFAMILY SSF140931 95 290 4.45E-35 T 01-11-2018 IPR036597 Fido-like domain superfamily D3790_12810 b218c3506473bb9f659a25960b6e90f5 364 Pfam PF13776 Domain of unknown function (DUF4172) 2 80 1.1E-26 T 01-11-2018 IPR025230 Domain of unknown function DUF4172 D3790_09350 bf6567a03aa296060d320f4fc28a8a0b 501 Gene3D G3DSA:3.60.90.10 377 501 1.7E-41 T 01-11-2018 D3790_09350 bf6567a03aa296060d320f4fc28a8a0b 501 Gene3D G3DSA:3.40.50.150 102 328 1.2E-53 T 01-11-2018 D3790_09350 bf6567a03aa296060d320f4fc28a8a0b 501 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 226 232 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D3790_09350 bf6567a03aa296060d320f4fc28a8a0b 501 Pfam PF01861 Protein of unknown function DUF43 115 339 3.6E-38 T 01-11-2018 IPR002723 N(4)-bis(aminopropyl)spermidine synthase, C-terminal D3790_09350 bf6567a03aa296060d320f4fc28a8a0b 501 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 388 501 25.068 T 01-11-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 D3790_09350 bf6567a03aa296060d320f4fc28a8a0b 501 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 390 500 1.1E-34 T 01-11-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 D3790_09350 bf6567a03aa296060d320f4fc28a8a0b 501 SUPERFAMILY SSF53335 179 259 1.33E-6 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_09350 bf6567a03aa296060d320f4fc28a8a0b 501 SUPERFAMILY SSF56276 390 501 7.06E-33 T 01-11-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 D3790_09350 bf6567a03aa296060d320f4fc28a8a0b 501 Pfam PF02675 S-adenosylmethionine decarboxylase 394 500 1.7E-32 T 01-11-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 D3790_08165 491fcac0881bd75ef5285bbff32679f7 383 SUPERFAMILY SSF53335 117 370 5.57E-74 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_08165 491fcac0881bd75ef5285bbff32679f7 383 Pfam PF02353 Mycolic acid cyclopropane synthetase 109 368 2.5E-98 T 01-11-2018 D3790_08165 491fcac0881bd75ef5285bbff32679f7 383 PIRSF PIRSF003085 3 379 1.2E-121 T 01-11-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 D3790_08165 491fcac0881bd75ef5285bbff32679f7 383 Gene3D G3DSA:3.40.50.150 117 376 2.4E-96 T 01-11-2018 D3790_11020 c7c9f926f312cfc90948e7b730f2fee3 600 SUPERFAMILY SSF56801 9 598 1.44E-113 T 01-11-2018 D3790_11020 c7c9f926f312cfc90948e7b730f2fee3 600 Pfam PF00501 AMP-binding enzyme 15 469 1.3E-92 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_11020 c7c9f926f312cfc90948e7b730f2fee3 600 Gene3D G3DSA:3.40.50.12780 317 462 3.4E-35 T 01-11-2018 D3790_11020 c7c9f926f312cfc90948e7b730f2fee3 600 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_11020 c7c9f926f312cfc90948e7b730f2fee3 600 Gene3D G3DSA:3.40.50.12780 2 300 1.6E-52 T 01-11-2018 D3790_19165 91239f551493ed044d1dee185091e7d9 862 Pfam PF05192 MutS domain III 281 568 8.2E-41 T 01-11-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 D3790_19165 91239f551493ed044d1dee185091e7d9 862 SMART SM00534 616 803 1.3E-122 T 01-11-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 D3790_19165 91239f551493ed044d1dee185091e7d9 862 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 697 713 - T 01-11-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 D3790_19165 91239f551493ed044d1dee185091e7d9 862 Pfam PF05190 MutS family domain IV 437 526 7.7E-29 T 01-11-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 D3790_19165 91239f551493ed044d1dee185091e7d9 862 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 19 852 25.331 T 01-11-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 D3790_19165 91239f551493ed044d1dee185091e7d9 862 Gene3D G3DSA:1.10.1420.10 278 568 9.8E-106 T 01-11-2018 D3790_19165 91239f551493ed044d1dee185091e7d9 862 Pfam PF01624 MutS domain I 20 131 1.5E-41 T 01-11-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 D3790_19165 91239f551493ed044d1dee185091e7d9 862 PIRSF PIRSF037677 217 846 2.0E-125 T 01-11-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 D3790_19165 91239f551493ed044d1dee185091e7d9 862 PIRSF PIRSF037677 11 196 4.4E-28 T 01-11-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 D3790_19165 91239f551493ed044d1dee185091e7d9 862 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 19 857 0.0 T 01-11-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 D3790_19165 91239f551493ed044d1dee185091e7d9 862 Gene3D G3DSA:3.30.420.110 139 274 1.3E-36 T 01-11-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 D3790_19165 91239f551493ed044d1dee185091e7d9 862 Gene3D G3DSA:3.40.50.300 579 859 7.0E-100 T 01-11-2018 D3790_19165 91239f551493ed044d1dee185091e7d9 862 Pfam PF00488 MutS domain V 619 806 8.0E-88 T 01-11-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 D3790_19165 91239f551493ed044d1dee185091e7d9 862 SMART SM00533 295 600 1.9E-102 T 01-11-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 D3790_19165 91239f551493ed044d1dee185091e7d9 862 SUPERFAMILY SSF52540 576 807 2.72E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_19165 91239f551493ed044d1dee185091e7d9 862 Gene3D G3DSA:1.10.1420.10 396 512 9.8E-106 T 01-11-2018 D3790_19165 91239f551493ed044d1dee185091e7d9 862 Gene3D G3DSA:3.40.1170.10 11 133 2.5E-52 T 01-11-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 D3790_19165 91239f551493ed044d1dee185091e7d9 862 SUPERFAMILY SSF48334 279 575 1.96E-90 T 01-11-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily D3790_19165 91239f551493ed044d1dee185091e7d9 862 SUPERFAMILY SSF55271 13 125 1.44E-42 T 01-11-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 D3790_19165 91239f551493ed044d1dee185091e7d9 862 SUPERFAMILY SSF53150 126 278 3.92E-43 T 01-11-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 D3790_19165 91239f551493ed044d1dee185091e7d9 862 Pfam PF05188 MutS domain II 140 265 3.0E-31 T 01-11-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 D3790_16740 aa111f8775f900d35ef214a5ee4ea2fe 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 2.6E-47 T 01-11-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_16740 aa111f8775f900d35ef214a5ee4ea2fe 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 7.5E-31 T 01-11-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_16740 aa111f8775f900d35ef214a5ee4ea2fe 121 SUPERFAMILY SSF48300 3 57 4.32E-16 T 01-11-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_16740 aa111f8775f900d35ef214a5ee4ea2fe 121 SUPERFAMILY SSF54736 50 121 5.93E-25 T 01-11-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like D3790_16740 aa111f8775f900d35ef214a5ee4ea2fe 121 Gene3D G3DSA:3.30.1390.10 51 121 6.3E-32 T 01-11-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like D3790_16740 aa111f8775f900d35ef214a5ee4ea2fe 121 Gene3D G3DSA:1.20.5.710 2 50 6.0E-25 T 01-11-2018 D3790_16740 aa111f8775f900d35ef214a5ee4ea2fe 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 25.319 T 01-11-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_16740 aa111f8775f900d35ef214a5ee4ea2fe 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 4.0E-25 T 01-11-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_16740 aa111f8775f900d35ef214a5ee4ea2fe 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 48 1.4E-15 T 01-11-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_06475 3ef8cec7259ab9ff767977d286363bb6 324 Pfam PF03466 LysR substrate binding domain 91 288 1.8E-41 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_06475 3ef8cec7259ab9ff767977d286363bb6 324 SUPERFAMILY SSF46785 1 113 3.33E-13 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_06475 3ef8cec7259ab9ff767977d286363bb6 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 2.1E-14 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_06475 3ef8cec7259ab9ff767977d286363bb6 324 Gene3D G3DSA:1.10.10.10 1 86 9.1E-21 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_06475 3ef8cec7259ab9ff767977d286363bb6 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_06475 3ef8cec7259ab9ff767977d286363bb6 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_06475 3ef8cec7259ab9ff767977d286363bb6 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_06475 3ef8cec7259ab9ff767977d286363bb6 324 Gene3D G3DSA:3.40.190.10 93 303 2.5E-97 T 01-11-2018 D3790_06475 3ef8cec7259ab9ff767977d286363bb6 324 SUPERFAMILY SSF53850 91 322 4.5E-43 T 01-11-2018 D3790_06475 3ef8cec7259ab9ff767977d286363bb6 324 Gene3D G3DSA:3.40.190.10 167 267 2.5E-97 T 01-11-2018 D3790_17375 e19a45381a3236bfc635df87c3db3ec4 244 Gene3D G3DSA:1.20.1260.30 1 192 1.9E-49 T 01-11-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily D3790_17375 e19a45381a3236bfc635df87c3db3ec4 244 Gene3D G3DSA:3.40.50.150 196 244 4.9E-7 T 01-11-2018 D3790_17375 e19a45381a3236bfc635df87c3db3ec4 244 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 198 214 2.0E-6 T 01-11-2018 D3790_17375 e19a45381a3236bfc635df87c3db3ec4 244 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 232 244 2.0E-6 T 01-11-2018 D3790_17375 e19a45381a3236bfc635df87c3db3ec4 244 Pfam PF02384 N-6 DNA Methylase 174 243 3.3E-17 T 01-11-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 D3790_17375 e19a45381a3236bfc635df87c3db3ec4 244 Pfam PF12161 HsdM N-terminal domain 9 168 5.7E-28 T 01-11-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain D3790_17375 e19a45381a3236bfc635df87c3db3ec4 244 SUPERFAMILY SSF53335 8 244 2.0E-39 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_09825 0974eaff4ed12c04e167518d2d23e308 440 Pfam PF17193 MukF C-terminal domain 283 440 1.0E-79 T 01-11-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain D3790_09825 0974eaff4ed12c04e167518d2d23e308 440 Pfam PF17192 MukF middle domain 121 281 2.4E-83 T 01-11-2018 IPR033440 Chromosome partition protein MukF, middle domain D3790_09825 0974eaff4ed12c04e167518d2d23e308 440 Gene3D G3DSA:1.10.225.40 353 440 4.7E-41 T 01-11-2018 IPR038198 MukF, C-terminal domain superfamily D3790_09825 0974eaff4ed12c04e167518d2d23e308 440 Gene3D G3DSA:1.10.10.10 24 118 1.1E-50 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_09825 0974eaff4ed12c04e167518d2d23e308 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 54.431 T 01-11-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 D3790_09825 0974eaff4ed12c04e167518d2d23e308 440 SUPERFAMILY SSF46785 8 118 1.18E-48 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_09825 0974eaff4ed12c04e167518d2d23e308 440 Pfam PF03882 MukF winged-helix domain 3 117 6.7E-57 T 01-11-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain D3790_09825 0974eaff4ed12c04e167518d2d23e308 440 PIRSF PIRSF018282 1 440 2.3E-250 T 01-11-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 D3790_09825 0974eaff4ed12c04e167518d2d23e308 440 Gene3D G3DSA:1.20.58.590 119 311 1.0E-87 T 01-11-2018 IPR036141 MukF, middle domain superfamily D3790_09825 0974eaff4ed12c04e167518d2d23e308 440 SUPERFAMILY SSF140570 119 281 5.62E-73 T 01-11-2018 IPR036141 MukF, middle domain superfamily D3790_11405 63ce38fc6b84dd16400ea86fa5825f24 122 Pfam PF10757 Biofilm formation regulator YbaJ 1 115 1.6E-56 T 01-11-2018 IPR019693 Biofilm formation regulator YbaJ D3790_12460 7b00ba5c92246778f8de1ff707975305 306 Pfam PF01548 Transposase 5 151 9.7E-23 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D3790_12460 7b00ba5c92246778f8de1ff707975305 306 Pfam PF02371 Transposase IS116/IS110/IS902 family 200 284 7.9E-20 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D3790_06225 ed80f37e252187385b63dc2ee4732a5d 548 SUPERFAMILY SSF53850 39 530 1.01E-141 T 01-11-2018 D3790_06225 ed80f37e252187385b63dc2ee4732a5d 548 PIRSF PIRSF002741 3 548 2.4E-108 T 01-11-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 D3790_06225 ed80f37e252187385b63dc2ee4732a5d 548 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 468 1.3E-90 T 01-11-2018 IPR000914 Solute-binding protein family 5 domain D3790_06225 ed80f37e252187385b63dc2ee4732a5d 548 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 90 112 - T 01-11-2018 IPR023765 Solute-binding protein family 5, conserved site D3790_06225 ed80f37e252187385b63dc2ee4732a5d 548 Gene3D G3DSA:3.90.76.10 74 198 4.2E-196 T 01-11-2018 D3790_06225 ed80f37e252187385b63dc2ee4732a5d 548 Gene3D G3DSA:3.40.190.10 44 529 4.2E-196 T 01-11-2018 D3790_06225 ed80f37e252187385b63dc2ee4732a5d 548 Gene3D G3DSA:3.10.105.10 301 517 4.2E-196 T 01-11-2018 D3790_01755 982c2e0467e4b5b275902a9ffbdf155c 297 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 32 240 5.3E-64 T 01-11-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class D3790_01755 982c2e0467e4b5b275902a9ffbdf155c 297 Gene3D G3DSA:1.10.3210.40 36 222 7.0E-10 T 01-11-2018 D3790_01755 982c2e0467e4b5b275902a9ffbdf155c 297 Pfam PF07514 Putative helicase 32 240 1.2E-30 T 01-11-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative D3790_08605 a344fffebf1b649ca86a31f170f856a4 229 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_08605 a344fffebf1b649ca86a31f170f856a4 229 Pfam PF08448 PAS fold 19 125 2.6E-9 T 01-11-2018 IPR013656 PAS fold-4 D3790_08605 a344fffebf1b649ca86a31f170f856a4 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.8E-15 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_08605 a344fffebf1b649ca86a31f170f856a4 229 SMART SM00421 148 205 5.3E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_08605 a344fffebf1b649ca86a31f170f856a4 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 1.6E-6 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_08605 a344fffebf1b649ca86a31f170f856a4 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 1.6E-6 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_08605 a344fffebf1b649ca86a31f170f856a4 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 1.6E-6 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_08605 a344fffebf1b649ca86a31f170f856a4 229 SUPERFAMILY SSF46894 143 211 6.46E-18 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D3790_08605 a344fffebf1b649ca86a31f170f856a4 229 Gene3D G3DSA:1.10.10.10 126 213 7.6E-17 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_12330 18152af335487691624f38e45660a150 283 Pfam PF00795 Carbon-nitrogen hydrolase 7 240 1.7E-45 T 01-11-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 D3790_12330 18152af335487691624f38e45660a150 283 SUPERFAMILY SSF56317 3 267 1.57E-69 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D3790_12330 18152af335487691624f38e45660a150 283 Gene3D G3DSA:3.60.110.10 4 271 1.8E-77 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D3790_12330 18152af335487691624f38e45660a150 283 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 154 174 - T 01-11-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site D3790_09185 189d1fc8a48794edf51294b867dd2044 129 Gene3D G3DSA:3.30.420.470 3 118 4.4E-10 T 01-11-2018 D3790_09185 189d1fc8a48794edf51294b867dd2044 129 Pfam PF13358 DDE superfamily endonuclease 4 100 1.4E-21 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_04370 58c220a855584e682d85457e02b3bb38 145 SUPERFAMILY SSF56112 22 134 8.87E-8 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily D3790_04370 58c220a855584e682d85457e02b3bb38 145 Gene3D G3DSA:3.90.1200.10 1 144 1.8E-34 T 01-11-2018 D3790_13080 9281609b8fac2e43b411442ae1ba454f 321 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 270 278 - T 01-11-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 D3790_13080 9281609b8fac2e43b411442ae1ba454f 321 SUPERFAMILY SSF54292 216 321 2.75E-24 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D3790_13080 9281609b8fac2e43b411442ae1ba454f 321 SUPERFAMILY SSF63380 3 104 5.21E-23 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel D3790_13080 9281609b8fac2e43b411442ae1ba454f 321 Gene3D G3DSA:3.40.50.80 106 225 1.2E-23 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3790_13080 9281609b8fac2e43b411442ae1ba454f 321 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 242 312 8.8E-12 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 D3790_13080 9281609b8fac2e43b411442ae1ba454f 321 Pfam PF00175 Oxidoreductase NAD-binding domain 117 168 3.0E-5 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 D3790_13080 9281609b8fac2e43b411442ae1ba454f 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 80 94 7.3E-27 T 01-11-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 D3790_13080 9281609b8fac2e43b411442ae1ba454f 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 141 150 7.3E-27 T 01-11-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 D3790_13080 9281609b8fac2e43b411442ae1ba454f 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 116 135 7.3E-27 T 01-11-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 D3790_13080 9281609b8fac2e43b411442ae1ba454f 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 31 41 7.3E-27 T 01-11-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 D3790_13080 9281609b8fac2e43b411442ae1ba454f 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 94 108 7.3E-27 T 01-11-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 D3790_13080 9281609b8fac2e43b411442ae1ba454f 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 193 201 7.3E-27 T 01-11-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 D3790_13080 9281609b8fac2e43b411442ae1ba454f 321 Gene3D G3DSA:2.40.30.10 3 105 6.2E-24 T 01-11-2018 D3790_13080 9281609b8fac2e43b411442ae1ba454f 321 SUPERFAMILY SSF52343 102 228 6.81E-26 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3790_13080 9281609b8fac2e43b411442ae1ba454f 321 Pfam PF00970 Oxidoreductase FAD-binding domain 10 102 1.9E-5 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 D3790_13080 9281609b8fac2e43b411442ae1ba454f 321 Gene3D G3DSA:3.10.20.30 226 321 5.7E-24 T 01-11-2018 IPR012675 Beta-grasp domain superfamily D3790_13080 9281609b8fac2e43b411442ae1ba454f 321 Hamap MF_02098 Carnitine monooxygenase reductase subunit. 7 321 87.035 T 01-11-2018 IPR039003 Carnitine monooxygenase reductase subunit GO:0009437 D3790_17600 9abc7aa32e5005cc536bae0c5497af3f 374 SUPERFAMILY SSF52540 57 203 1.23E-13 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_17600 9abc7aa32e5005cc536bae0c5497af3f 374 Pfam PF03969 AFG1-like ATPase 5 369 1.4E-146 T 01-11-2018 IPR005654 ATPase, AFG1-like GO:0005524 D3790_17600 9abc7aa32e5005cc536bae0c5497af3f 374 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 374 53.293 T 01-11-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 D3790_17600 9abc7aa32e5005cc536bae0c5497af3f 374 Gene3D G3DSA:3.40.50.300 59 214 8.4E-20 T 01-11-2018 D3790_00975 49072f97b98695ad7d50aa0facdc85b4 358 Gene3D G3DSA:3.20.20.70 2 358 7.1E-151 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_00975 49072f97b98695ad7d50aa0facdc85b4 358 PIRSF PIRSF001359 13 358 6.4E-100 T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 D3790_00975 49072f97b98695ad7d50aa0facdc85b4 358 SUPERFAMILY SSF51569 4 356 3.81E-132 T 01-11-2018 D3790_00975 49072f97b98695ad7d50aa0facdc85b4 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 4.6E-187 T 01-11-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 D3790_00975 49072f97b98695ad7d50aa0facdc85b4 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 2.2E-114 T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 D3790_00975 49072f97b98695ad7d50aa0facdc85b4 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 D3790_00975 49072f97b98695ad7d50aa0facdc85b4 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 D3790_00975 49072f97b98695ad7d50aa0facdc85b4 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 2.3E-90 T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 20 268 1.3E-59 T 01-11-2018 IPR014030 Beta-ketoacyl synthase, N-terminal D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 181 197 - T 01-11-2018 IPR018201 Beta-ketoacyl synthase, active site D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 Gene3D G3DSA:3.30.70.250 658 718 1.2E-105 T 01-11-2018 D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 SUPERFAMILY SSF53901 20 440 2.34E-69 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 Gene3D G3DSA:3.30.70.3290 458 859 1.2E-105 T 01-11-2018 D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 SUPERFAMILY SSF52151 531 813 5.49E-55 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 SUPERFAMILY SSF55048 657 718 2.09E-8 T 01-11-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 277 389 9.0E-36 T 01-11-2018 IPR014031 Beta-ketoacyl synthase, C-terminal D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 SMART SM00825 Beta-ketoacyl synthase 21 444 4.3E-139 T 01-11-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1115 1310 3.1E-27 T 01-11-2018 D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 SUPERFAMILY SSF47336 1379 1454 6.28E-12 T 01-11-2018 IPR036736 ACP-like superfamily D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 Gene3D G3DSA:3.40.50.720 887 1361 8.2E-68 T 01-11-2018 D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 395 507 3.2E-19 T 01-11-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 Pfam PF08659 KR domain 1118 1307 1.7E-33 T 01-11-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 Gene3D G3DSA:1.10.1200.10 1373 1455 3.7E-11 T 01-11-2018 IPR036736 ACP-like superfamily D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 535 828 9.9E-57 T 01-11-2018 IPR020801 Polyketide synthase, acyl transferase domain D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 Gene3D G3DSA:3.40.366.10 531 830 1.2E-105 T 01-11-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 Gene3D G3DSA:3.40.47.10 18 443 3.0E-140 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 Pfam PF00550 Phosphopantetheine attachment site 1386 1445 1.1E-8 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 Pfam PF00698 Acyl transferase domain 533 832 1.8E-41 T 01-11-2018 IPR014043 Acyl transferase D3790_09365 04cd711a9c5f5c9cce8d778bc9b1e5de 1487 SUPERFAMILY SSF51735 1115 1326 1.07E-24 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_05070 2efd8ae55da4835eb5228f17ed115524 215 SUPERFAMILY SSF46689 16 73 2.62E-6 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_05070 2efd8ae55da4835eb5228f17ed115524 215 Gene3D G3DSA:1.10.357.10 5 199 2.8E-7 T 01-11-2018 D3790_05395 7efbd7ac64c7b1ede29ad47dbd887fe9 416 Gene3D G3DSA:2.40.50.100 80 224 1.2E-63 T 01-11-2018 D3790_05395 7efbd7ac64c7b1ede29ad47dbd887fe9 416 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 78 303 1.8E-15 T 01-11-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D3790_05395 7efbd7ac64c7b1ede29ad47dbd887fe9 416 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 56 384 1.0E-72 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D3790_05395 7efbd7ac64c7b1ede29ad47dbd887fe9 416 Gene3D G3DSA:2.40.30.170 74 292 1.2E-63 T 01-11-2018 D3790_05395 7efbd7ac64c7b1ede29ad47dbd887fe9 416 SUPERFAMILY SSF111369 73 308 1.24E-52 T 01-11-2018 D3790_05395 7efbd7ac64c7b1ede29ad47dbd887fe9 416 Gene3D G3DSA:2.40.420.20 293 386 2.0E-19 T 01-11-2018 D3790_05395 7efbd7ac64c7b1ede29ad47dbd887fe9 416 Gene3D G3DSA:1.10.287.470 115 188 1.2E-63 T 01-11-2018 D3790_07565 cbb0dce82f8b5fe6cf91f671a5ce020d 641 Gene3D G3DSA:1.10.8.60 493 572 1.0E-21 T 01-11-2018 D3790_07565 cbb0dce82f8b5fe6cf91f671a5ce020d 641 SMART SM00091 16 84 3.2E-5 T 01-11-2018 IPR000014 PAS domain D3790_07565 cbb0dce82f8b5fe6cf91f671a5ce020d 641 SMART SM00091 162 228 0.0026 T 01-11-2018 IPR000014 PAS domain D3790_07565 cbb0dce82f8b5fe6cf91f671a5ce020d 641 Gene3D G3DSA:3.30.450.20 20 144 2.8E-12 T 01-11-2018 D3790_07565 cbb0dce82f8b5fe6cf91f671a5ce020d 641 Pfam PF13426 PAS domain 30 128 1.9E-5 T 01-11-2018 IPR000014 PAS domain D3790_07565 cbb0dce82f8b5fe6cf91f671a5ce020d 641 Pfam PF13426 PAS domain 173 280 1.2E-11 T 01-11-2018 IPR000014 PAS domain D3790_07565 cbb0dce82f8b5fe6cf91f671a5ce020d 641 SMART SM00382 342 486 4.0E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_07565 cbb0dce82f8b5fe6cf91f671a5ce020d 641 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 535 544 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site D3790_07565 cbb0dce82f8b5fe6cf91f671a5ce020d 641 Gene3D G3DSA:1.10.10.60 593 639 2.7E-6 T 01-11-2018 D3790_07565 cbb0dce82f8b5fe6cf91f671a5ce020d 641 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 131 7.6E-7 T 01-11-2018 IPR000014 PAS domain D3790_07565 cbb0dce82f8b5fe6cf91f671a5ce020d 641 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 167 288 2.5E-14 T 01-11-2018 IPR000014 PAS domain D3790_07565 cbb0dce82f8b5fe6cf91f671a5ce020d 641 Gene3D G3DSA:3.40.50.300 307 492 5.3E-69 T 01-11-2018 D3790_07565 cbb0dce82f8b5fe6cf91f671a5ce020d 641 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 346 359 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3790_07565 cbb0dce82f8b5fe6cf91f671a5ce020d 641 Pfam PF00158 Sigma-54 interaction domain 322 489 5.3E-73 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D3790_07565 cbb0dce82f8b5fe6cf91f671a5ce020d 641 Gene3D G3DSA:3.30.450.20 165 299 3.5E-23 T 01-11-2018 D3790_07565 cbb0dce82f8b5fe6cf91f671a5ce020d 641 SUPERFAMILY SSF55785 173 288 9.07E-21 T 01-11-2018 IPR035965 PAS domain superfamily D3790_07565 cbb0dce82f8b5fe6cf91f671a5ce020d 641 SUPERFAMILY SSF55785 21 127 1.71E-11 T 01-11-2018 IPR035965 PAS domain superfamily D3790_07565 cbb0dce82f8b5fe6cf91f671a5ce020d 641 SUPERFAMILY SSF52540 321 564 1.26E-72 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_07565 cbb0dce82f8b5fe6cf91f671a5ce020d 641 SMART SM00086 240 281 5.1E-4 T 01-11-2018 IPR001610 PAC motif D3790_08360 b27ee3692fae21af99bfa74f21d46e4a 327 SUPERFAMILY SSF46589 14 99 9.94E-22 T 01-11-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 D3790_08360 b27ee3692fae21af99bfa74f21d46e4a 327 Gene3D G3DSA:3.30.930.10 8 327 9.6E-123 T 01-11-2018 D3790_08360 b27ee3692fae21af99bfa74f21d46e4a 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 1.5E-24 T 01-11-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 D3790_08360 b27ee3692fae21af99bfa74f21d46e4a 327 SUPERFAMILY SSF55681 91 327 7.28E-81 T 01-11-2018 D3790_08360 b27ee3692fae21af99bfa74f21d46e4a 327 Pfam PF01409 tRNA synthetases class II core domain (F) 91 326 2.5E-107 T 01-11-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 D3790_08360 b27ee3692fae21af99bfa74f21d46e4a 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.154 T 01-11-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 D3790_08360 b27ee3692fae21af99bfa74f21d46e4a 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 1.0E-116 T 01-11-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 D3790_16135 ad3acbb836744f5d8a768939fa18135f 152 Gene3D G3DSA:2.130.10.30 44 148 1.3E-5 T 01-11-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II D3790_16135 ad3acbb836744f5d8a768939fa18135f 152 SUPERFAMILY SSF50985 14 133 5.89E-8 T 01-11-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II D3790_03590 c61f91b14929649dd402c2bc824ff2b9 935 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 149 233 5.5E-15 T 01-11-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 D3790_03590 c61f91b14929649dd402c2bc824ff2b9 935 Gene3D G3DSA:3.20.20.80 248 826 2.5E-185 T 01-11-2018 D3790_03590 c61f91b14929649dd402c2bc824ff2b9 935 SUPERFAMILY SSF51011 818 933 1.08E-27 T 01-11-2018 D3790_03590 c61f91b14929649dd402c2bc824ff2b9 935 SUPERFAMILY SSF81296 149 251 3.8E-24 T 01-11-2018 IPR014756 Immunoglobulin E-set D3790_03590 c61f91b14929649dd402c2bc824ff2b9 935 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 26 922 0.0 T 01-11-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 D3790_03590 c61f91b14929649dd402c2bc824ff2b9 935 SUPERFAMILY SSF81296 22 138 3.08E-31 T 01-11-2018 IPR014756 Immunoglobulin E-set D3790_03590 c61f91b14929649dd402c2bc824ff2b9 935 Pfam PF11852 Domain of unknown function (DUF3372) 757 920 3.2E-46 T 01-11-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal D3790_03590 c61f91b14929649dd402c2bc824ff2b9 935 Gene3D G3DSA:2.60.40.10 140 247 8.2E-29 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_03590 c61f91b14929649dd402c2bc824ff2b9 935 Gene3D G3DSA:2.60.40.1130 25 139 2.2E-36 T 01-11-2018 D3790_03590 c61f91b14929649dd402c2bc824ff2b9 935 SUPERFAMILY SSF51445 245 816 1.93E-131 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily D3790_03590 c61f91b14929649dd402c2bc824ff2b9 935 Gene3D G3DSA:2.60.40.1180 827 935 1.0E-29 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta D3790_09300 dff8a352b47bfd9e9d218ea39168c59d 454 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 451 2.3E-196 T 01-11-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D3790_09300 dff8a352b47bfd9e9d218ea39168c59d 454 SUPERFAMILY SSF52540 108 378 7.28E-93 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09300 dff8a352b47bfd9e9d218ea39168c59d 454 SMART SM00382 173 356 4.3E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_09300 dff8a352b47bfd9e9d218ea39168c59d 454 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 161 372 1.5E-71 T 01-11-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D3790_09300 dff8a352b47bfd9e9d218ea39168c59d 454 Gene3D G3DSA:3.40.50.12240 20 454 4.5E-165 T 01-11-2018 D3790_09300 dff8a352b47bfd9e9d218ea39168c59d 454 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 8 452 3.3E-188 T 01-11-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D3790_09300 dff8a352b47bfd9e9d218ea39168c59d 454 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 363 372 - T 01-11-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D3790_03585 d4dc6bd833b12e43a5bbd94857c156fb 382 Gene3D G3DSA:3.40.640.10 3 242 4.1E-61 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_03585 d4dc6bd833b12e43a5bbd94857c156fb 382 Gene3D G3DSA:3.90.1150.10 247 382 7.3E-8 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_03585 d4dc6bd833b12e43a5bbd94857c156fb 382 SUPERFAMILY SSF53383 15 365 2.48E-67 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_03585 d4dc6bd833b12e43a5bbd94857c156fb 382 PIRSF PIRSF000390 3 381 8.5E-64 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase D3790_03585 d4dc6bd833b12e43a5bbd94857c156fb 382 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 22 369 1.2E-61 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase D3790_03645 865b6bf0a7e51e8973292bd6449cfe41 256 SMART SM00342 169 251 3.2E-19 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D3790_03645 865b6bf0a7e51e8973292bd6449cfe41 256 Gene3D G3DSA:2.60.120.10 5 91 1.7E-5 T 01-11-2018 IPR014710 RmlC-like jelly roll fold D3790_03645 865b6bf0a7e51e8973292bd6449cfe41 256 SUPERFAMILY SSF51182 11 156 2.0E-10 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily D3790_03645 865b6bf0a7e51e8973292bd6449cfe41 256 Pfam PF12833 Helix-turn-helix domain 175 251 9.7E-19 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D3790_03645 865b6bf0a7e51e8973292bd6449cfe41 256 Pfam PF02311 AraC-like ligand binding domain 17 119 1.3E-6 T 01-11-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 D3790_03645 865b6bf0a7e51e8973292bd6449cfe41 256 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 206 247 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 D3790_03645 865b6bf0a7e51e8973292bd6449cfe41 256 Gene3D G3DSA:1.10.10.60 159 252 3.8E-19 T 01-11-2018 D3790_03645 865b6bf0a7e51e8973292bd6449cfe41 256 SUPERFAMILY SSF46689 205 252 6.72E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_12680 16f310b50ce5098aebddd7b2e2ad7027 555 Pfam PF12848 ABC transporter 230 306 2.2E-12 T 01-11-2018 IPR032781 ABC-transporter extension domain D3790_12680 16f310b50ce5098aebddd7b2e2ad7027 555 Gene3D G3DSA:3.40.50.300 2 285 5.7E-89 T 01-11-2018 D3790_12680 16f310b50ce5098aebddd7b2e2ad7027 555 Pfam PF00005 ABC transporter 340 473 2.4E-22 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_12680 16f310b50ce5098aebddd7b2e2ad7027 555 Pfam PF00005 ABC transporter 22 191 2.1E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_12680 16f310b50ce5098aebddd7b2e2ad7027 555 Gene3D G3DSA:3.40.50.300 286 555 4.5E-77 T 01-11-2018 D3790_12680 16f310b50ce5098aebddd7b2e2ad7027 555 SMART SM00382 348 522 4.2E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_12680 16f310b50ce5098aebddd7b2e2ad7027 555 SMART SM00382 31 236 3.7E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_12680 16f310b50ce5098aebddd7b2e2ad7027 555 SUPERFAMILY SSF52540 12 243 1.24E-48 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_12680 16f310b50ce5098aebddd7b2e2ad7027 555 SUPERFAMILY SSF52540 302 533 1.1E-46 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_12680 16f310b50ce5098aebddd7b2e2ad7027 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_12680 16f310b50ce5098aebddd7b2e2ad7027 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 1.1E-295 T 01-11-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 D3790_15175 af447c46f1c0447eb95f41893fefa71a 292 SUPERFAMILY SSF46785 169 228 7.54E-5 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_15175 af447c46f1c0447eb95f41893fefa71a 292 Pfam PF09106 Elongation factor SelB, winged helix 105 161 4.4E-17 T 01-11-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 D3790_15175 af447c46f1c0447eb95f41893fefa71a 292 Gene3D G3DSA:1.10.10.10 228 288 1.9E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_15175 af447c46f1c0447eb95f41893fefa71a 292 Pfam PF09107 Elongation factor SelB, winged helix 241 286 9.0E-17 T 01-11-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 D3790_15175 af447c46f1c0447eb95f41893fefa71a 292 Gene3D G3DSA:1.10.10.10 168 227 1.9E-26 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_15175 af447c46f1c0447eb95f41893fefa71a 292 SUPERFAMILY SSF46785 101 164 1.74E-14 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_15175 af447c46f1c0447eb95f41893fefa71a 292 SUPERFAMILY SSF46785 231 288 2.18E-11 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 Gene3D G3DSA:3.90.740.10 227 414 0.0 T 01-11-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 Gene3D G3DSA:3.10.20.590 799 860 4.0E-24 T 01-11-2018 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 Gene3D G3DSA:3.10.330.110 567 628 0.0 T 01-11-2018 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.235 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 Pfam PF08264 Anticodon-binding domain of tRNA 700 823 1.1E-16 T 01-11-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 SUPERFAMILY SSF50677 226 415 3.56E-56 T 01-11-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 171 1.4E-26 T 01-11-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 650 6.3E-7 T 01-11-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 572 2.3E-6 T 01-11-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 7.9E-77 T 01-11-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 SUPERFAMILY SSF47323 662 859 3.55E-35 T 01-11-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 Gene3D G3DSA:1.10.730.10 8 791 0.0 T 01-11-2018 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 2.5E-51 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 2.5E-51 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 2.5E-51 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 2.5E-51 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 2.5E-51 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 2.5E-51 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 2.5E-51 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 Gene3D G3DSA:3.40.50.620 33 566 0.0 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 SUPERFAMILY SSF52374 5 668 4.02E-140 T 01-11-2018 D3790_03260 4a5b32cd58e1942ede494a2d18dae31e 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D3790_17620 e6d7307ee4649e5644ea36939d358a7c 161 PIRSF PIRSF005276 3 161 3.9E-60 T 01-11-2018 IPR007481 Stringent starvation protein B D3790_17620 e6d7307ee4649e5644ea36939d358a7c 161 SUPERFAMILY SSF101738 3 117 8.37E-49 T 01-11-2018 IPR036760 SspB-like superfamily D3790_17620 e6d7307ee4649e5644ea36939d358a7c 161 Gene3D G3DSA:2.30.30.220 2 129 6.8E-53 T 01-11-2018 IPR036760 SspB-like superfamily D3790_17620 e6d7307ee4649e5644ea36939d358a7c 161 Pfam PF04386 Stringent starvation protein B 9 161 5.1E-43 T 01-11-2018 IPR007481 Stringent starvation protein B D3790_00940 f637c2b8541b1deab673a58aafc78270 446 PIRSF PIRSF006603 2 446 5.4E-77 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D3790_00940 f637c2b8541b1deab673a58aafc78270 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 416 7.9E-62 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D3790_00940 f637c2b8541b1deab673a58aafc78270 446 Pfam PF01554 MatE 17 177 1.5E-27 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D3790_00940 f637c2b8541b1deab673a58aafc78270 446 Pfam PF01554 MatE 242 403 5.7E-27 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D3790_03835 838b0c72ecfb63e6acb58304d1d0360e 206 Gene3D G3DSA:3.40.50.150 5 194 3.6E-28 T 01-11-2018 D3790_03835 838b0c72ecfb63e6acb58304d1d0360e 206 SUPERFAMILY SSF53335 24 183 9.81E-29 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_03835 838b0c72ecfb63e6acb58304d1d0360e 206 Pfam PF13649 Methyltransferase domain 41 134 2.6E-14 T 01-11-2018 D3790_13945 3c6ef8899bfe82c977c5b5f8703966ee 427 SUPERFAMILY SSF52540 84 363 3.54E-70 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_13945 3c6ef8899bfe82c977c5b5f8703966ee 427 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.168 T 01-11-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 D3790_13945 3c6ef8899bfe82c977c5b5f8703966ee 427 Pfam PF00271 Helicase conserved C-terminal domain 243 351 1.1E-28 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_13945 3c6ef8899bfe82c977c5b5f8703966ee 427 SMART SM00490 270 351 2.0E-29 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_13945 3c6ef8899bfe82c977c5b5f8703966ee 427 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 01-11-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D3790_13945 3c6ef8899bfe82c977c5b5f8703966ee 427 Gene3D G3DSA:3.40.50.300 228 397 3.0E-45 T 01-11-2018 D3790_13945 3c6ef8899bfe82c977c5b5f8703966ee 427 SMART SM00487 28 234 6.8E-52 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_13945 3c6ef8899bfe82c977c5b5f8703966ee 427 Gene3D G3DSA:3.40.50.300 2 222 4.8E-68 T 01-11-2018 D3790_13945 3c6ef8899bfe82c977c5b5f8703966ee 427 Pfam PF00270 DEAD/DEAH box helicase 33 206 8.2E-45 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D3790_10490 570078195fe95695de21a17c7fc426e6 243 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 29 241 27.366 T 01-11-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 D3790_10490 570078195fe95695de21a17c7fc426e6 243 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 30 235 3.3E-53 T 01-11-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 D3790_10490 570078195fe95695de21a17c7fc426e6 243 Gene3D G3DSA:1.10.1760.20 29 239 6.8E-54 T 01-11-2018 D3790_10490 570078195fe95695de21a17c7fc426e6 243 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 29 237 1.9E-102 T 01-11-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 D3790_17645 48cf345004bac39442883b50b857562e 777 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 346 3.0E-14 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_17645 48cf345004bac39442883b50b857562e 777 SMART SM00073 674 771 7.5E-14 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D3790_17645 48cf345004bac39442883b50b857562e 777 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 276 2.4E-14 T 01-11-2018 IPR000014 PAS domain D3790_17645 48cf345004bac39442883b50b857562e 777 Gene3D G3DSA:3.30.565.10 348 508 4.0E-43 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_17645 48cf345004bac39442883b50b857562e 777 Gene3D G3DSA:3.40.50.2300 509 640 9.4E-31 T 01-11-2018 D3790_17645 48cf345004bac39442883b50b857562e 777 SMART SM00091 155 221 1.4E-4 T 01-11-2018 IPR000014 PAS domain D3790_17645 48cf345004bac39442883b50b857562e 777 SMART SM00387 394 507 6.3E-34 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_17645 48cf345004bac39442883b50b857562e 777 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 504 1.6E-29 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_17645 48cf345004bac39442883b50b857562e 777 SUPERFAMILY SSF55874 336 503 1.09E-41 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_17645 48cf345004bac39442883b50b857562e 777 SMART SM00448 526 637 1.7E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_17645 48cf345004bac39442883b50b857562e 777 SUPERFAMILY SSF47384 269 347 3.73E-16 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D3790_17645 48cf345004bac39442883b50b857562e 777 SUPERFAMILY SSF52172 526 673 6.26E-29 T 01-11-2018 IPR011006 CheY-like superfamily D3790_17645 48cf345004bac39442883b50b857562e 777 Gene3D G3DSA:1.10.287.130 268 345 3.7E-20 T 01-11-2018 D3790_17645 48cf345004bac39442883b50b857562e 777 Gene3D G3DSA:1.10.287.970 1 89 1.7E-37 T 01-11-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily D3790_17645 48cf345004bac39442883b50b857562e 777 SUPERFAMILY SSF55785 143 267 1.47E-19 T 01-11-2018 IPR035965 PAS domain superfamily D3790_17645 48cf345004bac39442883b50b857562e 777 Gene3D G3DSA:1.20.120.160 655 777 7.2E-30 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 D3790_17645 48cf345004bac39442883b50b857562e 777 PIRSF PIRSF003182 1 777 0.0 T 01-11-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 D3790_17645 48cf345004bac39442883b50b857562e 777 Pfam PF00072 Response regulator receiver domain 528 637 5.5E-22 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_17645 48cf345004bac39442883b50b857562e 777 SUPERFAMILY SSF47226 660 772 5.23E-30 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 D3790_17645 48cf345004bac39442883b50b857562e 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 4.7E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_17645 48cf345004bac39442883b50b857562e 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 4.7E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_17645 48cf345004bac39442883b50b857562e 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 4.7E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_17645 48cf345004bac39442883b50b857562e 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 4.7E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_17645 48cf345004bac39442883b50b857562e 777 Pfam PF08448 PAS fold 161 271 4.6E-16 T 01-11-2018 IPR013656 PAS fold-4 D3790_17645 48cf345004bac39442883b50b857562e 777 Pfam PF01627 Hpt domain 685 759 3.7E-13 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D3790_17645 48cf345004bac39442883b50b857562e 777 Gene3D G3DSA:3.30.450.20 152 267 8.9E-18 T 01-11-2018 D3790_17645 48cf345004bac39442883b50b857562e 777 SMART SM00388 282 347 2.3E-17 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_18955 c03f4f39bb290aec95e6b592b7e7a691 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 01-11-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 D3790_18955 c03f4f39bb290aec95e6b592b7e7a691 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 7.6E-86 T 01-11-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 D3790_18955 c03f4f39bb290aec95e6b592b7e7a691 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 01-11-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 D3790_18955 c03f4f39bb290aec95e6b592b7e7a691 251 SUPERFAMILY SSF53335 18 248 1.08E-50 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_18955 c03f4f39bb290aec95e6b592b7e7a691 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 38.724 T 01-11-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 D3790_18955 c03f4f39bb290aec95e6b592b7e7a691 251 Gene3D G3DSA:3.40.50.150 31 251 7.0E-74 T 01-11-2018 D3790_18955 c03f4f39bb290aec95e6b592b7e7a691 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 17 250 2.3E-103 T 01-11-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 D3790_15970 ec72a32aee73127b384cf9b3ebb0993f 557 Pfam PF17287 POTRA domain 154 204 2.6E-15 T 01-11-2018 IPR035251 ShlB, POTRA domain D3790_15970 ec72a32aee73127b384cf9b3ebb0993f 557 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 209 517 4.2E-97 T 01-11-2018 IPR005565 Haemolysin activator HlyB, C-terminal D3790_15970 ec72a32aee73127b384cf9b3ebb0993f 557 Gene3D G3DSA:3.10.20.310 80 155 1.8E-8 T 01-11-2018 D3790_15970 ec72a32aee73127b384cf9b3ebb0993f 557 Pfam PF08479 POTRA domain, ShlB-type 80 152 7.8E-21 T 01-11-2018 IPR013686 Polypeptide-transport-associated, ShlB-type D3790_15970 ec72a32aee73127b384cf9b3ebb0993f 557 Gene3D G3DSA:2.40.160.50 181 547 1.4E-68 T 01-11-2018 D3790_15970 ec72a32aee73127b384cf9b3ebb0993f 557 PIRSF PIRSF029745 1 557 3.9E-120 T 01-11-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 D3790_06775 102c78e48ea4611707d8114a4f9a0547 542 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 14 272 1.8E-29 T 01-11-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 D3790_06775 102c78e48ea4611707d8114a4f9a0547 542 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 15 540 1.4E-224 T 01-11-2018 IPR006003 FGGY carbohydrate kinase, pentulose kinase GO:0005975|GO:0016773 D3790_06775 102c78e48ea4611707d8114a4f9a0547 542 Gene3D G3DSA:3.30.420.460 327 518 3.9E-170 T 01-11-2018 D3790_06775 102c78e48ea4611707d8114a4f9a0547 542 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 285 492 7.7E-49 T 01-11-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 D3790_06775 102c78e48ea4611707d8114a4f9a0547 542 SUPERFAMILY SSF53067 284 538 6.12E-52 T 01-11-2018 D3790_06775 102c78e48ea4611707d8114a4f9a0547 542 PIRSF PIRSF000538 12 542 7.9E-75 T 01-11-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 D3790_06775 102c78e48ea4611707d8114a4f9a0547 542 Gene3D G3DSA:3.30.420.40 15 517 3.9E-170 T 01-11-2018 D3790_06775 102c78e48ea4611707d8114a4f9a0547 542 SUPERFAMILY SSF53067 14 273 2.85E-58 T 01-11-2018 D3790_12630 940e2b8a0a7c034ce8ecc2436eddbd94 824 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 665 687 - T 01-11-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 D3790_12630 940e2b8a0a7c034ce8ecc2436eddbd94 824 Gene3D G3DSA:3.30.360.10 630 800 1.1E-118 T 01-11-2018 D3790_12630 940e2b8a0a7c034ce8ecc2436eddbd94 824 Gene3D G3DSA:3.40.50.720 471 816 1.1E-118 T 01-11-2018 D3790_12630 940e2b8a0a7c034ce8ecc2436eddbd94 824 Pfam PF00696 Amino acid kinase family 2 284 2.6E-44 T 01-11-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D3790_12630 940e2b8a0a7c034ce8ecc2436eddbd94 824 PIRSF PIRSF000727 1 822 0.0 T 01-11-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D3790_12630 940e2b8a0a7c034ce8ecc2436eddbd94 824 Pfam PF13840 ACT domain 399 459 3.0E-7 T 01-11-2018 IPR027795 CASTOR, ACT domain D3790_12630 940e2b8a0a7c034ce8ecc2436eddbd94 824 Pfam PF13840 ACT domain 318 380 1.1E-9 T 01-11-2018 IPR027795 CASTOR, ACT domain D3790_12630 940e2b8a0a7c034ce8ecc2436eddbd94 824 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 01-11-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D3790_12630 940e2b8a0a7c034ce8ecc2436eddbd94 824 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 477 610 1.4E-28 T 01-11-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 D3790_12630 940e2b8a0a7c034ce8ecc2436eddbd94 824 SUPERFAMILY SSF55347 619 802 1.18E-50 T 01-11-2018 D3790_12630 940e2b8a0a7c034ce8ecc2436eddbd94 824 SUPERFAMILY SSF55021 388 481 1.15E-22 T 01-11-2018 D3790_12630 940e2b8a0a7c034ce8ecc2436eddbd94 824 Gene3D G3DSA:3.30.2130.10 307 468 5.3E-49 T 01-11-2018 D3790_12630 940e2b8a0a7c034ce8ecc2436eddbd94 824 SUPERFAMILY SSF53633 1 297 8.25E-74 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily D3790_12630 940e2b8a0a7c034ce8ecc2436eddbd94 824 Gene3D G3DSA:3.40.1160.10 3 295 8.1E-84 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily D3790_12630 940e2b8a0a7c034ce8ecc2436eddbd94 824 SUPERFAMILY SSF55021 308 386 2.81E-23 T 01-11-2018 D3790_12630 940e2b8a0a7c034ce8ecc2436eddbd94 824 SUPERFAMILY SSF51735 469 641 1.32E-37 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_12630 940e2b8a0a7c034ce8ecc2436eddbd94 824 Pfam PF00742 Homoserine dehydrogenase 619 815 8.4E-47 T 01-11-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 D3790_12630 940e2b8a0a7c034ce8ecc2436eddbd94 824 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 465 1.4E-141 T 01-11-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D3790_12630 940e2b8a0a7c034ce8ecc2436eddbd94 824 Gene3D G3DSA:1.20.120.1320 41 142 8.1E-84 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.30.559.30 4558 4803 2.6E-156 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF52777 4561 4826 4.67E-66 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF00501 AMP-binding enzyme 2685 3103 2.1E-99 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF00501 AMP-binding enzyme 4839 5241 2.5E-103 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF00501 AMP-binding enzyme 505 903 3.9E-106 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF00501 AMP-binding enzyme 1569 1986 5.1E-101 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF00501 AMP-binding enzyme 3764 4178 1.9E-96 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF52777 35 240 4.45E-48 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF56801 466 1031 9.03E-165 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.30.559.30 1288 1533 1.3E-156 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF52777 3487 3748 1.78E-63 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.30.300.30 897 1007 5.9E-33 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.30.300.30 5235 5344 3.8E-33 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 SMART SM00823 Phosphopantetheine attachment site 4288 4357 0.021 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_07885 29079f28060529e3743601ffc1937108 5999 SMART SM00823 Phosphopantetheine attachment site 1018 1087 0.058 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_07885 29079f28060529e3743601ffc1937108 5999 SMART SM00823 Phosphopantetheine attachment site 3213 3282 0.014 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_07885 29079f28060529e3743601ffc1937108 5999 SMART SM00823 Phosphopantetheine attachment site 5356 5424 0.016 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF52777 3293 3499 1.03E-48 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:1.10.1200.10 4278 4361 4.7E-24 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:1.10.1200.10 1008 1091 2.7E-24 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:1.10.1200.10 3203 3283 2.0E-24 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF52777 1098 1304 1.89E-50 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.30.559.30 3483 3728 1.5E-153 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 ProSitePatterns PS00455 Putative AMP-binding domain signature. 649 660 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07885 29079f28060529e3743601ffc1937108 5999 SMART SM00824 Thioesterase 5736 5980 1.0E-5 T 01-11-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF56801 4800 5369 4.58E-164 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF52777 228 491 5.34E-63 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3915 3926 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07885 29079f28060529e3743601ffc1937108 5999 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2846 2857 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF47336 5348 5420 5.23E-18 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:1.10.1200.10 5345 5425 2.5E-23 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:1.10.1200.10 2090 2174 9.5E-20 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF56801 1530 2114 2.62E-156 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.30.559.10 2224 2595 1.2E-81 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF56801 2643 3226 8.11E-159 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2125 2140 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF53474 5716 5987 1.84E-49 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_07885 29079f28060529e3743601ffc1937108 5999 ProSitePatterns PS00455 Putative AMP-binding domain signature. 4983 4994 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF00975 Thioesterase domain 5446 5699 6.7E-33 T 01-11-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF00975 Thioesterase domain 5734 5972 8.1E-27 T 01-11-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF52777 2217 2421 7.34E-27 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF47336 4280 4353 9.55E-18 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07885 29079f28060529e3743601ffc1937108 5999 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1042 1057 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF47336 3205 3278 9.03E-18 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.40.50.12780 1559 1978 1.5E-133 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.40.50.12780 2675 3095 6.4E-135 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.40.50.12780 4829 5233 2.9E-149 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.40.50.12780 495 895 1.1E-146 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.40.50.12780 3753 4170 3.0E-135 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1728 1739 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF52777 1291 1556 4.67E-66 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.30.559.30 224 468 2.4E-153 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF52777 2409 2672 1.89E-45 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3785 4202 2.5E-130 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_07885 29079f28060529e3743601ffc1937108 5999 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 526 927 1.0E-141 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_07885 29079f28060529e3743601ffc1937108 5999 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4860 5265 9.0E-138 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_07885 29079f28060529e3743601ffc1937108 5999 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2721 3127 1.2E-129 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_07885 29079f28060529e3743601ffc1937108 5999 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1590 2010 7.6E-134 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.30.559.10 40 414 2.4E-153 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF52777 4368 4574 2.22E-50 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.30.559.10 1104 1478 1.3E-156 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07885 29079f28060529e3743601ffc1937108 5999 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3237 3252 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.30.559.10 4374 4748 2.6E-156 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07885 29079f28060529e3743601ffc1937108 5999 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4312 4327 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF47336 2093 2165 1.11E-15 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.30.300.30 3098 3202 6.8E-35 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.30.300.30 4173 4277 4.9E-33 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.30.559.30 2407 2661 1.2E-81 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF13193 AMP-binding enzyme C-terminal domain 5249 5329 1.1E-9 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF13193 AMP-binding enzyme C-terminal domain 911 991 5.1E-9 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF13193 AMP-binding enzyme C-terminal domain 4186 4261 7.1E-11 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF13193 AMP-binding enzyme C-terminal domain 1994 2074 2.3E-10 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF13193 AMP-binding enzyme C-terminal domain 3111 3186 3.9E-12 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF00550 Phosphopantetheine attachment site 4291 4352 7.4E-11 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF00550 Phosphopantetheine attachment site 1021 1082 3.5E-10 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF00550 Phosphopantetheine attachment site 5359 5414 1.1E-9 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF00550 Phosphopantetheine attachment site 3215 3276 5.5E-10 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF00550 Phosphopantetheine attachment site 2103 2164 5.8E-8 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07885 29079f28060529e3743601ffc1937108 5999 ProSitePatterns PS00012 Phosphopantetheine attachment site. 5380 5395 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF56801 3726 4301 1.27E-155 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.40.50.1820 5431 5711 3.5E-53 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF53474 5432 5713 1.68E-51 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.30.559.10 3299 3673 1.5E-153 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07885 29079f28060529e3743601ffc1937108 5999 SUPERFAMILY SSF47336 1010 1083 1.27E-17 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.30.300.30 1980 2089 5.8E-33 T 01-11-2018 D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF00668 Condensation domain 39 485 2.4E-113 T 01-11-2018 IPR001242 Condensation domain D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF00668 Condensation domain 2218 2665 1.4E-48 T 01-11-2018 IPR001242 Condensation domain D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF00668 Condensation domain 3297 3744 4.5E-109 T 01-11-2018 IPR001242 Condensation domain D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF00668 Condensation domain 4372 4819 8.8E-112 T 01-11-2018 IPR001242 Condensation domain D3790_07885 29079f28060529e3743601ffc1937108 5999 Pfam PF00668 Condensation domain 1102 1549 6.9E-112 T 01-11-2018 IPR001242 Condensation domain D3790_07885 29079f28060529e3743601ffc1937108 5999 Gene3D G3DSA:3.40.50.1820 5723 5992 2.1E-52 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_01365 2b6c0b2966a7c4eb3bb564a24ee8d840 382 Gene3D G3DSA:2.40.110.10 111 197 2.1E-17 T 01-11-2018 D3790_01365 2b6c0b2966a7c4eb3bb564a24ee8d840 382 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 228 356 4.4E-11 T 01-11-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain D3790_01365 2b6c0b2966a7c4eb3bb564a24ee8d840 382 SUPERFAMILY SSF47203 224 357 9.54E-5 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 D3790_01365 2b6c0b2966a7c4eb3bb564a24ee8d840 382 Gene3D G3DSA:1.20.140.10 204 381 2.3E-17 T 01-11-2018 D3790_01365 2b6c0b2966a7c4eb3bb564a24ee8d840 382 SUPERFAMILY SSF56645 54 194 2.75E-14 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 D3790_01365 2b6c0b2966a7c4eb3bb564a24ee8d840 382 PIRSF PIRSF016578 47 380 1.7E-44 T 01-11-2018 D3790_17690 8e916526f7d33f063dfc187111379500 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 8.8E-29 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 D3790_17690 8e916526f7d33f063dfc187111379500 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 286 2.0E-109 T 01-11-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 D3790_17690 8e916526f7d33f063dfc187111379500 287 Gene3D G3DSA:3.40.1010.10 1 120 1.1E-46 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 D3790_17690 8e916526f7d33f063dfc187111379500 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.254 T 01-11-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 D3790_17690 8e916526f7d33f063dfc187111379500 287 PIRSF PIRSF005917 2 287 2.5E-108 T 01-11-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 D3790_17690 8e916526f7d33f063dfc187111379500 287 Gene3D G3DSA:3.30.950.10 121 241 3.9E-43 T 01-11-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 D3790_17690 8e916526f7d33f063dfc187111379500 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 01-11-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 D3790_17690 8e916526f7d33f063dfc187111379500 287 SUPERFAMILY SSF53790 12 232 1.3E-84 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 D3790_07005 7452bba6b853e20909e6cfb2ed1f9f9f 491 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 73 78 - T 01-11-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 D3790_07005 7452bba6b853e20909e6cfb2ed1f9f9f 491 Gene3D G3DSA:2.40.10.10 149 236 8.6E-8 T 01-11-2018 D3790_07005 7452bba6b853e20909e6cfb2ed1f9f9f 491 Pfam PF13365 Trypsin-like peptidase domain 57 234 3.9E-9 T 01-11-2018 D3790_07005 7452bba6b853e20909e6cfb2ed1f9f9f 491 Gene3D G3DSA:2.40.10.10 41 148 8.6E-8 T 01-11-2018 D3790_07005 7452bba6b853e20909e6cfb2ed1f9f9f 491 SUPERFAMILY SSF50494 6 275 6.55E-18 T 01-11-2018 IPR009003 Peptidase S1, PA clan D3790_15030 70a62eb5bd402a677af0302d41998412 449 Gene3D G3DSA:3.20.20.370 207 442 3.3E-12 T 01-11-2018 D3790_15030 70a62eb5bd402a677af0302d41998412 449 SUPERFAMILY SSF88713 233 383 3.11E-11 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 D3790_08100 63e66beecea7095d83405927b3a5a011 423 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 220 232 3.3E-31 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 D3790_08100 63e66beecea7095d83405927b3a5a011 423 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 166 181 3.3E-31 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 D3790_08100 63e66beecea7095d83405927b3a5a011 423 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 187 209 3.3E-31 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 D3790_08100 63e66beecea7095d83405927b3a5a011 423 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 3.3E-31 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 D3790_08100 63e66beecea7095d83405927b3a5a011 423 Pfam PF00579 tRNA synthetases class I (W and Y) 31 327 1.1E-88 T 01-11-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_08100 63e66beecea7095d83405927b3a5a011 423 Gene3D G3DSA:1.10.240.10 227 329 9.9E-37 T 01-11-2018 D3790_08100 63e66beecea7095d83405927b3a5a011 423 Gene3D G3DSA:3.40.50.620 1 226 1.7E-92 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_08100 63e66beecea7095d83405927b3a5a011 423 Pfam PF01479 S4 domain 358 396 2.5E-5 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_08100 63e66beecea7095d83405927b3a5a011 423 SUPERFAMILY SSF55174 326 422 4.19E-20 T 01-11-2018 D3790_08100 63e66beecea7095d83405927b3a5a011 423 SUPERFAMILY SSF52374 4 327 4.76E-107 T 01-11-2018 D3790_08100 63e66beecea7095d83405927b3a5a011 423 SMART SM00363 356 418 1.3E-4 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_08100 63e66beecea7095d83405927b3a5a011 423 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_08100 63e66beecea7095d83405927b3a5a011 423 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 423 2.7E-140 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 D3790_08100 63e66beecea7095d83405927b3a5a011 423 Gene3D G3DSA:3.10.290.10 330 423 3.6E-27 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D3790_08100 63e66beecea7095d83405927b3a5a011 423 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 422 45.764 T 01-11-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 D3790_15730 4e4df9ef2a1ac9199b595935738a8ca4 690 Pfam PF01575 MaoC like domain 542 645 2.5E-29 T 01-11-2018 IPR002539 MaoC-like dehydratase domain D3790_15730 4e4df9ef2a1ac9199b595935738a8ca4 690 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 4 681 0.0 T 01-11-2018 IPR011966 Phenylacetic acid degradation protein PaaN KEGG: 00360+3.3.2.12+1.2.1.91 D3790_15730 4e4df9ef2a1ac9199b595935738a8ca4 690 Gene3D G3DSA:3.40.309.10 259 478 5.9E-153 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D3790_15730 4e4df9ef2a1ac9199b595935738a8ca4 690 Gene3D G3DSA:3.10.129.10 530 682 7.6E-42 T 01-11-2018 D3790_15730 4e4df9ef2a1ac9199b595935738a8ca4 690 Gene3D G3DSA:3.40.605.10 10 490 5.9E-153 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D3790_15730 4e4df9ef2a1ac9199b595935738a8ca4 690 SUPERFAMILY SSF54637 532 681 1.05E-32 T 01-11-2018 IPR029069 HotDog domain superfamily D3790_15730 4e4df9ef2a1ac9199b595935738a8ca4 690 SUPERFAMILY SSF53720 4 507 4.32E-82 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D3790_15730 4e4df9ef2a1ac9199b595935738a8ca4 690 Pfam PF00171 Aldehyde dehydrogenase family 12 502 1.3E-62 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D3790_00795 e1c29809dd04811dc1562f8130879b63 278 Pfam PF11920 Protein of unknown function (DUF3438) 17 271 8.9E-109 T 01-11-2018 IPR021844 Integrating conjugative element protein, PFL4704 D3790_00795 e1c29809dd04811dc1562f8130879b63 278 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 20 262 8.7E-101 T 01-11-2018 IPR021844 Integrating conjugative element protein, PFL4704 D3790_00340 e1c29809dd04811dc1562f8130879b63 278 Pfam PF11920 Protein of unknown function (DUF3438) 17 271 8.9E-109 T 01-11-2018 IPR021844 Integrating conjugative element protein, PFL4704 D3790_00340 e1c29809dd04811dc1562f8130879b63 278 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 20 262 8.7E-101 T 01-11-2018 IPR021844 Integrating conjugative element protein, PFL4704 D3790_17485 2961fa354cf976e31eea95b9febc9a54 156 SUPERFAMILY SSF55234 88 155 2.75E-29 T 01-11-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 D3790_17485 2961fa354cf976e31eea95b9febc9a54 156 Hamap MF_00535 Cyanate hydratase [cynS]. 1 156 75.431 T 01-11-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 D3790_17485 2961fa354cf976e31eea95b9febc9a54 156 TIGRFAM TIGR00673 cynS: cyanase 1 156 6.6E-67 T 01-11-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 D3790_17485 2961fa354cf976e31eea95b9febc9a54 156 SMART SM01116 83 156 1.7E-45 T 01-11-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 D3790_17485 2961fa354cf976e31eea95b9febc9a54 156 Gene3D G3DSA:1.10.260.40 1 88 7.7E-29 T 01-11-2018 D3790_17485 2961fa354cf976e31eea95b9febc9a54 156 Gene3D G3DSA:3.30.1160.10 89 156 5.1E-34 T 01-11-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 D3790_17485 2961fa354cf976e31eea95b9febc9a54 156 PIRSF PIRSF001263 3 156 2.8E-64 T 01-11-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 D3790_17485 2961fa354cf976e31eea95b9febc9a54 156 PRINTS PR01693 Cyanase signature 91 105 2.5E-32 T 01-11-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 D3790_17485 2961fa354cf976e31eea95b9febc9a54 156 PRINTS PR01693 Cyanase signature 109 125 2.5E-32 T 01-11-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 D3790_17485 2961fa354cf976e31eea95b9febc9a54 156 PRINTS PR01693 Cyanase signature 141 151 2.5E-32 T 01-11-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 D3790_17485 2961fa354cf976e31eea95b9febc9a54 156 PRINTS PR01693 Cyanase signature 42 59 2.5E-32 T 01-11-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 D3790_17485 2961fa354cf976e31eea95b9febc9a54 156 PRINTS PR01693 Cyanase signature 22 37 2.5E-32 T 01-11-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 D3790_17485 2961fa354cf976e31eea95b9febc9a54 156 Pfam PF02560 Cyanate lyase C-terminal domain 87 154 6.9E-32 T 01-11-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 D3790_17485 2961fa354cf976e31eea95b9febc9a54 156 SUPERFAMILY SSF47413 1 85 9.27E-21 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_02760 8db41de0e56b7f2b1dd741aaacb67d41 132 SUPERFAMILY SSF56801 1 131 8.63E-25 T 01-11-2018 D3790_02760 8db41de0e56b7f2b1dd741aaacb67d41 132 Gene3D G3DSA:3.30.300.30 1 132 4.0E-24 T 01-11-2018 D3790_02760 8db41de0e56b7f2b1dd741aaacb67d41 132 Pfam PF13193 AMP-binding enzyme C-terminal domain 13 96 7.8E-23 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_17785 812f3fc5154116381328f61aa5cc152b 380 Pfam PF07282 Putative transposase DNA-binding domain 291 361 4.2E-23 T 01-11-2018 IPR010095 Transposase IS605, OrfB, C-terminal D3790_17785 812f3fc5154116381328f61aa5cc152b 380 Pfam PF01385 Probable transposase 175 278 1.1E-23 T 01-11-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 D3790_17785 812f3fc5154116381328f61aa5cc152b 380 Pfam PF12323 Helix-turn-helix domain 1 45 3.2E-16 T 01-11-2018 IPR021027 Transposase, putative, helix-turn-helix domain D3790_17785 812f3fc5154116381328f61aa5cc152b 380 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 246 318 3.4E-11 T 01-11-2018 IPR010095 Transposase IS605, OrfB, C-terminal D3790_14455 812f3fc5154116381328f61aa5cc152b 380 Pfam PF07282 Putative transposase DNA-binding domain 291 361 4.2E-23 T 01-11-2018 IPR010095 Transposase IS605, OrfB, C-terminal D3790_14455 812f3fc5154116381328f61aa5cc152b 380 Pfam PF01385 Probable transposase 175 278 1.1E-23 T 01-11-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 D3790_14455 812f3fc5154116381328f61aa5cc152b 380 Pfam PF12323 Helix-turn-helix domain 1 45 3.2E-16 T 01-11-2018 IPR021027 Transposase, putative, helix-turn-helix domain D3790_14455 812f3fc5154116381328f61aa5cc152b 380 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 246 318 3.4E-11 T 01-11-2018 IPR010095 Transposase IS605, OrfB, C-terminal D3790_16920 0cd57c35a64dc489a02cf2afd4dc034a 72 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 1.7E-34 T 01-11-2018 IPR010648 Uncharacterised protein family UPF0270 D3790_16920 0cd57c35a64dc489a02cf2afd4dc034a 72 Gene3D G3DSA:1.10.10.610 1 72 3.7E-30 T 01-11-2018 IPR036685 YehU-like superfamily D3790_16920 0cd57c35a64dc489a02cf2afd4dc034a 72 SUPERFAMILY SSF118001 1 70 5.89E-29 T 01-11-2018 IPR036685 YehU-like superfamily D3790_16920 0cd57c35a64dc489a02cf2afd4dc034a 72 PIRSF PIRSF006169 1 72 2.8E-36 T 01-11-2018 IPR010648 Uncharacterised protein family UPF0270 D3790_16920 0cd57c35a64dc489a02cf2afd4dc034a 72 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.352 T 01-11-2018 IPR010648 Uncharacterised protein family UPF0270 D3790_16920 0cd57c35a64dc489a02cf2afd4dc034a 72 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 68 9.0E-27 T 01-11-2018 IPR010648 Uncharacterised protein family UPF0270 D3790_08710 9ffe70df3cb87794e22d4dea1e78a01d 109 Pfam PF04358 DsrC like protein 4 109 4.2E-47 T 01-11-2018 IPR007453 Sulphur transfer protein DsrC/TusE D3790_08710 9ffe70df3cb87794e22d4dea1e78a01d 109 PIRSF PIRSF006223 2 109 5.7E-47 T 01-11-2018 IPR007453 Sulphur transfer protein DsrC/TusE D3790_08710 9ffe70df3cb87794e22d4dea1e78a01d 109 SUPERFAMILY SSF69721 2 109 2.49E-42 T 01-11-2018 IPR025526 DsrC-like domain superfamily D3790_08710 9ffe70df3cb87794e22d4dea1e78a01d 109 Gene3D G3DSA:1.10.10.370 39 109 7.3E-34 T 01-11-2018 D3790_08710 9ffe70df3cb87794e22d4dea1e78a01d 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 1.1E-51 T 01-11-2018 IPR007453 Sulphur transfer protein DsrC/TusE D3790_08710 9ffe70df3cb87794e22d4dea1e78a01d 109 Gene3D G3DSA:3.30.1420.10 1 37 6.8E-10 T 01-11-2018 D3790_17140 1c2f9aad5134139d6238edef99267408 296 Gene3D G3DSA:1.10.3720.10 1 283 1.1E-74 T 01-11-2018 IPR035906 MetI-like superfamily D3790_17140 1c2f9aad5134139d6238edef99267408 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 2.5E-17 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_17140 1c2f9aad5134139d6238edef99267408 296 SUPERFAMILY SSF161098 7 296 2.75E-71 T 01-11-2018 IPR035906 MetI-like superfamily D3790_15565 a45499333395a57c8ffbf42d5bf5d32a 363 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 356 1.4E-40 T 01-11-2018 IPR003395 RecF/RecN/SMC, N-terminal D3790_15565 a45499333395a57c8ffbf42d5bf5d32a 363 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 363 98.52 T 01-11-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 D3790_15565 a45499333395a57c8ffbf42d5bf5d32a 363 Gene3D G3DSA:1.20.1050.90 122 299 6.2E-82 T 01-11-2018 D3790_15565 a45499333395a57c8ffbf42d5bf5d32a 363 SUPERFAMILY SSF52540 1 357 9.35E-42 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_15565 a45499333395a57c8ffbf42d5bf5d32a 363 Gene3D G3DSA:3.40.50.300 8 333 6.2E-82 T 01-11-2018 D3790_15565 a45499333395a57c8ffbf42d5bf5d32a 363 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 357 1.0E-133 T 01-11-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 D3790_15565 a45499333395a57c8ffbf42d5bf5d32a 363 ProSitePatterns PS00618 RecF protein signature 2. 300 318 - T 01-11-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 D3790_15565 a45499333395a57c8ffbf42d5bf5d32a 363 ProSitePatterns PS00617 RecF protein signature 1. 119 139 - T 01-11-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 D3790_03730 4ac4701d8cf2fa96742a775779e20c6f 356 Pfam PF06519 TolA C-terminal 260 353 7.3E-28 T 01-11-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 D3790_03730 4ac4701d8cf2fa96742a775779e20c6f 356 TIGRFAM TIGR02794 tolA_full: protein TolA 16 355 8.7E-85 T 01-11-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 D3790_03730 4ac4701d8cf2fa96742a775779e20c6f 356 SUPERFAMILY SSF74653 268 356 5.3E-21 T 01-11-2018 D3790_03730 4ac4701d8cf2fa96742a775779e20c6f 356 Gene3D G3DSA:3.30.1150.10 266 356 6.7E-30 T 01-11-2018 D3790_15620 91a307f7ea9e4f29ea8d68679efd64de 117 Pfam PF04389 Peptidase family M28 2 84 6.4E-13 T 01-11-2018 IPR007484 Peptidase M28 D3790_15620 91a307f7ea9e4f29ea8d68679efd64de 117 SUPERFAMILY SSF53187 2 103 2.0E-15 T 01-11-2018 D3790_15620 91a307f7ea9e4f29ea8d68679efd64de 117 Gene3D G3DSA:3.40.630.10 1 108 8.0E-15 T 01-11-2018 D3790_01070 cf07583b7da02a1b1bccd824ad09ca9c 313 Gene3D G3DSA:1.10.10.10 3 89 7.2E-22 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_01070 cf07583b7da02a1b1bccd824ad09ca9c 313 SUPERFAMILY SSF53850 90 294 5.25E-45 T 01-11-2018 D3790_01070 cf07583b7da02a1b1bccd824ad09ca9c 313 Gene3D G3DSA:3.40.190.290 92 291 3.0E-60 T 01-11-2018 D3790_01070 cf07583b7da02a1b1bccd824ad09ca9c 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 6.8E-16 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_01070 cf07583b7da02a1b1bccd824ad09ca9c 313 SUPERFAMILY SSF46785 6 111 6.75E-17 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_01070 cf07583b7da02a1b1bccd824ad09ca9c 313 Pfam PF03466 LysR substrate binding domain 88 291 1.6E-41 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_11695 d48bcc89842c1dcd5eda74041bb6c07d 520 Pfam PF12626 Polymerase A arginine-rich C-terminus 390 506 8.6E-44 T 01-11-2018 IPR025866 Polymerase A arginine-rich C-terminal domain D3790_11695 d48bcc89842c1dcd5eda74041bb6c07d 520 Pfam PF01743 Poly A polymerase head domain 113 245 2.0E-38 T 01-11-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 D3790_11695 d48bcc89842c1dcd5eda74041bb6c07d 520 SUPERFAMILY SSF81301 84 241 6.98E-39 T 01-11-2018 D3790_11695 d48bcc89842c1dcd5eda74041bb6c07d 520 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 76 506 38.328 T 01-11-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 D3790_11695 d48bcc89842c1dcd5eda74041bb6c07d 520 SUPERFAMILY SSF81891 243 482 1.83E-51 T 01-11-2018 D3790_11695 d48bcc89842c1dcd5eda74041bb6c07d 520 Gene3D G3DSA:3.30.460.10 79 242 1.3E-63 T 01-11-2018 D3790_11695 d48bcc89842c1dcd5eda74041bb6c07d 520 Gene3D G3DSA:1.10.3090.10 243 494 6.0E-102 T 01-11-2018 D3790_11695 d48bcc89842c1dcd5eda74041bb6c07d 520 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 272 332 3.1E-19 T 01-11-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 D3790_11695 d48bcc89842c1dcd5eda74041bb6c07d 520 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 82 514 3.0E-160 T 01-11-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 D3790_12605 cd2f9b669008b4cd8801ffad250d088d 669 SUPERFAMILY SSF56322 126 415 4.58E-59 T 01-11-2018 IPR005801 ADC synthase GO:0009058 D3790_12605 cd2f9b669008b4cd8801ffad250d088d 669 Pfam PF00117 Glutamine amidotransferase class-I 472 655 7.3E-20 T 01-11-2018 IPR017926 Glutamine amidotransferase D3790_12605 cd2f9b669008b4cd8801ffad250d088d 669 Pfam PF00425 chorismate binding enzyme 151 407 3.5E-46 T 01-11-2018 IPR015890 Chorismate-utilising enzyme, C-terminal D3790_12605 cd2f9b669008b4cd8801ffad250d088d 669 Gene3D G3DSA:3.60.120.10 11 416 3.6E-105 T 01-11-2018 IPR005801 ADC synthase GO:0009058 D3790_12605 cd2f9b669008b4cd8801ffad250d088d 669 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 551 567 8.8E-6 T 01-11-2018 D3790_12605 cd2f9b669008b4cd8801ffad250d088d 669 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 515 529 8.8E-6 T 01-11-2018 D3790_12605 cd2f9b669008b4cd8801ffad250d088d 669 PRINTS PR00096 Glutamine amidotransferase superfamily signature 518 527 1.8E-8 T 01-11-2018 D3790_12605 cd2f9b669008b4cd8801ffad250d088d 669 PRINTS PR00096 Glutamine amidotransferase superfamily signature 551 562 1.8E-8 T 01-11-2018 D3790_12605 cd2f9b669008b4cd8801ffad250d088d 669 PRINTS PR00096 Glutamine amidotransferase superfamily signature 637 650 1.8E-8 T 01-11-2018 D3790_12605 cd2f9b669008b4cd8801ffad250d088d 669 PRINTS PR00097 Anthranilate synthase component II signature 551 562 2.2E-7 T 01-11-2018 D3790_12605 cd2f9b669008b4cd8801ffad250d088d 669 PRINTS PR00097 Anthranilate synthase component II signature 637 650 2.2E-7 T 01-11-2018 D3790_12605 cd2f9b669008b4cd8801ffad250d088d 669 PRINTS PR00097 Anthranilate synthase component II signature 470 484 2.2E-7 T 01-11-2018 D3790_12605 cd2f9b669008b4cd8801ffad250d088d 669 SUPERFAMILY SSF52317 469 665 1.97E-23 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_12605 cd2f9b669008b4cd8801ffad250d088d 669 Gene3D G3DSA:3.40.50.880 469 664 7.1E-34 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_10200 3c1da7d165e1edb2fdb74610837913cd 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 3.0E-78 T 01-11-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 D3790_10200 3c1da7d165e1edb2fdb74610837913cd 565 Gene3D G3DSA:3.40.50.10380 18 268 9.5E-115 T 01-11-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 D3790_10200 3c1da7d165e1edb2fdb74610837913cd 565 SMART SM00919 271 531 9.8E-137 T 01-11-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 D3790_10200 3c1da7d165e1edb2fdb74610837913cd 565 SMART SM01274 81 261 2.6E-106 T 01-11-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 D3790_10200 3c1da7d165e1edb2fdb74610837913cd 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 1.5E-106 T 01-11-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 D3790_10200 3c1da7d165e1edb2fdb74610837913cd 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 01-11-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 D3790_10200 3c1da7d165e1edb2fdb74610837913cd 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 71.985 T 01-11-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 D3790_10200 3c1da7d165e1edb2fdb74610837913cd 565 PIRSF PIRSF000106 2 563 1.4E-229 T 01-11-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 D3790_10200 3c1da7d165e1edb2fdb74610837913cd 565 SUPERFAMILY SSF51735 271 562 9.72E-96 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_10200 3c1da7d165e1edb2fdb74610837913cd 565 Gene3D G3DSA:3.40.50.720 269 565 2.2E-112 T 01-11-2018 D3790_10200 3c1da7d165e1edb2fdb74610837913cd 565 SUPERFAMILY SSF53223 7 270 4.89E-110 T 01-11-2018 D3790_10200 3c1da7d165e1edb2fdb74610837913cd 565 PRINTS PR00072 Malic enzyme signature 267 283 4.0E-72 T 01-11-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 D3790_10200 3c1da7d165e1edb2fdb74610837913cd 565 PRINTS PR00072 Malic enzyme signature 87 111 4.0E-72 T 01-11-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 D3790_10200 3c1da7d165e1edb2fdb74610837913cd 565 PRINTS PR00072 Malic enzyme signature 242 260 4.0E-72 T 01-11-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 D3790_10200 3c1da7d165e1edb2fdb74610837913cd 565 PRINTS PR00072 Malic enzyme signature 408 424 4.0E-72 T 01-11-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 D3790_10200 3c1da7d165e1edb2fdb74610837913cd 565 PRINTS PR00072 Malic enzyme signature 147 176 4.0E-72 T 01-11-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 D3790_10200 3c1da7d165e1edb2fdb74610837913cd 565 PRINTS PR00072 Malic enzyme signature 183 205 4.0E-72 T 01-11-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 D3790_10200 3c1da7d165e1edb2fdb74610837913cd 565 PRINTS PR00072 Malic enzyme signature 298 314 4.0E-72 T 01-11-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 D3790_04660 3c6f68dd7472ebacf6c92b69ce9eef8d 826 Gene3D G3DSA:1.25.40.10 68 234 3.2E-9 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_04660 3c6f68dd7472ebacf6c92b69ce9eef8d 826 SUPERFAMILY SSF48452 98 199 1.57E-7 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_04660 3c6f68dd7472ebacf6c92b69ce9eef8d 826 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 10 826 1.0E-265 T 01-11-2018 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:1901515 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 ProSitePatterns PS00455 Putative AMP-binding domain signature. 635 646 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 SUPERFAMILY SSF47336 2091 2163 1.96E-20 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 509 915 1.5E-131 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1595 2010 9.3E-120 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Gene3D G3DSA:3.30.300.30 886 986 1.5E-24 T 01-11-2018 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Gene3D G3DSA:3.30.559.10 13 223 9.9E-33 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Gene3D G3DSA:3.40.50.12780 1567 1979 2.3E-124 T 01-11-2018 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Gene3D G3DSA:3.40.50.12780 481 883 2.9E-136 T 01-11-2018 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2122 2137 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 SUPERFAMILY SSF52777 1300 1540 9.78E-35 T 01-11-2018 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Gene3D G3DSA:3.30.559.30 2368 2615 1.8E-131 T 01-11-2018 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 SUPERFAMILY SSF52777 2372 2618 1.89E-56 T 01-11-2018 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 SUPERFAMILY SSF47336 992 1064 1.3E-15 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Gene3D G3DSA:3.30.559.30 1299 1548 5.9E-72 T 01-11-2018 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 SUPERFAMILY SSF52777 2187 2364 2.67E-43 T 01-11-2018 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 SUPERFAMILY SSF52777 13 200 7.89E-23 T 01-11-2018 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2710 2725 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Pfam PF13193 AMP-binding enzyme C-terminal domain 1994 2072 6.0E-11 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Pfam PF13193 AMP-binding enzyme C-terminal domain 899 973 1.3E-6 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Gene3D G3DSA:1.10.1200.10 987 1072 3.6E-21 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Gene3D G3DSA:3.30.559.10 1126 1484 5.9E-72 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 SUPERFAMILY SSF47336 2679 2752 6.41E-18 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 SUPERFAMILY SSF56801 475 1012 7.85E-148 T 01-11-2018 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Gene3D G3DSA:3.30.559.30 248 456 2.5E-23 T 01-11-2018 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Gene3D G3DSA:3.30.300.30 1980 2087 8.7E-31 T 01-11-2018 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Pfam PF00550 Phosphopantetheine attachment site 2100 2163 1.3E-12 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Pfam PF00550 Phosphopantetheine attachment site 2689 2751 9.9E-12 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Pfam PF00550 Phosphopantetheine attachment site 1002 1064 1.5E-8 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 SUPERFAMILY SSF52777 1118 1313 2.22E-30 T 01-11-2018 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Pfam PF00501 AMP-binding enzyme 489 890 1.7E-99 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Pfam PF00501 AMP-binding enzyme 1574 1986 1.7E-94 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1715 1726 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 SUPERFAMILY SSF56801 1535 2111 1.57E-152 T 01-11-2018 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Pfam PF00668 Condensation domain 1121 1553 3.5E-46 T 01-11-2018 IPR001242 Condensation domain D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Pfam PF00668 Condensation domain 10 464 1.0E-58 T 01-11-2018 IPR001242 Condensation domain D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Pfam PF00668 Condensation domain 2184 2637 1.0E-101 T 01-11-2018 IPR001242 Condensation domain D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 SUPERFAMILY SSF52777 206 453 1.45E-34 T 01-11-2018 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Gene3D G3DSA:1.10.1200.10 2674 2759 6.1E-22 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Gene3D G3DSA:1.10.1200.10 2088 2170 4.2E-27 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 Gene3D G3DSA:3.30.559.10 2186 2556 1.8E-131 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 SMART SM00823 Phosphopantetheine attachment site 2098 2167 4.4E-4 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 SMART SM00823 Phosphopantetheine attachment site 2686 2755 0.013 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_06280 d819237d29f8e9e39a393ecd0848ba86 2773 SMART SM00823 Phosphopantetheine attachment site 1000 1068 0.056 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_08365 87cae367af5aee0746b6bd3faea67896 118 Gene3D G3DSA:1.10.1900.20 56 118 2.6E-29 T 01-11-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_08365 87cae367af5aee0746b6bd3faea67896 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.068 T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_08365 87cae367af5aee0746b6bd3faea67896 118 Gene3D G3DSA:1.10.720.90 2 55 5.5E-25 T 01-11-2018 D3790_08365 87cae367af5aee0746b6bd3faea67896 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 5.0E-14 T 01-11-2018 D3790_08365 87cae367af5aee0746b6bd3faea67896 118 Pfam PF00453 Ribosomal protein L20 3 109 2.9E-49 T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_08365 87cae367af5aee0746b6bd3faea67896 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-42 T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_08365 87cae367af5aee0746b6bd3faea67896 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-42 T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_08365 87cae367af5aee0746b6bd3faea67896 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-42 T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_08365 87cae367af5aee0746b6bd3faea67896 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.7E-53 T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_08365 87cae367af5aee0746b6bd3faea67896 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_08365 87cae367af5aee0746b6bd3faea67896 118 SUPERFAMILY SSF74731 3 117 8.11E-51 T 01-11-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Gene3D G3DSA:3.30.559.10 28 223 1.3E-45 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 SUPERFAMILY SSF56801 1559 2117 3.79E-160 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Gene3D G3DSA:3.30.559.30 3495 3743 2.4E-78 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 SUPERFAMILY SSF52777 206 498 1.07E-32 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Gene3D G3DSA:3.30.559.30 1323 1574 1.5E-87 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Pfam PF13193 AMP-binding enzyme C-terminal domain 920 995 2.2E-10 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Pfam PF13193 AMP-binding enzyme C-terminal domain 2003 2078 4.0E-11 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Pfam PF13193 AMP-binding enzyme C-terminal domain 3092 3172 5.4E-10 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1742 1753 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Pfam PF00501 AMP-binding enzyme 1599 1995 1.7E-103 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Pfam PF00501 AMP-binding enzyme 511 912 6.3E-111 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Pfam PF00501 AMP-binding enzyme 2671 3084 2.7E-104 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Gene3D G3DSA:3.30.300.30 3079 3187 2.6E-32 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 SUPERFAMILY SSF52777 2186 2392 2.33E-45 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 SUPERFAMILY SSF52777 3499 3733 1.63E-39 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 SUPERFAMILY SSF47336 2099 2171 8.64E-18 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Gene3D G3DSA:3.40.50.12780 2664 3076 3.6E-138 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 SUPERFAMILY SSF56801 2620 3211 1.26E-156 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Gene3D G3DSA:1.10.1200.10 3769 3850 6.2E-21 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Gene3D G3DSA:3.30.300.30 1989 2092 6.8E-36 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Gene3D G3DSA:3.30.300.30 906 1007 2.7E-33 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Gene3D G3DSA:1.10.1200.10 3188 3269 7.9E-19 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Gene3D G3DSA:1.10.1200.10 2093 2175 6.9E-23 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Pfam PF00668 Condensation domain 3317 3706 2.5E-47 T 01-11-2018 IPR001242 Condensation domain D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Pfam PF00668 Condensation domain 2190 2638 5.5E-107 T 01-11-2018 IPR001242 Condensation domain D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Pfam PF00668 Condensation domain 1140 1578 1.7E-51 T 01-11-2018 IPR001242 Condensation domain D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Pfam PF00668 Condensation domain 26 491 3.3E-72 T 01-11-2018 IPR001242 Condensation domain D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3806 3821 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 SMART SM00823 Phosphopantetheine attachment site 2105 2174 0.0089 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 SUPERFAMILY SSF52777 2381 2643 7.45E-63 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Gene3D G3DSA:3.30.559.10 1145 1508 1.5E-87 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Gene3D G3DSA:3.30.559.10 3322 3680 2.4E-78 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 SUPERFAMILY SSF47336 3775 3844 3.14E-15 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 SUPERFAMILY SSF52777 1324 1585 2.11E-44 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2692 3108 9.6E-138 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1619 2019 2.4E-135 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 532 936 5.2E-142 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Gene3D G3DSA:3.30.559.10 2192 2567 2.9E-147 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 SUPERFAMILY SSF52777 3314 3509 1.45E-33 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Gene3D G3DSA:3.40.50.12780 1588 1987 1.2E-133 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Gene3D G3DSA:3.40.50.12780 501 904 4.2E-147 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Gene3D G3DSA:1.10.1200.10 1008 1096 8.5E-20 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 ProSitePatterns PS00455 Putative AMP-binding domain signature. 663 674 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 SUPERFAMILY SSF47336 1014 1084 4.84E-14 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Gene3D G3DSA:3.30.559.30 2376 2622 2.9E-147 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2818 2829 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Pfam PF00550 Phosphopantetheine attachment site 2108 2169 3.3E-11 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Pfam PF00550 Phosphopantetheine attachment site 3202 3262 5.1E-5 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Pfam PF00550 Phosphopantetheine attachment site 3784 3843 3.3E-9 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Pfam PF00550 Phosphopantetheine attachment site 1025 1083 3.5E-5 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 SUPERFAMILY SSF52777 28 200 5.89E-37 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 Gene3D G3DSA:3.30.559.30 253 482 1.2E-26 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 SUPERFAMILY SSF56801 472 1035 2.22E-167 T 01-11-2018 D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 SUPERFAMILY SSF47336 3191 3263 4.32E-14 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04865 fd33fa6a04d11aef02a090fb0c048bf5 3857 SUPERFAMILY SSF52777 1137 1337 1.78E-31 T 01-11-2018 D3790_16150 f7bb609d9d880da8693cac143f86eeb4 478 SMART SM00382 161 304 5.0E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_16150 f7bb609d9d880da8693cac143f86eeb4 478 Gene3D G3DSA:1.10.10.60 388 478 1.6E-22 T 01-11-2018 D3790_16150 f7bb609d9d880da8693cac143f86eeb4 478 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 441 458 1.0E-9 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D3790_16150 f7bb609d9d880da8693cac143f86eeb4 478 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 458 478 1.0E-9 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D3790_16150 f7bb609d9d880da8693cac143f86eeb4 478 Gene3D G3DSA:3.40.50.300 127 311 5.1E-66 T 01-11-2018 D3790_16150 f7bb609d9d880da8693cac143f86eeb4 478 Pfam PF00072 Response regulator receiver domain 6 115 1.0E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_16150 f7bb609d9d880da8693cac143f86eeb4 478 Gene3D G3DSA:3.40.50.2300 1 124 2.0E-42 T 01-11-2018 D3790_16150 f7bb609d9d880da8693cac143f86eeb4 478 SUPERFAMILY SSF52540 140 383 4.64E-73 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16150 f7bb609d9d880da8693cac143f86eeb4 478 SMART SM00448 4 115 3.5E-34 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_16150 f7bb609d9d880da8693cac143f86eeb4 478 Gene3D G3DSA:1.10.8.60 312 387 1.8E-18 T 01-11-2018 D3790_16150 f7bb609d9d880da8693cac143f86eeb4 478 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3790_16150 f7bb609d9d880da8693cac143f86eeb4 478 SUPERFAMILY SSF52172 1 186 1.42E-45 T 01-11-2018 IPR011006 CheY-like superfamily D3790_16150 f7bb609d9d880da8693cac143f86eeb4 478 Pfam PF00158 Sigma-54 interaction domain 141 307 5.1E-70 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D3790_16150 f7bb609d9d880da8693cac143f86eeb4 478 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3790_16150 f7bb609d9d880da8693cac143f86eeb4 478 Pfam PF02954 Bacterial regulatory protein, Fis family 435 475 1.0E-12 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D3790_16150 f7bb609d9d880da8693cac143f86eeb4 478 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 475 2.4E-232 T 01-11-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 D3790_16150 f7bb609d9d880da8693cac143f86eeb4 478 SUPERFAMILY SSF46689 392 478 4.3E-19 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_07655 8804c72609461a558c7221d676b47d09 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 35.602 T 01-11-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 D3790_07655 8804c72609461a558c7221d676b47d09 196 SUPERFAMILY SSF53178 4 193 1.2E-69 T 01-11-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 D3790_07655 8804c72609461a558c7221d676b47d09 196 Pfam PF01195 Peptidyl-tRNA hydrolase 6 189 3.3E-53 T 01-11-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 D3790_07655 8804c72609461a558c7221d676b47d09 196 Gene3D G3DSA:3.40.50.1470 1 195 7.2E-73 T 01-11-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 D3790_07655 8804c72609461a558c7221d676b47d09 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 01-11-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 D3790_07655 8804c72609461a558c7221d676b47d09 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 01-11-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 D3790_07655 8804c72609461a558c7221d676b47d09 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 190 3.4E-70 T 01-11-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 D3790_14165 93343946ed2c5c36e212cf079863c7d2 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 01-11-2018 IPR018038 Ribosomal protein L30, conserved site D3790_14165 93343946ed2c5c36e212cf079863c7d2 59 SUPERFAMILY SSF55129 3 59 4.45E-22 T 01-11-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily D3790_14165 93343946ed2c5c36e212cf079863c7d2 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.607 T 01-11-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14165 93343946ed2c5c36e212cf079863c7d2 59 Gene3D G3DSA:3.30.1390.20 1 59 7.2E-28 T 01-11-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily D3790_14165 93343946ed2c5c36e212cf079863c7d2 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 2.0E-27 T 01-11-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14165 93343946ed2c5c36e212cf079863c7d2 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 2.0E-20 T 01-11-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain D3790_14165 93343946ed2c5c36e212cf079863c7d2 59 PIRSF PIRSF002211 1 59 1.5E-29 T 01-11-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_08325 0f074ed6da4f49a77a67005dce1d7cbb 673 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 2.3E-43 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 D3790_08325 0f074ed6da4f49a77a67005dce1d7cbb 673 Gene3D G3DSA:3.40.50.720 314 656 1.2E-123 T 01-11-2018 D3790_08325 0f074ed6da4f49a77a67005dce1d7cbb 673 Gene3D G3DSA:3.40.50.12230 1 304 2.0E-107 T 01-11-2018 D3790_08325 0f074ed6da4f49a77a67005dce1d7cbb 673 SUPERFAMILY SSF51735 316 650 1.24E-71 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_08325 0f074ed6da4f49a77a67005dce1d7cbb 673 PIRSF PIRSF036506 1 660 0.0 T 01-11-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00520+2.1.2.13+1.1.1.305 D3790_08325 0f074ed6da4f49a77a67005dce1d7cbb 673 Pfam PF00551 Formyl transferase 57 173 1.1E-25 T 01-11-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D3790_08325 0f074ed6da4f49a77a67005dce1d7cbb 673 SUPERFAMILY SSF53328 1 202 1.44E-55 T 01-11-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D3790_08325 0f074ed6da4f49a77a67005dce1d7cbb 673 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 63.658 T 01-11-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00520+2.1.2.13+1.1.1.305 D3790_08325 0f074ed6da4f49a77a67005dce1d7cbb 673 SUPERFAMILY SSF50486 204 302 1.57E-24 T 01-11-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 D3790_08325 0f074ed6da4f49a77a67005dce1d7cbb 673 Pfam PF02911 Formyl transferase, C-terminal domain 202 281 4.7E-19 T 01-11-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D3790_17000 91246b4d94a1d7ab2a3a48d1c6bcee56 530 SUPERFAMILY SSF53067 262 511 2.47E-47 T 01-11-2018 D3790_17000 91246b4d94a1d7ab2a3a48d1c6bcee56 530 PIRSF PIRSF000538 11 519 3.8E-113 T 01-11-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 D3790_17000 91246b4d94a1d7ab2a3a48d1c6bcee56 530 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 13 260 2.4E-48 T 01-11-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 D3790_17000 91246b4d94a1d7ab2a3a48d1c6bcee56 530 SUPERFAMILY SSF53067 12 263 3.02E-56 T 01-11-2018 D3790_17000 91246b4d94a1d7ab2a3a48d1c6bcee56 530 Gene3D G3DSA:3.30.420.40 253 518 6.9E-50 T 01-11-2018 D3790_17000 91246b4d94a1d7ab2a3a48d1c6bcee56 530 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 301 467 3.3E-18 T 01-11-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 D3790_17000 91246b4d94a1d7ab2a3a48d1c6bcee56 530 Gene3D G3DSA:3.30.420.40 7 251 1.4E-59 T 01-11-2018 D3790_17000 91246b4d94a1d7ab2a3a48d1c6bcee56 530 Hamap MF_02053 Autoinducer-2 kinase [lsrK]. 15 530 78.319 T 01-11-2018 IPR033676 Autoinducer-2 kinase GO:0009372|GO:0071518 D3790_04985 40e93732815f713b79acf588aaf8c1b2 190 Gene3D G3DSA:2.30.30.30 1 65 8.1E-16 T 01-11-2018 IPR014722 Ribosomal protein L2, domain 2 D3790_04985 40e93732815f713b79acf588aaf8c1b2 190 SMART SM01185 69 125 7.4E-12 T 01-11-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 D3790_04985 40e93732815f713b79acf588aaf8c1b2 190 SUPERFAMILY SSF50249 132 189 2.57E-13 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_04985 40e93732815f713b79acf588aaf8c1b2 190 SUPERFAMILY SSF50104 1 64 1.02E-10 T 01-11-2018 IPR008991 Translation protein SH3-like domain superfamily D3790_04985 40e93732815f713b79acf588aaf8c1b2 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 4.1E-17 T 01-11-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 D3790_04985 40e93732815f713b79acf588aaf8c1b2 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 61 7.6E-16 T 01-11-2018 IPR013185 Translation elongation factor, KOW-like D3790_04985 40e93732815f713b79acf588aaf8c1b2 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 01-11-2018 IPR013852 Translation elongation factor P/YeiP, conserved site D3790_04985 40e93732815f713b79acf588aaf8c1b2 190 SUPERFAMILY SSF50249 67 130 2.91E-9 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_04985 40e93732815f713b79acf588aaf8c1b2 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 1.1E-11 T 01-11-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 D3790_04985 40e93732815f713b79acf588aaf8c1b2 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 1.4E-93 T 01-11-2018 IPR011897 Translation elongation factor P-like, YeiP D3790_04985 40e93732815f713b79acf588aaf8c1b2 190 Gene3D G3DSA:2.40.50.140 132 189 3.8E-18 T 01-11-2018 D3790_04985 40e93732815f713b79acf588aaf8c1b2 190 PIRSF PIRSF005901 1 190 5.0E-58 T 01-11-2018 IPR020599 Translation elongation factor P/YeiP D3790_04985 40e93732815f713b79acf588aaf8c1b2 190 Gene3D G3DSA:2.40.50.140 66 130 1.3E-13 T 01-11-2018 D3790_04985 40e93732815f713b79acf588aaf8c1b2 190 SMART SM00841 133 188 5.2E-24 T 01-11-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 D3790_04985 40e93732815f713b79acf588aaf8c1b2 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 42.075 T 01-11-2018 IPR011897 Translation elongation factor P-like, YeiP D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 Pfam PF04546 Sigma-70, non-essential region 139 351 1.3E-73 T 01-11-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 SUPERFAMILY SSF88946 115 449 1.19E-102 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 Gene3D G3DSA:1.10.10.10 455 531 9.5E-33 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 Gene3D G3DSA:1.10.220.120 1 64 4.3E-31 T 01-11-2018 D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 Pfam PF04539 Sigma-70 region 3 461 536 3.5E-29 T 01-11-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 378 603 1.8E-37 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 Pfam PF04545 Sigma-70, region 4 550 603 1.0E-18 T 01-11-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 406 419 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 Gene3D G3DSA:1.10.601.10 113 451 7.1E-149 T 01-11-2018 D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 Pfam PF04542 Sigma-70 region 2 382 451 1.7E-21 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 575 601 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 PRINTS PR00046 Major sigma-70 factor signature 406 419 6.5E-31 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 PRINTS PR00046 Major sigma-70 factor signature 575 590 6.5E-31 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 PRINTS PR00046 Major sigma-70 factor signature 430 438 6.5E-31 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 PRINTS PR00046 Major sigma-70 factor signature 590 601 6.5E-31 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 PRINTS PR00046 Major sigma-70 factor signature 554 566 6.5E-31 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 SUPERFAMILY SSF88659 455 528 2.81E-20 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.8E-12 T 01-11-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 615 46.457 T 01-11-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 SUPERFAMILY SSF88659 512 614 1.8E-25 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 Gene3D G3DSA:1.10.10.10 532 616 1.9E-37 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 2.2E-30 T 01-11-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 D3790_17955 9cf220101e4963c9cca397d3335a0f51 616 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 378 614 1.3E-120 T 01-11-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 D3790_05535 5d647b06f4def4e7f68c1b0c1c7c17de 759 SUPERFAMILY SSF53223 10 161 2.81E-53 T 01-11-2018 D3790_05535 5d647b06f4def4e7f68c1b0c1c7c17de 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 361 9.4E-18 T 01-11-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 D3790_05535 5d647b06f4def4e7f68c1b0c1c7c17de 759 SUPERFAMILY SSF51735 163 452 2.7E-85 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_05535 5d647b06f4def4e7f68c1b0c1c7c17de 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 2.5E-98 T 01-11-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 D3790_05535 5d647b06f4def4e7f68c1b0c1c7c17de 759 PIRSF PIRSF036684 1 758 0.0 T 01-11-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 D3790_05535 5d647b06f4def4e7f68c1b0c1c7c17de 759 SUPERFAMILY SSF53659 430 754 2.71E-88 T 01-11-2018 D3790_05535 5d647b06f4def4e7f68c1b0c1c7c17de 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 01-11-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 D3790_05535 5d647b06f4def4e7f68c1b0c1c7c17de 759 Gene3D G3DSA:3.40.50.10950 447 751 8.2E-93 T 01-11-2018 D3790_05535 5d647b06f4def4e7f68c1b0c1c7c17de 759 Gene3D G3DSA:3.40.50.10380 1 160 2.6E-68 T 01-11-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 D3790_05535 5d647b06f4def4e7f68c1b0c1c7c17de 759 SMART SM00919 163 401 5.1E-138 T 01-11-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 D3790_05535 5d647b06f4def4e7f68c1b0c1c7c17de 759 SMART SM01274 18 151 7.8E-80 T 01-11-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 D3790_05535 5d647b06f4def4e7f68c1b0c1c7c17de 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 2.9E-27 T 01-11-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 D3790_05535 5d647b06f4def4e7f68c1b0c1c7c17de 759 Gene3D G3DSA:3.40.50.720 161 446 6.4E-81 T 01-11-2018 D3790_05535 5d647b06f4def4e7f68c1b0c1c7c17de 759 Gene3D G3DSA:3.40.50.10750 573 727 8.2E-93 T 01-11-2018 D3790_13460 ccd934c262995a781a0e69bd9aae43e7 456 SUPERFAMILY SSF51984 1 90 2.88E-23 T 01-11-2018 D3790_13460 ccd934c262995a781a0e69bd9aae43e7 456 Gene3D G3DSA:3.90.190.20 314 451 1.7E-29 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D3790_13460 ccd934c262995a781a0e69bd9aae43e7 456 Gene3D G3DSA:3.40.50.720 1 90 2.2E-35 T 01-11-2018 D3790_13460 ccd934c262995a781a0e69bd9aae43e7 456 SUPERFAMILY SSF53244 312 447 3.66E-35 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D3790_13460 ccd934c262995a781a0e69bd9aae43e7 456 Gene3D G3DSA:3.40.1190.10 91 313 3.4E-53 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D3790_13460 ccd934c262995a781a0e69bd9aae43e7 456 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 360 3.3E-8 T 01-11-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 D3790_13460 ccd934c262995a781a0e69bd9aae43e7 456 Pfam PF08245 Mur ligase middle domain 108 291 4.0E-18 T 01-11-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 D3790_13460 ccd934c262995a781a0e69bd9aae43e7 456 Pfam PF01225 Mur ligase family, catalytic domain 2 98 2.9E-18 T 01-11-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 D3790_13460 ccd934c262995a781a0e69bd9aae43e7 456 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 3.8E-254 T 01-11-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 D3790_13460 ccd934c262995a781a0e69bd9aae43e7 456 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 59.283 T 01-11-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 D3790_13460 ccd934c262995a781a0e69bd9aae43e7 456 SUPERFAMILY SSF53623 95 308 3.01E-47 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D3790_04630 fcaddb903af068f18016a9e3935bbc32 331 SUPERFAMILY SSF54826 1 104 1.96E-26 T 01-11-2018 D3790_04630 fcaddb903af068f18016a9e3935bbc32 331 Gene3D G3DSA:3.20.20.120 103 300 5.6E-123 T 01-11-2018 IPR036849 Enolase-like, C-terminal domain superfamily D3790_04630 fcaddb903af068f18016a9e3935bbc32 331 SUPERFAMILY SSF51604 112 310 2.49E-48 T 01-11-2018 IPR036849 Enolase-like, C-terminal domain superfamily D3790_04630 fcaddb903af068f18016a9e3935bbc32 331 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 326 22.08 T 01-11-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 D3790_04630 fcaddb903af068f18016a9e3935bbc32 331 SMART SM00922 120 215 2.9E-9 T 01-11-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal D3790_04630 fcaddb903af068f18016a9e3935bbc32 331 Gene3D G3DSA:3.30.390.10 4 307 5.6E-123 T 01-11-2018 IPR029017 Enolase-like, N-terminal D3790_04630 fcaddb903af068f18016a9e3935bbc32 331 Pfam PF13378 Enolase C-terminal domain-like 132 281 7.5E-15 T 01-11-2018 IPR029065 Enolase C-terminal domain-like D3790_04630 fcaddb903af068f18016a9e3935bbc32 331 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 312 4.0E-110 T 01-11-2018 D3790_17985 168671c7634129a734347afeb3fd7d83 117 SMART SM00905 4 114 4.2E-46 T 01-11-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 D3790_17985 168671c7634129a734347afeb3fd7d83 117 Pfam PF02152 Dihydroneopterin aldolase 4 113 6.7E-32 T 01-11-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 D3790_17985 168671c7634129a734347afeb3fd7d83 117 Gene3D G3DSA:3.30.1130.10 1 117 8.6E-43 T 01-11-2018 D3790_17985 168671c7634129a734347afeb3fd7d83 117 TIGRFAM TIGR00526 folB_dom: FolB domain 1 115 4.2E-37 T 01-11-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 D3790_17985 168671c7634129a734347afeb3fd7d83 117 SUPERFAMILY SSF55620 1 115 1.72E-37 T 01-11-2018 D3790_17985 168671c7634129a734347afeb3fd7d83 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 7.2E-29 T 01-11-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 D3790_14880 866e9763346990361c0631a36485bd2d 273 SMART SM00971 9 113 4.5E-60 T 01-11-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 D3790_14880 866e9763346990361c0631a36485bd2d 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.3E-74 T 01-11-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 D3790_14880 866e9763346990361c0631a36485bd2d 273 PIRSF PIRSF000441 75 266 2.0E-60 T 01-11-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 D3790_14880 866e9763346990361c0631a36485bd2d 273 Gene3D G3DSA:2.160.10.10 143 270 5.5E-38 T 01-11-2018 D3790_14880 866e9763346990361c0631a36485bd2d 273 SUPERFAMILY SSF51161 8 260 5.82E-67 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily D3790_14880 866e9763346990361c0631a36485bd2d 273 Gene3D G3DSA:1.10.3130.10 1 142 9.0E-54 T 01-11-2018 D3790_14880 866e9763346990361c0631a36485bd2d 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 227 2.3E-9 T 01-11-2018 IPR001451 Hexapeptide repeat D3790_14880 866e9763346990361c0631a36485bd2d 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 7.8E-38 T 01-11-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 D3790_14880 866e9763346990361c0631a36485bd2d 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 01-11-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D3790_17615 1bebc793e134874fbc6c6a488a10278d 213 SUPERFAMILY SSF47616 82 208 8.13E-25 T 01-11-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D3790_17615 1bebc793e134874fbc6c6a488a10278d 213 Gene3D G3DSA:3.40.30.10 11 202 5.3E-78 T 01-11-2018 D3790_17615 1bebc793e134874fbc6c6a488a10278d 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 194 1.4E-7 T 01-11-2018 IPR004046 Glutathione S-transferase, C-terminal D3790_17615 1bebc793e134874fbc6c6a488a10278d 213 Gene3D G3DSA:1.20.1050.10 89 193 5.3E-78 T 01-11-2018 D3790_17615 1bebc793e134874fbc6c6a488a10278d 213 SUPERFAMILY SSF52833 11 110 7.75E-22 T 01-11-2018 IPR036249 Thioredoxin-like superfamily D3790_17615 1bebc793e134874fbc6c6a488a10278d 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 2.2E-17 T 01-11-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 D3790_11765 f1fc9d3f996ccfe408ce845cb6faaab7 745 Gene3D G3DSA:3.10.20.30 401 474 4.8E-33 T 01-11-2018 IPR012675 Beta-grasp domain superfamily D3790_11765 f1fc9d3f996ccfe408ce845cb6faaab7 745 SUPERFAMILY SSF81301 196 411 3.27E-63 T 01-11-2018 D3790_11765 f1fc9d3f996ccfe408ce845cb6faaab7 745 Pfam PF13328 HD domain 35 191 1.4E-40 T 01-11-2018 IPR003607 HD/PDEase domain D3790_11765 f1fc9d3f996ccfe408ce845cb6faaab7 745 SUPERFAMILY SSF55021 669 742 3.47E-13 T 01-11-2018 D3790_11765 f1fc9d3f996ccfe408ce845cb6faaab7 745 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 63 740 3.6E-185 T 01-11-2018 IPR004811 RelA/SpoT family GO:0015969 D3790_11765 f1fc9d3f996ccfe408ce845cb6faaab7 745 Gene3D G3DSA:3.30.460.10 209 341 2.3E-48 T 01-11-2018 D3790_11765 f1fc9d3f996ccfe408ce845cb6faaab7 745 Pfam PF02824 TGS domain 407 466 4.8E-21 T 01-11-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 D3790_11765 f1fc9d3f996ccfe408ce845cb6faaab7 745 Gene3D G3DSA:1.10.3210.10 21 207 6.8E-39 T 01-11-2018 D3790_11765 f1fc9d3f996ccfe408ce845cb6faaab7 745 SUPERFAMILY SSF109604 23 207 5.96E-46 T 01-11-2018 D3790_11765 f1fc9d3f996ccfe408ce845cb6faaab7 745 SMART SM00954 251 361 2.1E-64 T 01-11-2018 IPR007685 RelA/SpoT GO:0015969 D3790_11765 f1fc9d3f996ccfe408ce845cb6faaab7 745 Pfam PF13291 ACT domain 665 741 2.1E-17 T 01-11-2018 IPR002912 ACT domain D3790_11765 f1fc9d3f996ccfe408ce845cb6faaab7 745 Gene3D G3DSA:3.30.70.260 664 744 6.0E-18 T 01-11-2018 D3790_11765 f1fc9d3f996ccfe408ce845cb6faaab7 745 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 4.5E-36 T 01-11-2018 IPR007685 RelA/SpoT GO:0015969 D3790_11765 f1fc9d3f996ccfe408ce845cb6faaab7 745 SUPERFAMILY SSF81271 400 466 3.27E-22 T 01-11-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 D3790_18475 ee1f0e8e1712e05277d8ef05353b119d 1160 Pfam PF02811 PHP domain 8 171 1.4E-42 T 01-11-2018 IPR004013 PHP domain GO:0003824 D3790_18475 ee1f0e8e1712e05277d8ef05353b119d 1160 Gene3D G3DSA:3.20.20.140 1 270 4.8E-94 T 01-11-2018 D3790_18475 ee1f0e8e1712e05277d8ef05353b119d 1160 Gene3D G3DSA:1.10.10.1600 433 510 5.6E-34 T 01-11-2018 D3790_18475 ee1f0e8e1712e05277d8ef05353b119d 1160 Gene3D G3DSA:1.10.150.870 775 886 2.8E-5 T 01-11-2018 D3790_18475 ee1f0e8e1712e05277d8ef05353b119d 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 734 8.5E-176 T 01-11-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_18475 ee1f0e8e1712e05277d8ef05353b119d 1160 SUPERFAMILY SSF89550 6 263 3.92E-18 T 01-11-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 D3790_18475 ee1f0e8e1712e05277d8ef05353b119d 1160 Pfam PF14579 Helix-hairpin-helix motif 808 897 1.4E-25 T 01-11-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_18475 ee1f0e8e1712e05277d8ef05353b119d 1160 SMART SM00481 7 74 2.2E-26 T 01-11-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal D3790_18475 ee1f0e8e1712e05277d8ef05353b119d 1160 Pfam PF01336 OB-fold nucleic acid binding domain 995 1071 2.7E-6 T 01-11-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 D3790_18475 ee1f0e8e1712e05277d8ef05353b119d 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1031 0.0 T 01-11-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_18475 ee1f0e8e1712e05277d8ef05353b119d 1160 Gene3D G3DSA:2.40.50.140 980 1079 2.3E-5 T 01-11-2018 D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 SMART SM01086 652 739 1.8E-31 T 01-11-2018 IPR019489 Clp ATPase, C-terminal D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 Gene3D G3DSA:1.10.1780.10 1 142 2.1E-41 T 01-11-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 652 732 5.1E-24 T 01-11-2018 IPR019489 Clp ATPase, C-terminal D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 SUPERFAMILY SSF52540 436 746 4.74E-76 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 Gene3D G3DSA:1.10.8.60 652 758 7.0E-32 T 01-11-2018 D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 SMART SM00382 486 653 2.4E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 SMART SM00382 205 350 9.1E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 1.2E-36 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 1.2E-36 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 1.2E-36 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 1.2E-36 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 01-11-2018 IPR028299 ClpA/B, conserved site 2 D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 6.2E-13 T 01-11-2018 IPR004176 Clp, N-terminal D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 341 1.3E-12 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 SUPERFAMILY SSF52540 166 424 6.29E-67 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 Gene3D G3DSA:1.10.8.60 355 437 3.7E-34 T 01-11-2018 D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 Pfam PF07724 AAA domain (Cdc48 subfamily) 485 644 1.5E-49 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 733 0.0 T 01-11-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 Gene3D G3DSA:3.40.50.300 438 651 3.5E-78 T 01-11-2018 D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 01-11-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 SUPERFAMILY SSF81923 1 140 4.58E-56 T 01-11-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 D3790_09985 36058360bf67c1ef66c9511643a6a5bc 761 Gene3D G3DSA:3.40.50.300 165 354 1.2E-62 T 01-11-2018 D3790_07360 6de283ae6d140c9f529f5e4833eadf64 439 Gene3D G3DSA:2.70.70.10 283 412 4.5E-48 T 01-11-2018 IPR011055 Duplicated hybrid motif D3790_07360 6de283ae6d140c9f529f5e4833eadf64 439 Gene3D G3DSA:3.10.450.350 82 171 1.1E-10 T 01-11-2018 D3790_07360 6de283ae6d140c9f529f5e4833eadf64 439 Pfam PF08525 Opacity-associated protein A N-terminal motif 11 38 1.1E-7 T 01-11-2018 IPR013731 Opacity-associated protein A, N-terminal D3790_07360 6de283ae6d140c9f529f5e4833eadf64 439 Pfam PF01551 Peptidase family M23 312 406 1.2E-33 T 01-11-2018 IPR016047 Peptidase M23 D3790_07360 6de283ae6d140c9f529f5e4833eadf64 439 SUPERFAMILY SSF51261 163 407 6.8E-68 T 01-11-2018 IPR011055 Duplicated hybrid motif D3790_07360 6de283ae6d140c9f529f5e4833eadf64 439 Gene3D G3DSA:3.10.450.350 179 281 3.8E-30 T 01-11-2018 D3790_05430 8ea5abb5454016bf27b32ce8eb4b3cd1 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 176 335 1.0E-34 T 01-11-2018 IPR010918 PurM-like, C-terminal domain D3790_05430 8ea5abb5454016bf27b32ce8eb4b3cd1 347 SUPERFAMILY SSF56042 171 336 4.34E-62 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily D3790_05430 8ea5abb5454016bf27b32ce8eb4b3cd1 347 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 46.862 T 01-11-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D3790_05430 8ea5abb5454016bf27b32ce8eb4b3cd1 347 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 335 4.3E-151 T 01-11-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D3790_05430 8ea5abb5454016bf27b32ce8eb4b3cd1 347 SUPERFAMILY SSF55326 7 170 6.13E-53 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily D3790_05430 8ea5abb5454016bf27b32ce8eb4b3cd1 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 164 7.5E-16 T 01-11-2018 IPR016188 PurM-like, N-terminal domain D3790_05430 8ea5abb5454016bf27b32ce8eb4b3cd1 347 Gene3D G3DSA:3.90.650.10 171 345 3.4E-70 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily D3790_05430 8ea5abb5454016bf27b32ce8eb4b3cd1 347 Gene3D G3DSA:3.30.1330.10 6 170 1.7E-68 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily D3790_18685 d3174642516d61373e18e6884745aa13 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 01-11-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 D3790_18685 d3174642516d61373e18e6884745aa13 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 01-11-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 D3790_18685 d3174642516d61373e18e6884745aa13 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 4.5E-84 T 01-11-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 D3790_18685 d3174642516d61373e18e6884745aa13 213 Pfam PF01081 KDPG and KHG aldolase 9 202 1.6E-87 T 01-11-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 D3790_18685 d3174642516d61373e18e6884745aa13 213 SUPERFAMILY SSF51569 3 208 1.01E-68 T 01-11-2018 D3790_18685 d3174642516d61373e18e6884745aa13 213 Gene3D G3DSA:3.20.20.70 1 212 1.7E-72 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_07465 35332b9602ea2383ccf73d52b018370b 262 SUPERFAMILY SSF53335 25 258 1.15E-38 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_07465 35332b9602ea2383ccf73d52b018370b 262 Gene3D G3DSA:3.40.50.150 24 261 5.1E-63 T 01-11-2018 D3790_07465 35332b9602ea2383ccf73d52b018370b 262 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 10 258 4.7E-116 T 01-11-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 D3790_07465 35332b9602ea2383ccf73d52b018370b 262 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 9 258 41.674 T 01-11-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 D3790_07465 35332b9602ea2383ccf73d52b018370b 262 Pfam PF13649 Methyltransferase domain 66 174 9.8E-12 T 01-11-2018 D3790_07465 35332b9602ea2383ccf73d52b018370b 262 PIRSF PIRSF006325 7 259 1.9E-118 T 01-11-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 D3790_03565 b3b580611453b5350cf63d9b1552fd52 177 SUPERFAMILY SSF82808 62 177 2.75E-49 T 01-11-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 D3790_03565 b3b580611453b5350cf63d9b1552fd52 177 Pfam PF17206 SeqA protein N-terminal domain 1 36 3.0E-22 T 01-11-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal D3790_03565 b3b580611453b5350cf63d9b1552fd52 177 Gene3D G3DSA:1.20.1380.10 64 177 6.7E-48 T 01-11-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 D3790_03565 b3b580611453b5350cf63d9b1552fd52 177 Pfam PF03925 SeqA protein C-terminal domain 67 175 1.0E-49 T 01-11-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 D3790_03565 b3b580611453b5350cf63d9b1552fd52 177 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 177 41.826 T 01-11-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 D3790_03565 b3b580611453b5350cf63d9b1552fd52 177 PIRSF PIRSF019401 1 177 3.9E-50 T 01-11-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 D3790_03565 b3b580611453b5350cf63d9b1552fd52 177 Gene3D G3DSA:1.10.1220.10 1 40 3.1E-23 T 01-11-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 D3790_03565 b3b580611453b5350cf63d9b1552fd52 177 SUPERFAMILY SSF47598 1 35 3.11E-12 T 01-11-2018 IPR010985 Ribbon-helix-helix GO:0006355 D3790_04110 4da051a1c49ba39a7530725fbcddf6c1 235 Gene3D G3DSA:3.30.70.1560 128 209 1.8E-60 T 01-11-2018 D3790_04110 4da051a1c49ba39a7530725fbcddf6c1 235 Gene3D G3DSA:3.10.290.10 1 62 6.3E-17 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D3790_04110 4da051a1c49ba39a7530725fbcddf6c1 235 SMART SM00363 1 58 1.9E-9 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_04110 4da051a1c49ba39a7530725fbcddf6c1 235 SUPERFAMILY SSF55174 1 55 1.91E-11 T 01-11-2018 D3790_04110 4da051a1c49ba39a7530725fbcddf6c1 235 Pfam PF00849 RNA pseudouridylate synthase 62 192 4.6E-18 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_04110 4da051a1c49ba39a7530725fbcddf6c1 235 SUPERFAMILY SSF55120 61 227 9.44E-47 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_04110 4da051a1c49ba39a7530725fbcddf6c1 235 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 224 3.2E-57 T 01-11-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 D3790_04110 4da051a1c49ba39a7530725fbcddf6c1 235 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 01-11-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 D3790_04110 4da051a1c49ba39a7530725fbcddf6c1 235 Pfam PF01479 S4 domain 1 47 2.2E-7 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_04110 4da051a1c49ba39a7530725fbcddf6c1 235 Gene3D G3DSA:3.30.70.580 63 227 1.8E-60 T 01-11-2018 D3790_16530 2127c2224006416a63513bd783a09034 425 Gene3D G3DSA:1.10.287.470 232 266 9.5E-12 T 01-11-2018 D3790_16530 2127c2224006416a63513bd783a09034 425 Gene3D G3DSA:2.40.50.100 267 306 9.5E-12 T 01-11-2018 D3790_16530 2127c2224006416a63513bd783a09034 425 Pfam PF13437 HlyD family secretion protein 271 360 4.9E-12 T 01-11-2018 D3790_16530 2127c2224006416a63513bd783a09034 425 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 315 339 1.9E-11 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D3790_16530 2127c2224006416a63513bd783a09034 425 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 282 303 1.9E-11 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D3790_16530 2127c2224006416a63513bd783a09034 425 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 388 403 1.9E-11 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D3790_16530 2127c2224006416a63513bd783a09034 425 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 87 107 1.9E-11 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D3790_16530 2127c2224006416a63513bd783a09034 425 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 403 423 1.9E-11 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D3790_16530 2127c2224006416a63513bd783a09034 425 Gene3D G3DSA:2.40.30.170 307 401 9.5E-12 T 01-11-2018 D3790_10720 c44cf664cda4327e29612587dbb2e0fd 365 PIRSF PIRSF006487 1 363 2.2E-78 T 01-11-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 D3790_10720 c44cf664cda4327e29612587dbb2e0fd 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 42.829 T 01-11-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 D3790_10720 c44cf664cda4327e29612587dbb2e0fd 365 Gene3D G3DSA:4.10.1250.10 232 276 4.2E-27 T 01-11-2018 D3790_10720 c44cf664cda4327e29612587dbb2e0fd 365 Gene3D G3DSA:3.30.70.1400 51 138 2.5E-86 T 01-11-2018 D3790_10720 c44cf664cda4327e29612587dbb2e0fd 365 SUPERFAMILY SSF103025 3 277 5.97E-91 T 01-11-2018 D3790_10720 c44cf664cda4327e29612587dbb2e0fd 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 358 8.3E-149 T 01-11-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 D3790_10720 c44cf664cda4327e29612587dbb2e0fd 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 353 2.8E-17 T 01-11-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 D3790_10720 c44cf664cda4327e29612587dbb2e0fd 365 SUPERFAMILY SSF101790 271 359 1.55E-24 T 01-11-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal D3790_10720 c44cf664cda4327e29612587dbb2e0fd 365 Gene3D G3DSA:2.40.30.110 277 365 5.2E-32 T 01-11-2018 D3790_10720 c44cf664cda4327e29612587dbb2e0fd 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 5.2E-81 T 01-11-2018 IPR006222 Aminomethyltransferase, folate-binding domain D3790_10720 c44cf664cda4327e29612587dbb2e0fd 365 Gene3D G3DSA:3.30.1360.120 6 231 2.5E-86 T 01-11-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 D3790_16265 fe9d8293e14d7b87dd850b7bc5edad58 342 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 340 1.8E-16 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_16265 fe9d8293e14d7b87dd850b7bc5edad58 342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 283 293 6.7E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_16265 fe9d8293e14d7b87dd850b7bc5edad58 342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 265 279 6.7E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_16265 fe9d8293e14d7b87dd850b7bc5edad58 342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 301 319 6.7E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_16265 fe9d8293e14d7b87dd850b7bc5edad58 342 SMART SM00388 125 185 3.1E-11 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_16265 fe9d8293e14d7b87dd850b7bc5edad58 342 Gene3D G3DSA:3.30.565.10 187 342 1.3E-30 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_16265 fe9d8293e14d7b87dd850b7bc5edad58 342 Gene3D G3DSA:1.10.287.130 75 180 3.8E-21 T 01-11-2018 D3790_16265 fe9d8293e14d7b87dd850b7bc5edad58 342 SMART SM00387 230 341 3.8E-23 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_16265 fe9d8293e14d7b87dd850b7bc5edad58 342 SMART SM00304 72 124 3.5E-5 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D3790_16265 fe9d8293e14d7b87dd850b7bc5edad58 342 Pfam PF00512 His Kinase A (phospho-acceptor) domain 129 184 6.2E-11 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_16265 fe9d8293e14d7b87dd850b7bc5edad58 342 SUPERFAMILY SSF47384 109 183 1.02E-12 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D3790_16265 fe9d8293e14d7b87dd850b7bc5edad58 342 SUPERFAMILY SSF55874 184 340 1.07E-29 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_13990 c00d1947f47b030cd861f24890b907d8 616 Pfam PF00920 Dehydratase family 34 607 9.1E-215 T 01-11-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D3790_13990 c00d1947f47b030cd861f24890b907d8 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 01-11-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D3790_13990 c00d1947f47b030cd861f24890b907d8 616 Gene3D G3DSA:3.50.30.80 421 572 1.7E-54 T 01-11-2018 D3790_13990 c00d1947f47b030cd861f24890b907d8 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 01-11-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D3790_13990 c00d1947f47b030cd861f24890b907d8 616 SUPERFAMILY SSF143975 3 420 3.14E-130 T 01-11-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D3790_13990 c00d1947f47b030cd861f24890b907d8 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 1.0E-260 T 01-11-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D3790_13990 c00d1947f47b030cd861f24890b907d8 616 SUPERFAMILY SSF52016 421 611 1.02E-58 T 01-11-2018 D3790_13990 c00d1947f47b030cd861f24890b907d8 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 44.546 T 01-11-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D3790_16270 b008a2bb1f9d228711fe7f5b3842b41c 239 SMART SM00448 5 116 4.8E-45 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_16270 b008a2bb1f9d228711fe7f5b3842b41c 239 SUPERFAMILY SSF46894 133 234 2.3E-25 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D3790_16270 b008a2bb1f9d228711fe7f5b3842b41c 239 Gene3D G3DSA:3.40.50.2300 1 126 4.6E-40 T 01-11-2018 D3790_16270 b008a2bb1f9d228711fe7f5b3842b41c 239 Gene3D G3DSA:1.10.10.10 130 239 4.5E-37 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_16270 b008a2bb1f9d228711fe7f5b3842b41c 239 SMART SM00862 156 232 4.6E-22 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D3790_16270 b008a2bb1f9d228711fe7f5b3842b41c 239 SUPERFAMILY SSF52172 3 127 1.57E-42 T 01-11-2018 IPR011006 CheY-like superfamily D3790_16270 b008a2bb1f9d228711fe7f5b3842b41c 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.3E-21 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D3790_16270 b008a2bb1f9d228711fe7f5b3842b41c 239 Pfam PF00072 Response regulator receiver domain 7 116 6.3E-30 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_06125 6a37b29299d53589146d7804a85906f6 339 PIRSF PIRSF001220 1 334 5.8E-93 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 D3790_06125 6a37b29299d53589146d7804a85906f6 339 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 01-11-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 D3790_06125 6a37b29299d53589146d7804a85906f6 339 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 01-11-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 D3790_06125 6a37b29299d53589146d7804a85906f6 339 PIRSF PIRSF500176 2 332 1.4E-109 T 01-11-2018 D3790_06125 6a37b29299d53589146d7804a85906f6 339 SMART SM00870 5 323 1.4E-133 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 D3790_06125 6a37b29299d53589146d7804a85906f6 339 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 1.0E-119 T 01-11-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 D3790_06125 6a37b29299d53589146d7804a85906f6 339 Pfam PF00710 Asparaginase, N-terminal 6 191 2.5E-63 T 01-11-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 D3790_06125 6a37b29299d53589146d7804a85906f6 339 Gene3D G3DSA:3.40.50.40 209 339 1.7E-43 T 01-11-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 D3790_06125 6a37b29299d53589146d7804a85906f6 339 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 1.7E-17 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 D3790_06125 6a37b29299d53589146d7804a85906f6 339 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 1.7E-17 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 D3790_06125 6a37b29299d53589146d7804a85906f6 339 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 1.7E-17 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 D3790_06125 6a37b29299d53589146d7804a85906f6 339 Gene3D G3DSA:3.40.50.1170 1 208 5.6E-89 T 01-11-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 D3790_06125 6a37b29299d53589146d7804a85906f6 339 SUPERFAMILY SSF53774 3 335 1.83E-109 T 01-11-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 D3790_03420 04e2238c21c5d58cb73ec8df06d97b55 314 SUPERFAMILY SSF53756 139 248 4.87E-6 T 01-11-2018 D3790_03420 04e2238c21c5d58cb73ec8df06d97b55 314 Gene3D G3DSA:3.40.50.2000 122 259 2.5E-28 T 01-11-2018 D3790_15475 4dbe6bf0d43063403062d9dcdf8fa631 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 21.098 T 01-11-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15475 4dbe6bf0d43063403062d9dcdf8fa631 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 90 134 1.3E-11 T 01-11-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain D3790_15475 4dbe6bf0d43063403062d9dcdf8fa631 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 7.8E-28 T 01-11-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15475 4dbe6bf0d43063403062d9dcdf8fa631 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 1.0E-36 T 01-11-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15475 4dbe6bf0d43063403062d9dcdf8fa631 140 SUPERFAMILY SSF46604 89 138 1.78E-15 T 01-11-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15475 4dbe6bf0d43063403062d9dcdf8fa631 140 Gene3D G3DSA:1.20.5.440 92 135 2.3E-18 T 01-11-2018 D3790_15475 4dbe6bf0d43063403062d9dcdf8fa631 140 SUPERFAMILY SSF51344 4 87 8.24E-24 T 01-11-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15475 4dbe6bf0d43063403062d9dcdf8fa631 140 Gene3D G3DSA:2.60.15.10 4 91 3.6E-31 T 01-11-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15475 4dbe6bf0d43063403062d9dcdf8fa631 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 1.1E-44 T 01-11-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 Gene3D G3DSA:3.30.300.30 723 802 1.3E-12 T 01-11-2018 D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 Gene3D G3DSA:3.30.300.30 1150 1244 3.5E-11 T 01-11-2018 D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 Gene3D G3DSA:3.40.50.150 826 1010 1.7E-30 T 01-11-2018 D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 SUPERFAMILY SSF52777 69 293 1.67E-34 T 01-11-2018 D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 Gene3D G3DSA:3.40.50.12780 328 722 1.6E-133 T 01-11-2018 D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 Pfam PF00501 AMP-binding enzyme 335 729 3.5E-102 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 PIRSF PIRSF001617 1187 1347 4.6E-26 T 01-11-2018 D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 PIRSF PIRSF001617 458 808 2.7E-25 T 01-11-2018 D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 PIRSF PIRSF001617 69 445 7.3E-26 T 01-11-2018 D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 Pfam PF00668 Condensation domain 57 292 1.7E-26 T 01-11-2018 IPR001242 Condensation domain D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 SUPERFAMILY SSF53335 823 971 7.69E-26 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1279 1294 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 ProSitePatterns PS00455 Putative AMP-binding domain signature. 482 493 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 Gene3D G3DSA:3.30.559.30 65 291 1.3E-48 T 01-11-2018 D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 Pfam PF00550 Phosphopantetheine attachment site 1256 1319 4.4E-15 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 SUPERFAMILY SSF56801 299 1268 2.75E-148 T 01-11-2018 D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 Pfam PF13847 Methyltransferase domain 856 976 1.6E-12 T 01-11-2018 IPR025714 Methyltransferase domain D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 Gene3D G3DSA:3.30.559.10 58 239 1.3E-48 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 SUPERFAMILY SSF47336 1247 1320 2.88E-20 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 PRINTS PR00154 AMP-binding signature 477 488 9.5E-5 T 01-11-2018 IPR020459 AMP-binding D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 PRINTS PR00154 AMP-binding signature 489 497 9.5E-5 T 01-11-2018 IPR020459 AMP-binding D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 Gene3D G3DSA:1.10.1200.10 1245 1323 1.9E-26 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06740 6d6b7c0bdf36dcd75a175586d617f554 1347 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 356 753 1.8E-130 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_09965 6700b826e30ad562205cddf21dfd1bb1 589 Pfam PF00664 ABC transporter transmembrane region 26 292 6.2E-37 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D3790_09965 6700b826e30ad562205cddf21dfd1bb1 589 SMART SM00382 376 561 1.6E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_09965 6700b826e30ad562205cddf21dfd1bb1 589 SUPERFAMILY SSF52540 363 583 1.12E-60 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09965 6700b826e30ad562205cddf21dfd1bb1 589 Gene3D G3DSA:3.40.50.300 341 587 9.1E-64 T 01-11-2018 D3790_09965 6700b826e30ad562205cddf21dfd1bb1 589 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 556 3.2E-190 T 01-11-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 D3790_09965 6700b826e30ad562205cddf21dfd1bb1 589 SUPERFAMILY SSF90123 8 329 2.09E-51 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_09965 6700b826e30ad562205cddf21dfd1bb1 589 Pfam PF00005 ABC transporter 370 514 4.0E-25 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_09965 6700b826e30ad562205cddf21dfd1bb1 589 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_09965 6700b826e30ad562205cddf21dfd1bb1 589 Gene3D G3DSA:1.20.1560.10 2 335 9.1E-46 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_17915 0c78e8fed38564030c00e0a12bd1f327 100 Gene3D G3DSA:1.10.3230.30 2 98 4.9E-13 T 01-11-2018 D3790_17915 0c78e8fed38564030c00e0a12bd1f327 100 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 8 98 3.8E-22 T 01-11-2018 IPR006450 Phage protein of unkonwn function D3790_17915 0c78e8fed38564030c00e0a12bd1f327 100 Pfam PF05135 Phage gp6-like head-tail connector protein 8 95 9.3E-16 T 01-11-2018 IPR021146 Phage gp6-like head-tail connector protein D3790_09050 8bf06ab2f96eb80fc954b830dfdb6ce1 516 PIRSF PIRSF007056 2 516 3.0E-220 T 01-11-2018 IPR012036 Bacteriophage Mu, Gp28 D3790_09050 8bf06ab2f96eb80fc954b830dfdb6ce1 516 Pfam PF03237 Terminase-like family 43 268 8.1E-7 T 01-11-2018 IPR004921 Terminase large subunit, T4likevirus-type D3790_09050 8bf06ab2f96eb80fc954b830dfdb6ce1 516 Gene3D G3DSA:3.40.50.300 16 205 8.7E-30 T 01-11-2018 D3790_09050 8bf06ab2f96eb80fc954b830dfdb6ce1 516 Gene3D G3DSA:3.30.420.240 301 477 4.7E-6 T 01-11-2018 D3790_16665 ceb0acdba6bdcefdbe558b822c137c92 469 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 62 428 8.0E-133 T 01-11-2018 IPR030931 Group II intron reverse transcriptase/maturase D3790_16665 ceb0acdba6bdcefdbe558b822c137c92 469 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 180 198 5.5E-7 T 01-11-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D3790_16665 ceb0acdba6bdcefdbe558b822c137c92 469 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 113 126 5.5E-7 T 01-11-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D3790_16665 ceb0acdba6bdcefdbe558b822c137c92 469 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 271 282 5.5E-7 T 01-11-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D3790_16665 ceb0acdba6bdcefdbe558b822c137c92 469 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 239 252 5.5E-7 T 01-11-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D3790_16665 ceb0acdba6bdcefdbe558b822c137c92 469 Pfam PF08388 Group II intron, maturase-specific domain 364 437 9.8E-18 T 01-11-2018 IPR013597 Group II intron, maturase-specific D3790_16665 ceb0acdba6bdcefdbe558b822c137c92 469 SUPERFAMILY SSF56672 70 416 9.64E-60 T 01-11-2018 D3790_16665 ceb0acdba6bdcefdbe558b822c137c92 469 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 118 338 1.0E-48 T 01-11-2018 IPR000477 Reverse transcriptase domain D3790_03110 d423ecd640cc854fdc88c78646ae9547 342 Pfam PF01497 Periplasmic binding protein 61 299 1.5E-17 T 01-11-2018 IPR002491 ABC transporter periplasmic binding domain D3790_03110 d423ecd640cc854fdc88c78646ae9547 342 SUPERFAMILY SSF53807 55 332 6.45E-44 T 01-11-2018 D3790_03110 d423ecd640cc854fdc88c78646ae9547 342 Gene3D G3DSA:3.40.50.1980 178 339 4.8E-36 T 01-11-2018 D3790_03110 d423ecd640cc854fdc88c78646ae9547 342 Gene3D G3DSA:3.40.50.1980 40 175 6.1E-35 T 01-11-2018 D3790_06750 27291434f8d85e97118575110aa5874f 181 Gene3D G3DSA:3.40.50.300 1 175 3.7E-12 T 01-11-2018 D3790_06750 27291434f8d85e97118575110aa5874f 181 Pfam PF13671 AAA domain 3 85 3.4E-6 T 01-11-2018 D3790_06750 27291434f8d85e97118575110aa5874f 181 SUPERFAMILY SSF52540 1 167 1.41E-12 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05610 9062a4be0771940b7ac4198e170fd63c 571 SUPERFAMILY SSF53850 54 555 1.3E-131 T 01-11-2018 D3790_05610 9062a4be0771940b7ac4198e170fd63c 571 PIRSF PIRSF002741 9 559 4.2E-94 T 01-11-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 D3790_05610 9062a4be0771940b7ac4198e170fd63c 571 Gene3D G3DSA:3.90.76.10 64 236 2.0E-141 T 01-11-2018 D3790_05610 9062a4be0771940b7ac4198e170fd63c 571 Gene3D G3DSA:3.40.190.10 237 545 2.0E-141 T 01-11-2018 D3790_05610 9062a4be0771940b7ac4198e170fd63c 571 Gene3D G3DSA:3.10.105.10 316 533 2.0E-141 T 01-11-2018 D3790_05610 9062a4be0771940b7ac4198e170fd63c 571 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 97 475 2.2E-87 T 01-11-2018 IPR000914 Solute-binding protein family 5 domain D3790_07790 053e4280343184355704277629797735 757 SUPERFAMILY SSF53383 142 609 4.03E-109 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_07790 053e4280343184355704277629797735 757 Gene3D G3DSA:3.40.640.10 142 442 4.4E-95 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_07790 053e4280343184355704277629797735 757 PIRSF PIRSF009393 3 757 3.9E-269 T 01-11-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 D3790_07790 053e4280343184355704277629797735 757 SUPERFAMILY SSF55904 612 757 2.62E-36 T 01-11-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 D3790_07790 053e4280343184355704277629797735 757 Gene3D G3DSA:3.90.100.10 633 757 2.9E-49 T 01-11-2018 D3790_07790 053e4280343184355704277629797735 757 Gene3D G3DSA:3.90.1150.10 443 632 1.8E-80 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_07790 053e4280343184355704277629797735 757 Gene3D G3DSA:3.40.50.2300 1 141 1.3E-39 T 01-11-2018 D3790_07790 053e4280343184355704277629797735 757 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 383 397 - T 01-11-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 D3790_07790 053e4280343184355704277629797735 757 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 21 136 4.8E-19 T 01-11-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 D3790_07790 053e4280343184355704277629797735 757 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 617 745 1.5E-46 T 01-11-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 D3790_07790 053e4280343184355704277629797735 757 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 142 592 1.9E-184 T 01-11-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 D3790_10230 b6ff381a5fb1f790c9ceab96ff448772 251 Pfam PF00899 ThiF family 13 246 1.6E-61 T 01-11-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 D3790_10230 b6ff381a5fb1f790c9ceab96ff448772 251 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 9 248 1.9E-123 T 01-11-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 D3790_10230 b6ff381a5fb1f790c9ceab96ff448772 251 Gene3D G3DSA:3.40.50.720 5 251 2.0E-87 T 01-11-2018 D3790_10230 b6ff381a5fb1f790c9ceab96ff448772 251 SUPERFAMILY SSF69572 4 248 3.14E-84 T 01-11-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 D3790_11750 b3361ba79144d5a2ad0a5ebf290cbeeb 508 SMART SM00471 63 282 4.4E-10 T 01-11-2018 IPR003607 HD/PDEase domain D3790_11750 b3361ba79144d5a2ad0a5ebf290cbeeb 508 Gene3D G3DSA:1.10.3410.10 263 393 1.5E-19 T 01-11-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 D3790_11750 b3361ba79144d5a2ad0a5ebf290cbeeb 508 Gene3D G3DSA:1.10.3210.10 164 262 8.7E-15 T 01-11-2018 D3790_11750 b3361ba79144d5a2ad0a5ebf290cbeeb 508 Pfam PF01966 HD domain 67 153 7.1E-10 T 01-11-2018 IPR006674 HD domain D3790_11750 b3361ba79144d5a2ad0a5ebf290cbeeb 508 Gene3D G3DSA:1.10.3210.10 1 163 7.3E-41 T 01-11-2018 D3790_11750 b3361ba79144d5a2ad0a5ebf290cbeeb 508 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 31 505 8.6E-120 T 01-11-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 D3790_11750 b3361ba79144d5a2ad0a5ebf290cbeeb 508 SUPERFAMILY SSF109604 25 506 1.2E-64 T 01-11-2018 D3790_11750 b3361ba79144d5a2ad0a5ebf290cbeeb 508 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 508 51.143 T 01-11-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 D3790_11750 b3361ba79144d5a2ad0a5ebf290cbeeb 508 Pfam PF13286 Phosphohydrolase-associated domain 381 503 1.4E-8 T 01-11-2018 IPR026875 Phosphohydrolase-associated domain D3790_09790 555565fca1e566e63c896f8d16939098 210 SMART SM00849 12 192 1.1E-37 T 01-11-2018 IPR001279 Metallo-beta-lactamase D3790_09790 555565fca1e566e63c896f8d16939098 210 SUPERFAMILY SSF56281 1 209 3.14E-59 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3790_09790 555565fca1e566e63c896f8d16939098 210 Pfam PF00753 Metallo-beta-lactamase superfamily 12 180 1.1E-29 T 01-11-2018 IPR001279 Metallo-beta-lactamase D3790_09790 555565fca1e566e63c896f8d16939098 210 Gene3D G3DSA:3.60.15.10 1 210 4.0E-80 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3790_13495 c11e15b895a07fe71bfb5c6effce679c 443 SUPERFAMILY SSF56176 344 431 4.91E-23 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 D3790_13495 c11e15b895a07fe71bfb5c6effce679c 443 SUPERFAMILY SSF54631 200 335 9.29E-19 T 01-11-2018 D3790_13495 c11e15b895a07fe71bfb5c6effce679c 443 Gene3D G3DSA:3.30.465.10 347 427 1.1E-28 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 D3790_13495 c11e15b895a07fe71bfb5c6effce679c 443 Pfam PF03471 Transporter associated domain 347 424 4.5E-22 T 01-11-2018 IPR005170 Transporter-associated domain D3790_13495 c11e15b895a07fe71bfb5c6effce679c 443 Pfam PF01595 Domain of unknown function DUF21 6 197 2.6E-38 T 01-11-2018 IPR002550 CNNM, transmembrane domain D3790_13495 c11e15b895a07fe71bfb5c6effce679c 443 SMART SM01091 346 426 3.4E-29 T 01-11-2018 IPR005170 Transporter-associated domain D3790_13495 c11e15b895a07fe71bfb5c6effce679c 443 Gene3D G3DSA:3.10.580.10 193 346 4.1E-33 T 01-11-2018 D3790_14530 f7b2c639db1c779d612d6bce742f3b4a 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.7 T 01-11-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 D3790_14530 f7b2c639db1c779d612d6bce742f3b4a 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 3.7E-86 T 01-11-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 D3790_14530 f7b2c639db1c779d612d6bce742f3b4a 176 PIRSF PIRSF039093 1 175 5.8E-88 T 01-11-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 D3790_14530 f7b2c639db1c779d612d6bce742f3b4a 176 SUPERFAMILY SSF56235 2 172 3.05E-58 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D3790_14530 f7b2c639db1c779d612d6bce742f3b4a 176 Gene3D G3DSA:3.60.20.10 1 173 1.7E-68 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D3790_14530 f7b2c639db1c779d612d6bce742f3b4a 176 Pfam PF00227 Proteasome subunit 2 169 9.2E-23 T 01-11-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 D3790_07600 af430805c9ea93daea692abb75a4b89b 433 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 16 212 3.6E-26 T 01-11-2018 D3790_07600 af430805c9ea93daea692abb75a4b89b 433 Gene3D G3DSA:3.50.50.60 11 277 1.6E-50 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_07600 af430805c9ea93daea692abb75a4b89b 433 TIGRFAM TIGR04046 MSMEG_0569_nitr: flavin-dependent oxidoreductase, MSMEG_0569 family 13 414 4.0E-203 T 01-11-2018 IPR024000 Conserved hypothetical protein CHP04046, FMN-dependent D3790_07600 af430805c9ea93daea692abb75a4b89b 433 SUPERFAMILY SSF51905 11 222 2.85E-34 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_07600 af430805c9ea93daea692abb75a4b89b 433 SUPERFAMILY SSF51905 177 388 3.63E-5 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_07600 af430805c9ea93daea692abb75a4b89b 433 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 4.6E-7 T 01-11-2018 D3790_07600 af430805c9ea93daea692abb75a4b89b 433 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 4.6E-7 T 01-11-2018 D3790_07600 af430805c9ea93daea692abb75a4b89b 433 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 4.6E-7 T 01-11-2018 D3790_07600 af430805c9ea93daea692abb75a4b89b 433 Gene3D G3DSA:3.50.50.60 278 426 3.0E-12 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_17125 62a32b98cfb85567e132c189e3814477 369 SMART SM00382 28 211 8.5E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_17125 62a32b98cfb85567e132c189e3814477 369 SUPERFAMILY SSF50331 236 363 1.77E-30 T 01-11-2018 IPR008995 Molybdate/tungstate binding, C-terminal D3790_17125 62a32b98cfb85567e132c189e3814477 369 Pfam PF08402 TOBE domain 281 353 8.5E-11 T 01-11-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 D3790_17125 62a32b98cfb85567e132c189e3814477 369 Gene3D G3DSA:2.40.50.140 288 345 3.4E-47 T 01-11-2018 D3790_17125 62a32b98cfb85567e132c189e3814477 369 Gene3D G3DSA:3.40.50.300 1 238 1.5E-76 T 01-11-2018 D3790_17125 62a32b98cfb85567e132c189e3814477 369 SUPERFAMILY SSF52540 4 243 2.79E-85 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_17125 62a32b98cfb85567e132c189e3814477 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_17125 62a32b98cfb85567e132c189e3814477 369 Gene3D G3DSA:2.40.50.100 240 362 3.4E-47 T 01-11-2018 D3790_17125 62a32b98cfb85567e132c189e3814477 369 Pfam PF00005 ABC transporter 20 161 5.9E-34 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_12570 495125558a36f2ae5de632f540e53377 156 SUPERFAMILY SSF46785 25 147 7.1E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_12570 495125558a36f2ae5de632f540e53377 156 SMART SM00347 32 132 3.0E-17 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_12570 495125558a36f2ae5de632f540e53377 156 Gene3D G3DSA:1.10.10.10 24 149 3.1E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_12570 495125558a36f2ae5de632f540e53377 156 Pfam PF01047 MarR family 39 96 2.5E-12 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_12570 495125558a36f2ae5de632f540e53377 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 2.0E-6 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_12570 495125558a36f2ae5de632f540e53377 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 2.0E-6 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_12570 495125558a36f2ae5de632f540e53377 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 72 2.0E-6 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_12570 495125558a36f2ae5de632f540e53377 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 2.0E-6 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 SUPERFAMILY SSF52317 4 204 2.55E-55 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 SUPERFAMILY SSF54810 405 525 3.27E-51 T 01-11-2018 D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 Gene3D G3DSA:3.40.50.880 9 206 4.0E-56 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 525 1.6E-152 T 01-11-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 Pfam PF02540 NAD synthase 223 254 1.9E-4 T 01-11-2018 IPR022310 NAD/GMP synthase D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 1.3E-83 T 01-11-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 Pfam PF00117 Glutamine amidotransferase class-I 12 200 2.1E-40 T 01-11-2018 IPR017926 Glutamine amidotransferase D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 SUPERFAMILY SSF52402 193 446 7.72E-56 T 01-11-2018 D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 6.3E-6 T 01-11-2018 D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 6.3E-6 T 01-11-2018 D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 6.3E-6 T 01-11-2018 D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 Gene3D G3DSA:3.40.50.620 209 405 4.1E-72 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.3E-7 T 01-11-2018 D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.3E-7 T 01-11-2018 D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.3E-7 T 01-11-2018 D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.9E-6 T 01-11-2018 D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.9E-6 T 01-11-2018 D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 1.9E-6 T 01-11-2018 D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 Pfam PF00958 GMP synthase C terminal domain 433 524 9.8E-44 T 01-11-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 55.891 T 01-11-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 D3790_08625 5a5c3a00d6f331d237378d96ff71f0f4 525 Gene3D G3DSA:3.30.300.10 406 525 2.6E-51 T 01-11-2018 D3790_00860 00d77ea3fc32d58d0a6299ebd96fe989 695 SUPERFAMILY SSF69349 526 693 4.08E-36 T 01-11-2018 D3790_00860 00d77ea3fc32d58d0a6299ebd96fe989 695 SUPERFAMILY SSF69279 276 449 1.68E-41 T 01-11-2018 D3790_00860 00d77ea3fc32d58d0a6299ebd96fe989 695 SUPERFAMILY SSF69279 98 271 8.08E-57 T 01-11-2018 D3790_00860 00d77ea3fc32d58d0a6299ebd96fe989 695 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 108 587 1.0E-164 T 01-11-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein D3790_00860 00d77ea3fc32d58d0a6299ebd96fe989 695 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 95 605 5.6E-198 T 01-11-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset D3790_00860 00d77ea3fc32d58d0a6299ebd96fe989 695 Gene3D G3DSA:3.30.1920.30 307 370 1.4E-94 T 01-11-2018 D3790_00860 00d77ea3fc32d58d0a6299ebd96fe989 695 Gene3D G3DSA:2.40.50.230 441 540 5.8E-42 T 01-11-2018 IPR037026 Vgr protein, OB-fold domain superfamily D3790_00860 00d77ea3fc32d58d0a6299ebd96fe989 695 Pfam PF05954 Phage late control gene D protein (GPD) 115 414 3.6E-87 T 01-11-2018 D3790_00860 00d77ea3fc32d58d0a6299ebd96fe989 695 Gene3D G3DSA:2.30.110.50 105 414 1.4E-94 T 01-11-2018 D3790_00860 00d77ea3fc32d58d0a6299ebd96fe989 695 SUPERFAMILY SSF69255 448 535 4.45E-34 T 01-11-2018 D3790_00860 00d77ea3fc32d58d0a6299ebd96fe989 695 Gene3D G3DSA:3.55.50.10 184 275 1.4E-94 T 01-11-2018 D3790_12580 50735c92058254cace8461f0824dddb8 1469 Gene3D G3DSA:3.30.559.10 27 392 2.9E-84 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_12580 50735c92058254cace8461f0824dddb8 1469 Pfam PF00550 Phosphopantetheine attachment site 996 1055 1.9E-10 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_12580 50735c92058254cace8461f0824dddb8 1469 SUPERFAMILY SSF52777 210 436 5.89E-38 T 01-11-2018 D3790_12580 50735c92058254cace8461f0824dddb8 1469 SUPERFAMILY SSF51735 1099 1357 4.17E-32 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_12580 50735c92058254cace8461f0824dddb8 1469 Pfam PF00501 AMP-binding enzyme 482 880 1.5E-68 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_12580 50735c92058254cace8461f0824dddb8 1469 Gene3D G3DSA:3.40.50.12780 469 874 1.2E-95 T 01-11-2018 D3790_12580 50735c92058254cace8461f0824dddb8 1469 ProSitePatterns PS00455 Putative AMP-binding domain signature. 620 631 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_12580 50735c92058254cace8461f0824dddb8 1469 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 1099 1453 2.0E-89 T 01-11-2018 IPR010080 Thioester reductase-like domain D3790_12580 50735c92058254cace8461f0824dddb8 1469 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 502 904 7.8E-101 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_12580 50735c92058254cace8461f0824dddb8 1469 Pfam PF07993 Male sterility protein 1101 1337 2.2E-59 T 01-11-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 D3790_12580 50735c92058254cace8461f0824dddb8 1469 SUPERFAMILY SSF52777 29 199 8.89E-33 T 01-11-2018 D3790_12580 50735c92058254cace8461f0824dddb8 1469 Gene3D G3DSA:3.30.559.30 203 434 2.9E-84 T 01-11-2018 D3790_12580 50735c92058254cace8461f0824dddb8 1469 PIRSF PIRSF001617 595 931 6.6E-11 T 01-11-2018 D3790_12580 50735c92058254cace8461f0824dddb8 1469 PIRSF PIRSF001617 926 1418 2.4E-83 T 01-11-2018 D3790_12580 50735c92058254cace8461f0824dddb8 1469 PIRSF PIRSF001617 207 613 2.5E-13 T 01-11-2018 D3790_12580 50735c92058254cace8461f0824dddb8 1469 SUPERFAMILY SSF56801 459 1003 9.94E-119 T 01-11-2018 D3790_12580 50735c92058254cace8461f0824dddb8 1469 Pfam PF00668 Condensation domain 24 459 9.5E-73 T 01-11-2018 IPR001242 Condensation domain D3790_12580 50735c92058254cace8461f0824dddb8 1469 Gene3D G3DSA:3.30.300.30 875 976 2.6E-28 T 01-11-2018 D3790_12580 50735c92058254cace8461f0824dddb8 1469 Gene3D G3DSA:3.40.50.720 1074 1459 2.9E-82 T 01-11-2018 D3790_12580 50735c92058254cace8461f0824dddb8 1469 Pfam PF13193 AMP-binding enzyme C-terminal domain 888 961 1.9E-10 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_12580 50735c92058254cace8461f0824dddb8 1469 SUPERFAMILY SSF47336 988 1057 3.66E-15 T 01-11-2018 IPR036736 ACP-like superfamily D3790_12580 50735c92058254cace8461f0824dddb8 1469 Gene3D G3DSA:1.10.1200.10 990 1063 6.5E-19 T 01-11-2018 IPR036736 ACP-like superfamily D3790_13780 e396d12b83b260689dc97d5a2614d5f4 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 316 4.4E-102 T 01-11-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 D3790_13780 e396d12b83b260689dc97d5a2614d5f4 316 Gene3D G3DSA:1.20.58.340 240 316 4.6E-25 T 01-11-2018 D3790_13780 e396d12b83b260689dc97d5a2614d5f4 316 Pfam PF01544 CorA-like Mg2+ transporter protein 27 312 8.5E-49 T 01-11-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 D3790_13780 e396d12b83b260689dc97d5a2614d5f4 316 SUPERFAMILY SSF144083 251 314 3.66E-20 T 01-11-2018 D3790_13780 e396d12b83b260689dc97d5a2614d5f4 316 SUPERFAMILY SSF143865 1 255 4.18E-33 T 01-11-2018 D3790_19110 cf127448d746a2ca6d1ca370eb6fcfd4 480 Gene3D G3DSA:2.40.30.10 337 440 4.6E-28 T 01-11-2018 D3790_19110 cf127448d746a2ca6d1ca370eb6fcfd4 480 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 33 439 1.6E-194 T 01-11-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 D3790_19110 cf127448d746a2ca6d1ca370eb6fcfd4 480 SUPERFAMILY SSF50465 340 440 6.71E-27 T 01-11-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal D3790_19110 cf127448d746a2ca6d1ca370eb6fcfd4 480 SUPERFAMILY SSF52540 27 241 1.23E-57 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_19110 cf127448d746a2ca6d1ca370eb6fcfd4 480 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 88 103 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site D3790_19110 cf127448d746a2ca6d1ca370eb6fcfd4 480 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 24 480 52.01 T 01-11-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 D3790_19110 cf127448d746a2ca6d1ca370eb6fcfd4 480 Gene3D G3DSA:3.40.50.300 12 245 7.8E-70 T 01-11-2018 D3790_19110 cf127448d746a2ca6d1ca370eb6fcfd4 480 SUPERFAMILY SSF50447 248 334 7.51E-22 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily D3790_19110 cf127448d746a2ca6d1ca370eb6fcfd4 480 PRINTS PR00315 GTP-binding elongation factor signature 34 47 3.3E-13 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_19110 cf127448d746a2ca6d1ca370eb6fcfd4 480 PRINTS PR00315 GTP-binding elongation factor signature 131 142 3.3E-13 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_19110 cf127448d746a2ca6d1ca370eb6fcfd4 480 PRINTS PR00315 GTP-binding elongation factor signature 95 103 3.3E-13 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_19110 cf127448d746a2ca6d1ca370eb6fcfd4 480 PRINTS PR00315 GTP-binding elongation factor signature 115 125 3.3E-13 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_19110 cf127448d746a2ca6d1ca370eb6fcfd4 480 PRINTS PR00315 GTP-binding elongation factor signature 168 177 3.3E-13 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_19110 cf127448d746a2ca6d1ca370eb6fcfd4 480 Pfam PF00009 Elongation factor Tu GTP binding domain 33 232 2.7E-42 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_19110 cf127448d746a2ca6d1ca370eb6fcfd4 480 Gene3D G3DSA:2.40.30.10 247 334 3.8E-22 T 01-11-2018 D3790_19110 cf127448d746a2ca6d1ca370eb6fcfd4 480 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 39 219 9.3E-14 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D3790_01515 a3ffa50b772ebb19d7008af0619104a9 337 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 44.604 T 01-11-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 D3790_01515 a3ffa50b772ebb19d7008af0619104a9 337 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D3790_01515 a3ffa50b772ebb19d7008af0619104a9 337 SUPERFAMILY SSF53335 151 320 1.06E-27 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_01515 a3ffa50b772ebb19d7008af0619104a9 337 Gene3D G3DSA:3.40.50.150 159 337 1.3E-44 T 01-11-2018 D3790_01515 a3ffa50b772ebb19d7008af0619104a9 337 Pfam PF05175 Methyltransferase small domain 167 333 5.4E-59 T 01-11-2018 IPR007848 Methyltransferase small domain GO:0008168 D3790_01515 a3ffa50b772ebb19d7008af0619104a9 337 Gene3D G3DSA:3.40.50.150 1 158 4.1E-54 T 01-11-2018 D3790_01515 a3ffa50b772ebb19d7008af0619104a9 337 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 1.0E-54 T 01-11-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 D3790_05020 111ece508d9a797288b028cd74cfaa31 377 Pfam PF01497 Periplasmic binding protein 100 321 3.8E-19 T 01-11-2018 IPR002491 ABC transporter periplasmic binding domain D3790_05020 111ece508d9a797288b028cd74cfaa31 377 Gene3D G3DSA:3.40.50.1980 31 376 9.3E-105 T 01-11-2018 D3790_05020 111ece508d9a797288b028cd74cfaa31 377 SUPERFAMILY SSF53807 34 367 9.81E-50 T 01-11-2018 D3790_05170 ad40f701fbe0dc8ca88e14ce64b94f11 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 5.3E-66 T 01-11-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 D3790_05170 ad40f701fbe0dc8ca88e14ce64b94f11 209 SUPERFAMILY SSF52540 1 207 1.03E-56 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05170 ad40f701fbe0dc8ca88e14ce64b94f11 209 Gene3D G3DSA:3.40.50.300 1 208 1.1E-64 T 01-11-2018 D3790_05170 ad40f701fbe0dc8ca88e14ce64b94f11 209 Pfam PF02223 Thymidylate kinase 8 198 6.6E-60 T 01-11-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 D3790_05170 ad40f701fbe0dc8ca88e14ce64b94f11 209 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 28.617 T 01-11-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 D3790_05170 ad40f701fbe0dc8ca88e14ce64b94f11 209 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 01-11-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 D3790_06080 82978acc614e5d5bbb8cb0205b309a78 355 SUPERFAMILY SSF51419 9 230 3.6E-60 T 01-11-2018 IPR029066 PLP-binding barrel D3790_06080 82978acc614e5d5bbb8cb0205b309a78 355 Pfam PF01168 Alanine racemase, N-terminal domain 9 216 1.4E-60 T 01-11-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_06080 82978acc614e5d5bbb8cb0205b309a78 355 Hamap MF_01201 Alanine racemase. 2 355 33.164 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_06080 82978acc614e5d5bbb8cb0205b309a78 355 TIGRFAM TIGR00492 alr: alanine racemase 4 353 8.5E-117 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_06080 82978acc614e5d5bbb8cb0205b309a78 355 Gene3D G3DSA:2.40.37.10 9 350 5.8E-111 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D3790_06080 82978acc614e5d5bbb8cb0205b309a78 355 SUPERFAMILY SSF50621 225 353 6.63E-46 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D3790_06080 82978acc614e5d5bbb8cb0205b309a78 355 PRINTS PR00992 Alanine racemase signature 189 216 3.3E-70 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_06080 82978acc614e5d5bbb8cb0205b309a78 355 PRINTS PR00992 Alanine racemase signature 247 262 3.3E-70 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_06080 82978acc614e5d5bbb8cb0205b309a78 355 PRINTS PR00992 Alanine racemase signature 27 43 3.3E-70 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_06080 82978acc614e5d5bbb8cb0205b309a78 355 PRINTS PR00992 Alanine racemase signature 285 302 3.3E-70 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_06080 82978acc614e5d5bbb8cb0205b309a78 355 PRINTS PR00992 Alanine racemase signature 121 133 3.3E-70 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_06080 82978acc614e5d5bbb8cb0205b309a78 355 PRINTS PR00992 Alanine racemase signature 155 166 3.3E-70 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_06080 82978acc614e5d5bbb8cb0205b309a78 355 PRINTS PR00992 Alanine racemase signature 264 279 3.3E-70 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_06080 82978acc614e5d5bbb8cb0205b309a78 355 PRINTS PR00992 Alanine racemase signature 337 350 3.3E-70 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_06080 82978acc614e5d5bbb8cb0205b309a78 355 PRINTS PR00992 Alanine racemase signature 61 79 3.3E-70 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_06080 82978acc614e5d5bbb8cb0205b309a78 355 Pfam PF00842 Alanine racemase, C-terminal domain 232 353 7.2E-42 T 01-11-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_06080 82978acc614e5d5bbb8cb0205b309a78 355 Gene3D G3DSA:3.20.20.10 11 214 5.8E-111 T 01-11-2018 IPR029066 PLP-binding barrel D3790_06080 82978acc614e5d5bbb8cb0205b309a78 355 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 01-11-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_06080 82978acc614e5d5bbb8cb0205b309a78 355 SMART SM01005 231 355 1.4E-66 T 01-11-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_05615 fc8ca20e61b7dbc036265a4706714375 339 SUPERFAMILY SSF52540 10 247 1.33E-63 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05615 fc8ca20e61b7dbc036265a4706714375 339 Pfam PF00158 Sigma-54 interaction domain 9 170 1.3E-60 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D3790_05615 fc8ca20e61b7dbc036265a4706714375 339 Pfam PF02954 Bacterial regulatory protein, Fis family 293 325 1.0E-5 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D3790_05615 fc8ca20e61b7dbc036265a4706714375 339 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3790_05615 fc8ca20e61b7dbc036265a4706714375 339 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site D3790_05615 fc8ca20e61b7dbc036265a4706714375 339 Gene3D G3DSA:3.40.50.300 2 179 1.1E-57 T 01-11-2018 D3790_05615 fc8ca20e61b7dbc036265a4706714375 339 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 331 2.8E-158 T 01-11-2018 IPR014317 Transcription activator PspF D3790_05615 fc8ca20e61b7dbc036265a4706714375 339 Gene3D G3DSA:1.10.10.60 273 336 1.2E-8 T 01-11-2018 D3790_05615 fc8ca20e61b7dbc036265a4706714375 339 SUPERFAMILY SSF46689 222 333 2.37E-6 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_05615 fc8ca20e61b7dbc036265a4706714375 339 Gene3D G3DSA:1.10.8.60 180 262 5.1E-27 T 01-11-2018 D3790_05615 fc8ca20e61b7dbc036265a4706714375 339 SMART SM00382 28 180 2.4E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_19545 3033d34245bd2dc83b9d9296b49eb39f 461 Gene3D G3DSA:3.30.230.10 310 460 1.9E-20 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3790_19545 3033d34245bd2dc83b9d9296b49eb39f 461 SMART SM00382 93 246 1.3E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_19545 3033d34245bd2dc83b9d9296b49eb39f 461 Pfam PF13481 AAA domain 87 224 1.4E-14 T 01-11-2018 D3790_19545 3033d34245bd2dc83b9d9296b49eb39f 461 SUPERFAMILY SSF52540 70 289 1.3E-48 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_19545 3033d34245bd2dc83b9d9296b49eb39f 461 Gene3D G3DSA:3.40.50.300 68 281 2.7E-40 T 01-11-2018 D3790_19545 3033d34245bd2dc83b9d9296b49eb39f 461 SUPERFAMILY SSF54211 257 456 1.25E-41 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_19545 3033d34245bd2dc83b9d9296b49eb39f 461 PRINTS PR01874 DNA repair protein radA signature 215 243 9.3E-94 T 01-11-2018 D3790_19545 3033d34245bd2dc83b9d9296b49eb39f 461 PRINTS PR01874 DNA repair protein radA signature 85 113 9.3E-94 T 01-11-2018 D3790_19545 3033d34245bd2dc83b9d9296b49eb39f 461 PRINTS PR01874 DNA repair protein radA signature 324 347 9.3E-94 T 01-11-2018 D3790_19545 3033d34245bd2dc83b9d9296b49eb39f 461 PRINTS PR01874 DNA repair protein radA signature 11 35 9.3E-94 T 01-11-2018 D3790_19545 3033d34245bd2dc83b9d9296b49eb39f 461 PRINTS PR01874 DNA repair protein radA signature 176 200 9.3E-94 T 01-11-2018 D3790_19545 3033d34245bd2dc83b9d9296b49eb39f 461 PRINTS PR01874 DNA repair protein radA signature 250 276 9.3E-94 T 01-11-2018 D3790_19545 3033d34245bd2dc83b9d9296b49eb39f 461 PRINTS PR01874 DNA repair protein radA signature 126 143 9.3E-94 T 01-11-2018 D3790_19545 3033d34245bd2dc83b9d9296b49eb39f 461 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 2.2E-235 T 01-11-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 D3790_19545 3033d34245bd2dc83b9d9296b49eb39f 461 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 5.0E-9 T 01-11-2018 D3790_19545 3033d34245bd2dc83b9d9296b49eb39f 461 Hamap MF_01498 DNA repair protein RadA [radA]. 22 457 43.006 T 01-11-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 D3790_02455 1acc7b8fca37a83a2af1ca60783997e3 390 SMART SM00564 61 93 2.6E-4 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D3790_02455 1acc7b8fca37a83a2af1ca60783997e3 390 SMART SM00564 287 318 450.0 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D3790_02455 1acc7b8fca37a83a2af1ca60783997e3 390 SMART SM00564 249 280 7.5E-5 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D3790_02455 1acc7b8fca37a83a2af1ca60783997e3 390 SMART SM00564 113 144 0.0011 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D3790_02455 1acc7b8fca37a83a2af1ca60783997e3 390 SMART SM00564 153 184 0.086 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D3790_02455 1acc7b8fca37a83a2af1ca60783997e3 390 SMART SM00564 327 359 18.0 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D3790_02455 1acc7b8fca37a83a2af1ca60783997e3 390 SMART SM00564 198 229 33.0 T 01-11-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D3790_02455 1acc7b8fca37a83a2af1ca60783997e3 390 SUPERFAMILY SSF50998 28 382 3.81E-79 T 01-11-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily D3790_02455 1acc7b8fca37a83a2af1ca60783997e3 390 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 6 388 2.1E-130 T 01-11-2018 IPR017687 Outer membrane protein assembly factor BamB D3790_02455 1acc7b8fca37a83a2af1ca60783997e3 390 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 390 39.45 T 01-11-2018 IPR017687 Outer membrane protein assembly factor BamB D3790_02455 1acc7b8fca37a83a2af1ca60783997e3 390 Pfam PF13360 PQQ-like domain 75 317 5.5E-52 T 01-11-2018 IPR002372 Pyrrolo-quinoline quinone repeat D3790_02455 1acc7b8fca37a83a2af1ca60783997e3 390 Gene3D G3DSA:2.130.10.10 17 389 2.9E-96 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D3790_03305 fdf8baedc9bd66b6e49e17cbf64b03cc 476 Pfam PF04055 Radical SAM superfamily 153 327 1.4E-26 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D3790_03305 fdf8baedc9bd66b6e49e17cbf64b03cc 476 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 153 173 - T 01-11-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 D3790_03305 fdf8baedc9bd66b6e49e17cbf64b03cc 476 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 5 442 73.61 T 01-11-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 D3790_03305 fdf8baedc9bd66b6e49e17cbf64b03cc 476 SMART SM00729 149 369 9.9E-63 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D3790_03305 fdf8baedc9bd66b6e49e17cbf64b03cc 476 Gene3D G3DSA:3.80.30.20 147 379 4.2E-82 T 01-11-2018 IPR023404 Radical SAM, alpha/beta horseshoe D3790_03305 fdf8baedc9bd66b6e49e17cbf64b03cc 476 Gene3D G3DSA:3.40.50.12160 5 138 1.6E-32 T 01-11-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily D3790_03305 fdf8baedc9bd66b6e49e17cbf64b03cc 476 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 6 442 1.2E-208 T 01-11-2018 D3790_03305 fdf8baedc9bd66b6e49e17cbf64b03cc 476 Pfam PF00919 Uncharacterized protein family UPF0004 6 106 9.7E-29 T 01-11-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 D3790_03305 fdf8baedc9bd66b6e49e17cbf64b03cc 476 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 6 439 2.7E-154 T 01-11-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 D3790_03305 fdf8baedc9bd66b6e49e17cbf64b03cc 476 Pfam PF01938 TRAM domain 380 442 2.7E-19 T 01-11-2018 IPR002792 TRAM domain D3790_03305 fdf8baedc9bd66b6e49e17cbf64b03cc 476 SUPERFAMILY SSF102114 127 374 7.06E-63 T 01-11-2018 D3790_08370 bc91c6007ee5ae782660f358a9fab910 65 SUPERFAMILY SSF143034 2 64 1.44E-23 T 01-11-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_08370 bc91c6007ee5ae782660f358a9fab910 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 01-11-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_08370 bc91c6007ee5ae782660f358a9fab910 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.1E-23 T 01-11-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 D3790_08370 bc91c6007ee5ae782660f358a9fab910 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.1E-23 T 01-11-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 D3790_08370 bc91c6007ee5ae782660f358a9fab910 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.1E-23 T 01-11-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 D3790_08370 bc91c6007ee5ae782660f358a9fab910 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.1E-27 T 01-11-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 D3790_08370 bc91c6007ee5ae782660f358a9fab910 65 Pfam PF01632 Ribosomal protein L35 2 60 3.5E-24 T 01-11-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_08370 bc91c6007ee5ae782660f358a9fab910 65 Gene3D G3DSA:2.40.50.530 1 65 3.3E-20 T 01-11-2018 D3790_08370 bc91c6007ee5ae782660f358a9fab910 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.346 T 01-11-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 D3790_06515 68a0e8cb4669c661c66d1f99e0bbcf61 107 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 7 107 1.5E-36 T 01-11-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 D3790_06515 68a0e8cb4669c661c66d1f99e0bbcf61 107 SUPERFAMILY SSF55159 6 103 6.54E-26 T 01-11-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 D3790_06515 68a0e8cb4669c661c66d1f99e0bbcf61 107 PIRSF PIRSF037511 1 107 6.7E-34 T 01-11-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 D3790_06515 68a0e8cb4669c661c66d1f99e0bbcf61 107 Pfam PF01253 Translation initiation factor SUI1 31 100 7.8E-19 T 01-11-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 D3790_06515 68a0e8cb4669c661c66d1f99e0bbcf61 107 Gene3D G3DSA:3.30.780.10 27 107 3.7E-32 T 01-11-2018 D3790_01500 59df1d5f660c2fbede21006d1c722850 497 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 269 276 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 D3790_01500 59df1d5f660c2fbede21006d1c722850 497 SUPERFAMILY SSF53720 11 496 9.03E-157 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D3790_01500 59df1d5f660c2fbede21006d1c722850 497 Gene3D G3DSA:3.40.605.10 22 491 2.1E-169 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D3790_01500 59df1d5f660c2fbede21006d1c722850 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 297 308 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 D3790_01500 59df1d5f660c2fbede21006d1c722850 497 Gene3D G3DSA:3.40.309.10 274 463 2.1E-169 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D3790_01500 59df1d5f660c2fbede21006d1c722850 497 Pfam PF00171 Aldehyde dehydrogenase family 30 493 9.0E-157 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D3790_06780 b5491a2e9efb24597c90629f9fa3e4c1 435 SUPERFAMILY SSF53383 64 427 2.91E-47 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_06780 b5491a2e9efb24597c90629f9fa3e4c1 435 SUPERFAMILY SSF46785 9 79 1.17E-17 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_06780 b5491a2e9efb24597c90629f9fa3e4c1 435 Gene3D G3DSA:3.90.1150.10 90 417 8.2E-42 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_06780 b5491a2e9efb24597c90629f9fa3e4c1 435 Gene3D G3DSA:3.40.640.10 117 330 8.2E-42 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_06780 b5491a2e9efb24597c90629f9fa3e4c1 435 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 70 2.9E-17 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_06780 b5491a2e9efb24597c90629f9fa3e4c1 435 Pfam PF00155 Aminotransferase class I and II 117 425 7.3E-18 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D3790_06780 b5491a2e9efb24597c90629f9fa3e4c1 435 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 5.3E-6 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_06780 b5491a2e9efb24597c90629f9fa3e4c1 435 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 5.3E-6 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_06780 b5491a2e9efb24597c90629f9fa3e4c1 435 Gene3D G3DSA:1.10.10.10 2 79 7.2E-19 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_06780 b5491a2e9efb24597c90629f9fa3e4c1 435 SMART SM00345 11 70 1.1E-18 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_00900 7817880d4ccf90f9dbcbdc3b37b47e4b 70 Pfam PF13275 S4 domain 8 68 1.3E-25 T 01-11-2018 D3790_00900 7817880d4ccf90f9dbcbdc3b37b47e4b 70 Gene3D G3DSA:3.10.290.10 1 69 4.8E-27 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D3790_00900 7817880d4ccf90f9dbcbdc3b37b47e4b 70 SUPERFAMILY SSF55174 4 68 4.71E-20 T 01-11-2018 D3790_13965 30a840de3a5ce4563be825a6bd54b146 492 SUPERFAMILY SSF48179 210 370 4.42E-42 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D3790_13965 30a840de3a5ce4563be825a6bd54b146 492 Gene3D G3DSA:3.40.50.720 1 208 3.1E-85 T 01-11-2018 D3790_13965 30a840de3a5ce4563be825a6bd54b146 492 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.0E-58 T 01-11-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 D3790_13965 30a840de3a5ce4563be825a6bd54b146 492 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 3.3E-133 T 01-11-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 D3790_13965 30a840de3a5ce4563be825a6bd54b146 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 483 5.2E-20 T 01-11-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 D3790_13965 30a840de3a5ce4563be825a6bd54b146 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 3.9E-27 T 01-11-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 D3790_13965 30a840de3a5ce4563be825a6bd54b146 492 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 486 39.335 T 01-11-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 D3790_13965 30a840de3a5ce4563be825a6bd54b146 492 Gene3D G3DSA:1.10.1040.10 209 492 4.4E-124 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 D3790_13965 30a840de3a5ce4563be825a6bd54b146 492 SUPERFAMILY SSF51735 29 209 9.72E-58 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_13965 30a840de3a5ce4563be825a6bd54b146 492 SUPERFAMILY SSF48179 349 485 2.21E-39 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D3790_15415 d2a534b35e1d122d3b370c6a364b5389 153 Gene3D G3DSA:3.30.70.920 59 141 3.3E-34 T 01-11-2018 D3790_15415 d2a534b35e1d122d3b370c6a364b5389 153 Pfam PF01037 Lrp/AsnC ligand binding domain 77 144 1.0E-16 T 01-11-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain D3790_15415 d2a534b35e1d122d3b370c6a364b5389 153 SMART SM00344 7 114 8.1E-44 T 01-11-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 D3790_15415 d2a534b35e1d122d3b370c6a364b5389 153 SUPERFAMILY SSF46785 5 67 1.92E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_15415 d2a534b35e1d122d3b370c6a364b5389 153 Gene3D G3DSA:1.10.10.10 3 58 5.1E-25 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_15415 d2a534b35e1d122d3b370c6a364b5389 153 SUPERFAMILY SSF54909 68 153 6.17E-19 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel D3790_15415 d2a534b35e1d122d3b370c6a364b5389 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 54 3.1E-15 T 01-11-2018 D3790_15415 d2a534b35e1d122d3b370c6a364b5389 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 2.5E-13 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 D3790_15415 d2a534b35e1d122d3b370c6a364b5389 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 2.5E-13 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 D3790_15415 d2a534b35e1d122d3b370c6a364b5389 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 2.5E-13 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 D3790_15415 d2a534b35e1d122d3b370c6a364b5389 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 01-11-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site D3790_02585 0dd6e909810dde7f41af20b13d8dd511 346 Gene3D G3DSA:3.30.420.470 142 331 1.4E-10 T 01-11-2018 D3790_02585 0dd6e909810dde7f41af20b13d8dd511 346 SUPERFAMILY SSF46689 17 137 1.24E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_02585 0dd6e909810dde7f41af20b13d8dd511 346 Pfam PF13358 DDE superfamily endonuclease 177 310 2.0E-23 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_02585 0dd6e909810dde7f41af20b13d8dd511 346 Pfam PF13384 Homeodomain-like domain 28 72 1.4E-10 T 01-11-2018 D3790_02665 cdef553f87c1b00eacf1000e97403304 299 Pfam PF07395 Mig-14 35 294 9.7E-47 T 01-11-2018 IPR009977 Mig-14 D3790_02665 cdef553f87c1b00eacf1000e97403304 299 SUPERFAMILY SSF55729 143 289 6.89E-6 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 847 965 8.4E-38 T 01-11-2018 IPR014031 Beta-ketoacyl synthase, C-terminal D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 263 378 5.2E-37 T 01-11-2018 IPR014031 Beta-ketoacyl synthase, C-terminal D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2342 2458 3.5E-39 T 01-11-2018 IPR014031 Beta-ketoacyl synthase, C-terminal D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Gene3D G3DSA:1.10.1200.10 2995 3066 1.0E-9 T 01-11-2018 IPR036736 ACP-like superfamily D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Pfam PF08659 KR domain 1705 1900 6.1E-38 T 01-11-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Gene3D G3DSA:3.30.70.250 2733 2793 1.2E-115 T 01-11-2018 D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Gene3D G3DSA:3.30.70.250 1241 1301 3.3E-121 T 01-11-2018 D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 SUPERFAMILY SSF52151 1111 1407 9.42E-67 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3018 3033 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Gene3D G3DSA:3.40.366.10 2605 2903 1.2E-115 T 01-11-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 SUPERFAMILY SSF47336 1977 2100 9.29E-16 T 01-11-2018 IPR036736 ACP-like superfamily D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Gene3D G3DSA:3.40.47.10 9 485 1.7E-150 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 SUPERFAMILY SSF52151 2605 2887 5.75E-65 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 SMART SM00825 Beta-ketoacyl synthase 10 431 5.3E-146 T 01-11-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 SMART SM00825 Beta-ketoacyl synthase 2088 2511 1.2E-137 T 01-11-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 SMART SM00825 Beta-ketoacyl synthase 593 1017 1.5E-124 T 01-11-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 SUPERFAMILY SSF55048 1240 1301 4.71E-8 T 01-11-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Gene3D G3DSA:3.30.70.3290 2527 2929 1.2E-115 T 01-11-2018 D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Pfam PF00698 Acyl transferase domain 2607 2875 4.9E-47 T 01-11-2018 IPR014043 Acyl transferase D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Pfam PF00698 Acyl transferase domain 1112 1406 6.8E-44 T 01-11-2018 IPR014043 Acyl transferase D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 SUPERFAMILY SSF51735 1704 1948 7.46E-26 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Pfam PF00550 Phosphopantetheine attachment site 487 552 4.4E-9 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Pfam PF00550 Phosphopantetheine attachment site 1984 2047 5.4E-11 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Pfam PF00550 Phosphopantetheine attachment site 2996 3054 2.3E-5 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 SUPERFAMILY SSF53901 2085 2457 9.72E-76 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Gene3D G3DSA:1.10.1200.10 1967 2053 3.5E-16 T 01-11-2018 IPR036736 ACP-like superfamily D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 SUPERFAMILY SSF53901 589 1007 6.51E-76 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Gene3D G3DSA:3.30.70.3290 1030 1442 3.3E-121 T 01-11-2018 D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 SMART SM00823 Phosphopantetheine attachment site 1982 2051 5.8E-7 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 2247 2263 - T 01-11-2018 IPR018201 Beta-ketoacyl synthase, active site D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Gene3D G3DSA:3.40.50.720 1477 1950 3.0E-70 T 01-11-2018 D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1114 1411 1.7E-77 T 01-11-2018 IPR020801 Polyketide synthase, acyl transferase domain D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 2609 2897 5.2E-77 T 01-11-2018 IPR020801 Polyketide synthase, acyl transferase domain D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 SUPERFAMILY SSF51735 1484 1681 7.48E-8 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 9 255 4.8E-65 T 01-11-2018 IPR014030 Beta-ketoacyl synthase, N-terminal D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2086 2334 2.7E-64 T 01-11-2018 IPR014030 Beta-ketoacyl synthase, N-terminal D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 591 839 4.7E-61 T 01-11-2018 IPR014030 Beta-ketoacyl synthase, N-terminal D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Gene3D G3DSA:3.40.47.10 587 1015 1.0E-133 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Gene3D G3DSA:3.40.47.10 2083 2510 4.2E-147 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 SUPERFAMILY SSF47336 485 605 3.14E-10 T 01-11-2018 IPR036736 ACP-like superfamily D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 168 184 - T 01-11-2018 IPR018201 Beta-ketoacyl synthase, active site D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 SUPERFAMILY SSF55048 2733 2791 5.36E-5 T 01-11-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 752 768 - T 01-11-2018 IPR018201 Beta-ketoacyl synthase, active site D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 SUPERFAMILY SSF53901 9 366 1.53E-75 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 SUPERFAMILY SSF47336 2993 3058 2.09E-8 T 01-11-2018 IPR036736 ACP-like superfamily D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Gene3D G3DSA:3.40.366.10 1110 1412 3.3E-121 T 01-11-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 973 1077 9.6E-12 T 01-11-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 383 439 5.6E-8 T 01-11-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2461 2567 1.3E-13 T 01-11-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 Gene3D G3DSA:1.10.1200.10 486 555 6.4E-9 T 01-11-2018 IPR036736 ACP-like superfamily D3790_09395 68386aef4ffa224277a9d7596b1b0c70 3421 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1705 1903 8.7E-29 T 01-11-2018 D3790_03605 52043b066bd575be3ba1fef6c76e842e 193 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 188 33.124 T 01-11-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 D3790_03605 52043b066bd575be3ba1fef6c76e842e 193 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 188 2.6E-68 T 01-11-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 D3790_03605 52043b066bd575be3ba1fef6c76e842e 193 Pfam PF02669 K+-transporting ATPase, c chain 5 186 1.4E-68 T 01-11-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 D3790_03605 52043b066bd575be3ba1fef6c76e842e 193 PIRSF PIRSF001296 1 191 8.4E-73 T 01-11-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 D3790_16570 5e8ff07b13a59fc0126794f8efa60f98 704 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 700 2.1E-281 T 01-11-2018 IPR004811 RelA/SpoT family GO:0015969 D3790_16570 5e8ff07b13a59fc0126794f8efa60f98 704 SUPERFAMILY SSF81301 180 392 5.56E-63 T 01-11-2018 D3790_16570 5e8ff07b13a59fc0126794f8efa60f98 704 SUPERFAMILY SSF81271 375 447 1.85E-20 T 01-11-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 D3790_16570 5e8ff07b13a59fc0126794f8efa60f98 704 SMART SM00471 41 153 5.9E-12 T 01-11-2018 IPR003607 HD/PDEase domain D3790_16570 5e8ff07b13a59fc0126794f8efa60f98 704 Gene3D G3DSA:3.30.70.260 625 704 9.2E-13 T 01-11-2018 D3790_16570 5e8ff07b13a59fc0126794f8efa60f98 704 Gene3D G3DSA:3.30.460.10 193 325 4.9E-48 T 01-11-2018 D3790_16570 5e8ff07b13a59fc0126794f8efa60f98 704 SMART SM00954 235 345 4.2E-63 T 01-11-2018 IPR007685 RelA/SpoT GO:0015969 D3790_16570 5e8ff07b13a59fc0126794f8efa60f98 704 Pfam PF02824 TGS domain 388 447 1.5E-19 T 01-11-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 D3790_16570 5e8ff07b13a59fc0126794f8efa60f98 704 Gene3D G3DSA:1.10.3210.10 3 190 1.0E-81 T 01-11-2018 D3790_16570 5e8ff07b13a59fc0126794f8efa60f98 704 Pfam PF13291 ACT domain 624 701 6.3E-14 T 01-11-2018 IPR002912 ACT domain D3790_16570 5e8ff07b13a59fc0126794f8efa60f98 704 SUPERFAMILY SSF55021 631 701 1.67E-5 T 01-11-2018 D3790_16570 5e8ff07b13a59fc0126794f8efa60f98 704 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 7.0E-36 T 01-11-2018 IPR007685 RelA/SpoT GO:0015969 D3790_16570 5e8ff07b13a59fc0126794f8efa60f98 704 Gene3D G3DSA:3.10.20.30 381 455 1.0E-28 T 01-11-2018 IPR012675 Beta-grasp domain superfamily D3790_16570 5e8ff07b13a59fc0126794f8efa60f98 704 Pfam PF13328 HD domain 26 175 8.3E-54 T 01-11-2018 IPR003607 HD/PDEase domain D3790_16570 5e8ff07b13a59fc0126794f8efa60f98 704 SUPERFAMILY SSF109604 3 190 1.1E-75 T 01-11-2018 D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 Gene3D G3DSA:3.40.50.150 1040 1223 1.8E-30 T 01-11-2018 D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 SUPERFAMILY SSF52777 81 258 5.11E-47 T 01-11-2018 D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 Gene3D G3DSA:3.30.300.30 939 1026 1.4E-11 T 01-11-2018 D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 SUPERFAMILY SSF52777 266 506 9.45E-62 T 01-11-2018 D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 Gene3D G3DSA:3.40.50.12780 543 938 1.7E-131 T 01-11-2018 D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 Gene3D G3DSA:3.30.300.30 1362 1456 5.8E-12 T 01-11-2018 D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 Gene3D G3DSA:1.10.1200.10 1457 1540 7.1E-23 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 Gene3D G3DSA:3.30.559.30 262 503 1.2E-141 T 01-11-2018 D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 Pfam PF00668 Condensation domain 77 505 5.4E-103 T 01-11-2018 IPR001242 Condensation domain D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 Pfam PF00668 Condensation domain 1552 1989 4.0E-63 T 01-11-2018 IPR001242 Condensation domain D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 Gene3D G3DSA:3.30.559.10 1555 1934 6.7E-73 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 571 969 2.6E-126 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 ProSitePatterns PS00455 Putative AMP-binding domain signature. 697 708 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 SUPERFAMILY SSF52777 1552 1755 3.06E-35 T 01-11-2018 D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 Gene3D G3DSA:1.10.10.1830 4 56 2.5E-5 T 01-11-2018 D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 Gene3D G3DSA:3.30.559.30 1739 1988 6.7E-73 T 01-11-2018 D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1491 1506 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 Pfam PF00550 Phosphopantetheine attachment site 1468 1530 6.4E-9 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 Pfam PF00501 AMP-binding enzyme 550 945 1.2E-103 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 Pfam PF08242 Methyltransferase domain 1070 1168 1.3E-11 T 01-11-2018 IPR013217 Methyltransferase type 12 D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 SUPERFAMILY SSF47336 1459 1533 1.83E-17 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 SUPERFAMILY SSF53335 1036 1185 3.35E-24 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 SUPERFAMILY SSF52777 1741 1989 4.45E-29 T 01-11-2018 D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 SUPERFAMILY SSF56801 512 1480 4.58E-152 T 01-11-2018 D3790_07090 6c16e149c2fcf88b6c04241eab31ed1d 1998 Gene3D G3DSA:3.30.559.10 80 450 1.2E-141 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_04850 cab5266bf415c11a7d8a0447ad8b7240 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 01-11-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D3790_04850 cab5266bf415c11a7d8a0447ad8b7240 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 2.8E-179 T 01-11-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D3790_04850 cab5266bf415c11a7d8a0447ad8b7240 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 185.121 T 01-11-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D3790_04850 cab5266bf415c11a7d8a0447ad8b7240 400 Pfam PF00871 Acetokinase family 6 393 5.7E-174 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D3790_04850 cab5266bf415c11a7d8a0447ad8b7240 400 Gene3D G3DSA:3.30.420.40 199 400 3.9E-85 T 01-11-2018 D3790_04850 cab5266bf415c11a7d8a0447ad8b7240 400 PRINTS PR00471 Acetate kinase family signature 380 392 3.3E-47 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D3790_04850 cab5266bf415c11a7d8a0447ad8b7240 400 PRINTS PR00471 Acetate kinase family signature 6 17 3.3E-47 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D3790_04850 cab5266bf415c11a7d8a0447ad8b7240 400 PRINTS PR00471 Acetate kinase family signature 206 227 3.3E-47 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D3790_04850 cab5266bf415c11a7d8a0447ad8b7240 400 PRINTS PR00471 Acetate kinase family signature 325 341 3.3E-47 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D3790_04850 cab5266bf415c11a7d8a0447ad8b7240 400 PRINTS PR00471 Acetate kinase family signature 302 315 3.3E-47 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D3790_04850 cab5266bf415c11a7d8a0447ad8b7240 400 PRINTS PR00471 Acetate kinase family signature 176 189 3.3E-47 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D3790_04850 cab5266bf415c11a7d8a0447ad8b7240 400 SUPERFAMILY SSF53067 4 199 5.11E-63 T 01-11-2018 D3790_04850 cab5266bf415c11a7d8a0447ad8b7240 400 SUPERFAMILY SSF53067 159 398 1.08E-83 T 01-11-2018 D3790_04850 cab5266bf415c11a7d8a0447ad8b7240 400 PIRSF PIRSF000722 2 400 5.7E-143 T 01-11-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D3790_04850 cab5266bf415c11a7d8a0447ad8b7240 400 Gene3D G3DSA:3.30.420.40 3 198 3.1E-77 T 01-11-2018 D3790_04850 cab5266bf415c11a7d8a0447ad8b7240 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 01-11-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D3790_03655 83803b1162550f061beee58be41984d1 129 Gene3D G3DSA:1.20.1300.10 2 129 1.1E-42 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_03655 83803b1162550f061beee58be41984d1 129 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 9 33 - T 01-11-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_03655 83803b1162550f061beee58be41984d1 129 PIRSF PIRSF000178 2 129 1.7E-28 T 01-11-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_03655 83803b1162550f061beee58be41984d1 129 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 84 97 - T 01-11-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_03655 83803b1162550f061beee58be41984d1 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 126 2.7E-37 T 01-11-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_03655 83803b1162550f061beee58be41984d1 129 SUPERFAMILY SSF81343 4 129 2.07E-32 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_03655 83803b1162550f061beee58be41984d1 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 123 1.2E-27 T 01-11-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_02165 60657e9c032774e2500de2cee9f0fe2e 114 Pfam PF04355 SmpA / OmlA family 35 104 1.7E-28 T 01-11-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 D3790_02165 60657e9c032774e2500de2cee9f0fe2e 114 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 32.889 T 01-11-2018 IPR026592 Outer membrane protein assembly factor BamE D3790_02165 60657e9c032774e2500de2cee9f0fe2e 114 Gene3D G3DSA:3.30.1450.10 34 114 5.6E-31 T 01-11-2018 IPR037873 BamE-like D3790_17195 2bd44cdc4a165f7a5a232c3c9dc4d201 115 Pfam PF05717 IS66 Orf2 like protein 9 106 4.0E-38 T 01-11-2018 IPR008878 Transposase IS66, Orf2 D3790_13025 2bd44cdc4a165f7a5a232c3c9dc4d201 115 Pfam PF05717 IS66 Orf2 like protein 9 106 4.0E-38 T 01-11-2018 IPR008878 Transposase IS66, Orf2 D3790_07980 2bd44cdc4a165f7a5a232c3c9dc4d201 115 Pfam PF05717 IS66 Orf2 like protein 9 106 4.0E-38 T 01-11-2018 IPR008878 Transposase IS66, Orf2 D3790_11025 0a53b52b05ce6b3b3189a7f7445e0d2d 315 Pfam PF03466 LysR substrate binding domain 116 308 3.0E-20 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_11025 0a53b52b05ce6b3b3189a7f7445e0d2d 315 Gene3D G3DSA:3.40.190.10 105 307 2.9E-35 T 01-11-2018 D3790_11025 0a53b52b05ce6b3b3189a7f7445e0d2d 315 Gene3D G3DSA:3.40.190.10 186 283 2.9E-35 T 01-11-2018 D3790_11025 0a53b52b05ce6b3b3189a7f7445e0d2d 315 SUPERFAMILY SSF53850 105 309 2.71E-40 T 01-11-2018 D3790_11025 0a53b52b05ce6b3b3189a7f7445e0d2d 315 Gene3D G3DSA:1.10.10.10 15 102 2.4E-31 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_11025 0a53b52b05ce6b3b3189a7f7445e0d2d 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_11025 0a53b52b05ce6b3b3189a7f7445e0d2d 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 60 2.1E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_11025 0a53b52b05ce6b3b3189a7f7445e0d2d 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 60 71 2.1E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_11025 0a53b52b05ce6b3b3189a7f7445e0d2d 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 82 2.4E-19 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_11025 0a53b52b05ce6b3b3189a7f7445e0d2d 315 SUPERFAMILY SSF46785 19 98 2.22E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_03715 75dae7228835b5974c01051327e2c15a 133 Gene3D G3DSA:3.10.129.10 1 133 3.8E-40 T 01-11-2018 D3790_03715 75dae7228835b5974c01051327e2c15a 133 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 8.1E-47 T 01-11-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 D3790_03715 75dae7228835b5974c01051327e2c15a 133 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 7.2E-41 T 01-11-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 D3790_03715 75dae7228835b5974c01051327e2c15a 133 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 11 28 - T 01-11-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 D3790_03715 75dae7228835b5974c01051327e2c15a 133 SUPERFAMILY SSF54637 1 132 1.26E-40 T 01-11-2018 IPR029069 HotDog domain superfamily D3790_03715 75dae7228835b5974c01051327e2c15a 133 Pfam PF03061 Thioesterase superfamily 21 103 1.0E-16 T 01-11-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 D3790_03715 75dae7228835b5974c01051327e2c15a 133 PIRSF PIRSF003230 1 133 1.0E-43 T 01-11-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 D3790_05405 1d0d1e577dcac540c108a152dfb07130 487 SMART SM00116 245 293 1.2E-4 T 01-11-2018 IPR000644 CBS domain D3790_05405 1d0d1e577dcac540c108a152dfb07130 487 Gene3D G3DSA:1.25.60.10 50 169 3.0E-15 T 01-11-2018 IPR038076 MgtE, N-terminal domain superfamily D3790_05405 1d0d1e577dcac540c108a152dfb07130 487 SUPERFAMILY SSF54631 174 313 2.1E-25 T 01-11-2018 D3790_05405 1d0d1e577dcac540c108a152dfb07130 487 SUPERFAMILY SSF158791 60 170 6.93E-23 T 01-11-2018 D3790_05405 1d0d1e577dcac540c108a152dfb07130 487 Gene3D G3DSA:3.10.580.10 170 297 6.3E-37 T 01-11-2018 D3790_05405 1d0d1e577dcac540c108a152dfb07130 487 Pfam PF00571 CBS domain 238 293 4.5E-7 T 01-11-2018 IPR000644 CBS domain D3790_05405 1d0d1e577dcac540c108a152dfb07130 487 Pfam PF01769 Divalent cation transporter 358 479 7.6E-25 T 01-11-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 D3790_05405 1d0d1e577dcac540c108a152dfb07130 487 SUPERFAMILY SSF161093 316 486 4.71E-47 T 01-11-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 D3790_05405 1d0d1e577dcac540c108a152dfb07130 487 TIGRFAM TIGR00400 mgtE: magnesium transporter 60 486 5.2E-79 T 01-11-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 D3790_05405 1d0d1e577dcac540c108a152dfb07130 487 Gene3D G3DSA:1.10.357.20 313 487 2.0E-46 T 01-11-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain D3790_05405 1d0d1e577dcac540c108a152dfb07130 487 SMART SM00924 71 174 5.4E-30 T 01-11-2018 IPR006668 Magnesium transporter, MgtE intracellular domain D3790_05405 1d0d1e577dcac540c108a152dfb07130 487 Pfam PF03448 MgtE intracellular N domain 71 172 2.9E-22 T 01-11-2018 IPR006668 Magnesium transporter, MgtE intracellular domain D3790_05355 9b61fa517b8fdb1224fc1f220067df08 69 PIRSF PIRSF002599 1 69 1.9E-25 T 01-11-2018 IPR012156 Cold shock, CspA GO:0003676 D3790_05355 9b61fa517b8fdb1224fc1f220067df08 69 PRINTS PR00050 Cold shock protein signature 6 21 6.1E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_05355 9b61fa517b8fdb1224fc1f220067df08 69 PRINTS PR00050 Cold shock protein signature 27 36 6.1E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_05355 9b61fa517b8fdb1224fc1f220067df08 69 PRINTS PR00050 Cold shock protein signature 42 60 6.1E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_05355 9b61fa517b8fdb1224fc1f220067df08 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 6.4E-33 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_05355 9b61fa517b8fdb1224fc1f220067df08 69 SUPERFAMILY SSF50249 3 67 3.17E-26 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_05355 9b61fa517b8fdb1224fc1f220067df08 69 SMART SM00357 5 69 2.0E-31 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 D3790_05355 9b61fa517b8fdb1224fc1f220067df08 69 Gene3D G3DSA:2.40.50.140 1 69 2.1E-32 T 01-11-2018 D3790_05355 9b61fa517b8fdb1224fc1f220067df08 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 01-11-2018 IPR019844 Cold-shock conserved site D3790_13255 9b9f2a4e722a774beffec73ee088a46a 154 SUPERFAMILY SSF57825 101 151 3.14E-15 T 01-11-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily D3790_13255 9b9f2a4e722a774beffec73ee088a46a 154 Gene3D G3DSA:3.30.70.140 1 100 7.7E-37 T 01-11-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily D3790_13255 9b9f2a4e722a774beffec73ee088a46a 154 Gene3D G3DSA:2.30.30.20 101 153 1.6E-23 T 01-11-2018 D3790_13255 9b9f2a4e722a774beffec73ee088a46a 154 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.818 T 01-11-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 D3790_13255 9b9f2a4e722a774beffec73ee088a46a 154 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 96 7.0E-30 T 01-11-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal D3790_13255 9b9f2a4e722a774beffec73ee088a46a 154 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 150 4.4E-19 T 01-11-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal D3790_13255 9b9f2a4e722a774beffec73ee088a46a 154 SUPERFAMILY SSF54893 2 100 2.35E-35 T 01-11-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily D3790_13255 9b9f2a4e722a774beffec73ee088a46a 154 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 2.0E-39 T 01-11-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal D3790_13255 9b9f2a4e722a774beffec73ee088a46a 154 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 6.0E-64 T 01-11-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 D3790_15465 8a8ad97c864b332ed29ef6b861ad7d09 287 Gene3D G3DSA:1.10.287.80 6 283 1.0E-112 T 01-11-2018 D3790_15465 8a8ad97c864b332ed29ef6b861ad7d09 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.9E-37 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15465 8a8ad97c864b332ed29ef6b861ad7d09 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.9E-37 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15465 8a8ad97c864b332ed29ef6b861ad7d09 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 1.9E-37 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15465 8a8ad97c864b332ed29ef6b861ad7d09 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 1.9E-37 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15465 8a8ad97c864b332ed29ef6b861ad7d09 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 3.5E-111 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15465 8a8ad97c864b332ed29ef6b861ad7d09 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.359 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15465 8a8ad97c864b332ed29ef6b861ad7d09 287 Pfam PF00231 ATP synthase 5 286 1.6E-96 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15465 8a8ad97c864b332ed29ef6b861ad7d09 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 01-11-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15465 8a8ad97c864b332ed29ef6b861ad7d09 287 Gene3D G3DSA:3.40.1380.10 61 206 1.0E-112 T 01-11-2018 D3790_15465 8a8ad97c864b332ed29ef6b861ad7d09 287 SUPERFAMILY SSF52943 2 287 2.85E-96 T 01-11-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_11965 1f929ec40e3d8b2fbf82f2afd3643bbc 229 Pfam PF00072 Response regulator receiver domain 5 117 5.2E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_11965 1f929ec40e3d8b2fbf82f2afd3643bbc 229 SUPERFAMILY SSF52172 3 129 1.57E-43 T 01-11-2018 IPR011006 CheY-like superfamily D3790_11965 1f929ec40e3d8b2fbf82f2afd3643bbc 229 SMART SM00862 148 225 2.8E-26 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D3790_11965 1f929ec40e3d8b2fbf82f2afd3643bbc 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 4.7E-112 T 01-11-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 D3790_11965 1f929ec40e3d8b2fbf82f2afd3643bbc 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 225 2.6E-28 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D3790_11965 1f929ec40e3d8b2fbf82f2afd3643bbc 229 Gene3D G3DSA:3.40.50.2300 2 128 3.9E-39 T 01-11-2018 D3790_11965 1f929ec40e3d8b2fbf82f2afd3643bbc 229 SUPERFAMILY SSF46894 128 226 9.92E-32 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D3790_11965 1f929ec40e3d8b2fbf82f2afd3643bbc 229 SMART SM00448 3 116 5.9E-46 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_11965 1f929ec40e3d8b2fbf82f2afd3643bbc 229 Gene3D G3DSA:1.10.10.10 129 229 1.8E-39 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_08630 225192968efcda61569273edb5b8f9fb 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 4.8E-161 T 01-11-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 D3790_08630 225192968efcda61569273edb5b8f9fb 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.2E-196 T 01-11-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 D3790_08630 225192968efcda61569273edb5b8f9fb 488 SMART SM00116 96 144 1.4E-11 T 01-11-2018 IPR000644 CBS domain D3790_08630 225192968efcda61569273edb5b8f9fb 488 SMART SM00116 158 206 9.2E-8 T 01-11-2018 IPR000644 CBS domain D3790_08630 225192968efcda61569273edb5b8f9fb 488 SUPERFAMILY SSF54631 94 203 8.59E-26 T 01-11-2018 D3790_08630 225192968efcda61569273edb5b8f9fb 488 PIRSF PIRSF000130 1 487 2.6E-197 T 01-11-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 D3790_08630 225192968efcda61569273edb5b8f9fb 488 SUPERFAMILY SSF51412 2 477 1.44E-124 T 01-11-2018 D3790_08630 225192968efcda61569273edb5b8f9fb 488 Gene3D G3DSA:3.20.20.70 1 486 1.5E-207 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_08630 225192968efcda61569273edb5b8f9fb 488 Pfam PF00571 CBS domain 95 140 9.9E-9 T 01-11-2018 IPR000644 CBS domain D3790_08630 225192968efcda61569273edb5b8f9fb 488 Pfam PF00571 CBS domain 149 202 1.6E-4 T 01-11-2018 IPR000644 CBS domain D3790_08630 225192968efcda61569273edb5b8f9fb 488 SMART SM01240 7 473 0.0 T 01-11-2018 D3790_08630 225192968efcda61569273edb5b8f9fb 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 01-11-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 D3790_08630 225192968efcda61569273edb5b8f9fb 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.171 T 01-11-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 D3790_10425 23e6c293233a19500b34e158bff06985 226 Pfam PF02677 Uncharacterized BCR, COG1636 19 193 1.5E-64 T 01-11-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 D3790_10425 23e6c293233a19500b34e158bff06985 226 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 19 195 33.512 T 01-11-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 D3790_01175 0d6b73305eea46146d91055961e0f109 323 Pfam PF04960 Glutaminase 39 323 1.4E-113 T 01-11-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 D3790_01175 0d6b73305eea46146d91055961e0f109 323 Gene3D G3DSA:3.40.710.10 17 323 3.6E-111 T 01-11-2018 D3790_01175 0d6b73305eea46146d91055961e0f109 323 TIGRFAM TIGR03814 Gln_ase: glutaminase A 25 323 1.3E-131 T 01-11-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 D3790_01175 0d6b73305eea46146d91055961e0f109 323 SUPERFAMILY SSF56601 21 323 1.92E-114 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like D3790_01175 0d6b73305eea46146d91055961e0f109 323 Hamap MF_00313 Glutaminase [glsA]. 21 323 46.584 T 01-11-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 D3790_06315 7728a2ce2d3ec2dc43aa00fee9ba9911 801 Gene3D G3DSA:1.10.439.10 34 200 1.5E-52 T 01-11-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 D3790_06315 7728a2ce2d3ec2dc43aa00fee9ba9911 801 Gene3D G3DSA:3.60.20.10 219 789 2.2E-158 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D3790_06315 7728a2ce2d3ec2dc43aa00fee9ba9911 801 SUPERFAMILY SSF56235 37 799 3.34E-141 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D3790_06315 7728a2ce2d3ec2dc43aa00fee9ba9911 801 Pfam PF01804 Penicillin amidase 38 790 2.3E-118 T 01-11-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 D3790_06315 7728a2ce2d3ec2dc43aa00fee9ba9911 801 Gene3D G3DSA:1.10.1400.10 505 724 2.2E-158 T 01-11-2018 D3790_06315 7728a2ce2d3ec2dc43aa00fee9ba9911 801 Gene3D G3DSA:2.30.120.10 295 367 2.2E-158 T 01-11-2018 D3790_11700 c63444d551d04f2862291b369794ecef 297 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 10 294 38.643 T 01-11-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 D3790_11700 c63444d551d04f2862291b369794ecef 297 Gene3D G3DSA:3.40.50.620 10 288 1.5E-107 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_11700 c63444d551d04f2862291b369794ecef 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 13 25 2.4E-14 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D3790_11700 c63444d551d04f2862291b369794ecef 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 42 55 2.4E-14 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D3790_11700 c63444d551d04f2862291b369794ecef 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 174 184 2.4E-14 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D3790_11700 c63444d551d04f2862291b369794ecef 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 27 38 2.4E-14 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D3790_11700 c63444d551d04f2862291b369794ecef 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 190 198 2.4E-14 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D3790_11700 c63444d551d04f2862291b369794ecef 297 SUPERFAMILY SSF52374 10 289 1.42E-80 T 01-11-2018 D3790_11700 c63444d551d04f2862291b369794ecef 297 Gene3D G3DSA:3.40.50.620 85 222 1.5E-107 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_11700 c63444d551d04f2862291b369794ecef 297 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 13 114 8.4E-26 T 01-11-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 D3790_11700 c63444d551d04f2862291b369794ecef 297 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 131 255 9.0E-18 T 01-11-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 D3790_11700 c63444d551d04f2862291b369794ecef 297 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 10 274 8.6E-108 T 01-11-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 D3790_19225 7145f4786b8ecc8f46a4496cb73e0631 321 Gene3D G3DSA:3.40.50.1820 7 305 5.4E-57 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_19225 7145f4786b8ecc8f46a4496cb73e0631 321 SUPERFAMILY SSF53474 40 294 6.09E-46 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_19225 7145f4786b8ecc8f46a4496cb73e0631 321 Pfam PF07859 alpha/beta hydrolase fold 87 290 8.7E-43 T 01-11-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 Pfam PF00575 S1 RNA binding domain 133 195 7.4E-5 T 01-11-2018 IPR003029 S1 domain GO:0003676 D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 Pfam PF14520 Helix-hairpin-helix domain 439 493 3.2E-10 T 01-11-2018 D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 Gene3D G3DSA:1.10.150.20 438 497 3.8E-26 T 01-11-2018 D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 SUPERFAMILY SSF54814 201 278 2.42E-29 T 01-11-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 SMART SM00316 133 200 1.1E-7 T 01-11-2018 IPR022967 RNA-binding domain, S1 D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 SUPERFAMILY SSF47794 363 422 9.1E-16 T 01-11-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 Gene3D G3DSA:3.30.300.20 199 277 2.9E-31 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 417 27.561 T 01-11-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 Gene3D G3DSA:2.40.50.140 135 198 9.5E-18 T 01-11-2018 D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 Pfam PF08529 NusA N-terminal domain 4 123 1.1E-36 T 01-11-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 Gene3D G3DSA:3.30.300.20 278 353 6.0E-20 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 SUPERFAMILY SSF47794 436 499 1.05E-17 T 01-11-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 348 6.3E-124 T 01-11-2018 IPR010213 Transcription termination factor NusA GO:0003723 D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 Pfam PF13184 NusA-like KH domain 230 297 8.3E-28 T 01-11-2018 IPR025249 KH domain, NusA-like GO:0003723 D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 Gene3D G3DSA:1.10.150.20 359 428 9.3E-28 T 01-11-2018 D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 SUPERFAMILY SSF54814 279 334 5.23E-12 T 01-11-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 SUPERFAMILY SSF50249 132 199 8.17E-17 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 SUPERFAMILY SSF69705 1 126 4.71E-41 T 01-11-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 Gene3D G3DSA:3.30.1480.10 1 129 4.8E-46 T 01-11-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 447 496 4.1E-18 T 01-11-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication D3790_13355 86dd4f6b0fe8edc8ab29d27d481fd64d 502 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 372 421 1.5E-20 T 01-11-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication D3790_18490 1e86c313e21ffa24f7a6eb6d81304446 443 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 208 4.4E-52 T 01-11-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 D3790_18490 1e86c313e21ffa24f7a6eb6d81304446 443 Pfam PF11734 TilS substrate C-terminal domain 369 437 3.0E-23 T 01-11-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 D3790_18490 1e86c313e21ffa24f7a6eb6d81304446 443 SUPERFAMILY SSF56037 329 442 4.18E-29 T 01-11-2018 D3790_18490 1e86c313e21ffa24f7a6eb6d81304446 443 SUPERFAMILY SSF52402 13 238 4.19E-60 T 01-11-2018 D3790_18490 1e86c313e21ffa24f7a6eb6d81304446 443 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 369 414 4.3E-12 T 01-11-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 D3790_18490 1e86c313e21ffa24f7a6eb6d81304446 443 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 9 315 24.263 T 01-11-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 D3790_18490 1e86c313e21ffa24f7a6eb6d81304446 443 SUPERFAMILY SSF82829 239 324 1.07E-22 T 01-11-2018 D3790_18490 1e86c313e21ffa24f7a6eb6d81304446 443 Pfam PF01171 PP-loop family 21 203 5.1E-57 T 01-11-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 D3790_18490 1e86c313e21ffa24f7a6eb6d81304446 443 SMART SM00977 369 441 6.8E-21 T 01-11-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 D3790_18490 1e86c313e21ffa24f7a6eb6d81304446 443 Gene3D G3DSA:3.40.50.620 10 238 1.8E-69 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_18490 1e86c313e21ffa24f7a6eb6d81304446 443 Gene3D G3DSA:1.20.59.20 239 323 3.7E-28 T 01-11-2018 D3790_18490 1e86c313e21ffa24f7a6eb6d81304446 443 Pfam PF09179 TilS substrate binding domain 256 320 5.2E-18 T 01-11-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 D3790_14260 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 01-11-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14260 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 01-11-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14260 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 01-11-2018 IPR036838 Ribosomal protein S10 domain superfamily D3790_14260 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 01-11-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14260 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 01-11-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14260 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 01-11-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14260 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 1 103 3.9E-38 T 01-11-2018 IPR036838 Ribosomal protein S10 domain superfamily D3790_14260 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 01-11-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14260 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 01-11-2018 IPR027486 Ribosomal protein S10 domain D3790_14260 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.1E-35 T 01-11-2018 IPR027486 Ribosomal protein S10 domain D3790_13380 f11224098e0e3eec292adb8f1bf0ad4c 445 SUPERFAMILY SSF55957 357 444 2.75E-22 T 01-11-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_13380 f11224098e0e3eec292adb8f1bf0ad4c 445 Gene3D G3DSA:3.40.120.10 3 154 1.0E-48 T 01-11-2018 D3790_13380 f11224098e0e3eec292adb8f1bf0ad4c 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 444 48.126 T 01-11-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_13380 f11224098e0e3eec292adb8f1bf0ad4c 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 01-11-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_13380 f11224098e0e3eec292adb8f1bf0ad4c 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 364 8.4E-32 T 01-11-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_13380 f11224098e0e3eec292adb8f1bf0ad4c 445 Gene3D G3DSA:3.40.120.10 174 362 4.8E-64 T 01-11-2018 D3790_13380 f11224098e0e3eec292adb8f1bf0ad4c 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 442 2.5E-198 T 01-11-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_13380 f11224098e0e3eec292adb8f1bf0ad4c 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 3.5E-19 T 01-11-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_13380 f11224098e0e3eec292adb8f1bf0ad4c 445 SUPERFAMILY SSF53738 258 365 1.02E-30 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_13380 f11224098e0e3eec292adb8f1bf0ad4c 445 Gene3D G3DSA:3.30.310.50 370 445 1.8E-26 T 01-11-2018 D3790_13380 f11224098e0e3eec292adb8f1bf0ad4c 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 6.6E-46 T 01-11-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_13380 f11224098e0e3eec292adb8f1bf0ad4c 445 SUPERFAMILY SSF53738 2 181 2.79E-49 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_13380 f11224098e0e3eec292adb8f1bf0ad4c 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 1.1E-14 T 01-11-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_13380 f11224098e0e3eec292adb8f1bf0ad4c 445 SUPERFAMILY SSF53738 156 255 4.71E-30 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_13380 f11224098e0e3eec292adb8f1bf0ad4c 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 4.0E-13 T 01-11-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_13380 f11224098e0e3eec292adb8f1bf0ad4c 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 4.0E-13 T 01-11-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_13380 f11224098e0e3eec292adb8f1bf0ad4c 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 4.0E-13 T 01-11-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_13380 f11224098e0e3eec292adb8f1bf0ad4c 445 Gene3D G3DSA:3.40.120.10 257 339 4.8E-64 T 01-11-2018 D3790_02650 a81d2fc739fb51d5d8e46bfc0e8fc9d6 704 Gene3D G3DSA:2.30.110.50 99 408 1.1E-93 T 01-11-2018 D3790_02650 a81d2fc739fb51d5d8e46bfc0e8fc9d6 704 SUPERFAMILY SSF69279 270 443 3.4E-40 T 01-11-2018 D3790_02650 a81d2fc739fb51d5d8e46bfc0e8fc9d6 704 Gene3D G3DSA:2.40.50.230 435 534 4.2E-42 T 01-11-2018 IPR037026 Vgr protein, OB-fold domain superfamily D3790_02650 a81d2fc739fb51d5d8e46bfc0e8fc9d6 704 SUPERFAMILY SSF69279 90 265 1.19E-57 T 01-11-2018 D3790_02650 a81d2fc739fb51d5d8e46bfc0e8fc9d6 704 SUPERFAMILY SSF69255 442 529 7.06E-34 T 01-11-2018 D3790_02650 a81d2fc739fb51d5d8e46bfc0e8fc9d6 704 Pfam PF05954 Phage late control gene D protein (GPD) 109 407 1.2E-85 T 01-11-2018 D3790_02650 a81d2fc739fb51d5d8e46bfc0e8fc9d6 704 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 102 581 4.8E-167 T 01-11-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein D3790_02650 a81d2fc739fb51d5d8e46bfc0e8fc9d6 704 SUPERFAMILY SSF69349 520 704 5.96E-39 T 01-11-2018 D3790_02650 a81d2fc739fb51d5d8e46bfc0e8fc9d6 704 Gene3D G3DSA:3.55.50.10 178 269 1.1E-93 T 01-11-2018 D3790_02650 a81d2fc739fb51d5d8e46bfc0e8fc9d6 704 Gene3D G3DSA:3.30.1920.30 301 364 1.1E-93 T 01-11-2018 D3790_02650 a81d2fc739fb51d5d8e46bfc0e8fc9d6 704 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 90 598 2.5E-194 T 01-11-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 SUPERFAMILY SSF56801 476 1005 1.83E-87 T 01-11-2018 D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2193 2204 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 Gene3D G3DSA:3.30.300.30 893 1007 4.0E-12 T 01-11-2018 D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 Gene3D G3DSA:3.30.559.30 1757 2009 1.5E-57 T 01-11-2018 D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 Pfam PF00550 Phosphopantetheine attachment site 1046 1093 1.5E-6 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 Pfam PF00550 Phosphopantetheine attachment site 2560 2623 6.7E-14 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 Gene3D G3DSA:1.10.1200.10 2553 2628 1.1E-18 T 01-11-2018 IPR036736 ACP-like superfamily D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 SUPERFAMILY SSF52777 1584 1751 4.52E-20 T 01-11-2018 D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 ProSitePatterns PS00455 Putative AMP-binding domain signature. 636 647 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 Gene3D G3DSA:1.10.1200.10 1034 1094 4.3E-6 T 01-11-2018 IPR036736 ACP-like superfamily D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 SUPERFAMILY SSF56801 2047 2569 3.4E-99 T 01-11-2018 D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 Gene3D G3DSA:3.40.50.12780 2042 2439 1.1E-80 T 01-11-2018 D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 SUPERFAMILY SSF52777 1127 1268 7.0E-13 T 01-11-2018 D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 SUPERFAMILY SSF52777 8 183 3.22E-14 T 01-11-2018 D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 Gene3D G3DSA:3.30.559.10 1106 1277 1.7E-18 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 SUPERFAMILY SSF47336 1043 1092 3.27E-6 T 01-11-2018 IPR036736 ACP-like superfamily D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 SMART SM00823 Phosphopantetheine attachment site 2558 2627 0.0026 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 Gene3D G3DSA:3.30.559.10 8 204 8.1E-18 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 Gene3D G3DSA:3.40.50.12780 477 891 1.6E-75 T 01-11-2018 D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 SUPERFAMILY SSF52777 190 363 4.67E-5 T 01-11-2018 D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 SUPERFAMILY SSF47336 2558 2623 3.14E-15 T 01-11-2018 IPR036736 ACP-like superfamily D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 Gene3D G3DSA:3.30.300.30 2440 2546 3.6E-18 T 01-11-2018 D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 SUPERFAMILY SSF52777 1761 1971 1.33E-22 T 01-11-2018 D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 Pfam PF00668 Condensation domain 4 205 2.1E-11 T 01-11-2018 IPR001242 Condensation domain D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 Pfam PF00668 Condensation domain 1587 2012 9.8E-39 T 01-11-2018 IPR001242 Condensation domain D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 Pfam PF00668 Condensation domain 1127 1273 1.3E-7 T 01-11-2018 IPR001242 Condensation domain D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 Pfam PF00501 AMP-binding enzyme 494 899 3.9E-61 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 Pfam PF00501 AMP-binding enzyme 2054 2444 2.9E-63 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_09420 876c29aae60659e154cba0aebc37d87a 2672 Gene3D G3DSA:3.30.559.10 1583 1959 1.5E-57 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_19665 d08eee01eec9d34f5c0b4adb07a5c843 373 Pfam PF13265 Protein of unknown function (DUF4056) 43 303 2.3E-130 T 01-11-2018 IPR025130 Protein of unknown function DUF4056 D3790_10870 13df6e202a95598afebacd1a24c878b6 140 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 24 4.8E-10 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site D3790_10870 13df6e202a95598afebacd1a24c878b6 140 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 1.6E-9 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site D3790_10870 13df6e202a95598afebacd1a24c878b6 140 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site D3790_10870 13df6e202a95598afebacd1a24c878b6 140 SUPERFAMILY SSF54523 6 99 1.78E-19 T 01-11-2018 D3790_10870 13df6e202a95598afebacd1a24c878b6 140 Gene3D G3DSA:3.30.700.10 6 139 5.7E-22 T 01-11-2018 D3790_11485 e7a1c1529fddba58aa8b3633f8f8dfc8 321 TIGRFAM TIGR00109 hemH: ferrochelatase 2 317 5.6E-104 T 01-11-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 D3790_11485 e7a1c1529fddba58aa8b3633f8f8dfc8 321 Hamap MF_00323 Ferrochelatase [hemH]. 4 320 36.428 T 01-11-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 D3790_11485 e7a1c1529fddba58aa8b3633f8f8dfc8 321 Gene3D G3DSA:3.40.50.1400 163 301 1.0E-88 T 01-11-2018 D3790_11485 e7a1c1529fddba58aa8b3633f8f8dfc8 321 SUPERFAMILY SSF53800 4 319 2.13E-99 T 01-11-2018 D3790_11485 e7a1c1529fddba58aa8b3633f8f8dfc8 321 Gene3D G3DSA:3.40.50.1400 7 318 1.0E-88 T 01-11-2018 D3790_11485 e7a1c1529fddba58aa8b3633f8f8dfc8 321 Pfam PF00762 Ferrochelatase 5 317 8.5E-105 T 01-11-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 D3790_11485 e7a1c1529fddba58aa8b3633f8f8dfc8 321 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 01-11-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 D3790_12765 b9bc4f9c3dfc6b7862b2ff74b4706790 516 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 241 513 64.777 T 01-11-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 D3790_12765 b9bc4f9c3dfc6b7862b2ff74b4706790 516 Pfam PF00448 SRP54-type protein, GTPase domain 313 512 1.2E-78 T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D3790_12765 b9bc4f9c3dfc6b7862b2ff74b4706790 516 SMART SM00962 312 513 1.8E-124 T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D3790_12765 b9bc4f9c3dfc6b7862b2ff74b4706790 516 SUPERFAMILY SSF47364 213 292 4.97E-22 T 01-11-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 D3790_12765 b9bc4f9c3dfc6b7862b2ff74b4706790 516 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 486 499 - T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D3790_12765 b9bc4f9c3dfc6b7862b2ff74b4706790 516 SUPERFAMILY SSF52540 310 512 5.54E-53 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_12765 b9bc4f9c3dfc6b7862b2ff74b4706790 516 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 241 512 3.9E-115 T 01-11-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 D3790_12765 b9bc4f9c3dfc6b7862b2ff74b4706790 516 Gene3D G3DSA:3.40.50.300 309 501 3.5E-118 T 01-11-2018 D3790_12765 b9bc4f9c3dfc6b7862b2ff74b4706790 516 SMART SM00963 218 298 1.9E-24 T 01-11-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D3790_12765 b9bc4f9c3dfc6b7862b2ff74b4706790 516 Gene3D G3DSA:1.20.120.140 215 511 3.5E-118 T 01-11-2018 D3790_12765 b9bc4f9c3dfc6b7862b2ff74b4706790 516 SMART SM00382 311 491 9.6E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_12765 b9bc4f9c3dfc6b7862b2ff74b4706790 516 Pfam PF02881 SRP54-type protein, helical bundle domain 229 294 3.0E-13 T 01-11-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D3790_03485 c1416e0f0d735f3dcf16557a86c721ce 194 SUPERFAMILY SSF81901 65 176 3.66E-21 T 01-11-2018 D3790_03485 c1416e0f0d735f3dcf16557a86c721ce 194 SMART SM00671 138 173 0.0058 T 01-11-2018 IPR006597 Sel1-like repeat D3790_03485 c1416e0f0d735f3dcf16557a86c721ce 194 SMART SM00671 106 137 11.0 T 01-11-2018 IPR006597 Sel1-like repeat D3790_03485 c1416e0f0d735f3dcf16557a86c721ce 194 SMART SM00671 71 102 200.0 T 01-11-2018 IPR006597 Sel1-like repeat D3790_03485 c1416e0f0d735f3dcf16557a86c721ce 194 Gene3D G3DSA:1.25.40.10 56 183 4.2E-18 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_19370 e392af99ddbac8cdef539535c2aa132c 386 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 49.031 T 01-11-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19370 e392af99ddbac8cdef539535c2aa132c 386 Pfam PF00117 Glutamine amidotransferase class-I 197 372 1.4E-48 T 01-11-2018 IPR017926 Glutamine amidotransferase D3790_19370 e392af99ddbac8cdef539535c2aa132c 386 Gene3D G3DSA:3.40.50.880 152 379 4.3E-77 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_19370 e392af99ddbac8cdef539535c2aa132c 386 SUPERFAMILY SSF52021 3 142 4.18E-57 T 01-11-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19370 e392af99ddbac8cdef539535c2aa132c 386 SMART SM01097 3 133 1.0E-91 T 01-11-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19370 e392af99ddbac8cdef539535c2aa132c 386 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 7.7E-11 T 01-11-2018 D3790_19370 e392af99ddbac8cdef539535c2aa132c 386 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 7.7E-11 T 01-11-2018 D3790_19370 e392af99ddbac8cdef539535c2aa132c 386 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 7.7E-11 T 01-11-2018 D3790_19370 e392af99ddbac8cdef539535c2aa132c 386 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 2.5E-52 T 01-11-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19370 e392af99ddbac8cdef539535c2aa132c 386 SUPERFAMILY SSF52317 153 378 1.83E-63 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_19370 e392af99ddbac8cdef539535c2aa132c 386 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 2.1E-151 T 01-11-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19370 e392af99ddbac8cdef539535c2aa132c 386 Gene3D G3DSA:3.50.30.20 2 151 2.2E-61 T 01-11-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19370 e392af99ddbac8cdef539535c2aa132c 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 1.3E-40 T 01-11-2018 D3790_19370 e392af99ddbac8cdef539535c2aa132c 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 1.3E-40 T 01-11-2018 D3790_19370 e392af99ddbac8cdef539535c2aa132c 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 1.3E-40 T 01-11-2018 D3790_19370 e392af99ddbac8cdef539535c2aa132c 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 1.3E-40 T 01-11-2018 D3790_19370 e392af99ddbac8cdef539535c2aa132c 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 1.3E-40 T 01-11-2018 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 874 5.7E-37 T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 2.3E-78 T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 SUPERFAMILY SSF52335 938 1071 2.09E-35 T 01-11-2018 IPR036914 Methylglyoxal synthase-like domain superfamily D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.45 T 01-11-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 Pfam PF02142 MGS-like domain 957 1041 1.2E-18 T 01-11-2018 IPR011607 Methylglyoxal synthase-like domain D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 SUPERFAMILY SSF56059 128 401 7.25E-113 T 01-11-2018 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.194 T 01-11-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 SUPERFAMILY SSF48108 396 554 1.11E-52 T 01-11-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 7.4E-39 T 01-11-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 SUPERFAMILY SSF52440 2 127 8.63E-50 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 Gene3D G3DSA:3.30.470.20 119 403 1.0E-135 T 01-11-2018 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 SMART SM01096 424 547 1.6E-71 T 01-11-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 2.4E-66 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.4E-66 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.4E-66 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.4E-66 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.4E-66 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 2.4E-66 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.4E-66 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 Gene3D G3DSA:3.40.50.1380 937 1073 9.5E-36 T 01-11-2018 IPR036914 Methylglyoxal synthase-like domain superfamily D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 Gene3D G3DSA:1.10.1030.10 404 522 2.1E-37 T 01-11-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 SUPERFAMILY SSF52440 557 676 6.91E-50 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 SUPERFAMILY SSF56059 674 934 2.47E-104 T 01-11-2018 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 3 1053 0.0 T 01-11-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 Gene3D G3DSA:3.40.50.20 1 116 2.0E-50 T 01-11-2018 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 Gene3D G3DSA:3.40.50.20 524 663 2.9E-65 T 01-11-2018 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 Gene3D G3DSA:3.30.470.20 666 936 5.3E-124 T 01-11-2018 D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 SMART SM00851 956 1042 2.3E-32 T 01-11-2018 IPR011607 Methylglyoxal synthase-like domain D3790_19365 879b61f686c93a5c64c97f935d3d91d5 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D3790_10820 029cfebb0340f98923e8d97ca40a71b5 1934 Pfam PF01841 Transglutaminase-like superfamily 61 186 9.7E-5 T 01-11-2018 IPR002931 Transglutaminase-like D3790_10820 029cfebb0340f98923e8d97ca40a71b5 1934 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1230 1271 1.0E-5 T 01-11-2018 IPR006530 YD repeat D3790_10820 029cfebb0340f98923e8d97ca40a71b5 1934 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1181 1220 0.001 T 01-11-2018 IPR006530 YD repeat D3790_10820 029cfebb0340f98923e8d97ca40a71b5 1934 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1251 1283 4.7E-4 T 01-11-2018 IPR006530 YD repeat D3790_10820 029cfebb0340f98923e8d97ca40a71b5 1934 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1060 1091 1.7E-4 T 01-11-2018 IPR006530 YD repeat D3790_10820 029cfebb0340f98923e8d97ca40a71b5 1934 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1595 1634 0.0018 T 01-11-2018 IPR006530 YD repeat D3790_10820 029cfebb0340f98923e8d97ca40a71b5 1934 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 983 1024 2.5E-5 T 01-11-2018 IPR006530 YD repeat D3790_10820 029cfebb0340f98923e8d97ca40a71b5 1934 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1705 1780 1.0E-27 T 01-11-2018 IPR022385 Rhs repeat-associated core GO:0097264 D3790_10820 029cfebb0340f98923e8d97ca40a71b5 1934 SUPERFAMILY SSF54001 47 201 7.11E-8 T 01-11-2018 IPR038765 Papain-like cysteine peptidase superfamily D3790_10820 029cfebb0340f98923e8d97ca40a71b5 1934 Gene3D G3DSA:2.180.10.10 1565 1779 2.4E-34 T 01-11-2018 D3790_10820 029cfebb0340f98923e8d97ca40a71b5 1934 Gene3D G3DSA:2.180.10.10 1044 1213 1.3E-14 T 01-11-2018 D3790_10820 029cfebb0340f98923e8d97ca40a71b5 1934 PRINTS PR00394 RHS protein signature 1724 1744 5.5E-8 T 01-11-2018 IPR001826 RHS protein D3790_10820 029cfebb0340f98923e8d97ca40a71b5 1934 PRINTS PR00394 RHS protein signature 1747 1766 5.5E-8 T 01-11-2018 IPR001826 RHS protein D3790_10820 029cfebb0340f98923e8d97ca40a71b5 1934 Pfam PF05593 RHS Repeat 1160 1195 1.1E-5 T 01-11-2018 IPR031325 RHS repeat D3790_10820 029cfebb0340f98923e8d97ca40a71b5 1934 Pfam PF05593 RHS Repeat 1230 1266 6.9E-5 T 01-11-2018 IPR031325 RHS repeat D3790_10820 029cfebb0340f98923e8d97ca40a71b5 1934 Pfam PF15649 Restriction endonuclease fold toxin 7 1838 1919 2.5E-27 T 01-11-2018 IPR028903 Tox-REase-7 domain D3790_04695 faa24b99299532edc8434d7e0a168b19 339 SMART SM00052 87 333 3.9E-83 T 01-11-2018 IPR001633 EAL domain D3790_04695 faa24b99299532edc8434d7e0a168b19 339 Gene3D G3DSA:3.20.20.450 88 339 1.7E-79 T 01-11-2018 IPR035919 EAL domain superfamily D3790_04695 faa24b99299532edc8434d7e0a168b19 339 Pfam PF00563 EAL domain 94 328 3.0E-62 T 01-11-2018 IPR001633 EAL domain D3790_04695 faa24b99299532edc8434d7e0a168b19 339 SUPERFAMILY SSF141868 94 337 7.45E-73 T 01-11-2018 IPR035919 EAL domain superfamily D3790_02605 813deb053baa915df5d0640d9341d121 333 Gene3D G3DSA:1.10.443.10 120 301 5.6E-50 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_02605 813deb053baa915df5d0640d9341d121 333 Pfam PF00589 Phage integrase family 122 292 5.2E-40 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D3790_02605 813deb053baa915df5d0640d9341d121 333 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 11 98 3.1E-9 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 D3790_02605 813deb053baa915df5d0640d9341d121 333 Gene3D G3DSA:1.10.150.130 1 116 7.2E-23 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal D3790_02605 813deb053baa915df5d0640d9341d121 333 SUPERFAMILY SSF56349 4 301 2.94E-49 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_02350 61dc9769c8aab4a64607d04c14364933 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.0 T 01-11-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 D3790_02350 61dc9769c8aab4a64607d04c14364933 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 01-11-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site D3790_02350 61dc9769c8aab4a64607d04c14364933 404 SUPERFAMILY SSF53383 5 390 3.26E-112 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_02350 61dc9769c8aab4a64607d04c14364933 404 Pfam PF00266 Aminotransferase class-V 5 368 1.7E-86 T 01-11-2018 IPR000192 Aminotransferase class V domain D3790_02350 61dc9769c8aab4a64607d04c14364933 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 6.1E-228 T 01-11-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 D3790_02350 61dc9769c8aab4a64607d04c14364933 404 Gene3D G3DSA:3.40.640.10 16 262 1.5E-164 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_02350 61dc9769c8aab4a64607d04c14364933 404 PIRSF PIRSF005572 2 384 1.4E-136 T 01-11-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 D3790_02350 61dc9769c8aab4a64607d04c14364933 404 Gene3D G3DSA:3.90.1150.10 5 376 1.5E-164 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_18435 b65f14e897cb168eaf69517c5dde7d47 450 SUPERFAMILY SSF50156 102 182 1.33E-11 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 D3790_18435 b65f14e897cb168eaf69517c5dde7d47 450 SMART SM00228 210 279 2.0E-9 T 01-11-2018 IPR001478 PDZ domain GO:0005515 D3790_18435 b65f14e897cb168eaf69517c5dde7d47 450 SMART SM00228 114 185 0.017 T 01-11-2018 IPR001478 PDZ domain GO:0005515 D3790_18435 b65f14e897cb168eaf69517c5dde7d47 450 Pfam PF13180 PDZ domain 222 286 7.0E-11 T 01-11-2018 IPR001478 PDZ domain GO:0005515 D3790_18435 b65f14e897cb168eaf69517c5dde7d47 450 Pfam PF02163 Peptidase family M50 9 438 2.0E-86 T 01-11-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 D3790_18435 b65f14e897cb168eaf69517c5dde7d47 450 Gene3D G3DSA:2.30.42.10 220 307 1.2E-20 T 01-11-2018 D3790_18435 b65f14e897cb168eaf69517c5dde7d47 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 449 2.0E-151 T 01-11-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 D3790_18435 b65f14e897cb168eaf69517c5dde7d47 450 Gene3D G3DSA:2.30.42.10 125 219 6.9E-29 T 01-11-2018 D3790_18435 b65f14e897cb168eaf69517c5dde7d47 450 SUPERFAMILY SSF50156 213 288 3.42E-16 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 D3790_18385 a7500cc9aa43102c02bfd45d089b9372 274 Gene3D G3DSA:2.160.10.10 87 257 1.5E-58 T 01-11-2018 D3790_18385 a7500cc9aa43102c02bfd45d089b9372 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.595 T 01-11-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 D3790_18385 a7500cc9aa43102c02bfd45d089b9372 274 SUPERFAMILY SSF51161 1 256 1.66E-80 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily D3790_18385 a7500cc9aa43102c02bfd45d089b9372 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 1.9E-159 T 01-11-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 D3790_18385 a7500cc9aa43102c02bfd45d089b9372 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 01-11-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D3790_18385 a7500cc9aa43102c02bfd45d089b9372 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0011 T 01-11-2018 IPR001451 Hexapeptide repeat D3790_18385 a7500cc9aa43102c02bfd45d089b9372 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 3.7E-26 T 01-11-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 D3790_18385 a7500cc9aa43102c02bfd45d089b9372 274 Gene3D G3DSA:1.10.166.10 1 70 1.4E-32 T 01-11-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 D3790_18385 a7500cc9aa43102c02bfd45d089b9372 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 3.5E-13 T 01-11-2018 IPR001451 Hexapeptide repeat D3790_11260 9bd18e6b1283b42d5db6b86d08336b93 294 Pfam PF01040 UbiA prenyltransferase family 18 266 2.4E-56 T 01-11-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 D3790_11260 9bd18e6b1283b42d5db6b86d08336b93 294 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 01-11-2018 IPR030470 UbiA prenyltransferase conserved site D3790_11260 9bd18e6b1283b42d5db6b86d08336b93 294 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 18.048 T 01-11-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 D3790_11260 9bd18e6b1283b42d5db6b86d08336b93 294 Gene3D G3DSA:1.10.357.140 13 167 2.1E-17 T 01-11-2018 D3790_11260 9bd18e6b1283b42d5db6b86d08336b93 294 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 282 4.6E-90 T 01-11-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 D3790_07475 344b3432a9fd40d39a262625d2210baa 250 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 202 28.579 T 01-11-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 D3790_07475 344b3432a9fd40d39a262625d2210baa 250 Gene3D G3DSA:3.20.20.380 1 250 1.8E-88 T 01-11-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 D3790_07475 344b3432a9fd40d39a262625d2210baa 250 Pfam PF03932 CutC family 3 200 5.9E-72 T 01-11-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 D3790_07475 344b3432a9fd40d39a262625d2210baa 250 SUPERFAMILY SSF110395 2 244 9.94E-74 T 01-11-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 D3790_07830 0cd6d09fb6585bf477b66b3343fc9027 279 Pfam PF00756 Putative esterase 21 267 4.5E-67 T 01-11-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 D3790_07830 0cd6d09fb6585bf477b66b3343fc9027 279 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 3 273 6.9E-123 T 01-11-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 D3790_07830 0cd6d09fb6585bf477b66b3343fc9027 279 Gene3D G3DSA:3.40.50.1820 1 276 1.4E-93 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_07830 0cd6d09fb6585bf477b66b3343fc9027 279 SUPERFAMILY SSF53474 1 272 4.9E-85 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_18010 7174ad5ebd573d253c6aa02c2ac732e0 474 Pfam PF00294 pfkB family carbohydrate kinase 12 305 2.4E-50 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB D3790_18010 7174ad5ebd573d253c6aa02c2ac732e0 474 SUPERFAMILY SSF53613 12 310 4.21E-56 T 01-11-2018 IPR029056 Ribokinase-like D3790_18010 7174ad5ebd573d253c6aa02c2ac732e0 474 SUPERFAMILY SSF52374 341 471 2.82E-23 T 01-11-2018 D3790_18010 7174ad5ebd573d253c6aa02c2ac732e0 474 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 331 472 4.1E-65 T 01-11-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 D3790_18010 7174ad5ebd573d253c6aa02c2ac732e0 474 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.644 T 01-11-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 D3790_18010 7174ad5ebd573d253c6aa02c2ac732e0 474 Gene3D G3DSA:3.40.1190.20 3 309 5.7E-111 T 01-11-2018 IPR029056 Ribokinase-like D3790_18010 7174ad5ebd573d253c6aa02c2ac732e0 474 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 1.6E-18 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D3790_18010 7174ad5ebd573d253c6aa02c2ac732e0 474 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 6.5E-127 T 01-11-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 D3790_18010 7174ad5ebd573d253c6aa02c2ac732e0 474 Pfam PF01467 Cytidylyltransferase-like 345 469 4.3E-17 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D3790_18010 7174ad5ebd573d253c6aa02c2ac732e0 474 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 01-11-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 D3790_18010 7174ad5ebd573d253c6aa02c2ac732e0 474 Gene3D G3DSA:3.40.50.620 318 474 4.2E-40 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_11895 a02164c53d0dd5049e0e0d24f732cbd3 368 PIRSF PIRSF006769 1 367 7.1E-128 T 01-11-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 D3790_11895 a02164c53d0dd5049e0e0d24f732cbd3 368 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 101 9.7E-21 T 01-11-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain D3790_11895 a02164c53d0dd5049e0e0d24f732cbd3 368 Pfam PF01872 RibD C-terminal domain 148 361 1.3E-53 T 01-11-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 D3790_11895 a02164c53d0dd5049e0e0d24f732cbd3 368 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 362 2.8E-143 T 01-11-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 D3790_11895 a02164c53d0dd5049e0e0d24f732cbd3 368 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 01-11-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 D3790_11895 a02164c53d0dd5049e0e0d24f732cbd3 368 SUPERFAMILY SSF53927 4 146 9.39E-49 T 01-11-2018 IPR016193 Cytidine deaminase-like GO:0003824 D3790_11895 a02164c53d0dd5049e0e0d24f732cbd3 368 Gene3D G3DSA:3.40.430.10 142 367 3.5E-74 T 01-11-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 D3790_11895 a02164c53d0dd5049e0e0d24f732cbd3 368 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 366 1.9E-69 T 01-11-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 D3790_11895 a02164c53d0dd5049e0e0d24f732cbd3 368 Gene3D G3DSA:3.40.140.10 1 141 1.9E-46 T 01-11-2018 D3790_11895 a02164c53d0dd5049e0e0d24f732cbd3 368 SUPERFAMILY SSF53597 145 363 3.37E-56 T 01-11-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 D3790_18985 50715dfd7fa135e95b8e87ff230e9017 338 Gene3D G3DSA:3.20.20.70 4 337 4.7E-143 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_18985 50715dfd7fa135e95b8e87ff230e9017 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 6.6E-55 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D3790_18985 50715dfd7fa135e95b8e87ff230e9017 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 6.6E-55 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D3790_18985 50715dfd7fa135e95b8e87ff230e9017 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 6.6E-55 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D3790_18985 50715dfd7fa135e95b8e87ff230e9017 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 6.6E-55 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D3790_18985 50715dfd7fa135e95b8e87ff230e9017 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 6.6E-55 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D3790_18985 50715dfd7fa135e95b8e87ff230e9017 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 6.6E-55 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D3790_18985 50715dfd7fa135e95b8e87ff230e9017 338 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 01-11-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D3790_18985 50715dfd7fa135e95b8e87ff230e9017 338 PIRSF PIRSF001415 4 336 2.2E-149 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D3790_18985 50715dfd7fa135e95b8e87ff230e9017 338 SMART SM01004 9 333 2.9E-238 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D3790_18985 50715dfd7fa135e95b8e87ff230e9017 338 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 2.1E-136 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D3790_18985 50715dfd7fa135e95b8e87ff230e9017 338 SUPERFAMILY SSF51569 8 335 4.4E-141 T 01-11-2018 D3790_02375 d3b777ee42a03887309280dc2adb9219 111 PRINTS PR00355 Adrenodoxin signature 42 52 9.4E-10 T 01-11-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 D3790_02375 d3b777ee42a03887309280dc2adb9219 111 PRINTS PR00355 Adrenodoxin signature 83 91 9.4E-10 T 01-11-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 D3790_02375 d3b777ee42a03887309280dc2adb9219 111 PRINTS PR00355 Adrenodoxin signature 60 74 9.4E-10 T 01-11-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 D3790_02375 d3b777ee42a03887309280dc2adb9219 111 SUPERFAMILY SSF54292 4 109 3.19E-35 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D3790_02375 d3b777ee42a03887309280dc2adb9219 111 Gene3D G3DSA:3.10.20.30 1 111 3.9E-37 T 01-11-2018 IPR012675 Beta-grasp domain superfamily D3790_02375 d3b777ee42a03887309280dc2adb9219 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 92 8.1E-16 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 D3790_02375 d3b777ee42a03887309280dc2adb9219 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 1.2E-62 T 01-11-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 D3790_02375 d3b777ee42a03887309280dc2adb9219 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 01-11-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 D3790_18450 a2d90aa731d6ba02d3978339134377a6 342 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 9.3E-125 T 01-11-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 D3790_18450 a2d90aa731d6ba02d3978339134377a6 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 2.9E-8 T 01-11-2018 IPR001451 Hexapeptide repeat D3790_18450 a2d90aa731d6ba02d3978339134377a6 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 2.9E-7 T 01-11-2018 IPR001451 Hexapeptide repeat D3790_18450 a2d90aa731d6ba02d3978339134377a6 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 8.8E-8 T 01-11-2018 IPR001451 Hexapeptide repeat D3790_18450 a2d90aa731d6ba02d3978339134377a6 342 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 7.3E-21 T 01-11-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 D3790_18450 a2d90aa731d6ba02d3978339134377a6 342 Gene3D G3DSA:2.160.10.10 100 309 7.4E-68 T 01-11-2018 D3790_18450 a2d90aa731d6ba02d3978339134377a6 342 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.813 T 01-11-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 D3790_18450 a2d90aa731d6ba02d3978339134377a6 342 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 01-11-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D3790_18450 a2d90aa731d6ba02d3978339134377a6 342 Gene3D G3DSA:3.40.1390.10 1 99 6.2E-34 T 01-11-2018 D3790_18450 a2d90aa731d6ba02d3978339134377a6 342 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 01-11-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D3790_18450 a2d90aa731d6ba02d3978339134377a6 342 SUPERFAMILY SSF51161 32 316 3.1E-87 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily D3790_09235 8f4f119469cec76eb87a92ec36e3b891 1326 Gene3D G3DSA:1.10.1220.10 11 52 3.6E-22 T 01-11-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 D3790_09235 8f4f119469cec76eb87a92ec36e3b891 1326 SUPERFAMILY SSF81935 88 261 1.11E-65 T 01-11-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 D3790_09235 8f4f119469cec76eb87a92ec36e3b891 1326 Gene3D G3DSA:3.20.20.220 218 610 1.6E-160 T 01-11-2018 D3790_09235 8f4f119469cec76eb87a92ec36e3b891 1326 SUPERFAMILY SSF51730 262 617 4.32E-123 T 01-11-2018 IPR029041 FAD-linked oxidoreductase-like D3790_09235 8f4f119469cec76eb87a92ec36e3b891 1326 SUPERFAMILY SSF53720 629 1119 4.19E-124 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D3790_09235 8f4f119469cec76eb87a92ec36e3b891 1326 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 914 925 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 D3790_09235 8f4f119469cec76eb87a92ec36e3b891 1326 Gene3D G3DSA:1.20.5.550 87 138 1.0E-23 T 01-11-2018 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 D3790_09235 8f4f119469cec76eb87a92ec36e3b891 1326 Gene3D G3DSA:3.40.605.10 644 1117 1.2E-141 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D3790_09235 8f4f119469cec76eb87a92ec36e3b891 1326 Gene3D G3DSA:3.40.309.10 889 1086 1.2E-141 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D3790_09235 8f4f119469cec76eb87a92ec36e3b891 1326 Pfam PF00171 Aldehyde dehydrogenase family 666 1112 2.2E-111 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D3790_09235 8f4f119469cec76eb87a92ec36e3b891 1326 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 610 1117 2.9E-244 T 01-11-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 D3790_09235 8f4f119469cec76eb87a92ec36e3b891 1326 PIRSF PIRSF000197 74 1326 0.0 T 01-11-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 D3790_09235 8f4f119469cec76eb87a92ec36e3b891 1326 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 148 259 2.5E-46 T 01-11-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 D3790_09235 8f4f119469cec76eb87a92ec36e3b891 1326 Pfam PF01619 Proline dehydrogenase 270 569 8.7E-99 T 01-11-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 D3790_09235 8f4f119469cec76eb87a92ec36e3b891 1326 SUPERFAMILY SSF47598 4 45 3.19E-10 T 01-11-2018 IPR010985 Ribbon-helix-helix GO:0006355 D3790_05650 1e3c81c84b3b2b4abe53880ab24aa370 167 Pfam PF08534 Redoxin 20 163 4.0E-30 T 01-11-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 D3790_05650 1e3c81c84b3b2b4abe53880ab24aa370 167 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 01-11-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 D3790_05650 1e3c81c84b3b2b4abe53880ab24aa370 167 SUPERFAMILY SSF52833 4 163 6.47E-43 T 01-11-2018 IPR036249 Thioredoxin-like superfamily D3790_05650 1e3c81c84b3b2b4abe53880ab24aa370 167 Hamap MF_00269 Thiol peroxidase [tpx]. 4 167 38.988 T 01-11-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 D3790_05650 1e3c81c84b3b2b4abe53880ab24aa370 167 Gene3D G3DSA:3.40.30.10 1 167 3.3E-48 T 01-11-2018 D3790_08045 1ea2e71d2e8e5bb0915ce6a7bf4d78b1 142 SUPERFAMILY SSF103473 8 129 3.01E-11 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_08045 1ea2e71d2e8e5bb0915ce6a7bf4d78b1 142 Gene3D G3DSA:1.20.1250.20 4 134 6.9E-8 T 01-11-2018 D3790_08985 8661af86d6a5aedf7a662318b040e361 360 SUPERFAMILY SSF88874 205 359 1.83E-23 T 01-11-2018 D3790_08985 8661af86d6a5aedf7a662318b040e361 360 Gene3D G3DSA:3.90.1340.10 206 260 1.7E-14 T 01-11-2018 IPR037053 Phage tail collar domain superfamily D3790_12950 e1f3513e93df51643d477c4993f825c6 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 01-11-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 D3790_12950 e1f3513e93df51643d477c4993f825c6 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 2.4E-140 T 01-11-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 D3790_12950 e1f3513e93df51643d477c4993f825c6 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.069 T 01-11-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 D3790_12950 e1f3513e93df51643d477c4993f825c6 354 SUPERFAMILY SSF51726 2 353 2.96E-122 T 01-11-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 D3790_12950 e1f3513e93df51643d477c4993f825c6 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 4.2E-135 T 01-11-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 D3790_12950 e1f3513e93df51643d477c4993f825c6 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 01-11-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 D3790_12950 e1f3513e93df51643d477c4993f825c6 354 Gene3D G3DSA:3.20.20.210 1 354 4.0E-159 T 01-11-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 D3790_19330 4a59c9d592e15af85280e0b132b3c1f3 238 Gene3D G3DSA:3.40.50.1580 1 237 9.1E-79 T 01-11-2018 D3790_19330 4a59c9d592e15af85280e0b132b3c1f3 238 SUPERFAMILY SSF53167 3 234 2.36E-95 T 01-11-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 D3790_19330 4a59c9d592e15af85280e0b132b3c1f3 238 Pfam PF01048 Phosphorylase superfamily 15 218 6.8E-42 T 01-11-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 D3790_19330 4a59c9d592e15af85280e0b132b3c1f3 238 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 7.1E-124 T 01-11-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 D3790_19330 4a59c9d592e15af85280e0b132b3c1f3 238 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 01-11-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 D3790_19330 4a59c9d592e15af85280e0b132b3c1f3 238 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 53.106 T 01-11-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 D3790_12535 ad78b8637e1371d3b7c1bd93b740312f 378 Pfam PF00684 DnaJ central domain 146 206 1.1E-15 T 01-11-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 D3790_12535 ad78b8637e1371d3b7c1bd93b740312f 378 Gene3D G3DSA:2.60.260.20 254 361 1.3E-27 T 01-11-2018 D3790_12535 ad78b8637e1371d3b7c1bd93b740312f 378 SUPERFAMILY SSF49493 258 343 2.22E-21 T 01-11-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 D3790_12535 ad78b8637e1371d3b7c1bd93b740312f 378 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 372 42.597 T 01-11-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 D3790_12535 ad78b8637e1371d3b7c1bd93b740312f 378 SUPERFAMILY SSF57938 133 209 1.27E-23 T 01-11-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily D3790_12535 ad78b8637e1371d3b7c1bd93b740312f 378 SUPERFAMILY SSF49493 114 259 3.27E-19 T 01-11-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 D3790_12535 ad78b8637e1371d3b7c1bd93b740312f 378 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 01-11-2018 IPR018253 DnaJ domain, conserved site D3790_12535 ad78b8637e1371d3b7c1bd93b740312f 378 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 3.3E-142 T 01-11-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 D3790_12535 ad78b8637e1371d3b7c1bd93b740312f 378 Gene3D G3DSA:2.10.230.10 146 206 2.7E-39 T 01-11-2018 D3790_12535 ad78b8637e1371d3b7c1bd93b740312f 378 PRINTS PR00625 DnaJ domain signature 7 25 1.3E-33 T 01-11-2018 IPR001623 DnaJ domain D3790_12535 ad78b8637e1371d3b7c1bd93b740312f 378 PRINTS PR00625 DnaJ domain signature 25 40 1.3E-33 T 01-11-2018 IPR001623 DnaJ domain D3790_12535 ad78b8637e1371d3b7c1bd93b740312f 378 PRINTS PR00625 DnaJ domain signature 62 81 1.3E-33 T 01-11-2018 IPR001623 DnaJ domain D3790_12535 ad78b8637e1371d3b7c1bd93b740312f 378 PRINTS PR00625 DnaJ domain signature 42 62 1.3E-33 T 01-11-2018 IPR001623 DnaJ domain D3790_12535 ad78b8637e1371d3b7c1bd93b740312f 378 Pfam PF00226 DnaJ domain 5 67 4.6E-29 T 01-11-2018 IPR001623 DnaJ domain D3790_12535 ad78b8637e1371d3b7c1bd93b740312f 378 Gene3D G3DSA:2.60.260.20 116 248 2.7E-39 T 01-11-2018 D3790_12535 ad78b8637e1371d3b7c1bd93b740312f 378 Gene3D G3DSA:1.10.287.110 1 114 7.5E-38 T 01-11-2018 IPR036869 Chaperone J-domain superfamily D3790_12535 ad78b8637e1371d3b7c1bd93b740312f 378 Pfam PF01556 DnaJ C terminal domain 120 332 3.4E-44 T 01-11-2018 IPR002939 Chaperone DnaJ, C-terminal D3790_12535 ad78b8637e1371d3b7c1bd93b740312f 378 SMART SM00271 4 62 6.7E-32 T 01-11-2018 IPR001623 DnaJ domain D3790_12535 ad78b8637e1371d3b7c1bd93b740312f 378 SUPERFAMILY SSF46565 1 107 2.36E-36 T 01-11-2018 IPR036869 Chaperone J-domain superfamily D3790_19515 9842cad8e73656ad8c82875081bb13dc 397 PIRSF PIRSF001434 1 395 1.1E-117 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D3790_19515 9842cad8e73656ad8c82875081bb13dc 397 SUPERFAMILY SSF53383 28 391 5.43E-91 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_19515 9842cad8e73656ad8c82875081bb13dc 397 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 393 6.6E-166 T 01-11-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 D3790_19515 9842cad8e73656ad8c82875081bb13dc 397 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D3790_19515 9842cad8e73656ad8c82875081bb13dc 397 Gene3D G3DSA:3.40.640.10 2 258 1.3E-71 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_19515 9842cad8e73656ad8c82875081bb13dc 397 Gene3D G3DSA:3.90.1150.10 259 394 1.5E-40 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_19515 9842cad8e73656ad8c82875081bb13dc 397 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 391 7.3E-114 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 SUPERFAMILY SSF52777 2238 2432 1.89E-32 T 01-11-2018 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2145 2160 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 SUPERFAMILY SSF47336 3216 3290 4.45E-19 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Pfam PF00501 AMP-binding enzyme 2703 3114 1.1E-104 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Pfam PF00501 AMP-binding enzyme 1598 2011 5.6E-106 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Pfam PF00501 AMP-binding enzyme 518 931 1.0E-105 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1745 1756 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 SUPERFAMILY SSF47336 2113 2185 5.89E-17 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 SUPERFAMILY SSF56801 480 1053 6.54E-164 T 01-11-2018 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1065 1080 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 SUPERFAMILY SSF52777 1320 1585 1.67E-64 T 01-11-2018 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 SUPERFAMILY SSF56801 1556 2134 6.15E-163 T 01-11-2018 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1619 2035 7.3E-141 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 539 955 4.0E-138 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2723 3138 4.8E-138 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Gene3D G3DSA:3.30.559.10 2234 2424 1.0E-39 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Gene3D G3DSA:3.30.300.30 3108 3213 1.8E-35 T 01-11-2018 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Gene3D G3DSA:3.30.300.30 2005 2110 1.3E-33 T 01-11-2018 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 SUPERFAMILY SSF47336 1033 1106 9.16E-20 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Gene3D G3DSA:3.30.559.10 1132 1507 4.4E-151 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 SUPERFAMILY SSF52777 39 252 7.34E-43 T 01-11-2018 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Gene3D G3DSA:1.10.1200.10 1031 1114 1.6E-26 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Gene3D G3DSA:1.10.1200.10 3214 3297 7.8E-25 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 SUPERFAMILY SSF56801 2661 3236 6.15E-164 T 01-11-2018 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Gene3D G3DSA:3.40.50.1820 2111 2212 6.3E-24 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 SMART SM00823 Phosphopantetheine attachment site 2121 2189 3.7E-4 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 SMART SM00823 Phosphopantetheine attachment site 3224 3293 1.5E-6 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 SMART SM00823 Phosphopantetheine attachment site 1041 1110 0.0039 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Gene3D G3DSA:3.30.559.30 1316 1563 4.4E-151 T 01-11-2018 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Pfam PF00668 Condensation domain 43 498 9.8E-103 T 01-11-2018 IPR001242 Condensation domain D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Pfam PF00668 Condensation domain 2240 2682 1.3E-55 T 01-11-2018 IPR001242 Condensation domain D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Pfam PF00668 Condensation domain 1128 1578 2.4E-108 T 01-11-2018 IPR001242 Condensation domain D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2849 2860 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Gene3D G3DSA:3.30.300.30 926 1030 5.9E-35 T 01-11-2018 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 SUPERFAMILY SSF52777 239 504 7.45E-67 T 01-11-2018 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Gene3D G3DSA:3.40.50.12780 507 923 8.3E-142 T 01-11-2018 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Gene3D G3DSA:3.40.50.12780 1588 2003 1.9E-142 T 01-11-2018 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Gene3D G3DSA:3.40.50.12780 2691 3106 2.6E-142 T 01-11-2018 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Pfam PF00550 Phosphopantetheine attachment site 3226 3289 2.4E-14 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Pfam PF00550 Phosphopantetheine attachment site 1042 1104 2.0E-12 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Pfam PF00550 Phosphopantetheine attachment site 2122 2185 2.9E-10 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Gene3D G3DSA:3.30.559.30 2425 2688 2.5E-47 T 01-11-2018 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Pfam PF13193 AMP-binding enzyme C-terminal domain 939 1014 3.9E-10 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Pfam PF13193 AMP-binding enzyme C-terminal domain 3122 3197 6.3E-12 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Pfam PF13193 AMP-binding enzyme C-terminal domain 2019 2094 2.3E-8 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Gene3D G3DSA:3.30.559.10 46 427 1.2E-148 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 SUPERFAMILY SSF52777 2422 2689 2.0E-45 T 01-11-2018 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 ProSitePatterns PS00455 Putative AMP-binding domain signature. 665 676 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 Gene3D G3DSA:3.30.559.30 236 483 1.2E-148 T 01-11-2018 D3790_04935 513b498c18eef0e0675d7b4879c08d69 3326 SUPERFAMILY SSF52777 1125 1332 2.56E-44 T 01-11-2018 D3790_13735 d4a2cd8b752aed3096ecf5c496c2b72c 266 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 01-11-2018 D3790_13735 d4a2cd8b752aed3096ecf5c496c2b72c 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 231 1.4E-26 T 01-11-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 D3790_13735 d4a2cd8b752aed3096ecf5c496c2b72c 266 Gene3D G3DSA:3.30.1240.10 82 186 2.0E-74 T 01-11-2018 D3790_13735 d4a2cd8b752aed3096ecf5c496c2b72c 266 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 8.8E-62 T 01-11-2018 IPR000150 Cof family GO:0016787 D3790_13735 d4a2cd8b752aed3096ecf5c496c2b72c 266 Gene3D G3DSA:3.40.50.1000 5 256 2.0E-74 T 01-11-2018 IPR023214 HAD superfamily D3790_13735 d4a2cd8b752aed3096ecf5c496c2b72c 266 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 01-11-2018 D3790_13735 d4a2cd8b752aed3096ecf5c496c2b72c 266 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 9.9E-61 T 01-11-2018 D3790_13735 d4a2cd8b752aed3096ecf5c496c2b72c 266 SUPERFAMILY SSF56784 1 262 3.08E-65 T 01-11-2018 IPR036412 HAD-like superfamily D3790_11905 47ab4f627c3074eec2c14ed3d69a0e7d 322 Pfam PF07549 SecD/SecF GG Motif 41 66 1.0E-10 T 01-11-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site D3790_11905 47ab4f627c3074eec2c14ed3d69a0e7d 322 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.9E-33 T 01-11-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D3790_11905 47ab4f627c3074eec2c14ed3d69a0e7d 322 PRINTS PR01755 Bacterial translocase SecF protein signature 159 173 1.9E-33 T 01-11-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D3790_11905 47ab4f627c3074eec2c14ed3d69a0e7d 322 PRINTS PR01755 Bacterial translocase SecF protein signature 207 225 1.9E-33 T 01-11-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D3790_11905 47ab4f627c3074eec2c14ed3d69a0e7d 322 PRINTS PR01755 Bacterial translocase SecF protein signature 239 254 1.9E-33 T 01-11-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D3790_11905 47ab4f627c3074eec2c14ed3d69a0e7d 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 126 288 3.5E-57 T 01-11-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D3790_11905 47ab4f627c3074eec2c14ed3d69a0e7d 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 302 28.621 T 01-11-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 D3790_11905 47ab4f627c3074eec2c14ed3d69a0e7d 322 SUPERFAMILY SSF82866 81 302 2.22E-42 T 01-11-2018 D3790_11905 47ab4f627c3074eec2c14ed3d69a0e7d 322 Pfam PF02355 Protein export membrane protein 117 300 1.2E-73 T 01-11-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial D3790_11905 47ab4f627c3074eec2c14ed3d69a0e7d 322 Gene3D G3DSA:1.20.1640.10 110 313 9.5E-16 T 01-11-2018 D3790_11905 47ab4f627c3074eec2c14ed3d69a0e7d 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 291 2.1E-90 T 01-11-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 D3790_14560 b18a24e8c630694d1f8191c29c853f65 265 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 253 6.7E-68 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D3790_14560 b18a24e8c630694d1f8191c29c853f65 265 Pfam PF00230 Major intrinsic protein 5 253 2.8E-64 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D3790_14560 b18a24e8c630694d1f8191c29c853f65 265 Gene3D G3DSA:1.20.1080.10 4 261 1.3E-100 T 01-11-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 D3790_14560 b18a24e8c630694d1f8191c29c853f65 265 PRINTS PR00783 Major intrinsic protein family signature 50 74 1.3E-48 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D3790_14560 b18a24e8c630694d1f8191c29c853f65 265 PRINTS PR00783 Major intrinsic protein family signature 87 106 1.3E-48 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D3790_14560 b18a24e8c630694d1f8191c29c853f65 265 PRINTS PR00783 Major intrinsic protein family signature 153 171 1.3E-48 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D3790_14560 b18a24e8c630694d1f8191c29c853f65 265 PRINTS PR00783 Major intrinsic protein family signature 236 256 1.3E-48 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D3790_14560 b18a24e8c630694d1f8191c29c853f65 265 PRINTS PR00783 Major intrinsic protein family signature 11 30 1.3E-48 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D3790_14560 b18a24e8c630694d1f8191c29c853f65 265 PRINTS PR00783 Major intrinsic protein family signature 186 208 1.3E-48 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D3790_14560 b18a24e8c630694d1f8191c29c853f65 265 SUPERFAMILY SSF81338 11 259 3.4E-77 T 01-11-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 D3790_14560 b18a24e8c630694d1f8191c29c853f65 265 ProSitePatterns PS00221 MIP family signature. 68 76 - T 01-11-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 D3790_12960 0f7256fc6fbdab78e332a4172666f297 258 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 94 125 6.8E-6 T 01-11-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 D3790_12960 0f7256fc6fbdab78e332a4172666f297 258 Gene3D G3DSA:3.90.79.10 127 257 6.5E-37 T 01-11-2018 D3790_12960 0f7256fc6fbdab78e332a4172666f297 258 Pfam PF00293 NUDIX domain 133 234 4.3E-15 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D3790_12960 0f7256fc6fbdab78e332a4172666f297 258 SUPERFAMILY SSF55811 1 96 1.09E-23 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D3790_12960 0f7256fc6fbdab78e332a4172666f297 258 Gene3D G3DSA:3.90.79.20 2 126 1.8E-38 T 01-11-2018 D3790_12960 0f7256fc6fbdab78e332a4172666f297 258 Hamap MF_00297 NADH pyrophosphatase [nudC]. 2 258 41.864 T 01-11-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 D3790_12960 0f7256fc6fbdab78e332a4172666f297 258 SUPERFAMILY SSF55811 79 242 2.8E-36 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D3790_12960 0f7256fc6fbdab78e332a4172666f297 258 ProSitePatterns PS00893 Nudix box signature. 160 181 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D3790_05410 554eb916e616d08a71c76694799ff415 510 Gene3D G3DSA:3.30.420.150 119 297 4.3E-96 T 01-11-2018 D3790_05410 554eb916e616d08a71c76694799ff415 510 Gene3D G3DSA:3.30.420.40 16 305 4.3E-96 T 01-11-2018 D3790_05410 554eb916e616d08a71c76694799ff415 510 Pfam PF02541 Ppx/GppA phosphatase family 28 310 1.2E-94 T 01-11-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 D3790_05410 554eb916e616d08a71c76694799ff415 510 Gene3D G3DSA:3.30.70.2260 459 510 1.7E-23 T 01-11-2018 D3790_05410 554eb916e616d08a71c76694799ff415 510 PIRSF PIRSF001267 5 508 1.7E-199 T 01-11-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 D3790_05410 554eb916e616d08a71c76694799ff415 510 SUPERFAMILY SSF53067 15 135 2.12E-35 T 01-11-2018 D3790_05410 554eb916e616d08a71c76694799ff415 510 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 15 308 1.9E-97 T 01-11-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 D3790_05410 554eb916e616d08a71c76694799ff415 510 Gene3D G3DSA:1.10.3210.10 313 458 1.6E-50 T 01-11-2018 D3790_05410 554eb916e616d08a71c76694799ff415 510 SUPERFAMILY SSF109604 315 508 1.84E-54 T 01-11-2018 D3790_05410 554eb916e616d08a71c76694799ff415 510 SUPERFAMILY SSF53067 139 312 3.13E-47 T 01-11-2018 D3790_05435 5f568510a7772157e4a9b1571b537174 208 Gene3D G3DSA:3.40.50.2020 1 208 4.1E-74 T 01-11-2018 D3790_05435 5f568510a7772157e4a9b1571b537174 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 3.0E-65 T 01-11-2018 D3790_05435 5f568510a7772157e4a9b1571b537174 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 3.2E-90 T 01-11-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 D3790_05435 5f568510a7772157e4a9b1571b537174 208 SUPERFAMILY SSF53271 4 206 4.47E-68 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like D3790_05435 5f568510a7772157e4a9b1571b537174 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.899 T 01-11-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 D3790_12665 aaec97d2193dfe7a23dee9e999a41eee 106 TIGRFAM TIGR01321 TrpR: trp operon repressor 15 104 9.8E-34 T 01-11-2018 IPR013335 Trp repressor, bacterial GO:0006355 D3790_12665 aaec97d2193dfe7a23dee9e999a41eee 106 SUPERFAMILY SSF48295 5 105 2.88E-29 T 01-11-2018 IPR010921 Trp repressor/replication initiator GO:0043565 D3790_12665 aaec97d2193dfe7a23dee9e999a41eee 106 Pfam PF01371 Trp repressor protein 18 103 4.1E-28 T 01-11-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 D3790_12665 aaec97d2193dfe7a23dee9e999a41eee 106 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 10 101 4.0E-34 T 01-11-2018 IPR013335 Trp repressor, bacterial GO:0006355 D3790_12665 aaec97d2193dfe7a23dee9e999a41eee 106 PIRSF PIRSF003196 3 106 4.2E-39 T 01-11-2018 IPR013335 Trp repressor, bacterial GO:0006355 D3790_12665 aaec97d2193dfe7a23dee9e999a41eee 106 Hamap MF_00475 Trp operon repressor [trpR]. 15 106 20.99 T 01-11-2018 IPR013335 Trp repressor, bacterial GO:0006355 D3790_12665 aaec97d2193dfe7a23dee9e999a41eee 106 Gene3D G3DSA:1.10.1270.10 9 106 1.6E-37 T 01-11-2018 IPR038116 TrpR-like superfamily D3790_17585 7b6be216473d07773d180ebe3c09a83c 459 Pfam PF13365 Trypsin-like peptidase domain 96 232 3.7E-31 T 01-11-2018 D3790_17585 7b6be216473d07773d180ebe3c09a83c 459 Gene3D G3DSA:2.30.42.10 373 459 9.1E-21 T 01-11-2018 D3790_17585 7b6be216473d07773d180ebe3c09a83c 459 PRINTS PR00834 HtrA/DegQ protease family signature 106 118 4.1E-58 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D3790_17585 7b6be216473d07773d180ebe3c09a83c 459 PRINTS PR00834 HtrA/DegQ protease family signature 168 192 4.1E-58 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D3790_17585 7b6be216473d07773d180ebe3c09a83c 459 PRINTS PR00834 HtrA/DegQ protease family signature 127 147 4.1E-58 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D3790_17585 7b6be216473d07773d180ebe3c09a83c 459 PRINTS PR00834 HtrA/DegQ protease family signature 203 220 4.1E-58 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D3790_17585 7b6be216473d07773d180ebe3c09a83c 459 PRINTS PR00834 HtrA/DegQ protease family signature 225 242 4.1E-58 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D3790_17585 7b6be216473d07773d180ebe3c09a83c 459 PRINTS PR00834 HtrA/DegQ protease family signature 311 323 4.1E-58 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D3790_17585 7b6be216473d07773d180ebe3c09a83c 459 Gene3D G3DSA:2.30.42.10 269 372 1.6E-28 T 01-11-2018 D3790_17585 7b6be216473d07773d180ebe3c09a83c 459 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 456 1.0E-159 T 01-11-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 D3790_17585 7b6be216473d07773d180ebe3c09a83c 459 SUPERFAMILY SSF50156 229 353 2.76E-23 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 D3790_17585 7b6be216473d07773d180ebe3c09a83c 459 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 381 447 7.6E-9 T 01-11-2018 IPR001478 PDZ domain GO:0005515 D3790_17585 7b6be216473d07773d180ebe3c09a83c 459 SUPERFAMILY SSF50156 387 454 8.41E-14 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 D3790_17585 7b6be216473d07773d180ebe3c09a83c 459 Gene3D G3DSA:2.40.10.120 39 264 4.2E-86 T 01-11-2018 D3790_17585 7b6be216473d07773d180ebe3c09a83c 459 SUPERFAMILY SSF50494 39 263 2.43E-65 T 01-11-2018 IPR009003 Peptidase S1, PA clan D3790_17585 7b6be216473d07773d180ebe3c09a83c 459 SMART SM00228 271 353 1.2E-12 T 01-11-2018 IPR001478 PDZ domain GO:0005515 D3790_17585 7b6be216473d07773d180ebe3c09a83c 459 SMART SM00228 373 450 6.1E-9 T 01-11-2018 IPR001478 PDZ domain GO:0005515 D3790_17585 7b6be216473d07773d180ebe3c09a83c 459 Pfam PF13180 PDZ domain 290 362 3.5E-16 T 01-11-2018 IPR001478 PDZ domain GO:0005515 D3790_05505 df3e068eb2d930b68965aa4d2b004753 722 Pfam PF13718 GNAT acetyltransferase 2 399 513 1.4E-12 T 01-11-2018 IPR000182 GNAT domain D3790_05505 df3e068eb2d930b68965aa4d2b004753 722 Pfam PF13718 GNAT acetyltransferase 2 520 574 7.6E-7 T 01-11-2018 IPR000182 GNAT domain D3790_05505 df3e068eb2d930b68965aa4d2b004753 722 Gene3D G3DSA:3.40.50.11040 4 190 2.5E-55 T 01-11-2018 D3790_05505 df3e068eb2d930b68965aa4d2b004753 722 Pfam PF17176 tRNA-binding domain 578 695 3.5E-42 T 01-11-2018 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain D3790_05505 df3e068eb2d930b68965aa4d2b004753 722 Pfam PF05127 Helicase 195 354 1.3E-37 T 01-11-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 D3790_05505 df3e068eb2d930b68965aa4d2b004753 722 Gene3D G3DSA:3.40.50.12320 191 344 7.6E-42 T 01-11-2018 D3790_05505 df3e068eb2d930b68965aa4d2b004753 722 SUPERFAMILY SSF55729 406 555 1.97E-5 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_05505 df3e068eb2d930b68965aa4d2b004753 722 SUPERFAMILY SSF52540 171 304 4.81E-13 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05505 df3e068eb2d930b68965aa4d2b004753 722 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 19 693 44.829 T 01-11-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 D3790_05505 df3e068eb2d930b68965aa4d2b004753 722 Gene3D G3DSA:3.40.630.30 358 572 1.9E-66 T 01-11-2018 D3790_05505 df3e068eb2d930b68965aa4d2b004753 722 Gene3D G3DSA:1.20.120.890 573 711 1.7E-46 T 01-11-2018 IPR038321 TmcA, C-terminal domain superfamily D3790_03180 0c418e24ee63b50d0ae1047439377da2 154 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 72 151 1.4E-32 T 01-11-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 D3790_03180 0c418e24ee63b50d0ae1047439377da2 154 SUPERFAMILY SSF46767 71 152 2.35E-30 T 01-11-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 D3790_03180 0c418e24ee63b50d0ae1047439377da2 154 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 122 128 - T 01-11-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 D3790_03180 0c418e24ee63b50d0ae1047439377da2 154 Gene3D G3DSA:1.10.10.10 69 154 4.4E-33 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_03180 0c418e24ee63b50d0ae1047439377da2 154 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 73 152 4.9E-30 T 01-11-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 D3790_03180 0c418e24ee63b50d0ae1047439377da2 154 Gene3D G3DSA:3.30.160.70 1 67 1.0E-9 T 01-11-2018 D3790_03180 0c418e24ee63b50d0ae1047439377da2 154 SUPERFAMILY SSF53155 1 77 1.39E-14 T 01-11-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 D3790_03180 0c418e24ee63b50d0ae1047439377da2 154 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 11 152 37.79 T 01-11-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 D3790_01165 db8dddbde7754c9c4fd8cb09af7a1377 314 SUPERFAMILY SSF53807 41 300 2.86E-56 T 01-11-2018 D3790_01165 db8dddbde7754c9c4fd8cb09af7a1377 314 Pfam PF01497 Periplasmic binding protein 70 291 1.4E-26 T 01-11-2018 IPR002491 ABC transporter periplasmic binding domain D3790_01165 db8dddbde7754c9c4fd8cb09af7a1377 314 Gene3D G3DSA:3.40.50.12250 43 296 6.2E-74 T 01-11-2018 D3790_01165 db8dddbde7754c9c4fd8cb09af7a1377 314 Gene3D G3DSA:3.40.50.12260 189 288 6.2E-74 T 01-11-2018 D3790_06665 59d7240cd2451f855faccf854d163536 333 Gene3D G3DSA:3.20.20.140 2 333 2.0E-95 T 01-11-2018 D3790_06665 59d7240cd2451f855faccf854d163536 333 Pfam PF00962 Adenosine/AMP deaminase 6 326 4.4E-90 T 01-11-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 D3790_06665 59d7240cd2451f855faccf854d163536 333 SUPERFAMILY SSF51556 5 326 8.23E-74 T 01-11-2018 IPR032466 Metal-dependent hydrolase D3790_06665 59d7240cd2451f855faccf854d163536 333 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 274 280 - T 01-11-2018 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: R-HSA-74217 D3790_06665 59d7240cd2451f855faccf854d163536 333 Hamap MF_00540 Adenosine deaminase [add]. 1 331 52.696 T 01-11-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 D3790_06665 59d7240cd2451f855faccf854d163536 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 4.3E-108 T 01-11-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 D3790_19160 695e1b9815cc1eca3c94c1f2e6662cd2 259 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 12 254 4.3E-113 T 01-11-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 D3790_19160 695e1b9815cc1eca3c94c1f2e6662cd2 259 Gene3D G3DSA:1.20.1260.10 95 259 6.7E-56 T 01-11-2018 IPR012347 Ferritin-like D3790_19160 695e1b9815cc1eca3c94c1f2e6662cd2 259 Gene3D G3DSA:1.20.1260.10 10 78 5.2E-16 T 01-11-2018 IPR012347 Ferritin-like D3790_19160 695e1b9815cc1eca3c94c1f2e6662cd2 259 PIRSF PIRSF020736 5 259 2.2E-91 T 01-11-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 D3790_19160 695e1b9815cc1eca3c94c1f2e6662cd2 259 SUPERFAMILY SSF47240 13 258 2.16E-74 T 01-11-2018 IPR009078 Ferritin-like superfamily D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 606 50.409 T 01-11-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 Pfam PF00175 Oxidoreductase NAD-binding domain 464 570 3.1E-18 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 Gene3D G3DSA:2.40.30.10 239 446 2.2E-77 T 01-11-2018 D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 426 435 1.2E-28 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 393 400 1.2E-28 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 277 287 1.2E-28 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 463 482 1.2E-28 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 501 512 1.2E-28 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 488 497 1.2E-28 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 532 548 1.2E-28 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 555 563 1.2E-28 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 SUPERFAMILY SSF52343 451 606 1.31E-49 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 SUPERFAMILY SSF63380 236 453 2.65E-66 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 Pfam PF00258 Flavodoxin 66 195 9.3E-28 T 01-11-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 PRINTS PR00369 Flavodoxin signature 64 77 4.0E-12 T 01-11-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 PRINTS PR00369 Flavodoxin signature 112 123 4.0E-12 T 01-11-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 PRINTS PR00369 Flavodoxin signature 168 187 4.0E-12 T 01-11-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 PRINTS PR00369 Flavodoxin signature 144 154 4.0E-12 T 01-11-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 PIRSF PIRSF000207 1 606 2.3E-268 T 01-11-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 606 3.2E-265 T 01-11-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 Gene3D G3DSA:3.40.50.80 452 606 3.4E-56 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 Pfam PF00667 FAD binding domain 239 431 2.5E-28 T 01-11-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 Gene3D G3DSA:3.40.50.360 57 215 2.7E-45 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 SUPERFAMILY SSF52218 62 212 1.58E-41 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_19085 71b4afe2a6f49a55515546d0ccbada00 606 Gene3D G3DSA:1.20.990.10 287 391 2.2E-77 T 01-11-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 D3790_15300 ed9b1145c9d5a3b44f61411bd83ed53f 272 PIRSF PIRSF000398 1 272 2.3E-67 T 01-11-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 D3790_15300 ed9b1145c9d5a3b44f61411bd83ed53f 272 Gene3D G3DSA:1.10.1020.10 57 156 4.9E-88 T 01-11-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 D3790_15300 ed9b1145c9d5a3b44f61411bd83ed53f 272 SUPERFAMILY SSF53335 5 268 7.43E-75 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_15300 ed9b1145c9d5a3b44f61411bd83ed53f 272 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 6.6E-99 T 01-11-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D3790_15300 ed9b1145c9d5a3b44f61411bd83ed53f 272 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 2.5E-19 T 01-11-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D3790_15300 ed9b1145c9d5a3b44f61411bd83ed53f 272 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 2.5E-19 T 01-11-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D3790_15300 ed9b1145c9d5a3b44f61411bd83ed53f 272 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 2.5E-19 T 01-11-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D3790_15300 ed9b1145c9d5a3b44f61411bd83ed53f 272 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 2.5E-19 T 01-11-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D3790_15300 ed9b1145c9d5a3b44f61411bd83ed53f 272 Gene3D G3DSA:3.40.50.150 7 239 4.9E-88 T 01-11-2018 D3790_15300 ed9b1145c9d5a3b44f61411bd83ed53f 272 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D3790_15300 ed9b1145c9d5a3b44f61411bd83ed53f 272 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 3.2E-74 T 01-11-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 5 627 0.0 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR00418 DNA topoisomerase II family signature 498 515 1.1E-59 T 01-11-2018 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR00418 DNA topoisomerase II family signature 561 577 1.1E-59 T 01-11-2018 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR00418 DNA topoisomerase II family signature 110 124 1.1E-59 T 01-11-2018 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR00418 DNA topoisomerase II family signature 518 530 1.1E-59 T 01-11-2018 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR00418 DNA topoisomerase II family signature 267 280 1.1E-59 T 01-11-2018 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR00418 DNA topoisomerase II family signature 32 47 1.1E-59 T 01-11-2018 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR00418 DNA topoisomerase II family signature 67 80 1.1E-59 T 01-11-2018 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR00418 DNA topoisomerase II family signature 480 496 1.1E-59 T 01-11-2018 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR00418 DNA topoisomerase II family signature 415 429 1.1E-59 T 01-11-2018 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 621 2.0E-24 T 01-11-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 Pfam PF00204 DNA gyrase B 219 385 1.4E-38 T 01-11-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 SMART SM00433 35 625 8.4E-205 T 01-11-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 SUPERFAMILY SSF54211 218 383 7.4E-45 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 Gene3D G3DSA:3.30.565.10 3 216 9.9E-77 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 629 47.139 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 SMART SM00387 28 174 5.7E-22 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 172 2.8E-18 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 SUPERFAMILY SSF56719 389 623 7.32E-78 T 01-11-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 01-11-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 Pfam PF01751 Toprim domain 414 520 1.8E-12 T 01-11-2018 IPR006171 TOPRIM domain D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 SUPERFAMILY SSF55874 6 216 9.3E-68 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 Gene3D G3DSA:3.40.50.670 391 624 2.7E-93 T 01-11-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 Gene3D G3DSA:3.30.230.10 217 390 5.3E-56 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 2.8E-144 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 2.8E-144 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 2.8E-144 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 2.8E-144 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 2.8E-144 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 2.8E-144 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 2.8E-144 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 2.8E-144 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 2.8E-144 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 2.8E-144 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 2.8E-144 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 2.8E-144 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 2.8E-144 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_18060 7828a150c9cbbaaff0437e4db686dc24 631 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 2.8E-144 T 01-11-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 2 633 41.632 T 01-11-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 Gene3D G3DSA:1.20.58.930 362 457 1.2E-229 T 01-11-2018 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 76 343 3.9E-65 T 01-11-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 SUPERFAMILY SSF51419 68 345 4.11E-67 T 01-11-2018 IPR029066 PLP-binding barrel D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 SUPERFAMILY SSF50621 459 561 3.49E-7 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 Gene3D G3DSA:2.40.37.10 13 566 1.2E-229 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 PRINTS PR01180 Arginine decarboxylase signature 542 563 1.7E-72 T 01-11-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 PRINTS PR01180 Arginine decarboxylase signature 489 514 1.7E-72 T 01-11-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 PRINTS PR01180 Arginine decarboxylase signature 323 340 1.7E-72 T 01-11-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 PRINTS PR01180 Arginine decarboxylase signature 172 193 1.7E-72 T 01-11-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 PRINTS PR01180 Arginine decarboxylase signature 92 106 1.7E-72 T 01-11-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 PRINTS PR01180 Arginine decarboxylase signature 196 218 1.7E-72 T 01-11-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 PRINTS PR01180 Arginine decarboxylase signature 68 83 1.7E-72 T 01-11-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 PRINTS PR01180 Arginine decarboxylase signature 464 485 1.7E-72 T 01-11-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 PRINTS PR01180 Arginine decarboxylase signature 146 161 1.7E-72 T 01-11-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 TIGRFAM TIGR01273 speA: arginine decarboxylase 7 632 8.6E-264 T 01-11-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 Gene3D G3DSA:3.20.20.10 69 345 1.2E-229 T 01-11-2018 IPR029066 PLP-binding barrel D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 PIRSF PIRSF001336 3 634 2.6E-248 T 01-11-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 100 118 2.0E-18 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 122 134 2.0E-18 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 333 352 2.0E-18 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 239 252 2.0E-18 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D3790_11120 bff9c91fdae69dd6220cd8f27ac0f9a8 634 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 542 555 2.0E-18 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D3790_14140 cd2ade55df70dfcee4574b32401de264 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 01-11-2018 IPR018102 Ribosomal S11, conserved site D3790_14140 cd2ade55df70dfcee4574b32401de264 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 1.8E-55 T 01-11-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14140 cd2ade55df70dfcee4574b32401de264 129 Pfam PF00411 Ribosomal protein S11 19 128 1.6E-54 T 01-11-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 D3790_14140 cd2ade55df70dfcee4574b32401de264 129 SUPERFAMILY SSF53137 14 129 3.79E-48 T 01-11-2018 D3790_14140 cd2ade55df70dfcee4574b32401de264 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.674 T 01-11-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 D3790_14140 cd2ade55df70dfcee4574b32401de264 129 PIRSF PIRSF002131 1 129 5.0E-53 T 01-11-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 D3790_14140 cd2ade55df70dfcee4574b32401de264 129 Gene3D G3DSA:3.30.420.80 1 129 9.0E-59 T 01-11-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 D3790_01485 e193be24271385c57be5b183a1737996 316 Gene3D G3DSA:3.90.245.10 2 315 7.2E-122 T 01-11-2018 IPR036452 Ribonucleoside hydrolase-like D3790_01485 e193be24271385c57be5b183a1737996 316 SUPERFAMILY SSF53590 3 311 1.96E-103 T 01-11-2018 IPR036452 Ribonucleoside hydrolase-like D3790_01485 e193be24271385c57be5b183a1737996 316 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 302 2.6E-93 T 01-11-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain D3790_01485 e193be24271385c57be5b183a1737996 316 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 9 19 - T 01-11-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 D3790_14235 985a3b22608cd9c97666b2036184ad01 92 Pfam PF00203 Ribosomal protein S19 3 83 1.9E-36 T 01-11-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14235 985a3b22608cd9c97666b2036184ad01 92 Gene3D G3DSA:3.30.860.10 1 92 7.7E-44 T 01-11-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14235 985a3b22608cd9c97666b2036184ad01 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.1E-24 T 01-11-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14235 985a3b22608cd9c97666b2036184ad01 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.1E-24 T 01-11-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14235 985a3b22608cd9c97666b2036184ad01 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.1E-24 T 01-11-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14235 985a3b22608cd9c97666b2036184ad01 92 SUPERFAMILY SSF54570 3 84 9.68E-36 T 01-11-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14235 985a3b22608cd9c97666b2036184ad01 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.691 T 01-11-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14235 985a3b22608cd9c97666b2036184ad01 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 01-11-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14235 985a3b22608cd9c97666b2036184ad01 92 PIRSF PIRSF002144 1 92 6.0E-32 T 01-11-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14235 985a3b22608cd9c97666b2036184ad01 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 2.3E-46 T 01-11-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 D3790_17970 b10d63065041d8bd52b453c071d8b037 345 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 337 62.753 T 01-11-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 D3790_17970 b10d63065041d8bd52b453c071d8b037 345 SUPERFAMILY SSF53067 101 314 1.99E-42 T 01-11-2018 D3790_17970 b10d63065041d8bd52b453c071d8b037 345 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 312 9.5E-128 T 01-11-2018 IPR017861 Kae1/TsaD family D3790_17970 b10d63065041d8bd52b453c071d8b037 345 Gene3D G3DSA:3.30.420.40 129 299 1.7E-131 T 01-11-2018 D3790_17970 b10d63065041d8bd52b453c071d8b037 345 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 01-11-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 D3790_17970 b10d63065041d8bd52b453c071d8b037 345 Gene3D G3DSA:3.30.420.40 3 320 1.7E-131 T 01-11-2018 D3790_17970 b10d63065041d8bd52b453c071d8b037 345 SUPERFAMILY SSF53067 3 123 1.47E-31 T 01-11-2018 D3790_17970 b10d63065041d8bd52b453c071d8b037 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 6.9E-53 T 01-11-2018 IPR017861 Kae1/TsaD family D3790_17970 b10d63065041d8bd52b453c071d8b037 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 269 278 6.9E-53 T 01-11-2018 IPR017861 Kae1/TsaD family D3790_17970 b10d63065041d8bd52b453c071d8b037 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 6.9E-53 T 01-11-2018 IPR017861 Kae1/TsaD family D3790_17970 b10d63065041d8bd52b453c071d8b037 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 6.9E-53 T 01-11-2018 IPR017861 Kae1/TsaD family D3790_17970 b10d63065041d8bd52b453c071d8b037 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 6.9E-53 T 01-11-2018 IPR017861 Kae1/TsaD family D3790_17970 b10d63065041d8bd52b453c071d8b037 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 6.9E-53 T 01-11-2018 IPR017861 Kae1/TsaD family D3790_17970 b10d63065041d8bd52b453c071d8b037 345 Pfam PF00814 Glycoprotease family 24 312 1.9E-102 T 01-11-2018 IPR000905 Gcp-like domain D3790_17970 b10d63065041d8bd52b453c071d8b037 345 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 319 3.5E-135 T 01-11-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 D3790_10475 d272d2d8285dafaa6fb845df4fe3bacb 275 Gene3D G3DSA:3.40.50.300 1 263 3.7E-63 T 01-11-2018 D3790_10475 d272d2d8285dafaa6fb845df4fe3bacb 275 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_10475 d272d2d8285dafaa6fb845df4fe3bacb 275 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 11 199 1.7E-78 T 01-11-2018 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 D3790_10475 d272d2d8285dafaa6fb845df4fe3bacb 275 Pfam PF00005 ABC transporter 17 165 1.8E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_10475 d272d2d8285dafaa6fb845df4fe3bacb 275 SMART SM00382 26 213 1.1E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_10475 d272d2d8285dafaa6fb845df4fe3bacb 275 SUPERFAMILY SSF52540 2 227 1.25E-53 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_02115 8e9bca0304105485a7d6a97608219580 345 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 29 339 8.8E-136 T 01-11-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 D3790_02115 8e9bca0304105485a7d6a97608219580 345 Pfam PF13531 Bacterial extracellular solute-binding protein 46 293 2.8E-37 T 01-11-2018 D3790_02115 8e9bca0304105485a7d6a97608219580 345 Gene3D G3DSA:3.40.190.10 39 308 1.3E-108 T 01-11-2018 D3790_02115 8e9bca0304105485a7d6a97608219580 345 Gene3D G3DSA:3.40.190.10 127 338 1.3E-108 T 01-11-2018 D3790_02115 8e9bca0304105485a7d6a97608219580 345 SUPERFAMILY SSF53850 31 339 9.06E-72 T 01-11-2018 D3790_00695 84cc712a268ad816f98761d1cd21b381 664 SUPERFAMILY SSF57783 602 647 1.07E-7 T 01-11-2018 D3790_00695 84cc712a268ad816f98761d1cd21b381 664 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 616 645 1.7E-8 T 01-11-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 D3790_00695 84cc712a268ad816f98761d1cd21b381 664 SMART SM00493 1 123 4.9E-23 T 01-11-2018 IPR006171 TOPRIM domain D3790_00695 84cc712a268ad816f98761d1cd21b381 664 Gene3D G3DSA:1.10.290.10 281 410 1.7E-151 T 01-11-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 D3790_00695 84cc712a268ad816f98761d1cd21b381 664 Gene3D G3DSA:2.70.20.10 212 483 1.7E-151 T 01-11-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 D3790_00695 84cc712a268ad816f98761d1cd21b381 664 Pfam PF01131 DNA topoisomerase 150 587 2.7E-113 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_00695 84cc712a268ad816f98761d1cd21b381 664 SMART SM00437 272 553 3.2E-66 T 01-11-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 D3790_00695 84cc712a268ad816f98761d1cd21b381 664 Gene3D G3DSA:1.10.460.10 158 597 1.7E-151 T 01-11-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 D3790_00695 84cc712a268ad816f98761d1cd21b381 664 Pfam PF01751 Toprim domain 2 130 2.6E-20 T 01-11-2018 IPR006171 TOPRIM domain D3790_00695 84cc712a268ad816f98761d1cd21b381 664 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 188 206 1.3E-25 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_00695 84cc712a268ad816f98761d1cd21b381 664 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 315 324 1.3E-25 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_00695 84cc712a268ad816f98761d1cd21b381 664 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 516 530 1.3E-25 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_00695 84cc712a268ad816f98761d1cd21b381 664 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 1.3E-25 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_00695 84cc712a268ad816f98761d1cd21b381 664 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 97 110 1.3E-25 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_00695 84cc712a268ad816f98761d1cd21b381 664 Gene3D G3DSA:3.40.50.140 1 150 1.3E-50 T 01-11-2018 D3790_00695 84cc712a268ad816f98761d1cd21b381 664 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 309 324 - T 01-11-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 D3790_00695 84cc712a268ad816f98761d1cd21b381 664 SUPERFAMILY SSF56712 1 601 1.44E-177 T 01-11-2018 IPR023405 DNA topoisomerase, type IA, core domain D3790_00695 84cc712a268ad816f98761d1cd21b381 664 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 659 2.7E-244 T 01-11-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 D3790_00695 84cc712a268ad816f98761d1cd21b381 664 SMART SM00436 123 218 2.1E-29 T 01-11-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 D3790_12340 601ae57ca4fc243f6ca09b85577917db 489 Pfam PF10150 Ribonuclease E/G family 124 393 3.4E-101 T 01-11-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 D3790_12340 601ae57ca4fc243f6ca09b85577917db 489 Pfam PF00575 S1 RNA binding domain 38 109 9.1E-7 T 01-11-2018 IPR003029 S1 domain GO:0003676 D3790_12340 601ae57ca4fc243f6ca09b85577917db 489 SMART SM00316 37 122 1.2E-9 T 01-11-2018 IPR022967 RNA-binding domain, S1 D3790_12340 601ae57ca4fc243f6ca09b85577917db 489 Gene3D G3DSA:3.40.1260.20 403 488 2.1E-5 T 01-11-2018 D3790_12340 601ae57ca4fc243f6ca09b85577917db 489 Gene3D G3DSA:2.40.50.140 31 127 1.9E-30 T 01-11-2018 D3790_12340 601ae57ca4fc243f6ca09b85577917db 489 SUPERFAMILY SSF50249 39 128 1.11E-18 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_12340 601ae57ca4fc243f6ca09b85577917db 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 3.8E-171 T 01-11-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 D3790_11305 9276b55acd56b12c79fa2e86dfc73153 434 SUPERFAMILY SSF102735 1 131 1.44E-40 T 01-11-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 D3790_11305 9276b55acd56b12c79fa2e86dfc73153 434 Hamap MF_00303 Trigger factor [tig]. 1 418 22.398 T 01-11-2018 IPR005215 Trigger factor GO:0015031 D3790_11305 9276b55acd56b12c79fa2e86dfc73153 434 Gene3D G3DSA:1.10.3120.10 116 417 2.5E-113 T 01-11-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 D3790_11305 9276b55acd56b12c79fa2e86dfc73153 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 3.3E-40 T 01-11-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 D3790_11305 9276b55acd56b12c79fa2e86dfc73153 434 Gene3D G3DSA:3.10.50.40 150 246 2.5E-113 T 01-11-2018 D3790_11305 9276b55acd56b12c79fa2e86dfc73153 434 SUPERFAMILY SSF54534 90 241 3.73E-38 T 01-11-2018 D3790_11305 9276b55acd56b12c79fa2e86dfc73153 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 5.5E-43 T 01-11-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 D3790_11305 9276b55acd56b12c79fa2e86dfc73153 434 SUPERFAMILY SSF109998 248 429 3.92E-48 T 01-11-2018 IPR027304 Trigger factor/SurA domain superfamily D3790_11305 9276b55acd56b12c79fa2e86dfc73153 434 TIGRFAM TIGR00115 tig: trigger factor 13 412 2.3E-144 T 01-11-2018 IPR005215 Trigger factor GO:0015031 D3790_11305 9276b55acd56b12c79fa2e86dfc73153 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 236 4.2E-15 T 01-11-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D3790_11305 9276b55acd56b12c79fa2e86dfc73153 434 PIRSF PIRSF003095 1 434 8.4E-133 T 01-11-2018 IPR005215 Trigger factor GO:0015031 D3790_11305 9276b55acd56b12c79fa2e86dfc73153 434 Gene3D G3DSA:3.30.70.1050 1 115 5.9E-43 T 01-11-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 D3790_10945 2998b09a2d57e8838af9761bddc9e5ec 306 Gene3D G3DSA:3.30.470.20 85 301 4.0E-78 T 01-11-2018 D3790_10945 2998b09a2d57e8838af9761bddc9e5ec 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 35.44 T 01-11-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D3790_10945 2998b09a2d57e8838af9761bddc9e5ec 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 01-11-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D3790_10945 2998b09a2d57e8838af9761bddc9e5ec 306 SUPERFAMILY SSF52440 3 96 3.45E-28 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily D3790_10945 2998b09a2d57e8838af9761bddc9e5ec 306 Gene3D G3DSA:3.40.50.20 1 84 4.9E-31 T 01-11-2018 D3790_10945 2998b09a2d57e8838af9761bddc9e5ec 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 6.9E-103 T 01-11-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D3790_10945 2998b09a2d57e8838af9761bddc9e5ec 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 01-11-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D3790_10945 2998b09a2d57e8838af9761bddc9e5ec 306 Gene3D G3DSA:3.30.1490.20 111 183 4.0E-78 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D3790_10945 2998b09a2d57e8838af9761bddc9e5ec 306 PIRSF PIRSF039102 36 306 4.8E-89 T 01-11-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D3790_10945 2998b09a2d57e8838af9761bddc9e5ec 306 PIRSF PIRSF039102 1 45 3.9E-8 T 01-11-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D3790_10945 2998b09a2d57e8838af9761bddc9e5ec 306 SUPERFAMILY SSF56059 97 302 1.06E-58 T 01-11-2018 D3790_10945 2998b09a2d57e8838af9761bddc9e5ec 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 303 2.0E-60 T 01-11-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D3790_10945 2998b09a2d57e8838af9761bddc9e5ec 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 8.0E-18 T 01-11-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 Gene3D G3DSA:3.40.50.10190 586 672 9.2E-28 T 01-11-2018 IPR036420 BRCT domain superfamily D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 598 669 9.0E-15 T 01-11-2018 IPR001357 BRCT domain D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 Gene3D G3DSA:3.30.1490.70 78 316 6.0E-102 T 01-11-2018 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 Gene3D G3DSA:2.20.70.80 391 431 4.6E-19 T 01-11-2018 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 Gene3D G3DSA:3.30.470.30 70 253 6.0E-102 T 01-11-2018 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 SMART SM00532 3 448 1.8E-284 T 01-11-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 SMART SM00278 446 465 2.4 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 SMART SM00278 480 499 0.48 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 SMART SM00278 512 531 1900.0 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 SMART SM00278 544 563 550.0 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 SMART SM00292 596 672 2.2E-15 T 01-11-2018 IPR001357 BRCT domain D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 Pfam PF12826 Helix-hairpin-helix motif 510 573 2.8E-23 T 01-11-2018 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 SUPERFAMILY SSF50249 318 399 2.91E-29 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 01-11-2018 IPR018239 NAD-dependent DNA ligase, active site D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 PIRSF PIRSF001604 1 672 1.6E-254 T 01-11-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 Gene3D G3DSA:1.10.150.20 432 505 1.4E-30 T 01-11-2018 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 318 3.1E-137 T 01-11-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 Gene3D G3DSA:1.10.150.20 506 585 2.3E-27 T 01-11-2018 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 Gene3D G3DSA:1.10.287.610 1 69 2.9E-30 T 01-11-2018 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 SUPERFAMILY SSF52113 597 671 4.74E-20 T 01-11-2018 IPR036420 BRCT domain superfamily D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 Gene3D G3DSA:2.40.50.140 317 390 2.1E-35 T 01-11-2018 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 Pfam PF14520 Helix-hairpin-helix domain 446 502 6.3E-7 T 01-11-2018 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 1.2E-36 T 01-11-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 SUPERFAMILY SSF47781 403 578 1.93E-60 T 01-11-2018 IPR010994 RuvA domain 2-like D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 01-11-2018 IPR033136 NAD-dependent DNA ligase, conserved site D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 SUPERFAMILY SSF56091 2 316 1.5E-122 T 01-11-2018 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 Hamap MF_01588 DNA ligase [ligA]. 2 670 53.511 T 01-11-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 666 1.5E-272 T 01-11-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 D3790_04435 d63fee0535cb8c7e302fc3ad630748c3 672 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 6.2E-11 T 01-11-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 D3790_00380 b08a81d4627048e09b9c6c884983ef04 1088 Pfam PF09134 Invasin, domain 3 808 893 5.6E-11 T 01-11-2018 IPR015217 Invasin, domain 3 D3790_00380 b08a81d4627048e09b9c6c884983ef04 1088 SUPERFAMILY SSF49373 808 897 7.85E-20 T 01-11-2018 IPR008964 Invasin/intimin cell-adhesion fragments D3790_00380 b08a81d4627048e09b9c6c884983ef04 1088 Gene3D G3DSA:2.60.40.10 715 803 3.7E-14 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_00380 b08a81d4627048e09b9c6c884983ef04 1088 Gene3D G3DSA:2.60.40.10 528 616 2.8E-17 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_00380 b08a81d4627048e09b9c6c884983ef04 1088 Gene3D G3DSA:2.60.40.10 620 709 2.7E-16 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_00380 b08a81d4627048e09b9c6c884983ef04 1088 Gene3D G3DSA:2.60.40.10 808 899 1.5E-20 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_00380 b08a81d4627048e09b9c6c884983ef04 1088 Gene3D G3DSA:2.60.40.10 433 521 5.3E-19 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_00380 b08a81d4627048e09b9c6c884983ef04 1088 SUPERFAMILY SSF49373 620 702 7.26E-15 T 01-11-2018 IPR008964 Invasin/intimin cell-adhesion fragments D3790_00380 b08a81d4627048e09b9c6c884983ef04 1088 Pfam PF02369 Bacterial Ig-like domain (group 1) 440 515 1.6E-11 T 01-11-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain D3790_00380 b08a81d4627048e09b9c6c884983ef04 1088 SMART SM00634 713 799 1.9E-6 T 01-11-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain D3790_00380 b08a81d4627048e09b9c6c884983ef04 1088 SMART SM00634 807 895 2.2E-16 T 01-11-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain D3790_00380 b08a81d4627048e09b9c6c884983ef04 1088 SMART SM00634 619 703 6.3E-7 T 01-11-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain D3790_00380 b08a81d4627048e09b9c6c884983ef04 1088 SMART SM00634 525 613 4.2E-10 T 01-11-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain D3790_00380 b08a81d4627048e09b9c6c884983ef04 1088 SMART SM00634 431 518 5.1E-13 T 01-11-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain D3790_00380 b08a81d4627048e09b9c6c884983ef04 1088 Gene3D G3DSA:2.40.160.160 89 333 6.4E-92 T 01-11-2018 IPR038177 Inverse autotransporter, beta-domain superfamily D3790_00380 b08a81d4627048e09b9c6c884983ef04 1088 Pfam PF11924 Inverse autotransporter, beta-domain 53 325 2.6E-95 T 01-11-2018 IPR024519 Inverse autotransporter, beta-domain D3790_00380 b08a81d4627048e09b9c6c884983ef04 1088 SUPERFAMILY SSF49373 715 802 3.34E-16 T 01-11-2018 IPR008964 Invasin/intimin cell-adhesion fragments D3790_00380 b08a81d4627048e09b9c6c884983ef04 1088 SUPERFAMILY SSF49373 433 523 5.89E-18 T 01-11-2018 IPR008964 Invasin/intimin cell-adhesion fragments D3790_00380 b08a81d4627048e09b9c6c884983ef04 1088 SUPERFAMILY SSF49373 528 613 1.81E-17 T 01-11-2018 IPR008964 Invasin/intimin cell-adhesion fragments D3790_13840 a05fe9323a24ec783077d19ebd685e5c 401 Gene3D G3DSA:1.25.40.10 77 241 3.2E-6 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_13840 a05fe9323a24ec783077d19ebd685e5c 401 Gene3D G3DSA:1.25.40.10 312 398 1.9E-6 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_13840 a05fe9323a24ec783077d19ebd685e5c 401 Pfam PF07219 HemY protein N-terminus 26 133 1.3E-28 T 01-11-2018 IPR010817 HemY, N-terminal D3790_13840 a05fe9323a24ec783077d19ebd685e5c 401 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 387 1.1E-106 T 01-11-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 D3790_13840 a05fe9323a24ec783077d19ebd685e5c 401 SUPERFAMILY SSF48452 318 384 5.06E-6 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_13840 a05fe9323a24ec783077d19ebd685e5c 401 SUPERFAMILY SSF48452 96 383 1.3E-5 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_00050 8e993d575717c5929902b5ff600ddd5d 99 SUPERFAMILY SSF46689 1 75 4.66E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_00050 8e993d575717c5929902b5ff600ddd5d 99 Pfam PF01527 Transposase 3 69 1.4E-7 T 01-11-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D3790_19725 8e993d575717c5929902b5ff600ddd5d 99 SUPERFAMILY SSF46689 1 75 4.66E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_19725 8e993d575717c5929902b5ff600ddd5d 99 Pfam PF01527 Transposase 3 69 1.4E-7 T 01-11-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D3790_09090 31dc5ff2befac84ea5c0907e379bc5be 169 Gene3D G3DSA:1.20.141.10 6 168 1.8E-49 T 01-11-2018 D3790_09090 31dc5ff2befac84ea5c0907e379bc5be 169 SUPERFAMILY SSF53955 8 164 8.15E-46 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily D3790_09090 31dc5ff2befac84ea5c0907e379bc5be 169 Pfam PF09374 Predicted Peptidoglycan domain 93 158 7.0E-16 T 01-11-2018 IPR018537 Peptidoglycan binding domain D3790_09090 31dc5ff2befac84ea5c0907e379bc5be 169 Pfam PF05838 Glycosyl hydrolase 108 14 89 6.3E-26 T 01-11-2018 IPR008565 Protein of unknown function DUF847 D3790_17360 b8f0316506f39132ef139aa2c5328178 306 Gene3D G3DSA:3.40.1350.10 20 129 1.2E-7 T 01-11-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 D3790_17360 b8f0316506f39132ef139aa2c5328178 306 Pfam PF01939 Endonuclease NucS 22 97 1.4E-4 T 01-11-2018 IPR002793 Endonuclease NucS GO:0004519 D3790_12870 59a319a9c04134db5d16d3c63f3a2a8f 587 SUPERFAMILY SSF52440 7 118 3.53E-45 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily D3790_12870 59a319a9c04134db5d16d3c63f3a2a8f 587 SMART SM00878 341 450 3.2E-56 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D3790_12870 59a319a9c04134db5d16d3c63f3a2a8f 587 Pfam PF00289 Biotin carboxylase, N-terminal domain 8 116 1.1E-41 T 01-11-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D3790_12870 59a319a9c04134db5d16d3c63f3a2a8f 587 Pfam PF02785 Biotin carboxylase C-terminal domain 341 450 6.3E-35 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D3790_12870 59a319a9c04134db5d16d3c63f3a2a8f 587 Pfam PF00364 Biotin-requiring enzyme 520 586 4.6E-12 T 01-11-2018 IPR000089 Biotin/lipoyl attachment D3790_12870 59a319a9c04134db5d16d3c63f3a2a8f 587 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 544 561 - T 01-11-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D3790_12870 59a319a9c04134db5d16d3c63f3a2a8f 587 SUPERFAMILY SSF51246 335 451 9.42E-37 T 01-11-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 D3790_12870 59a319a9c04134db5d16d3c63f3a2a8f 587 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 292 299 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D3790_12870 59a319a9c04134db5d16d3c63f3a2a8f 587 Gene3D G3DSA:3.30.470.130 2 455 2.9E-175 T 01-11-2018 D3790_12870 59a319a9c04134db5d16d3c63f3a2a8f 587 SUPERFAMILY SSF56059 121 329 1.94E-57 T 01-11-2018 D3790_12870 59a319a9c04134db5d16d3c63f3a2a8f 587 SUPERFAMILY SSF51230 512 586 3.14E-16 T 01-11-2018 IPR011053 Single hybrid motif D3790_12870 59a319a9c04134db5d16d3c63f3a2a8f 587 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 121 328 3.6E-78 T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D3790_12870 59a319a9c04134db5d16d3c63f3a2a8f 587 Gene3D G3DSA:2.40.50.100 517 587 3.2E-20 T 01-11-2018 D3790_14005 574c1e0513b0d9b17fcccbdf42930b3e 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 1.3E-216 T 01-11-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 D3790_14005 574c1e0513b0d9b17fcccbdf42930b3e 548 SUPERFAMILY SSF52518 357 545 2.14E-64 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_14005 574c1e0513b0d9b17fcccbdf42930b3e 548 SUPERFAMILY SSF52467 181 342 3.27E-58 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily D3790_14005 574c1e0513b0d9b17fcccbdf42930b3e 548 Gene3D G3DSA:3.40.50.970 1 171 4.0E-69 T 01-11-2018 D3790_14005 574c1e0513b0d9b17fcccbdf42930b3e 548 SUPERFAMILY SSF52518 1 175 1.59E-62 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_14005 574c1e0513b0d9b17fcccbdf42930b3e 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 01-11-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 D3790_14005 574c1e0513b0d9b17fcccbdf42930b3e 548 Gene3D G3DSA:3.40.50.1220 188 343 6.3E-119 T 01-11-2018 D3790_14005 574c1e0513b0d9b17fcccbdf42930b3e 548 Gene3D G3DSA:3.40.50.970 344 522 6.3E-119 T 01-11-2018 D3790_14005 574c1e0513b0d9b17fcccbdf42930b3e 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 165 7.6E-58 T 01-11-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 D3790_14005 574c1e0513b0d9b17fcccbdf42930b3e 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 188 319 3.8E-42 T 01-11-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 D3790_14005 574c1e0513b0d9b17fcccbdf42930b3e 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 6.3E-49 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 D3790_12705 fa03510c656b6457b8d4dd5923accf85 117 Pfam PF06836 Protein of unknown function (DUF1240) 25 117 1.6E-35 T 01-11-2018 IPR010665 Protein of unknown function DUF1240 D3790_03025 f0f774a645e71d7cba2bf58b1bc3fe8e 384 Gene3D G3DSA:3.40.190.10 106 279 7.2E-56 T 01-11-2018 D3790_03025 f0f774a645e71d7cba2bf58b1bc3fe8e 384 SMART SM00830 9 89 1.5E-23 T 01-11-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D3790_03025 f0f774a645e71d7cba2bf58b1bc3fe8e 384 Pfam PF01817 Chorismate mutase type II 9 87 2.8E-16 T 01-11-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D3790_03025 f0f774a645e71d7cba2bf58b1bc3fe8e 384 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 5 87 9.2E-30 T 01-11-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 D3790_03025 f0f774a645e71d7cba2bf58b1bc3fe8e 384 SUPERFAMILY SSF55021 278 375 6.23E-23 T 01-11-2018 D3790_03025 f0f774a645e71d7cba2bf58b1bc3fe8e 384 PIRSF PIRSF001500 1 378 1.7E-141 T 01-11-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 D3790_03025 f0f774a645e71d7cba2bf58b1bc3fe8e 384 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 259 281 - T 01-11-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 D3790_03025 f0f774a645e71d7cba2bf58b1bc3fe8e 384 Pfam PF00800 Prephenate dehydratase 104 285 1.1E-60 T 01-11-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 D3790_03025 f0f774a645e71d7cba2bf58b1bc3fe8e 384 Gene3D G3DSA:3.30.70.260 289 377 4.8E-23 T 01-11-2018 D3790_03025 f0f774a645e71d7cba2bf58b1bc3fe8e 384 Gene3D G3DSA:1.20.59.10 1 105 5.0E-32 T 01-11-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D3790_03025 f0f774a645e71d7cba2bf58b1bc3fe8e 384 SUPERFAMILY SSF48600 4 91 8.06E-21 T 01-11-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D3790_03025 f0f774a645e71d7cba2bf58b1bc3fe8e 384 Gene3D G3DSA:3.40.190.10 187 272 7.2E-56 T 01-11-2018 D3790_03025 f0f774a645e71d7cba2bf58b1bc3fe8e 384 SUPERFAMILY SSF53850 103 289 7.49E-56 T 01-11-2018 D3790_06430 0ef939eda092682c90f1185dfd103e86 1699 Pfam PF00089 Trypsin 33 253 1.5E-22 T 01-11-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 D3790_06430 0ef939eda092682c90f1185dfd103e86 1699 Gene3D G3DSA:2.60.40.10 1113 1191 6.6E-5 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_06430 0ef939eda092682c90f1185dfd103e86 1699 SUPERFAMILY SSF50494 8 250 3.71E-27 T 01-11-2018 IPR009003 Peptidase S1, PA clan D3790_06430 0ef939eda092682c90f1185dfd103e86 1699 Gene3D G3DSA:2.40.10.10 48 146 1.2E-24 T 01-11-2018 D3790_06430 0ef939eda092682c90f1185dfd103e86 1699 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 77 82 - T 01-11-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 D3790_06430 0ef939eda092682c90f1185dfd103e86 1699 SMART SM00020 32 263 2.7E-6 T 01-11-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 D3790_06430 0ef939eda092682c90f1185dfd103e86 1699 Gene3D G3DSA:2.40.10.10 33 248 1.2E-24 T 01-11-2018 D3790_06430 0ef939eda092682c90f1185dfd103e86 1699 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 67 82 3.2E-8 T 01-11-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 D3790_06430 0ef939eda092682c90f1185dfd103e86 1699 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 123 137 3.2E-8 T 01-11-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 D3790_06430 0ef939eda092682c90f1185dfd103e86 1699 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 222 234 3.2E-8 T 01-11-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 D3790_05955 36eef15222b8cd47494717bce8dd64f4 1461 SUPERFAMILY SSF49373 912 979 3.66E-8 T 01-11-2018 IPR008964 Invasin/intimin cell-adhesion fragments D3790_05955 36eef15222b8cd47494717bce8dd64f4 1461 SUPERFAMILY SSF49373 573 652 1.54E-5 T 01-11-2018 IPR008964 Invasin/intimin cell-adhesion fragments D3790_05955 36eef15222b8cd47494717bce8dd64f4 1461 PRINTS PR01369 Intimin signature 207 226 5.9E-7 T 01-11-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 D3790_05955 36eef15222b8cd47494717bce8dd64f4 1461 PRINTS PR01369 Intimin signature 275 294 5.9E-7 T 01-11-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 D3790_05955 36eef15222b8cd47494717bce8dd64f4 1461 PRINTS PR01369 Intimin signature 179 194 5.9E-7 T 01-11-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 D3790_05955 36eef15222b8cd47494717bce8dd64f4 1461 Gene3D G3DSA:2.60.40.10 886 991 4.9E-11 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_05955 36eef15222b8cd47494717bce8dd64f4 1461 Pfam PF11924 Inverse autotransporter, beta-domain 52 327 2.2E-106 T 01-11-2018 IPR024519 Inverse autotransporter, beta-domain D3790_05955 36eef15222b8cd47494717bce8dd64f4 1461 Gene3D G3DSA:2.40.160.160 89 334 7.5E-102 T 01-11-2018 IPR038177 Inverse autotransporter, beta-domain superfamily D3790_05955 36eef15222b8cd47494717bce8dd64f4 1461 Gene3D G3DSA:2.60.40.10 675 781 4.2E-7 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_05955 36eef15222b8cd47494717bce8dd64f4 1461 Gene3D G3DSA:2.60.40.10 564 668 3.5E-8 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_09530 c7e6f03fe1ea35d6fb9c9d4d038cb757 235 Gene3D G3DSA:2.60.40.10 151 231 1.8E-27 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_09530 c7e6f03fe1ea35d6fb9c9d4d038cb757 235 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 144 2.0E-42 T 01-11-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 D3790_09530 c7e6f03fe1ea35d6fb9c9d4d038cb757 235 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 102 119 - T 01-11-2018 IPR018046 Pili assembly chaperone, conserved site D3790_09530 c7e6f03fe1ea35d6fb9c9d4d038cb757 235 PRINTS PR00969 Pili chaperone signature 103 120 6.1E-37 T 01-11-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 D3790_09530 c7e6f03fe1ea35d6fb9c9d4d038cb757 235 PRINTS PR00969 Pili chaperone signature 75 96 6.1E-37 T 01-11-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 D3790_09530 c7e6f03fe1ea35d6fb9c9d4d038cb757 235 PRINTS PR00969 Pili chaperone signature 165 180 6.1E-37 T 01-11-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 D3790_09530 c7e6f03fe1ea35d6fb9c9d4d038cb757 235 PRINTS PR00969 Pili chaperone signature 25 34 6.1E-37 T 01-11-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 D3790_09530 c7e6f03fe1ea35d6fb9c9d4d038cb757 235 PRINTS PR00969 Pili chaperone signature 127 142 6.1E-37 T 01-11-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 D3790_09530 c7e6f03fe1ea35d6fb9c9d4d038cb757 235 Gene3D G3DSA:2.60.40.10 27 145 2.7E-42 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_09530 c7e6f03fe1ea35d6fb9c9d4d038cb757 235 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 170 226 1.2E-17 T 01-11-2018 IPR016148 Pili assembly chaperone, C-terminal D3790_09530 c7e6f03fe1ea35d6fb9c9d4d038cb757 235 SUPERFAMILY SSF49354 20 144 5.23E-40 T 01-11-2018 IPR008962 PapD-like superfamily D3790_09530 c7e6f03fe1ea35d6fb9c9d4d038cb757 235 SUPERFAMILY SSF49584 152 228 3.66E-25 T 01-11-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily D3790_18990 72b7f69b4e95895bc68f8e0dd2e96186 162 SUPERFAMILY SSF82679 1 102 8.76E-29 T 01-11-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D3790_18990 72b7f69b4e95895bc68f8e0dd2e96186 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 9.8E-56 T 01-11-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 D3790_18990 72b7f69b4e95895bc68f8e0dd2e96186 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 46.158 T 01-11-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 D3790_18990 72b7f69b4e95895bc68f8e0dd2e96186 162 SMART SM00738 1 100 1.0E-23 T 01-11-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D3790_18990 72b7f69b4e95895bc68f8e0dd2e96186 162 Gene3D G3DSA:3.30.70.940 1 162 4.9E-56 T 01-11-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D3790_18990 72b7f69b4e95895bc68f8e0dd2e96186 162 Pfam PF02357 Transcription termination factor nusG 3 96 3.6E-18 T 01-11-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D3790_10480 db8d5984f32777ebfab04e9cdf8f2cef 225 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 17 216 5.6E-46 T 01-11-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 D3790_10480 db8d5984f32777ebfab04e9cdf8f2cef 225 Pfam PF02361 Cobalt transport protein 11 221 3.0E-40 T 01-11-2018 IPR003339 ABC/ECF transporter, transmembrane component D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 SUPERFAMILY SSF56801 2150 2716 4.19E-158 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 SUPERFAMILY SSF52777 1916 2179 1.11E-64 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Gene3D G3DSA:3.40.50.1820 3851 4128 4.2E-47 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Pfam PF00550 Phosphopantetheine attachment site 1645 1704 3.7E-9 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Pfam PF00550 Phosphopantetheine attachment site 574 634 2.0E-8 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Pfam PF00550 Phosphopantetheine attachment site 2706 2765 3.0E-11 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Pfam PF00550 Phosphopantetheine attachment site 3786 3847 1.4E-8 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Gene3D G3DSA:1.10.1200.10 3776 3846 1.2E-20 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Pfam PF00501 AMP-binding enzyme 65 463 2.5E-96 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Pfam PF00501 AMP-binding enzyme 3272 3675 1.6E-95 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Pfam PF00501 AMP-binding enzyme 1141 1534 8.6E-103 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Pfam PF00501 AMP-binding enzyme 2192 2595 2.4E-96 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3418 3429 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Gene3D G3DSA:3.30.559.30 864 1116 6.5E-83 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 SUPERFAMILY SSF52777 2997 3259 1.22E-44 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 SUPERFAMILY SSF53474 3849 4122 3.35E-48 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 SUPERFAMILY SSF56801 1101 1655 8.11E-165 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 ProSitePatterns PS00012 Phosphopantetheine attachment site. 595 610 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Gene3D G3DSA:3.30.559.30 1911 2157 6.3E-150 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 SMART SM00823 Phosphopantetheine attachment site 1642 1710 0.039 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 SMART SM00823 Phosphopantetheine attachment site 571 639 0.08 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 SMART SM00823 Phosphopantetheine attachment site 2703 2771 0.0023 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Gene3D G3DSA:3.30.300.30 2589 2691 1.1E-35 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Gene3D G3DSA:3.30.300.30 458 558 3.2E-35 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Gene3D G3DSA:3.30.300.30 3669 3772 1.1E-35 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2338 2349 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Gene3D G3DSA:3.30.559.10 690 1050 6.5E-83 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 SUPERFAMILY SSF47336 1634 1706 1.21E-16 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 SUPERFAMILY SSF52777 866 1103 7.23E-41 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 SUPERFAMILY SSF52777 690 861 5.45E-31 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Gene3D G3DSA:3.40.50.12780 2182 2587 1.5E-138 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Gene3D G3DSA:3.40.50.12780 1130 1526 1.8E-140 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Gene3D G3DSA:3.40.50.12780 3262 3667 2.5E-137 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 SUPERFAMILY SSF52777 1731 1907 4.22E-50 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2727 2742 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Gene3D G3DSA:3.30.559.10 2822 3182 6.3E-82 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 ProSitePatterns PS00455 Putative AMP-binding domain signature. 206 217 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1282 1293 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 SUPERFAMILY SSF47336 2695 2768 4.61E-19 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Gene3D G3DSA:3.30.559.10 1730 2101 6.3E-150 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Gene3D G3DSA:1.10.1200.10 1630 1715 3.2E-22 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 SUPERFAMILY SSF47336 563 635 3.17E-15 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Pfam PF13193 AMP-binding enzyme C-terminal domain 3683 3756 2.3E-12 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Pfam PF13193 AMP-binding enzyme C-terminal domain 471 544 3.4E-12 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Pfam PF13193 AMP-binding enzyme C-terminal domain 1542 1615 1.7E-9 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Pfam PF13193 AMP-binding enzyme C-terminal domain 2603 2676 2.3E-12 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3807 3822 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 SUPERFAMILY SSF56801 27 584 1.57E-158 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Pfam PF00975 Thioesterase domain 3886 4126 2.7E-21 T 01-11-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3293 3699 7.1E-132 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 86 487 6.7E-132 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1161 1556 2.8E-136 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2213 2619 1.2E-132 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Gene3D G3DSA:3.30.559.30 2996 3248 6.3E-82 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 SUPERFAMILY SSF52777 2815 3010 1.03E-30 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Gene3D G3DSA:3.40.50.12780 52 457 1.1E-137 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 SUPERFAMILY SSF56801 3231 3796 1.7E-157 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Pfam PF00668 Condensation domain 2817 3251 1.2E-42 T 01-11-2018 IPR001242 Condensation domain D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Pfam PF00668 Condensation domain 685 1119 6.9E-43 T 01-11-2018 IPR001242 Condensation domain D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Pfam PF00668 Condensation domain 1727 2171 2.0E-105 T 01-11-2018 IPR001242 Condensation domain D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 SUPERFAMILY SSF47336 3775 3847 2.3E-15 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Gene3D G3DSA:3.30.300.30 1528 1629 1.8E-31 T 01-11-2018 D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Gene3D G3DSA:1.10.1200.10 559 641 1.1E-21 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07945 5500de8d108a7dc4d2d749555cb2a372 4138 Gene3D G3DSA:1.10.1200.10 2692 2773 3.1E-25 T 01-11-2018 IPR036736 ACP-like superfamily D3790_02740 fd7d77db9e60d575e3f34a93a276bc7e 296 SUPERFAMILY SSF51197 12 269 8.24E-55 T 01-11-2018 D3790_02740 fd7d77db9e60d575e3f34a93a276bc7e 296 Gene3D G3DSA:3.60.130.10 2 282 6.7E-90 T 01-11-2018 D3790_02740 fd7d77db9e60d575e3f34a93a276bc7e 296 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 28 267 3.5E-40 T 01-11-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 D3790_15660 aadce89fd3b94fe727cda2c51bf3f6ec 313 TIGRFAM TIGR02277 PaaX_trns_reg: phenylacetic acid degradation operon negative regulatory protein PaaX 22 304 6.0E-99 T 01-11-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 D3790_15660 aadce89fd3b94fe727cda2c51bf3f6ec 313 PIRSF PIRSF020623 1 307 4.7E-110 T 01-11-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 D3790_15660 aadce89fd3b94fe727cda2c51bf3f6ec 313 Gene3D G3DSA:3.30.70.2670 102 188 2.3E-26 T 01-11-2018 D3790_15660 aadce89fd3b94fe727cda2c51bf3f6ec 313 Gene3D G3DSA:1.10.10.10 22 101 2.3E-26 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_15660 aadce89fd3b94fe727cda2c51bf3f6ec 313 Pfam PF07848 PaaX-like protein 20 88 1.6E-25 T 01-11-2018 IPR012906 PaaX-like, N-terminal D3790_15660 aadce89fd3b94fe727cda2c51bf3f6ec 313 SUPERFAMILY SSF46785 51 98 4.8E-5 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_15660 aadce89fd3b94fe727cda2c51bf3f6ec 313 Pfam PF08223 PaaX-like protein C-terminal domain 184 282 2.6E-29 T 01-11-2018 IPR013225 PaaX-like, C-terminal D3790_15660 aadce89fd3b94fe727cda2c51bf3f6ec 313 Gene3D G3DSA:1.20.58.1460 189 269 2.3E-26 T 01-11-2018 D3790_10130 3e10ff6e8841c4d079590046ca41a0f2 110 SUPERFAMILY SSF46785 3 93 1.29E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_10130 3e10ff6e8841c4d079590046ca41a0f2 110 Pfam PF12840 Helix-turn-helix domain 13 69 6.3E-11 T 01-11-2018 D3790_10130 3e10ff6e8841c4d079590046ca41a0f2 110 SMART SM00418 8 89 2.0E-6 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D3790_10130 3e10ff6e8841c4d079590046ca41a0f2 110 Gene3D G3DSA:1.10.10.10 1 93 6.8E-19 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_19250 73f9eca1d0a9ca71f265b3cb60f033a1 189 Gene3D G3DSA:3.90.70.10 8 155 1.3E-39 T 01-11-2018 D3790_19250 73f9eca1d0a9ca71f265b3cb60f033a1 189 Pfam PF03412 Peptidase C39 family 19 146 1.4E-35 T 01-11-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 D3790_01060 cbccc205c9533782e3eae9e2c7b17342 431 SUPERFAMILY SSF50621 252 429 3.77E-52 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D3790_01060 cbccc205c9533782e3eae9e2c7b17342 431 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 218 231 - T 01-11-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site D3790_01060 cbccc205c9533782e3eae9e2c7b17342 431 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 17 429 4.0E-123 T 01-11-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D3790_01060 cbccc205c9533782e3eae9e2c7b17342 431 SUPERFAMILY SSF51419 27 279 1.15E-55 T 01-11-2018 IPR029066 PLP-binding barrel D3790_01060 cbccc205c9533782e3eae9e2c7b17342 431 Gene3D G3DSA:2.40.37.10 24 426 9.1E-137 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D3790_01060 cbccc205c9533782e3eae9e2c7b17342 431 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 430 37.572 T 01-11-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D3790_01060 cbccc205c9533782e3eae9e2c7b17342 431 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 46 277 1.9E-55 T 01-11-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 D3790_01060 cbccc205c9533782e3eae9e2c7b17342 431 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 53 71 - T 01-11-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site D3790_01060 cbccc205c9533782e3eae9e2c7b17342 431 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 184 197 4.0E-19 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D3790_01060 cbccc205c9533782e3eae9e2c7b17342 431 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 267 286 4.0E-19 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D3790_01060 cbccc205c9533782e3eae9e2c7b17342 431 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 53 71 4.0E-19 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D3790_01060 cbccc205c9533782e3eae9e2c7b17342 431 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 73 85 4.0E-19 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D3790_01060 cbccc205c9533782e3eae9e2c7b17342 431 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 387 400 4.0E-19 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D3790_01060 cbccc205c9533782e3eae9e2c7b17342 431 PRINTS PR01181 Diaminopimelate decarboxylase signature 71 88 9.4E-16 T 01-11-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D3790_01060 cbccc205c9533782e3eae9e2c7b17342 431 PRINTS PR01181 Diaminopimelate decarboxylase signature 295 313 9.4E-16 T 01-11-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D3790_01060 cbccc205c9533782e3eae9e2c7b17342 431 PRINTS PR01181 Diaminopimelate decarboxylase signature 159 168 9.4E-16 T 01-11-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D3790_01060 cbccc205c9533782e3eae9e2c7b17342 431 Gene3D G3DSA:3.20.20.10 35 281 9.1E-137 T 01-11-2018 IPR029066 PLP-binding barrel D3790_01060 cbccc205c9533782e3eae9e2c7b17342 431 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 278 387 9.3E-23 T 01-11-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 D3790_17635 e67c7ca97f880f4b2afd7efe5a1434b0 1485 Gene3D G3DSA:3.60.20.10 12 544 0.0 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D3790_17635 e67c7ca97f880f4b2afd7efe5a1434b0 1485 Pfam PF00310 Glutamine amidotransferases class-II 12 424 1.0E-174 T 01-11-2018 IPR017932 Glutamine amidotransferase type 2 domain D3790_17635 e67c7ca97f880f4b2afd7efe5a1434b0 1485 Pfam PF01645 Conserved region in glutamate synthase 792 1155 3.1E-157 T 01-11-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 D3790_17635 e67c7ca97f880f4b2afd7efe5a1434b0 1485 Pfam PF01493 GXGXG motif 1235 1417 9.6E-77 T 01-11-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 D3790_17635 e67c7ca97f880f4b2afd7efe5a1434b0 1485 SUPERFAMILY SSF69336 1211 1463 6.41E-90 T 01-11-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 D3790_17635 e67c7ca97f880f4b2afd7efe5a1434b0 1485 Gene3D G3DSA:2.160.20.60 1193 1467 1.4E-101 T 01-11-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 D3790_17635 e67c7ca97f880f4b2afd7efe5a1434b0 1485 SUPERFAMILY SSF56235 12 428 4.98E-149 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D3790_17635 e67c7ca97f880f4b2afd7efe5a1434b0 1485 SUPERFAMILY SSF51395 433 1190 1.47E-252 T 01-11-2018 D3790_17635 e67c7ca97f880f4b2afd7efe5a1434b0 1485 Gene3D G3DSA:3.20.20.70 482 1170 0.0 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_17635 e67c7ca97f880f4b2afd7efe5a1434b0 1485 Gene3D G3DSA:3.20.20.70 429 791 0.0 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_17635 e67c7ca97f880f4b2afd7efe5a1434b0 1485 Pfam PF04898 Glutamate synthase central domain 457 736 1.8E-103 T 01-11-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 Gene3D G3DSA:2.40.50.180 588 652 2.6E-36 T 01-11-2018 D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 Gene3D G3DSA:1.10.287.560 317 380 4.0E-18 T 01-11-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 Pfam PF01627 Hpt domain 7 102 1.3E-19 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 Gene3D G3DSA:2.30.30.40 565 693 2.6E-36 T 01-11-2018 D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 SMART SM00260 557 697 8.2E-38 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 SUPERFAMILY SSF47384 318 381 1.57E-15 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 Gene3D G3DSA:1.20.120.160 1 142 5.1E-44 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 SMART SM00073 3 100 5.3E-30 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 317 380 6.9E-19 T 01-11-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 Pfam PF09078 CheY binding 180 242 1.6E-23 T 01-11-2018 IPR015162 CheY binding D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 Gene3D G3DSA:3.30.565.10 381 564 2.9E-54 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 Pfam PF01584 CheW-like domain 570 696 4.5E-24 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 Gene3D G3DSA:3.30.70.400 165 243 4.5E-24 T 01-11-2018 IPR035891 CheY-binding domain of CheA D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 SMART SM00387 425 565 1.0E-24 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 SUPERFAMILY SSF47226 5 124 1.96E-32 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 SUPERFAMILY SSF50341 564 696 2.62E-29 T 01-11-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 SUPERFAMILY SSF55052 179 242 6.8E-19 T 01-11-2018 IPR035891 CheY-binding domain of CheA D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 562 9.3E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 519 9.3E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 484 9.3E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 543 9.3E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 SUPERFAMILY SSF55874 383 563 4.06E-34 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 428 564 1.0E-15 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_08865 ace7cf49a9931ab4732e5c75e53a3101 715 SMART SM01231 317 380 2.3E-22 T 01-11-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 D3790_15885 73dc88810f1aa265e9e629182f119bb0 249 SUPERFAMILY SSF51735 1 248 9.65E-73 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_15885 73dc88810f1aa265e9e629182f119bb0 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D3790_15885 73dc88810f1aa265e9e629182f119bb0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 6.4E-38 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_15885 73dc88810f1aa265e9e629182f119bb0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 6.4E-38 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_15885 73dc88810f1aa265e9e629182f119bb0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 6.4E-38 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_15885 73dc88810f1aa265e9e629182f119bb0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 6.4E-38 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_15885 73dc88810f1aa265e9e629182f119bb0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 6.4E-38 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_15885 73dc88810f1aa265e9e629182f119bb0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 6.4E-38 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_15885 73dc88810f1aa265e9e629182f119bb0 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.7E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_15885 73dc88810f1aa265e9e629182f119bb0 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.7E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_15885 73dc88810f1aa265e9e629182f119bb0 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.7E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_15885 73dc88810f1aa265e9e629182f119bb0 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 248 6.4E-54 T 01-11-2018 D3790_15885 73dc88810f1aa265e9e629182f119bb0 249 Gene3D G3DSA:3.40.50.720 1 248 8.0E-77 T 01-11-2018 D3790_15380 45789d775c3192c2bb5bc80426ee7000 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.7E-23 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D3790_15380 45789d775c3192c2bb5bc80426ee7000 332 Gene3D G3DSA:3.40.50.2300 69 321 5.5E-77 T 01-11-2018 D3790_15380 45789d775c3192c2bb5bc80426ee7000 332 SUPERFAMILY SSF53822 60 330 2.72E-84 T 01-11-2018 IPR028082 Periplasmic binding protein-like I D3790_15380 45789d775c3192c2bb5bc80426ee7000 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 01-11-2018 D3790_15380 45789d775c3192c2bb5bc80426ee7000 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.3E-6 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D3790_15380 45789d775c3192c2bb5bc80426ee7000 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.3E-6 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D3790_15380 45789d775c3192c2bb5bc80426ee7000 332 SUPERFAMILY SSF47413 2 59 1.1E-18 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_15380 45789d775c3192c2bb5bc80426ee7000 332 Gene3D G3DSA:1.10.260.40 3 59 1.9E-25 T 01-11-2018 D3790_15380 45789d775c3192c2bb5bc80426ee7000 332 Gene3D G3DSA:3.40.50.2300 160 289 5.5E-77 T 01-11-2018 D3790_15380 45789d775c3192c2bb5bc80426ee7000 332 SMART SM00354 1 71 5.9E-39 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D3790_15380 45789d775c3192c2bb5bc80426ee7000 332 Pfam PF13377 Periplasmic binding protein-like domain 169 329 1.3E-40 T 01-11-2018 D3790_02445 596aeb8a6a7370917fed5cfd9cad167e 426 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 7 413 3.9E-156 T 01-11-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 D3790_02445 596aeb8a6a7370917fed5cfd9cad167e 426 Pfam PF13393 Histidyl-tRNA synthetase 10 312 9.6E-44 T 01-11-2018 D3790_02445 596aeb8a6a7370917fed5cfd9cad167e 426 Pfam PF03129 Anticodon binding domain 348 423 2.3E-7 T 01-11-2018 IPR004154 Anticodon-binding D3790_02445 596aeb8a6a7370917fed5cfd9cad167e 426 SUPERFAMILY SSF52954 332 425 3.93E-20 T 01-11-2018 D3790_02445 596aeb8a6a7370917fed5cfd9cad167e 426 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 423 33.214 T 01-11-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 D3790_02445 596aeb8a6a7370917fed5cfd9cad167e 426 Gene3D G3DSA:3.40.50.800 329 425 4.4E-22 T 01-11-2018 IPR036621 Anticodon-binding domain superfamily D3790_02445 596aeb8a6a7370917fed5cfd9cad167e 426 Gene3D G3DSA:3.30.930.10 3 323 9.4E-119 T 01-11-2018 D3790_02445 596aeb8a6a7370917fed5cfd9cad167e 426 PIRSF PIRSF001549 2 425 4.5E-124 T 01-11-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 D3790_02445 596aeb8a6a7370917fed5cfd9cad167e 426 SUPERFAMILY SSF55681 5 321 3.25E-105 T 01-11-2018 D3790_04940 63001258550989ff4db4f0c846f113af 3592 Pfam PF00501 AMP-binding enzyme 1611 2024 2.0E-107 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_04940 63001258550989ff4db4f0c846f113af 3592 Pfam PF00501 AMP-binding enzyme 512 925 3.7E-105 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_04940 63001258550989ff4db4f0c846f113af 3592 Pfam PF00501 AMP-binding enzyme 2713 3126 2.5E-109 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_04940 63001258550989ff4db4f0c846f113af 3592 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1059 1074 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_04940 63001258550989ff4db4f0c846f113af 3592 Gene3D G3DSA:1.10.1200.10 2121 2207 2.6E-24 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04940 63001258550989ff4db4f0c846f113af 3592 Pfam PF00550 Phosphopantetheine attachment site 3239 3301 1.4E-11 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_04940 63001258550989ff4db4f0c846f113af 3592 Pfam PF00550 Phosphopantetheine attachment site 1036 1099 2.5E-11 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_04940 63001258550989ff4db4f0c846f113af 3592 Pfam PF00550 Phosphopantetheine attachment site 2135 2198 3.3E-12 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_04940 63001258550989ff4db4f0c846f113af 3592 Pfam PF13193 AMP-binding enzyme C-terminal domain 3134 3209 2.5E-9 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_04940 63001258550989ff4db4f0c846f113af 3592 Pfam PF13193 AMP-binding enzyme C-terminal domain 933 1008 9.7E-10 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_04940 63001258550989ff4db4f0c846f113af 3592 Pfam PF13193 AMP-binding enzyme C-terminal domain 2032 2107 4.8E-12 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_04940 63001258550989ff4db4f0c846f113af 3592 ProSitePatterns PS00455 Putative AMP-binding domain signature. 659 670 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_04940 63001258550989ff4db4f0c846f113af 3592 Gene3D G3DSA:1.10.1200.10 1024 1106 3.1E-24 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04940 63001258550989ff4db4f0c846f113af 3592 Gene3D G3DSA:1.10.1200.10 3225 3306 2.5E-22 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04940 63001258550989ff4db4f0c846f113af 3592 Gene3D G3DSA:3.30.559.10 46 421 5.6E-156 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_04940 63001258550989ff4db4f0c846f113af 3592 Gene3D G3DSA:3.30.559.10 2259 2623 4.1E-87 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_04940 63001258550989ff4db4f0c846f113af 3592 SUPERFAMILY SSF52777 234 494 3.34E-65 T 01-11-2018 D3790_04940 63001258550989ff4db4f0c846f113af 3592 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1758 1769 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_04940 63001258550989ff4db4f0c846f113af 3592 SUPERFAMILY SSF53474 3304 3585 1.0E-45 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_04940 63001258550989ff4db4f0c846f113af 3592 SUPERFAMILY SSF52777 2434 2698 9.45E-45 T 01-11-2018 D3790_04940 63001258550989ff4db4f0c846f113af 3592 SUPERFAMILY SSF52777 1152 1346 3.11E-31 T 01-11-2018 D3790_04940 63001258550989ff4db4f0c846f113af 3592 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 533 949 1.4E-139 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_04940 63001258550989ff4db4f0c846f113af 3592 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1632 2048 1.8E-144 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_04940 63001258550989ff4db4f0c846f113af 3592 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2734 3150 3.6E-142 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_04940 63001258550989ff4db4f0c846f113af 3592 Gene3D G3DSA:3.30.559.10 1150 1338 6.0E-36 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_04940 63001258550989ff4db4f0c846f113af 3592 Gene3D G3DSA:3.30.559.30 2431 2688 4.1E-87 T 01-11-2018 D3790_04940 63001258550989ff4db4f0c846f113af 3592 Gene3D G3DSA:3.30.559.30 230 477 5.6E-156 T 01-11-2018 D3790_04940 63001258550989ff4db4f0c846f113af 3592 SUPERFAMILY SSF47336 1027 1100 1.7E-18 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04940 63001258550989ff4db4f0c846f113af 3592 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3260 3275 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_04940 63001258550989ff4db4f0c846f113af 3592 SUPERFAMILY SSF52777 2251 2445 4.11E-31 T 01-11-2018 D3790_04940 63001258550989ff4db4f0c846f113af 3592 Pfam PF00668 Condensation domain 42 492 1.5E-107 T 01-11-2018 IPR001242 Condensation domain D3790_04940 63001258550989ff4db4f0c846f113af 3592 Pfam PF00668 Condensation domain 1154 1591 1.3E-52 T 01-11-2018 IPR001242 Condensation domain D3790_04940 63001258550989ff4db4f0c846f113af 3592 Pfam PF00668 Condensation domain 2252 2688 3.4E-55 T 01-11-2018 IPR001242 Condensation domain D3790_04940 63001258550989ff4db4f0c846f113af 3592 Gene3D G3DSA:3.40.50.12780 1600 2016 5.4E-147 T 01-11-2018 D3790_04940 63001258550989ff4db4f0c846f113af 3592 Gene3D G3DSA:3.40.50.12780 2702 3118 1.5E-146 T 01-11-2018 D3790_04940 63001258550989ff4db4f0c846f113af 3592 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2860 2871 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_04940 63001258550989ff4db4f0c846f113af 3592 Pfam PF00975 Thioesterase domain 3329 3571 1.5E-20 T 01-11-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 D3790_04940 63001258550989ff4db4f0c846f113af 3592 Gene3D G3DSA:3.40.50.1820 3308 3585 4.8E-48 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_04940 63001258550989ff4db4f0c846f113af 3592 SUPERFAMILY SSF56801 1571 2147 7.85E-169 T 01-11-2018 D3790_04940 63001258550989ff4db4f0c846f113af 3592 Gene3D G3DSA:3.40.50.12780 506 917 1.4E-139 T 01-11-2018 D3790_04940 63001258550989ff4db4f0c846f113af 3592 Gene3D G3DSA:3.30.559.30 1339 1598 7.4E-46 T 01-11-2018 D3790_04940 63001258550989ff4db4f0c846f113af 3592 SUPERFAMILY SSF47336 2127 2199 2.88E-18 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04940 63001258550989ff4db4f0c846f113af 3592 SUPERFAMILY SSF52777 1333 1598 1.06E-43 T 01-11-2018 D3790_04940 63001258550989ff4db4f0c846f113af 3592 SUPERFAMILY SSF56801 2673 3249 1.96E-165 T 01-11-2018 D3790_04940 63001258550989ff4db4f0c846f113af 3592 SUPERFAMILY SSF56801 471 1048 1.44E-163 T 01-11-2018 D3790_04940 63001258550989ff4db4f0c846f113af 3592 SUPERFAMILY SSF47336 3228 3301 1.96E-18 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04940 63001258550989ff4db4f0c846f113af 3592 SMART SM00823 Phosphopantetheine attachment site 3236 3305 0.0041 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_04940 63001258550989ff4db4f0c846f113af 3592 SMART SM00823 Phosphopantetheine attachment site 2134 2202 1.6E-4 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_04940 63001258550989ff4db4f0c846f113af 3592 SMART SM00823 Phosphopantetheine attachment site 1035 1103 0.0017 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_04940 63001258550989ff4db4f0c846f113af 3592 SUPERFAMILY SSF52777 47 226 1.67E-48 T 01-11-2018 D3790_04940 63001258550989ff4db4f0c846f113af 3592 Gene3D G3DSA:3.30.300.30 919 1023 1.4E-34 T 01-11-2018 D3790_04940 63001258550989ff4db4f0c846f113af 3592 Gene3D G3DSA:3.30.300.30 2018 2120 3.4E-36 T 01-11-2018 D3790_04940 63001258550989ff4db4f0c846f113af 3592 Gene3D G3DSA:3.30.300.30 3120 3224 9.8E-34 T 01-11-2018 D3790_05630 27f4d8dce51dc464faa73a54d6225b5e 120 Pfam PF04024 PspC domain 7 65 2.3E-16 T 01-11-2018 IPR007168 Phage shock protein, PspC, N-terminal D3790_05630 27f4d8dce51dc464faa73a54d6225b5e 120 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 7 120 1.3E-38 T 01-11-2018 IPR014320 Phage shock protein, PspC D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 Gene3D G3DSA:3.10.20.690 592 683 2.4E-36 T 01-11-2018 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 Pfam PF00204 DNA gyrase B 221 390 8.0E-59 T 01-11-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 3.2E-71 T 01-11-2018 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 3.2E-71 T 01-11-2018 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 3.2E-71 T 01-11-2018 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 3.2E-71 T 01-11-2018 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 3.2E-71 T 01-11-2018 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 3.2E-71 T 01-11-2018 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 3.2E-71 T 01-11-2018 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 3.2E-71 T 01-11-2018 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 3.2E-71 T 01-11-2018 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 2.5E-77 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 2.5E-77 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 2.5E-77 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 2.5E-77 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 2.5E-77 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 2.5E-77 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 2.5E-77 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 2.5E-77 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 2.5E-77 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 2.5E-77 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 01-11-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 SUPERFAMILY SSF56719 394 795 3.14E-87 T 01-11-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 SUPERFAMILY SSF55874 4 219 5.37E-77 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 732 793 9.0E-30 T 01-11-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 SMART SM00387 31 175 8.3E-32 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 Gene3D G3DSA:3.30.230.10 221 392 3.4E-75 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 Gene3D G3DSA:3.30.565.10 1 220 1.9E-96 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 SUPERFAMILY SSF54211 221 392 1.29E-61 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 Gene3D G3DSA:3.40.50.670 398 586 3.0E-74 T 01-11-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 SMART SM00433 35 797 6.0E-283 T 01-11-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 Gene3D G3DSA:3.40.50.670 705 803 1.3E-26 T 01-11-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 01-11-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 1.7E-22 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 Pfam PF01751 Toprim domain 419 531 8.9E-18 T 01-11-2018 IPR006171 TOPRIM domain D3790_15560 10e32e53d67bb21293539d2bacb6d2ed 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 108.038 T 01-11-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_12965 628479029200590a0b7755a6219a487f 222 Gene3D G3DSA:3.40.50.1000 5 214 7.1E-60 T 01-11-2018 IPR023214 HAD superfamily D3790_12965 628479029200590a0b7755a6219a487f 222 SUPERFAMILY SSF56784 2 214 5.97E-29 T 01-11-2018 IPR036412 HAD-like superfamily D3790_12965 628479029200590a0b7755a6219a487f 222 Gene3D G3DSA:1.20.1440.100 17 90 7.1E-60 T 01-11-2018 D3790_12965 628479029200590a0b7755a6219a487f 222 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 203 1.6E-45 T 01-11-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like D3790_12965 628479029200590a0b7755a6219a487f 222 Pfam PF12710 haloacid dehalogenase-like hydrolase 6 188 2.6E-30 T 01-11-2018 D3790_12965 628479029200590a0b7755a6219a487f 222 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 190 2.3E-25 T 01-11-2018 D3790_11070 8bcc194e6a470fbf97206eca8b7af5f2 456 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 01-11-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 D3790_11070 8bcc194e6a470fbf97206eca8b7af5f2 456 Gene3D G3DSA:3.40.50.1100 9 309 6.6E-110 T 01-11-2018 D3790_11070 8bcc194e6a470fbf97206eca8b7af5f2 456 Gene3D G3DSA:3.10.580.10 335 456 2.6E-21 T 01-11-2018 D3790_11070 8bcc194e6a470fbf97206eca8b7af5f2 456 Pfam PF00571 CBS domain 344 388 2.4E-5 T 01-11-2018 IPR000644 CBS domain D3790_11070 8bcc194e6a470fbf97206eca8b7af5f2 456 Pfam PF00571 CBS domain 399 450 1.0E-7 T 01-11-2018 IPR000644 CBS domain D3790_11070 8bcc194e6a470fbf97206eca8b7af5f2 456 SMART SM00116 406 452 4.8 T 01-11-2018 IPR000644 CBS domain D3790_11070 8bcc194e6a470fbf97206eca8b7af5f2 456 SMART SM00116 342 389 0.0048 T 01-11-2018 IPR000644 CBS domain D3790_11070 8bcc194e6a470fbf97206eca8b7af5f2 456 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 301 1.6E-64 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D3790_11070 8bcc194e6a470fbf97206eca8b7af5f2 456 SUPERFAMILY SSF54631 343 453 2.91E-21 T 01-11-2018 D3790_11070 8bcc194e6a470fbf97206eca8b7af5f2 456 SUPERFAMILY SSF53686 5 320 1.19E-93 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D3790_11070 8bcc194e6a470fbf97206eca8b7af5f2 456 Gene3D G3DSA:3.40.50.1100 40 153 6.6E-110 T 01-11-2018 D3790_01660 abe869f6a7e1d0d746f6305403c059e6 170 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 170 2.4E-55 T 01-11-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D3790_01660 abe869f6a7e1d0d746f6305403c059e6 170 Gene3D G3DSA:2.40.50.140 2 149 7.7E-50 T 01-11-2018 D3790_01660 abe869f6a7e1d0d746f6305403c059e6 170 PIRSF PIRSF002070 2 162 9.6E-41 T 01-11-2018 D3790_01660 abe869f6a7e1d0d746f6305403c059e6 170 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 38.446 T 01-11-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D3790_01660 abe869f6a7e1d0d746f6305403c059e6 170 SUPERFAMILY SSF50249 4 170 1.85E-54 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_01660 abe869f6a7e1d0d746f6305403c059e6 170 Pfam PF00436 Single-strand binding protein family 6 112 1.8E-41 T 01-11-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 D3790_18705 76d28bdf608f2357fe42d4d57743b58f 457 Pfam PF00696 Amino acid kinase family 11 284 3.4E-49 T 01-11-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D3790_18705 76d28bdf608f2357fe42d4d57743b58f 457 SUPERFAMILY SSF55021 303 401 3.08E-17 T 01-11-2018 D3790_18705 76d28bdf608f2357fe42d4d57743b58f 457 ProSitePatterns PS00324 Aspartokinase signature. 13 21 - T 01-11-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D3790_18705 76d28bdf608f2357fe42d4d57743b58f 457 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 11 456 5.4E-135 T 01-11-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D3790_18705 76d28bdf608f2357fe42d4d57743b58f 457 Gene3D G3DSA:1.20.120.1320 49 141 3.3E-100 T 01-11-2018 D3790_18705 76d28bdf608f2357fe42d4d57743b58f 457 Gene3D G3DSA:3.30.70.260 316 390 1.1E-47 T 01-11-2018 D3790_18705 76d28bdf608f2357fe42d4d57743b58f 457 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 10 455 5.5E-128 T 01-11-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D3790_18705 76d28bdf608f2357fe42d4d57743b58f 457 PIRSF PIRSF000726 9 457 1.5E-142 T 01-11-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D3790_18705 76d28bdf608f2357fe42d4d57743b58f 457 SUPERFAMILY SSF53633 11 298 5.76E-73 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily D3790_18705 76d28bdf608f2357fe42d4d57743b58f 457 SUPERFAMILY SSF55021 383 456 1.32E-13 T 01-11-2018 D3790_18705 76d28bdf608f2357fe42d4d57743b58f 457 Gene3D G3DSA:3.30.70.260 310 452 1.1E-47 T 01-11-2018 D3790_18705 76d28bdf608f2357fe42d4d57743b58f 457 Gene3D G3DSA:3.40.1160.10 13 296 3.3E-100 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 Gene3D G3DSA:3.30.70.3380 368 478 1.3E-39 T 01-11-2018 D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 174 7.1E-17 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 Gene3D G3DSA:3.40.50.300 1 185 5.3E-70 T 01-11-2018 D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 Gene3D G3DSA:3.30.70.2570 479 553 1.3E-33 T 01-11-2018 IPR038363 LepA, C-terminal domain superfamily D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 SUPERFAMILY SSF54980 399 493 2.88E-24 T 01-11-2018 IPR035647 EF-G domain III/V-like D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.432 T 01-11-2018 IPR006297 Elongation factor 4 GO:0005525 D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 Pfam PF00679 Elongation factor G C-terminus 399 482 2.7E-19 T 01-11-2018 IPR000640 Elongation factor EFG, domain V-like D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 Pfam PF03144 Elongation factor Tu domain 2 205 275 8.2E-11 T 01-11-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 SUPERFAMILY SSF54980 292 370 2.45E-18 T 01-11-2018 IPR035647 EF-G domain III/V-like D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 Gene3D G3DSA:3.30.70.870 286 367 3.7E-35 T 01-11-2018 D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 SUPERFAMILY SSF52540 2 235 4.52E-56 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 Gene3D G3DSA:2.40.30.10 186 285 2.4E-34 T 01-11-2018 D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.6E-49 T 01-11-2018 IPR013842 GTP-binding protein LepA, C-terminal D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 3.2E-52 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_02230 4ad63a5017a10ca849ee15379c88bc82 598 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 2.2E-301 T 01-11-2018 IPR006297 Elongation factor 4 GO:0005525 D3790_18295 ff7791386bb297d41f238c9e307a5ca7 110 Pfam PF02974 Protease inhibitor Inh 8 99 3.2E-19 T 01-11-2018 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 D3790_18295 ff7791386bb297d41f238c9e307a5ca7 110 Gene3D G3DSA:2.40.128.10 3 102 8.6E-29 T 01-11-2018 D3790_18295 ff7791386bb297d41f238c9e307a5ca7 110 PRINTS PR01274 Metalloprotease inhibitor signature 64 77 7.4E-7 T 01-11-2018 IPR022815 Protease inhibitor I38 D3790_18295 ff7791386bb297d41f238c9e307a5ca7 110 PRINTS PR01274 Metalloprotease inhibitor signature 3 19 7.4E-7 T 01-11-2018 IPR022815 Protease inhibitor I38 D3790_18295 ff7791386bb297d41f238c9e307a5ca7 110 ProDom PD015804 INHIBITOR PROTEASE METALLOPROTEASE PROTEINASE PRECURSOR SIGNAL PERIPLASMIC METALLOENZYME ALKALINE PRTA-SPECIFIC 12 98 5.0E-45 T 01-11-2018 IPR003086 Metalloprotease inhibitor I38 GO:0004866|GO:0030288 D3790_18295 ff7791386bb297d41f238c9e307a5ca7 110 SUPERFAMILY SSF50882 3 99 3.66E-25 T 01-11-2018 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 D3790_13020 fb13a7f4ab981e4303874af35e1ad821 198 SUPERFAMILY SSF48295 90 139 2.67E-8 T 01-11-2018 IPR010921 Trp repressor/replication initiator GO:0043565 D3790_13020 fb13a7f4ab981e4303874af35e1ad821 198 Pfam PF01527 Transposase 92 141 4.4E-12 T 01-11-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D3790_17130 cddf6fb663c7a5a42a628835690a84f4 399 Pfam PF13416 Bacterial extracellular solute-binding protein 53 337 5.8E-39 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein D3790_17130 cddf6fb663c7a5a42a628835690a84f4 399 PRINTS PR00181 Maltose binding protein signature 302 323 3.2E-83 T 01-11-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 D3790_17130 cddf6fb663c7a5a42a628835690a84f4 399 PRINTS PR00181 Maltose binding protein signature 73 91 3.2E-83 T 01-11-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 D3790_17130 cddf6fb663c7a5a42a628835690a84f4 399 PRINTS PR00181 Maltose binding protein signature 360 379 3.2E-83 T 01-11-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 D3790_17130 cddf6fb663c7a5a42a628835690a84f4 399 PRINTS PR00181 Maltose binding protein signature 236 255 3.2E-83 T 01-11-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 D3790_17130 cddf6fb663c7a5a42a628835690a84f4 399 PRINTS PR00181 Maltose binding protein signature 39 57 3.2E-83 T 01-11-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 D3790_17130 cddf6fb663c7a5a42a628835690a84f4 399 PRINTS PR00181 Maltose binding protein signature 154 173 3.2E-83 T 01-11-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 D3790_17130 cddf6fb663c7a5a42a628835690a84f4 399 PRINTS PR00181 Maltose binding protein signature 174 193 3.2E-83 T 01-11-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 D3790_17130 cddf6fb663c7a5a42a628835690a84f4 399 PRINTS PR00181 Maltose binding protein signature 133 152 3.2E-83 T 01-11-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 D3790_17130 cddf6fb663c7a5a42a628835690a84f4 399 Gene3D G3DSA:3.40.190.10 52 360 1.6E-141 T 01-11-2018 D3790_17130 cddf6fb663c7a5a42a628835690a84f4 399 SUPERFAMILY SSF53850 32 397 3.48E-90 T 01-11-2018 D3790_17130 cddf6fb663c7a5a42a628835690a84f4 399 Gene3D G3DSA:3.40.190.10 141 391 1.6E-141 T 01-11-2018 D3790_00615 ea4ce0444e3eb342f162300c619d4dff 294 Gene3D G3DSA:3.60.130.10 3 294 7.9E-29 T 01-11-2018 D3790_00615 ea4ce0444e3eb342f162300c619d4dff 294 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 62 167 8.7E-7 T 01-11-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 D3790_00615 ea4ce0444e3eb342f162300c619d4dff 294 SUPERFAMILY SSF51197 48 293 3.75E-26 T 01-11-2018 D3790_07555 de0a2d05e9072d434cfc93982cad63c4 121 Pfam PF07828 PA-IL-like protein 3 113 4.6E-29 T 01-11-2018 IPR012905 PA-IL-like D3790_07555 de0a2d05e9072d434cfc93982cad63c4 121 SUPERFAMILY SSF49785 3 113 6.55E-27 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily D3790_07555 de0a2d05e9072d434cfc93982cad63c4 121 Gene3D G3DSA:2.60.120.430 3 112 3.9E-28 T 01-11-2018 D3790_16990 7184b6b3e6eacf6901f4a293b7eacccc 294 PIRSF PIRSF038992 31 289 6.9E-80 T 01-11-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 D3790_16990 7184b6b3e6eacf6901f4a293b7eacccc 294 SUPERFAMILY SSF51569 35 275 1.06E-63 T 01-11-2018 D3790_16990 7184b6b3e6eacf6901f4a293b7eacccc 294 Gene3D G3DSA:3.20.20.70 1 291 3.9E-100 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_16990 7184b6b3e6eacf6901f4a293b7eacccc 294 Pfam PF01791 DeoC/LacD family aldolase 52 258 7.3E-18 T 01-11-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 D3790_16990 7184b6b3e6eacf6901f4a293b7eacccc 294 SMART SM01133 51 259 8.4E-29 T 01-11-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 D3790_16990 7184b6b3e6eacf6901f4a293b7eacccc 294 Hamap MF_02052 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [lsrF]. 1 291 75.718 T 01-11-2018 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase GO:0016747 D3790_08505 debf7d1ff18377405a1a75b41cb227ca 317 Gene3D G3DSA:3.40.50.1820 1 317 1.2E-109 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_08505 debf7d1ff18377405a1a75b41cb227ca 317 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 3.3E-6 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_08505 debf7d1ff18377405a1a75b41cb227ca 317 PRINTS PR00111 Alpha/beta hydrolase fold signature 63 78 3.3E-6 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_08505 debf7d1ff18377405a1a75b41cb227ca 317 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 3.3E-6 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_08505 debf7d1ff18377405a1a75b41cb227ca 317 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 40 48 2.9E-13 T 01-11-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 D3790_08505 debf7d1ff18377405a1a75b41cb227ca 317 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 109 123 2.9E-13 T 01-11-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 D3790_08505 debf7d1ff18377405a1a75b41cb227ca 317 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 66 77 2.9E-13 T 01-11-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 D3790_08505 debf7d1ff18377405a1a75b41cb227ca 317 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 13 314 1.9E-127 T 01-11-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 D3790_08505 debf7d1ff18377405a1a75b41cb227ca 317 Pfam PF00561 alpha/beta hydrolase fold 41 297 2.6E-29 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_08505 debf7d1ff18377405a1a75b41cb227ca 317 PIRSF PIRSF006431 2 317 1.1E-135 T 01-11-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 D3790_08505 debf7d1ff18377405a1a75b41cb227ca 317 SUPERFAMILY SSF53474 6 313 1.06E-61 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_11250 0385558878272bec80a7735597a9c5c7 163 Gene3D G3DSA:3.30.70.860 98 163 1.1E-31 T 01-11-2018 IPR035571 UPF0234-like, C-terminal D3790_11250 0385558878272bec80a7735597a9c5c7 163 SUPERFAMILY SSF89963 91 163 3.66E-29 T 01-11-2018 IPR036183 YajQ-like superfamily D3790_11250 0385558878272bec80a7735597a9c5c7 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 3.3E-66 T 01-11-2018 IPR007551 Protein of unknown function DUF520 D3790_11250 0385558878272bec80a7735597a9c5c7 163 SUPERFAMILY SSF89963 2 89 1.65E-30 T 01-11-2018 IPR036183 YajQ-like superfamily D3790_11250 0385558878272bec80a7735597a9c5c7 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 29.822 T 01-11-2018 IPR007551 Protein of unknown function DUF520 D3790_11250 0385558878272bec80a7735597a9c5c7 163 Gene3D G3DSA:3.30.70.990 9 97 4.0E-32 T 01-11-2018 IPR035570 UPF0234, N-terminal D3790_11755 a906be80800bae90e8800d3d01951473 782 Gene3D G3DSA:1.10.287.130 256 353 5.8E-28 T 01-11-2018 D3790_11755 a906be80800bae90e8800d3d01951473 782 SUPERFAMILY SSF47384 275 356 4.71E-22 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D3790_11755 a906be80800bae90e8800d3d01951473 782 SUPERFAMILY SSF52172 540 659 1.28E-27 T 01-11-2018 IPR011006 CheY-like superfamily D3790_11755 a906be80800bae90e8800d3d01951473 782 SMART SM00388 290 355 4.6E-23 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_11755 a906be80800bae90e8800d3d01951473 782 Gene3D G3DSA:1.20.1480.50 163 255 1.1E-5 T 01-11-2018 D3790_11755 a906be80800bae90e8800d3d01951473 782 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 6.2E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_11755 a906be80800bae90e8800d3d01951473 782 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 6.2E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_11755 a906be80800bae90e8800d3d01951473 782 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 6.2E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_11755 a906be80800bae90e8800d3d01951473 782 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 6.2E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_11755 a906be80800bae90e8800d3d01951473 782 Pfam PF00072 Response regulator receiver domain 543 650 1.8E-19 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_11755 a906be80800bae90e8800d3d01951473 782 SMART SM00448 541 650 7.8E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_11755 a906be80800bae90e8800d3d01951473 782 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 354 4.6E-19 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_11755 a906be80800bae90e8800d3d01951473 782 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 517 1.7E-27 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_11755 a906be80800bae90e8800d3d01951473 782 SUPERFAMILY SSF158472 198 247 7.98E-5 T 01-11-2018 D3790_11755 a906be80800bae90e8800d3d01951473 782 SUPERFAMILY SSF55874 344 514 1.28E-42 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_11755 a906be80800bae90e8800d3d01951473 782 Gene3D G3DSA:3.30.565.10 356 522 2.6E-48 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_11755 a906be80800bae90e8800d3d01951473 782 SMART SM00387 402 518 1.2E-36 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_11755 a906be80800bae90e8800d3d01951473 782 Pfam PF01627 Hpt domain 680 761 2.8E-9 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D3790_11755 a906be80800bae90e8800d3d01951473 782 SMART SM00304 198 250 1.2E-5 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D3790_11755 a906be80800bae90e8800d3d01951473 782 Gene3D G3DSA:1.20.120.160 660 772 2.3E-27 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 D3790_11755 a906be80800bae90e8800d3d01951473 782 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 33 175 3.8E-49 T 01-11-2018 IPR019247 Histidine kinase BarA, N-terminal D3790_11755 a906be80800bae90e8800d3d01951473 782 Gene3D G3DSA:3.40.50.2300 534 659 2.2E-28 T 01-11-2018 D3790_11755 a906be80800bae90e8800d3d01951473 782 SUPERFAMILY SSF47226 635 764 2.75E-16 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 D3790_11760 7d7d921aefcc1d42b177242c68fd1da4 451 SUPERFAMILY SSF53335 76 439 4.25E-80 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_11760 7d7d921aefcc1d42b177242c68fd1da4 451 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 100 439 1.3E-27 T 01-11-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 D3790_11760 7d7d921aefcc1d42b177242c68fd1da4 451 Gene3D G3DSA:2.40.50.140 1 87 8.8E-31 T 01-11-2018 D3790_11760 7d7d921aefcc1d42b177242c68fd1da4 451 SUPERFAMILY SSF50249 3 68 5.25E-13 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_11760 7d7d921aefcc1d42b177242c68fd1da4 451 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 371 401 - T 01-11-2018 IPR030390 RNA methyltransferase TrmA, active site D3790_11760 7d7d921aefcc1d42b177242c68fd1da4 451 Pfam PF01938 TRAM domain 18 67 1.4E-8 T 01-11-2018 IPR002792 TRAM domain D3790_11760 7d7d921aefcc1d42b177242c68fd1da4 451 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 432 2.2E-133 T 01-11-2018 D3790_11760 7d7d921aefcc1d42b177242c68fd1da4 451 Gene3D G3DSA:3.40.50.150 88 434 1.6E-114 T 01-11-2018 D3790_11760 7d7d921aefcc1d42b177242c68fd1da4 451 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 440 61.991 T 01-11-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 D3790_11760 7d7d921aefcc1d42b177242c68fd1da4 451 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 422 432 - T 01-11-2018 IPR030391 RNA methyltransferase TrmA, conserved site D3790_11760 7d7d921aefcc1d42b177242c68fd1da4 451 Gene3D G3DSA:3.40.1350.30 134 272 1.6E-114 T 01-11-2018 D3790_06030 611b979f9550f6fecefc8e2ba94f3371 1202 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 15 1195 1.1E-294 T 01-11-2018 IPR017731 Type VI secretion system, IcmF D3790_06030 611b979f9550f6fecefc8e2ba94f3371 1202 Pfam PF06744 Type VI secretion protein IcmF C-terminal 940 1140 2.9E-49 T 01-11-2018 IPR010623 Type VI secretion system IcmF, C-terminal D3790_06030 611b979f9550f6fecefc8e2ba94f3371 1202 Gene3D G3DSA:3.40.50.300 143 330 1.9E-6 T 01-11-2018 D3790_06030 611b979f9550f6fecefc8e2ba94f3371 1202 Pfam PF14331 ImcF-related N-terminal domain 208 476 2.6E-85 T 01-11-2018 IPR025743 ImcF-related, N-terminal domain D3790_06030 611b979f9550f6fecefc8e2ba94f3371 1202 SUPERFAMILY SSF52540 143 325 1.98E-10 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_06030 611b979f9550f6fecefc8e2ba94f3371 1202 Pfam PF06761 Intracellular multiplication and human macrophage-killing 527 830 1.9E-77 T 01-11-2018 IPR009612 ImcF-related D3790_01450 b6ca96a6772f6f48da5a34d7f6961054 548 SUPERFAMILY SSF54849 137 203 6.64E-24 T 01-11-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily D3790_01450 b6ca96a6772f6f48da5a34d7f6961054 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 9.6E-254 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D3790_01450 b6ca96a6772f6f48da5a34d7f6961054 548 Gene3D G3DSA:1.10.560.10 8 521 6.5E-238 T 01-11-2018 IPR027413 GroEL-like equatorial domain superfamily D3790_01450 b6ca96a6772f6f48da5a34d7f6961054 548 Gene3D G3DSA:3.50.7.10 192 372 6.5E-238 T 01-11-2018 IPR027409 GroEL-like apical domain superfamily D3790_01450 b6ca96a6772f6f48da5a34d7f6961054 548 Gene3D G3DSA:3.30.260.10 136 410 6.5E-238 T 01-11-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily D3790_01450 b6ca96a6772f6f48da5a34d7f6961054 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.349 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D3790_01450 b6ca96a6772f6f48da5a34d7f6961054 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.7E-95 T 01-11-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 D3790_01450 b6ca96a6772f6f48da5a34d7f6961054 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.7E-74 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D3790_01450 b6ca96a6772f6f48da5a34d7f6961054 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.7E-74 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D3790_01450 b6ca96a6772f6f48da5a34d7f6961054 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.7E-74 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D3790_01450 b6ca96a6772f6f48da5a34d7f6961054 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.7E-74 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D3790_01450 b6ca96a6772f6f48da5a34d7f6961054 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.7E-74 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D3790_01450 b6ca96a6772f6f48da5a34d7f6961054 548 SUPERFAMILY SSF52029 184 376 1.05E-81 T 01-11-2018 IPR027409 GroEL-like apical domain superfamily D3790_01450 b6ca96a6772f6f48da5a34d7f6961054 548 SUPERFAMILY SSF48592 7 521 1.45E-76 T 01-11-2018 IPR027413 GroEL-like equatorial domain superfamily D3790_01450 b6ca96a6772f6f48da5a34d7f6961054 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 01-11-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D3790_06325 19378d369f63b823d5486c315c418198 187 Gene3D G3DSA:2.60.120.650 2 154 6.5E-32 T 01-11-2018 D3790_06325 19378d369f63b823d5486c315c418198 187 SUPERFAMILY SSF51197 9 165 5.91E-34 T 01-11-2018 D3790_06325 19378d369f63b823d5486c315c418198 187 Pfam PF13621 Cupin-like domain 14 147 3.3E-13 T 01-11-2018 D3790_06325 19378d369f63b823d5486c315c418198 187 SMART SM00558 13 169 5.3E-14 T 01-11-2018 IPR003347 JmjC domain D3790_00385 ebe704b9fa4eda27d2934b3fd44e9eaa 56 Pfam PF08887 GAD-like domain 2 49 3.8E-12 T 01-11-2018 IPR014983 GAD-related D3790_12835 1442346eb353921ba006e7dfbfe174cc 325 Gene3D G3DSA:3.30.930.10 1 324 1.6E-121 T 01-11-2018 D3790_12835 1442346eb353921ba006e7dfbfe174cc 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 55.784 T 01-11-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 D3790_12835 1442346eb353921ba006e7dfbfe174cc 325 SUPERFAMILY SSF55681 13 322 2.19E-84 T 01-11-2018 D3790_12835 1442346eb353921ba006e7dfbfe174cc 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 3.1E-6 T 01-11-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D3790_12835 1442346eb353921ba006e7dfbfe174cc 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 3.1E-6 T 01-11-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D3790_12835 1442346eb353921ba006e7dfbfe174cc 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 14 321 3.5E-48 T 01-11-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_12835 1442346eb353921ba006e7dfbfe174cc 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 4.7E-132 T 01-11-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 D3790_05870 b16e4f818bb08a30ea7a695460bff46b 535 Pfam PF00704 Glycosyl hydrolases family 18 76 495 1.2E-59 T 01-11-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 D3790_05870 b16e4f818bb08a30ea7a695460bff46b 535 SUPERFAMILY SSF54556 388 465 1.65E-7 T 01-11-2018 IPR029070 Chitinase insertion domain superfamily D3790_05870 b16e4f818bb08a30ea7a695460bff46b 535 SUPERFAMILY SSF51445 67 497 7.26E-64 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily D3790_05870 b16e4f818bb08a30ea7a695460bff46b 535 SMART SM00636 74 495 3.6E-60 T 01-11-2018 IPR011583 Chitinase II GO:0008061 D3790_05870 b16e4f818bb08a30ea7a695460bff46b 535 Gene3D G3DSA:3.10.50.10 33 468 9.7E-190 T 01-11-2018 IPR029070 Chitinase insertion domain superfamily D3790_05870 b16e4f818bb08a30ea7a695460bff46b 535 Gene3D G3DSA:3.20.20.80 66 522 9.7E-190 T 01-11-2018 D3790_13215 e81bcb91f9052be527d86bbff2f474f1 313 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.172 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D3790_13215 e81bcb91f9052be527d86bbff2f474f1 313 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 4.8E-119 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D3790_13215 e81bcb91f9052be527d86bbff2f474f1 313 Gene3D G3DSA:3.40.50.1370 8 304 7.1E-123 T 01-11-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 D3790_13215 e81bcb91f9052be527d86bbff2f474f1 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.7E-36 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D3790_13215 e81bcb91f9052be527d86bbff2f474f1 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.7E-36 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D3790_13215 e81bcb91f9052be527d86bbff2f474f1 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.7E-36 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D3790_13215 e81bcb91f9052be527d86bbff2f474f1 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.7E-36 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D3790_13215 e81bcb91f9052be527d86bbff2f474f1 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.7E-36 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D3790_13215 e81bcb91f9052be527d86bbff2f474f1 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.7E-36 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D3790_13215 e81bcb91f9052be527d86bbff2f474f1 313 SUPERFAMILY SSF53671 4 307 1.26E-99 T 01-11-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 D3790_13215 e81bcb91f9052be527d86bbff2f474f1 313 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 3.1E-47 T 01-11-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 D3790_13215 e81bcb91f9052be527d86bbff2f474f1 313 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 6.0E-27 T 01-11-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 D3790_13215 e81bcb91f9052be527d86bbff2f474f1 313 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D3790_13215 e81bcb91f9052be527d86bbff2f474f1 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.9E-25 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D3790_13215 e81bcb91f9052be527d86bbff2f474f1 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 2.9E-25 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D3790_13215 e81bcb91f9052be527d86bbff2f474f1 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 2.9E-25 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D3790_13215 e81bcb91f9052be527d86bbff2f474f1 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 2.9E-25 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D3790_13215 e81bcb91f9052be527d86bbff2f474f1 313 Gene3D G3DSA:3.40.50.1370 135 292 7.1E-123 T 01-11-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 D3790_09975 a6a7d19ff41654e117efc28ada0bb6d3 235 Gene3D G3DSA:2.30.210.20 3 60 1.1E-22 T 01-11-2018 D3790_09975 a6a7d19ff41654e117efc28ada0bb6d3 235 SUPERFAMILY SSF55729 4 227 1.01E-87 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_09975 a6a7d19ff41654e117efc28ada0bb6d3 235 Gene3D G3DSA:3.40.630.70 61 233 6.2E-67 T 01-11-2018 D3790_09975 a6a7d19ff41654e117efc28ada0bb6d3 235 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 39 213 4.0E-70 T 01-11-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 D3790_09975 a6a7d19ff41654e117efc28ada0bb6d3 235 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 235 86.404 T 01-11-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 D3790_09975 a6a7d19ff41654e117efc28ada0bb6d3 235 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 35 201 5.1E-67 T 01-11-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 D3790_14075 a3fab8aeb7f89fbee6997e3792552ffd 272 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 270 1.2E-93 T 01-11-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 D3790_14075 a3fab8aeb7f89fbee6997e3792552ffd 272 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 269 32.256 T 01-11-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 D3790_14075 a3fab8aeb7f89fbee6997e3792552ffd 272 SUPERFAMILY SSF51735 102 268 5.36E-40 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_14075 a3fab8aeb7f89fbee6997e3792552ffd 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 3.4E-24 T 01-11-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 D3790_14075 a3fab8aeb7f89fbee6997e3792552ffd 272 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 118 190 1.0E-12 T 01-11-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase D3790_14075 a3fab8aeb7f89fbee6997e3792552ffd 272 Gene3D G3DSA:3.40.50.720 102 244 2.7E-83 T 01-11-2018 D3790_14075 a3fab8aeb7f89fbee6997e3792552ffd 272 SUPERFAMILY SSF53223 2 101 9.21E-32 T 01-11-2018 D3790_14075 a3fab8aeb7f89fbee6997e3792552ffd 272 Gene3D G3DSA:3.40.50.10860 6 254 2.7E-83 T 01-11-2018 D3790_13770 372be66316647ba2dda4c3437a66767a 141 Pfam PF01850 PIN domain 5 129 2.0E-11 T 01-11-2018 IPR002716 PIN domain D3790_13770 372be66316647ba2dda4c3437a66767a 141 SUPERFAMILY SSF88723 2 136 5.05E-29 T 01-11-2018 IPR029060 PIN-like domain superfamily D3790_13770 372be66316647ba2dda4c3437a66767a 141 Gene3D G3DSA:3.40.50.1010 1 137 1.9E-31 T 01-11-2018 D3790_01150 6906cdc707117821f54352ebbde3e46e 305 Gene3D G3DSA:3.40.190.10 166 266 9.0E-44 T 01-11-2018 D3790_01150 6906cdc707117821f54352ebbde3e46e 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.8E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_01150 6906cdc707117821f54352ebbde3e46e 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.8E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_01150 6906cdc707117821f54352ebbde3e46e 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.8E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_01150 6906cdc707117821f54352ebbde3e46e 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 3.1E-16 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_01150 6906cdc707117821f54352ebbde3e46e 305 SUPERFAMILY SSF46785 6 91 1.92E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_01150 6906cdc707117821f54352ebbde3e46e 305 Gene3D G3DSA:3.40.190.10 95 290 9.0E-44 T 01-11-2018 D3790_01150 6906cdc707117821f54352ebbde3e46e 305 SUPERFAMILY SSF53850 92 299 1.63E-33 T 01-11-2018 D3790_01150 6906cdc707117821f54352ebbde3e46e 305 Gene3D G3DSA:1.10.10.10 6 92 7.0E-25 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_01150 6906cdc707117821f54352ebbde3e46e 305 Pfam PF03466 LysR substrate binding domain 91 295 3.1E-33 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_00475 2f3fd1b5f9621373ec5b69ba5e9442db 581 Gene3D G3DSA:3.40.50.1220 216 376 4.2E-34 T 01-11-2018 D3790_00475 2f3fd1b5f9621373ec5b69ba5e9442db 581 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 414 558 4.5E-30 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 D3790_00475 2f3fd1b5f9621373ec5b69ba5e9442db 581 Gene3D G3DSA:3.40.50.970 2 192 1.3E-43 T 01-11-2018 D3790_00475 2f3fd1b5f9621373ec5b69ba5e9442db 581 SUPERFAMILY SSF52467 219 382 5.45E-27 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily D3790_00475 2f3fd1b5f9621373ec5b69ba5e9442db 581 Gene3D G3DSA:3.40.50.970 383 578 1.5E-47 T 01-11-2018 D3790_00475 2f3fd1b5f9621373ec5b69ba5e9442db 581 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 185 1.7E-37 T 01-11-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 D3790_00475 2f3fd1b5f9621373ec5b69ba5e9442db 581 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 220 351 2.8E-21 T 01-11-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 D3790_00475 2f3fd1b5f9621373ec5b69ba5e9442db 581 SUPERFAMILY SSF52518 9 186 1.23E-32 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_00475 2f3fd1b5f9621373ec5b69ba5e9442db 581 SUPERFAMILY SSF52518 393 567 1.18E-44 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_00475 2f3fd1b5f9621373ec5b69ba5e9442db 581 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 451 470 - T 01-11-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 D3790_18780 9c384abe9d957fb85c8431aea8cbcd84 327 Gene3D G3DSA:3.40.50.720 124 269 4.4E-118 T 01-11-2018 D3790_18780 9c384abe9d957fb85c8431aea8cbcd84 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 89 6.6E-10 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 D3790_18780 9c384abe9d957fb85c8431aea8cbcd84 327 SMART SM00829 11 325 1.9E-31 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 D3790_18780 9c384abe9d957fb85c8431aea8cbcd84 327 Gene3D G3DSA:3.90.180.10 11 321 4.4E-118 T 01-11-2018 D3790_18780 9c384abe9d957fb85c8431aea8cbcd84 327 Pfam PF00107 Zinc-binding dehydrogenase 152 260 1.9E-28 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 D3790_18780 9c384abe9d957fb85c8431aea8cbcd84 327 SUPERFAMILY SSF50129 10 142 2.43E-34 T 01-11-2018 IPR011032 GroES-like superfamily D3790_18780 9c384abe9d957fb85c8431aea8cbcd84 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 01-11-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 D3790_18780 9c384abe9d957fb85c8431aea8cbcd84 327 SUPERFAMILY SSF51735 113 273 1.52E-47 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_04430 24462ef7c35d9808fc3ff42cf07e0246 396 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 392 5.2E-58 T 01-11-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 D3790_04430 24462ef7c35d9808fc3ff42cf07e0246 396 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 5.1E-19 T 01-11-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 D3790_04430 24462ef7c35d9808fc3ff42cf07e0246 396 Pfam PF07670 Nucleoside recognition 92 190 7.7E-7 T 01-11-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 D3790_08535 2170c285d47d06dc59c554c8cd33c547 321 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 3 116 1.7E-43 T 01-11-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 D3790_08535 2170c285d47d06dc59c554c8cd33c547 321 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 164 311 2.0E-54 T 01-11-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 D3790_08535 2170c285d47d06dc59c554c8cd33c547 321 Pfam PF03610 PTS system fructose IIA component 5 116 2.8E-34 T 01-11-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 D3790_08535 2170c285d47d06dc59c554c8cd33c547 321 Pfam PF03830 PTS system sorbose subfamily IIB component 164 310 1.8E-52 T 01-11-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 D3790_08535 2170c285d47d06dc59c554c8cd33c547 321 SUPERFAMILY SSF53062 3 128 5.23E-37 T 01-11-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 D3790_08535 2170c285d47d06dc59c554c8cd33c547 321 SUPERFAMILY SSF52728 162 320 2.49E-52 T 01-11-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 D3790_08535 2170c285d47d06dc59c554c8cd33c547 321 Gene3D G3DSA:3.40.35.10 159 321 1.2E-57 T 01-11-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 D3790_08535 2170c285d47d06dc59c554c8cd33c547 321 Gene3D G3DSA:3.40.50.510 2 133 2.7E-41 T 01-11-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 SUPERFAMILY SSF56801 1562 2126 2.09E-139 T 01-11-2018 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Pfam PF00550 Phosphopantetheine attachment site 1045 1109 3.7E-14 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Pfam PF00550 Phosphopantetheine attachment site 3184 3246 5.6E-12 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Pfam PF00550 Phosphopantetheine attachment site 2120 2178 2.9E-6 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Gene3D G3DSA:3.30.559.30 250 493 6.3E-125 T 01-11-2018 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 SUPERFAMILY SSF52777 2213 2387 5.11E-26 T 01-11-2018 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 SUPERFAMILY SSF53474 3276 3493 5.55E-31 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Gene3D G3DSA:1.10.1200.10 2104 2184 1.2E-18 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Gene3D G3DSA:3.30.300.30 3065 3168 3.2E-27 T 01-11-2018 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Pfam PF13193 AMP-binding enzyme C-terminal domain 3079 3156 7.4E-6 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Pfam PF13193 AMP-binding enzyme C-terminal domain 943 1015 2.8E-6 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2139 2154 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Gene3D G3DSA:1.10.1200.10 1030 1117 1.4E-24 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Gene3D G3DSA:3.30.300.30 2002 2103 2.8E-28 T 01-11-2018 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Gene3D G3DSA:3.30.300.30 930 1029 8.8E-27 T 01-11-2018 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Gene3D G3DSA:3.30.559.30 1317 1559 1.5E-135 T 01-11-2018 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Gene3D G3DSA:3.40.50.12780 1590 1999 2.3E-114 T 01-11-2018 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1621 2030 5.8E-110 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 556 959 8.8E-135 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2687 3095 9.6E-115 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 SUPERFAMILY SSF47336 1036 1145 1.7E-19 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Gene3D G3DSA:3.30.559.10 2219 2574 2.4E-55 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 SUPERFAMILY SSF52777 71 266 1.56E-38 T 01-11-2018 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 SUPERFAMILY SSF52777 1135 1313 4.67E-43 T 01-11-2018 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 SUPERFAMILY SSF47336 3178 3258 1.14E-10 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Gene3D G3DSA:3.30.559.10 73 439 6.3E-125 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Gene3D G3DSA:3.30.559.30 2395 2639 2.4E-55 T 01-11-2018 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Gene3D G3DSA:3.30.559.10 1134 1507 1.5E-135 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 SUPERFAMILY SSF47336 2107 2179 1.05E-13 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1068 1083 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 ProSitePatterns PS00455 Putative AMP-binding domain signature. 677 688 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 SUPERFAMILY SSF52777 254 494 2.78E-53 T 01-11-2018 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Pfam PF00501 AMP-binding enzyme 1600 2007 1.0E-89 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Pfam PF00501 AMP-binding enzyme 531 935 1.3E-103 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Pfam PF00501 AMP-binding enzyme 2667 3071 1.8E-86 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2806 2817 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 SUPERFAMILY SSF56801 2635 3194 5.49E-128 T 01-11-2018 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 SUPERFAMILY SSF56801 494 1056 2.09E-149 T 01-11-2018 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Gene3D G3DSA:3.40.50.1820 3268 3496 3.8E-34 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1744 1755 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Gene3D G3DSA:3.40.50.12780 524 927 2.3E-135 T 01-11-2018 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Gene3D G3DSA:3.40.50.12780 2660 3063 6.2E-110 T 01-11-2018 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 SMART SM00823 Phosphopantetheine attachment site 3185 3237 0.3 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 SMART SM00823 Phosphopantetheine attachment site 1044 1113 7.6E-4 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 SUPERFAMILY SSF52777 2397 2629 8.89E-24 T 01-11-2018 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 SUPERFAMILY SSF52777 1320 1561 3.89E-54 T 01-11-2018 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Gene3D G3DSA:1.10.1200.10 3170 3260 9.0E-12 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Pfam PF00668 Condensation domain 1132 1579 4.2E-104 T 01-11-2018 IPR001242 Condensation domain D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Pfam PF00668 Condensation domain 2215 2645 3.7E-46 T 01-11-2018 IPR001242 Condensation domain D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Pfam PF00668 Condensation domain 71 510 8.0E-95 T 01-11-2018 IPR001242 Condensation domain D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Pfam PF00975 Thioesterase domain 3283 3490 1.8E-16 T 01-11-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 D3790_06295 fa2754381f63e70897a9973e64542fcc 3640 Gene3D G3DSA:1.10.10.1830 2 56 1.4E-11 T 01-11-2018 D3790_14525 e2427cbaa583e996ebea1283f8c94b89 256 SUPERFAMILY SSF110997 182 252 3.14E-18 T 01-11-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D3790_14525 e2427cbaa583e996ebea1283f8c94b89 256 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 174 3.7E-34 T 01-11-2018 IPR011930 Cell division protein FtsN GO:0005515 D3790_14525 e2427cbaa583e996ebea1283f8c94b89 256 Pfam PF05036 Sporulation related domain 183 252 8.5E-15 T 01-11-2018 IPR007730 Sporulation-like domain GO:0042834 D3790_14525 e2427cbaa583e996ebea1283f8c94b89 256 Hamap MF_02039 Cell division protein FtsN [ftsN]. 33 256 29.395 T 01-11-2018 IPR011930 Cell division protein FtsN GO:0005515 D3790_14525 e2427cbaa583e996ebea1283f8c94b89 256 Gene3D G3DSA:3.30.70.1070 178 256 3.2E-28 T 01-11-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D3790_02880 1eb0cff1a3dfaccd558b8eef36867fa5 153 SUPERFAMILY SSF53271 4 145 1.84E-31 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like D3790_02880 1eb0cff1a3dfaccd558b8eef36867fa5 153 Gene3D G3DSA:3.40.50.2020 1 152 5.6E-43 T 01-11-2018 D3790_02880 1eb0cff1a3dfaccd558b8eef36867fa5 153 Pfam PF00156 Phosphoribosyl transferase domain 12 143 2.2E-15 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 D3790_02880 1eb0cff1a3dfaccd558b8eef36867fa5 153 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 41.285 T 01-11-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 D3790_04285 b6b9d108ce1a2f33c7e0dda4917cceaf 510 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 01-11-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 D3790_04285 b6b9d108ce1a2f33c7e0dda4917cceaf 510 SUPERFAMILY SSF48557 4 498 6.83E-192 T 01-11-2018 IPR008948 L-Aspartase-like GO:0003824 D3790_04285 b6b9d108ce1a2f33c7e0dda4917cceaf 510 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.737 T 01-11-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D3790_04285 b6b9d108ce1a2f33c7e0dda4917cceaf 510 Pfam PF00221 Aromatic amino acid lyase 11 470 5.1E-189 T 01-11-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 D3790_04285 b6b9d108ce1a2f33c7e0dda4917cceaf 510 Gene3D G3DSA:1.20.200.10 198 508 5.1E-123 T 01-11-2018 D3790_04285 b6b9d108ce1a2f33c7e0dda4917cceaf 510 Gene3D G3DSA:1.10.275.10 2 197 2.1E-71 T 01-11-2018 IPR024083 Fumarase/histidase, N-terminal D3790_04285 b6b9d108ce1a2f33c7e0dda4917cceaf 510 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 503 3.0E-223 T 01-11-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D3790_14345 ed54713c10e8b8079a6c16c05659cb92 316 Gene3D G3DSA:3.40.50.300 9 316 1.9E-94 T 01-11-2018 D3790_14345 ed54713c10e8b8079a6c16c05659cb92 316 PIRSF PIRSF000545 1 316 4.4E-148 T 01-11-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 D3790_14345 ed54713c10e8b8079a6c16c05659cb92 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 187.132 T 01-11-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 D3790_14345 ed54713c10e8b8079a6c16c05659cb92 316 SUPERFAMILY SSF52540 10 315 1.71E-79 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_14345 ed54713c10e8b8079a6c16c05659cb92 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 3.1E-163 T 01-11-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 D3790_14345 ed54713c10e8b8079a6c16c05659cb92 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 243 6.4E-16 T 01-11-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 D3790_10525 570a0039e07c55920346cf5b8474e118 199 Gene3D G3DSA:3.40.50.150 1 193 9.0E-56 T 01-11-2018 D3790_10525 570a0039e07c55920346cf5b8474e118 199 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 13 132 3.5E-35 T 01-11-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 D3790_10525 570a0039e07c55920346cf5b8474e118 199 Pfam PF05175 Methyltransferase small domain 24 130 7.6E-8 T 01-11-2018 IPR007848 Methyltransferase small domain GO:0008168 D3790_10525 570a0039e07c55920346cf5b8474e118 199 SUPERFAMILY SSF53335 8 148 2.19E-26 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_06190 696f27d0a10e81c1b5574b2810976079 447 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 5.6E-140 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 D3790_06190 696f27d0a10e81c1b5574b2810976079 447 Gene3D G3DSA:3.40.50.720 235 446 1.2E-78 T 01-11-2018 D3790_06190 696f27d0a10e81c1b5574b2810976079 447 Gene3D G3DSA:3.40.50.720 1 202 5.9E-79 T 01-11-2018 D3790_06190 696f27d0a10e81c1b5574b2810976079 447 PIRSF PIRSF000124 1 439 7.5E-152 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 D3790_06190 696f27d0a10e81c1b5574b2810976079 447 Gene3D G3DSA:1.20.5.100 203 233 6.3E-18 T 01-11-2018 D3790_06190 696f27d0a10e81c1b5574b2810976079 447 SMART SM00984 320 424 7.2E-50 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D3790_06190 696f27d0a10e81c1b5574b2810976079 447 SUPERFAMILY SSF48179 203 300 1.53E-34 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D3790_06190 696f27d0a10e81c1b5574b2810976079 447 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 3.3E-64 T 01-11-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D3790_06190 696f27d0a10e81c1b5574b2810976079 447 SUPERFAMILY SSF52413 309 435 3.27E-40 T 01-11-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 D3790_06190 696f27d0a10e81c1b5574b2810976079 447 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 2.2E-39 T 01-11-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D3790_06190 696f27d0a10e81c1b5574b2810976079 447 SUPERFAMILY SSF51735 1 195 3.83E-56 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_06190 696f27d0a10e81c1b5574b2810976079 447 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 424 3.3E-30 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D3790_06190 696f27d0a10e81c1b5574b2810976079 447 PIRSF PIRSF500134 1 442 4.1E-193 T 01-11-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 D3790_15480 dd1589fb0ba088109f7ceb4a657dfcef 462 Gene3D G3DSA:3.90.550.10 9 232 6.4E-70 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_15480 dd1589fb0ba088109f7ceb4a657dfcef 462 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 10 457 42.671 T 01-11-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 D3790_15480 dd1589fb0ba088109f7ceb4a657dfcef 462 SUPERFAMILY SSF53448 12 257 1.61E-66 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_15480 dd1589fb0ba088109f7ceb4a657dfcef 462 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 359 387 0.003 T 01-11-2018 IPR001451 Hexapeptide repeat D3790_15480 dd1589fb0ba088109f7ceb4a657dfcef 462 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 271 304 7.4E-4 T 01-11-2018 IPR001451 Hexapeptide repeat D3790_15480 dd1589fb0ba088109f7ceb4a657dfcef 462 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 400 434 9.0E-7 T 01-11-2018 IPR001451 Hexapeptide repeat D3790_15480 dd1589fb0ba088109f7ceb4a657dfcef 462 Gene3D G3DSA:2.160.10.10 233 461 6.7E-71 T 01-11-2018 D3790_15480 dd1589fb0ba088109f7ceb4a657dfcef 462 SUPERFAMILY SSF51161 224 459 1.18E-49 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily D3790_15480 dd1589fb0ba088109f7ceb4a657dfcef 462 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 12 460 6.5E-204 T 01-11-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 D3790_15480 dd1589fb0ba088109f7ceb4a657dfcef 462 Pfam PF12804 MobA-like NTP transferase domain 13 127 2.8E-20 T 01-11-2018 IPR025877 MobA-like NTP transferase D3790_15665 17fd68fae3ab7ef693eb9b57ceaaeafa 166 Pfam PF13508 Acetyltransferase (GNAT) domain 43 144 2.9E-8 T 01-11-2018 IPR000182 GNAT domain D3790_15665 17fd68fae3ab7ef693eb9b57ceaaeafa 166 Gene3D G3DSA:3.40.630.30 2 157 2.7E-43 T 01-11-2018 D3790_15665 17fd68fae3ab7ef693eb9b57ceaaeafa 166 SUPERFAMILY SSF55729 17 145 2.3E-13 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_14715 b3e5c6a77ec8ffdbf4d0ec9d9b23d60f 152 Gene3D G3DSA:2.70.40.10 1 151 4.0E-53 T 01-11-2018 IPR036157 dUTPase-like superfamily D3790_14715 b3e5c6a77ec8ffdbf4d0ec9d9b23d60f 152 Pfam PF00692 dUTPase 17 150 9.5E-43 T 01-11-2018 IPR029054 dUTPase-like D3790_14715 b3e5c6a77ec8ffdbf4d0ec9d9b23d60f 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 11 151 2.4E-49 T 01-11-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 D3790_14715 b3e5c6a77ec8ffdbf4d0ec9d9b23d60f 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 7 151 33.922 T 01-11-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 D3790_14715 b3e5c6a77ec8ffdbf4d0ec9d9b23d60f 152 SUPERFAMILY SSF51283 1 151 3.27E-55 T 01-11-2018 IPR036157 dUTPase-like superfamily D3790_11390 7097e0c1ef0d73233809e27a0347a188 284 SUPERFAMILY SSF54637 5 114 2.63E-41 T 01-11-2018 IPR029069 HotDog domain superfamily D3790_11390 7097e0c1ef0d73233809e27a0347a188 284 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 13 282 1.6E-92 T 01-11-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 D3790_11390 7097e0c1ef0d73233809e27a0347a188 284 Pfam PF13622 Thioesterase-like superfamily 33 281 3.0E-56 T 01-11-2018 D3790_11390 7097e0c1ef0d73233809e27a0347a188 284 Gene3D G3DSA:3.10.129.90 1 283 3.1E-101 T 01-11-2018 D3790_11390 7097e0c1ef0d73233809e27a0347a188 284 SUPERFAMILY SSF54637 116 283 8.65E-51 T 01-11-2018 IPR029069 HotDog domain superfamily D3790_00665 1a0623402c4a40d491c6cdf06fea1565 458 SUPERFAMILY SSF52540 189 441 8.51E-45 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_00665 1a0623402c4a40d491c6cdf06fea1565 458 Pfam PF03796 DnaB-like helicase C terminal domain 191 448 2.9E-91 T 01-11-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 D3790_00665 1a0623402c4a40d491c6cdf06fea1565 458 SUPERFAMILY SSF48024 16 123 9.55E-34 T 01-11-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 D3790_00665 1a0623402c4a40d491c6cdf06fea1565 458 Gene3D G3DSA:1.10.860.10 10 170 1.2E-46 T 01-11-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal D3790_00665 1a0623402c4a40d491c6cdf06fea1565 458 Pfam PF00772 DnaB-like helicase N terminal domain 19 116 4.1E-30 T 01-11-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 D3790_00665 1a0623402c4a40d491c6cdf06fea1565 458 Gene3D G3DSA:3.40.50.300 171 454 8.9E-92 T 01-11-2018 D3790_00665 1a0623402c4a40d491c6cdf06fea1565 458 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 17 450 3.4E-143 T 01-11-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 D3790_10010 090d14eff4dde7352f58707073cad8da 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_10010 090d14eff4dde7352f58707073cad8da 242 Gene3D G3DSA:3.40.50.300 1 241 7.1E-68 T 01-11-2018 D3790_10010 090d14eff4dde7352f58707073cad8da 242 PIRSF PIRSF039085 1 242 1.5E-86 T 01-11-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 D3790_10010 090d14eff4dde7352f58707073cad8da 242 Pfam PF00005 ABC transporter 20 170 4.2E-34 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_10010 090d14eff4dde7352f58707073cad8da 242 SMART SM00382 27 218 9.0E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_10010 090d14eff4dde7352f58707073cad8da 242 SUPERFAMILY SSF52540 3 233 6.03E-69 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_13175 0e05b3d0dcfcb66f03fcfdc3f73f6c53 181 Gene3D G3DSA:3.20.170.30 98 181 2.9E-31 T 01-11-2018 D3790_13175 0e05b3d0dcfcb66f03fcfdc3f73f6c53 181 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 4 171 5.5E-39 T 01-11-2018 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 D3790_13175 0e05b3d0dcfcb66f03fcfdc3f73f6c53 181 Gene3D G3DSA:1.10.10.970 5 77 6.7E-18 T 01-11-2018 D3790_13175 0e05b3d0dcfcb66f03fcfdc3f73f6c53 181 Hamap MF_00299 Probable RNA 2'-phosphotransferase [kptA]. 4 178 33.598 T 01-11-2018 IPR022928 RNA 2'-phosphotransferase KptA, putative GO:0016773 D3790_13175 0e05b3d0dcfcb66f03fcfdc3f73f6c53 181 SUPERFAMILY SSF56399 7 179 1.37E-56 T 01-11-2018 D3790_05230 e290182791137a01a338f819495de68e 415 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 6 415 1.3E-198 T 01-11-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 D3790_05230 e290182791137a01a338f819495de68e 415 Pfam PF02687 FtsX-like permease family 302 408 4.4E-13 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 D3790_05230 e290182791137a01a338f819495de68e 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 414 2.8E-152 T 01-11-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 D3790_05230 e290182791137a01a338f819495de68e 415 Pfam PF12704 MacB-like periplasmic core domain 28 235 6.9E-14 T 01-11-2018 IPR025857 MacB-like periplasmic core domain D3790_06375 ca3e4cb9218dacb6b2a86723962e0e96 178 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 7.2E-69 T 01-11-2018 IPR006008 Intracellular septation protein A GO:0016021 D3790_06375 ca3e4cb9218dacb6b2a86723962e0e96 178 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.002 T 01-11-2018 IPR006008 Intracellular septation protein A GO:0016021 D3790_06375 ca3e4cb9218dacb6b2a86723962e0e96 178 Pfam PF04279 Intracellular septation protein A 1 175 1.3E-69 T 01-11-2018 IPR006008 Intracellular septation protein A GO:0016021 D3790_14520 a8ade71a05f3543b2f68495dec7b87f9 341 SUPERFAMILY SSF47413 8 66 1.22E-15 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_14520 a8ade71a05f3543b2f68495dec7b87f9 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 54 5.6E-18 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D3790_14520 a8ade71a05f3543b2f68495dec7b87f9 341 Gene3D G3DSA:3.40.50.2300 167 296 1.1E-77 T 01-11-2018 D3790_14520 a8ade71a05f3543b2f68495dec7b87f9 341 Pfam PF13377 Periplasmic binding protein-like domain 175 336 1.1E-36 T 01-11-2018 D3790_14520 a8ade71a05f3543b2f68495dec7b87f9 341 Gene3D G3DSA:3.40.50.2300 72 314 1.1E-77 T 01-11-2018 D3790_14520 a8ade71a05f3543b2f68495dec7b87f9 341 SUPERFAMILY SSF53822 68 339 3.53E-88 T 01-11-2018 IPR028082 Periplasmic binding protein-like I D3790_14520 a8ade71a05f3543b2f68495dec7b87f9 341 Gene3D G3DSA:1.10.260.40 1 66 7.2E-24 T 01-11-2018 D3790_14520 a8ade71a05f3543b2f68495dec7b87f9 341 SMART SM00354 8 78 8.0E-26 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D3790_08205 bd8b03629d05f1f337db577b066c848b 318 Pfam PF01476 LysM domain 55 90 2.7E-4 T 01-11-2018 IPR018392 LysM domain D3790_08205 bd8b03629d05f1f337db577b066c848b 318 SMART SM00257 44 90 0.0071 T 01-11-2018 IPR018392 LysM domain D3790_08205 bd8b03629d05f1f337db577b066c848b 318 SUPERFAMILY SSF141523 96 238 1.57E-27 T 01-11-2018 IPR038063 L,D-transpeptidase catalytic domain-like D3790_08205 bd8b03629d05f1f337db577b066c848b 318 Pfam PF03734 L,D-transpeptidase catalytic domain 102 237 8.0E-17 T 01-11-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 D3790_08205 bd8b03629d05f1f337db577b066c848b 318 Gene3D G3DSA:2.40.440.10 25 308 6.0E-82 T 01-11-2018 IPR038063 L,D-transpeptidase catalytic domain-like D3790_17540 6002233ed9e07a04b3282d54d8976c04 328 Gene3D G3DSA:1.20.58.1130 9 207 4.9E-86 T 01-11-2018 D3790_17540 6002233ed9e07a04b3282d54d8976c04 328 Pfam PF01699 Sodium/calcium exchanger protein 176 317 1.8E-30 T 01-11-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 D3790_17540 6002233ed9e07a04b3282d54d8976c04 328 Pfam PF01699 Sodium/calcium exchanger protein 5 142 8.2E-25 T 01-11-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 D3790_17540 6002233ed9e07a04b3282d54d8976c04 328 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 5.8E-82 T 01-11-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 D3790_17540 6002233ed9e07a04b3282d54d8976c04 328 Gene3D G3DSA:1.20.1420.30 35 310 4.9E-86 T 01-11-2018 D3790_09910 9a7e554446f12145fcb01adb27373409 760 Gene3D G3DSA:3.20.70.20 2 760 0.0 T 01-11-2018 D3790_09910 9a7e554446f12145fcb01adb27373409 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 01-11-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site D3790_09910 9a7e554446f12145fcb01adb27373409 760 SUPERFAMILY SSF51998 6 759 2.81E-287 T 01-11-2018 D3790_09910 9a7e554446f12145fcb01adb27373409 760 Pfam PF01228 Glycine radical 630 741 1.0E-42 T 01-11-2018 IPR001150 Glycine radical domain GO:0003824 D3790_09910 9a7e554446f12145fcb01adb27373409 760 PIRSF PIRSF000379 9 760 0.0 T 01-11-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 D3790_09910 9a7e554446f12145fcb01adb27373409 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 760 0.0 T 01-11-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 D3790_09910 9a7e554446f12145fcb01adb27373409 760 Pfam PF02901 Pyruvate formate lyase-like 23 614 9.8E-204 T 01-11-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 D3790_10980 0c73a1c6f6fbe8a9f8689817c90ed52d 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 491 9.9E-163 T 01-11-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 D3790_10980 0c73a1c6f6fbe8a9f8689817c90ed52d 495 SUPERFAMILY SSF63418 5 104 3.4E-25 T 01-11-2018 IPR035911 MurE/MurF, N-terminal D3790_10980 0c73a1c6f6fbe8a9f8689817c90ed52d 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 34.015 T 01-11-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 D3790_10980 0c73a1c6f6fbe8a9f8689817c90ed52d 495 Gene3D G3DSA:3.40.1390.10 2 104 1.6E-33 T 01-11-2018 D3790_10980 0c73a1c6f6fbe8a9f8689817c90ed52d 495 SUPERFAMILY SSF53244 339 491 1.11E-46 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D3790_10980 0c73a1c6f6fbe8a9f8689817c90ed52d 495 Gene3D G3DSA:3.40.1190.10 105 342 4.4E-84 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D3790_10980 0c73a1c6f6fbe8a9f8689817c90ed52d 495 Gene3D G3DSA:3.90.190.20 346 494 6.0E-52 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D3790_10980 0c73a1c6f6fbe8a9f8689817c90ed52d 495 Pfam PF08245 Mur ligase middle domain 114 318 2.2E-48 T 01-11-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 D3790_10980 0c73a1c6f6fbe8a9f8689817c90ed52d 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 423 2.1E-22 T 01-11-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 D3790_10980 0c73a1c6f6fbe8a9f8689817c90ed52d 495 SUPERFAMILY SSF53623 105 337 1.7E-74 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D3790_10980 0c73a1c6f6fbe8a9f8689817c90ed52d 495 Pfam PF01225 Mur ligase family, catalytic domain 25 102 1.8E-12 T 01-11-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 D3790_17405 31155af4202832f106774e77bbb52dd6 402 Pfam PF00872 Transposase, Mutator family 9 377 2.2E-113 T 01-11-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 D3790_17405 31155af4202832f106774e77bbb52dd6 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 01-11-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 D3790_14430 dd9f7dc52c0676a9c06ae5986d61298a 403 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 01-11-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D3790_14430 dd9f7dc52c0676a9c06ae5986d61298a 403 Gene3D G3DSA:1.20.5.470 368 402 7.6E-8 T 01-11-2018 D3790_14430 dd9f7dc52c0676a9c06ae5986d61298a 403 SUPERFAMILY SSF52402 6 171 2.96E-44 T 01-11-2018 D3790_14430 dd9f7dc52c0676a9c06ae5986d61298a 403 Hamap MF_00005 Argininosuccinate synthase [argG]. 5 402 50.526 T 01-11-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D3790_14430 dd9f7dc52c0676a9c06ae5986d61298a 403 SUPERFAMILY SSF69864 176 402 4.32E-87 T 01-11-2018 D3790_14430 dd9f7dc52c0676a9c06ae5986d61298a 403 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 11 19 - T 01-11-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D3790_14430 dd9f7dc52c0676a9c06ae5986d61298a 403 Gene3D G3DSA:3.40.50.620 8 177 1.7E-140 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_14430 dd9f7dc52c0676a9c06ae5986d61298a 403 Gene3D G3DSA:3.90.1260.10 68 356 1.7E-140 T 01-11-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D3790_14430 dd9f7dc52c0676a9c06ae5986d61298a 403 Pfam PF00764 Arginosuccinate synthase 9 396 1.2E-141 T 01-11-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D3790_14430 dd9f7dc52c0676a9c06ae5986d61298a 403 TIGRFAM TIGR00032 argG: argininosuccinate synthase 7 395 1.8E-132 T 01-11-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D3790_12820 4863f843c06082d04bcdcefa18cef4f4 1075 Pfam PF07993 Male sterility protein 699 933 2.5E-64 T 01-11-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 D3790_12820 4863f843c06082d04bcdcefa18cef4f4 1075 Pfam PF00550 Phosphopantetheine attachment site 577 638 3.2E-8 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_12820 4863f843c06082d04bcdcefa18cef4f4 1075 SUPERFAMILY SSF51735 691 970 8.68E-45 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_12820 4863f843c06082d04bcdcefa18cef4f4 1075 Gene3D G3DSA:3.40.50.720 669 1064 1.2E-98 T 01-11-2018 D3790_12820 4863f843c06082d04bcdcefa18cef4f4 1075 Pfam PF00501 AMP-binding enzyme 74 463 2.6E-86 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_12820 4863f843c06082d04bcdcefa18cef4f4 1075 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 696 1061 6.6E-108 T 01-11-2018 IPR010080 Thioester reductase-like domain D3790_12820 4863f843c06082d04bcdcefa18cef4f4 1075 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 91 486 9.9E-104 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_12820 4863f843c06082d04bcdcefa18cef4f4 1075 SUPERFAMILY SSF56801 28 586 1.57E-120 T 01-11-2018 D3790_12820 4863f843c06082d04bcdcefa18cef4f4 1075 ProSitePatterns PS00012 Phosphopantetheine attachment site. 599 614 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_12820 4863f843c06082d04bcdcefa18cef4f4 1075 Gene3D G3DSA:3.40.50.12780 60 457 3.7E-97 T 01-11-2018 D3790_12820 4863f843c06082d04bcdcefa18cef4f4 1075 SUPERFAMILY SSF47336 568 641 4.06E-14 T 01-11-2018 IPR036736 ACP-like superfamily D3790_12820 4863f843c06082d04bcdcefa18cef4f4 1075 Gene3D G3DSA:3.40.50.1820 566 662 5.2E-21 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_12820 4863f843c06082d04bcdcefa18cef4f4 1075 Gene3D G3DSA:3.30.300.30 458 565 5.5E-21 T 01-11-2018 D3790_12820 4863f843c06082d04bcdcefa18cef4f4 1075 ProSitePatterns PS00455 Putative AMP-binding domain signature. 214 225 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_12785 40f490570d5a85c2257579572756377c 781 SUPERFAMILY SSF55008 89 152 1.7E-15 T 01-11-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 D3790_12785 40f490570d5a85c2257579572756377c 781 Gene3D G3DSA:2.70.150.20 275 380 3.7E-32 T 01-11-2018 D3790_12785 40f490570d5a85c2257579572756377c 781 SUPERFAMILY SSF81665 228 760 1.01E-16 T 01-11-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 D3790_12785 40f490570d5a85c2257579572756377c 781 SUPERFAMILY SSF56784 474 771 1.15E-52 T 01-11-2018 IPR036412 HAD-like superfamily D3790_12785 40f490570d5a85c2257579572756377c 781 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 225 774 1.5E-178 T 01-11-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 D3790_12785 40f490570d5a85c2257579572756377c 781 Pfam PF00122 E1-E2 ATPase 276 455 2.4E-47 T 01-11-2018 D3790_12785 40f490570d5a85c2257579572756377c 781 Gene3D G3DSA:3.30.70.100 87 157 3.8E-18 T 01-11-2018 D3790_12785 40f490570d5a85c2257579572756377c 781 ProSitePatterns PS01047 Heavy-metal-associated domain. 94 123 - T 01-11-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 D3790_12785 40f490570d5a85c2257579572756377c 781 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 478 484 - T 01-11-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 D3790_12785 40f490570d5a85c2257579572756377c 781 SUPERFAMILY SSF81653 278 375 1.7E-21 T 01-11-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 D3790_12785 40f490570d5a85c2257579572756377c 781 Pfam PF00702 haloacid dehalogenase-like hydrolase 472 685 4.2E-38 T 01-11-2018 D3790_12785 40f490570d5a85c2257579572756377c 781 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 621 631 4.0E-29 T 01-11-2018 D3790_12785 40f490570d5a85c2257579572756377c 781 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 599 610 4.0E-29 T 01-11-2018 D3790_12785 40f490570d5a85c2257579572756377c 781 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 325 339 4.0E-29 T 01-11-2018 D3790_12785 40f490570d5a85c2257579572756377c 781 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 476 490 4.0E-29 T 01-11-2018 D3790_12785 40f490570d5a85c2257579572756377c 781 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 672 691 4.0E-29 T 01-11-2018 D3790_12785 40f490570d5a85c2257579572756377c 781 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 695 707 4.0E-29 T 01-11-2018 D3790_12785 40f490570d5a85c2257579572756377c 781 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 757 768 - T 01-11-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 D3790_12785 40f490570d5a85c2257579572756377c 781 ProSitePatterns PS01229 Hypothetical cof family signature 2. 672 694 - T 01-11-2018 D3790_12785 40f490570d5a85c2257579572756377c 781 Gene3D G3DSA:3.40.1110.10 487 606 1.5E-82 T 01-11-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 D3790_12785 40f490570d5a85c2257579572756377c 781 Gene3D G3DSA:3.40.50.1000 457 724 1.5E-82 T 01-11-2018 IPR023214 HAD superfamily D3790_12785 40f490570d5a85c2257579572756377c 781 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 225 547 1.9E-94 T 01-11-2018 D3790_12785 40f490570d5a85c2257579572756377c 781 Pfam PF00403 Heavy-metal-associated domain 94 150 5.3E-13 T 01-11-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 D3790_12785 40f490570d5a85c2257579572756377c 781 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 672 688 3.4E-6 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 D3790_12785 40f490570d5a85c2257579572756377c 781 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 645 661 3.4E-6 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 D3790_12785 40f490570d5a85c2257579572756377c 781 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 703 728 3.4E-6 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 D3790_12785 40f490570d5a85c2257579572756377c 781 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 249 753 2.9E-83 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 D3790_12185 20224c335391a8526eb3ec7b49507c67 210 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 5 204 6.0E-42 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 D3790_12185 20224c335391a8526eb3ec7b49507c67 210 SUPERFAMILY SSF56529 2 203 3.92E-49 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 D3790_12185 20224c335391a8526eb3ec7b49507c67 210 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 3 203 4.6E-76 T 01-11-2018 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68 D3790_12185 20224c335391a8526eb3ec7b49507c67 210 Gene3D G3DSA:3.90.850.10 1 206 1.9E-53 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 D3790_01865 36d91e992065efac17067b847b31d2d2 654 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 15 649 3.3E-282 T 01-11-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 D3790_01865 36d91e992065efac17067b847b31d2d2 654 SUPERFAMILY SSF52467 192 394 1.09E-41 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily D3790_01865 36d91e992065efac17067b847b31d2d2 654 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 229 362 2.8E-32 T 01-11-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 D3790_01865 36d91e992065efac17067b847b31d2d2 654 SUPERFAMILY SSF52518 10 218 6.82E-32 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_01865 36d91e992065efac17067b847b31d2d2 654 Gene3D G3DSA:3.40.50.1220 222 407 1.7E-37 T 01-11-2018 D3790_01865 36d91e992065efac17067b847b31d2d2 654 Gene3D G3DSA:3.40.50.970 422 621 3.4E-47 T 01-11-2018 D3790_01865 36d91e992065efac17067b847b31d2d2 654 SUPERFAMILY SSF52518 426 635 2.5E-52 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_01865 36d91e992065efac17067b847b31d2d2 654 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 449 608 2.0E-39 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 D3790_01865 36d91e992065efac17067b847b31d2d2 654 Gene3D G3DSA:3.40.50.970 10 211 2.3E-32 T 01-11-2018 D3790_01865 36d91e992065efac17067b847b31d2d2 654 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 485 504 - T 01-11-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 D3790_01865 36d91e992065efac17067b847b31d2d2 654 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 16 203 4.9E-30 T 01-11-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 D3790_14760 a278e85d06b8b52178eacd61181bf09a 392 Gene3D G3DSA:3.40.50.2000 209 379 8.5E-30 T 01-11-2018 D3790_14760 a278e85d06b8b52178eacd61181bf09a 392 Pfam PF13692 Glycosyl transferases group 1 212 353 1.2E-21 T 01-11-2018 D3790_14760 a278e85d06b8b52178eacd61181bf09a 392 Gene3D G3DSA:3.40.50.2000 1 205 1.5E-13 T 01-11-2018 D3790_14760 a278e85d06b8b52178eacd61181bf09a 392 Pfam PF13439 Glycosyltransferase Family 4 25 189 2.3E-13 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D3790_14760 a278e85d06b8b52178eacd61181bf09a 392 SUPERFAMILY SSF53756 2 386 1.73E-48 T 01-11-2018 D3790_07635 495e553aa047a49c4fca67fdb6d691d7 291 SUPERFAMILY SSF55060 165 281 6.26E-35 T 01-11-2018 IPR036554 GHMP kinase, C-terminal domain superfamily D3790_07635 495e553aa047a49c4fca67fdb6d691d7 291 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 275 32.118 T 01-11-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 D3790_07635 495e553aa047a49c4fca67fdb6d691d7 291 PIRSF PIRSF010376 1 283 2.6E-84 T 01-11-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 D3790_07635 495e553aa047a49c4fca67fdb6d691d7 291 Gene3D G3DSA:3.30.70.890 165 282 6.6E-28 T 01-11-2018 IPR036554 GHMP kinase, C-terminal domain superfamily D3790_07635 495e553aa047a49c4fca67fdb6d691d7 291 Gene3D G3DSA:3.30.230.10 2 163 3.0E-54 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3790_07635 495e553aa047a49c4fca67fdb6d691d7 291 Pfam PF00288 GHMP kinases N terminal domain 91 148 2.5E-10 T 01-11-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 D3790_07635 495e553aa047a49c4fca67fdb6d691d7 291 SUPERFAMILY SSF54211 1 162 9.87E-48 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_07635 495e553aa047a49c4fca67fdb6d691d7 291 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 1 280 9.3E-104 T 01-11-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 D3790_19340 2bacb62a8a8b246dfd41990613c0a281 895 Gene3D G3DSA:3.10.20.410 81 204 2.8E-16 T 01-11-2018 D3790_19340 2bacb62a8a8b246dfd41990613c0a281 895 Gene3D G3DSA:2.60.40.2610 718 808 3.6E-12 T 01-11-2018 D3790_19340 2bacb62a8a8b246dfd41990613c0a281 895 SUPERFAMILY SSF141729 82 203 3.92E-28 T 01-11-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 D3790_19340 2bacb62a8a8b246dfd41990613c0a281 895 Pfam PF00577 Outer membrane usher protein 245 803 1.5E-184 T 01-11-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 D3790_19340 2bacb62a8a8b246dfd41990613c0a281 895 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 369 379 - T 01-11-2018 IPR018030 Fimbrial membrane usher, conserved site D3790_19340 2bacb62a8a8b246dfd41990613c0a281 895 Gene3D G3DSA:2.60.40.2070 812 889 5.0E-27 T 01-11-2018 D3790_19340 2bacb62a8a8b246dfd41990613c0a281 895 Gene3D G3DSA:2.60.40.3110 327 415 1.5E-28 T 01-11-2018 D3790_19340 2bacb62a8a8b246dfd41990613c0a281 895 Pfam PF13953 PapC C-terminal domain 814 869 2.0E-13 T 01-11-2018 IPR025949 PapC-like, C-terminal domain D3790_19340 2bacb62a8a8b246dfd41990613c0a281 895 Pfam PF13954 PapC N-terminal domain 83 229 1.1E-33 T 01-11-2018 IPR025885 PapC, N-terminal domain GO:0005515 D3790_01855 25ae39304d9a962abe862c2fb85222e1 277 SUPERFAMILY SSF46689 9 85 1.34E-18 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_01855 25ae39304d9a962abe862c2fb85222e1 277 Pfam PF01380 SIS domain 141 267 2.5E-23 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 D3790_01855 25ae39304d9a962abe862c2fb85222e1 277 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 75 2.8E-11 T 01-11-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 D3790_01855 25ae39304d9a962abe862c2fb85222e1 277 SUPERFAMILY SSF53697 108 274 1.05E-28 T 01-11-2018 D3790_01855 25ae39304d9a962abe862c2fb85222e1 277 Gene3D G3DSA:3.40.50.10490 108 277 7.0E-35 T 01-11-2018 D3790_01855 25ae39304d9a962abe862c2fb85222e1 277 Gene3D G3DSA:1.10.10.10 5 83 2.2E-16 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_14135 84e1c3564b57135393ad25d195bad9bf 206 SUPERFAMILY SSF55174 3 206 2.49E-73 T 01-11-2018 D3790_14135 84e1c3564b57135393ad25d195bad9bf 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 01-11-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14135 84e1c3564b57135393ad25d195bad9bf 206 Gene3D G3DSA:3.10.290.10 103 191 1.1E-36 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D3790_14135 84e1c3564b57135393ad25d195bad9bf 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.321 T 01-11-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 D3790_14135 84e1c3564b57135393ad25d195bad9bf 206 Pfam PF01479 S4 domain 97 143 3.0E-18 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14135 84e1c3564b57135393ad25d195bad9bf 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 4.8E-86 T 01-11-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 D3790_14135 84e1c3564b57135393ad25d195bad9bf 206 SMART SM00363 96 160 8.6E-20 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14135 84e1c3564b57135393ad25d195bad9bf 206 Gene3D G3DSA:1.10.1050.10 1 102 3.7E-46 T 01-11-2018 D3790_14135 84e1c3564b57135393ad25d195bad9bf 206 SMART SM01390 3 95 1.2E-48 T 01-11-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 D3790_14135 84e1c3564b57135393ad25d195bad9bf 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 3.8E-32 T 01-11-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 D3790_10640 dcb836a76fd07dde35de843d72c6008d 333 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 190 256 1.8E-22 T 01-11-2018 IPR017703 YgfZ/GcvT conserved site D3790_10640 dcb836a76fd07dde35de843d72c6008d 333 Gene3D G3DSA:3.30.70.1400 28 114 3.8E-57 T 01-11-2018 D3790_10640 dcb836a76fd07dde35de843d72c6008d 333 SUPERFAMILY SSF101790 248 330 7.85E-26 T 01-11-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal D3790_10640 dcb836a76fd07dde35de843d72c6008d 333 Pfam PF01571 Aminomethyltransferase folate-binding domain 31 136 1.1E-7 T 01-11-2018 IPR006222 Aminomethyltransferase, folate-binding domain D3790_10640 dcb836a76fd07dde35de843d72c6008d 333 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 326 46.511 T 01-11-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 D3790_10640 dcb836a76fd07dde35de843d72c6008d 333 SUPERFAMILY SSF103025 18 246 1.57E-60 T 01-11-2018 D3790_10640 dcb836a76fd07dde35de843d72c6008d 333 Gene3D G3DSA:2.40.30.160 200 323 1.6E-41 T 01-11-2018 D3790_10640 dcb836a76fd07dde35de843d72c6008d 333 Gene3D G3DSA:3.30.70.1630 25 197 3.8E-57 T 01-11-2018 D3790_10640 dcb836a76fd07dde35de843d72c6008d 333 PIRSF PIRSF006487 20 333 9.2E-11 T 01-11-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 D3790_07385 c1b08e8bad73cd148297e9e7c0af43d9 1102 ProSitePatterns PS00455 Putative AMP-binding domain signature. 647 658 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07385 c1b08e8bad73cd148297e9e7c0af43d9 1102 SMART SM00823 Phosphopantetheine attachment site 1032 1101 0.007 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_07385 c1b08e8bad73cd148297e9e7c0af43d9 1102 Pfam PF13193 AMP-binding enzyme C-terminal domain 924 1001 2.6E-7 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_07385 c1b08e8bad73cd148297e9e7c0af43d9 1102 Pfam PF00501 AMP-binding enzyme 478 916 1.9E-61 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07385 c1b08e8bad73cd148297e9e7c0af43d9 1102 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1056 1071 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_07385 c1b08e8bad73cd148297e9e7c0af43d9 1102 Gene3D G3DSA:3.30.559.30 201 444 1.1E-89 T 01-11-2018 D3790_07385 c1b08e8bad73cd148297e9e7c0af43d9 1102 SUPERFAMILY SSF47336 1029 1098 2.75E-12 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07385 c1b08e8bad73cd148297e9e7c0af43d9 1102 SUPERFAMILY SSF52777 206 449 2.22E-43 T 01-11-2018 D3790_07385 c1b08e8bad73cd148297e9e7c0af43d9 1102 Gene3D G3DSA:1.10.1200.10 1018 1102 2.8E-15 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07385 c1b08e8bad73cd148297e9e7c0af43d9 1102 Pfam PF00550 Phosphopantetheine attachment site 1034 1097 5.2E-13 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07385 c1b08e8bad73cd148297e9e7c0af43d9 1102 SUPERFAMILY SSF52777 20 197 3.34E-32 T 01-11-2018 D3790_07385 c1b08e8bad73cd148297e9e7c0af43d9 1102 Gene3D G3DSA:3.30.559.10 19 389 1.1E-89 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07385 c1b08e8bad73cd148297e9e7c0af43d9 1102 Gene3D G3DSA:3.40.50.12780 464 910 2.2E-79 T 01-11-2018 D3790_07385 c1b08e8bad73cd148297e9e7c0af43d9 1102 Pfam PF00668 Condensation domain 15 457 6.1E-63 T 01-11-2018 IPR001242 Condensation domain D3790_07385 c1b08e8bad73cd148297e9e7c0af43d9 1102 Gene3D G3DSA:3.30.300.30 911 1012 1.9E-26 T 01-11-2018 D3790_07385 c1b08e8bad73cd148297e9e7c0af43d9 1102 SUPERFAMILY SSF56801 445 1014 2.62E-99 T 01-11-2018 D3790_17430 db03a42626a5fefca95af5a1ac93488a 447 SUPERFAMILY SSF111283 14 446 5.49E-130 T 01-11-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 D3790_17430 db03a42626a5fefca95af5a1ac93488a 447 Gene3D G3DSA:3.30.2290.10 8 232 2.5E-93 T 01-11-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal D3790_17430 db03a42626a5fefca95af5a1ac93488a 447 Pfam PF01523 Putative modulator of DNA gyrase 33 324 1.1E-61 T 01-11-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 D3790_15520 293abc0e2335d9b41e57b2a30d074a1c 482 Gene3D G3DSA:3.50.50.60 1 154 4.1E-34 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_15520 293abc0e2335d9b41e57b2a30d074a1c 482 SUPERFAMILY SSF51905 149 343 6.6E-28 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_15520 293abc0e2335d9b41e57b2a30d074a1c 482 Pfam PF00743 Flavin-binding monooxygenase-like 8 373 1.1E-16 T 01-11-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 D3790_15520 293abc0e2335d9b41e57b2a30d074a1c 482 SUPERFAMILY SSF51905 1 214 5.92E-46 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_15520 293abc0e2335d9b41e57b2a30d074a1c 482 Gene3D G3DSA:3.50.50.60 155 242 5.5E-14 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_15520 293abc0e2335d9b41e57b2a30d074a1c 482 Gene3D G3DSA:3.50.50.60 311 442 6.1E-7 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_18900 05ab4e4a88bb13b771ce3b74409182e7 816 Gene3D G3DSA:2.30.120.10 310 383 2.4E-208 T 01-11-2018 D3790_18900 05ab4e4a88bb13b771ce3b74409182e7 816 Gene3D G3DSA:1.10.439.10 31 206 9.4E-66 T 01-11-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 D3790_18900 05ab4e4a88bb13b771ce3b74409182e7 816 Pfam PF01804 Penicillin amidase 40 803 4.1E-125 T 01-11-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 D3790_18900 05ab4e4a88bb13b771ce3b74409182e7 816 SUPERFAMILY SSF56235 36 813 5.14E-145 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D3790_18900 05ab4e4a88bb13b771ce3b74409182e7 816 Gene3D G3DSA:1.10.1400.10 531 740 2.4E-208 T 01-11-2018 D3790_18900 05ab4e4a88bb13b771ce3b74409182e7 816 Gene3D G3DSA:3.60.20.10 235 803 2.4E-208 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D3790_02390 ff249cf30ec72e3797e489d05dca3dce 142 Pfam PF14581 SseB protein C-terminal domain 15 127 1.3E-33 T 01-11-2018 IPR027945 SseB protein, C-terminal D3790_15445 e8826b25e099207ba70b98e51288ee8c 78 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 4.3E-31 T 01-11-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 D3790_15445 e8826b25e099207ba70b98e51288ee8c 78 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.4E-8 T 01-11-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15445 e8826b25e099207ba70b98e51288ee8c 78 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.4E-8 T 01-11-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15445 e8826b25e099207ba70b98e51288ee8c 78 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.4E-8 T 01-11-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15445 e8826b25e099207ba70b98e51288ee8c 78 Pfam PF00137 ATP synthase subunit C 10 72 7.2E-9 T 01-11-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 D3790_15445 e8826b25e099207ba70b98e51288ee8c 78 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 01-11-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15445 e8826b25e099207ba70b98e51288ee8c 78 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 14.529 T 01-11-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15445 e8826b25e099207ba70b98e51288ee8c 78 Gene3D G3DSA:1.20.20.10 1 78 2.3E-32 T 01-11-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15445 e8826b25e099207ba70b98e51288ee8c 78 SUPERFAMILY SSF81333 3 76 4.32E-18 T 01-11-2018 IPR035921 F/V-ATP synthase subunit C superfamily D3790_03810 67706ad2ad92ce47fae3f4f26bc58fb7 230 Gene3D G3DSA:1.10.3720.10 2 224 2.5E-61 T 01-11-2018 IPR035906 MetI-like superfamily D3790_03810 67706ad2ad92ce47fae3f4f26bc58fb7 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 219 1.4E-21 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_03810 67706ad2ad92ce47fae3f4f26bc58fb7 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 11 220 3.7E-73 T 01-11-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 D3790_03810 67706ad2ad92ce47fae3f4f26bc58fb7 230 SUPERFAMILY SSF161098 5 219 1.7E-50 T 01-11-2018 IPR035906 MetI-like superfamily D3790_13140 ce831e746979e979502968e9ea1bc778 141 PIRSF PIRSF018193 1 141 1.2E-61 T 01-11-2018 IPR016716 Regulator of ribonuclease activity B D3790_13140 ce831e746979e979502968e9ea1bc778 141 Pfam PF06877 Regulator of ribonuclease activity B 12 113 3.5E-34 T 01-11-2018 IPR009671 Regulator of ribonuclease activity B domain D3790_13140 ce831e746979e979502968e9ea1bc778 141 SUPERFAMILY SSF89946 3 123 3.27E-41 T 01-11-2018 IPR036701 RraB-like superfamily D3790_13140 ce831e746979e979502968e9ea1bc778 141 Gene3D G3DSA:3.30.70.970 1 125 2.2E-50 T 01-11-2018 IPR036701 RraB-like superfamily D3790_13140 ce831e746979e979502968e9ea1bc778 141 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 30.079 T 01-11-2018 IPR016716 Regulator of ribonuclease activity B D3790_19280 046601f239c88636607b3e0c82a5ef5b 340 Pfam PF01548 Transposase 5 140 2.1E-11 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D3790_19280 046601f239c88636607b3e0c82a5ef5b 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 289 1.1E-20 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D3790_02720 79d784ff45b7be698fa51a2e2d629cde 158 SUPERFAMILY SSF49772 24 156 1.15E-54 T 01-11-2018 IPR036198 Ecotin superfamily D3790_02720 79d784ff45b7be698fa51a2e2d629cde 158 Gene3D G3DSA:2.60.40.550 19 100 2.5E-33 T 01-11-2018 D3790_02720 79d784ff45b7be698fa51a2e2d629cde 158 Pfam PF03974 Ecotin 26 148 2.5E-50 T 01-11-2018 IPR005658 Proteinase inhibitor I11, ecotin D3790_02720 79d784ff45b7be698fa51a2e2d629cde 158 PIRSF PIRSF006865 1 158 1.1E-58 T 01-11-2018 IPR005658 Proteinase inhibitor I11, ecotin D3790_02720 79d784ff45b7be698fa51a2e2d629cde 158 Gene3D G3DSA:4.10.1230.10 101 158 1.2E-24 T 01-11-2018 IPR027438 Ecotin, C-terminal D3790_01035 2e1d8d8325da6690409e9c5447335b4b 447 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 257 7.7E-116 T 01-11-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 D3790_01035 2e1d8d8325da6690409e9c5447335b4b 447 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 3.0E-185 T 01-11-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 D3790_01035 2e1d8d8325da6690409e9c5447335b4b 447 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 447 46.522 T 01-11-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 D3790_01035 2e1d8d8325da6690409e9c5447335b4b 447 Pfam PF11973 NQRA C-terminal domain 262 310 4.2E-22 T 01-11-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Gene3D G3DSA:1.20.140.180 2944 3084 4.2E-51 T 01-11-2018 D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 SUPERFAMILY SSF159501 3211 3433 1.44E-70 T 01-11-2018 D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Gene3D G3DSA:3.40.50.11050 3828 4043 6.8E-83 T 01-11-2018 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 SUPERFAMILY SSF49785 1465 1603 5.61E-5 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Gene3D G3DSA:1.20.58.1190 2399 2489 6.6E-18 T 01-11-2018 D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF11713 Peptidase C80 family 3862 4019 4.6E-48 T 01-11-2018 IPR020974 CGT/MARTX, cysteine protease (CPD) domain D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 SUPERFAMILY SSF158842 2389 2631 3.79E-39 T 01-11-2018 D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Gene3D G3DSA:2.60.120.260 1462 1606 3.0E-9 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 SUPERFAMILY SSF158842 2939 3209 4.71E-89 T 01-11-2018 D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Gene3D G3DSA:2.160.20.160 4537 4825 3.3E-18 T 01-11-2018 D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Gene3D G3DSA:3.40.50.11550 3187 3441 1.7E-93 T 01-11-2018 D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 1187 1202 0.73 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 1318 1335 4.5 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 994 1010 0.65 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 121 138 0.0039 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 785 798 1.2 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 582 598 1.2 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 922 935 6.0 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 187 203 1.2 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 1034 1046 0.41 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 1147 1162 0.019 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 1015 1029 6.8 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 1204 1220 0.0029 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 255 272 3.5 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 207 224 0.13 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 823 838 0.1 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 759 774 4.0 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 899 913 0.33 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 1051 1063 32.0 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 1166 1183 0.06 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 161 184 4.7E-4 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 602 618 0.96 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 975 987 1.1 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 1261 1278 28.0 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 275 292 0.046 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 1074 1085 25.0 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 1223 1239 10.0 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 622 638 0.018 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 1128 1144 3.5 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 880 894 1.2 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 642 659 0.085 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 1299 1316 0.21 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 662 675 1.5 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 956 971 19.0 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 141 157 0.025 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 1091 1105 1.5 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 844 858 1.5 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF07634 RtxA repeat 719 733 1.2 T 01-11-2018 IPR011509 RtxA toxin D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF11647 Membrane Localization Domain 2950 3013 1.1E-23 T 01-11-2018 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 Pfam PF11647 Membrane Localization Domain 2404 2473 7.0E-27 T 01-11-2018 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain D3790_03540 6ec5e8674340b194fbb5ae9fef7405b2 4944 SUPERFAMILY SSF51120 4666 4872 1.29E-14 T 01-11-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 Pfam PF00873 AcrB/AcrD/AcrF family 4 1010 0.0 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 SUPERFAMILY SSF82866 813 1011 3.53E-41 T 01-11-2018 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 Gene3D G3DSA:3.30.2090.10 703 791 7.6E-293 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 Gene3D G3DSA:1.20.1640.10 503 1007 7.6E-293 T 01-11-2018 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 Gene3D G3DSA:1.20.1640.10 10 502 7.6E-293 T 01-11-2018 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1028 24.958 T 01-11-2018 IPR023931 Multidrug resistance protein MdtC D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 3.5E-84 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 3.5E-84 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.5E-84 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.5E-84 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.5E-84 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.5E-84 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.5E-84 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.5E-84 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.5E-84 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 SUPERFAMILY SSF82693 555 649 8.37E-15 T 01-11-2018 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 SUPERFAMILY SSF82714 706 787 5.62E-16 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 SUPERFAMILY SSF82693 136 324 1.74E-19 T 01-11-2018 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 Gene3D G3DSA:3.30.70.1320 135 326 7.6E-293 T 01-11-2018 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 Gene3D G3DSA:3.30.70.1430 557 649 7.6E-293 T 01-11-2018 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 SUPERFAMILY SSF82866 291 490 1.96E-46 T 01-11-2018 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 SUPERFAMILY SSF82693 658 834 2.04E-7 T 01-11-2018 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 Gene3D G3DSA:3.30.70.1440 650 849 7.6E-293 T 01-11-2018 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 Gene3D G3DSA:3.30.2090.10 179 269 7.6E-293 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 SUPERFAMILY SSF82693 40 134 8.02E-25 T 01-11-2018 D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 SUPERFAMILY SSF82714 183 266 7.19E-17 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3790_05385 47c80f69214c7cd10a3aca732641aa7c 1031 Gene3D G3DSA:3.30.70.1430 40 799 7.6E-293 T 01-11-2018 D3790_18735 e22c09b5c25ddc021057ac82840cc504 205 TIGRFAM TIGR00498 lexA: repressor LexA 1 201 2.3E-82 T 01-11-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 D3790_18735 e22c09b5c25ddc021057ac82840cc504 205 Gene3D G3DSA:1.10.10.10 1 70 1.4E-29 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_18735 e22c09b5c25ddc021057ac82840cc504 205 SUPERFAMILY SSF46785 3 69 1.01E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_18735 e22c09b5c25ddc021057ac82840cc504 205 Hamap MF_00015 LexA repressor [lexA]. 3 202 31.599 T 01-11-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 D3790_18735 e22c09b5c25ddc021057ac82840cc504 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 114 124 4.9E-13 T 01-11-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 D3790_18735 e22c09b5c25ddc021057ac82840cc504 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 136 4.9E-13 T 01-11-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 D3790_18735 e22c09b5c25ddc021057ac82840cc504 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 153 165 4.9E-13 T 01-11-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 D3790_18735 e22c09b5c25ddc021057ac82840cc504 205 Pfam PF00717 Peptidase S24-like 117 178 5.9E-14 T 01-11-2018 IPR015927 Peptidase S24/S26A/S26B/S26C D3790_18735 e22c09b5c25ddc021057ac82840cc504 205 Gene3D G3DSA:2.10.109.10 83 205 1.9E-44 T 01-11-2018 D3790_18735 e22c09b5c25ddc021057ac82840cc504 205 SUPERFAMILY SSF51306 79 200 1.43E-36 T 01-11-2018 IPR036286 LexA/Signal peptidase-like superfamily D3790_18735 e22c09b5c25ddc021057ac82840cc504 205 Pfam PF01726 LexA DNA binding domain 1 65 9.9E-29 T 01-11-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 D3790_18095 c384f28ac1dbc1996d5faa328f1c3ec6 269 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 55.633 T 01-11-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 D3790_18095 c384f28ac1dbc1996d5faa328f1c3ec6 269 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 264 2.0E-89 T 01-11-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 D3790_18095 c384f28ac1dbc1996d5faa328f1c3ec6 269 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 01-11-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 D3790_18095 c384f28ac1dbc1996d5faa328f1c3ec6 269 SUPERFAMILY SSF53335 17 266 1.03E-77 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_18095 c384f28ac1dbc1996d5faa328f1c3ec6 269 Gene3D G3DSA:1.10.8.100 201 268 1.2E-27 T 01-11-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 D3790_18095 c384f28ac1dbc1996d5faa328f1c3ec6 269 Gene3D G3DSA:3.40.50.150 1 200 2.1E-67 T 01-11-2018 D3790_18095 c384f28ac1dbc1996d5faa328f1c3ec6 269 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 5.3E-82 T 01-11-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm D3790_18095 c384f28ac1dbc1996d5faa328f1c3ec6 269 SMART SM00650 25 198 2.7E-81 T 01-11-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 D3790_06410 4a9b0dd07012a1cca586fe2d330c012e 332 Pfam PF00591 Glycosyl transferase family, a/b domain 73 322 3.1E-97 T 01-11-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 D3790_06410 4a9b0dd07012a1cca586fe2d330c012e 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 38.408 T 01-11-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 D3790_06410 4a9b0dd07012a1cca586fe2d330c012e 332 Gene3D G3DSA:1.20.970.10 11 183 1.3E-120 T 01-11-2018 D3790_06410 4a9b0dd07012a1cca586fe2d330c012e 332 Gene3D G3DSA:3.40.1030.10 67 321 1.3E-120 T 01-11-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 D3790_06410 4a9b0dd07012a1cca586fe2d330c012e 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 63 6.1E-14 T 01-11-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 D3790_06410 4a9b0dd07012a1cca586fe2d330c012e 332 SUPERFAMILY SSF47648 2 67 2.35E-15 T 01-11-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 D3790_06410 4a9b0dd07012a1cca586fe2d330c012e 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 329 2.4E-126 T 01-11-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 D3790_06410 4a9b0dd07012a1cca586fe2d330c012e 332 SUPERFAMILY SSF52418 70 328 4.45E-90 T 01-11-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 D3790_10800 1425fe0bd0f42cd46c492225a8d80a99 865 Gene3D G3DSA:3.30.499.10 402 529 4.0E-154 T 01-11-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 D3790_10800 1425fe0bd0f42cd46c492225a8d80a99 865 Gene3D G3DSA:3.30.499.10 683 865 1.0E-75 T 01-11-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 D3790_10800 1425fe0bd0f42cd46c492225a8d80a99 865 Gene3D G3DSA:3.20.19.10 162 361 2.2E-81 T 01-11-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 D3790_10800 1425fe0bd0f42cd46c492225a8d80a99 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 1.0E-40 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D3790_10800 1425fe0bd0f42cd46c492225a8d80a99 865 SUPERFAMILY SSF74778 2 160 7.45E-67 T 01-11-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 D3790_10800 1425fe0bd0f42cd46c492225a8d80a99 865 SUPERFAMILY SSF52016 162 371 2.16E-72 T 01-11-2018 D3790_10800 1425fe0bd0f42cd46c492225a8d80a99 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 5.6E-66 T 01-11-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 D3790_10800 1425fe0bd0f42cd46c492225a8d80a99 865 Gene3D G3DSA:1.25.40.310 1 161 2.1E-72 T 01-11-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 D3790_10800 1425fe0bd0f42cd46c492225a8d80a99 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 01-11-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 D3790_10800 1425fe0bd0f42cd46c492225a8d80a99 865 SUPERFAMILY SSF53732 380 860 1.96E-151 T 01-11-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 D3790_10800 1425fe0bd0f42cd46c492225a8d80a99 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 01-11-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 D3790_10800 1425fe0bd0f42cd46c492225a8d80a99 865 PIRSF PIRSF036687 1 859 0.0 T 01-11-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 D3790_10800 1425fe0bd0f42cd46c492225a8d80a99 865 Gene3D G3DSA:3.40.1060.10 385 681 4.0E-154 T 01-11-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 D3790_10800 1425fe0bd0f42cd46c492225a8d80a99 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 01-11-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 D3790_10800 1425fe0bd0f42cd46c492225a8d80a99 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.8E-98 T 01-11-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 D3790_07220 822f8ea88a2cb4d253ee654bb96adaf5 144 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 40.636 T 01-11-2018 IPR008228 Uncharacterised conserved protein UCP006173 D3790_07220 822f8ea88a2cb4d253ee654bb96adaf5 144 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 1.6E-8 T 01-11-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein D3790_07220 822f8ea88a2cb4d253ee654bb96adaf5 144 PIRSF PIRSF006173 1 144 1.4E-64 T 01-11-2018 IPR008228 Uncharacterised conserved protein UCP006173 D3790_14210 ba6b4508db291895e86bd9a03c1ded47 84 SUPERFAMILY SSF50249 5 82 3.0E-33 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_14210 ba6b4508db291895e86bd9a03c1ded47 84 Pfam PF00366 Ribosomal protein S17 10 76 3.7E-34 T 01-11-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14210 ba6b4508db291895e86bd9a03c1ded47 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.594 T 01-11-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14210 ba6b4508db291895e86bd9a03c1ded47 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 2.0E-35 T 01-11-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14210 ba6b4508db291895e86bd9a03c1ded47 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 01-11-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14210 ba6b4508db291895e86bd9a03c1ded47 84 Gene3D G3DSA:2.40.50.140 1 84 6.4E-40 T 01-11-2018 D3790_14210 ba6b4508db291895e86bd9a03c1ded47 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 5.3E-14 T 01-11-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14210 ba6b4508db291895e86bd9a03c1ded47 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 5.3E-14 T 01-11-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14210 ba6b4508db291895e86bd9a03c1ded47 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 5.3E-14 T 01-11-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14210 ba6b4508db291895e86bd9a03c1ded47 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 8.5E-39 T 01-11-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_00215 9a1bf7a57b8ae2bd4dc0a6edf1f04b1a 346 SUPERFAMILY SSF46689 17 137 1.24E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_00215 9a1bf7a57b8ae2bd4dc0a6edf1f04b1a 346 Gene3D G3DSA:3.30.420.470 143 331 3.9E-9 T 01-11-2018 D3790_00215 9a1bf7a57b8ae2bd4dc0a6edf1f04b1a 346 Pfam PF13384 Homeodomain-like domain 28 72 1.4E-10 T 01-11-2018 D3790_00215 9a1bf7a57b8ae2bd4dc0a6edf1f04b1a 346 Pfam PF13358 DDE superfamily endonuclease 177 310 1.4E-21 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_04410 f8d26fcdb1cbd21cd5a0cc2502fd8449 471 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 3 462 32.117 T 01-11-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 D3790_04410 f8d26fcdb1cbd21cd5a0cc2502fd8449 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 306 3.2E-120 T 01-11-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 D3790_04410 f8d26fcdb1cbd21cd5a0cc2502fd8449 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_04410 f8d26fcdb1cbd21cd5a0cc2502fd8449 471 SUPERFAMILY SSF48163 300 462 4.32E-42 T 01-11-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 D3790_04410 f8d26fcdb1cbd21cd5a0cc2502fd8449 471 Gene3D G3DSA:1.10.10.350 367 470 1.3E-21 T 01-11-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 D3790_04410 f8d26fcdb1cbd21cd5a0cc2502fd8449 471 SUPERFAMILY SSF52374 4 299 1.98E-112 T 01-11-2018 D3790_04410 f8d26fcdb1cbd21cd5a0cc2502fd8449 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 460 3.0E-202 T 01-11-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 D3790_04410 f8d26fcdb1cbd21cd5a0cc2502fd8449 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 3.9E-27 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D3790_04410 f8d26fcdb1cbd21cd5a0cc2502fd8449 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 190 3.9E-27 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D3790_04410 f8d26fcdb1cbd21cd5a0cc2502fd8449 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 3.9E-27 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D3790_04410 f8d26fcdb1cbd21cd5a0cc2502fd8449 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 204 3.9E-27 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D3790_04410 f8d26fcdb1cbd21cd5a0cc2502fd8449 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 3.9E-27 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D3790_04410 f8d26fcdb1cbd21cd5a0cc2502fd8449 471 Gene3D G3DSA:3.40.50.620 2 314 1.5E-136 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_04930 3c601c2318c35ac5846953c229452dc8 1079 Pfam PF00668 Condensation domain 10 457 6.8E-73 T 01-11-2018 IPR001242 Condensation domain D3790_04930 3c601c2318c35ac5846953c229452dc8 1079 ProSitePatterns PS00455 Putative AMP-binding domain signature. 625 636 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_04930 3c601c2318c35ac5846953c229452dc8 1079 Gene3D G3DSA:3.30.559.30 184 443 5.2E-89 T 01-11-2018 D3790_04930 3c601c2318c35ac5846953c229452dc8 1079 Pfam PF13193 AMP-binding enzyme C-terminal domain 891 966 8.8E-11 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_04930 3c601c2318c35ac5846953c229452dc8 1079 Pfam PF00501 AMP-binding enzyme 479 883 6.7E-112 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_04930 3c601c2318c35ac5846953c229452dc8 1079 Gene3D G3DSA:1.10.1200.10 983 1061 1.3E-23 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04930 3c601c2318c35ac5846953c229452dc8 1079 Pfam PF00550 Phosphopantetheine attachment site 994 1057 9.3E-13 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_04930 3c601c2318c35ac5846953c229452dc8 1079 SUPERFAMILY SSF47336 985 1058 5.37E-18 T 01-11-2018 IPR036736 ACP-like superfamily D3790_04930 3c601c2318c35ac5846953c229452dc8 1079 Gene3D G3DSA:3.30.300.30 877 982 5.3E-36 T 01-11-2018 D3790_04930 3c601c2318c35ac5846953c229452dc8 1079 Gene3D G3DSA:3.30.559.10 11 368 5.2E-89 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_04930 3c601c2318c35ac5846953c229452dc8 1079 SUPERFAMILY SSF52777 188 464 3.67E-43 T 01-11-2018 D3790_04930 3c601c2318c35ac5846953c229452dc8 1079 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 499 907 1.4E-137 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_04930 3c601c2318c35ac5846953c229452dc8 1079 SUPERFAMILY SSF52777 12 180 2.11E-31 T 01-11-2018 D3790_04930 3c601c2318c35ac5846953c229452dc8 1079 SUPERFAMILY SSF56801 435 1006 1.57E-169 T 01-11-2018 D3790_04930 3c601c2318c35ac5846953c229452dc8 1079 Gene3D G3DSA:3.40.50.12780 467 875 1.3E-144 T 01-11-2018 D3790_06960 8ca4f49f182d100be1b8db95829e74c7 179 Pfam PF11162 Protein of unknown function (DUF2946) 50 177 1.3E-16 T 01-11-2018 IPR021333 Protein of unknown function DUF2946 D3790_02305 a686e4fe36504feede481ea76ddf3aa2 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3790_02305 a686e4fe36504feede481ea76ddf3aa2 445 SMART SM00448 7 118 1.3E-32 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_02305 a686e4fe36504feede481ea76ddf3aa2 445 SUPERFAMILY SSF52540 137 379 5.54E-70 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_02305 a686e4fe36504feede481ea76ddf3aa2 445 Gene3D G3DSA:3.40.50.300 133 307 3.0E-63 T 01-11-2018 D3790_02305 a686e4fe36504feede481ea76ddf3aa2 445 SUPERFAMILY SSF52172 5 181 5.27E-43 T 01-11-2018 IPR011006 CheY-like superfamily D3790_02305 a686e4fe36504feede481ea76ddf3aa2 445 Gene3D G3DSA:3.40.50.2300 5 132 4.5E-37 T 01-11-2018 D3790_02305 a686e4fe36504feede481ea76ddf3aa2 445 SMART SM00382 157 300 2.9E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_02305 a686e4fe36504feede481ea76ddf3aa2 445 Pfam PF00072 Response regulator receiver domain 10 118 1.4E-30 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_02305 a686e4fe36504feede481ea76ddf3aa2 445 Pfam PF00158 Sigma-54 interaction domain 137 303 2.5E-71 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D3790_02305 a686e4fe36504feede481ea76ddf3aa2 445 Gene3D G3DSA:1.10.10.60 387 440 8.6E-9 T 01-11-2018 D3790_02305 a686e4fe36504feede481ea76ddf3aa2 445 SUPERFAMILY SSF46689 350 438 1.61E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_02305 a686e4fe36504feede481ea76ddf3aa2 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site D3790_02305 a686e4fe36504feede481ea76ddf3aa2 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3790_02305 a686e4fe36504feede481ea76ddf3aa2 445 Gene3D G3DSA:1.10.8.60 308 385 1.1E-21 T 01-11-2018 D3790_07195 b924b6a1a46a5aa238e806f7f2e751bd 258 Gene3D G3DSA:3.20.20.70 5 256 1.7E-81 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_07195 b924b6a1a46a5aa238e806f7f2e751bd 258 Pfam PF00977 Histidine biosynthesis protein 9 244 1.4E-57 T 01-11-2018 IPR006062 Histidine biosynthesis GO:0000105 D3790_07195 b924b6a1a46a5aa238e806f7f2e751bd 258 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 8 252 27.515 T 01-11-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 D3790_07195 b924b6a1a46a5aa238e806f7f2e751bd 258 SUPERFAMILY SSF51366 7 251 1.14E-55 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D3790_14495 8d95c8e369144f189f1d64debd59c201 811 PIRSF PIRSF000727 13 811 8.8E-286 T 01-11-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D3790_14495 8d95c8e369144f189f1d64debd59c201 811 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 466 601 2.9E-19 T 01-11-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 D3790_14495 8d95c8e369144f189f1d64debd59c201 811 SUPERFAMILY SSF53633 13 300 2.49E-60 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily D3790_14495 8d95c8e369144f189f1d64debd59c201 811 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 16 454 7.7E-68 T 01-11-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D3790_14495 8d95c8e369144f189f1d64debd59c201 811 ProSitePatterns PS00324 Aspartokinase signature. 15 23 - T 01-11-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D3790_14495 8d95c8e369144f189f1d64debd59c201 811 SUPERFAMILY SSF55347 609 792 1.05E-45 T 01-11-2018 D3790_14495 8d95c8e369144f189f1d64debd59c201 811 Gene3D G3DSA:3.30.2130.10 309 457 4.2E-6 T 01-11-2018 D3790_14495 8d95c8e369144f189f1d64debd59c201 811 SUPERFAMILY SSF51735 458 631 4.33E-29 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_14495 8d95c8e369144f189f1d64debd59c201 811 Gene3D G3DSA:3.40.50.720 461 807 6.2E-104 T 01-11-2018 D3790_14495 8d95c8e369144f189f1d64debd59c201 811 Gene3D G3DSA:3.40.1160.10 16 299 1.5E-74 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily D3790_14495 8d95c8e369144f189f1d64debd59c201 811 Gene3D G3DSA:1.20.120.1320 52 146 1.5E-74 T 01-11-2018 D3790_14495 8d95c8e369144f189f1d64debd59c201 811 Gene3D G3DSA:3.30.360.10 620 790 6.2E-104 T 01-11-2018 D3790_14495 8d95c8e369144f189f1d64debd59c201 811 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 655 677 - T 01-11-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 D3790_14495 8d95c8e369144f189f1d64debd59c201 811 Pfam PF00742 Homoserine dehydrogenase 614 804 3.1E-43 T 01-11-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 D3790_14495 8d95c8e369144f189f1d64debd59c201 811 Pfam PF00696 Amino acid kinase family 13 285 1.4E-42 T 01-11-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D3790_08925 153143054c6a1866967c1bc3e20b9940 380 PIRSF PIRSF000138 2 379 3.6E-125 T 01-11-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 D3790_08925 153143054c6a1866967c1bc3e20b9940 380 SUPERFAMILY SSF51395 7 375 1.47E-100 T 01-11-2018 D3790_08925 153143054c6a1866967c1bc3e20b9940 380 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 72.633 T 01-11-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 D3790_08925 153143054c6a1866967c1bc3e20b9940 380 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 01-11-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 D3790_08925 153143054c6a1866967c1bc3e20b9940 380 Gene3D G3DSA:3.20.20.70 2 380 2.0E-127 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_08925 153143054c6a1866967c1bc3e20b9940 380 Pfam PF01070 FMN-dependent dehydrogenase 13 375 8.1E-129 T 01-11-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 D3790_03135 3cc6adb7b58a498a999c8d764f149fce 527 SUPERFAMILY SSF53383 35 508 1.08E-123 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_03135 3cc6adb7b58a498a999c8d764f149fce 527 Gene3D G3DSA:3.40.640.10 135 388 2.6E-133 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_03135 3cc6adb7b58a498a999c8d764f149fce 527 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 86 444 7.3E-69 T 01-11-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 D3790_03135 3cc6adb7b58a498a999c8d764f149fce 527 Gene3D G3DSA:3.90.1150.170 80 506 2.6E-133 T 01-11-2018 D3790_03135 3cc6adb7b58a498a999c8d764f149fce 527 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 82 101 1.3E-6 T 01-11-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 D3790_03135 3cc6adb7b58a498a999c8d764f149fce 527 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 148 167 1.3E-6 T 01-11-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 D3790_03135 3cc6adb7b58a498a999c8d764f149fce 527 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 426 445 1.3E-6 T 01-11-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 D3790_03135 3cc6adb7b58a498a999c8d764f149fce 527 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 108 127 1.3E-6 T 01-11-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 D3790_03135 3cc6adb7b58a498a999c8d764f149fce 527 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 383 398 1.3E-6 T 01-11-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 D3790_01280 03a6c5f17c37394ad6fe441ba3702d90 343 SUPERFAMILY SSF46689 17 137 6.63E-15 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_01280 03a6c5f17c37394ad6fe441ba3702d90 343 Pfam PF13565 Homeodomain-like domain 57 136 1.6E-12 T 01-11-2018 D3790_01280 03a6c5f17c37394ad6fe441ba3702d90 343 Pfam PF13358 DDE superfamily endonuclease 177 309 3.5E-22 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_01280 03a6c5f17c37394ad6fe441ba3702d90 343 Gene3D G3DSA:3.30.420.470 143 326 2.1E-10 T 01-11-2018 D3790_14895 03a6c5f17c37394ad6fe441ba3702d90 343 SUPERFAMILY SSF46689 17 137 6.63E-15 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_14895 03a6c5f17c37394ad6fe441ba3702d90 343 Pfam PF13565 Homeodomain-like domain 57 136 1.6E-12 T 01-11-2018 D3790_14895 03a6c5f17c37394ad6fe441ba3702d90 343 Pfam PF13358 DDE superfamily endonuclease 177 309 3.5E-22 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_14895 03a6c5f17c37394ad6fe441ba3702d90 343 Gene3D G3DSA:3.30.420.470 143 326 2.1E-10 T 01-11-2018 D3790_08085 03a6c5f17c37394ad6fe441ba3702d90 343 SUPERFAMILY SSF46689 17 137 6.63E-15 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_08085 03a6c5f17c37394ad6fe441ba3702d90 343 Pfam PF13565 Homeodomain-like domain 57 136 1.6E-12 T 01-11-2018 D3790_08085 03a6c5f17c37394ad6fe441ba3702d90 343 Pfam PF13358 DDE superfamily endonuclease 177 309 3.5E-22 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_08085 03a6c5f17c37394ad6fe441ba3702d90 343 Gene3D G3DSA:3.30.420.470 143 326 2.1E-10 T 01-11-2018 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 324 1.6E-21 T 01-11-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 Pfam PF03725 3' exoribonuclease family, domain 2 464 531 9.4E-5 T 01-11-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 1.6E-14 T 01-11-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 SMART SM00316 624 694 7.7E-29 T 01-11-2018 IPR022967 RNA-binding domain, S1 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 SUPERFAMILY SSF55666 454 553 2.52E-27 T 01-11-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 695 0.0 T 01-11-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 Gene3D G3DSA:3.30.230.70 237 553 1.7E-110 T 01-11-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 Gene3D G3DSA:2.40.50.140 626 696 2.6E-30 T 01-11-2018 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 SUPERFAMILY SSF54211 4 144 1.06E-49 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 Pfam PF00013 KH domain 560 618 1.4E-8 T 01-11-2018 IPR004088 K Homology domain, type 1 GO:0003723 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 9.5E-19 T 01-11-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 Pfam PF01138 3' exoribonuclease family, domain 1 328 460 1.2E-21 T 01-11-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 SUPERFAMILY SSF54791 558 626 2.15E-17 T 01-11-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 Gene3D G3DSA:3.30.230.70 2 230 3.0E-79 T 01-11-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 Pfam PF00575 S1 RNA binding domain 623 694 8.6E-23 T 01-11-2018 IPR003029 S1 domain GO:0003676 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 SMART SM00322 556 621 2.9E-12 T 01-11-2018 IPR004087 K Homology domain GO:0003676 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 SUPERFAMILY SSF46915 226 329 2.22E-22 T 01-11-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 SUPERFAMILY SSF54211 305 496 1.77E-45 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 PIRSF PIRSF005499 2 712 8.0E-300 T 01-11-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 SUPERFAMILY SSF55666 145 235 1.96E-31 T 01-11-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 Gene3D G3DSA:3.30.1370.10 554 625 1.2E-19 T 01-11-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 SUPERFAMILY SSF50249 611 696 1.23E-23 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_13330 be828f9659bd6d52e50eb7ef1fd7369f 712 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 697 30.48 T 01-11-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 D3790_13985 b7eb8f0d7517a731d3718f05674bf21b 515 Gene3D G3DSA:3.40.50.1100 24 326 4.0E-130 T 01-11-2018 D3790_13985 b7eb8f0d7517a731d3718f05674bf21b 515 SUPERFAMILY SSF55021 335 425 7.02E-25 T 01-11-2018 D3790_13985 b7eb8f0d7517a731d3718f05674bf21b 515 Gene3D G3DSA:3.40.50.1100 60 156 4.0E-130 T 01-11-2018 D3790_13985 b7eb8f0d7517a731d3718f05674bf21b 515 SUPERFAMILY SSF55021 422 514 4.81E-24 T 01-11-2018 D3790_13985 b7eb8f0d7517a731d3718f05674bf21b 515 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 14 514 3.6E-251 T 01-11-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 D3790_13985 b7eb8f0d7517a731d3718f05674bf21b 515 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 52 65 - T 01-11-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 D3790_13985 b7eb8f0d7517a731d3718f05674bf21b 515 SUPERFAMILY SSF53686 16 362 1.44E-99 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D3790_13985 b7eb8f0d7517a731d3718f05674bf21b 515 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 28 315 1.7E-75 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D3790_13985 b7eb8f0d7517a731d3718f05674bf21b 515 Gene3D G3DSA:3.40.1020.10 337 515 5.4E-69 T 01-11-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 D3790_13985 b7eb8f0d7517a731d3718f05674bf21b 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 427 514 5.8E-25 T 01-11-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 D3790_13985 b7eb8f0d7517a731d3718f05674bf21b 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 328 421 2.0E-25 T 01-11-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 D3790_07970 9bba68fb41ee8969b41d3d2cdf46f600 125 Gene3D G3DSA:2.60.120.430 3 114 2.5E-33 T 01-11-2018 D3790_07970 9bba68fb41ee8969b41d3d2cdf46f600 125 Pfam PF07828 PA-IL-like protein 3 115 1.3E-41 T 01-11-2018 IPR012905 PA-IL-like D3790_07970 9bba68fb41ee8969b41d3d2cdf46f600 125 SUPERFAMILY SSF49785 3 114 2.38E-36 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily D3790_04625 bbf2d69f197ff9e46c275284dac9ee0e 467 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 32 455 7.0E-112 T 01-11-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 D3790_04625 bbf2d69f197ff9e46c275284dac9ee0e 467 Gene3D G3DSA:3.30.300.30 363 462 3.4E-11 T 01-11-2018 D3790_04625 bbf2d69f197ff9e46c275284dac9ee0e 467 Pfam PF00501 AMP-binding enzyme 15 365 1.8E-48 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_04625 bbf2d69f197ff9e46c275284dac9ee0e 467 Gene3D G3DSA:3.40.50.12780 8 362 7.0E-63 T 01-11-2018 D3790_04625 bbf2d69f197ff9e46c275284dac9ee0e 467 SUPERFAMILY SSF56801 11 461 4.97E-86 T 01-11-2018 D3790_04625 bbf2d69f197ff9e46c275284dac9ee0e 467 Pfam PF13193 AMP-binding enzyme C-terminal domain 376 440 4.1E-6 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_04625 bbf2d69f197ff9e46c275284dac9ee0e 467 ProSitePatterns PS00455 Putative AMP-binding domain signature. 147 158 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_05660 63563442e7be0edc6395f681b5293e3a 297 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 8 269 55.321 T 01-11-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 D3790_05660 63563442e7be0edc6395f681b5293e3a 297 SUPERFAMILY SSF52402 15 233 5.35E-52 T 01-11-2018 D3790_05660 63563442e7be0edc6395f681b5293e3a 297 Gene3D G3DSA:3.40.50.620 2 260 1.4E-46 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_05660 63563442e7be0edc6395f681b5293e3a 297 Pfam PF01171 PP-loop family 41 202 3.1E-14 T 01-11-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 D3790_05660 63563442e7be0edc6395f681b5293e3a 297 PIRSF PIRSF004976 2 280 7.3E-69 T 01-11-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 D3790_06160 c185b7eece3d599a508639c123bf2b22 287 Gene3D G3DSA:1.10.10.10 3 84 8.6E-17 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_06160 c185b7eece3d599a508639c123bf2b22 287 SUPERFAMILY SSF46785 5 74 9.52E-14 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_06160 c185b7eece3d599a508639c123bf2b22 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 6.3E-14 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_08465 cf4e215a544a68e96e464f40930e4944 699 Pfam PF03572 Peptidase family S41 378 551 5.5E-52 T 01-11-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 D3790_08465 cf4e215a544a68e96e464f40930e4944 699 SUPERFAMILY SSF52096 204 557 7.46E-69 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily D3790_08465 cf4e215a544a68e96e464f40930e4944 699 Gene3D G3DSA:2.30.42.10 258 342 5.0E-13 T 01-11-2018 D3790_08465 cf4e215a544a68e96e464f40930e4944 699 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 557 689 1.3E-38 T 01-11-2018 IPR020992 Tail specific protease, C-terminal D3790_08465 cf4e215a544a68e96e464f40930e4944 699 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 263 341 2.9E-14 T 01-11-2018 IPR001478 PDZ domain GO:0005515 D3790_08465 cf4e215a544a68e96e464f40930e4944 699 Gene3D G3DSA:3.90.226.10 345 570 4.4E-56 T 01-11-2018 D3790_08465 cf4e215a544a68e96e464f40930e4944 699 SMART SM00245 348 553 3.7E-76 T 01-11-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 D3790_08465 cf4e215a544a68e96e464f40930e4944 699 SMART SM00228 268 345 8.4E-11 T 01-11-2018 IPR001478 PDZ domain GO:0005515 D3790_08465 cf4e215a544a68e96e464f40930e4944 699 SUPERFAMILY SSF50156 241 364 3.27E-16 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 D3790_08465 cf4e215a544a68e96e464f40930e4944 699 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 221 573 2.9E-119 T 01-11-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 D3790_03310 66e7333c769ac1fbeff73e99f9d6a58b 395 Gene3D G3DSA:3.50.50.60 9 342 8.5E-102 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_03310 66e7333c769ac1fbeff73e99f9d6a58b 395 Pfam PF01494 FAD binding domain 8 344 2.4E-25 T 01-11-2018 IPR002938 FAD-binding domain GO:0071949 D3790_03310 66e7333c769ac1fbeff73e99f9d6a58b 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 2.3E-17 T 01-11-2018 D3790_03310 66e7333c769ac1fbeff73e99f9d6a58b 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 2.3E-17 T 01-11-2018 D3790_03310 66e7333c769ac1fbeff73e99f9d6a58b 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 161 176 2.3E-17 T 01-11-2018 D3790_03310 66e7333c769ac1fbeff73e99f9d6a58b 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 2.3E-17 T 01-11-2018 D3790_03310 66e7333c769ac1fbeff73e99f9d6a58b 395 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 9 394 8.5E-123 T 01-11-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 D3790_03310 66e7333c769ac1fbeff73e99f9d6a58b 395 SUPERFAMILY SSF51905 7 387 1.28E-57 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_03310 66e7333c769ac1fbeff73e99f9d6a58b 395 Gene3D G3DSA:3.30.9.50 84 273 8.5E-102 T 01-11-2018 D3790_02990 616085e00efe046aa4014e496ffc9d0e 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.075 T 01-11-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_02990 616085e00efe046aa4014e496ffc9d0e 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 7.5E-29 T 01-11-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_02990 616085e00efe046aa4014e496ffc9d0e 82 Gene3D G3DSA:3.30.1320.10 1 82 1.1E-30 T 01-11-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_02990 616085e00efe046aa4014e496ffc9d0e 82 Pfam PF00886 Ribosomal protein S16 8 68 8.6E-24 T 01-11-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_02990 616085e00efe046aa4014e496ffc9d0e 82 SUPERFAMILY SSF54565 1 76 7.72E-29 T 01-11-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_02990 616085e00efe046aa4014e496ffc9d0e 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 01-11-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14695 166fc2418e02a627ae04d580e279fd7c 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 2.6E-44 T 01-11-2018 IPR013527 YicC-like, N-terminal D3790_14695 166fc2418e02a627ae04d580e279fd7c 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 2.1E-129 T 01-11-2018 IPR005229 Conserved hypothetical protein CHP00255 D3790_14695 166fc2418e02a627ae04d580e279fd7c 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.3E-34 T 01-11-2018 IPR013551 Domain of unknown function DUF1732 D3790_06065 6de3958d42b5408956391be570770ddf 865 SUPERFAMILY SSF141571 684 843 2.35E-25 T 01-11-2018 D3790_06065 6de3958d42b5408956391be570770ddf 865 Gene3D G3DSA:2.160.20.80 527 608 1.0E-12 T 01-11-2018 D3790_06065 6de3958d42b5408956391be570770ddf 865 Pfam PF13599 Pentapeptide repeats (9 copies) 617 684 2.7E-8 T 01-11-2018 IPR001646 Pentapeptide repeat D3790_06065 6de3958d42b5408956391be570770ddf 865 Pfam PF13599 Pentapeptide repeats (9 copies) 549 614 1.1E-6 T 01-11-2018 IPR001646 Pentapeptide repeat D3790_06065 6de3958d42b5408956391be570770ddf 865 Pfam PF13599 Pentapeptide repeats (9 copies) 729 796 6.8E-8 T 01-11-2018 IPR001646 Pentapeptide repeat D3790_06065 6de3958d42b5408956391be570770ddf 865 Gene3D G3DSA:2.160.20.80 735 859 2.1E-18 T 01-11-2018 D3790_06065 6de3958d42b5408956391be570770ddf 865 Gene3D G3DSA:2.160.20.80 609 734 6.0E-17 T 01-11-2018 D3790_06065 6de3958d42b5408956391be570770ddf 865 Pfam PF00805 Pentapeptide repeats (8 copies) 803 838 2.8E-6 T 01-11-2018 IPR001646 Pentapeptide repeat D3790_06065 6de3958d42b5408956391be570770ddf 865 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 21 307 3.1E-80 T 01-11-2018 IPR018683 Domain of unknown function DUF2169 D3790_06065 6de3958d42b5408956391be570770ddf 865 SUPERFAMILY SSF141571 545 690 1.96E-26 T 01-11-2018 D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 SUPERFAMILY SSF110942 514 627 3.4E-34 T 01-11-2018 IPR037196 HSP90, C-terminal domain D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 185 2.5E-14 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 SUPERFAMILY SSF54211 234 489 4.02E-101 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 Gene3D G3DSA:3.40.50.11260 406 496 1.9E-36 T 01-11-2018 D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 Pfam PF00183 Hsp90 protein 216 626 5.7E-127 T 01-11-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 PRINTS PR00775 90kDa heat shock protein signature 7 27 2.9E-64 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 PRINTS PR00775 90kDa heat shock protein signature 28 50 2.9E-64 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 PRINTS PR00775 90kDa heat shock protein signature 174 191 2.9E-64 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 PRINTS PR00775 90kDa heat shock protein signature 95 112 2.9E-64 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 PRINTS PR00775 90kDa heat shock protein signature 192 210 2.9E-64 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 PRINTS PR00775 90kDa heat shock protein signature 77 94 2.9E-64 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 PRINTS PR00775 90kDa heat shock protein signature 122 144 2.9E-64 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 SMART SM00387 29 186 1.2E-11 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 Gene3D G3DSA:1.20.120.790 497 628 2.1E-44 T 01-11-2018 IPR037196 HSP90, C-terminal domain D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 27 36 - T 01-11-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 Hamap MF_00505 Chaperone protein HtpG [htpG]. 4 627 32.596 T 01-11-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 Gene3D G3DSA:3.30.230.80 233 405 1.5E-71 T 01-11-2018 D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 SUPERFAMILY SSF55874 6 215 4.32E-67 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 Gene3D G3DSA:3.30.565.10 2 232 2.5E-78 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_11475 0c96a1ae0bf8b16017fd53e83f93a76e 631 PIRSF PIRSF002583 1 631 4.5E-219 T 01-11-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 D3790_14425 7942feed73d2848dc199b0c24074daf8 457 SUPERFAMILY SSF48557 3 456 1.4E-139 T 01-11-2018 IPR008948 L-Aspartase-like GO:0003824 D3790_14425 7942feed73d2848dc199b0c24074daf8 457 Gene3D G3DSA:1.10.40.30 363 433 1.3E-148 T 01-11-2018 D3790_14425 7942feed73d2848dc199b0c24074daf8 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 01-11-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 D3790_14425 7942feed73d2848dc199b0c24074daf8 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 6.5E-29 T 01-11-2018 IPR000362 Fumarate lyase family D3790_14425 7942feed73d2848dc199b0c24074daf8 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 6.5E-29 T 01-11-2018 IPR000362 Fumarate lyase family D3790_14425 7942feed73d2848dc199b0c24074daf8 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 6.5E-29 T 01-11-2018 IPR000362 Fumarate lyase family D3790_14425 7942feed73d2848dc199b0c24074daf8 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 6.5E-29 T 01-11-2018 IPR000362 Fumarate lyase family D3790_14425 7942feed73d2848dc199b0c24074daf8 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.107 T 01-11-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D3790_14425 7942feed73d2848dc199b0c24074daf8 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.0E-68 T 01-11-2018 D3790_14425 7942feed73d2848dc199b0c24074daf8 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.0E-68 T 01-11-2018 D3790_14425 7942feed73d2848dc199b0c24074daf8 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.0E-68 T 01-11-2018 D3790_14425 7942feed73d2848dc199b0c24074daf8 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.0E-68 T 01-11-2018 D3790_14425 7942feed73d2848dc199b0c24074daf8 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.0E-68 T 01-11-2018 D3790_14425 7942feed73d2848dc199b0c24074daf8 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.0E-68 T 01-11-2018 D3790_14425 7942feed73d2848dc199b0c24074daf8 457 Pfam PF00206 Lyase 6 301 4.7E-96 T 01-11-2018 IPR022761 Fumarate lyase, N-terminal D3790_14425 7942feed73d2848dc199b0c24074daf8 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 1.0E-209 T 01-11-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D3790_14425 7942feed73d2848dc199b0c24074daf8 457 Gene3D G3DSA:1.10.275.10 1 107 1.3E-36 T 01-11-2018 IPR024083 Fumarase/histidase, N-terminal D3790_14425 7942feed73d2848dc199b0c24074daf8 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 1.1E-21 T 01-11-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D3790_14425 7942feed73d2848dc199b0c24074daf8 457 Gene3D G3DSA:1.20.200.10 108 446 1.3E-148 T 01-11-2018 D3790_11290 621a66c994e2d0e9a9687cd148c5a89b 509 Pfam PF07690 Major Facilitator Superfamily 18 365 5.6E-31 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_11290 621a66c994e2d0e9a9687cd148c5a89b 509 SUPERFAMILY SSF103473 13 405 7.32E-44 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_11290 621a66c994e2d0e9a9687cd148c5a89b 509 SUPERFAMILY SSF103473 370 498 6.41E-5 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_11290 621a66c994e2d0e9a9687cd148c5a89b 509 Gene3D G3DSA:1.20.1250.20 13 202 6.3E-15 T 01-11-2018 D3790_11290 621a66c994e2d0e9a9687cd148c5a89b 509 Gene3D G3DSA:1.20.1250.20 214 406 2.8E-15 T 01-11-2018 D3790_05205 51ccf00b6a0ddfab220d3b1b5e19a7cf 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.4E-15 T 01-11-2018 D3790_05205 51ccf00b6a0ddfab220d3b1b5e19a7cf 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 5.4E-15 T 01-11-2018 D3790_05205 51ccf00b6a0ddfab220d3b1b5e19a7cf 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 5.4E-15 T 01-11-2018 D3790_05205 51ccf00b6a0ddfab220d3b1b5e19a7cf 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 5.4E-15 T 01-11-2018 D3790_05205 51ccf00b6a0ddfab220d3b1b5e19a7cf 434 SUPERFAMILY SSF51905 1 346 5.94E-31 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_05205 51ccf00b6a0ddfab220d3b1b5e19a7cf 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 338 1.1E-65 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D3790_05205 51ccf00b6a0ddfab220d3b1b5e19a7cf 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 1.7E-7 T 01-11-2018 D3790_05205 51ccf00b6a0ddfab220d3b1b5e19a7cf 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.7E-7 T 01-11-2018 D3790_05205 51ccf00b6a0ddfab220d3b1b5e19a7cf 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 1.7E-7 T 01-11-2018 D3790_05205 51ccf00b6a0ddfab220d3b1b5e19a7cf 434 Gene3D G3DSA:3.50.50.100 1 409 5.4E-117 T 01-11-2018 D3790_01240 8e6414919b5184420be57036e383c98d 147 Pfam PF03230 Antirestriction protein 39 126 5.9E-19 T 01-11-2018 IPR004914 Antirestriction protein D3790_01240 8e6414919b5184420be57036e383c98d 147 Gene3D G3DSA:1.10.472.120 8 126 2.0E-17 T 01-11-2018 D3790_17595 87026fda5c8ccd4298608d03723cedcb 134 PIRSF PIRSF006318 1 134 3.8E-49 T 01-11-2018 IPR009386 Protein of unknown function DUF1043 D3790_17595 87026fda5c8ccd4298608d03723cedcb 134 Pfam PF06295 Protein of unknown function (DUF1043) 6 127 6.5E-49 T 01-11-2018 IPR009386 Protein of unknown function DUF1043 D3790_13795 8a6849cac5e029f6c96b17f173141367 304 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 299 55.206 T 01-11-2018 IPR023009 Tyrosine recombinase XerC/XerD D3790_13795 8a6849cac5e029f6c96b17f173141367 304 Gene3D G3DSA:1.10.150.130 9 104 2.0E-18 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal D3790_13795 8a6849cac5e029f6c96b17f173141367 304 Gene3D G3DSA:1.10.443.10 116 293 1.0E-59 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_13795 8a6849cac5e029f6c96b17f173141367 304 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 13 301 5.3E-106 T 01-11-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 D3790_13795 8a6849cac5e029f6c96b17f173141367 304 SUPERFAMILY SSF47823 12 104 1.94E-9 T 01-11-2018 D3790_13795 8a6849cac5e029f6c96b17f173141367 304 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 95 5.0E-19 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 D3790_13795 8a6849cac5e029f6c96b17f173141367 304 Pfam PF00589 Phage integrase family 117 285 3.7E-53 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D3790_13795 8a6849cac5e029f6c96b17f173141367 304 SUPERFAMILY SSF56349 111 297 2.53E-56 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_18410 3510e65886dce4fa845e5a95700fd768 242 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.4E-103 T 01-11-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 D3790_18410 3510e65886dce4fa845e5a95700fd768 242 SUPERFAMILY SSF53633 7 240 1.57E-72 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily D3790_18410 3510e65886dce4fa845e5a95700fd768 242 Pfam PF00696 Amino acid kinase family 11 219 6.8E-28 T 01-11-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D3790_18410 3510e65886dce4fa845e5a95700fd768 242 Gene3D G3DSA:3.40.1160.10 3 241 8.7E-76 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily D3790_18410 3510e65886dce4fa845e5a95700fd768 242 PIRSF PIRSF005650 4 242 7.1E-90 T 01-11-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 D3790_18410 3510e65886dce4fa845e5a95700fd768 242 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.12 T 01-11-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 D3790_06970 e633a563669d8052c2f82ee5e4c2048a 163 SUPERFAMILY SSF46785 14 156 1.69E-30 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_06970 e633a563669d8052c2f82ee5e4c2048a 163 Gene3D G3DSA:1.10.10.10 1 158 2.8E-33 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_06970 e633a563669d8052c2f82ee5e4c2048a 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 3.8E-10 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_06970 e633a563669d8052c2f82ee5e4c2048a 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 3.8E-10 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_06970 e633a563669d8052c2f82ee5e4c2048a 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 3.8E-10 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_06970 e633a563669d8052c2f82ee5e4c2048a 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 3.8E-10 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_06970 e633a563669d8052c2f82ee5e4c2048a 163 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 01-11-2018 IPR023187 Transcriptional regulator MarR-type, conserved site D3790_06970 e633a563669d8052c2f82ee5e4c2048a 163 Pfam PF01047 MarR family 51 109 8.4E-11 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_06970 e633a563669d8052c2f82ee5e4c2048a 163 SMART SM00347 44 145 1.1E-20 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 91 317 1.4E-33 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 SUPERFAMILY SSF88659 168 242 7.85E-16 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 52 329 2.8E-142 T 01-11-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 Pfam PF04539 Sigma-70 region 3 175 248 1.2E-21 T 01-11-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 Gene3D G3DSA:1.10.601.10 4 164 2.9E-46 T 01-11-2018 D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 Gene3D G3DSA:1.10.10.10 168 243 5.2E-19 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 PRINTS PR00046 Major sigma-70 factor signature 303 314 2.5E-27 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 PRINTS PR00046 Major sigma-70 factor signature 119 132 2.5E-27 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 PRINTS PR00046 Major sigma-70 factor signature 143 151 2.5E-27 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 PRINTS PR00046 Major sigma-70 factor signature 288 303 2.5E-27 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 PRINTS PR00046 Major sigma-70 factor signature 267 279 2.5E-27 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 Gene3D G3DSA:1.10.10.10 245 321 1.1E-19 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 Pfam PF04542 Sigma-70 region 2 95 164 6.9E-20 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 119 132 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 12 329 39.78 T 01-11-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 Pfam PF04545 Sigma-70, region 4 263 316 5.2E-15 T 01-11-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 Pfam PF00140 Sigma-70 factor, region 1.2 57 88 1.2E-10 T 01-11-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 SUPERFAMILY SSF88659 226 323 1.63E-22 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 288 314 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_19155 7e8bc621073b193f947de5dd6e22d9e9 331 SUPERFAMILY SSF88946 57 165 1.57E-45 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D3790_05620 e8c50de0b18d707a258b4f1a8e549429 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 1.2E-93 T 01-11-2018 IPR014319 Phage shock protein, PspA D3790_05620 e8c50de0b18d707a258b4f1a8e549429 223 Pfam PF04012 PspA/IM30 family 2 216 1.7E-48 T 01-11-2018 IPR007157 PspA/IM30 D3790_18290 d27a3030315e536101be0108c5a62d40 478 SMART SM00235 54 240 7.2E-7 T 01-11-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 D3790_18290 d27a3030315e536101be0108c5a62d40 478 SUPERFAMILY SSF51120 256 477 1.96E-43 T 01-11-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D3790_18290 d27a3030315e536101be0108c5a62d40 478 Gene3D G3DSA:3.40.390.10 44 263 6.2E-167 T 01-11-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 D3790_18290 d27a3030315e536101be0108c5a62d40 478 Pfam PF00413 Matrixin 96 198 2.5E-7 T 01-11-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 D3790_18290 d27a3030315e536101be0108c5a62d40 478 PRINTS PR00313 NodO calcium binding signature 368 376 9.4E-12 T 01-11-2018 D3790_18290 d27a3030315e536101be0108c5a62d40 478 PRINTS PR00313 NodO calcium binding signature 338 349 9.4E-12 T 01-11-2018 D3790_18290 d27a3030315e536101be0108c5a62d40 478 PRINTS PR00313 NodO calcium binding signature 359 367 9.4E-12 T 01-11-2018 D3790_18290 d27a3030315e536101be0108c5a62d40 478 PRINTS PR00313 NodO calcium binding signature 377 386 9.4E-12 T 01-11-2018 D3790_18290 d27a3030315e536101be0108c5a62d40 478 PIRSF PIRSF001205 1 478 5.6E-216 T 01-11-2018 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 D3790_18290 d27a3030315e536101be0108c5a62d40 478 Pfam PF08548 Peptidase M10 serralysin C terminal 256 478 4.0E-86 T 01-11-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 D3790_18290 d27a3030315e536101be0108c5a62d40 478 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 364 382 - T 01-11-2018 IPR018511 Hemolysin-type calcium-binding conserved site D3790_18290 d27a3030315e536101be0108c5a62d40 478 Gene3D G3DSA:2.150.10.10 264 470 6.2E-167 T 01-11-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D3790_18290 d27a3030315e536101be0108c5a62d40 478 SUPERFAMILY SSF55486 23 254 3.91E-52 T 01-11-2018 D3790_14310 323602fd227659d01fb0e9e7d628e3e1 394 Gene3D G3DSA:3.40.50.300 1 203 2.6E-71 T 01-11-2018 D3790_14310 323602fd227659d01fb0e9e7d628e3e1 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.5E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_14310 323602fd227659d01fb0e9e7d628e3e1 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.5E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_14310 323602fd227659d01fb0e9e7d628e3e1 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.5E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_14310 323602fd227659d01fb0e9e7d628e3e1 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.5E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_14310 323602fd227659d01fb0e9e7d628e3e1 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.5E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_14310 323602fd227659d01fb0e9e7d628e3e1 394 SUPERFAMILY SSF50447 205 301 1.94E-31 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily D3790_14310 323602fd227659d01fb0e9e7d628e3e1 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site D3790_14310 323602fd227659d01fb0e9e7d628e3e1 394 SUPERFAMILY SSF52540 6 219 5.4E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_14310 323602fd227659d01fb0e9e7d628e3e1 394 SUPERFAMILY SSF50465 298 393 7.77E-36 T 01-11-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal D3790_14310 323602fd227659d01fb0e9e7d628e3e1 394 Gene3D G3DSA:2.40.30.10 206 334 3.6E-54 T 01-11-2018 D3790_14310 323602fd227659d01fb0e9e7d628e3e1 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.4E-17 T 01-11-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 D3790_14310 323602fd227659d01fb0e9e7d628e3e1 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 4.3E-14 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D3790_14310 323602fd227659d01fb0e9e7d628e3e1 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 7.4E-239 T 01-11-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D3790_14310 323602fd227659d01fb0e9e7d628e3e1 394 Gene3D G3DSA:2.40.30.10 338 393 4.8E-29 T 01-11-2018 D3790_14310 323602fd227659d01fb0e9e7d628e3e1 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.445 T 01-11-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D3790_14310 323602fd227659d01fb0e9e7d628e3e1 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 6.2E-59 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_14310 323602fd227659d01fb0e9e7d628e3e1 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.2E-33 T 01-11-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal D3790_12730 e73ca9e0b53e45a698c8ed418b9c3f93 370 Pfam PF13458 Periplasmic binding protein 26 361 1.5E-55 T 01-11-2018 IPR028081 Leucine-binding protein domain D3790_12730 e73ca9e0b53e45a698c8ed418b9c3f93 370 Gene3D G3DSA:3.40.50.2300 145 273 8.2E-110 T 01-11-2018 D3790_12730 e73ca9e0b53e45a698c8ed418b9c3f93 370 Gene3D G3DSA:3.40.50.2300 28 346 8.2E-110 T 01-11-2018 D3790_12730 e73ca9e0b53e45a698c8ed418b9c3f93 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 68 86 3.4E-58 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 D3790_12730 e73ca9e0b53e45a698c8ed418b9c3f93 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 330 345 3.4E-58 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 D3790_12730 e73ca9e0b53e45a698c8ed418b9c3f93 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 49 65 3.4E-58 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 D3790_12730 e73ca9e0b53e45a698c8ed418b9c3f93 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 89 99 3.4E-58 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 D3790_12730 e73ca9e0b53e45a698c8ed418b9c3f93 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 27 43 3.4E-58 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 D3790_12730 e73ca9e0b53e45a698c8ed418b9c3f93 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 255 273 3.4E-58 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 D3790_12730 e73ca9e0b53e45a698c8ed418b9c3f93 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 278 291 3.4E-58 T 01-11-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 D3790_12730 e73ca9e0b53e45a698c8ed418b9c3f93 370 SUPERFAMILY SSF53822 25 366 4.71E-83 T 01-11-2018 IPR028082 Periplasmic binding protein-like I D3790_01195 ec477d68f29c1b256eb43ac6de4e9214 90 Gene3D G3DSA:1.10.3880.10 1 90 3.5E-38 T 01-11-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 D3790_01195 ec477d68f29c1b256eb43ac6de4e9214 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 3.4E-40 T 01-11-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 D3790_01195 ec477d68f29c1b256eb43ac6de4e9214 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 1.0E-34 T 01-11-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 D3790_01195 ec477d68f29c1b256eb43ac6de4e9214 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.161 T 01-11-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 D3790_01195 ec477d68f29c1b256eb43ac6de4e9214 90 SUPERFAMILY SSF111148 1 89 9.68E-40 T 01-11-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 D3790_01195 ec477d68f29c1b256eb43ac6de4e9214 90 PIRSF PIRSF029827 1 90 5.0E-44 T 01-11-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 D3790_17465 b60bcb0b7e0d92cd317d8a014837da70 218 SMART SM01126 58 199 1.8E-56 T 01-11-2018 IPR024445 ISXO2-like transposase domain D3790_17465 b60bcb0b7e0d92cd317d8a014837da70 218 Pfam PF12762 ISXO2-like transposase domain 60 199 2.5E-36 T 01-11-2018 IPR024445 ISXO2-like transposase domain D3790_17305 fc3ec2123480fcebfc44bfe5d2800042 201 Pfam PF00551 Formyl transferase 2 182 3.4E-44 T 01-11-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D3790_17305 fc3ec2123480fcebfc44bfe5d2800042 201 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 8.2E-51 T 01-11-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 D3790_17305 fc3ec2123480fcebfc44bfe5d2800042 201 SUPERFAMILY SSF53328 2 198 2.22E-52 T 01-11-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D3790_17305 fc3ec2123480fcebfc44bfe5d2800042 201 Gene3D G3DSA:3.40.50.170 1 200 1.9E-55 T 01-11-2018 D3790_18460 40abd8cd2089c59c7206e0b27a76e8dd 265 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 01-11-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D3790_18460 40abd8cd2089c59c7206e0b27a76e8dd 265 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 265 47.614 T 01-11-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 D3790_18460 40abd8cd2089c59c7206e0b27a76e8dd 265 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 264 5.7E-28 T 01-11-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 D3790_18460 40abd8cd2089c59c7206e0b27a76e8dd 265 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 5.6E-8 T 01-11-2018 IPR001451 Hexapeptide repeat D3790_18460 40abd8cd2089c59c7206e0b27a76e8dd 265 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 52 1.5E-8 T 01-11-2018 IPR001451 Hexapeptide repeat D3790_18460 40abd8cd2089c59c7206e0b27a76e8dd 265 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 01-11-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D3790_18460 40abd8cd2089c59c7206e0b27a76e8dd 265 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 263 7.0E-106 T 01-11-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 D3790_18460 40abd8cd2089c59c7206e0b27a76e8dd 265 SUPERFAMILY SSF51161 1 258 9.82E-78 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily D3790_18460 40abd8cd2089c59c7206e0b27a76e8dd 265 Gene3D G3DSA:1.20.1180.10 197 265 2.8E-23 T 01-11-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 D3790_18460 40abd8cd2089c59c7206e0b27a76e8dd 265 Gene3D G3DSA:2.160.10.10 1 196 1.9E-53 T 01-11-2018 D3790_18460 40abd8cd2089c59c7206e0b27a76e8dd 265 PIRSF PIRSF000456 4 265 5.0E-104 T 01-11-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 D3790_10260 8e20b246aa66c991b94ec8f24aae2bd6 73 Gene3D G3DSA:2.30.30.40 1 73 3.2E-32 T 01-11-2018 D3790_10260 8e20b246aa66c991b94ec8f24aae2bd6 73 SUPERFAMILY SSF82057 2 72 1.83E-25 T 01-11-2018 D3790_10260 8e20b246aa66c991b94ec8f24aae2bd6 73 Pfam PF03831 PhnA domain 5 72 1.3E-29 T 01-11-2018 IPR013988 PhnA protein, C-terminal D3790_08820 a73d752aa05140d1ec7c4ed92977d519 195 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 01-11-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 D3790_08820 a73d752aa05140d1ec7c4ed92977d519 195 Pfam PF00239 Resolvase, N terminal domain 4 136 8.0E-48 T 01-11-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 D3790_08820 a73d752aa05140d1ec7c4ed92977d519 195 Pfam PF02796 Helix-turn-helix domain of resolvase 139 181 5.2E-9 T 01-11-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 D3790_08820 a73d752aa05140d1ec7c4ed92977d519 195 Gene3D G3DSA:1.10.10.60 139 187 1.7E-18 T 01-11-2018 D3790_08820 a73d752aa05140d1ec7c4ed92977d519 195 SUPERFAMILY SSF46689 139 182 8.74E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_08820 a73d752aa05140d1ec7c4ed92977d519 195 SUPERFAMILY SSF53041 3 137 1.44E-46 T 01-11-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 D3790_08820 a73d752aa05140d1ec7c4ed92977d519 195 ProSitePatterns PS00398 Site-specific recombinases signature 2. 56 68 - T 01-11-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 D3790_08820 a73d752aa05140d1ec7c4ed92977d519 195 Gene3D G3DSA:3.40.50.1390 2 126 1.1E-52 T 01-11-2018 D3790_08820 a73d752aa05140d1ec7c4ed92977d519 195 SMART SM00857 3 137 2.5E-60 T 01-11-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 D3790_19145 9601085f43f31044f063f7e08746d13a 208 Gene3D G3DSA:3.40.50.150 1 207 3.5E-73 T 01-11-2018 D3790_19145 9601085f43f31044f063f7e08746d13a 208 SUPERFAMILY SSF53335 11 204 1.66E-44 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_19145 9601085f43f31044f063f7e08746d13a 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6 205 2.4E-67 T 01-11-2018 D3790_19145 9601085f43f31044f063f7e08746d13a 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 37.02 T 01-11-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 D3790_19145 9601085f43f31044f063f7e08746d13a 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 207 1.5E-78 T 01-11-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 D3790_19145 9601085f43f31044f063f7e08746d13a 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 01-11-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 D3790_19610 a7342d886c081a345354b0fa86d8b01e 775 Pfam PF07660 Secretin and TonB N terminus short domain 59 107 9.2E-8 T 01-11-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 D3790_19610 a7342d886c081a345354b0fa86d8b01e 775 Gene3D G3DSA:2.170.130.10 129 254 1.7E-31 T 01-11-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D3790_19610 a7342d886c081a345354b0fa86d8b01e 775 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 133 775 3.9E-154 T 01-11-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 D3790_19610 a7342d886c081a345354b0fa86d8b01e 775 Pfam PF00593 TonB dependent receptor 325 773 4.5E-47 T 01-11-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D3790_19610 a7342d886c081a345354b0fa86d8b01e 775 SMART SM00965 57 108 9.2E-12 T 01-11-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 D3790_19610 a7342d886c081a345354b0fa86d8b01e 775 Gene3D G3DSA:3.55.50.30 35 107 1.5E-28 T 01-11-2018 D3790_19610 a7342d886c081a345354b0fa86d8b01e 775 Pfam PF07715 TonB-dependent Receptor Plug Domain 133 245 3.2E-19 T 01-11-2018 IPR012910 TonB-dependent receptor, plug domain D3790_19610 a7342d886c081a345354b0fa86d8b01e 775 Gene3D G3DSA:2.40.170.20 257 775 1.7E-149 T 01-11-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3790_19610 a7342d886c081a345354b0fa86d8b01e 775 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 758 775 - T 01-11-2018 IPR010917 TonB-dependent receptor, conserved site D3790_19610 a7342d886c081a345354b0fa86d8b01e 775 SUPERFAMILY SSF56935 117 775 4.68E-121 T 01-11-2018 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 SUPERFAMILY SSF81886 620 891 3.92E-84 T 01-11-2018 IPR036266 SecA, Wing/Scaffold superfamily D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 Pfam PF07516 SecA Wing and Scaffold domain 617 830 5.3E-68 T 01-11-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 Gene3D G3DSA:3.40.50.300 417 620 7.7E-88 T 01-11-2018 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 Pfam PF07517 SecA DEAD-like domain 7 402 5.8E-132 T 01-11-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 Pfam PF01043 SecA preprotein cross-linking domain 232 358 3.9E-39 T 01-11-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 ProSitePatterns PS01312 SecA family signature. 500 515 - T 01-11-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 SUPERFAMILY SSF81767 227 368 3.01E-44 T 01-11-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 Pfam PF02810 SEC-C motif 883 901 1.2E-9 T 01-11-2018 IPR004027 SEC-C motif D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 Gene3D G3DSA:3.90.1440.10 229 368 2.8E-176 T 01-11-2018 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 SMART SM00957 6 402 0.0 T 01-11-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 Gene3D G3DSA:1.10.3060.10 621 833 1.8E-82 T 01-11-2018 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.961 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 SUPERFAMILY SSF52540 5 415 1.46E-83 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 SMART SM00958 228 358 8.6E-83 T 01-11-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 PRINTS PR00906 SecA protein signature 117 127 3.6E-73 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 PRINTS PR00906 SecA protein signature 413 426 3.6E-73 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 PRINTS PR00906 SecA protein signature 101 115 3.6E-73 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 PRINTS PR00906 SecA protein signature 376 393 3.6E-73 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 PRINTS PR00906 SecA protein signature 170 190 3.6E-73 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 PRINTS PR00906 SecA protein signature 339 361 3.6E-73 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 PRINTS PR00906 SecA protein signature 63 87 3.6E-73 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 SUPERFAMILY SSF52540 416 618 5.46E-57 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_10910 1d18ed2424b5a858bcb852ca04d24dc0 902 Gene3D G3DSA:3.40.50.300 22 415 2.8E-176 T 01-11-2018 D3790_06220 237e107bf5157966cbb2cbda9aaf551e 546 Gene3D G3DSA:3.10.105.10 298 513 2.0E-183 T 01-11-2018 D3790_06220 237e107bf5157966cbb2cbda9aaf551e 546 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 01-11-2018 IPR023765 Solute-binding protein family 5, conserved site D3790_06220 237e107bf5157966cbb2cbda9aaf551e 546 Gene3D G3DSA:3.90.76.10 72 195 2.0E-183 T 01-11-2018 D3790_06220 237e107bf5157966cbb2cbda9aaf551e 546 SUPERFAMILY SSF53850 36 526 1.66E-134 T 01-11-2018 D3790_06220 237e107bf5157966cbb2cbda9aaf551e 546 Gene3D G3DSA:3.40.190.10 43 524 2.0E-183 T 01-11-2018 D3790_06220 237e107bf5157966cbb2cbda9aaf551e 546 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 464 1.3E-83 T 01-11-2018 IPR000914 Solute-binding protein family 5 domain D3790_06220 237e107bf5157966cbb2cbda9aaf551e 546 PIRSF PIRSF002741 1 544 1.7E-103 T 01-11-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 D3790_05580 155542ed0e2bc5a8a6cf4b775a5ea2ce 228 Gene3D G3DSA:3.40.190.10 199 210 4.7E-57 T 01-11-2018 D3790_05580 155542ed0e2bc5a8a6cf4b775a5ea2ce 228 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 13 152 3.2E-16 T 01-11-2018 IPR000914 Solute-binding protein family 5 domain D3790_05580 155542ed0e2bc5a8a6cf4b775a5ea2ce 228 SUPERFAMILY SSF53850 15 226 1.09E-36 T 01-11-2018 D3790_05580 155542ed0e2bc5a8a6cf4b775a5ea2ce 228 Gene3D G3DSA:3.10.105.10 13 198 4.7E-57 T 01-11-2018 D3790_00180 6bf66cd352afdc3b228da10540a7c3ee 660 SUPERFAMILY SSF69279 14 181 4.93E-43 T 01-11-2018 D3790_00180 6bf66cd352afdc3b228da10540a7c3ee 660 SUPERFAMILY SSF69279 182 355 2.38E-28 T 01-11-2018 D3790_00180 6bf66cd352afdc3b228da10540a7c3ee 660 SUPERFAMILY SSF69255 354 441 1.02E-28 T 01-11-2018 D3790_00180 6bf66cd352afdc3b228da10540a7c3ee 660 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 6 510 4.2E-166 T 01-11-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset D3790_00180 6bf66cd352afdc3b228da10540a7c3ee 660 SUPERFAMILY SSF69349 432 591 1.1E-36 T 01-11-2018 D3790_00180 6bf66cd352afdc3b228da10540a7c3ee 660 Gene3D G3DSA:2.30.110.50 22 323 1.3E-67 T 01-11-2018 D3790_00180 6bf66cd352afdc3b228da10540a7c3ee 660 Gene3D G3DSA:3.55.50.10 95 186 1.3E-67 T 01-11-2018 D3790_00180 6bf66cd352afdc3b228da10540a7c3ee 660 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 18 493 1.8E-110 T 01-11-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein D3790_00180 6bf66cd352afdc3b228da10540a7c3ee 660 Gene3D G3DSA:2.40.50.230 348 447 5.1E-37 T 01-11-2018 IPR037026 Vgr protein, OB-fold domain superfamily D3790_00180 6bf66cd352afdc3b228da10540a7c3ee 660 Pfam PF05954 Phage late control gene D protein (GPD) 27 321 3.3E-66 T 01-11-2018 D3790_00180 6bf66cd352afdc3b228da10540a7c3ee 660 Gene3D G3DSA:3.30.1920.30 218 278 1.3E-67 T 01-11-2018 D3790_07325 91730c6b71857e0ab3e993acb4449674 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 6.0E-59 T 01-11-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D3790_07325 91730c6b71857e0ab3e993acb4449674 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 489 1.8E-195 T 01-11-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D3790_07325 91730c6b71857e0ab3e993acb4449674 491 Gene3D G3DSA:3.30.360.10 176 476 2.6E-168 T 01-11-2018 D3790_07325 91730c6b71857e0ab3e993acb4449674 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 01-11-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D3790_07325 91730c6b71857e0ab3e993acb4449674 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 5.0E-114 T 01-11-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D3790_07325 91730c6b71857e0ab3e993acb4449674 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 489 89.601 T 01-11-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D3790_07325 91730c6b71857e0ab3e993acb4449674 491 SUPERFAMILY SSF55347 176 488 2.75E-111 T 01-11-2018 D3790_07325 91730c6b71857e0ab3e993acb4449674 491 SUPERFAMILY SSF51735 5 189 1.4E-57 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_07325 91730c6b71857e0ab3e993acb4449674 491 Gene3D G3DSA:3.40.50.720 12 437 2.6E-168 T 01-11-2018 D3790_07325 91730c6b71857e0ab3e993acb4449674 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 1.0E-47 T 01-11-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D3790_07325 91730c6b71857e0ab3e993acb4449674 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 1.0E-47 T 01-11-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D3790_07325 91730c6b71857e0ab3e993acb4449674 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 1.0E-47 T 01-11-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D3790_07325 91730c6b71857e0ab3e993acb4449674 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 1.0E-47 T 01-11-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D3790_07325 91730c6b71857e0ab3e993acb4449674 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 1.0E-47 T 01-11-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D3790_07325 91730c6b71857e0ab3e993acb4449674 491 PIRSF PIRSF000110 1 491 7.0E-180 T 01-11-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D3790_09215 2bd5347a20344aff298927402e89f8eb 145 Pfam PF13358 DDE superfamily endonuclease 1 131 2.8E-31 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_09215 2bd5347a20344aff298927402e89f8eb 145 Gene3D G3DSA:3.30.420.470 1 143 8.0E-18 T 01-11-2018 D3790_00455 2bd5347a20344aff298927402e89f8eb 145 Pfam PF13358 DDE superfamily endonuclease 1 131 2.8E-31 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_00455 2bd5347a20344aff298927402e89f8eb 145 Gene3D G3DSA:3.30.420.470 1 143 8.0E-18 T 01-11-2018 D3790_01610 2bd5347a20344aff298927402e89f8eb 145 Pfam PF13358 DDE superfamily endonuclease 1 131 2.8E-31 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_01610 2bd5347a20344aff298927402e89f8eb 145 Gene3D G3DSA:3.30.420.470 1 143 8.0E-18 T 01-11-2018 D3790_06800 2bd5347a20344aff298927402e89f8eb 145 Pfam PF13358 DDE superfamily endonuclease 1 131 2.8E-31 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_06800 2bd5347a20344aff298927402e89f8eb 145 Gene3D G3DSA:3.30.420.470 1 143 8.0E-18 T 01-11-2018 D3790_11095 2bd5347a20344aff298927402e89f8eb 145 Pfam PF13358 DDE superfamily endonuclease 1 131 2.8E-31 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_11095 2bd5347a20344aff298927402e89f8eb 145 Gene3D G3DSA:3.30.420.470 1 143 8.0E-18 T 01-11-2018 D3790_02020 2bd5347a20344aff298927402e89f8eb 145 Pfam PF13358 DDE superfamily endonuclease 1 131 2.8E-31 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_02020 2bd5347a20344aff298927402e89f8eb 145 Gene3D G3DSA:3.30.420.470 1 143 8.0E-18 T 01-11-2018 D3790_17090 2bd5347a20344aff298927402e89f8eb 145 Pfam PF13358 DDE superfamily endonuclease 1 131 2.8E-31 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_17090 2bd5347a20344aff298927402e89f8eb 145 Gene3D G3DSA:3.30.420.470 1 143 8.0E-18 T 01-11-2018 D3790_12240 2bd5347a20344aff298927402e89f8eb 145 Pfam PF13358 DDE superfamily endonuclease 1 131 2.8E-31 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_12240 2bd5347a20344aff298927402e89f8eb 145 Gene3D G3DSA:3.30.420.470 1 143 8.0E-18 T 01-11-2018 D3790_03085 9dd60b6f7fe789edbea272ad71b8d1f0 883 SUPERFAMILY SSF52210 128 289 1.05E-33 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D3790_03085 9dd60b6f7fe789edbea272ad71b8d1f0 883 Gene3D G3DSA:3.40.50.720 7 128 1.0E-28 T 01-11-2018 D3790_03085 9dd60b6f7fe789edbea272ad71b8d1f0 883 Gene3D G3DSA:3.30.470.20 484 693 6.1E-56 T 01-11-2018 D3790_03085 9dd60b6f7fe789edbea272ad71b8d1f0 883 Pfam PF13380 CoA binding domain 16 133 2.9E-18 T 01-11-2018 IPR003781 CoA-binding GO:0048037 D3790_03085 9dd60b6f7fe789edbea272ad71b8d1f0 883 Gene3D G3DSA:3.40.50.261 129 286 5.8E-44 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D3790_03085 9dd60b6f7fe789edbea272ad71b8d1f0 883 SUPERFAMILY SSF56059 484 689 1.8E-26 T 01-11-2018 D3790_03085 9dd60b6f7fe789edbea272ad71b8d1f0 883 Pfam PF13549 ATP-grasp domain 477 697 7.6E-73 T 01-11-2018 D3790_03085 9dd60b6f7fe789edbea272ad71b8d1f0 883 Gene3D G3DSA:3.40.50.261 288 457 6.1E-39 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D3790_03085 9dd60b6f7fe789edbea272ad71b8d1f0 883 SMART SM00881 12 107 1.4E-19 T 01-11-2018 IPR003781 CoA-binding GO:0048037 D3790_03085 9dd60b6f7fe789edbea272ad71b8d1f0 883 SUPERFAMILY SSF51735 4 138 1.14E-28 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_03085 9dd60b6f7fe789edbea272ad71b8d1f0 883 Gene3D G3DSA:3.40.630.30 720 883 1.1E-34 T 01-11-2018 D3790_03085 9dd60b6f7fe789edbea272ad71b8d1f0 883 Pfam PF13302 Acetyltransferase (GNAT) domain 730 867 2.9E-7 T 01-11-2018 IPR000182 GNAT domain D3790_03085 9dd60b6f7fe789edbea272ad71b8d1f0 883 SUPERFAMILY SSF52210 290 450 4.19E-33 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D3790_03085 9dd60b6f7fe789edbea272ad71b8d1f0 883 SUPERFAMILY SSF55729 731 869 6.34E-18 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_03085 9dd60b6f7fe789edbea272ad71b8d1f0 883 Gene3D G3DSA:3.30.1490.20 502 579 6.1E-56 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D3790_03085 9dd60b6f7fe789edbea272ad71b8d1f0 883 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 150 283 4.8E-42 T 01-11-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain D3790_09230 6ce1c48a4b8f3d4b98d7d6351fe6b1e6 494 Pfam PF00474 Sodium:solute symporter family 35 437 5.8E-135 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 D3790_09230 6ce1c48a4b8f3d4b98d7d6351fe6b1e6 494 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 01-11-2018 IPR018212 Sodium/solute symporter, conserved site D3790_09230 6ce1c48a4b8f3d4b98d7d6351fe6b1e6 494 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 3.5E-118 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 D3790_09230 6ce1c48a4b8f3d4b98d7d6351fe6b1e6 494 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 491 4.1E-224 T 01-11-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 D3790_09230 6ce1c48a4b8f3d4b98d7d6351fe6b1e6 494 Gene3D G3DSA:1.20.1730.10 23 494 5.3E-93 T 01-11-2018 IPR038377 Sodium/glucose symporter superfamily D3790_09230 6ce1c48a4b8f3d4b98d7d6351fe6b1e6 494 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 01-11-2018 IPR018212 Sodium/solute symporter, conserved site D3790_09940 9e29f05c49ccca2fb42a333885cd4be5 447 Pfam PF16193 AAA C-terminal domain 188 267 2.7E-22 T 01-11-2018 IPR032423 AAA C-terminal domain D3790_09940 9e29f05c49ccca2fb42a333885cd4be5 447 Gene3D G3DSA:3.40.50.300 1 163 1.0E-48 T 01-11-2018 D3790_09940 9e29f05c49ccca2fb42a333885cd4be5 447 Gene3D G3DSA:1.10.8.60 165 240 6.3E-28 T 01-11-2018 D3790_09940 9e29f05c49ccca2fb42a333885cd4be5 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 433 5.3E-64 T 01-11-2018 IPR021886 MgsA AAA+ ATPase C-terminal D3790_09940 9e29f05c49ccca2fb42a333885cd4be5 447 SMART SM00382 49 165 1.1E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_09940 9e29f05c49ccca2fb42a333885cd4be5 447 Gene3D G3DSA:1.10.3710.10 346 447 3.0E-36 T 01-11-2018 D3790_09940 9e29f05c49ccca2fb42a333885cd4be5 447 SUPERFAMILY SSF52540 6 234 6.83E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09940 9e29f05c49ccca2fb42a333885cd4be5 447 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 14 138 9.0E-15 T 01-11-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 D3790_09940 9e29f05c49ccca2fb42a333885cd4be5 447 SUPERFAMILY SSF48019 252 434 1.36E-70 T 01-11-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 D3790_09940 9e29f05c49ccca2fb42a333885cd4be5 447 Gene3D G3DSA:1.20.272.10 241 345 2.2E-43 T 01-11-2018 D3790_17900 a0b6e908ae1e9724e4c7bcfefcdc8593 182 Pfam PF04586 Caudovirus prohead serine protease 7 165 5.1E-47 T 01-11-2018 IPR006433 Prohead protease D3790_17900 a0b6e908ae1e9724e4c7bcfefcdc8593 182 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 18 161 3.9E-38 T 01-11-2018 IPR006433 Prohead protease D3790_19630 9b4f3ca2b80f82b17d3f04d88c97f808 424 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 3.0E-147 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D3790_19630 9b4f3ca2b80f82b17d3f04d88c97f808 424 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 2 420 2.1E-205 T 01-11-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 D3790_19630 9b4f3ca2b80f82b17d3f04d88c97f808 424 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D3790_19630 9b4f3ca2b80f82b17d3f04d88c97f808 424 SUPERFAMILY SSF53383 1 421 1.71E-133 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_19630 9b4f3ca2b80f82b17d3f04d88c97f808 424 PIRSF PIRSF001434 1 424 3.2E-133 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D3790_19630 9b4f3ca2b80f82b17d3f04d88c97f808 424 Gene3D G3DSA:3.90.1150.10 289 424 2.4E-53 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_19630 9b4f3ca2b80f82b17d3f04d88c97f808 424 Gene3D G3DSA:3.40.640.10 1 285 8.3E-106 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_03765 8ca32d93c6613e6af197db975e11a46f 350 Pfam PF00793 DAHP synthetase I family 39 338 1.5E-110 T 01-11-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 D3790_03765 8ca32d93c6613e6af197db975e11a46f 350 PIRSF PIRSF001361 1 350 2.8E-164 T 01-11-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 D3790_03765 8ca32d93c6613e6af197db975e11a46f 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 1.8E-175 T 01-11-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 D3790_03765 8ca32d93c6613e6af197db975e11a46f 350 Gene3D G3DSA:3.20.20.70 1 350 2.8E-168 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_03765 8ca32d93c6613e6af197db975e11a46f 350 SUPERFAMILY SSF51569 7 348 8.24E-137 T 01-11-2018 D3790_02845 7bfd25bffd411ce8084cc666e3874967 560 Pfam PF05199 GMC oxidoreductase 393 527 2.4E-41 T 01-11-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 D3790_02845 7bfd25bffd411ce8084cc666e3874967 560 Gene3D G3DSA:1.10.1220.110 97 151 3.6E-173 T 01-11-2018 D3790_02845 7bfd25bffd411ce8084cc666e3874967 560 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 01-11-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 D3790_02845 7bfd25bffd411ce8084cc666e3874967 560 Gene3D G3DSA:4.10.450.10 36 199 3.6E-173 T 01-11-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 D3790_02845 7bfd25bffd411ce8084cc666e3874967 560 SUPERFAMILY SSF54373 295 477 3.63E-62 T 01-11-2018 D3790_02845 7bfd25bffd411ce8084cc666e3874967 560 PIRSF PIRSF000137 1 535 7.1E-137 T 01-11-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 D3790_02845 7bfd25bffd411ce8084cc666e3874967 560 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 1 554 59.7 T 01-11-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 D3790_02845 7bfd25bffd411ce8084cc666e3874967 560 Pfam PF00732 GMC oxidoreductase 3 300 9.1E-93 T 01-11-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 D3790_02845 7bfd25bffd411ce8084cc666e3874967 560 TIGRFAM TIGR01810 betA: choline dehydrogenase 4 537 1.7E-275 T 01-11-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 D3790_02845 7bfd25bffd411ce8084cc666e3874967 560 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 259 273 - T 01-11-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 D3790_02845 7bfd25bffd411ce8084cc666e3874967 560 SUPERFAMILY SSF51905 2 535 1.44E-81 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_02845 7bfd25bffd411ce8084cc666e3874967 560 Gene3D G3DSA:3.30.410.40 152 474 3.6E-173 T 01-11-2018 D3790_02845 7bfd25bffd411ce8084cc666e3874967 560 Gene3D G3DSA:3.50.50.60 3 531 3.6E-173 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_08120 55c12e6b1145202164f73e9ea004c9a5 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 1.8E-22 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_08120 55c12e6b1145202164f73e9ea004c9a5 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 1.8E-22 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_08120 55c12e6b1145202164f73e9ea004c9a5 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 1.8E-22 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_08120 55c12e6b1145202164f73e9ea004c9a5 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 1.8E-22 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_08120 55c12e6b1145202164f73e9ea004c9a5 145 Pfam PF01047 MarR family 29 87 1.1E-15 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_08120 55c12e6b1145202164f73e9ea004c9a5 145 Gene3D G3DSA:1.10.10.10 2 143 4.5E-34 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_08120 55c12e6b1145202164f73e9ea004c9a5 145 SUPERFAMILY SSF46785 2 138 5.68E-30 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_08120 55c12e6b1145202164f73e9ea004c9a5 145 SMART SM00347 22 123 5.1E-23 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_12105 ce1c488064ceed21185bfe17def5f1e0 407 Gene3D G3DSA:1.10.150.130 103 210 9.0E-13 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal D3790_12105 ce1c488064ceed21185bfe17def5f1e0 407 Gene3D G3DSA:3.30.160.390 5 96 2.8E-24 T 01-11-2018 IPR038488 Integrase, DNA-binding domain superfamily D3790_12105 ce1c488064ceed21185bfe17def5f1e0 407 Gene3D G3DSA:1.10.443.10 211 385 2.5E-21 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_12105 ce1c488064ceed21185bfe17def5f1e0 407 Pfam PF00589 Phage integrase family 212 373 8.6E-15 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D3790_12105 ce1c488064ceed21185bfe17def5f1e0 407 SUPERFAMILY SSF56349 106 377 8.83E-45 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_12105 ce1c488064ceed21185bfe17def5f1e0 407 Pfam PF13356 Arm DNA-binding domain 7 92 3.4E-18 T 01-11-2018 IPR025166 Integrase, DNA-binding domain D3790_11960 484b29ce3e4860907c32010e7c956f4f 436 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 96 420 5.8E-129 T 01-11-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 D3790_11960 484b29ce3e4860907c32010e7c956f4f 436 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 99 153 4.1E-6 T 01-11-2018 IPR000014 PAS domain D3790_11960 484b29ce3e4860907c32010e7c956f4f 436 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 2.1E-27 T 01-11-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 D3790_11960 484b29ce3e4860907c32010e7c956f4f 436 Gene3D G3DSA:3.30.450.20 85 199 4.8E-9 T 01-11-2018 D3790_11960 484b29ce3e4860907c32010e7c956f4f 436 Pfam PF00512 His Kinase A (phospho-acceptor) domain 204 269 2.2E-20 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_11960 484b29ce3e4860907c32010e7c956f4f 436 Gene3D G3DSA:3.30.565.10 275 424 2.7E-34 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_11960 484b29ce3e4860907c32010e7c956f4f 436 SMART SM00387 313 425 2.0E-30 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_11960 484b29ce3e4860907c32010e7c956f4f 436 Gene3D G3DSA:1.10.287.130 200 268 2.8E-23 T 01-11-2018 D3790_11960 484b29ce3e4860907c32010e7c956f4f 436 SMART SM00091 98 164 2.0E-6 T 01-11-2018 IPR000014 PAS domain D3790_11960 484b29ce3e4860907c32010e7c956f4f 436 SUPERFAMILY SSF55874 259 421 9.95E-37 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_11960 484b29ce3e4860907c32010e7c956f4f 436 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 421 7.0E-21 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_11960 484b29ce3e4860907c32010e7c956f4f 436 SUPERFAMILY SSF47384 191 269 8.04E-20 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D3790_11960 484b29ce3e4860907c32010e7c956f4f 436 SMART SM00388 203 269 1.0E-24 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_11960 484b29ce3e4860907c32010e7c956f4f 436 Pfam PF00989 PAS fold 99 169 4.1E-8 T 01-11-2018 IPR013767 PAS fold GO:0006355 D3790_11960 484b29ce3e4860907c32010e7c956f4f 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 5.9E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_11960 484b29ce3e4860907c32010e7c956f4f 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 5.9E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_11960 484b29ce3e4860907c32010e7c956f4f 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 5.9E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_11960 484b29ce3e4860907c32010e7c956f4f 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 5.9E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_11960 484b29ce3e4860907c32010e7c956f4f 436 SUPERFAMILY SSF55785 87 195 5.23E-10 T 01-11-2018 IPR035965 PAS domain superfamily D3790_15490 b03139a332e65101bb3a1f9d28075cca 535 Gene3D G3DSA:1.20.1260.30 5 204 7.5E-56 T 01-11-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily D3790_15490 b03139a332e65101bb3a1f9d28075cca 535 Gene3D G3DSA:3.40.50.150 208 484 9.8E-86 T 01-11-2018 D3790_15490 b03139a332e65101bb3a1f9d28075cca 535 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 308 314 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D3790_15490 b03139a332e65101bb3a1f9d28075cca 535 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 11 509 7.1E-139 T 01-11-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 D3790_15490 b03139a332e65101bb3a1f9d28075cca 535 Pfam PF02384 N-6 DNA Methylase 186 490 4.3E-109 T 01-11-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 D3790_15490 b03139a332e65101bb3a1f9d28075cca 535 SUPERFAMILY SSF53335 11 527 4.34E-132 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_15490 b03139a332e65101bb3a1f9d28075cca 535 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 236 250 5.3E-23 T 01-11-2018 D3790_15490 b03139a332e65101bb3a1f9d28075cca 535 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 341 365 5.3E-23 T 01-11-2018 D3790_15490 b03139a332e65101bb3a1f9d28075cca 535 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 210 226 5.3E-23 T 01-11-2018 D3790_15490 b03139a332e65101bb3a1f9d28075cca 535 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 305 317 5.3E-23 T 01-11-2018 D3790_15490 b03139a332e65101bb3a1f9d28075cca 535 Pfam PF12161 HsdM N-terminal domain 13 174 1.6E-18 T 01-11-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain D3790_18970 4a9f074ac79d0606f6b9f47799c902ea 89 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 49 2.4E-22 T 01-11-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 D3790_18970 4a9f074ac79d0606f6b9f47799c902ea 89 Pfam PF02416 mttA/Hcf106 family 4 56 1.7E-15 T 01-11-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 D3790_18970 4a9f074ac79d0606f6b9f47799c902ea 89 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 87 24.093 T 01-11-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 SUPERFAMILY SSF100920 384 540 4.19E-59 T 01-11-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 1.4E-287 T 01-11-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 Pfam PF00012 Hsp70 protein 4 601 8.2E-263 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 01-11-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 SUPERFAMILY SSF100934 535 606 1.61E-5 T 01-11-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 Gene3D G3DSA:1.20.1270.10 524 603 9.3E-26 T 01-11-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 PRINTS PR00301 70kDa heat shock protein signature 469 485 2.7E-80 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 PRINTS PR00301 70kDa heat shock protein signature 138 158 2.7E-80 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 PRINTS PR00301 70kDa heat shock protein signature 198 208 2.7E-80 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 PRINTS PR00301 70kDa heat shock protein signature 365 385 2.7E-80 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.7E-80 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.7E-80 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.7E-80 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 PRINTS PR00301 70kDa heat shock protein signature 334 350 2.7E-80 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 PRINTS PR00301 70kDa heat shock protein signature 388 407 2.7E-80 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 Gene3D G3DSA:3.30.420.40 180 366 2.7E-171 T 01-11-2018 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 01-11-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 Gene3D G3DSA:3.90.640.10 229 316 2.7E-171 T 01-11-2018 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 SUPERFAMILY SSF53067 187 382 2.14E-67 T 01-11-2018 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 SUPERFAMILY SSF53067 4 183 1.76E-65 T 01-11-2018 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.558 T 01-11-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 Gene3D G3DSA:3.30.420.40 5 379 2.7E-171 T 01-11-2018 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 01-11-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 D3790_12540 4810377e3018853f9c37ae8e48017c08 636 Gene3D G3DSA:2.60.34.10 383 523 6.9E-65 T 01-11-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 D3790_19095 aa9715c89a1725e1c27288c0cbe28203 244 PIRSF PIRSF000857 3 244 3.9E-55 T 01-11-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 D3790_19095 aa9715c89a1725e1c27288c0cbe28203 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 38.888 T 01-11-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 D3790_19095 aa9715c89a1725e1c27288c0cbe28203 244 Gene3D G3DSA:3.40.50.620 3 216 1.2E-62 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_19095 aa9715c89a1725e1c27288c0cbe28203 244 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 21 242 1.2E-93 T 01-11-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 D3790_19095 aa9715c89a1725e1c27288c0cbe28203 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 1.0E-86 T 01-11-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 D3790_19095 aa9715c89a1725e1c27288c0cbe28203 244 SUPERFAMILY SSF52402 22 208 6.28E-54 T 01-11-2018 D3790_19095 aa9715c89a1725e1c27288c0cbe28203 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 4.3E-51 T 01-11-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 D3790_09745 031665e0eb0f1f3e40729d2d365982f3 710 Gene3D G3DSA:3.40.50.150 488 706 5.6E-74 T 01-11-2018 D3790_09745 031665e0eb0f1f3e40729d2d365982f3 710 PIRSF PIRSF037618 1 707 5.6E-300 T 01-11-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 D3790_09745 031665e0eb0f1f3e40729d2d365982f3 710 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 32.477 T 01-11-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 D3790_09745 031665e0eb0f1f3e40729d2d365982f3 710 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 7.8E-62 T 01-11-2018 IPR000241 Putative RNA methylase domain D3790_09745 031665e0eb0f1f3e40729d2d365982f3 710 Gene3D G3DSA:3.30.750.80 396 487 1.2E-35 T 01-11-2018 D3790_09745 031665e0eb0f1f3e40729d2d365982f3 710 Gene3D G3DSA:3.30.2130.30 5 255 4.0E-145 T 01-11-2018 D3790_09745 031665e0eb0f1f3e40729d2d365982f3 710 Gene3D G3DSA:3.40.50.150 169 372 4.0E-145 T 01-11-2018 D3790_09745 031665e0eb0f1f3e40729d2d365982f3 710 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 01-11-2018 IPR000241 Putative RNA methylase domain D3790_09745 031665e0eb0f1f3e40729d2d365982f3 710 SMART SM00981 56 154 7.4E-22 T 01-11-2018 IPR004114 THUMP domain GO:0003723 D3790_09745 031665e0eb0f1f3e40729d2d365982f3 710 SUPERFAMILY SSF53335 400 705 9.44E-66 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_09745 031665e0eb0f1f3e40729d2d365982f3 710 SUPERFAMILY SSF53335 144 373 2.25E-39 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_09745 031665e0eb0f1f3e40729d2d365982f3 710 Pfam PF02926 THUMP domain 23 153 3.6E-15 T 01-11-2018 IPR004114 THUMP domain GO:0003723 D3790_09745 031665e0eb0f1f3e40729d2d365982f3 710 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D3790_09745 031665e0eb0f1f3e40729d2d365982f3 710 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 477 673 1.8E-21 T 01-11-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 D3790_01335 2bfb76ce1142c8b743fd82a22e3f9f49 209 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 177 209 2.5E-9 T 01-11-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D3790_01335 2bfb76ce1142c8b743fd82a22e3f9f49 209 PIRSF PIRSF000190 1 209 5.8E-45 T 01-11-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D3790_01335 2bfb76ce1142c8b743fd82a22e3f9f49 209 SUPERFAMILY SSF50475 8 209 4.13E-40 T 01-11-2018 D3790_01335 2bfb76ce1142c8b743fd82a22e3f9f49 209 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 43 117 5.2E-11 T 01-11-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D3790_01335 2bfb76ce1142c8b743fd82a22e3f9f49 209 Gene3D G3DSA:2.30.110.10 2 209 2.7E-47 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 D3790_07430 ba9195603419427be9bb9c4239fa09a8 335 SUPERFAMILY SSF46785 260 330 3.74E-25 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_07430 ba9195603419427be9bb9c4239fa09a8 335 SMART SM00382 54 181 3.0E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_07430 ba9195603419427be9bb9c4239fa09a8 335 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 335 2.0E-37 T 01-11-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 D3790_07430 ba9195603419427be9bb9c4239fa09a8 335 Gene3D G3DSA:1.10.10.10 260 335 1.2E-32 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_07430 ba9195603419427be9bb9c4239fa09a8 335 Gene3D G3DSA:3.40.50.300 23 184 5.4E-39 T 01-11-2018 D3790_07430 ba9195603419427be9bb9c4239fa09a8 335 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 7.4E-148 T 01-11-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 D3790_07430 ba9195603419427be9bb9c4239fa09a8 335 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 5.2E-117 T 01-11-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 D3790_07430 ba9195603419427be9bb9c4239fa09a8 335 SUPERFAMILY SSF52540 23 255 9.25E-54 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_07430 ba9195603419427be9bb9c4239fa09a8 335 Gene3D G3DSA:1.10.8.60 185 258 5.3E-30 T 01-11-2018 D3790_07430 ba9195603419427be9bb9c4239fa09a8 335 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 3.6E-33 T 01-11-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 D3790_07430 ba9195603419427be9bb9c4239fa09a8 335 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 335 182.364 T 01-11-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 D3790_08225 a0338d77092aaff889a8b99966fc0c38 797 SUPERFAMILY SSF52009 351 470 9.55E-35 T 01-11-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 D3790_08225 a0338d77092aaff889a8b99966fc0c38 797 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 353 2.9E-118 T 01-11-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 D3790_08225 a0338d77092aaff889a8b99966fc0c38 797 SUPERFAMILY SSF51621 464 793 3.14E-95 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D3790_08225 a0338d77092aaff889a8b99966fc0c38 797 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 484 790 3.9E-60 T 01-11-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 D3790_08225 a0338d77092aaff889a8b99966fc0c38 797 Gene3D G3DSA:3.30.470.20 199 360 2.7E-59 T 01-11-2018 D3790_08225 a0338d77092aaff889a8b99966fc0c38 797 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 697 715 - T 01-11-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 D3790_08225 a0338d77092aaff889a8b99966fc0c38 797 Gene3D G3DSA:3.20.20.60 481 793 1.9E-98 T 01-11-2018 D3790_08225 a0338d77092aaff889a8b99966fc0c38 797 SUPERFAMILY SSF56059 9 387 1.29E-106 T 01-11-2018 D3790_08225 a0338d77092aaff889a8b99966fc0c38 797 PIRSF PIRSF000854 7 797 0.0 T 01-11-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 D3790_08225 a0338d77092aaff889a8b99966fc0c38 797 Pfam PF00391 PEP-utilising enzyme, mobile domain 388 458 4.2E-26 T 01-11-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 D3790_08225 a0338d77092aaff889a8b99966fc0c38 797 Gene3D G3DSA:3.50.30.10 375 480 1.6E-41 T 01-11-2018 D3790_08225 a0338d77092aaff889a8b99966fc0c38 797 Gene3D G3DSA:3.30.1490.20 8 198 3.0E-70 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D3790_08225 a0338d77092aaff889a8b99966fc0c38 797 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 790 0.0 T 01-11-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 D3790_08225 a0338d77092aaff889a8b99966fc0c38 797 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 417 428 - T 01-11-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 D3790_03910 64e83e541d8c3cc461c0fc300a64d83f 368 Gene3D G3DSA:3.40.1710.10 40 162 3.7E-5 T 01-11-2018 D3790_03910 64e83e541d8c3cc461c0fc300a64d83f 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 2.6E-7 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 D3790_03910 64e83e541d8c3cc461c0fc300a64d83f 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 2.6E-7 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 D3790_03910 64e83e541d8c3cc461c0fc300a64d83f 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 2.6E-7 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 D3790_03910 64e83e541d8c3cc461c0fc300a64d83f 368 Pfam PF12698 ABC-2 family transporter protein 26 360 7.5E-48 T 01-11-2018 D3790_11535 1eaff18960bb28d4d914fd906b5cc7c8 135 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 1.7E-56 T 01-11-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 D3790_11535 1eaff18960bb28d4d914fd906b5cc7c8 135 Gene3D G3DSA:1.10.1660.10 2 110 3.0E-30 T 01-11-2018 D3790_11535 1eaff18960bb28d4d914fd906b5cc7c8 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.4E-6 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D3790_11535 1eaff18960bb28d4d914fd906b5cc7c8 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.4E-6 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D3790_11535 1eaff18960bb28d4d914fd906b5cc7c8 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 3.4E-6 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D3790_11535 1eaff18960bb28d4d914fd906b5cc7c8 135 SMART SM00422 1 70 3.8E-27 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D3790_11535 1eaff18960bb28d4d914fd906b5cc7c8 135 SUPERFAMILY SSF46955 1 126 3.0E-32 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily D3790_11535 1eaff18960bb28d4d914fd906b5cc7c8 135 Pfam PF13411 MerR HTH family regulatory protein 1 68 8.9E-18 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D3790_01010 d23c737adc1db4c4c230fcfa8fb8c261 408 Gene3D G3DSA:2.40.30.10 127 265 2.7E-51 T 01-11-2018 D3790_01010 d23c737adc1db4c4c230fcfa8fb8c261 408 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 2 408 63.193 T 01-11-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 D3790_01010 d23c737adc1db4c4c230fcfa8fb8c261 408 PIRSF PIRSF000044 1 408 1.5E-220 T 01-11-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 D3790_01010 d23c737adc1db4c4c230fcfa8fb8c261 408 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 41 115 4.2E-11 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 D3790_01010 d23c737adc1db4c4c230fcfa8fb8c261 408 Pfam PF00175 Oxidoreductase NAD-binding domain 278 387 1.6E-17 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 D3790_01010 d23c737adc1db4c4c230fcfa8fb8c261 408 Gene3D G3DSA:3.40.50.80 276 394 1.1E-32 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3790_01010 d23c737adc1db4c4c230fcfa8fb8c261 408 Pfam PF00970 Oxidoreductase FAD-binding domain 205 267 2.0E-8 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 D3790_01010 d23c737adc1db4c4c230fcfa8fb8c261 408 SUPERFAMILY SSF63380 106 273 1.42E-35 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel D3790_01010 d23c737adc1db4c4c230fcfa8fb8c261 408 SUPERFAMILY SSF54292 41 125 2.42E-22 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D3790_01010 d23c737adc1db4c4c230fcfa8fb8c261 408 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 4 408 3.0E-231 T 01-11-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 D3790_01010 d23c737adc1db4c4c230fcfa8fb8c261 408 SUPERFAMILY SSF52343 258 404 1.13E-37 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3790_01010 d23c737adc1db4c4c230fcfa8fb8c261 408 Gene3D G3DSA:3.10.20.30 35 126 7.9E-31 T 01-11-2018 IPR012675 Beta-grasp domain superfamily D3790_07265 1662434c15deb152f1fe807c30932228 1516 Pfam PF12256 Insecticide toxin TcdB middle/N-terminal region 670 837 6.3E-27 T 01-11-2018 IPR022045 Insecticide toxin TcdB middle/N-terminal D3790_07265 1662434c15deb152f1fe807c30932228 1516 SUPERFAMILY SSF69318 470 686 1.09E-14 T 01-11-2018 D3790_07265 1662434c15deb152f1fe807c30932228 1516 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 32 326 2.2E-97 T 01-11-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 D3790_07265 1662434c15deb152f1fe807c30932228 1516 Pfam PF12255 Insecticide toxin TcdB middle/C-terminal region 885 1030 3.1E-53 T 01-11-2018 IPR022044 Insecticide toxin TcdB middle/C-terminal D3790_07265 1662434c15deb152f1fe807c30932228 1516 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 198 216 1.1E-36 T 01-11-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 D3790_07265 1662434c15deb152f1fe807c30932228 1516 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 308 326 1.1E-36 T 01-11-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 D3790_07265 1662434c15deb152f1fe807c30932228 1516 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 275 294 1.1E-36 T 01-11-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 D3790_07265 1662434c15deb152f1fe807c30932228 1516 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 88 104 1.1E-36 T 01-11-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 D3790_07265 1662434c15deb152f1fe807c30932228 1516 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 29 50 1.1E-36 T 01-11-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 D3790_07775 955ea213d6f11bfcd59f3acb344aa774 362 Gene3D G3DSA:1.10.10.10 2 57 1.6E-10 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_07775 955ea213d6f11bfcd59f3acb344aa774 362 Gene3D G3DSA:3.40.1190.20 58 362 4.4E-73 T 01-11-2018 IPR029056 Ribokinase-like D3790_07775 955ea213d6f11bfcd59f3acb344aa774 362 Pfam PF00294 pfkB family carbohydrate kinase 58 348 4.5E-58 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB D3790_07775 955ea213d6f11bfcd59f3acb344aa774 362 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 48 9.4E-10 T 01-11-2018 D3790_07775 955ea213d6f11bfcd59f3acb344aa774 362 SUPERFAMILY SSF46785 2 55 5.82E-9 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_07775 955ea213d6f11bfcd59f3acb344aa774 362 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 93 117 - T 01-11-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 D3790_07775 955ea213d6f11bfcd59f3acb344aa774 362 SUPERFAMILY SSF53613 61 353 4.37E-57 T 01-11-2018 IPR029056 Ribokinase-like D3790_14515 1b3812185aebb9c5e87caea83a015d88 732 Pfam PF00271 Helicase conserved C-terminal domain 522 589 1.5E-5 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_14515 1b3812185aebb9c5e87caea83a015d88 732 Pfam PF00270 DEAD/DEAH box helicase 220 363 1.7E-13 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D3790_14515 1b3812185aebb9c5e87caea83a015d88 732 Gene3D G3DSA:3.40.50.300 184 379 1.8E-79 T 01-11-2018 D3790_14515 1b3812185aebb9c5e87caea83a015d88 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 732 25.479 T 01-11-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 D3790_14515 1b3812185aebb9c5e87caea83a015d88 732 SMART SM00490 492 589 8.5E-9 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_14515 1b3812185aebb9c5e87caea83a015d88 732 SMART SM00487 195 395 1.1E-13 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_14515 1b3812185aebb9c5e87caea83a015d88 732 TIGRFAM TIGR00595 priA: primosomal protein N' 221 729 3.4E-204 T 01-11-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 D3790_14515 1b3812185aebb9c5e87caea83a015d88 732 Gene3D G3DSA:1.10.8.630 2 112 3.5E-38 T 01-11-2018 D3790_14515 1b3812185aebb9c5e87caea83a015d88 732 SUPERFAMILY SSF52540 219 601 2.54E-39 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_17870 1e427d4a09d417066af2cc18260a3c2b 809 Gene3D G3DSA:1.10.10.10 704 802 1.3E-36 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_17870 1e427d4a09d417066af2cc18260a3c2b 809 SMART SM00778 46 85 2.3E-9 T 01-11-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 D3790_17870 1e427d4a09d417066af2cc18260a3c2b 809 Gene3D G3DSA:3.40.50.300 495 667 1.5E-7 T 01-11-2018 D3790_17870 1e427d4a09d417066af2cc18260a3c2b 809 Pfam PF03288 Poxvirus D5 protein-like 705 799 1.9E-17 T 01-11-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal D3790_17870 1e427d4a09d417066af2cc18260a3c2b 809 SUPERFAMILY SSF52540 512 672 4.25E-10 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_17870 1e427d4a09d417066af2cc18260a3c2b 809 SUPERFAMILY SSF57783 43 115 7.48E-10 T 01-11-2018 D3790_17870 1e427d4a09d417066af2cc18260a3c2b 809 SMART SM00885 370 496 6.1E-9 T 01-11-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal D3790_17870 1e427d4a09d417066af2cc18260a3c2b 809 Pfam PF08706 D5 N terminal like 372 498 4.4E-8 T 01-11-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal D3790_17870 1e427d4a09d417066af2cc18260a3c2b 809 Pfam PF08273 Zinc-binding domain of primase-helicase 46 85 6.1E-10 T 01-11-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 D3790_17870 1e427d4a09d417066af2cc18260a3c2b 809 Pfam PF13362 Toprim domain 215 322 5.5E-12 T 01-11-2018 IPR006171 TOPRIM domain D3790_17870 1e427d4a09d417066af2cc18260a3c2b 809 SUPERFAMILY SSF46785 705 802 7.07E-36 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_17870 1e427d4a09d417066af2cc18260a3c2b 809 Gene3D G3DSA:3.40.1360.10 203 332 2.1E-6 T 01-11-2018 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 SUPERFAMILY SSF57783 703 743 8.67E-7 T 01-11-2018 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 1.4E-36 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 490 504 1.4E-36 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 390 406 1.4E-36 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 106 119 1.4E-36 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 1.4E-36 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 732 54.183 T 01-11-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 Gene3D G3DSA:3.30.65.10 701 744 1.7E-5 T 01-11-2018 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 Gene3D G3DSA:3.30.65.10 745 807 6.2E-32 T 01-11-2018 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 SUPERFAMILY SSF57783 809 864 1.12E-21 T 01-11-2018 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 758 793 3.9E-12 T 01-11-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 824 863 1.7E-18 T 01-11-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 SUPERFAMILY SSF57783 744 807 3.23E-19 T 01-11-2018 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 SUPERFAMILY SSF57783 587 623 7.65E-7 T 01-11-2018 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 309 323 - T 01-11-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 SMART SM00437 272 527 6.1E-120 T 01-11-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 Gene3D G3DSA:2.70.20.10 213 473 5.4E-164 T 01-11-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 Pfam PF01751 Toprim domain 5 142 5.3E-33 T 01-11-2018 IPR006171 TOPRIM domain D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 597 622 0.0029 T 01-11-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 709 745 2.6E-12 T 01-11-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 Gene3D G3DSA:3.40.50.140 1 163 8.3E-68 T 01-11-2018 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 Gene3D G3DSA:1.10.290.10 280 404 5.4E-164 T 01-11-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 Gene3D G3DSA:2.20.25.10 808 865 1.6E-27 T 01-11-2018 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 SMART SM00436 133 221 1.1E-47 T 01-11-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 Gene3D G3DSA:1.10.460.10 165 571 5.4E-164 T 01-11-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 633 1.9E-251 T 01-11-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 Pfam PF01131 DNA topoisomerase 157 565 1.5E-126 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 SMART SM00493 3 132 1.2E-32 T 01-11-2018 IPR006171 TOPRIM domain D3790_06470 1d85bcc2dd0bfc25e35a81688b66c63a 865 SUPERFAMILY SSF56712 3 608 4.45E-200 T 01-11-2018 IPR023405 DNA topoisomerase, type IA, core domain D3790_02405 4ee5a6fb787517886237d3471ba8c3b2 783 SUPERFAMILY SSF56601 206 645 3.62E-92 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like D3790_02405 4ee5a6fb787517886237d3471ba8c3b2 783 Pfam PF00912 Transglycosylase 59 224 9.8E-51 T 01-11-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_02405 4ee5a6fb787517886237d3471ba8c3b2 783 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 699 780 5.3E-13 T 01-11-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_02405 4ee5a6fb787517886237d3471ba8c3b2 783 Gene3D G3DSA:3.40.710.10 248 618 6.2E-68 T 01-11-2018 D3790_02405 4ee5a6fb787517886237d3471ba8c3b2 783 Gene3D G3DSA:1.10.3810.10 53 247 7.1E-55 T 01-11-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_02405 4ee5a6fb787517886237d3471ba8c3b2 783 SUPERFAMILY SSF53955 35 257 2.81E-64 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily D3790_02405 4ee5a6fb787517886237d3471ba8c3b2 783 Pfam PF00905 Penicillin binding protein transpeptidase domain 301 524 2.0E-13 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 D3790_02405 4ee5a6fb787517886237d3471ba8c3b2 783 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 37 780 2.5E-245 T 01-11-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_01880 b535630bc2be74b7f40db158121e0802 635 Gene3D G3DSA:3.20.20.70 345 634 4.1E-45 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_01880 b535630bc2be74b7f40db158121e0802 635 SUPERFAMILY SSF53613 5 330 1.71E-71 T 01-11-2018 IPR029056 Ribokinase-like D3790_01880 b535630bc2be74b7f40db158121e0802 635 Gene3D G3DSA:3.40.1190.20 10 313 4.2E-93 T 01-11-2018 IPR029056 Ribokinase-like D3790_01880 b535630bc2be74b7f40db158121e0802 635 Pfam PF00294 pfkB family carbohydrate kinase 8 323 2.8E-46 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB D3790_01880 b535630bc2be74b7f40db158121e0802 635 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 275 288 - T 01-11-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 D3790_01880 b535630bc2be74b7f40db158121e0802 635 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 6 331 3.8E-128 T 01-11-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 D3790_01880 b535630bc2be74b7f40db158121e0802 635 Gene3D G3DSA:2.20.150.10 15 110 4.2E-93 T 01-11-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 D3790_01880 b535630bc2be74b7f40db158121e0802 635 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 326 633 1.7E-135 T 01-11-2018 IPR018659 Protein of unknown function DUF2090 D3790_15470 bb96339d8198ed3e300557ade5ea4928 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 01-11-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D3790_15470 bb96339d8198ed3e300557ade5ea4928 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 8.3E-20 T 01-11-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D3790_15470 bb96339d8198ed3e300557ade5ea4928 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 56.97 T 01-11-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 D3790_15470 bb96339d8198ed3e300557ade5ea4928 460 Gene3D G3DSA:1.10.1140.10 345 460 1.3E-60 T 01-11-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D3790_15470 bb96339d8198ed3e300557ade5ea4928 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 3.0E-262 T 01-11-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 D3790_15470 bb96339d8198ed3e300557ade5ea4928 460 SUPERFAMILY SSF47917 345 459 2.07E-55 T 01-11-2018 D3790_15470 bb96339d8198ed3e300557ade5ea4928 460 Gene3D G3DSA:2.40.10.170 2 75 1.1E-30 T 01-11-2018 D3790_15470 bb96339d8198ed3e300557ade5ea4928 460 SMART SM00382 142 405 2.7E-4 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_15470 bb96339d8198ed3e300557ade5ea4928 460 Gene3D G3DSA:3.40.50.300 76 344 8.5E-113 T 01-11-2018 D3790_15470 bb96339d8198ed3e300557ade5ea4928 460 SUPERFAMILY SSF50615 1 75 2.88E-25 T 01-11-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D3790_15470 bb96339d8198ed3e300557ade5ea4928 460 SUPERFAMILY SSF52540 77 348 1.01E-89 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_15470 bb96339d8198ed3e300557ade5ea4928 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 5.0E-63 T 01-11-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D3790_11880 a2ef77016244e96ef629a98113bc14b0 347 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 322 28.813 T 01-11-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 D3790_11880 a2ef77016244e96ef629a98113bc14b0 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 4.2E-21 T 01-11-2018 IPR016188 PurM-like, N-terminal domain D3790_11880 a2ef77016244e96ef629a98113bc14b0 347 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 1.1E-114 T 01-11-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 D3790_11880 a2ef77016244e96ef629a98113bc14b0 347 PIRSF PIRSF005303 1 322 2.2E-88 T 01-11-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 D3790_11880 a2ef77016244e96ef629a98113bc14b0 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 301 8.3E-10 T 01-11-2018 IPR010918 PurM-like, C-terminal domain D3790_11880 a2ef77016244e96ef629a98113bc14b0 347 SUPERFAMILY SSF55326 4 138 3.84E-33 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily D3790_11880 a2ef77016244e96ef629a98113bc14b0 347 SUPERFAMILY SSF56042 143 305 4.34E-41 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily D3790_11880 a2ef77016244e96ef629a98113bc14b0 347 Gene3D G3DSA:3.30.1330.10 2 144 4.3E-44 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily D3790_11880 a2ef77016244e96ef629a98113bc14b0 347 Gene3D G3DSA:3.90.650.10 146 323 7.6E-58 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily D3790_03050 beb526310d0501d1257adeee7df54c6b 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 01-11-2018 IPR028299 ClpA/B, conserved site 2 D3790_03050 beb526310d0501d1257adeee7df54c6b 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 2.9E-13 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D3790_03050 beb526310d0501d1257adeee7df54c6b 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 01-11-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 D3790_03050 beb526310d0501d1257adeee7df54c6b 857 Gene3D G3DSA:3.40.50.300 550 764 3.6E-90 T 01-11-2018 D3790_03050 beb526310d0501d1257adeee7df54c6b 857 SUPERFAMILY SSF52540 159 545 5.76E-100 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_03050 beb526310d0501d1257adeee7df54c6b 857 Gene3D G3DSA:1.10.8.60 766 857 1.6E-26 T 01-11-2018 D3790_03050 beb526310d0501d1257adeee7df54c6b 857 SMART SM01086 766 855 1.6E-36 T 01-11-2018 IPR019489 Clp ATPase, C-terminal D3790_03050 beb526310d0501d1257adeee7df54c6b 857 Gene3D G3DSA:3.40.50.300 343 544 2.2E-69 T 01-11-2018 D3790_03050 beb526310d0501d1257adeee7df54c6b 857 Gene3D G3DSA:1.10.1780.10 2 147 1.8E-31 T 01-11-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 D3790_03050 beb526310d0501d1257adeee7df54c6b 857 Gene3D G3DSA:3.40.50.300 148 342 1.8E-75 T 01-11-2018 D3790_03050 beb526310d0501d1257adeee7df54c6b 857 SUPERFAMILY SSF52540 546 851 5.48E-86 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_03050 beb526310d0501d1257adeee7df54c6b 857 SMART SM00382 198 344 1.7E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_03050 beb526310d0501d1257adeee7df54c6b 857 SMART SM00382 597 752 3.2E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_03050 beb526310d0501d1257adeee7df54c6b 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 2.1E-56 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D3790_03050 beb526310d0501d1257adeee7df54c6b 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 67 2.0E-11 T 01-11-2018 IPR004176 Clp, N-terminal D3790_03050 beb526310d0501d1257adeee7df54c6b 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 3.5E-11 T 01-11-2018 IPR004176 Clp, N-terminal D3790_03050 beb526310d0501d1257adeee7df54c6b 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 6.6E-27 T 01-11-2018 IPR019489 Clp ATPase, C-terminal D3790_03050 beb526310d0501d1257adeee7df54c6b 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 2.7E-42 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 D3790_03050 beb526310d0501d1257adeee7df54c6b 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 2.7E-42 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 D3790_03050 beb526310d0501d1257adeee7df54c6b 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 2.7E-42 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 D3790_03050 beb526310d0501d1257adeee7df54c6b 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 2.7E-42 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 D3790_03050 beb526310d0501d1257adeee7df54c6b 857 SUPERFAMILY SSF81923 4 156 7.26E-42 T 01-11-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 D3790_03050 beb526310d0501d1257adeee7df54c6b 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 01-11-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 D3790_01425 161a2964ddc7098134b28fd50a38173d 590 Gene3D G3DSA:2.60.40.1250 22 159 4.1E-43 T 01-11-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily D3790_01425 161a2964ddc7098134b28fd50a38173d 590 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 2 588 38.0 T 01-11-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 D3790_01425 161a2964ddc7098134b28fd50a38173d 590 SUPERFAMILY SSF52833 469 586 6.61E-25 T 01-11-2018 IPR036249 Thioredoxin-like superfamily D3790_01425 161a2964ddc7098134b28fd50a38173d 590 Gene3D G3DSA:3.40.30.10 463 590 3.5E-35 T 01-11-2018 D3790_01425 161a2964ddc7098134b28fd50a38173d 590 ProSitePatterns PS00194 Thioredoxin family active site. 496 514 - T 01-11-2018 IPR017937 Thioredoxin, conserved site GO:0045454 D3790_01425 161a2964ddc7098134b28fd50a38173d 590 Pfam PF13098 Thioredoxin-like domain 488 583 7.3E-11 T 01-11-2018 IPR012336 Thioredoxin-like fold D3790_01425 161a2964ddc7098134b28fd50a38173d 590 SUPERFAMILY SSF74863 33 145 3.27E-38 T 01-11-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily D3790_01425 161a2964ddc7098134b28fd50a38173d 590 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 194 400 6.7E-22 T 01-11-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 D3790_01425 161a2964ddc7098134b28fd50a38173d 590 Pfam PF11412 Disulphide bond corrector protein DsbC 35 141 1.5E-30 T 01-11-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain D3790_16305 751753fa8e68a320122fefcd689dce15 231 Gene3D G3DSA:3.30.420.10 69 204 6.3E-6 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_16305 751753fa8e68a320122fefcd689dce15 231 Pfam PF13610 DDE domain 75 211 1.1E-47 T 01-11-2018 IPR032874 DDE domain D3790_16305 751753fa8e68a320122fefcd689dce15 231 SUPERFAMILY SSF53098 74 193 4.74E-11 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_19290 912d4fe75f5999044e13a831722845eb 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 529 0.0 T 01-11-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 D3790_19290 912d4fe75f5999044e13a831722845eb 529 Gene3D G3DSA:3.30.70.3280 390 529 4.2E-51 T 01-11-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily D3790_19290 912d4fe75f5999044e13a831722845eb 529 SUPERFAMILY SSF54980 393 468 1.19E-16 T 01-11-2018 IPR035647 EF-G domain III/V-like D3790_19290 912d4fe75f5999044e13a831722845eb 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 153 7.9E-19 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D3790_19290 912d4fe75f5999044e13a831722845eb 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_19290 912d4fe75f5999044e13a831722845eb 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_19290 912d4fe75f5999044e13a831722845eb 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_19290 912d4fe75f5999044e13a831722845eb 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_19290 912d4fe75f5999044e13a831722845eb 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_19290 912d4fe75f5999044e13a831722845eb 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 1.6E-46 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_19290 912d4fe75f5999044e13a831722845eb 529 SUPERFAMILY SSF50447 262 393 3.3E-27 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily D3790_19290 912d4fe75f5999044e13a831722845eb 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site D3790_19290 912d4fe75f5999044e13a831722845eb 529 Gene3D G3DSA:3.40.50.300 72 379 1.3E-116 T 01-11-2018 D3790_19290 912d4fe75f5999044e13a831722845eb 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.417 T 01-11-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 D3790_19290 912d4fe75f5999044e13a831722845eb 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 2.2E-9 T 01-11-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 D3790_19290 912d4fe75f5999044e13a831722845eb 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 1.5E-45 T 01-11-2018 IPR032090 Peptide chain release factor 3, C-terminal D3790_19290 912d4fe75f5999044e13a831722845eb 529 SUPERFAMILY SSF52540 10 277 5.96E-86 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_19290 912d4fe75f5999044e13a831722845eb 529 Gene3D G3DSA:3.40.50.300 110 275 1.3E-116 T 01-11-2018 D3790_16420 dd18ef3cb7230ad97e15651ff7807982 258 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 11 252 7.0E-102 T 01-11-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 D3790_16420 dd18ef3cb7230ad97e15651ff7807982 258 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 47.101 T 01-11-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 D3790_16420 dd18ef3cb7230ad97e15651ff7807982 258 Pfam PF00561 alpha/beta hydrolase fold 16 242 6.9E-22 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_16420 dd18ef3cb7230ad97e15651ff7807982 258 SUPERFAMILY SSF53474 3 252 4.24E-47 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_16420 dd18ef3cb7230ad97e15651ff7807982 258 Gene3D G3DSA:3.40.50.1820 1 256 1.4E-70 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_13785 3fd534ec401bb9d8a49441619f25fca5 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 13 274 2.5E-75 T 01-11-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 D3790_13785 3fd534ec401bb9d8a49441619f25fca5 724 Gene3D G3DSA:3.40.50.300 284 639 1.2E-136 T 01-11-2018 D3790_13785 3fd534ec401bb9d8a49441619f25fca5 724 Pfam PF13361 UvrD-like helicase C-terminal domain 280 619 5.5E-74 T 01-11-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 D3790_13785 3fd534ec401bb9d8a49441619f25fca5 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 9 721 0.0 T 01-11-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 D3790_13785 3fd534ec401bb9d8a49441619f25fca5 724 Gene3D G3DSA:1.10.486.10 385 541 1.2E-136 T 01-11-2018 D3790_13785 3fd534ec401bb9d8a49441619f25fca5 724 Gene3D G3DSA:3.40.50.300 13 277 1.7E-104 T 01-11-2018 D3790_13785 3fd534ec401bb9d8a49441619f25fca5 724 SUPERFAMILY SSF52540 9 644 1.11E-181 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_13785 3fd534ec401bb9d8a49441619f25fca5 724 Gene3D G3DSA:1.10.10.160 117 190 1.7E-104 T 01-11-2018 IPR013986 DExx box DNA helicase domain superfamily D3790_01480 ffd1990f407f818558e92fa16b34f960 56 Gene3D G3DSA:1.10.260.40 1 51 7.4E-16 T 01-11-2018 D3790_01480 ffd1990f407f818558e92fa16b34f960 56 SUPERFAMILY SSF47413 1 51 7.51E-14 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_01480 ffd1990f407f818558e92fa16b34f960 56 SMART SM00530 1 46 0.0012 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_01480 ffd1990f407f818558e92fa16b34f960 56 Pfam PF01381 Helix-turn-helix 1 46 2.2E-13 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 Pfam PF13193 AMP-binding enzyme C-terminal domain 766 855 1.5E-6 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 Gene3D G3DSA:3.40.50.12780 349 750 1.2E-127 T 01-11-2018 D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 Gene3D G3DSA:3.30.559.10 61 252 5.0E-65 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 SUPERFAMILY SSF56801 321 895 6.28E-154 T 01-11-2018 D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 SUPERFAMILY SSF52777 966 1170 2.67E-33 T 01-11-2018 D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 Pfam PF00550 Phosphopantetheine attachment site 883 946 9.2E-11 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 SUPERFAMILY SSF52777 69 315 2.0E-49 T 01-11-2018 D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 Gene3D G3DSA:3.30.559.30 65 311 5.0E-65 T 01-11-2018 D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 Gene3D G3DSA:3.30.559.30 1154 1393 3.3E-73 T 01-11-2018 D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 SUPERFAMILY SSF47336 874 947 1.83E-17 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 SUPERFAMILY SSF52777 1156 1393 7.34E-33 T 01-11-2018 D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 Gene3D G3DSA:3.30.559.10 970 1339 3.3E-73 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 380 782 2.3E-122 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 Pfam PF00668 Condensation domain 991 1392 2.8E-66 T 01-11-2018 IPR001242 Condensation domain D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 Pfam PF00668 Condensation domain 59 316 3.3E-44 T 01-11-2018 IPR001242 Condensation domain D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 ProSitePatterns PS00012 Phosphopantetheine attachment site. 906 921 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 Pfam PF00501 AMP-binding enzyme 359 758 2.0E-100 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 PIRSF PIRSF001617 1158 1400 39.0 T 01-11-2018 D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 PIRSF PIRSF001617 69 609 2.3E-22 T 01-11-2018 D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 PIRSF PIRSF001617 656 970 2.1E-45 T 01-11-2018 D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 Gene3D G3DSA:1.10.1200.10 872 952 1.8E-22 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 ProSitePatterns PS00455 Putative AMP-binding domain signature. 506 517 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07075 dc324be389f685fb4d80cd5e817fbe14 1403 Gene3D G3DSA:3.30.300.30 751 871 1.9E-30 T 01-11-2018 D3790_01560 59077b85188f63142a0d519914e5f29f 46 SUPERFAMILY SSF52540 2 40 5.73E-10 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_01560 59077b85188f63142a0d519914e5f29f 46 Gene3D G3DSA:3.40.50.300 1 41 1.9E-12 T 01-11-2018 D3790_01560 59077b85188f63142a0d519914e5f29f 46 Pfam PF13175 AAA ATPase domain 2 40 3.7E-15 T 01-11-2018 D3790_02285 ee0e4e867aa4cd8b2ee42803013f466b 532 Gene3D G3DSA:3.40.190.10 38 263 5.3E-59 T 01-11-2018 D3790_02285 ee0e4e867aa4cd8b2ee42803013f466b 532 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 309 337 - T 01-11-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 D3790_02285 ee0e4e867aa4cd8b2ee42803013f466b 532 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 266 3.5E-33 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3790_02285 ee0e4e867aa4cd8b2ee42803013f466b 532 SUPERFAMILY SSF53850 45 266 6.52E-39 T 01-11-2018 D3790_02285 ee0e4e867aa4cd8b2ee42803013f466b 532 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 467 46.636 T 01-11-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 D3790_02285 ee0e4e867aa4cd8b2ee42803013f466b 532 SMART SM00062 44 268 5.6E-29 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3790_02285 ee0e4e867aa4cd8b2ee42803013f466b 532 Gene3D G3DSA:3.40.190.10 129 224 5.3E-59 T 01-11-2018 D3790_02285 ee0e4e867aa4cd8b2ee42803013f466b 532 Pfam PF01464 Transglycosylase SLT domain 296 401 3.6E-23 T 01-11-2018 IPR008258 Transglycosylase SLT domain 1 D3790_02285 ee0e4e867aa4cd8b2ee42803013f466b 532 SUPERFAMILY SSF53955 288 452 7.5E-35 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily D3790_02285 ee0e4e867aa4cd8b2ee42803013f466b 532 Gene3D G3DSA:1.10.530.10 289 449 4.2E-34 T 01-11-2018 D3790_17980 c52c669334c5b178c73998dfc02d5c3d 217 SMART SM01207 10 185 2.6E-86 T 01-11-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 D3790_17980 c52c669334c5b178c73998dfc02d5c3d 217 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 195 2.2E-79 T 01-11-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 D3790_17980 c52c669334c5b178c73998dfc02d5c3d 217 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.988 T 01-11-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 D3790_17980 c52c669334c5b178c73998dfc02d5c3d 217 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 2.9E-52 T 01-11-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 D3790_02100 c2dfb3393daab97b53b9011004277d8c 362 Gene3D G3DSA:3.40.50.300 2 258 1.2E-78 T 01-11-2018 D3790_02100 c2dfb3393daab97b53b9011004277d8c 362 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 1.0E-120 T 01-11-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 D3790_02100 c2dfb3393daab97b53b9011004277d8c 362 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_02100 c2dfb3393daab97b53b9011004277d8c 362 SUPERFAMILY SSF50331 239 337 9.07E-10 T 01-11-2018 IPR008995 Molybdate/tungstate binding, C-terminal D3790_02100 c2dfb3393daab97b53b9011004277d8c 362 SMART SM00382 27 214 9.4E-18 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_02100 c2dfb3393daab97b53b9011004277d8c 362 Pfam PF00005 ABC transporter 18 164 3.8E-36 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_02100 c2dfb3393daab97b53b9011004277d8c 362 SUPERFAMILY SSF52540 3 243 1.36E-84 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_07400 5c97b0b1820e22ae46eb969cba92dc98 416 SUPERFAMILY SSF103473 8 399 5.89E-26 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_07400 5c97b0b1820e22ae46eb969cba92dc98 416 Gene3D G3DSA:1.20.1250.20 5 401 2.1E-22 T 01-11-2018 D3790_07400 5c97b0b1820e22ae46eb969cba92dc98 416 Pfam PF07690 Major Facilitator Superfamily 10 359 6.4E-16 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_17310 34f4e922bf4704879b8861d18bc91eb6 397 SUPERFAMILY SSF103473 13 387 7.19E-47 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_17310 34f4e922bf4704879b8861d18bc91eb6 397 Pfam PF07690 Major Facilitator Superfamily 16 270 2.1E-19 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_17310 34f4e922bf4704879b8861d18bc91eb6 397 Gene3D G3DSA:1.20.1250.20 9 381 1.1E-40 T 01-11-2018 D3790_16450 56ba60ff7f0cc95b58f7097f9cdfd111 138 SMART SM01321 14 134 2.3E-41 T 01-11-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D3790_16450 56ba60ff7f0cc95b58f7097f9cdfd111 138 SUPERFAMILY SSF143422 7 135 9.42E-47 T 01-11-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D3790_16450 56ba60ff7f0cc95b58f7097f9cdfd111 138 Gene3D G3DSA:3.30.70.1290 6 138 3.2E-42 T 01-11-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D3790_16450 56ba60ff7f0cc95b58f7097f9cdfd111 138 Pfam PF01797 Transposase IS200 like 15 134 1.7E-39 T 01-11-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D3790_08195 02f0cf32f225ebb0216f24edc3cba9cc 469 Gene3D G3DSA:2.40.33.10 71 167 8.0E-146 T 01-11-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_08195 02f0cf32f225ebb0216f24edc3cba9cc 469 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 467 5.6E-27 T 01-11-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_08195 02f0cf32f225ebb0216f24edc3cba9cc 469 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 01-11-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_08195 02f0cf32f225ebb0216f24edc3cba9cc 469 SUPERFAMILY SSF52935 323 468 6.93E-35 T 01-11-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_08195 02f0cf32f225ebb0216f24edc3cba9cc 469 SUPERFAMILY SSF50800 70 167 4.54E-29 T 01-11-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily D3790_08195 02f0cf32f225ebb0216f24edc3cba9cc 469 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 468 1.8E-187 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_08195 02f0cf32f225ebb0216f24edc3cba9cc 469 Gene3D G3DSA:3.20.20.60 4 332 8.0E-146 T 01-11-2018 D3790_08195 02f0cf32f225ebb0216f24edc3cba9cc 469 Gene3D G3DSA:3.40.1380.20 336 466 5.7E-42 T 01-11-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_08195 02f0cf32f225ebb0216f24edc3cba9cc 469 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 2.0E-152 T 01-11-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_08195 02f0cf32f225ebb0216f24edc3cba9cc 469 PRINTS PR01050 Pyruvate kinase family signature 244 268 7.1E-78 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_08195 02f0cf32f225ebb0216f24edc3cba9cc 469 PRINTS PR01050 Pyruvate kinase family signature 59 75 7.1E-78 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_08195 02f0cf32f225ebb0216f24edc3cba9cc 469 PRINTS PR01050 Pyruvate kinase family signature 294 312 7.1E-78 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_08195 02f0cf32f225ebb0216f24edc3cba9cc 469 PRINTS PR01050 Pyruvate kinase family signature 186 200 7.1E-78 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_08195 02f0cf32f225ebb0216f24edc3cba9cc 469 PRINTS PR01050 Pyruvate kinase family signature 217 243 7.1E-78 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_08195 02f0cf32f225ebb0216f24edc3cba9cc 469 PRINTS PR01050 Pyruvate kinase family signature 269 293 7.1E-78 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_08195 02f0cf32f225ebb0216f24edc3cba9cc 469 PRINTS PR01050 Pyruvate kinase family signature 313 329 7.1E-78 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_08195 02f0cf32f225ebb0216f24edc3cba9cc 469 SUPERFAMILY SSF51621 1 339 1.36E-101 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D3790_00720 323e821f31cffad7c0bcb0851340276a 826 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 135 147 2.2E-14 T 01-11-2018 D3790_00720 323e821f31cffad7c0bcb0851340276a 826 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 166 190 2.2E-14 T 01-11-2018 D3790_00720 323e821f31cffad7c0bcb0851340276a 826 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 25 41 2.2E-14 T 01-11-2018 D3790_00720 323e821f31cffad7c0bcb0851340276a 826 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 50 64 2.2E-14 T 01-11-2018 D3790_00720 323e821f31cffad7c0bcb0851340276a 826 Pfam PF06616 BsuBI/PstI restriction endonuclease C-terminus 523 824 4.6E-123 T 01-11-2018 IPR009528 Restriction endonuclease, type II, BsuBI/PstI, C-terminal GO:0000287|GO:0003677|GO:0009036|GO:0009307 D3790_00720 323e821f31cffad7c0bcb0851340276a 826 SUPERFAMILY SSF53335 16 250 4.14E-27 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_00720 323e821f31cffad7c0bcb0851340276a 826 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 138 144 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D3790_00720 323e821f31cffad7c0bcb0851340276a 826 Pfam PF07669 Eco57I restriction-modification methylase 138 230 1.1E-7 T 01-11-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 D3790_00720 323e821f31cffad7c0bcb0851340276a 826 Gene3D G3DSA:1.10.10.1820 506 665 5.8E-56 T 01-11-2018 D3790_00720 323e821f31cffad7c0bcb0851340276a 826 Gene3D G3DSA:3.40.1350.80 666 826 2.8E-62 T 01-11-2018 D3790_00720 323e821f31cffad7c0bcb0851340276a 826 Gene3D G3DSA:3.40.50.150 28 259 1.3E-26 T 01-11-2018 D3790_18215 3fcf6586eb9be77449854d581245e6ef 967 SUPERFAMILY SSF63411 266 502 1.26E-64 T 01-11-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D3790_18215 3fcf6586eb9be77449854d581245e6ef 967 SUPERFAMILY SSF63411 504 729 7.0E-39 T 01-11-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D3790_18215 3fcf6586eb9be77449854d581245e6ef 967 SUPERFAMILY SSF63411 752 956 8.1E-42 T 01-11-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D3790_18215 3fcf6586eb9be77449854d581245e6ef 967 Pfam PF16187 Middle or third domain of peptidase_M16 400 678 8.5E-53 T 01-11-2018 IPR032632 Peptidase M16, middle/third domain D3790_18215 3fcf6586eb9be77449854d581245e6ef 967 Pfam PF00675 Insulinase (Peptidase family M16) 55 174 2.4E-31 T 01-11-2018 IPR011765 Peptidase M16, N-terminal D3790_18215 3fcf6586eb9be77449854d581245e6ef 967 Gene3D G3DSA:3.30.830.10 504 885 8.1E-117 T 01-11-2018 D3790_18215 3fcf6586eb9be77449854d581245e6ef 967 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 75 98 - T 01-11-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 D3790_18215 3fcf6586eb9be77449854d581245e6ef 967 Gene3D G3DSA:3.30.830.10 25 271 8.4E-75 T 01-11-2018 D3790_18215 3fcf6586eb9be77449854d581245e6ef 967 Gene3D G3DSA:3.30.830.10 272 502 1.6E-66 T 01-11-2018 D3790_18215 3fcf6586eb9be77449854d581245e6ef 967 SUPERFAMILY SSF63411 33 262 1.45E-46 T 01-11-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D3790_18215 3fcf6586eb9be77449854d581245e6ef 967 Gene3D G3DSA:3.30.830.10 652 917 8.1E-117 T 01-11-2018 D3790_18215 3fcf6586eb9be77449854d581245e6ef 967 Pfam PF05193 Peptidase M16 inactive domain 218 392 1.3E-18 T 01-11-2018 IPR007863 Peptidase M16, C-terminal D3790_18215 3fcf6586eb9be77449854d581245e6ef 967 Pfam PF05193 Peptidase M16 inactive domain 681 858 6.8E-13 T 01-11-2018 IPR007863 Peptidase M16, C-terminal D3790_18575 eb9c9018e51bd9524fd6270c6e1ad3b3 553 Gene3D G3DSA:3.40.50.300 25 247 8.1E-23 T 01-11-2018 D3790_18575 eb9c9018e51bd9524fd6270c6e1ad3b3 553 Pfam PF03354 Phage Terminase 71 532 3.2E-90 T 01-11-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type D3790_01965 23f7a6da31829e60d2428008df633171 192 Pfam PF02342 TerD domain 1 187 6.9E-86 T 01-11-2018 IPR003325 TerD domain D3790_01965 23f7a6da31829e60d2428008df633171 192 Gene3D G3DSA:2.60.60.30 19 186 9.9E-80 T 01-11-2018 D3790_04290 e84fd127406eeb50e073aaa1223eda22 557 ProSitePatterns PS01233 Urocanase signature. 441 456 - T 01-11-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D3790_04290 e84fd127406eeb50e073aaa1223eda22 557 Gene3D G3DSA:3.40.1770.10 16 541 3.3E-262 T 01-11-2018 D3790_04290 e84fd127406eeb50e073aaa1223eda22 557 Pfam PF17391 Urocanase N-terminal domain 11 137 3.3E-63 T 01-11-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D3790_04290 e84fd127406eeb50e073aaa1223eda22 557 Pfam PF01175 Urocanase Rossmann-like domain 140 348 9.9E-86 T 01-11-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D3790_04290 e84fd127406eeb50e073aaa1223eda22 557 TIGRFAM TIGR01228 hutU: urocanate hydratase 10 553 0.0 T 01-11-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D3790_04290 e84fd127406eeb50e073aaa1223eda22 557 Pfam PF17392 Urocanase C-terminal domain 351 545 5.4E-93 T 01-11-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D3790_04290 e84fd127406eeb50e073aaa1223eda22 557 SUPERFAMILY SSF111326 6 555 1.15E-263 T 01-11-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D3790_04290 e84fd127406eeb50e073aaa1223eda22 557 Hamap MF_00577 Urocanate hydratase [hutU]. 3 555 50.769 T 01-11-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D3790_04290 e84fd127406eeb50e073aaa1223eda22 557 Gene3D G3DSA:3.40.50.10730 141 348 3.3E-262 T 01-11-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D3790_04290 e84fd127406eeb50e073aaa1223eda22 557 PIRSF PIRSF001423 1 557 3.6E-296 T 01-11-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D3790_14575 f6c20650495a7db8e12cc5edbfe1f5c7 248 SUPERFAMILY SSF52343 103 248 2.36E-36 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3790_14575 f6c20650495a7db8e12cc5edbfe1f5c7 248 Gene3D G3DSA:3.40.50.80 97 248 6.7E-40 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3790_14575 f6c20650495a7db8e12cc5edbfe1f5c7 248 Pfam PF00970 Oxidoreductase FAD-binding domain 18 88 5.2E-8 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 D3790_14575 f6c20650495a7db8e12cc5edbfe1f5c7 248 SUPERFAMILY SSF63380 3 99 1.04E-24 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel D3790_14575 f6c20650495a7db8e12cc5edbfe1f5c7 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 1.0E-16 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 D3790_14575 f6c20650495a7db8e12cc5edbfe1f5c7 248 Gene3D G3DSA:2.40.30.10 1 96 2.3E-31 T 01-11-2018 D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 Gene3D G3DSA:3.30.300.30 919 1026 1.0E-33 T 01-11-2018 D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 Gene3D G3DSA:3.30.559.30 1338 1592 3.6E-85 T 01-11-2018 D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 SUPERFAMILY SSF52777 232 497 8.89E-68 T 01-11-2018 D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 SUPERFAMILY SSF47336 2131 2204 3.01E-16 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 Pfam PF00668 Condensation domain 39 490 1.7E-108 T 01-11-2018 IPR001242 Condensation domain D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 Pfam PF00668 Condensation domain 1154 1594 3.3E-55 T 01-11-2018 IPR001242 Condensation domain D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 Gene3D G3DSA:3.40.50.1820 2130 2237 7.7E-22 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 SUPERFAMILY SSF52777 33 245 1.56E-47 T 01-11-2018 D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 Gene3D G3DSA:1.10.1200.10 1027 1111 5.9E-20 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 Gene3D G3DSA:3.30.300.30 2018 2129 6.7E-34 T 01-11-2018 D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 Gene3D G3DSA:3.30.559.10 40 419 8.9E-155 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 SUPERFAMILY SSF56801 469 1053 2.22E-165 T 01-11-2018 D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2163 2178 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 Gene3D G3DSA:3.30.559.30 229 475 8.9E-155 T 01-11-2018 D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 SUPERFAMILY SSF52777 1153 1352 2.33E-33 T 01-11-2018 D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 Pfam PF13193 AMP-binding enzyme C-terminal domain 2032 2112 7.8E-10 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 Pfam PF13193 AMP-binding enzyme C-terminal domain 933 1013 1.6E-9 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 SUPERFAMILY SSF47336 1033 1105 2.75E-15 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 Pfam PF00501 AMP-binding enzyme 1617 2024 9.0E-99 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 Pfam PF00501 AMP-binding enzyme 510 925 2.0E-105 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 Gene3D G3DSA:3.40.50.12780 500 917 4.3E-144 T 01-11-2018 D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 Gene3D G3DSA:3.40.50.12780 1606 2016 6.1E-139 T 01-11-2018 D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 SUPERFAMILY SSF56801 1574 2152 1.14E-155 T 01-11-2018 D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 ProSitePatterns PS00455 Putative AMP-binding domain signature. 663 674 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1766 1777 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 Pfam PF00550 Phosphopantetheine attachment site 2142 2202 7.8E-12 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 Pfam PF00550 Phosphopantetheine attachment site 1043 1103 3.6E-8 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 Gene3D G3DSA:3.30.559.10 1160 1526 3.6E-85 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 SUPERFAMILY SSF52777 1339 1579 3.11E-43 T 01-11-2018 D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1637 2048 8.6E-132 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_07880 efa927de8970b19232ae0c00718f42a8 2242 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 531 949 7.6E-136 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_06240 37e52c9792c27d8ede1fdd7862c0c7e9 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 306 5.3E-21 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 D3790_06240 37e52c9792c27d8ede1fdd7862c0c7e9 332 Gene3D G3DSA:3.40.50.300 11 331 1.1E-99 T 01-11-2018 D3790_06240 37e52c9792c27d8ede1fdd7862c0c7e9 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 325 6.0E-26 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 D3790_06240 37e52c9792c27d8ede1fdd7862c0c7e9 332 SMART SM00382 42 248 4.3E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_06240 37e52c9792c27d8ede1fdd7862c0c7e9 332 SUPERFAMILY SSF52540 43 313 3.8E-69 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_06240 37e52c9792c27d8ede1fdd7862c0c7e9 332 Pfam PF00005 ABC transporter 34 190 4.0E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_06240 37e52c9792c27d8ede1fdd7862c0c7e9 332 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_10635 1329efa244b119a3eff3078c2a1c20f0 88 SUPERFAMILY SSF109910 2 78 9.29E-27 T 01-11-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily D3790_10635 1329efa244b119a3eff3078c2a1c20f0 88 Gene3D G3DSA:1.10.150.250 1 88 4.0E-37 T 01-11-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily D3790_10635 1329efa244b119a3eff3078c2a1c20f0 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 76 1.4E-24 T 01-11-2018 IPR005631 Flavinator of succinate dehydrogenase D3790_03600 add3e22e75e1114c06784f6e9a685387 904 Gene3D G3DSA:1.20.120.620 401 507 6.6E-35 T 01-11-2018 IPR038318 KdpD, transmembrane domain superfamily D3790_03600 add3e22e75e1114c06784f6e9a685387 904 SUPERFAMILY SSF52402 252 348 9.21E-6 T 01-11-2018 D3790_03600 add3e22e75e1114c06784f6e9a685387 904 SMART SM00387 779 893 7.7E-31 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_03600 add3e22e75e1114c06784f6e9a685387 904 Pfam PF13492 GAF domain 576 650 2.4E-10 T 01-11-2018 IPR003018 GAF domain GO:0005515 D3790_03600 add3e22e75e1114c06784f6e9a685387 904 SUPERFAMILY SSF47384 664 737 7.46E-15 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D3790_03600 add3e22e75e1114c06784f6e9a685387 904 Gene3D G3DSA:3.30.565.10 737 894 2.3E-34 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_03600 add3e22e75e1114c06784f6e9a685387 904 Pfam PF00512 His Kinase A (phospho-acceptor) domain 670 736 1.9E-11 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_03600 add3e22e75e1114c06784f6e9a685387 904 Gene3D G3DSA:3.30.450.40 517 659 5.6E-33 T 01-11-2018 IPR029016 GAF-like domain superfamily D3790_03600 add3e22e75e1114c06784f6e9a685387 904 SMART SM00388 669 736 2.8E-15 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_03600 add3e22e75e1114c06784f6e9a685387 904 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 23 231 2.6E-93 T 01-11-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 D3790_03600 add3e22e75e1114c06784f6e9a685387 904 SUPERFAMILY SSF55874 725 893 6.42E-39 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_03600 add3e22e75e1114c06784f6e9a685387 904 Gene3D G3DSA:3.40.50.300 20 230 3.2E-95 T 01-11-2018 D3790_03600 add3e22e75e1114c06784f6e9a685387 904 Pfam PF13493 Domain of unknown function (DUF4118) 408 513 2.2E-26 T 01-11-2018 IPR025201 Sensor protein KdpD, transmembrane domain D3790_03600 add3e22e75e1114c06784f6e9a685387 904 Gene3D G3DSA:1.10.287.130 660 736 5.3E-14 T 01-11-2018 D3790_03600 add3e22e75e1114c06784f6e9a685387 904 SUPERFAMILY SSF55781 514 665 3.92E-10 T 01-11-2018 D3790_03600 add3e22e75e1114c06784f6e9a685387 904 PRINTS PR00344 Bacterial sensor protein C-terminal signature 838 848 1.5E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_03600 add3e22e75e1114c06784f6e9a685387 904 PRINTS PR00344 Bacterial sensor protein C-terminal signature 853 871 1.5E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_03600 add3e22e75e1114c06784f6e9a685387 904 PRINTS PR00344 Bacterial sensor protein C-terminal signature 820 834 1.5E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_03600 add3e22e75e1114c06784f6e9a685387 904 PRINTS PR00344 Bacterial sensor protein C-terminal signature 877 890 1.5E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_03600 add3e22e75e1114c06784f6e9a685387 904 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 781 892 5.6E-22 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_19415 88c4d608b840e1f60475ecdc849732c2 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 6.6E-32 T 01-11-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_19415 88c4d608b840e1f60475ecdc849732c2 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.581 T 01-11-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_19415 88c4d608b840e1f60475ecdc849732c2 86 SUPERFAMILY SSF46992 3 86 3.4E-32 T 01-11-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_19415 88c4d608b840e1f60475ecdc849732c2 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 3.0E-32 T 01-11-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_19415 88c4d608b840e1f60475ecdc849732c2 86 Gene3D G3DSA:1.20.58.110 1 86 3.3E-31 T 01-11-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_19415 88c4d608b840e1f60475ecdc849732c2 86 Pfam PF01649 Ribosomal protein S20 2 84 3.7E-28 T 01-11-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_11500 ca2e2287f1e41f2448b37a2c747dd128 572 Gene3D G3DSA:3.40.50.720 417 554 4.3E-25 T 01-11-2018 D3790_11500 ca2e2287f1e41f2448b37a2c747dd128 572 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 294 2.2E-74 T 01-11-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 D3790_11500 ca2e2287f1e41f2448b37a2c747dd128 572 Gene3D G3DSA:1.20.1530.20 7 398 6.1E-80 T 01-11-2018 IPR038770 Sodium/solute symporter superfamily D3790_11500 ca2e2287f1e41f2448b37a2c747dd128 572 Pfam PF00999 Sodium/hydrogen exchanger family 14 384 3.4E-79 T 01-11-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 D3790_11500 ca2e2287f1e41f2448b37a2c747dd128 572 Pfam PF02254 TrkA-N domain 421 533 1.0E-21 T 01-11-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 D3790_11500 ca2e2287f1e41f2448b37a2c747dd128 572 SUPERFAMILY SSF51735 418 547 1.95E-25 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_10995 43afff71b540931d418d7d6d291f38e4 314 Pfam PF01795 MraW methylase family 6 311 2.6E-116 T 01-11-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 D3790_10995 43afff71b540931d418d7d6d291f38e4 314 Gene3D G3DSA:3.40.50.150 11 311 1.5E-106 T 01-11-2018 D3790_10995 43afff71b540931d418d7d6d291f38e4 314 PIRSF PIRSF004486 2 313 2.5E-100 T 01-11-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 D3790_10995 43afff71b540931d418d7d6d291f38e4 314 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 8 312 37.775 T 01-11-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 D3790_10995 43afff71b540931d418d7d6d291f38e4 314 SUPERFAMILY SSF53335 8 311 7.3E-43 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_10995 43afff71b540931d418d7d6d291f38e4 314 SUPERFAMILY SSF81799 115 214 2.22E-34 T 01-11-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 D3790_10995 43afff71b540931d418d7d6d291f38e4 314 Gene3D G3DSA:1.10.150.170 113 215 1.5E-106 T 01-11-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 D3790_10995 43afff71b540931d418d7d6d291f38e4 314 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 5 311 4.9E-124 T 01-11-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 D3790_16235 a3787ca1a11cbb8a0e38f59d05c18e71 282 Gene3D G3DSA:3.40.190.10 126 219 3.0E-63 T 01-11-2018 D3790_16235 a3787ca1a11cbb8a0e38f59d05c18e71 282 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 62 75 - T 01-11-2018 IPR018313 Solute-binding protein family 3, conserved site D3790_16235 a3787ca1a11cbb8a0e38f59d05c18e71 282 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 259 1.2E-58 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3790_16235 a3787ca1a11cbb8a0e38f59d05c18e71 282 SMART SM00062 38 261 1.1E-66 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3790_16235 a3787ca1a11cbb8a0e38f59d05c18e71 282 Gene3D G3DSA:3.40.190.10 30 254 3.0E-63 T 01-11-2018 D3790_16235 a3787ca1a11cbb8a0e38f59d05c18e71 282 SUPERFAMILY SSF53850 10 260 2.34E-66 T 01-11-2018 D3790_16235 a3787ca1a11cbb8a0e38f59d05c18e71 282 SMART SM00079 40 260 0.0039 T 01-11-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 D3790_18085 86a8ec2d6cdb14aaad49726bf73872bc 275 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 51.218 T 01-11-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 D3790_18085 86a8ec2d6cdb14aaad49726bf73872bc 275 Pfam PF00149 Calcineurin-like phosphoesterase 4 126 3.1E-14 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 D3790_18085 86a8ec2d6cdb14aaad49726bf73872bc 275 SUPERFAMILY SSF56300 1 259 1.69E-58 T 01-11-2018 D3790_18085 86a8ec2d6cdb14aaad49726bf73872bc 275 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 270 1.1E-144 T 01-11-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 D3790_18085 86a8ec2d6cdb14aaad49726bf73872bc 275 PIRSF PIRSF000903 1 274 2.8E-123 T 01-11-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 D3790_18085 86a8ec2d6cdb14aaad49726bf73872bc 275 Gene3D G3DSA:3.60.21.10 1 274 1.2E-80 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like D3790_13435 526412f59c0e9e8f07043e9ddf1607c2 133 Pfam PF02316 Mu DNA-binding domain 9 61 7.2E-13 T 01-11-2018 IPR003314 Mu-type HTH domain GO:0003677 D3790_13435 526412f59c0e9e8f07043e9ddf1607c2 133 Gene3D G3DSA:1.10.10.10 2 74 5.6E-25 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_13435 526412f59c0e9e8f07043e9ddf1607c2 133 SUPERFAMILY SSF46955 3 68 3.94E-21 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily D3790_13435 526412f59c0e9e8f07043e9ddf1607c2 133 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 9 118 3.0E-5 T 01-11-2018 IPR010749 Protein of unknown function DUF1323 D3790_05080 744d9bb0652bfe49732ff364a6bd6888 283 Gene3D G3DSA:3.20.20.70 1 250 1.3E-113 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_05080 744d9bb0652bfe49732ff364a6bd6888 283 SUPERFAMILY SSF51621 5 192 1.38E-81 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D3790_05080 744d9bb0652bfe49732ff364a6bd6888 283 SUPERFAMILY SSF51395 160 255 9.89E-5 T 01-11-2018 D3790_05080 744d9bb0652bfe49732ff364a6bd6888 283 PIRSF PIRSF034452 2 275 9.2E-142 T 01-11-2018 IPR009215 TIM-barrel domain, IGPS-like D3790_05080 744d9bb0652bfe49732ff364a6bd6888 283 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 6 271 1.1E-128 T 01-11-2018 IPR009215 TIM-barrel domain, IGPS-like D3790_02855 41c7f682f737c729daa5ea7a68a3d4e1 198 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 1.0E-76 T 01-11-2018 IPR017757 Transcriptional repressor BetI D3790_02855 41c7f682f737c729daa5ea7a68a3d4e1 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 4.6E-6 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D3790_02855 41c7f682f737c729daa5ea7a68a3d4e1 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 4.6E-6 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D3790_02855 41c7f682f737c729daa5ea7a68a3d4e1 198 SUPERFAMILY SSF46689 5 77 1.49E-15 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_02855 41c7f682f737c729daa5ea7a68a3d4e1 198 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 101.317 T 01-11-2018 IPR017757 Transcriptional repressor BetI D3790_02855 41c7f682f737c729daa5ea7a68a3d4e1 198 SUPERFAMILY SSF48498 82 193 7.63E-20 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D3790_02855 41c7f682f737c729daa5ea7a68a3d4e1 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 9.0E-12 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D3790_02855 41c7f682f737c729daa5ea7a68a3d4e1 198 Gene3D G3DSA:1.10.357.10 7 194 1.9E-42 T 01-11-2018 D3790_02855 41c7f682f737c729daa5ea7a68a3d4e1 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 01-11-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site D3790_02855 41c7f682f737c729daa5ea7a68a3d4e1 198 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 84 191 2.5E-31 T 01-11-2018 IPR039538 BetI-type transcriptional repressor, C-terminal D3790_15695 2e4d4ca9f5f050d195d8dff38f339bdb 265 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 7 265 4.2E-119 T 01-11-2018 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18 D3790_15695 2e4d4ca9f5f050d195d8dff38f339bdb 265 Gene3D G3DSA:3.90.226.10 1 207 7.0E-73 T 01-11-2018 D3790_15695 2e4d4ca9f5f050d195d8dff38f339bdb 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 264 8.3E-68 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 D3790_15695 2e4d4ca9f5f050d195d8dff38f339bdb 265 SUPERFAMILY SSF52096 2 264 1.27E-85 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily D3790_15695 2e4d4ca9f5f050d195d8dff38f339bdb 265 Gene3D G3DSA:1.10.12.10 208 265 5.7E-25 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal D3790_13635 111d8281b64e5e5a1681a840f1032acc 477 SUPERFAMILY SSF47203 260 474 2.3E-50 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 D3790_13635 111d8281b64e5e5a1681a840f1032acc 477 Gene3D G3DSA:1.10.3140.10 2 140 1.7E-39 T 01-11-2018 D3790_13635 111d8281b64e5e5a1681a840f1032acc 477 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 4 269 3.9E-88 T 01-11-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal D3790_13635 111d8281b64e5e5a1681a840f1032acc 477 Gene3D G3DSA:1.20.140.10 272 476 5.3E-64 T 01-11-2018 D3790_13635 111d8281b64e5e5a1681a840f1032acc 477 PIRSF PIRSF000331 1 477 1.5E-132 T 01-11-2018 IPR004925 HpaB/PvcC/4-BUDH D3790_13635 111d8281b64e5e5a1681a840f1032acc 477 SUPERFAMILY SSF56645 1 269 1.13E-67 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 D3790_13635 111d8281b64e5e5a1681a840f1032acc 477 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 276 474 5.4E-60 T 01-11-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal D3790_13635 111d8281b64e5e5a1681a840f1032acc 477 Gene3D G3DSA:2.40.110.10 141 270 1.6E-42 T 01-11-2018 D3790_18470 d76e640751338b2d3394bbdd9fbf5a5b 197 SUPERFAMILY SSF53098 5 195 1.82E-68 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_18470 d76e640751338b2d3394bbdd9fbf5a5b 197 Pfam PF01351 Ribonuclease HII 13 189 2.3E-39 T 01-11-2018 IPR024567 Ribonuclease HII/HIII domain D3790_18470 d76e640751338b2d3394bbdd9fbf5a5b 197 Hamap MF_00052_B Ribonuclease HII [rnhB]. 11 190 39.062 T 01-11-2018 IPR022898 Ribonuclease HII GO:0004523 D3790_18470 d76e640751338b2d3394bbdd9fbf5a5b 197 Gene3D G3DSA:3.30.420.10 1 196 9.8E-76 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_08260 6853642e3f990768953336144c996c13 333 Pfam PF01032 FecCD transport family 17 327 1.8E-99 T 01-11-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 D3790_08260 6853642e3f990768953336144c996c13 333 Gene3D G3DSA:1.10.3470.10 6 330 6.1E-123 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_08260 6853642e3f990768953336144c996c13 333 SUPERFAMILY SSF81345 8 327 3.14E-90 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_11505 8bdab090701b2bbb12b227d8f2a340e2 405 SUPERFAMILY SSF103473 14 402 1.19E-57 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_11505 8bdab090701b2bbb12b227d8f2a340e2 405 Pfam PF07690 Major Facilitator Superfamily 29 354 1.2E-36 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_11505 8bdab090701b2bbb12b227d8f2a340e2 405 Gene3D G3DSA:1.20.1250.20 6 399 3.0E-43 T 01-11-2018 D3790_11505 8bdab090701b2bbb12b227d8f2a340e2 405 PRINTS PR01988 Putative bacilysin exporter bacE signature 269 286 6.1E-5 T 01-11-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 D3790_11505 8bdab090701b2bbb12b227d8f2a340e2 405 PRINTS PR01988 Putative bacilysin exporter bacE signature 64 82 6.1E-5 T 01-11-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 D3790_11505 8bdab090701b2bbb12b227d8f2a340e2 405 PRINTS PR01988 Putative bacilysin exporter bacE signature 111 129 6.1E-5 T 01-11-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 D3790_11505 8bdab090701b2bbb12b227d8f2a340e2 405 PRINTS PR01988 Putative bacilysin exporter bacE signature 150 171 6.1E-5 T 01-11-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 D3790_19015 9ceff831a820db6331dba9eafbc69fe5 444 Gene3D G3DSA:3.90.230.10 162 444 2.1E-79 T 01-11-2018 D3790_19015 9ceff831a820db6331dba9eafbc69fe5 444 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 336 348 - T 01-11-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site D3790_19015 9ceff831a820db6331dba9eafbc69fe5 444 Pfam PF00557 Metallopeptidase family M24 169 431 3.6E-45 T 01-11-2018 IPR000994 Peptidase M24 D3790_19015 9ceff831a820db6331dba9eafbc69fe5 444 Gene3D G3DSA:3.40.350.10 1 160 7.2E-58 T 01-11-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal D3790_19015 9ceff831a820db6331dba9eafbc69fe5 444 SUPERFAMILY SSF55920 164 439 1.03E-55 T 01-11-2018 IPR036005 Creatinase/aminopeptidase-like D3790_19015 9ceff831a820db6331dba9eafbc69fe5 444 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 444 56.0 T 01-11-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 8.1E-23 T 01-11-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 Gene3D G3DSA:3.30.930.10 485 693 2.7E-63 T 01-11-2018 D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 SUPERFAMILY SSF56037 195 394 8.89E-77 T 01-11-2018 D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.1E-27 T 01-11-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 SUPERFAMILY SSF46955 403 475 4.94E-23 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 SUPERFAMILY SSF54991 696 794 4.97E-31 T 01-11-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 Gene3D G3DSA:3.30.70.380 702 795 2.6E-30 T 01-11-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 Pfam PF03483 B3/4 domain 212 385 1.1E-70 T 01-11-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 Pfam PF01588 Putative tRNA binding domain 46 145 4.3E-27 T 01-11-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 47.758 T 01-11-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 Gene3D G3DSA:3.50.40.10 197 395 5.3E-81 T 01-11-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 1.1E-289 T 01-11-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 SMART SM00873 212 385 4.9E-96 T 01-11-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 SUPERFAMILY SSF50249 36 194 9.79E-49 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 Gene3D G3DSA:3.30.56.10 401 475 1.0E-29 T 01-11-2018 D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 Gene3D G3DSA:2.40.50.140 39 154 3.4E-72 T 01-11-2018 D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 SMART SM00896 701 794 7.0E-45 T 01-11-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 SUPERFAMILY SSF55681 467 689 5.96E-55 T 01-11-2018 D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 Gene3D G3DSA:3.30.56.10 7 180 3.4E-72 T 01-11-2018 D3790_08355 364b45dcd24ecdce0998f73c8cd46f91 795 SMART SM00874 403 471 1.4E-32 T 01-11-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 D3790_11375 e3a038d90eb4d0d8e2cb64e05954cf0d 589 Gene3D G3DSA:1.20.1560.10 1 331 1.7E-73 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_11375 e3a038d90eb4d0d8e2cb64e05954cf0d 589 SUPERFAMILY SSF90123 11 327 2.35E-68 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_11375 e3a038d90eb4d0d8e2cb64e05954cf0d 589 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_11375 e3a038d90eb4d0d8e2cb64e05954cf0d 589 SMART SM00382 368 553 3.6E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_11375 e3a038d90eb4d0d8e2cb64e05954cf0d 589 Pfam PF00664 ABC transporter transmembrane region 27 296 1.4E-38 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D3790_11375 e3a038d90eb4d0d8e2cb64e05954cf0d 589 Pfam PF00005 ABC transporter 359 507 8.9E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_11375 e3a038d90eb4d0d8e2cb64e05954cf0d 589 Gene3D G3DSA:3.40.50.300 334 585 6.0E-83 T 01-11-2018 D3790_11375 e3a038d90eb4d0d8e2cb64e05954cf0d 589 SUPERFAMILY SSF52540 338 578 8.2E-80 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_01890 84decd632ed4448ab55f8d96b503270b 276 Gene3D G3DSA:2.60.120.10 16 123 9.3E-35 T 01-11-2018 IPR014710 RmlC-like jelly roll fold D3790_01890 84decd632ed4448ab55f8d96b503270b 276 PIRSF PIRSF036628 1 270 3.7E-107 T 01-11-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 D3790_01890 84decd632ed4448ab55f8d96b503270b 276 Pfam PF04962 KduI/IolB family 6 264 1.4E-109 T 01-11-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 D3790_01890 84decd632ed4448ab55f8d96b503270b 276 SUPERFAMILY SSF51182 5 253 2.36E-68 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily D3790_01890 84decd632ed4448ab55f8d96b503270b 276 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 19 264 1.3E-98 T 01-11-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 D3790_01890 84decd632ed4448ab55f8d96b503270b 276 Gene3D G3DSA:2.60.120.10 124 271 4.3E-61 T 01-11-2018 IPR014710 RmlC-like jelly roll fold D3790_05485 19c14ed90199fd2995d466a313b465bc 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 01-11-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D3790_05485 19c14ed90199fd2995d466a313b465bc 237 SUPERFAMILY SSF56104 4 232 9.81E-75 T 01-11-2018 D3790_05485 19c14ed90199fd2995d466a313b465bc 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 7.4E-80 T 01-11-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 D3790_05485 19c14ed90199fd2995d466a313b465bc 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.459 T 01-11-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D3790_05485 19c14ed90199fd2995d466a313b465bc 237 Gene3D G3DSA:3.30.470.20 85 220 6.0E-91 T 01-11-2018 D3790_05485 19c14ed90199fd2995d466a313b465bc 237 Gene3D G3DSA:3.30.200.20 7 231 6.0E-91 T 01-11-2018 D3790_05485 19c14ed90199fd2995d466a313b465bc 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 01-11-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D3790_05485 19c14ed90199fd2995d466a313b465bc 237 Pfam PF01259 SAICAR synthetase 7 231 2.3E-58 T 01-11-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D3790_03550 68430557a26dd00c4694fa94bd14d640 382 Pfam PF00550 Phosphopantetheine attachment site 16 79 6.3E-10 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_03550 68430557a26dd00c4694fa94bd14d640 382 Gene3D G3DSA:1.10.1200.10 5 84 2.7E-13 T 01-11-2018 IPR036736 ACP-like superfamily D3790_03550 68430557a26dd00c4694fa94bd14d640 382 Pfam PF00561 alpha/beta hydrolase fold 118 218 1.5E-13 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_03550 68430557a26dd00c4694fa94bd14d640 382 Gene3D G3DSA:3.40.50.1820 88 361 1.4E-36 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_03550 68430557a26dd00c4694fa94bd14d640 382 SUPERFAMILY SSF53474 87 358 4.3E-38 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_03550 68430557a26dd00c4694fa94bd14d640 382 PRINTS PR00111 Alpha/beta hydrolase fold signature 182 195 1.1E-10 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_03550 68430557a26dd00c4694fa94bd14d640 382 PRINTS PR00111 Alpha/beta hydrolase fold signature 138 153 1.1E-10 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_03550 68430557a26dd00c4694fa94bd14d640 382 PRINTS PR00111 Alpha/beta hydrolase fold signature 196 209 1.1E-10 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_03550 68430557a26dd00c4694fa94bd14d640 382 PRINTS PR00111 Alpha/beta hydrolase fold signature 303 317 1.1E-10 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_03550 68430557a26dd00c4694fa94bd14d640 382 SUPERFAMILY SSF47336 9 82 6.02E-14 T 01-11-2018 IPR036736 ACP-like superfamily D3790_01725 d3b1ebb5355e75a9468cb090a4109d49 452 SUPERFAMILY SSF53955 171 335 3.94E-30 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily D3790_01725 d3b1ebb5355e75a9468cb090a4109d49 452 Gene3D G3DSA:1.10.530.70 174 333 8.9E-17 T 01-11-2018 D3790_01725 d3b1ebb5355e75a9468cb090a4109d49 452 Pfam PF00182 Chitinase class I 238 292 1.7E-4 T 01-11-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 D3790_05785 87cc98aa0adccc9f3ac5e3a522003132 808 SMART SM00778 46 85 2.3E-9 T 01-11-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 D3790_05785 87cc98aa0adccc9f3ac5e3a522003132 808 SMART SM00885 365 491 1.1E-6 T 01-11-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal D3790_05785 87cc98aa0adccc9f3ac5e3a522003132 808 Pfam PF03288 Poxvirus D5 protein-like 699 794 2.0E-18 T 01-11-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal D3790_05785 87cc98aa0adccc9f3ac5e3a522003132 808 Gene3D G3DSA:1.10.10.10 699 797 2.1E-38 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_05785 87cc98aa0adccc9f3ac5e3a522003132 808 SUPERFAMILY SSF57783 43 115 7.48E-10 T 01-11-2018 D3790_05785 87cc98aa0adccc9f3ac5e3a522003132 808 Gene3D G3DSA:3.40.50.300 490 662 2.1E-7 T 01-11-2018 D3790_05785 87cc98aa0adccc9f3ac5e3a522003132 808 SUPERFAMILY SSF52540 507 666 5.04E-9 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05785 87cc98aa0adccc9f3ac5e3a522003132 808 Gene3D G3DSA:3.40.1360.10 198 327 2.3E-6 T 01-11-2018 D3790_05785 87cc98aa0adccc9f3ac5e3a522003132 808 Pfam PF08273 Zinc-binding domain of primase-helicase 46 85 6.0E-10 T 01-11-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 D3790_05785 87cc98aa0adccc9f3ac5e3a522003132 808 Pfam PF08706 D5 N terminal like 330 473 1.1E-4 T 01-11-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal D3790_05785 87cc98aa0adccc9f3ac5e3a522003132 808 Pfam PF13362 Toprim domain 210 317 3.5E-12 T 01-11-2018 IPR006171 TOPRIM domain D3790_05785 87cc98aa0adccc9f3ac5e3a522003132 808 SUPERFAMILY SSF46785 700 797 5.17E-38 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_14200 95d438bcd4d630c0b50b5c9bb1e27933 104 Gene3D G3DSA:2.30.30.30 2 104 1.1E-39 T 01-11-2018 IPR014722 Ribosomal protein L2, domain 2 D3790_14200 95d438bcd4d630c0b50b5c9bb1e27933 104 SUPERFAMILY SSF50104 4 101 4.57E-33 T 01-11-2018 IPR008991 Translation protein SH3-like domain superfamily D3790_14200 95d438bcd4d630c0b50b5c9bb1e27933 104 SMART SM00739 4 31 0.0044 T 01-11-2018 IPR005824 KOW D3790_14200 95d438bcd4d630c0b50b5c9bb1e27933 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 3.6E-39 T 01-11-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14200 95d438bcd4d630c0b50b5c9bb1e27933 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 1.9E-23 T 01-11-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14200 95d438bcd4d630c0b50b5c9bb1e27933 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 01-11-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14200 95d438bcd4d630c0b50b5c9bb1e27933 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.959 T 01-11-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_07585 6f9a8df3f9ce2f0cb1730f15c0390b67 187 TIGRFAM TIGR04045 MSMEG_0567_GNAT: putative N-acetyltransferase, MSMEG_0567 N-terminal domain family 24 173 5.2E-63 T 01-11-2018 IPR024035 GNAT N-acetyltransferase, putative D3790_07585 6f9a8df3f9ce2f0cb1730f15c0390b67 187 Pfam PF00583 Acetyltransferase (GNAT) family 37 145 9.2E-10 T 01-11-2018 IPR000182 GNAT domain D3790_07585 6f9a8df3f9ce2f0cb1730f15c0390b67 187 SUPERFAMILY SSF55729 27 171 1.16E-24 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_07585 6f9a8df3f9ce2f0cb1730f15c0390b67 187 Gene3D G3DSA:3.40.630.30 23 170 7.4E-20 T 01-11-2018 D3790_02245 7c71df55c5a47f3913cf9f3401abd5e5 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 79 97 8.1E-6 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_02245 7c71df55c5a47f3913cf9f3401abd5e5 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 8.1E-6 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_02245 7c71df55c5a47f3913cf9f3401abd5e5 301 Hamap MF_00367 GTPase Era [era]. 6 297 35.85 T 01-11-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_02245 7c71df55c5a47f3913cf9f3401abd5e5 301 Gene3D G3DSA:3.30.300.20 186 301 1.1E-43 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta D3790_02245 7c71df55c5a47f3913cf9f3401abd5e5 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 170 6.6E-39 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D3790_02245 7c71df55c5a47f3913cf9f3401abd5e5 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 280 2.6E-116 T 01-11-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_02245 7c71df55c5a47f3913cf9f3401abd5e5 301 Pfam PF01926 50S ribosome-binding GTPase 11 125 3.8E-23 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_02245 7c71df55c5a47f3913cf9f3401abd5e5 301 SUPERFAMILY SSF54814 182 297 1.14E-42 T 01-11-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 D3790_02245 7c71df55c5a47f3913cf9f3401abd5e5 301 SUPERFAMILY SSF52540 11 205 3.38E-44 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_02245 7c71df55c5a47f3913cf9f3401abd5e5 301 Pfam PF07650 KH domain 209 285 4.4E-20 T 01-11-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_02245 7c71df55c5a47f3913cf9f3401abd5e5 301 Gene3D G3DSA:3.40.50.300 3 184 1.6E-50 T 01-11-2018 D3790_05330 deaeca279d26a083df13529d7544dcdc 482 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 442 7.5E-163 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D3790_05330 deaeca279d26a083df13529d7544dcdc 482 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D3790_05330 deaeca279d26a083df13529d7544dcdc 482 PRINTS PR00175 Sodium/alanine symporter signature 87 109 1.9E-56 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D3790_05330 deaeca279d26a083df13529d7544dcdc 482 PRINTS PR00175 Sodium/alanine symporter signature 178 196 1.9E-56 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D3790_05330 deaeca279d26a083df13529d7544dcdc 482 PRINTS PR00175 Sodium/alanine symporter signature 303 321 1.9E-56 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D3790_05330 deaeca279d26a083df13529d7544dcdc 482 PRINTS PR00175 Sodium/alanine symporter signature 350 372 1.9E-56 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D3790_05330 deaeca279d26a083df13529d7544dcdc 482 PRINTS PR00175 Sodium/alanine symporter signature 206 225 1.9E-56 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D3790_05330 deaeca279d26a083df13529d7544dcdc 482 PRINTS PR00175 Sodium/alanine symporter signature 411 431 1.9E-56 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D3790_05330 deaeca279d26a083df13529d7544dcdc 482 Pfam PF01235 Sodium:alanine symporter family 48 453 3.7E-162 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D3790_03160 17e89ec983d4590a7c3226f87ede8c70 395 Gene3D G3DSA:2.40.50.100 65 115 4.3E-6 T 01-11-2018 D3790_03160 17e89ec983d4590a7c3226f87ede8c70 395 SUPERFAMILY SSF111369 57 113 4.18E-7 T 01-11-2018 D3790_03160 17e89ec983d4590a7c3226f87ede8c70 395 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 215 294 6.5E-12 T 01-11-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D3790_03160 17e89ec983d4590a7c3226f87ede8c70 395 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 22 347 7.8E-131 T 01-11-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 D3790_03160 17e89ec983d4590a7c3226f87ede8c70 395 SUPERFAMILY SSF111369 196 270 8.24E-7 T 01-11-2018 D3790_03160 17e89ec983d4590a7c3226f87ede8c70 395 Pfam PF13533 Biotin-lipoyl like 63 111 1.3E-10 T 01-11-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain D3790_03160 17e89ec983d4590a7c3226f87ede8c70 395 Pfam PF00529 HlyD membrane-fusion protein of T1SS 117 349 6.4E-17 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D3790_03160 17e89ec983d4590a7c3226f87ede8c70 395 Gene3D G3DSA:2.40.30.170 236 355 1.5E-36 T 01-11-2018 D3790_03160 17e89ec983d4590a7c3226f87ede8c70 395 Gene3D G3DSA:1.10.287.470 116 219 2.0E-6 T 01-11-2018 D3790_07110 d3a47bab24a7158d9c7382c5a9da8c50 510 SUPERFAMILY SSF52283 1 168 8.5E-55 T 01-11-2018 D3790_07110 d3a47bab24a7158d9c7382c5a9da8c50 510 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 8.8E-76 T 01-11-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain D3790_07110 d3a47bab24a7158d9c7382c5a9da8c50 510 Gene3D G3DSA:3.40.50.720 3 365 1.2E-161 T 01-11-2018 D3790_07110 d3a47bab24a7158d9c7382c5a9da8c50 510 SUPERFAMILY SSF51735 137 317 2.07E-37 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_07110 d3a47bab24a7158d9c7382c5a9da8c50 510 Gene3D G3DSA:3.40.50.720 137 318 1.2E-161 T 01-11-2018 D3790_07110 d3a47bab24a7158d9c7382c5a9da8c50 510 PIRSF PIRSF000203 1 509 7.3E-275 T 01-11-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 D3790_07110 d3a47bab24a7158d9c7382c5a9da8c50 510 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 510 1.7E-286 T 01-11-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 D3790_07110 d3a47bab24a7158d9c7382c5a9da8c50 510 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 01-11-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 D3790_07110 d3a47bab24a7158d9c7382c5a9da8c50 510 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 01-11-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 D3790_07110 d3a47bab24a7158d9c7382c5a9da8c50 510 SMART SM01002 146 311 8.8E-84 T 01-11-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain D3790_07110 d3a47bab24a7158d9c7382c5a9da8c50 510 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 427 509 4.7E-35 T 01-11-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 D3790_07110 d3a47bab24a7158d9c7382c5a9da8c50 510 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.3E-50 T 01-11-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal D3790_07110 d3a47bab24a7158d9c7382c5a9da8c50 510 SMART SM01003 4 137 7.3E-72 T 01-11-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal D3790_06730 cd16a106ce9c4e3013d735c5c0154477 396 SUPERFAMILY SSF56266 27 389 4.71E-108 T 01-11-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 D3790_06730 cd16a106ce9c4e3013d735c5c0154477 396 Gene3D G3DSA:3.60.70.12 27 391 5.7E-143 T 01-11-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 D3790_06730 cd16a106ce9c4e3013d735c5c0154477 396 Pfam PF03576 Peptidase family S58 44 372 2.0E-108 T 01-11-2018 IPR005321 Peptidase S58, DmpA D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 SUPERFAMILY SSF52540 187 521 4.42E-71 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 231 333 1.2E-8 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 Gene3D G3DSA:3.40.50.300 372 558 2.5E-41 T 01-11-2018 D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 Gene3D G3DSA:3.40.50.300 564 781 4.1E-65 T 01-11-2018 D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 866 0.0 T 01-11-2018 IPR017729 Type VI secretion system, ATPase ClpV1 D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 SMART SM01086 783 875 9.4E-14 T 01-11-2018 IPR019489 Clp ATPase, C-terminal D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 322 334 - T 01-11-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 615 633 2.8E-33 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 722 736 2.8E-33 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 660 678 2.8E-33 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 689 707 2.8E-33 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 Pfam PF07724 AAA domain (Cdc48 subfamily) 610 776 1.8E-39 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 SUPERFAMILY SSF52540 560 865 3.81E-63 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 SMART SM00382 226 371 6.6E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 SMART SM00382 611 753 3.6E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 SUPERFAMILY SSF81923 12 139 2.16E-17 T 01-11-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 Gene3D G3DSA:3.40.50.300 176 370 3.2E-60 T 01-11-2018 D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 Gene3D G3DSA:1.10.8.60 783 878 2.3E-13 T 01-11-2018 D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 Gene3D G3DSA:1.10.1780.10 1 161 3.5E-42 T 01-11-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 D3790_05985 430c1ca2ad2c5d4c8d014c543ab61bf4 879 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 783 858 1.4E-14 T 01-11-2018 IPR019489 Clp ATPase, C-terminal D3790_09795 c185a84c6636a796a9b14a1ed5c0702a 182 SUPERFAMILY SSF55166 66 182 6.8E-32 T 01-11-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 D3790_09795 c185a84c6636a796a9b14a1ed5c0702a 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 9.7E-62 T 01-11-2018 IPR010275 Protein of unknown function DUF882 D3790_09795 c185a84c6636a796a9b14a1ed5c0702a 182 Gene3D G3DSA:3.30.1380.10 61 182 1.4E-10 T 01-11-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 D3790_19390 a742ef4ae8e804ebacee5fdeb4b9f024 317 Pfam PF02401 LytB protein 3 284 3.0E-92 T 01-11-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 D3790_19390 a742ef4ae8e804ebacee5fdeb4b9f024 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 37.163 T 01-11-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 D3790_19390 a742ef4ae8e804ebacee5fdeb4b9f024 317 Gene3D G3DSA:3.40.1010.20 6 283 5.2E-111 T 01-11-2018 D3790_19390 a742ef4ae8e804ebacee5fdeb4b9f024 317 Gene3D G3DSA:3.40.50.11270 12 97 5.2E-111 T 01-11-2018 D3790_19390 a742ef4ae8e804ebacee5fdeb4b9f024 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 2.0E-99 T 01-11-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 D3790_19390 a742ef4ae8e804ebacee5fdeb4b9f024 317 Gene3D G3DSA:3.40.1010.20 98 197 5.2E-111 T 01-11-2018 D3790_13960 69ff52fe135ad5845c95530d1630908d 371 PRINTS PR01270 Histone deacetylase superfamily signature 260 270 1.7E-15 T 01-11-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D3790_13960 69ff52fe135ad5845c95530d1630908d 371 PRINTS PR01270 Histone deacetylase superfamily signature 175 190 1.7E-15 T 01-11-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D3790_13960 69ff52fe135ad5845c95530d1630908d 371 PRINTS PR01270 Histone deacetylase superfamily signature 141 164 1.7E-15 T 01-11-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D3790_13960 69ff52fe135ad5845c95530d1630908d 371 Gene3D G3DSA:3.40.800.20 2 371 2.4E-138 T 01-11-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D3790_13960 69ff52fe135ad5845c95530d1630908d 371 SUPERFAMILY SSF52768 3 341 2.64E-100 T 01-11-2018 IPR023696 Ureohydrolase domain superfamily D3790_13960 69ff52fe135ad5845c95530d1630908d 371 Pfam PF00850 Histone deacetylase domain 43 328 3.2E-78 T 01-11-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D3790_02810 2b53468c2820123b1d8153f22087a731 817 Gene3D G3DSA:2.40.170.20 233 817 1.3E-88 T 01-11-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3790_02810 2b53468c2820123b1d8153f22087a731 817 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 118 817 1.3E-114 T 01-11-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 D3790_02810 2b53468c2820123b1d8153f22087a731 817 Gene3D G3DSA:2.170.130.10 117 232 3.0E-28 T 01-11-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D3790_02810 2b53468c2820123b1d8153f22087a731 817 Pfam PF00593 TonB dependent receptor 329 814 4.2E-41 T 01-11-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D3790_02810 2b53468c2820123b1d8153f22087a731 817 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 123 817 8.5E-144 T 01-11-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 D3790_02810 2b53468c2820123b1d8153f22087a731 817 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 800 817 - T 01-11-2018 IPR010917 TonB-dependent receptor, conserved site D3790_02810 2b53468c2820123b1d8153f22087a731 817 SUPERFAMILY SSF56935 124 817 6.96E-82 T 01-11-2018 D3790_02810 2b53468c2820123b1d8153f22087a731 817 Pfam PF07715 TonB-dependent Receptor Plug Domain 122 221 5.7E-15 T 01-11-2018 IPR012910 TonB-dependent receptor, plug domain D3790_07365 7c59a370c1d7aa2eebb02ea0988e8c5d 318 SUPERFAMILY SSF53807 33 317 2.6E-75 T 01-11-2018 D3790_07365 7c59a370c1d7aa2eebb02ea0988e8c5d 318 Pfam PF01297 Zinc-uptake complex component A periplasmic 34 314 2.6E-59 T 01-11-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 D3790_07365 7c59a370c1d7aa2eebb02ea0988e8c5d 318 Gene3D G3DSA:3.40.50.1980 207 318 1.2E-40 T 01-11-2018 D3790_07365 7c59a370c1d7aa2eebb02ea0988e8c5d 318 Gene3D G3DSA:3.40.50.1980 33 205 2.0E-55 T 01-11-2018 D3790_16840 c27c9fa9fd2b7889a7c383cd650c96a1 411 Gene3D G3DSA:3.90.1150.10 262 404 5.5E-10 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_16840 c27c9fa9fd2b7889a7c383cd650c96a1 411 Gene3D G3DSA:3.40.640.10 20 260 2.1E-59 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_16840 c27c9fa9fd2b7889a7c383cd650c96a1 411 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 43 382 2.5E-70 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase D3790_16840 c27c9fa9fd2b7889a7c383cd650c96a1 411 SUPERFAMILY SSF53383 41 386 1.18E-64 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_16840 c27c9fa9fd2b7889a7c383cd650c96a1 411 PIRSF PIRSF000390 14 400 4.4E-66 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase D3790_04785 39fff436b7506968ddd7265f6e7460c2 907 Pfam PF00384 Molybdopterin oxidoreductase 567 642 5.2E-6 T 01-11-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04785 39fff436b7506968ddd7265f6e7460c2 907 SUPERFAMILY SSF54862 81 213 1.26E-32 T 01-11-2018 D3790_04785 39fff436b7506968ddd7265f6e7460c2 907 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 01-11-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04785 39fff436b7506968ddd7265f6e7460c2 907 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 5.4E-9 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04785 39fff436b7506968ddd7265f6e7460c2 907 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 01-11-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04785 39fff436b7506968ddd7265f6e7460c2 907 SUPERFAMILY SSF53706 219 689 9.91E-79 T 01-11-2018 D3790_04785 39fff436b7506968ddd7265f6e7460c2 907 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 655 3.3E-197 T 01-11-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04785 39fff436b7506968ddd7265f6e7460c2 907 Gene3D G3DSA:2.40.40.20 812 905 2.0E-5 T 01-11-2018 D3790_04785 39fff436b7506968ddd7265f6e7460c2 907 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 77 6.6E-11 T 01-11-2018 D3790_04785 39fff436b7506968ddd7265f6e7460c2 907 SUPERFAMILY SSF50692 814 903 6.56E-10 T 01-11-2018 IPR009010 Aspartate decarboxylase-like domain superfamily D3790_04785 39fff436b7506968ddd7265f6e7460c2 907 SMART SM00926 221 275 3.7E-8 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04785 39fff436b7506968ddd7265f6e7460c2 907 Gene3D G3DSA:3.40.50.740 528 689 2.5E-11 T 01-11-2018 D3790_04785 39fff436b7506968ddd7265f6e7460c2 907 SUPERFAMILY SSF54292 1 77 5.37E-18 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D3790_04785 39fff436b7506968ddd7265f6e7460c2 907 SMART SM00929 88 128 2.4E-18 T 01-11-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04785 39fff436b7506968ddd7265f6e7460c2 907 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 01-11-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04785 39fff436b7506968ddd7265f6e7460c2 907 Gene3D G3DSA:2.20.25.90 221 275 7.0E-12 T 01-11-2018 D3790_04785 39fff436b7506968ddd7265f6e7460c2 907 Gene3D G3DSA:3.10.20.740 1 127 5.4E-28 T 01-11-2018 D3790_04785 39fff436b7506968ddd7265f6e7460c2 907 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 123 2.2E-14 T 01-11-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_05100 29e8a84b38fcb64f807f48edf7deb9dc 1052 SMART SM00316 37 119 2.4E-12 T 01-11-2018 IPR022967 RNA-binding domain, S1 D3790_05100 29e8a84b38fcb64f807f48edf7deb9dc 1052 Pfam PF00575 S1 RNA binding domain 36 118 9.4E-16 T 01-11-2018 IPR003029 S1 domain GO:0003676 D3790_05100 29e8a84b38fcb64f807f48edf7deb9dc 1052 Gene3D G3DSA:3.40.1260.20 401 510 2.1E-41 T 01-11-2018 D3790_05100 29e8a84b38fcb64f807f48edf7deb9dc 1052 Pfam PF10150 Ribonuclease E/G family 121 391 4.2E-91 T 01-11-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 D3790_05100 29e8a84b38fcb64f807f48edf7deb9dc 1052 SUPERFAMILY SSF50249 40 124 4.78E-21 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_05100 29e8a84b38fcb64f807f48edf7deb9dc 1052 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 1.1E-168 T 01-11-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 D3790_05100 29e8a84b38fcb64f807f48edf7deb9dc 1052 Gene3D G3DSA:2.40.50.140 32 125 1.0E-33 T 01-11-2018 D3790_05100 29e8a84b38fcb64f807f48edf7deb9dc 1052 Hamap MF_00970 Ribonuclease E [rne]. 1 1038 35.965 T 01-11-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 D3790_05100 29e8a84b38fcb64f807f48edf7deb9dc 1052 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1013 1049 2.7E-15 T 01-11-2018 IPR021968 Polyribonucleotide phosphorylase C-terminal D3790_17155 dfcd795ef46c7f4ea9e947578f647801 904 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_17155 dfcd795ef46c7f4ea9e947578f647801 904 Gene3D G3DSA:3.40.50.300 3 162 6.5E-7 T 01-11-2018 D3790_17155 dfcd795ef46c7f4ea9e947578f647801 904 SMART SM00421 836 893 3.7E-19 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_17155 dfcd795ef46c7f4ea9e947578f647801 904 Pfam PF13181 Tetratricopeptide repeat 740 762 0.049 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D3790_17155 dfcd795ef46c7f4ea9e947578f647801 904 Gene3D G3DSA:1.10.10.10 808 899 4.5E-18 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_17155 dfcd795ef46c7f4ea9e947578f647801 904 SUPERFAMILY SSF46894 831 894 1.43E-16 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D3790_17155 dfcd795ef46c7f4ea9e947578f647801 904 SUPERFAMILY SSF52540 8 245 1.27E-10 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_17155 dfcd795ef46c7f4ea9e947578f647801 904 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 891 3.6E-18 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_17155 dfcd795ef46c7f4ea9e947578f647801 904 Pfam PF07721 Tetratricopeptide repeat 455 476 0.22 T 01-11-2018 IPR011717 Tetratricopeptide TPR-4 GO:0042802 D3790_17155 dfcd795ef46c7f4ea9e947578f647801 904 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 3.6E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_17155 dfcd795ef46c7f4ea9e947578f647801 904 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 3.6E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_17155 dfcd795ef46c7f4ea9e947578f647801 904 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 3.6E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_17155 dfcd795ef46c7f4ea9e947578f647801 904 Gene3D G3DSA:1.25.40.10 443 807 1.1E-80 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_17155 dfcd795ef46c7f4ea9e947578f647801 904 SUPERFAMILY SSF48452 443 806 6.48E-145 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_15310 9a6f2d0b04d9956a711ca3c9a26b158c 240 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 12 221 6.7E-73 T 01-11-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 D3790_15310 9a6f2d0b04d9956a711ca3c9a26b158c 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 5.9E-10 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D3790_15310 9a6f2d0b04d9956a711ca3c9a26b158c 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 5.9E-10 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D3790_15310 9a6f2d0b04d9956a711ca3c9a26b158c 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 5.9E-10 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D3790_15310 9a6f2d0b04d9956a711ca3c9a26b158c 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 5.9E-10 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D3790_15310 9a6f2d0b04d9956a711ca3c9a26b158c 240 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 194 1.5E-37 T 01-11-2018 D3790_15310 9a6f2d0b04d9956a711ca3c9a26b158c 240 SUPERFAMILY SSF56784 4 223 4.76E-60 T 01-11-2018 IPR036412 HAD-like superfamily D3790_15310 9a6f2d0b04d9956a711ca3c9a26b158c 240 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 194 4.5E-8 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D3790_15310 9a6f2d0b04d9956a711ca3c9a26b158c 240 Gene3D G3DSA:1.10.150.240 24 94 1.1E-63 T 01-11-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D3790_15310 9a6f2d0b04d9956a711ca3c9a26b158c 240 Gene3D G3DSA:3.40.50.1000 12 217 1.1E-63 T 01-11-2018 IPR023214 HAD superfamily D3790_15310 9a6f2d0b04d9956a711ca3c9a26b158c 240 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 9 225 35.506 T 01-11-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 D3790_15310 9a6f2d0b04d9956a711ca3c9a26b158c 240 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 189 4.8E-10 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D3790_19345 0bf0dff9ae995492177ed17b4c647dfb 250 SUPERFAMILY SSF49354 27 144 2.56E-39 T 01-11-2018 IPR008962 PapD-like superfamily D3790_19345 0bf0dff9ae995492177ed17b4c647dfb 250 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 102 119 - T 01-11-2018 IPR018046 Pili assembly chaperone, conserved site D3790_19345 0bf0dff9ae995492177ed17b4c647dfb 250 SUPERFAMILY SSF49584 153 244 5.36E-25 T 01-11-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily D3790_19345 0bf0dff9ae995492177ed17b4c647dfb 250 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 144 8.2E-39 T 01-11-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 D3790_19345 0bf0dff9ae995492177ed17b4c647dfb 250 Gene3D G3DSA:2.60.40.10 26 144 7.2E-42 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_19345 0bf0dff9ae995492177ed17b4c647dfb 250 PRINTS PR00969 Pili chaperone signature 103 120 3.5E-35 T 01-11-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 D3790_19345 0bf0dff9ae995492177ed17b4c647dfb 250 PRINTS PR00969 Pili chaperone signature 165 180 3.5E-35 T 01-11-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 D3790_19345 0bf0dff9ae995492177ed17b4c647dfb 250 PRINTS PR00969 Pili chaperone signature 27 36 3.5E-35 T 01-11-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 D3790_19345 0bf0dff9ae995492177ed17b4c647dfb 250 PRINTS PR00969 Pili chaperone signature 126 141 3.5E-35 T 01-11-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 D3790_19345 0bf0dff9ae995492177ed17b4c647dfb 250 PRINTS PR00969 Pili chaperone signature 73 94 3.5E-35 T 01-11-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 D3790_19345 0bf0dff9ae995492177ed17b4c647dfb 250 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 170 231 7.7E-17 T 01-11-2018 IPR016148 Pili assembly chaperone, C-terminal D3790_19345 0bf0dff9ae995492177ed17b4c647dfb 250 Gene3D G3DSA:2.60.40.10 150 243 7.5E-23 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_05425 445ef4f8f93d8f28641ba0d21862cd46 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 8.3E-81 T 01-11-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 D3790_05425 445ef4f8f93d8f28641ba0d21862cd46 212 SUPERFAMILY SSF53328 2 206 5.49E-68 T 01-11-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D3790_05425 445ef4f8f93d8f28641ba0d21862cd46 212 Pfam PF00551 Formyl transferase 2 182 6.9E-67 T 01-11-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D3790_05425 445ef4f8f93d8f28641ba0d21862cd46 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 01-11-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D3790_05425 445ef4f8f93d8f28641ba0d21862cd46 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.121 T 01-11-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 D3790_05425 445ef4f8f93d8f28641ba0d21862cd46 212 Gene3D G3DSA:3.40.50.170 2 212 6.9E-87 T 01-11-2018 D3790_11800 debd06564e14746e9fa2ecd46c2260aa 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 259 266 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 D3790_11800 debd06564e14746e9fa2ecd46c2260aa 494 Gene3D G3DSA:3.40.309.10 264 457 7.3E-174 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D3790_11800 debd06564e14746e9fa2ecd46c2260aa 494 Pfam PF00171 Aldehyde dehydrogenase family 25 487 7.0E-170 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D3790_11800 debd06564e14746e9fa2ecd46c2260aa 494 Gene3D G3DSA:3.40.605.10 21 485 7.3E-174 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D3790_11800 debd06564e14746e9fa2ecd46c2260aa 494 SUPERFAMILY SSF53720 14 490 3.53E-168 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D3790_01525 84ab07a431a2fe44413b3eef42c50010 151 Pfam PF00583 Acetyltransferase (GNAT) family 20 120 2.4E-18 T 01-11-2018 IPR000182 GNAT domain D3790_01525 84ab07a431a2fe44413b3eef42c50010 151 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 15 142 3.1E-42 T 01-11-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 D3790_01525 84ab07a431a2fe44413b3eef42c50010 151 SUPERFAMILY SSF55729 4 146 1.77E-30 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_01525 84ab07a431a2fe44413b3eef42c50010 151 Gene3D G3DSA:3.40.630.30 1 147 4.4E-44 T 01-11-2018 D3790_18065 71703bb16bca2e1e132d3f7010ceaae7 750 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 467 2.0E-131 T 01-11-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D3790_18065 71703bb16bca2e1e132d3f7010ceaae7 750 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 9 743 0.0 T 01-11-2018 D3790_18065 71703bb16bca2e1e132d3f7010ceaae7 750 Gene3D G3DSA:1.10.268.10 345 484 7.7E-44 T 01-11-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 D3790_18065 71703bb16bca2e1e132d3f7010ceaae7 750 SMART SM00434 12 462 1.1E-230 T 01-11-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D3790_18065 71703bb16bca2e1e132d3f7010ceaae7 750 SUPERFAMILY SSF56719 32 483 1.44E-152 T 01-11-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 D3790_18065 71703bb16bca2e1e132d3f7010ceaae7 750 SUPERFAMILY SSF101904 499 742 1.83E-50 T 01-11-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal D3790_18065 71703bb16bca2e1e132d3f7010ceaae7 750 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 697 2.7E-7 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D3790_18065 71703bb16bca2e1e132d3f7010ceaae7 750 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 634 3.6E-4 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D3790_18065 71703bb16bca2e1e132d3f7010ceaae7 750 Gene3D G3DSA:2.120.10.90 501 731 2.5E-13 T 01-11-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal D3790_18065 71703bb16bca2e1e132d3f7010ceaae7 750 Gene3D G3DSA:3.30.1360.40 163 344 3.1E-71 T 01-11-2018 D3790_18065 71703bb16bca2e1e132d3f7010ceaae7 750 Gene3D G3DSA:3.90.199.10 31 162 1.0E-58 T 01-11-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 D3790_18065 71703bb16bca2e1e132d3f7010ceaae7 750 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 744 33.832 T 01-11-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_18125 1402e2d3209659ec60bd84f5f0af08ab 969 Gene3D G3DSA:3.40.50.10810 634 713 2.9E-5 T 01-11-2018 IPR038718 SNF2-like, N-terminal domain superfamily D3790_18125 1402e2d3209659ec60bd84f5f0af08ab 969 Gene3D G3DSA:3.40.50.10810 150 429 9.8E-105 T 01-11-2018 IPR038718 SNF2-like, N-terminal domain superfamily D3790_18125 1402e2d3209659ec60bd84f5f0af08ab 969 Gene3D G3DSA:2.30.30.930 55 114 5.9E-28 T 01-11-2018 D3790_18125 1402e2d3209659ec60bd84f5f0af08ab 969 Gene3D G3DSA:3.40.50.300 430 633 1.5E-50 T 01-11-2018 D3790_18125 1402e2d3209659ec60bd84f5f0af08ab 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.06 T 01-11-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 D3790_18125 1402e2d3209659ec60bd84f5f0af08ab 969 SMART SM00490 518 602 2.0E-16 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_18125 1402e2d3209659ec60bd84f5f0af08ab 969 Pfam PF00271 Helicase conserved C-terminal domain 494 602 3.4E-15 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_18125 1402e2d3209659ec60bd84f5f0af08ab 969 Pfam PF00176 SNF2 family N-terminal domain 174 441 6.8E-19 T 01-11-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 D3790_18125 1402e2d3209659ec60bd84f5f0af08ab 969 SUPERFAMILY SSF52540 273 644 1.78E-43 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_18125 1402e2d3209659ec60bd84f5f0af08ab 969 Pfam PF12137 RNA polymerase recycling family C-terminal 606 966 1.3E-156 T 01-11-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 D3790_18125 1402e2d3209659ec60bd84f5f0af08ab 969 Gene3D G3DSA:2.30.30.140 1 53 7.1E-24 T 01-11-2018 D3790_18125 1402e2d3209659ec60bd84f5f0af08ab 969 SMART SM00487 150 342 1.7E-20 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_18125 1402e2d3209659ec60bd84f5f0af08ab 969 Gene3D G3DSA:3.30.360.80 714 787 9.5E-32 T 01-11-2018 D3790_18125 1402e2d3209659ec60bd84f5f0af08ab 969 SUPERFAMILY SSF52540 136 368 6.24E-38 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_08275 54b2256fd85afeb2b483e55ef006ffe4 121 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 59 101 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 D3790_08275 54b2256fd85afeb2b483e55ef006ffe4 121 Gene3D G3DSA:1.10.10.60 57 114 1.5E-19 T 01-11-2018 D3790_08275 54b2256fd85afeb2b483e55ef006ffe4 121 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 74 89 2.0E-8 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D3790_08275 54b2256fd85afeb2b483e55ef006ffe4 121 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 89 105 2.0E-8 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D3790_08275 54b2256fd85afeb2b483e55ef006ffe4 121 SUPERFAMILY SSF46689 58 109 2.37E-15 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_08275 54b2256fd85afeb2b483e55ef006ffe4 121 SUPERFAMILY SSF46689 5 56 6.27E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_08275 54b2256fd85afeb2b483e55ef006ffe4 121 Pfam PF12833 Helix-turn-helix domain 28 106 7.7E-25 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D3790_08275 54b2256fd85afeb2b483e55ef006ffe4 121 SMART SM00342 22 105 1.5E-35 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D3790_08275 54b2256fd85afeb2b483e55ef006ffe4 121 Gene3D G3DSA:1.10.10.60 3 56 2.0E-22 T 01-11-2018 D3790_13790 4bbae0962caea85fab024f60931c9726 238 Pfam PF00702 haloacid dehalogenase-like hydrolase 12 197 1.7E-13 T 01-11-2018 D3790_13790 4bbae0962caea85fab024f60931c9726 238 Gene3D G3DSA:1.20.120.1600 24 110 5.8E-56 T 01-11-2018 D3790_13790 4bbae0962caea85fab024f60931c9726 238 Gene3D G3DSA:3.40.50.1000 12 231 5.8E-56 T 01-11-2018 IPR023214 HAD superfamily D3790_13790 4bbae0962caea85fab024f60931c9726 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 113 200 2.3E-11 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D3790_13790 4bbae0962caea85fab024f60931c9726 238 SUPERFAMILY SSF56784 11 238 4.52E-39 T 01-11-2018 IPR036412 HAD-like superfamily D3790_05645 f19b7735331e719f4f99c1edc94644f9 522 SMART SM00382 224 371 2.5E-5 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_05645 f19b7735331e719f4f99c1edc94644f9 522 Pfam PF00989 PAS fold 84 154 1.2E-6 T 01-11-2018 IPR013767 PAS fold GO:0006355 D3790_05645 f19b7735331e719f4f99c1edc94644f9 522 Gene3D G3DSA:3.30.450.20 83 189 2.1E-26 T 01-11-2018 D3790_05645 f19b7735331e719f4f99c1edc94644f9 522 Gene3D G3DSA:3.40.50.300 190 374 7.0E-60 T 01-11-2018 D3790_05645 f19b7735331e719f4f99c1edc94644f9 522 Gene3D G3DSA:3.30.70.260 1 81 4.1E-26 T 01-11-2018 D3790_05645 f19b7735331e719f4f99c1edc94644f9 522 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 84 130 4.6E-7 T 01-11-2018 IPR000014 PAS domain D3790_05645 f19b7735331e719f4f99c1edc94644f9 522 Pfam PF00158 Sigma-54 interaction domain 205 370 8.1E-61 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D3790_05645 f19b7735331e719f4f99c1edc94644f9 522 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 464 511 1.6E-27 T 01-11-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 D3790_05645 f19b7735331e719f4f99c1edc94644f9 522 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3790_05645 f19b7735331e719f4f99c1edc94644f9 522 SUPERFAMILY SSF55785 84 170 6.11E-9 T 01-11-2018 IPR035965 PAS domain superfamily D3790_05645 f19b7735331e719f4f99c1edc94644f9 522 SUPERFAMILY SSF52540 204 445 2.47E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05645 f19b7735331e719f4f99c1edc94644f9 522 SMART SM00091 80 146 8.8E-7 T 01-11-2018 IPR000014 PAS domain D3790_05645 f19b7735331e719f4f99c1edc94644f9 522 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site D3790_05645 f19b7735331e719f4f99c1edc94644f9 522 Gene3D G3DSA:1.10.8.60 375 442 2.5E-19 T 01-11-2018 D3790_05645 f19b7735331e719f4f99c1edc94644f9 522 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 228 241 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3790_05645 f19b7735331e719f4f99c1edc94644f9 522 SUPERFAMILY SSF46689 459 511 2.87E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_05645 f19b7735331e719f4f99c1edc94644f9 522 Gene3D G3DSA:1.10.10.60 454 512 5.1E-26 T 01-11-2018 D3790_10030 2d580c8b1bc034608511367f146d51a3 375 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 208 372 2.6E-15 T 01-11-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 D3790_10030 2d580c8b1bc034608511367f146d51a3 375 Gene3D G3DSA:3.40.50.150 14 368 3.4E-82 T 01-11-2018 D3790_10030 2d580c8b1bc034608511367f146d51a3 375 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 373 3.3E-196 T 01-11-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 D3790_10030 2d580c8b1bc034608511367f146d51a3 375 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 01-11-2018 IPR030391 RNA methyltransferase TrmA, conserved site D3790_10030 2d580c8b1bc034608511367f146d51a3 375 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 3 367 8.5E-62 T 01-11-2018 D3790_10030 2d580c8b1bc034608511367f146d51a3 375 Gene3D G3DSA:3.40.1350.30 56 211 3.4E-82 T 01-11-2018 D3790_10030 2d580c8b1bc034608511367f146d51a3 375 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 77.763 T 01-11-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 D3790_10030 2d580c8b1bc034608511367f146d51a3 375 SUPERFAMILY SSF53335 7 372 6.06E-56 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_10030 2d580c8b1bc034608511367f146d51a3 375 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 01-11-2018 IPR030390 RNA methyltransferase TrmA, active site D3790_01860 648e834c0d21aaff71b967e79f858111 503 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 4 484 2.4E-208 T 01-11-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 D3790_01860 648e834c0d21aaff71b967e79f858111 503 Gene3D G3DSA:3.40.605.10 24 461 6.9E-152 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D3790_01860 648e834c0d21aaff71b967e79f858111 503 Gene3D G3DSA:3.40.309.10 249 453 6.9E-152 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D3790_01860 648e834c0d21aaff71b967e79f858111 503 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 D3790_01860 648e834c0d21aaff71b967e79f858111 503 Pfam PF00171 Aldehyde dehydrogenase family 14 480 3.4E-140 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D3790_01860 648e834c0d21aaff71b967e79f858111 503 SUPERFAMILY SSF53720 2 484 3.14E-149 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D3790_10435 e86d17740e79fcfbf36325a066f39b18 535 SUPERFAMILY SSF56801 21 534 9.29E-109 T 01-11-2018 D3790_10435 e86d17740e79fcfbf36325a066f39b18 535 Pfam PF13193 AMP-binding enzyme C-terminal domain 449 523 7.0E-13 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_10435 e86d17740e79fcfbf36325a066f39b18 535 Gene3D G3DSA:3.30.300.310 436 535 8.7E-27 T 01-11-2018 D3790_10435 e86d17740e79fcfbf36325a066f39b18 535 Gene3D G3DSA:3.40.50.12780 4 435 2.2E-80 T 01-11-2018 D3790_10435 e86d17740e79fcfbf36325a066f39b18 535 Pfam PF00501 AMP-binding enzyme 24 440 5.2E-70 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_16520 e450135c4486f8664ba2ff7210160122 392 Pfam PF04055 Radical SAM superfamily 18 169 1.6E-9 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D3790_16520 e450135c4486f8664ba2ff7210160122 392 SUPERFAMILY SSF102114 14 343 2.09E-33 T 01-11-2018 D3790_16520 e450135c4486f8664ba2ff7210160122 392 TIGRFAM TIGR04496 rSAM_XyeB: radical SAM/SPASM domain peptide maturase, XyeB family 9 392 7.7E-240 T 01-11-2018 IPR030989 Radical SAM/SPASM domain peptide maturase, XyeB family D3790_16520 e450135c4486f8664ba2ff7210160122 392 Pfam PF13394 4Fe-4S single cluster domain 21 115 1.0E-4 T 01-11-2018 D3790_16520 e450135c4486f8664ba2ff7210160122 392 Gene3D G3DSA:3.20.20.70 11 380 6.5E-74 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_16520 e450135c4486f8664ba2ff7210160122 392 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 18 29 - T 01-11-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D3790_07610 405c28c85580bf6609be5b55aeda9c2b 269 Pfam PF13369 Transglutaminase-like superfamily 35 183 5.0E-37 T 01-11-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 D3790_07610 405c28c85580bf6609be5b55aeda9c2b 269 Pfam PF13371 Tetratricopeptide repeat 187 259 1.1E-24 T 01-11-2018 D3790_02965 f0d528b6f0640983c068a2ce84afcc0b 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 2.9E-48 T 01-11-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 D3790_02965 f0d528b6f0640983c068a2ce84afcc0b 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 2.9E-48 T 01-11-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 D3790_02965 f0d528b6f0640983c068a2ce84afcc0b 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 2.9E-48 T 01-11-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 D3790_02965 f0d528b6f0640983c068a2ce84afcc0b 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 2.9E-48 T 01-11-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 D3790_02965 f0d528b6f0640983c068a2ce84afcc0b 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 2.9E-48 T 01-11-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 D3790_02965 f0d528b6f0640983c068a2ce84afcc0b 171 SUPERFAMILY SSF63411 4 162 2.93E-65 T 01-11-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D3790_02965 f0d528b6f0640983c068a2ce84afcc0b 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 34.497 T 01-11-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 D3790_02965 f0d528b6f0640983c068a2ce84afcc0b 171 PIRSF PIRSF006160 1 162 2.9E-64 T 01-11-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 D3790_02965 f0d528b6f0640983c068a2ce84afcc0b 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 153 1.4E-60 T 01-11-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 D3790_02965 f0d528b6f0640983c068a2ce84afcc0b 171 Gene3D G3DSA:3.30.1360.80 1 171 2.5E-70 T 01-11-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 D3790_02965 f0d528b6f0640983c068a2ce84afcc0b 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 3.0E-74 T 01-11-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 D3790_17480 ac2a81dd0e33851c65b4c31f1224c4f8 295 SUPERFAMILY SSF46785 1 111 3.22E-27 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_17480 ac2a81dd0e33851c65b4c31f1224c4f8 295 Pfam PF03466 LysR substrate binding domain 90 288 1.9E-48 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_17480 ac2a81dd0e33851c65b4c31f1224c4f8 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.9E-12 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_17480 ac2a81dd0e33851c65b4c31f1224c4f8 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.9E-12 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_17480 ac2a81dd0e33851c65b4c31f1224c4f8 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.9E-12 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_17480 ac2a81dd0e33851c65b4c31f1224c4f8 295 SUPERFAMILY SSF53850 90 292 6.84E-46 T 01-11-2018 D3790_17480 ac2a81dd0e33851c65b4c31f1224c4f8 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.9E-24 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_17480 ac2a81dd0e33851c65b4c31f1224c4f8 295 Gene3D G3DSA:3.40.190.290 93 293 7.3E-64 T 01-11-2018 D3790_17480 ac2a81dd0e33851c65b4c31f1224c4f8 295 Gene3D G3DSA:1.10.10.10 1 92 1.3E-30 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_02435 0945af70104d98a56b8c5ba5955419d4 373 SUPERFAMILY SSF51604 23 139 8.83E-10 T 01-11-2018 IPR036849 Enolase-like, C-terminal domain superfamily D3790_02435 0945af70104d98a56b8c5ba5955419d4 373 SUPERFAMILY SSF56014 265 354 8.0E-11 T 01-11-2018 D3790_02435 0945af70104d98a56b8c5ba5955419d4 373 Pfam PF04551 GcpE protein 14 354 2.8E-131 T 01-11-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 D3790_02435 0945af70104d98a56b8c5ba5955419d4 373 PIRSF PIRSF004640 1 364 1.2E-146 T 01-11-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 D3790_02435 0945af70104d98a56b8c5ba5955419d4 373 Gene3D G3DSA:3.20.20.20 1 261 1.4E-105 T 01-11-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D3790_02435 0945af70104d98a56b8c5ba5955419d4 373 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.015 T 01-11-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 D3790_02435 0945af70104d98a56b8c5ba5955419d4 373 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 352 5.1E-127 T 01-11-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 D3790_02435 0945af70104d98a56b8c5ba5955419d4 373 Gene3D G3DSA:3.30.413.10 262 360 9.0E-23 T 01-11-2018 D3790_09360 8b4ca52ff99ccb934ea9463b39e85c85 361 Gene3D G3DSA:3.30.360.10 131 303 1.2E-8 T 01-11-2018 D3790_09360 8b4ca52ff99ccb934ea9463b39e85c85 361 Gene3D G3DSA:3.40.50.720 1 112 8.2E-5 T 01-11-2018 D3790_09360 8b4ca52ff99ccb934ea9463b39e85c85 361 SUPERFAMILY SSF51735 3 130 1.11E-8 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_08245 9a77c6c010005f995ba2efce617b215a 679 Gene3D G3DSA:2.170.130.10 44 167 1.5E-36 T 01-11-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D3790_08245 9a77c6c010005f995ba2efce617b215a 679 Pfam PF00593 TonB dependent receptor 245 677 1.6E-41 T 01-11-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D3790_08245 9a77c6c010005f995ba2efce617b215a 679 Gene3D G3DSA:2.40.170.20 168 679 4.3E-116 T 01-11-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3790_08245 9a77c6c010005f995ba2efce617b215a 679 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 45 679 4.8E-124 T 01-11-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 D3790_08245 9a77c6c010005f995ba2efce617b215a 679 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 162 2.0E-19 T 01-11-2018 IPR012910 TonB-dependent receptor, plug domain D3790_08245 9a77c6c010005f995ba2efce617b215a 679 SUPERFAMILY SSF56935 45 679 1.47E-92 T 01-11-2018 D3790_08245 9a77c6c010005f995ba2efce617b215a 679 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 52 - T 01-11-2018 IPR010916 TonB box, conserved site D3790_08245 9a77c6c010005f995ba2efce617b215a 679 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 45 679 4.9E-163 T 01-11-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 D3790_09955 8559a9b91baf13fab6681996f8c1d1d4 164 SUPERFAMILY SSF46785 12 70 7.86E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_09955 8559a9b91baf13fab6681996f8c1d1d4 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 58 4.6E-21 T 01-11-2018 D3790_09955 8559a9b91baf13fab6681996f8c1d1d4 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 D3790_09955 8559a9b91baf13fab6681996f8c1d1d4 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 D3790_09955 8559a9b91baf13fab6681996f8c1d1d4 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 D3790_09955 8559a9b91baf13fab6681996f8c1d1d4 164 SUPERFAMILY SSF54909 74 157 4.16E-22 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel D3790_09955 8559a9b91baf13fab6681996f8c1d1d4 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 3.1E-24 T 01-11-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain D3790_09955 8559a9b91baf13fab6681996f8c1d1d4 164 SMART SM00344 12 121 2.4E-54 T 01-11-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 D3790_09955 8559a9b91baf13fab6681996f8c1d1d4 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 01-11-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site D3790_09955 8559a9b91baf13fab6681996f8c1d1d4 164 Gene3D G3DSA:1.10.10.10 1 63 2.4E-32 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_09955 8559a9b91baf13fab6681996f8c1d1d4 164 Gene3D G3DSA:3.30.70.920 64 159 3.3E-25 T 01-11-2018 D3790_10730 4894878845c956ca3130a0b08654681b 395 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 291 304 - T 01-11-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 D3790_10730 4894878845c956ca3130a0b08654681b 395 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 2 387 1.3E-145 T 01-11-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 D3790_10730 4894878845c956ca3130a0b08654681b 395 SUPERFAMILY SSF51905 1 381 4.03E-51 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_10730 4894878845c956ca3130a0b08654681b 395 Gene3D G3DSA:3.50.50.60 3 335 2.9E-95 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_10730 4894878845c956ca3130a0b08654681b 395 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 2 387 1.1E-129 T 01-11-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 D3790_10730 4894878845c956ca3130a0b08654681b 395 Gene3D G3DSA:3.30.9.50 77 266 2.9E-95 T 01-11-2018 D3790_10730 4894878845c956ca3130a0b08654681b 395 Pfam PF01494 FAD binding domain 2 319 1.9E-22 T 01-11-2018 IPR002938 FAD-binding domain GO:0071949 D3790_10730 4894878845c956ca3130a0b08654681b 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 4.1E-13 T 01-11-2018 D3790_10730 4894878845c956ca3130a0b08654681b 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 4.1E-13 T 01-11-2018 D3790_10730 4894878845c956ca3130a0b08654681b 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 4.1E-13 T 01-11-2018 D3790_10730 4894878845c956ca3130a0b08654681b 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 4.1E-13 T 01-11-2018 D3790_11560 3b463547c738434ccd770647bf5cb321 211 SUPERFAMILY SSF52266 30 206 6.41E-47 T 01-11-2018 D3790_11560 3b463547c738434ccd770647bf5cb321 211 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 34 192 8.8E-23 T 01-11-2018 IPR013830 SGNH hydrolase-type esterase domain D3790_11560 3b463547c738434ccd770647bf5cb321 211 Gene3D G3DSA:3.40.50.1110 28 211 2.6E-66 T 01-11-2018 IPR036514 SGNH hydrolase superfamily D3790_11560 3b463547c738434ccd770647bf5cb321 211 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 31 41 - T 01-11-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 D3790_05340 935c83ca9f8951b70777b43a28663d15 128 SUPERFAMILY SSF46689 60 110 2.06E-14 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_05340 935c83ca9f8951b70777b43a28663d15 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 1.6E-7 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D3790_05340 935c83ca9f8951b70777b43a28663d15 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 1.6E-7 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D3790_05340 935c83ca9f8951b70777b43a28663d15 128 SUPERFAMILY SSF46689 10 59 7.79E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_05340 935c83ca9f8951b70777b43a28663d15 128 Gene3D G3DSA:1.10.10.60 8 56 1.9E-20 T 01-11-2018 D3790_05340 935c83ca9f8951b70777b43a28663d15 128 Gene3D G3DSA:1.10.10.60 57 113 3.8E-17 T 01-11-2018 D3790_05340 935c83ca9f8951b70777b43a28663d15 128 SMART SM00342 24 107 2.7E-28 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D3790_05340 935c83ca9f8951b70777b43a28663d15 128 Pfam PF12833 Helix-turn-helix domain 30 108 1.9E-23 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D3790_05340 935c83ca9f8951b70777b43a28663d15 128 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 61 103 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 D3790_15440 e089089218a04c04ec8364cd993d1f75 274 Gene3D G3DSA:1.20.120.220 98 274 2.4E-68 T 01-11-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15440 e089089218a04c04ec8364cd993d1f75 274 SUPERFAMILY SSF81336 98 268 2.09E-48 T 01-11-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15440 e089089218a04c04ec8364cd993d1f75 274 Hamap MF_01393 ATP synthase subunit a [atpB]. 13 274 16.058 T 01-11-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15440 e089089218a04c04ec8364cd993d1f75 274 PRINTS PR00123 ATP synthase A subunit signature 107 123 8.3E-15 T 01-11-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15440 e089089218a04c04ec8364cd993d1f75 274 PRINTS PR00123 ATP synthase A subunit signature 254 269 8.3E-15 T 01-11-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15440 e089089218a04c04ec8364cd993d1f75 274 PRINTS PR00123 ATP synthase A subunit signature 206 228 8.3E-15 T 01-11-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15440 e089089218a04c04ec8364cd993d1f75 274 Pfam PF00119 ATP synthase A chain 52 268 3.9E-55 T 01-11-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15440 e089089218a04c04ec8364cd993d1f75 274 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 41 269 3.8E-43 T 01-11-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15440 e089089218a04c04ec8364cd993d1f75 274 ProSitePatterns PS00449 ATP synthase a subunit signature. 209 218 - T 01-11-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_01155 edcb7a130475a1dae45bb7ad5bbfaef8 259 SUPERFAMILY SSF55821 7 189 1.01E-19 T 01-11-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily D3790_01155 edcb7a130475a1dae45bb7ad5bbfaef8 259 Pfam PF01300 Telomere recombination 22 185 4.7E-9 T 01-11-2018 IPR006070 YrdC-like domain GO:0003725 D3790_01155 edcb7a130475a1dae45bb7ad5bbfaef8 259 Gene3D G3DSA:3.90.870.10 1 259 1.5E-99 T 01-11-2018 D3790_18665 90152d419518dcc51e081a0f77c2657a 532 PIRSF PIRSF001363 1 532 6.0E-248 T 01-11-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 D3790_18665 90152d419518dcc51e081a0f77c2657a 532 SUPERFAMILY SSF51645 20 531 1.83E-184 T 01-11-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 D3790_18665 90152d419518dcc51e081a0f77c2657a 532 Gene3D G3DSA:1.20.1220.12 411 532 5.0E-48 T 01-11-2018 D3790_18665 90152d419518dcc51e081a0f77c2657a 532 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 23 531 5.4E-247 T 01-11-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 D3790_18665 90152d419518dcc51e081a0f77c2657a 532 Gene3D G3DSA:3.20.20.360 2 410 1.9E-189 T 01-11-2018 D3790_18665 90152d419518dcc51e081a0f77c2657a 532 Pfam PF01274 Malate synthase 12 531 1.8E-202 T 01-11-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 D3790_09740 2e547db68a35e42c17db89c34220440a 636 SUPERFAMILY SSF52540 10 237 3.07E-45 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09740 2e547db68a35e42c17db89c34220440a 636 SUPERFAMILY SSF52540 322 512 1.56E-45 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09740 2e547db68a35e42c17db89c34220440a 636 Gene3D G3DSA:3.40.50.300 12 279 1.5E-65 T 01-11-2018 D3790_09740 2e547db68a35e42c17db89c34220440a 636 Pfam PF00005 ABC transporter 335 469 2.4E-24 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_09740 2e547db68a35e42c17db89c34220440a 636 Pfam PF12848 ABC transporter 224 298 4.3E-11 T 01-11-2018 IPR032781 ABC-transporter extension domain D3790_09740 2e547db68a35e42c17db89c34220440a 636 Pfam PF00005 ABC transporter 19 185 2.9E-21 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_09740 2e547db68a35e42c17db89c34220440a 636 Gene3D G3DSA:3.40.50.300 283 551 1.3E-65 T 01-11-2018 D3790_09740 2e547db68a35e42c17db89c34220440a 636 Pfam PF16326 ABC transporter C-terminal domain 563 631 4.7E-17 T 01-11-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 D3790_09740 2e547db68a35e42c17db89c34220440a 636 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_09740 2e547db68a35e42c17db89c34220440a 636 Gene3D G3DSA:1.10.287.380 554 636 1.8E-25 T 01-11-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 D3790_09740 2e547db68a35e42c17db89c34220440a 636 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_09740 2e547db68a35e42c17db89c34220440a 636 SMART SM00382 344 515 1.7E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_09740 2e547db68a35e42c17db89c34220440a 636 SMART SM00382 28 230 2.9E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_10895 f5412dc8404ae8b0d207933245f96fd6 65 Gene3D G3DSA:3.30.50.10 1 65 6.2E-27 T 01-11-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 D3790_10895 f5412dc8404ae8b0d207933245f96fd6 65 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.921 T 01-11-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 D3790_10895 f5412dc8404ae8b0d207933245f96fd6 65 Pfam PF03884 DNA gyrase inhibitor YacG 7 57 3.3E-24 T 01-11-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 D3790_10895 f5412dc8404ae8b0d207933245f96fd6 65 SUPERFAMILY SSF57716 2 61 6.41E-22 T 01-11-2018 D3790_03660 b20750527b36cdea1b2ef1a6126bec68 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 3.4E-37 T 01-11-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 D3790_03660 b20750527b36cdea1b2ef1a6126bec68 115 PIRSF PIRSF000169 1 115 8.6E-42 T 01-11-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 D3790_03660 b20750527b36cdea1b2ef1a6126bec68 115 Gene3D G3DSA:1.20.1300.10 1 115 3.7E-31 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_03660 b20750527b36cdea1b2ef1a6126bec68 115 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 102 6.2E-6 T 01-11-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_03660 b20750527b36cdea1b2ef1a6126bec68 115 SUPERFAMILY SSF81343 5 114 5.67E-29 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_00735 9c13b7fb6f795c0b9aa72724eef8d877 231 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 38 228 1.5E-78 T 01-11-2018 IPR022293 Integrating conjugative element protein, PFL4693 D3790_03360 334b49ffc6db7f206cdd604d81a6afed 385 PIRSF PIRSF038994 1 385 1.2E-114 T 01-11-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 D3790_03360 334b49ffc6db7f206cdd604d81a6afed 385 Gene3D G3DSA:3.20.20.140 55 347 1.4E-128 T 01-11-2018 D3790_03360 334b49ffc6db7f206cdd604d81a6afed 385 Gene3D G3DSA:2.30.40.10 9 379 1.4E-128 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D3790_03360 334b49ffc6db7f206cdd604d81a6afed 385 SUPERFAMILY SSF51338 1 53 4.32E-17 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D3790_03360 334b49ffc6db7f206cdd604d81a6afed 385 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 380 6.7E-155 T 01-11-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 D3790_03360 334b49ffc6db7f206cdd604d81a6afed 385 Pfam PF01979 Amidohydrolase family 51 382 6.1E-39 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 D3790_03360 334b49ffc6db7f206cdd604d81a6afed 385 SUPERFAMILY SSF51556 54 353 1.2E-94 T 01-11-2018 IPR032466 Metal-dependent hydrolase D3790_02325 301fb3b0d1a5066ee4647f41a2502a00 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 01-11-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 D3790_02325 301fb3b0d1a5066ee4647f41a2502a00 417 Pfam PF00464 Serine hydroxymethyltransferase 9 386 1.2E-186 T 01-11-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 D3790_02325 301fb3b0d1a5066ee4647f41a2502a00 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.997 T 01-11-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 D3790_02325 301fb3b0d1a5066ee4647f41a2502a00 417 PIRSF PIRSF000412 1 417 5.8E-172 T 01-11-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 D3790_02325 301fb3b0d1a5066ee4647f41a2502a00 417 SUPERFAMILY SSF53383 6 416 2.58E-184 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_02325 301fb3b0d1a5066ee4647f41a2502a00 417 Gene3D G3DSA:3.90.1150.10 10 395 1.3E-186 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_02325 301fb3b0d1a5066ee4647f41a2502a00 417 Gene3D G3DSA:3.40.640.10 37 289 1.3E-186 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_05150 7babd26bcc19a8de54ee89eed670cc94 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 75 3.4E-36 T 01-11-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 D3790_05150 7babd26bcc19a8de54ee89eed670cc94 78 SUPERFAMILY SSF47336 2 75 1.57E-22 T 01-11-2018 IPR036736 ACP-like superfamily D3790_05150 7babd26bcc19a8de54ee89eed670cc94 78 SMART SM00823 Phosphopantetheine attachment site 5 63 0.0078 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_05150 7babd26bcc19a8de54ee89eed670cc94 78 Gene3D G3DSA:1.10.1200.10 2 78 1.6E-29 T 01-11-2018 IPR036736 ACP-like superfamily D3790_05150 7babd26bcc19a8de54ee89eed670cc94 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_05150 7babd26bcc19a8de54ee89eed670cc94 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 75 0.003 T 01-11-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 D3790_05150 7babd26bcc19a8de54ee89eed670cc94 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.0E-16 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_05150 7babd26bcc19a8de54ee89eed670cc94 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.489 T 01-11-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 D3790_10150 ebc368c37b2b1629cf4c8349d4bed2be 526 Gene3D G3DSA:3.10.580.10 284 436 7.2E-39 T 01-11-2018 D3790_10150 ebc368c37b2b1629cf4c8349d4bed2be 526 SMART SM01091 440 519 7.7E-22 T 01-11-2018 IPR005170 Transporter-associated domain D3790_10150 ebc368c37b2b1629cf4c8349d4bed2be 526 Pfam PF00571 CBS domain 303 359 0.002 T 01-11-2018 IPR000644 CBS domain D3790_10150 ebc368c37b2b1629cf4c8349d4bed2be 526 Pfam PF00571 CBS domain 375 422 9.8E-7 T 01-11-2018 IPR000644 CBS domain D3790_10150 ebc368c37b2b1629cf4c8349d4bed2be 526 SUPERFAMILY SSF54631 290 425 7.33E-26 T 01-11-2018 D3790_10150 ebc368c37b2b1629cf4c8349d4bed2be 526 Gene3D G3DSA:3.30.465.10 437 517 1.9E-18 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 D3790_10150 ebc368c37b2b1629cf4c8349d4bed2be 526 SUPERFAMILY SSF56176 438 523 2.62E-20 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 D3790_10150 ebc368c37b2b1629cf4c8349d4bed2be 526 Pfam PF03741 Integral membrane protein TerC family 15 203 2.1E-51 T 01-11-2018 IPR005496 Integral membrane protein TerC GO:0016021 D3790_10150 ebc368c37b2b1629cf4c8349d4bed2be 526 Pfam PF03471 Transporter associated domain 442 517 1.2E-17 T 01-11-2018 IPR005170 Transporter-associated domain D3790_19100 ae34312c854b4468f9308ebec0efd7c4 483 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 6.4E-48 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 D3790_19100 ae34312c854b4468f9308ebec0efd7c4 483 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 7.7E-22 T 01-11-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D3790_19100 ae34312c854b4468f9308ebec0efd7c4 483 Gene3D G3DSA:3.30.950.10 332 476 1.7E-45 T 01-11-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 D3790_19100 ae34312c854b4468f9308ebec0efd7c4 483 Gene3D G3DSA:1.10.8.210 149 210 7.3E-16 T 01-11-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D3790_19100 ae34312c854b4468f9308ebec0efd7c4 483 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 1.1E-75 T 01-11-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D3790_19100 ae34312c854b4468f9308ebec0efd7c4 483 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 01-11-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D3790_19100 ae34312c854b4468f9308ebec0efd7c4 483 Pfam PF13241 Putative NAD(P)-binding 6 115 7.3E-27 T 01-11-2018 D3790_19100 ae34312c854b4468f9308ebec0efd7c4 483 Pfam PF14824 Sirohaem biosynthesis protein central 124 145 2.9E-6 T 01-11-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D3790_19100 ae34312c854b4468f9308ebec0efd7c4 483 SUPERFAMILY SSF53790 214 456 5.76E-79 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 D3790_19100 ae34312c854b4468f9308ebec0efd7c4 483 Gene3D G3DSA:3.40.1010.10 214 331 5.4E-45 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 D3790_19100 ae34312c854b4468f9308ebec0efd7c4 483 SUPERFAMILY SSF75615 114 209 8.5E-27 T 01-11-2018 D3790_19100 ae34312c854b4468f9308ebec0efd7c4 483 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 449 1.8E-90 T 01-11-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D3790_19100 ae34312c854b4468f9308ebec0efd7c4 483 SUPERFAMILY SSF51735 2 112 1.35E-22 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_19100 ae34312c854b4468f9308ebec0efd7c4 483 PIRSF PIRSF036426 1 466 5.9E-198 T 01-11-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D3790_19100 ae34312c854b4468f9308ebec0efd7c4 483 Gene3D G3DSA:3.40.50.720 1 112 4.3E-32 T 01-11-2018 D3790_19100 ae34312c854b4468f9308ebec0efd7c4 483 Gene3D G3DSA:3.30.160.110 113 148 2.0E-17 T 01-11-2018 D3790_19100 ae34312c854b4468f9308ebec0efd7c4 483 Hamap MF_01646 Siroheme synthase [cysG]. 1 458 51.244 T 01-11-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D3790_19100 ae34312c854b4468f9308ebec0efd7c4 483 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 01-11-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D3790_13060 0e2144a6258e84fca6e3832c87646098 262 Gene3D G3DSA:3.40.190.10 39 251 6.1E-74 T 01-11-2018 D3790_13060 0e2144a6258e84fca6e3832c87646098 262 SMART SM00062 40 259 6.3E-77 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3790_13060 0e2144a6258e84fca6e3832c87646098 262 SUPERFAMILY SSF53850 9 259 4.03E-70 T 01-11-2018 D3790_13060 0e2144a6258e84fca6e3832c87646098 262 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 63 76 - T 01-11-2018 IPR018313 Solute-binding protein family 3, conserved site D3790_13060 0e2144a6258e84fca6e3832c87646098 262 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 257 1.7E-66 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3790_13060 0e2144a6258e84fca6e3832c87646098 262 Gene3D G3DSA:3.40.190.10 123 220 6.1E-74 T 01-11-2018 D3790_13995 0e1723f419281c4d9fdd982f0bba8af6 308 Pfam PF01063 Amino-transferase class IV 35 267 5.6E-49 T 01-11-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 D3790_13995 0e1723f419281c4d9fdd982f0bba8af6 308 Gene3D G3DSA:3.30.470.10 9 126 9.7E-111 T 01-11-2018 D3790_13995 0e1723f419281c4d9fdd982f0bba8af6 308 Gene3D G3DSA:3.20.10.10 137 288 9.7E-111 T 01-11-2018 D3790_13995 0e1723f419281c4d9fdd982f0bba8af6 308 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 9 306 4.7E-144 T 01-11-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 D3790_13995 0e1723f419281c4d9fdd982f0bba8af6 308 ProSitePatterns PS00770 Aminotransferases class-IV signature. 193 222 - T 01-11-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 D3790_13995 0e1723f419281c4d9fdd982f0bba8af6 308 SUPERFAMILY SSF56752 6 306 3.01E-105 T 01-11-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 D3790_14395 23ba9117df3fcd6f2540ede02ffc2b0f 614 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 150 9.7E-29 T 01-11-2018 IPR012910 TonB-dependent receptor, plug domain D3790_14395 23ba9117df3fcd6f2540ede02ffc2b0f 614 SUPERFAMILY SSF56935 30 614 2.35E-119 T 01-11-2018 D3790_14395 23ba9117df3fcd6f2540ede02ffc2b0f 614 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 3 614 34.284 T 01-11-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 D3790_14395 23ba9117df3fcd6f2540ede02ffc2b0f 614 Gene3D G3DSA:2.170.130.10 24 155 9.2E-38 T 01-11-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D3790_14395 23ba9117df3fcd6f2540ede02ffc2b0f 614 Gene3D G3DSA:2.40.170.20 156 614 5.9E-146 T 01-11-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3790_14395 23ba9117df3fcd6f2540ede02ffc2b0f 614 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 12 614 1.4E-212 T 01-11-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 D3790_14395 23ba9117df3fcd6f2540ede02ffc2b0f 614 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 597 614 - T 01-11-2018 IPR010917 TonB-dependent receptor, conserved site D3790_14395 23ba9117df3fcd6f2540ede02ffc2b0f 614 Pfam PF00593 TonB dependent receptor 228 613 7.8E-48 T 01-11-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF52777 3275 3481 9.23E-51 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF47336 5365 5438 2.36E-17 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF00668 Condensation domain 1101 1546 6.7E-109 T 01-11-2018 IPR001242 Condensation domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF00668 Condensation domain 3280 3726 1.1E-111 T 01-11-2018 IPR001242 Condensation domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF00668 Condensation domain 2196 2647 5.7E-51 T 01-11-2018 IPR001242 Condensation domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF00668 Condensation domain 26 475 5.8E-67 T 01-11-2018 IPR001242 Condensation domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF00668 Condensation domain 4384 4836 1.6E-49 T 01-11-2018 IPR001242 Condensation domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:1.10.1200.10 1003 1090 2.2E-23 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF56801 454 1028 1.96E-165 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.30.559.10 4390 4766 5.0E-83 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.30.300.30 5253 5363 1.6E-33 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.30.300.30 901 1002 1.8E-36 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SMART SM00823 Phosphopantetheine attachment site 2082 2150 0.17 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SMART SM00823 Phosphopantetheine attachment site 5373 5442 0.017 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SMART SM00823 Phosphopantetheine attachment site 3195 3264 4.3E-4 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SMART SM00823 Phosphopantetheine attachment site 1016 1085 0.0076 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SMART SM00823 Phosphopantetheine attachment site 4270 4338 0.22 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3899 3910 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF00501 AMP-binding enzyme 3746 4160 7.7E-110 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF00501 AMP-binding enzyme 2668 3078 2.1E-106 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF00501 AMP-binding enzyme 496 906 3.2E-103 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF00501 AMP-binding enzyme 4856 5258 1.0E-101 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF00501 AMP-binding enzyme 1567 1971 6.8E-107 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF52777 27 199 1.89E-34 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.30.559.10 28 210 2.2E-34 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF47336 4262 4334 3.4E-15 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.30.559.10 1102 1476 4.5E-152 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF52777 3469 3731 2.78E-65 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4877 5282 2.1E-133 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3767 4184 1.1E-144 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2688 3102 2.6E-135 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1588 1995 5.9E-138 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 516 930 2.4E-137 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:1.10.1200.10 2080 2154 2.2E-21 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.30.300.30 1965 2075 3.9E-35 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF56801 4815 5386 7.85E-161 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3219 3234 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF56801 1528 2095 2.35E-165 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF56801 2627 3208 1.01E-160 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF47336 3187 3260 3.01E-19 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.30.559.30 3465 3709 2.5E-157 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 ProSitePatterns PS00012 Phosphopantetheine attachment site. 5397 5412 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.30.559.10 3281 3655 2.5E-157 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.40.50.12780 1557 1963 5.0E-143 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.40.50.12780 4846 5250 6.2E-144 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.40.50.12780 485 898 2.4E-144 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.40.50.12780 2657 3070 4.5E-146 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF13193 AMP-binding enzyme C-terminal domain 3086 3168 5.2E-7 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF13193 AMP-binding enzyme C-terminal domain 4168 4243 2.2E-12 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF13193 AMP-binding enzyme C-terminal domain 914 989 7.9E-14 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF13193 AMP-binding enzyme C-terminal domain 5266 5346 8.8E-11 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF13193 AMP-binding enzyme C-terminal domain 1979 2055 3.3E-10 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF47336 1008 1081 2.09E-17 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF52777 1096 1302 3.34E-47 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.30.300.30 3072 3183 1.1E-31 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.30.300.30 4155 4259 1.1E-36 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF52777 2195 2390 8.34E-31 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF47336 2076 2147 1.44E-15 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 ProSitePatterns PS00455 Putative AMP-binding domain signature. 5000 5011 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF56801 3708 4283 2.75E-172 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.40.50.12780 3731 4154 4.0E-152 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2819 2830 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.30.559.30 211 481 4.2E-36 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.30.559.30 2382 2653 6.6E-47 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.30.559.30 4578 4832 5.0E-83 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.30.559.30 1286 1531 4.5E-152 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:3.30.559.10 2192 2381 7.2E-35 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF52777 4382 4592 1.89E-28 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF52777 2380 2654 7.89E-42 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:1.10.1200.10 5364 5444 1.6E-22 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:1.10.1200.10 3184 3265 6.3E-26 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Gene3D G3DSA:1.10.1200.10 4260 4341 2.0E-21 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF00550 Phosphopantetheine attachment site 1019 1081 1.8E-9 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF00550 Phosphopantetheine attachment site 3198 3260 6.7E-12 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF00550 Phosphopantetheine attachment site 5376 5436 7.1E-12 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF00550 Phosphopantetheine attachment site 4273 4334 2.1E-7 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 Pfam PF00550 Phosphopantetheine attachment site 2085 2146 5.1E-9 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1717 1728 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 ProSitePatterns PS00455 Putative AMP-binding domain signature. 648 659 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1040 1055 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF52777 4580 4842 1.89E-46 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF52777 204 481 2.56E-31 T 01-11-2018 D3790_07875 5b40772d2f20bf1bd0f352d70b267201 5480 SUPERFAMILY SSF52777 1290 1553 7.23E-63 T 01-11-2018 D3790_15065 0b3222205fd207ba4cccadf3ef925aaf 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 5.0E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_15065 0b3222205fd207ba4cccadf3ef925aaf 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 410 5.0E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_15065 0b3222205fd207ba4cccadf3ef925aaf 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 5.0E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_15065 0b3222205fd207ba4cccadf3ef925aaf 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 454 5.0E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_15065 0b3222205fd207ba4cccadf3ef925aaf 460 Pfam PF00672 HAMP domain 186 236 8.5E-7 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D3790_15065 0b3222205fd207ba4cccadf3ef925aaf 460 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 81 149 3.0E-9 T 01-11-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain D3790_15065 0b3222205fd207ba4cccadf3ef925aaf 460 Gene3D G3DSA:3.30.565.10 305 457 7.5E-40 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_15065 0b3222205fd207ba4cccadf3ef925aaf 460 SMART SM00388 240 302 1.2E-15 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_15065 0b3222205fd207ba4cccadf3ef925aaf 460 SUPERFAMILY SSF55874 291 455 1.05E-36 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_15065 0b3222205fd207ba4cccadf3ef925aaf 460 SMART SM00304 186 239 5.9E-9 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D3790_15065 0b3222205fd207ba4cccadf3ef925aaf 460 SMART SM00387 347 457 2.1E-30 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_15065 0b3222205fd207ba4cccadf3ef925aaf 460 Gene3D G3DSA:3.30.450.210 27 149 1.7E-11 T 01-11-2018 IPR038515 CpxA, periplasmic domain superfamily D3790_15065 0b3222205fd207ba4cccadf3ef925aaf 460 SUPERFAMILY SSF47384 226 301 4.32E-16 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D3790_15065 0b3222205fd207ba4cccadf3ef925aaf 460 Gene3D G3DSA:1.10.287.130 190 304 2.4E-38 T 01-11-2018 D3790_15065 0b3222205fd207ba4cccadf3ef925aaf 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 241 300 1.1E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_15065 0b3222205fd207ba4cccadf3ef925aaf 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 455 2.7E-20 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 SUPERFAMILY SSF52172 830 947 1.11E-35 T 01-11-2018 IPR011006 CheY-like superfamily D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 SUPERFAMILY SSF47384 456 537 4.51E-21 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 Gene3D G3DSA:3.40.50.10970 709 816 4.2E-5 T 01-11-2018 IPR038388 RcsC, C-terminal domain superfamily D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 Gene3D G3DSA:3.30.565.10 537 694 3.1E-41 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 SMART SM00387 583 694 7.1E-34 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 SUPERFAMILY SSF55874 525 694 1.83E-41 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 Gene3D G3DSA:1.10.287.130 448 534 1.3E-24 T 01-11-2018 D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 711 800 2.1E-30 T 01-11-2018 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 SMART SM00448 831 942 2.0E-32 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 Pfam PF00512 His Kinase A (phospho-acceptor) domain 472 535 1.1E-17 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 SMART SM00388 471 536 3.6E-20 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 SUPERFAMILY SSF52172 706 805 3.15E-23 T 01-11-2018 IPR011006 CheY-like superfamily D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 1.7E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 647 1.7E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 633 1.7E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 1.7E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 583 692 3.9E-24 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 Gene3D G3DSA:3.40.50.2300 817 947 1.8E-35 T 01-11-2018 D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 Pfam PF00072 Response regulator receiver domain 833 940 1.1E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_04590 eb00666f15d01bd002da880a5f8592bd 953 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 24 947 25.332 T 01-11-2018 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021 D3790_10725 6350fdedf88bf99aecaf2191b40428f4 410 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 296 309 - T 01-11-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 D3790_10725 6350fdedf88bf99aecaf2191b40428f4 410 Pfam PF01494 FAD binding domain 4 344 1.9E-30 T 01-11-2018 IPR002938 FAD-binding domain GO:0071949 D3790_10725 6350fdedf88bf99aecaf2191b40428f4 410 Gene3D G3DSA:3.50.50.60 1 258 4.0E-81 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_10725 6350fdedf88bf99aecaf2191b40428f4 410 Gene3D G3DSA:3.50.50.60 259 409 3.1E-48 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_10725 6350fdedf88bf99aecaf2191b40428f4 410 SUPERFAMILY SSF51905 4 386 9.72E-62 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_10725 6350fdedf88bf99aecaf2191b40428f4 410 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 392 2.1E-133 T 01-11-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 D3790_10725 6350fdedf88bf99aecaf2191b40428f4 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 9.5E-19 T 01-11-2018 D3790_10725 6350fdedf88bf99aecaf2191b40428f4 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 9.5E-19 T 01-11-2018 D3790_10725 6350fdedf88bf99aecaf2191b40428f4 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 9.5E-19 T 01-11-2018 D3790_10725 6350fdedf88bf99aecaf2191b40428f4 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 9.5E-19 T 01-11-2018 D3790_09525 d4cf2760f12f2ce6e3a333f3f34572b4 834 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 301 311 - T 01-11-2018 IPR018030 Fimbrial membrane usher, conserved site D3790_09525 d4cf2760f12f2ce6e3a333f3f34572b4 834 Gene3D G3DSA:2.60.40.2070 741 834 2.2E-22 T 01-11-2018 D3790_09525 d4cf2760f12f2ce6e3a333f3f34572b4 834 Pfam PF13954 PapC N-terminal domain 30 173 2.9E-35 T 01-11-2018 IPR025885 PapC, N-terminal domain GO:0005515 D3790_09525 d4cf2760f12f2ce6e3a333f3f34572b4 834 Gene3D G3DSA:2.60.40.2610 650 740 9.6E-32 T 01-11-2018 D3790_09525 d4cf2760f12f2ce6e3a333f3f34572b4 834 Gene3D G3DSA:2.60.40.3110 259 348 7.5E-38 T 01-11-2018 D3790_09525 d4cf2760f12f2ce6e3a333f3f34572b4 834 Pfam PF13953 PapC C-terminal domain 744 821 4.7E-21 T 01-11-2018 IPR025949 PapC-like, C-terminal domain D3790_09525 d4cf2760f12f2ce6e3a333f3f34572b4 834 Gene3D G3DSA:3.10.20.410 47 162 3.8E-28 T 01-11-2018 D3790_09525 d4cf2760f12f2ce6e3a333f3f34572b4 834 Pfam PF00577 Outer membrane usher protein 189 735 1.1E-189 T 01-11-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 D3790_09525 d4cf2760f12f2ce6e3a333f3f34572b4 834 SUPERFAMILY SSF141729 56 165 3.66E-24 T 01-11-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 D3790_04225 804c335de50802995ea71f46b617623a 221 SMART SM00448 1 112 6.8E-38 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_04225 804c335de50802995ea71f46b617623a 221 SUPERFAMILY SSF46894 120 218 5.39E-18 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D3790_04225 804c335de50802995ea71f46b617623a 221 SUPERFAMILY SSF52172 1 127 3.13E-37 T 01-11-2018 IPR011006 CheY-like superfamily D3790_04225 804c335de50802995ea71f46b617623a 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 217 6.4E-17 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D3790_04225 804c335de50802995ea71f46b617623a 221 Pfam PF00072 Response regulator receiver domain 4 113 1.7E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_04225 804c335de50802995ea71f46b617623a 221 SMART SM00862 144 217 8.6E-17 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D3790_04225 804c335de50802995ea71f46b617623a 221 Gene3D G3DSA:1.10.10.10 124 220 4.5E-18 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_04225 804c335de50802995ea71f46b617623a 221 Gene3D G3DSA:3.40.50.2300 1 121 3.3E-39 T 01-11-2018 D3790_08340 81b4cffa8c9364868687d4972655fb9d 255 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 6 253 41.206 T 01-11-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 D3790_08340 81b4cffa8c9364868687d4972655fb9d 255 SMART SM00382 27 231 6.0E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_08340 81b4cffa8c9364868687d4972655fb9d 255 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_08340 81b4cffa8c9364868687d4972655fb9d 255 Pfam PF00005 ABC transporter 20 167 8.9E-19 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_08340 81b4cffa8c9364868687d4972655fb9d 255 Gene3D G3DSA:3.40.50.300 8 253 1.8E-52 T 01-11-2018 D3790_08340 81b4cffa8c9364868687d4972655fb9d 255 SUPERFAMILY SSF52540 19 229 5.33E-43 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09890 a3554cc53401fefce390f532c99a509d 1019 Gene3D G3DSA:3.30.300.30 421 528 6.2E-21 T 01-11-2018 D3790_09890 a3554cc53401fefce390f532c99a509d 1019 SUPERFAMILY SSF51735 644 912 1.76E-38 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_09890 a3554cc53401fefce390f532c99a509d 1019 SUPERFAMILY SSF47336 535 603 5.23E-14 T 01-11-2018 IPR036736 ACP-like superfamily D3790_09890 a3554cc53401fefce390f532c99a509d 1019 Gene3D G3DSA:3.40.50.12780 17 420 4.8E-108 T 01-11-2018 D3790_09890 a3554cc53401fefce390f532c99a509d 1019 Pfam PF00550 Phosphopantetheine attachment site 541 601 1.4E-12 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_09890 a3554cc53401fefce390f532c99a509d 1019 Pfam PF07993 Male sterility protein 647 889 1.9E-60 T 01-11-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 D3790_09890 a3554cc53401fefce390f532c99a509d 1019 SUPERFAMILY SSF56801 24 550 2.49E-120 T 01-11-2018 D3790_09890 a3554cc53401fefce390f532c99a509d 1019 Gene3D G3DSA:1.10.1200.10 529 611 4.2E-17 T 01-11-2018 IPR036736 ACP-like superfamily D3790_09890 a3554cc53401fefce390f532c99a509d 1019 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 645 1018 6.9E-94 T 01-11-2018 IPR010080 Thioester reductase-like domain D3790_09890 a3554cc53401fefce390f532c99a509d 1019 Pfam PF13193 AMP-binding enzyme C-terminal domain 434 508 2.2E-5 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_09890 a3554cc53401fefce390f532c99a509d 1019 Gene3D G3DSA:3.40.50.720 617 1019 2.6E-102 T 01-11-2018 D3790_09890 a3554cc53401fefce390f532c99a509d 1019 ProSitePatterns PS00455 Putative AMP-binding domain signature. 168 179 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_09890 a3554cc53401fefce390f532c99a509d 1019 Pfam PF00501 AMP-binding enzyme 30 426 2.1E-74 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_09890 a3554cc53401fefce390f532c99a509d 1019 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 51 450 3.7E-105 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_06035 27b6cf35c149222777ef17e91008327c 406 Gene3D G3DSA:1.25.40.590 18 176 2.2E-58 T 01-11-2018 IPR038522 Type IV / VI secretion system, DotU superfamily D3790_06035 27b6cf35c149222777ef17e91008327c 406 Gene3D G3DSA:3.30.1330.60 252 400 4.9E-38 T 01-11-2018 IPR036737 OmpA-like domain superfamily D3790_06035 27b6cf35c149222777ef17e91008327c 406 Pfam PF00691 OmpA family 292 391 3.2E-15 T 01-11-2018 IPR006665 OmpA-like domain D3790_06035 27b6cf35c149222777ef17e91008327c 406 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 20 227 4.5E-70 T 01-11-2018 IPR017732 Type IV / VI secretion system, DotU D3790_06035 27b6cf35c149222777ef17e91008327c 406 SUPERFAMILY SSF103088 281 397 3.53E-26 T 01-11-2018 IPR036737 OmpA-like domain superfamily D3790_06035 27b6cf35c149222777ef17e91008327c 406 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 259 396 8.9E-46 T 01-11-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain D3790_06035 27b6cf35c149222777ef17e91008327c 406 Pfam PF09850 Type VI secretion system protein DotU 21 221 1.0E-70 T 01-11-2018 IPR017732 Type IV / VI secretion system, DotU D3790_06640 c8c995fedc98d01374d9402aac9563bb 207 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 169 26.132 T 01-11-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 D3790_06640 c8c995fedc98d01374d9402aac9563bb 207 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 187 7.8E-86 T 01-11-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 D3790_06640 c8c995fedc98d01374d9402aac9563bb 207 Pfam PF14697 4Fe-4S dicluster domain 110 164 6.2E-18 T 01-11-2018 D3790_06640 c8c995fedc98d01374d9402aac9563bb 207 Gene3D G3DSA:1.10.15.40 38 85 6.5E-7 T 01-11-2018 D3790_06640 c8c995fedc98d01374d9402aac9563bb 207 SUPERFAMILY SSF54862 37 176 5.12E-31 T 01-11-2018 D3790_06640 c8c995fedc98d01374d9402aac9563bb 207 Pfam PF04060 Putative Fe-S cluster 44 76 9.0E-12 T 01-11-2018 IPR007202 4Fe-4S domain GO:0051536 D3790_06640 c8c995fedc98d01374d9402aac9563bb 207 PIRSF PIRSF005784 3 191 5.3E-85 T 01-11-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 D3790_06640 c8c995fedc98d01374d9402aac9563bb 207 Gene3D G3DSA:3.30.70.20 86 183 3.9E-22 T 01-11-2018 D3790_06640 c8c995fedc98d01374d9402aac9563bb 207 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3790_16325 1b055d1824acc196432117b47f472dad 143 Pfam PF00582 Universal stress protein family 3 138 1.4E-21 T 01-11-2018 IPR006016 UspA D3790_16325 1b055d1824acc196432117b47f472dad 143 PIRSF PIRSF006276 1 141 4.1E-54 T 01-11-2018 IPR006015 Universal stress protein A D3790_16325 1b055d1824acc196432117b47f472dad 143 SUPERFAMILY SSF52402 3 139 3.01E-33 T 01-11-2018 D3790_16325 1b055d1824acc196432117b47f472dad 143 Gene3D G3DSA:3.40.50.620 2 142 5.0E-52 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_09250 1f93248005070f1d1f0018f409d273b0 313 PRINTS PR00207 Flagellin signature 76 95 1.9E-32 T 01-11-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 D3790_09250 1f93248005070f1d1f0018f409d273b0 313 PRINTS PR00207 Flagellin signature 111 134 1.9E-32 T 01-11-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 D3790_09250 1f93248005070f1d1f0018f409d273b0 313 PRINTS PR00207 Flagellin signature 37 54 1.9E-32 T 01-11-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 D3790_09250 1f93248005070f1d1f0018f409d273b0 313 Gene3D G3DSA:1.10.8.410 266 313 6.0E-24 T 01-11-2018 D3790_09250 1f93248005070f1d1f0018f409d273b0 313 Pfam PF00700 Bacterial flagellin C-terminal helical region 227 312 7.1E-32 T 01-11-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 D3790_09250 1f93248005070f1d1f0018f409d273b0 313 SUPERFAMILY SSF64518 1 313 5.75E-99 T 01-11-2018 D3790_09250 1f93248005070f1d1f0018f409d273b0 313 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 6.7E-42 T 01-11-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 D3790_09440 72ebbf2fd340fb90f4397ea5eb550d02 384 PIRSF PIRSF005572 8 382 6.3E-105 T 01-11-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 D3790_09440 72ebbf2fd340fb90f4397ea5eb550d02 384 Gene3D G3DSA:3.90.1150.10 11 376 4.6E-122 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_09440 72ebbf2fd340fb90f4397ea5eb550d02 384 Gene3D G3DSA:3.40.640.10 22 264 4.6E-122 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_09440 72ebbf2fd340fb90f4397ea5eb550d02 384 Pfam PF00266 Aminotransferase class-V 11 354 5.4E-72 T 01-11-2018 IPR000192 Aminotransferase class V domain D3790_09440 72ebbf2fd340fb90f4397ea5eb550d02 384 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 200 219 - T 01-11-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site D3790_09440 72ebbf2fd340fb90f4397ea5eb550d02 384 SUPERFAMILY SSF53383 6 376 1.16E-87 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_19125 79dceb7dedd49884b1650676ece5c4f6 264 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 116 123 - T 01-11-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 D3790_19125 79dceb7dedd49884b1650676ece5c4f6 264 SUPERFAMILY SSF53448 17 256 1.67E-58 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_19125 79dceb7dedd49884b1650676ece5c4f6 264 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 16 255 41.016 T 01-11-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 D3790_19125 79dceb7dedd49884b1650676ece5c4f6 264 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 19 255 1.4E-66 T 01-11-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 D3790_19125 79dceb7dedd49884b1650676ece5c4f6 264 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 17 256 3.1E-72 T 01-11-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 D3790_19125 79dceb7dedd49884b1650676ece5c4f6 264 Gene3D G3DSA:3.90.550.10 13 263 3.8E-70 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_15715 0330756dbd1d290efd1442962854ca48 258 Pfam PF05138 Phenylacetic acid catabolic protein 10 258 1.0E-92 T 01-11-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 D3790_15715 0330756dbd1d290efd1442962854ca48 258 PIRSF PIRSF037834 2 258 9.1E-97 T 01-11-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 D3790_15715 0330756dbd1d290efd1442962854ca48 258 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 21 258 3.8E-94 T 01-11-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 D3790_15715 0330756dbd1d290efd1442962854ca48 258 Gene3D G3DSA:1.20.1260.10 1 258 3.3E-99 T 01-11-2018 IPR012347 Ferritin-like D3790_15715 0330756dbd1d290efd1442962854ca48 258 SUPERFAMILY SSF47240 10 252 1.26E-81 T 01-11-2018 IPR009078 Ferritin-like superfamily D3790_13500 7ce46cac415348be5d7299a0e69fe16f 68 Gene3D G3DSA:3.30.1910.10 1 64 2.0E-24 T 01-11-2018 D3790_13500 7ce46cac415348be5d7299a0e69fe16f 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 4.9E-29 T 01-11-2018 IPR009491 Protein of unknown function DUF1107 D3790_13500 7ce46cac415348be5d7299a0e69fe16f 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 8.0E-28 T 01-11-2018 IPR009491 Protein of unknown function DUF1107 D3790_08255 464d593d4dcaf66c6d5b41ed144fb0dc 272 Gene3D G3DSA:3.40.50.1980 18 139 7.6E-38 T 01-11-2018 D3790_08255 464d593d4dcaf66c6d5b41ed144fb0dc 272 Pfam PF01497 Periplasmic binding protein 22 246 3.3E-31 T 01-11-2018 IPR002491 ABC transporter periplasmic binding domain D3790_08255 464d593d4dcaf66c6d5b41ed144fb0dc 272 Gene3D G3DSA:3.40.50.1980 140 272 8.2E-45 T 01-11-2018 D3790_08255 464d593d4dcaf66c6d5b41ed144fb0dc 272 SUPERFAMILY SSF53807 19 266 5.89E-47 T 01-11-2018 D3790_19400 5a2bb1b2c8bad90c8a81f5714e9e13f3 168 TIGRFAM TIGR00077 lspA: signal peptidase II 3 162 9.0E-56 T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D3790_19400 5a2bb1b2c8bad90c8a81f5714e9e13f3 168 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D3790_19400 5a2bb1b2c8bad90c8a81f5714e9e13f3 168 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 18.0 T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D3790_19400 5a2bb1b2c8bad90c8a81f5714e9e13f3 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 2.7E-19 T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D3790_19400 5a2bb1b2c8bad90c8a81f5714e9e13f3 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 2.7E-19 T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D3790_19400 5a2bb1b2c8bad90c8a81f5714e9e13f3 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 2.7E-19 T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D3790_19400 5a2bb1b2c8bad90c8a81f5714e9e13f3 168 Pfam PF01252 Signal peptidase (SPase) II 16 156 2.6E-39 T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D3790_13705 a4b442bf075a0723987247d98eda9eaa 1114 Gene3D G3DSA:2.30.30.60 938 987 5.4E-11 T 01-11-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily D3790_13705 a4b442bf075a0723987247d98eda9eaa 1114 Gene3D G3DSA:3.30.70.100 991 1083 6.6E-10 T 01-11-2018 D3790_13705 a4b442bf075a0723987247d98eda9eaa 1114 Pfam PF00924 Mechanosensitive ion channel 880 1078 7.9E-51 T 01-11-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 D3790_13705 a4b442bf075a0723987247d98eda9eaa 1114 SUPERFAMILY SSF50182 923 988 4.9E-16 T 01-11-2018 IPR010920 LSM domain superfamily D3790_13705 a4b442bf075a0723987247d98eda9eaa 1114 SUPERFAMILY SSF82689 990 1084 2.75E-15 T 01-11-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 D3790_13705 a4b442bf075a0723987247d98eda9eaa 1114 Pfam PF12795 Mechanosensitive ion channel porin domain 32 260 2.7E-57 T 01-11-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain D3790_13705 a4b442bf075a0723987247d98eda9eaa 1114 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 482 819 2.0E-113 T 01-11-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 D3790_13705 a4b442bf075a0723987247d98eda9eaa 1114 SUPERFAMILY SSF82861 838 921 8.24E-8 T 01-11-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 D3790_13030 bf0d1ee10be67d164df6cfad95fdde64 523 Pfam PF03050 Transposase IS66 family 187 472 2.6E-94 T 01-11-2018 IPR004291 Transposase, IS66 D3790_13030 bf0d1ee10be67d164df6cfad95fdde64 523 Pfam PF13005 zinc-finger binding domain of transposase IS66 128 172 2.6E-14 T 01-11-2018 IPR024474 Zinc-finger binding domain of transposase IS66 D3790_13030 bf0d1ee10be67d164df6cfad95fdde64 523 Pfam PF13007 Transposase C of IS166 homeodomain 46 120 4.2E-11 T 01-11-2018 IPR024463 Transposase TnpC, homeodomain D3790_13030 bf0d1ee10be67d164df6cfad95fdde64 523 Pfam PF13817 IS66 C-terminal element 479 516 5.4E-15 T 01-11-2018 IPR039552 Transposase IS66, C-terminal D3790_11480 a30a31b876e6a59a11111800b57b0d5d 215 SUPERFAMILY SSF52540 1 214 2.36E-44 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_11480 a30a31b876e6a59a11111800b57b0d5d 215 Gene3D G3DSA:3.40.50.300 1 214 1.3E-80 T 01-11-2018 D3790_11480 a30a31b876e6a59a11111800b57b0d5d 215 PRINTS PR00094 Adenylate kinase signature 156 171 1.2E-35 T 01-11-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D3790_11480 a30a31b876e6a59a11111800b57b0d5d 215 PRINTS PR00094 Adenylate kinase signature 4 17 1.2E-35 T 01-11-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D3790_11480 a30a31b876e6a59a11111800b57b0d5d 215 PRINTS PR00094 Adenylate kinase signature 32 46 1.2E-35 T 01-11-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D3790_11480 a30a31b876e6a59a11111800b57b0d5d 215 PRINTS PR00094 Adenylate kinase signature 81 97 1.2E-35 T 01-11-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D3790_11480 a30a31b876e6a59a11111800b57b0d5d 215 PRINTS PR00094 Adenylate kinase signature 173 187 1.2E-35 T 01-11-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D3790_11480 a30a31b876e6a59a11111800b57b0d5d 215 Pfam PF05191 Adenylate kinase, active site lid 123 158 2.1E-15 T 01-11-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 D3790_11480 a30a31b876e6a59a11111800b57b0d5d 215 Hamap MF_00235 Adenylate kinase [adk]. 1 214 51.967 T 01-11-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D3790_11480 a30a31b876e6a59a11111800b57b0d5d 215 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 01-11-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D3790_11480 a30a31b876e6a59a11111800b57b0d5d 215 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 1.8E-75 T 01-11-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 D3790_11480 a30a31b876e6a59a11111800b57b0d5d 215 Pfam PF00406 Adenylate kinase 5 186 1.9E-60 T 01-11-2018 D3790_13235 0500d67dffaf8b34f69379d1d51876fa 772 SUPERFAMILY SSF50692 638 760 1.74E-15 T 01-11-2018 IPR009010 Aspartate decarboxylase-like domain superfamily D3790_13235 0500d67dffaf8b34f69379d1d51876fa 772 Pfam PF01568 Molydopterin dinucleotide binding domain 647 754 3.3E-9 T 01-11-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 D3790_13235 0500d67dffaf8b34f69379d1d51876fa 772 Gene3D G3DSA:3.40.50.740 121 595 8.8E-70 T 01-11-2018 D3790_13235 0500d67dffaf8b34f69379d1d51876fa 772 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 759 3.6E-268 T 01-11-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 D3790_13235 0500d67dffaf8b34f69379d1d51876fa 772 PIRSF PIRSF000144 1 765 0.0 T 01-11-2018 D3790_13235 0500d67dffaf8b34f69379d1d51876fa 772 Gene3D G3DSA:3.40.228.10 185 412 8.8E-70 T 01-11-2018 D3790_13235 0500d67dffaf8b34f69379d1d51876fa 772 Pfam PF00384 Molybdopterin oxidoreductase 109 517 6.1E-22 T 01-11-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_13235 0500d67dffaf8b34f69379d1d51876fa 772 SUPERFAMILY SSF53706 48 632 6.02E-137 T 01-11-2018 D3790_15315 cf3496f06cf2bec8bab4f93650e01ee8 345 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 22 31 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_15315 cf3496f06cf2bec8bab4f93650e01ee8 345 Gene3D G3DSA:3.40.50.620 16 340 1.8E-140 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_15315 cf3496f06cf2bec8bab4f93650e01ee8 345 SUPERFAMILY SSF52374 15 341 8.04E-95 T 01-11-2018 D3790_15315 cf3496f06cf2bec8bab4f93650e01ee8 345 Gene3D G3DSA:1.10.240.10 197 309 1.8E-140 T 01-11-2018 D3790_15315 cf3496f06cf2bec8bab4f93650e01ee8 345 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 13 341 5.8E-114 T 01-11-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 D3790_15315 cf3496f06cf2bec8bab4f93650e01ee8 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 26 42 1.5E-27 T 01-11-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 D3790_15315 cf3496f06cf2bec8bab4f93650e01ee8 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 76 95 1.5E-27 T 01-11-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 D3790_15315 cf3496f06cf2bec8bab4f93650e01ee8 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 206 216 1.5E-27 T 01-11-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 D3790_15315 cf3496f06cf2bec8bab4f93650e01ee8 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 152 173 1.5E-27 T 01-11-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 D3790_15315 cf3496f06cf2bec8bab4f93650e01ee8 345 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 13 342 41.954 T 01-11-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 D3790_15315 cf3496f06cf2bec8bab4f93650e01ee8 345 Pfam PF00579 tRNA synthetases class I (W and Y) 12 296 3.1E-86 T 01-11-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_06945 226bfe8026a8fd7332bbc752b51af898 498 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 481 3.7E-194 T 01-11-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 D3790_06945 226bfe8026a8fd7332bbc752b51af898 498 Gene3D G3DSA:3.40.309.10 248 450 9.8E-153 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D3790_06945 226bfe8026a8fd7332bbc752b51af898 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 D3790_06945 226bfe8026a8fd7332bbc752b51af898 498 SUPERFAMILY SSF53720 2 483 9.03E-142 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D3790_06945 226bfe8026a8fd7332bbc752b51af898 498 Gene3D G3DSA:3.40.605.10 22 458 9.8E-153 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D3790_06945 226bfe8026a8fd7332bbc752b51af898 498 Pfam PF00171 Aldehyde dehydrogenase family 18 477 1.4E-136 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D3790_00980 4bc76c2f94ce633ada376c8b4b79a522 388 Gene3D G3DSA:3.40.50.1260 165 373 6.9E-154 T 01-11-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00980 4bc76c2f94ce633ada376c8b4b79a522 388 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 01-11-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00980 4bc76c2f94ce633ada376c8b4b79a522 388 Pfam PF00162 Phosphoglycerate kinase 6 373 1.8E-138 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00980 4bc76c2f94ce633ada376c8b4b79a522 388 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.186 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00980 4bc76c2f94ce633ada376c8b4b79a522 388 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.8E-83 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00980 4bc76c2f94ce633ada376c8b4b79a522 388 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 1.8E-83 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00980 4bc76c2f94ce633ada376c8b4b79a522 388 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 1.8E-83 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00980 4bc76c2f94ce633ada376c8b4b79a522 388 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.8E-83 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00980 4bc76c2f94ce633ada376c8b4b79a522 388 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.8E-83 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00980 4bc76c2f94ce633ada376c8b4b79a522 388 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.8E-83 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00980 4bc76c2f94ce633ada376c8b4b79a522 388 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.8E-83 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00980 4bc76c2f94ce633ada376c8b4b79a522 388 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 1.8E-83 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00980 4bc76c2f94ce633ada376c8b4b79a522 388 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.8E-83 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00980 4bc76c2f94ce633ada376c8b4b79a522 388 Gene3D G3DSA:3.40.50.1260 10 378 6.9E-154 T 01-11-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00980 4bc76c2f94ce633ada376c8b4b79a522 388 SUPERFAMILY SSF53748 3 383 1.41E-143 T 01-11-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00980 4bc76c2f94ce633ada376c8b4b79a522 388 PIRSF PIRSF000724 1 388 3.6E-133 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_09340 d8f5b480b2be3a2089b642a5297c5b78 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 3.9E-33 T 01-11-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 D3790_09340 d8f5b480b2be3a2089b642a5297c5b78 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.4E-23 T 01-11-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 D3790_09340 d8f5b480b2be3a2089b642a5297c5b78 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.4E-23 T 01-11-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 D3790_09340 d8f5b480b2be3a2089b642a5297c5b78 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.4E-23 T 01-11-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 D3790_09340 d8f5b480b2be3a2089b642a5297c5b78 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.5E-29 T 01-11-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 D3790_09340 d8f5b480b2be3a2089b642a5297c5b78 89 PIRSF PIRSF004669 1 89 8.0E-32 T 01-11-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 D3790_13745 7e62ae9b0339b00ccb196cdd43f9a4e3 608 SUPERFAMILY SSF52540 14 202 2.47E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_13745 7e62ae9b0339b00ccb196cdd43f9a4e3 608 Pfam PF09382 RQC domain 406 517 3.5E-39 T 01-11-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 D3790_13745 7e62ae9b0339b00ccb196cdd43f9a4e3 608 Pfam PF00270 DEAD/DEAH box helicase 28 187 6.0E-20 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D3790_13745 7e62ae9b0339b00ccb196cdd43f9a4e3 608 SMART SM00956 411 514 4.1E-56 T 01-11-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 D3790_13745 7e62ae9b0339b00ccb196cdd43f9a4e3 608 SUPERFAMILY SSF52540 208 455 9.74E-65 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_13745 7e62ae9b0339b00ccb196cdd43f9a4e3 608 SUPERFAMILY SSF47819 531 605 6.73E-26 T 01-11-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 D3790_13745 7e62ae9b0339b00ccb196cdd43f9a4e3 608 Pfam PF00570 HRDC domain 534 600 1.6E-22 T 01-11-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 D3790_13745 7e62ae9b0339b00ccb196cdd43f9a4e3 608 SMART SM00490 250 331 2.5E-29 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_13745 7e62ae9b0339b00ccb196cdd43f9a4e3 608 Pfam PF16124 RecQ zinc-binding 343 404 3.0E-16 T 01-11-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain D3790_13745 7e62ae9b0339b00ccb196cdd43f9a4e3 608 Gene3D G3DSA:1.10.150.80 523 606 6.1E-28 T 01-11-2018 D3790_13745 7e62ae9b0339b00ccb196cdd43f9a4e3 608 SMART SM00487 22 218 3.4E-32 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_13745 7e62ae9b0339b00ccb196cdd43f9a4e3 608 Gene3D G3DSA:1.10.10.10 341 522 7.4E-53 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_13745 7e62ae9b0339b00ccb196cdd43f9a4e3 608 Gene3D G3DSA:3.40.50.300 209 340 5.5E-44 T 01-11-2018 D3790_13745 7e62ae9b0339b00ccb196cdd43f9a4e3 608 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 16 464 2.7E-198 T 01-11-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 D3790_13745 7e62ae9b0339b00ccb196cdd43f9a4e3 608 Gene3D G3DSA:3.40.50.300 2 208 1.5E-88 T 01-11-2018 D3790_13745 7e62ae9b0339b00ccb196cdd43f9a4e3 608 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 14 602 9.9E-269 T 01-11-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 D3790_13745 7e62ae9b0339b00ccb196cdd43f9a4e3 608 Pfam PF00271 Helicase conserved C-terminal domain 232 330 8.3E-20 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_13745 7e62ae9b0339b00ccb196cdd43f9a4e3 608 SMART SM00341 530 608 1.3E-19 T 01-11-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 D3790_16610 a706ed436883ec6d7e6898d00591962b 607 Gene3D G3DSA:3.30.70.870 307 591 3.5E-127 T 01-11-2018 D3790_16610 a706ed436883ec6d7e6898d00591962b 607 Gene3D G3DSA:3.30.70.240 390 483 3.5E-127 T 01-11-2018 D3790_16610 a706ed436883ec6d7e6898d00591962b 607 Gene3D G3DSA:2.40.30.10 200 300 1.7E-33 T 01-11-2018 D3790_16610 a706ed436883ec6d7e6898d00591962b 607 SUPERFAMILY SSF52540 3 208 1.21E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16610 a706ed436883ec6d7e6898d00591962b 607 Pfam PF00679 Elongation factor G C-terminus 398 477 1.2E-21 T 01-11-2018 IPR000640 Elongation factor EFG, domain V-like D3790_16610 a706ed436883ec6d7e6898d00591962b 607 SUPERFAMILY SSF54980 303 388 6.12E-15 T 01-11-2018 IPR035647 EF-G domain III/V-like D3790_16610 a706ed436883ec6d7e6898d00591962b 607 PRINTS PR00315 GTP-binding elongation factor signature 72 82 3.1E-13 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_16610 a706ed436883ec6d7e6898d00591962b 607 PRINTS PR00315 GTP-binding elongation factor signature 8 21 3.1E-13 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_16610 a706ed436883ec6d7e6898d00591962b 607 PRINTS PR00315 GTP-binding elongation factor signature 124 133 3.1E-13 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_16610 a706ed436883ec6d7e6898d00591962b 607 PRINTS PR00315 GTP-binding elongation factor signature 52 60 3.1E-13 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_16610 a706ed436883ec6d7e6898d00591962b 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site D3790_16610 a706ed436883ec6d7e6898d00591962b 607 SUPERFAMILY SSF50447 152 300 5.3E-31 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily D3790_16610 a706ed436883ec6d7e6898d00591962b 607 Gene3D G3DSA:3.40.50.300 2 199 2.2E-68 T 01-11-2018 D3790_16610 a706ed436883ec6d7e6898d00591962b 607 Gene3D G3DSA:2.40.50.250 484 600 3.5E-127 T 01-11-2018 D3790_16610 a706ed436883ec6d7e6898d00591962b 607 Pfam PF00009 Elongation factor Tu GTP binding domain 5 196 5.6E-56 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_16610 a706ed436883ec6d7e6898d00591962b 607 SUPERFAMILY SSF54980 399 512 1.77E-26 T 01-11-2018 IPR035647 EF-G domain III/V-like D3790_16610 a706ed436883ec6d7e6898d00591962b 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 600 2.8E-287 T 01-11-2018 IPR006298 GTP-binding protein TypA GO:0005525 D3790_16610 a706ed436883ec6d7e6898d00591962b 607 Pfam PF03144 Elongation factor Tu domain 2 220 290 1.7E-10 T 01-11-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 D3790_16610 a706ed436883ec6d7e6898d00591962b 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 135 2.3E-25 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D3790_13970 0edb11459ade5c8f713c6f3e851018bb 295 Gene3D G3DSA:3.40.190.10 82 178 1.8E-17 T 01-11-2018 D3790_13970 0edb11459ade5c8f713c6f3e851018bb 295 SUPERFAMILY SSF53850 89 294 8.27E-31 T 01-11-2018 D3790_13970 0edb11459ade5c8f713c6f3e851018bb 295 Gene3D G3DSA:1.10.10.10 1 81 3.3E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_13970 0edb11459ade5c8f713c6f3e851018bb 295 Pfam PF03466 LysR substrate binding domain 87 293 5.3E-35 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_13970 0edb11459ade5c8f713c6f3e851018bb 295 Gene3D G3DSA:3.40.190.10 185 261 2.3E-9 T 01-11-2018 D3790_13970 0edb11459ade5c8f713c6f3e851018bb 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.3E-20 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_13970 0edb11459ade5c8f713c6f3e851018bb 295 SUPERFAMILY SSF46785 1 111 1.58E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_12140 e09cbb08b4b086f711845f8ae7627e28 301 Pfam PF12833 Helix-turn-helix domain 217 295 2.1E-18 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D3790_12140 e09cbb08b4b086f711845f8ae7627e28 301 SUPERFAMILY SSF46689 249 297 2.06E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_12140 e09cbb08b4b086f711845f8ae7627e28 301 Gene3D G3DSA:2.60.120.10 37 113 2.2E-8 T 01-11-2018 IPR014710 RmlC-like jelly roll fold D3790_12140 e09cbb08b4b086f711845f8ae7627e28 301 SMART SM00342 211 294 7.6E-23 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D3790_12140 e09cbb08b4b086f711845f8ae7627e28 301 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 248 290 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 D3790_12140 e09cbb08b4b086f711845f8ae7627e28 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 278 294 2.1E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D3790_12140 e09cbb08b4b086f711845f8ae7627e28 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 263 278 2.1E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D3790_12140 e09cbb08b4b086f711845f8ae7627e28 301 Gene3D G3DSA:1.10.10.60 193 300 8.0E-24 T 01-11-2018 D3790_12140 e09cbb08b4b086f711845f8ae7627e28 301 Pfam PF07883 Cupin domain 43 104 2.7E-7 T 01-11-2018 IPR013096 Cupin 2, conserved barrel D3790_12140 e09cbb08b4b086f711845f8ae7627e28 301 SUPERFAMILY SSF51182 41 128 6.45E-11 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily D3790_12140 e09cbb08b4b086f711845f8ae7627e28 301 TIGRFAM TIGR02297 HpaA: 4-hydroxyphenylacetate catabolism regulatory protein HpaA 11 295 2.8E-113 T 01-11-2018 IPR011983 4-hydroxyphenylacetate catabolism regulatory protein HpaA D3790_17745 29a5aef0330367714fa27015aedd54ef 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 619 635 1.4E-11 T 01-11-2018 D3790_17745 29a5aef0330367714fa27015aedd54ef 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 1.4E-11 T 01-11-2018 D3790_17745 29a5aef0330367714fa27015aedd54ef 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 498 516 1.4E-11 T 01-11-2018 D3790_17745 29a5aef0330367714fa27015aedd54ef 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 620 634 5.5E-5 T 01-11-2018 D3790_17745 29a5aef0330367714fa27015aedd54ef 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 399 5.5E-5 T 01-11-2018 D3790_17745 29a5aef0330367714fa27015aedd54ef 673 SUPERFAMILY SSF51395 3 363 9.53E-112 T 01-11-2018 D3790_17745 29a5aef0330367714fa27015aedd54ef 673 Gene3D G3DSA:3.50.50.60 470 626 2.7E-121 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_17745 29a5aef0330367714fa27015aedd54ef 673 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 1.4E-90 T 01-11-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 D3790_17745 29a5aef0330367714fa27015aedd54ef 673 SUPERFAMILY SSF51905 461 651 4.54E-24 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_17745 29a5aef0330367714fa27015aedd54ef 673 SUPERFAMILY SSF51971 334 522 8.0E-43 T 01-11-2018 D3790_17745 29a5aef0330367714fa27015aedd54ef 673 Gene3D G3DSA:3.40.50.720 376 667 2.7E-121 T 01-11-2018 D3790_17745 29a5aef0330367714fa27015aedd54ef 673 Gene3D G3DSA:3.20.20.70 3 369 2.2E-125 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_17745 29a5aef0330367714fa27015aedd54ef 673 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 651 7.2E-27 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 SUPERFAMILY SSF81665 6 669 4.18E-13 T 01-11-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 469 479 3.8E-24 T 01-11-2018 D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 3.8E-24 T 01-11-2018 D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 522 541 3.8E-24 T 01-11-2018 D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 557 3.8E-24 T 01-11-2018 D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.8E-24 T 01-11-2018 D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 SUPERFAMILY SSF81660 322 456 2.19E-33 T 01-11-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 SUPERFAMILY SSF56784 299 565 1.62E-38 T 01-11-2018 IPR036412 HAD-like superfamily D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 686 40.018 T 01-11-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 313 319 - T 01-11-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 3 682 0.0 T 01-11-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 536 1.2E-34 T 01-11-2018 D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 Gene3D G3DSA:1.20.1110.10 567 614 9.7E-25 T 01-11-2018 D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 Gene3D G3DSA:2.70.150.20 106 212 7.6E-25 T 01-11-2018 D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 Gene3D G3DSA:3.40.50.1000 498 566 9.7E-25 T 01-11-2018 IPR023214 HAD superfamily D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 Gene3D G3DSA:3.40.1110.10 322 457 2.0E-52 T 01-11-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 SUPERFAMILY SSF81653 120 207 2.35E-20 T 01-11-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 378 608 1.6E-46 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 347 8.8E-34 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 D3790_03610 59064ce3e5d962fae7c5623e5054e1ef 688 Pfam PF00122 E1-E2 ATPase 117 289 2.4E-32 T 01-11-2018 D3790_18160 bb934377d7a5c0308b81472a55a45292 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 1.6E-15 T 01-11-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 D3790_18160 bb934377d7a5c0308b81472a55a45292 748 SUPERFAMILY SSF52009 293 411 4.32E-26 T 01-11-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 D3790_18160 bb934377d7a5c0308b81472a55a45292 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 01-11-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 D3790_18160 bb934377d7a5c0308b81472a55a45292 748 Pfam PF13185 GAF domain 15 154 6.0E-15 T 01-11-2018 IPR003018 GAF domain GO:0005515 D3790_18160 bb934377d7a5c0308b81472a55a45292 748 Gene3D G3DSA:3.30.450.40 1 162 1.2E-42 T 01-11-2018 IPR029016 GAF-like domain superfamily D3790_18160 bb934377d7a5c0308b81472a55a45292 748 SUPERFAMILY SSF55781 4 158 1.4E-29 T 01-11-2018 D3790_18160 bb934377d7a5c0308b81472a55a45292 748 Gene3D G3DSA:3.50.30.10 175 399 4.9E-55 T 01-11-2018 D3790_18160 bb934377d7a5c0308b81472a55a45292 748 SMART SM00065 17 164 7.0E-23 T 01-11-2018 IPR003018 GAF domain GO:0005515 D3790_18160 bb934377d7a5c0308b81472a55a45292 748 Gene3D G3DSA:3.20.20.60 400 740 3.2E-98 T 01-11-2018 D3790_18160 bb934377d7a5c0308b81472a55a45292 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 173 294 2.0E-22 T 01-11-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 D3790_18160 bb934377d7a5c0308b81472a55a45292 748 SUPERFAMILY SSF47831 202 309 2.75E-27 T 01-11-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 D3790_18160 bb934377d7a5c0308b81472a55a45292 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 174 730 7.0E-126 T 01-11-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 D3790_18160 bb934377d7a5c0308b81472a55a45292 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 422 707 1.8E-95 T 01-11-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 D3790_18160 bb934377d7a5c0308b81472a55a45292 748 SUPERFAMILY SSF51621 423 714 7.59E-94 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D3790_18160 bb934377d7a5c0308b81472a55a45292 748 Gene3D G3DSA:1.10.274.10 190 313 4.9E-55 T 01-11-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 D3790_18160 bb934377d7a5c0308b81472a55a45292 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 1.3E-21 T 01-11-2018 D3790_18160 bb934377d7a5c0308b81472a55a45292 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 1.3E-21 T 01-11-2018 D3790_18160 bb934377d7a5c0308b81472a55a45292 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.3E-21 T 01-11-2018 D3790_18160 bb934377d7a5c0308b81472a55a45292 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 1.3E-21 T 01-11-2018 D3790_06980 7c843e973b62d5ba34a67a6b05d1808a 104 PIRSF PIRSF029218 1 99 1.5E-25 T 01-11-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 D3790_06980 7c843e973b62d5ba34a67a6b05d1808a 104 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 93 1.6E-17 T 01-11-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family D3790_06980 7c843e973b62d5ba34a67a6b05d1808a 104 Gene3D G3DSA:3.30.2310.20 2 99 3.9E-22 T 01-11-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D3790_04330 bbd287d4cf40b2f7ed9f4105b4fd2113 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 01-11-2018 IPR020610 Thiolase, active site GO:0016747 D3790_04330 bbd287d4cf40b2f7ed9f4105b4fd2113 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 2.6E-61 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 D3790_04330 bbd287d4cf40b2f7ed9f4105b4fd2113 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 9 436 1.8E-246 T 01-11-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 D3790_04330 bbd287d4cf40b2f7ed9f4105b4fd2113 436 PIRSF PIRSF000429 9 436 4.1E-120 T 01-11-2018 IPR002155 Thiolase GO:0016747 D3790_04330 bbd287d4cf40b2f7ed9f4105b4fd2113 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 68.034 T 01-11-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 D3790_04330 bbd287d4cf40b2f7ed9f4105b4fd2113 436 SUPERFAMILY SSF53901 15 294 2.28E-60 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_04330 bbd287d4cf40b2f7ed9f4105b4fd2113 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 D3790_04330 bbd287d4cf40b2f7ed9f4105b4fd2113 436 Pfam PF02803 Thiolase, C-terminal domain 296 434 1.8E-35 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 D3790_04330 bbd287d4cf40b2f7ed9f4105b4fd2113 436 SUPERFAMILY SSF53901 297 435 9.79E-32 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_04330 bbd287d4cf40b2f7ed9f4105b4fd2113 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 5.9E-131 T 01-11-2018 IPR002155 Thiolase GO:0016747 D3790_04330 bbd287d4cf40b2f7ed9f4105b4fd2113 436 Gene3D G3DSA:3.40.47.10 6 435 4.4E-112 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_04330 bbd287d4cf40b2f7ed9f4105b4fd2113 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 01-11-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 D3790_03865 8f3d45ba70d035cd078c8b81e58ae102 227 Pfam PF13500 AAA domain 4 208 3.9E-37 T 01-11-2018 D3790_03865 8f3d45ba70d035cd078c8b81e58ae102 227 SUPERFAMILY SSF52540 5 210 8.99E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_03865 8f3d45ba70d035cd078c8b81e58ae102 227 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 211 29.241 T 01-11-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 D3790_03865 8f3d45ba70d035cd078c8b81e58ae102 227 Gene3D G3DSA:3.40.50.300 3 225 2.1E-64 T 01-11-2018 D3790_03865 8f3d45ba70d035cd078c8b81e58ae102 227 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 7.2E-58 T 01-11-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 D3790_03865 8f3d45ba70d035cd078c8b81e58ae102 227 PIRSF PIRSF006755 1 226 1.1E-78 T 01-11-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 D3790_05285 d356e0e84eb230fa680e37a7f68adf8d 367 Gene3D G3DSA:3.40.50.620 1 212 5.0E-97 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_05285 d356e0e84eb230fa680e37a7f68adf8d 367 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 362 40.954 T 01-11-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 D3790_05285 d356e0e84eb230fa680e37a7f68adf8d 367 Gene3D G3DSA:2.30.30.280 214 282 1.3E-28 T 01-11-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 D3790_05285 d356e0e84eb230fa680e37a7f68adf8d 367 Gene3D G3DSA:2.40.30.10 283 366 1.4E-31 T 01-11-2018 D3790_05285 d356e0e84eb230fa680e37a7f68adf8d 367 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 361 7.2E-156 T 01-11-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 D3790_05285 d356e0e84eb230fa680e37a7f68adf8d 367 Pfam PF03054 tRNA methyl transferase 7 361 2.1E-143 T 01-11-2018 D3790_05285 d356e0e84eb230fa680e37a7f68adf8d 367 SUPERFAMILY SSF52402 5 296 1.61E-59 T 01-11-2018 D3790_06140 bebb15abf223df8a6e68c9588401d8c5 183 Pfam PF00881 Nitroreductase family 8 161 1.4E-21 T 01-11-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 D3790_06140 bebb15abf223df8a6e68c9588401d8c5 183 SUPERFAMILY SSF55469 1 182 6.28E-39 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 D3790_06140 bebb15abf223df8a6e68c9588401d8c5 183 Gene3D G3DSA:3.40.109.10 1 183 6.4E-41 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 D3790_06140 bebb15abf223df8a6e68c9588401d8c5 183 PIRSF PIRSF000232 1 183 2.6E-64 T 01-11-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like D3790_06145 7e231cbb1c570e23eb96f8b2eda977dd 348 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 312 7.4E-132 T 01-11-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 D3790_06145 7e231cbb1c570e23eb96f8b2eda977dd 348 PIRSF PIRSF036407 1 345 5.6E-115 T 01-11-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 D3790_06145 7e231cbb1c570e23eb96f8b2eda977dd 348 Gene3D G3DSA:3.90.650.10 164 346 2.7E-48 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily D3790_06145 7e231cbb1c570e23eb96f8b2eda977dd 348 Gene3D G3DSA:3.30.1330.10 2 161 2.6E-47 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily D3790_06145 7e231cbb1c570e23eb96f8b2eda977dd 348 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 6.1E-19 T 01-11-2018 IPR016188 PurM-like, N-terminal domain D3790_06145 7e231cbb1c570e23eb96f8b2eda977dd 348 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 336 8.4E-24 T 01-11-2018 IPR010918 PurM-like, C-terminal domain D3790_06145 7e231cbb1c570e23eb96f8b2eda977dd 348 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 44.789 T 01-11-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 D3790_06145 7e231cbb1c570e23eb96f8b2eda977dd 348 SUPERFAMILY SSF56042 164 336 8.37E-47 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily D3790_06145 7e231cbb1c570e23eb96f8b2eda977dd 348 SUPERFAMILY SSF55326 7 158 2.54E-40 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily D3790_04150 ee294332d2be3544e97e0ca63cdf6da8 208 Gene3D G3DSA:3.40.30.10 5 89 3.1E-87 T 01-11-2018 D3790_04150 ee294332d2be3544e97e0ca63cdf6da8 208 Gene3D G3DSA:1.20.1050.10 90 198 3.1E-87 T 01-11-2018 D3790_04150 ee294332d2be3544e97e0ca63cdf6da8 208 SUPERFAMILY SSF52833 1 84 1.44E-21 T 01-11-2018 IPR036249 Thioredoxin-like superfamily D3790_04150 ee294332d2be3544e97e0ca63cdf6da8 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 135 197 3.7E-14 T 01-11-2018 IPR004046 Glutathione S-transferase, C-terminal D3790_04150 ee294332d2be3544e97e0ca63cdf6da8 208 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 81 8.0E-13 T 01-11-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 D3790_04150 ee294332d2be3544e97e0ca63cdf6da8 208 SUPERFAMILY SSF47616 78 206 1.64E-36 T 01-11-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D3790_12355 d3af29d9b4c73e1fe62871ec19e313bb 347 Gene3D G3DSA:2.40.10.350 180 257 1.6E-33 T 01-11-2018 D3790_12355 d3af29d9b4c73e1fe62871ec19e313bb 347 Pfam PF04085 rod shape-determining protein MreC 123 269 4.9E-36 T 01-11-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 D3790_12355 d3af29d9b4c73e1fe62871ec19e313bb 347 Gene3D G3DSA:2.40.10.340 122 266 1.6E-33 T 01-11-2018 D3790_12355 d3af29d9b4c73e1fe62871ec19e313bb 347 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 276 8.0E-106 T 01-11-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 D3790_04105 026f99b6c4bd950bdfadc7b0404216ad 585 Pfam PF00271 Helicase conserved C-terminal domain 241 343 1.5E-11 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_04105 026f99b6c4bd950bdfadc7b0404216ad 585 Gene3D G3DSA:3.40.50.300 188 379 1.7E-31 T 01-11-2018 D3790_04105 026f99b6c4bd950bdfadc7b0404216ad 585 SUPERFAMILY SSF57829 425 466 2.56E-6 T 01-11-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 D3790_04105 026f99b6c4bd950bdfadc7b0404216ad 585 SUPERFAMILY SSF52540 50 359 6.35E-38 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_04105 026f99b6c4bd950bdfadc7b0404216ad 585 Gene3D G3DSA:3.40.50.300 1 167 4.3E-31 T 01-11-2018 D3790_04105 026f99b6c4bd950bdfadc7b0404216ad 585 Pfam PF04851 Type III restriction enzyme, res subunit 3 155 7.7E-27 T 01-11-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 D3790_04105 026f99b6c4bd950bdfadc7b0404216ad 585 SMART SM00487 1 185 1.4E-19 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_04105 026f99b6c4bd950bdfadc7b0404216ad 585 SMART SM00490 263 345 3.6E-8 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_06150 b8656d13e0137534ca332a4460ab21ea 639 Gene3D G3DSA:3.40.50.140 1 156 3.4E-62 T 01-11-2018 D3790_06150 b8656d13e0137534ca332a4460ab21ea 639 SMART SM00437 280 558 2.0E-102 T 01-11-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 D3790_06150 b8656d13e0137534ca332a4460ab21ea 639 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 3.5E-26 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_06150 b8656d13e0137534ca332a4460ab21ea 639 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 3.5E-26 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_06150 b8656d13e0137534ca332a4460ab21ea 639 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 3.5E-26 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_06150 b8656d13e0137534ca332a4460ab21ea 639 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 3.5E-26 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_06150 b8656d13e0137534ca332a4460ab21ea 639 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 3.5E-26 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_06150 b8656d13e0137534ca332a4460ab21ea 639 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 01-11-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 D3790_06150 b8656d13e0137534ca332a4460ab21ea 639 Pfam PF01131 DNA topoisomerase 158 592 9.8E-113 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_06150 b8656d13e0137534ca332a4460ab21ea 639 SMART SM00493 1 124 9.7E-28 T 01-11-2018 IPR006171 TOPRIM domain D3790_06150 b8656d13e0137534ca332a4460ab21ea 639 SUPERFAMILY SSF56712 1 607 9.81E-188 T 01-11-2018 IPR023405 DNA topoisomerase, type IA, core domain D3790_06150 b8656d13e0137534ca332a4460ab21ea 639 Pfam PF01751 Toprim domain 3 135 3.6E-17 T 01-11-2018 IPR006171 TOPRIM domain D3790_06150 b8656d13e0137534ca332a4460ab21ea 639 Gene3D G3DSA:1.10.460.10 162 602 6.8E-177 T 01-11-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 D3790_06150 b8656d13e0137534ca332a4460ab21ea 639 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 632 2.8E-277 T 01-11-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 D3790_06150 b8656d13e0137534ca332a4460ab21ea 639 SMART SM00436 128 223 3.1E-37 T 01-11-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 D3790_06150 b8656d13e0137534ca332a4460ab21ea 639 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 637 65.466 T 01-11-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 D3790_06150 b8656d13e0137534ca332a4460ab21ea 639 Gene3D G3DSA:2.70.20.10 217 488 6.8E-177 T 01-11-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 D3790_06150 b8656d13e0137534ca332a4460ab21ea 639 Gene3D G3DSA:1.10.290.10 289 416 6.8E-177 T 01-11-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 D3790_19410 0e2b9549cf8ebf72353420faca96ab78 314 Pfam PF01687 Riboflavin kinase 184 306 2.1E-39 T 01-11-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 D3790_19410 0e2b9549cf8ebf72353420faca96ab78 314 SMART SM00904 183 307 1.2E-61 T 01-11-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 D3790_19410 0e2b9549cf8ebf72353420faca96ab78 314 Pfam PF06574 FAD synthetase 12 167 1.3E-56 T 01-11-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 D3790_19410 0e2b9549cf8ebf72353420faca96ab78 314 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 8.7E-113 T 01-11-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 D3790_19410 0e2b9549cf8ebf72353420faca96ab78 314 SUPERFAMILY SSF82114 174 307 4.58E-45 T 01-11-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 D3790_19410 0e2b9549cf8ebf72353420faca96ab78 314 PIRSF PIRSF004491 1 313 6.1E-107 T 01-11-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 D3790_19410 0e2b9549cf8ebf72353420faca96ab78 314 SUPERFAMILY SSF52374 15 175 9.57E-36 T 01-11-2018 D3790_19410 0e2b9549cf8ebf72353420faca96ab78 314 Gene3D G3DSA:3.40.50.620 1 185 4.6E-61 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_19410 0e2b9549cf8ebf72353420faca96ab78 314 Gene3D G3DSA:2.40.30.30 186 313 1.0E-40 T 01-11-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 Gene3D G3DSA:3.30.70.1430 38 824 0.0 T 01-11-2018 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 1.9E-110 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.9E-110 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.9E-110 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.9E-110 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.9E-110 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.9E-110 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.9E-110 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.9E-110 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.9E-110 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 SUPERFAMILY SSF82693 673 861 2.07E-26 T 01-11-2018 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 Pfam PF00873 AcrB/AcrD/AcrF family 1 1032 0.0 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 Gene3D G3DSA:1.20.1640.10 516 1029 0.0 T 01-11-2018 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 Gene3D G3DSA:3.30.70.1430 570 674 0.0 T 01-11-2018 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 SUPERFAMILY SSF82693 38 131 2.62E-27 T 01-11-2018 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 Gene3D G3DSA:3.30.70.1440 675 868 0.0 T 01-11-2018 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 SUPERFAMILY SSF82714 725 807 5.1E-20 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 SUPERFAMILY SSF82714 182 272 3.01E-21 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 Gene3D G3DSA:3.30.70.1320 133 330 0.0 T 01-11-2018 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 SUPERFAMILY SSF82693 135 330 1.52E-26 T 01-11-2018 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 Gene3D G3DSA:1.20.1640.10 8 515 0.0 T 01-11-2018 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 SUPERFAMILY SSF82693 566 670 6.28E-31 T 01-11-2018 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 SUPERFAMILY SSF82866 296 497 2.49E-48 T 01-11-2018 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 SUPERFAMILY SSF82866 845 1032 4.19E-43 T 01-11-2018 D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 Gene3D G3DSA:3.30.2090.10 725 816 0.0 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3790_11420 0e21e1d4bdac579e91b6871b28e200d0 1049 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1044 0.0 T 01-11-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 D3790_18050 8afbe4bbc3b865dfadbf8c9ae97fc169 279 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 265 39.128 T 01-11-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 D3790_18050 8afbe4bbc3b865dfadbf8c9ae97fc169 279 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 265 2.0E-20 T 01-11-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 D3790_18050 8afbe4bbc3b865dfadbf8c9ae97fc169 279 SUPERFAMILY SSF56300 16 277 2.85E-59 T 01-11-2018 D3790_18050 8afbe4bbc3b865dfadbf8c9ae97fc169 279 Gene3D G3DSA:3.60.21.10 4 269 8.6E-73 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like D3790_18050 8afbe4bbc3b865dfadbf8c9ae97fc169 279 Pfam PF00149 Calcineurin-like phosphoesterase 16 206 3.5E-19 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 9 63 3.1E-8 T 01-11-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 SUPERFAMILY SSF81665 386 878 1.27E-10 T 01-11-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 352 927 3.6E-179 T 01-11-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 623 629 - T 01-11-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 Pfam PF00702 haloacid dehalogenase-like hydrolase 618 832 9.4E-46 T 01-11-2018 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 ProSitePatterns PS01047 Heavy-metal-associated domain. 205 234 - T 01-11-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 Gene3D G3DSA:3.40.1110.10 632 750 2.8E-90 T 01-11-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 Gene3D G3DSA:3.30.70.100 70 132 1.5E-9 T 01-11-2018 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 SUPERFAMILY SSF56784 619 924 2.19E-60 T 01-11-2018 IPR036412 HAD-like superfamily D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 391 897 1.6E-84 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 Gene3D G3DSA:3.40.50.1000 602 869 2.8E-90 T 01-11-2018 IPR023214 HAD superfamily D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 Pfam PF00403 Heavy-metal-associated domain 205 259 8.8E-16 T 01-11-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 Pfam PF00403 Heavy-metal-associated domain 10 62 4.3E-9 T 01-11-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 Pfam PF00403 Heavy-metal-associated domain 73 128 5.7E-7 T 01-11-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 Gene3D G3DSA:3.30.70.100 201 265 9.5E-21 T 01-11-2018 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 Gene3D G3DSA:3.30.70.100 6 66 3.6E-14 T 01-11-2018 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 SUPERFAMILY SSF55008 3 65 1.57E-13 T 01-11-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 333 927 1.7E-186 T 01-11-2018 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 ProSitePatterns PS01229 Hypothetical cof family signature 2. 818 840 - T 01-11-2018 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 01-11-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 Gene3D G3DSA:2.70.150.20 407 523 3.2E-32 T 01-11-2018 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 SUPERFAMILY SSF55008 71 136 7.2E-10 T 01-11-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 Pfam PF00122 E1-E2 ATPase 420 600 1.1E-48 T 01-11-2018 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 765 775 5.0E-24 T 01-11-2018 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 469 483 5.0E-24 T 01-11-2018 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 621 635 5.0E-24 T 01-11-2018 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 841 853 5.0E-24 T 01-11-2018 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 818 837 5.0E-24 T 01-11-2018 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 743 754 5.0E-24 T 01-11-2018 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 SUPERFAMILY SSF55008 201 266 3.67E-19 T 01-11-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 SUPERFAMILY SSF81653 422 519 6.93E-23 T 01-11-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 PRINTS PR00943 Copper-transporting ATPase signature 409 427 7.0E-6 T 01-11-2018 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 PRINTS PR00943 Copper-transporting ATPase signature 604 619 7.0E-6 T 01-11-2018 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 PRINTS PR00943 Copper-transporting ATPase signature 337 356 7.0E-6 T 01-11-2018 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 PRINTS PR00943 Copper-transporting ATPase signature 795 812 7.0E-6 T 01-11-2018 D3790_11530 72d52e953a93ef2693147e2f6aa8d8eb 934 PRINTS PR00943 Copper-transporting ATPase signature 542 556 7.0E-6 T 01-11-2018 D3790_17355 78ab7b3aeccbc8fdd476c4a5c37c1a03 230 Gene3D G3DSA:3.40.50.1860 106 213 4.2E-76 T 01-11-2018 D3790_17355 78ab7b3aeccbc8fdd476c4a5c37c1a03 230 Gene3D G3DSA:3.40.50.1860 5 219 4.2E-76 T 01-11-2018 D3790_17355 78ab7b3aeccbc8fdd476c4a5c37c1a03 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 221 2.4E-59 T 01-11-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 D3790_17355 78ab7b3aeccbc8fdd476c4a5c37c1a03 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 223 4.0E-56 T 01-11-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 D3790_17355 78ab7b3aeccbc8fdd476c4a5c37c1a03 230 SUPERFAMILY SSF53681 119 225 1.57E-22 T 01-11-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 D3790_17355 78ab7b3aeccbc8fdd476c4a5c37c1a03 230 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 80 88 - T 01-11-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 D3790_17355 78ab7b3aeccbc8fdd476c4a5c37c1a03 230 SUPERFAMILY SSF53681 3 116 2.4E-36 T 01-11-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 D3790_10095 e484cb22a0d81587fa42f985143a0b86 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 149 2.4E-26 T 01-11-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 D3790_10095 e484cb22a0d81587fa42f985143a0b86 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 51.146 T 01-11-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 D3790_10095 e484cb22a0d81587fa42f985143a0b86 355 SUPERFAMILY SSF54211 167 251 4.55E-32 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_10095 e484cb22a0d81587fa42f985143a0b86 355 Gene3D G3DSA:3.30.230.40 255 355 2.1E-35 T 01-11-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 D3790_10095 e484cb22a0d81587fa42f985143a0b86 355 SUPERFAMILY SSF56784 1 155 5.07E-39 T 01-11-2018 IPR036412 HAD-like superfamily D3790_10095 e484cb22a0d81587fa42f985143a0b86 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 6.4E-77 T 01-11-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 D3790_10095 e484cb22a0d81587fa42f985143a0b86 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 37.29 T 01-11-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 D3790_10095 e484cb22a0d81587fa42f985143a0b86 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 01-11-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 D3790_10095 e484cb22a0d81587fa42f985143a0b86 355 SUPERFAMILY SSF54211 252 341 2.02E-31 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_10095 e484cb22a0d81587fa42f985143a0b86 355 Pfam PF13242 HAD-hyrolase-like 103 147 1.6E-6 T 01-11-2018 D3790_10095 e484cb22a0d81587fa42f985143a0b86 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 5.7E-65 T 01-11-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 D3790_10095 e484cb22a0d81587fa42f985143a0b86 355 Gene3D G3DSA:3.40.50.1000 1 163 9.3E-47 T 01-11-2018 IPR023214 HAD superfamily D3790_10095 e484cb22a0d81587fa42f985143a0b86 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 146 1.8E-46 T 01-11-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 D3790_10095 e484cb22a0d81587fa42f985143a0b86 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 01-11-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 D3790_10095 e484cb22a0d81587fa42f985143a0b86 355 Gene3D G3DSA:3.30.230.40 164 254 1.8E-36 T 01-11-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 D3790_08830 f8b3a4c2a8500b9c28fd3c31325105d7 218 Pfam PF04344 Chemotaxis phosphatase, CheZ 17 218 4.9E-74 T 01-11-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 D3790_08830 f8b3a4c2a8500b9c28fd3c31325105d7 218 SUPERFAMILY SSF75708 15 217 6.67E-62 T 01-11-2018 D3790_08830 f8b3a4c2a8500b9c28fd3c31325105d7 218 Gene3D G3DSA:1.10.287.500 36 171 1.2E-48 T 01-11-2018 D3790_08830 f8b3a4c2a8500b9c28fd3c31325105d7 218 PIRSF PIRSF002884 3 218 8.1E-81 T 01-11-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 D3790_08830 f8b3a4c2a8500b9c28fd3c31325105d7 218 Gene3D G3DSA:1.20.5.590 4 35 2.6E-8 T 01-11-2018 D3790_10555 ca25263a1c9df7a3de22f9968f2de239 266 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 9 23 - T 01-11-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D3790_10555 ca25263a1c9df7a3de22f9968f2de239 266 Gene3D G3DSA:3.40.1010.10 2 119 9.2E-43 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 D3790_10555 ca25263a1c9df7a3de22f9968f2de239 266 SUPERFAMILY SSF53790 2 248 1.7E-76 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 D3790_10555 ca25263a1c9df7a3de22f9968f2de239 266 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 5 239 2.3E-96 T 01-11-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D3790_10555 ca25263a1c9df7a3de22f9968f2de239 266 Gene3D G3DSA:3.30.950.10 120 263 8.0E-44 T 01-11-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 D3790_10555 ca25263a1c9df7a3de22f9968f2de239 266 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 84 117 - T 01-11-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D3790_10555 ca25263a1c9df7a3de22f9968f2de239 266 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 216 1.9E-44 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 D3790_19540 8ac25d7a477a0c62b8506677e67b1ed2 325 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 99 316 2.3E-85 T 01-11-2018 D3790_19540 8ac25d7a477a0c62b8506677e67b1ed2 325 Gene3D G3DSA:3.40.50.1000 107 316 4.2E-110 T 01-11-2018 IPR023214 HAD superfamily D3790_19540 8ac25d7a477a0c62b8506677e67b1ed2 325 SUPERFAMILY SSF56784 110 316 3.41E-47 T 01-11-2018 IPR036412 HAD-like superfamily D3790_19540 8ac25d7a477a0c62b8506677e67b1ed2 325 Gene3D G3DSA:1.10.150.210 121 183 4.2E-110 T 01-11-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 D3790_19540 8ac25d7a477a0c62b8506677e67b1ed2 325 Pfam PF12710 haloacid dehalogenase-like hydrolase 146 282 5.3E-15 T 01-11-2018 D3790_19540 8ac25d7a477a0c62b8506677e67b1ed2 325 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 113 283 5.9E-23 T 01-11-2018 D3790_19540 8ac25d7a477a0c62b8506677e67b1ed2 325 Gene3D G3DSA:3.30.70.2020 38 320 4.2E-110 T 01-11-2018 D3790_12145 fa4ee0e2b8ff3978915574c559bcddf5 454 TIGRFAM TIGR02332 HpaX: 4-hydroxyphenylacetate permease 28 435 1.9E-236 T 01-11-2018 IPR012707 4-hydroxyphenylacetate permease GO:1900754|GO:1901241 D3790_12145 fa4ee0e2b8ff3978915574c559bcddf5 454 SUPERFAMILY SSF103473 22 445 2.88E-80 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_12145 fa4ee0e2b8ff3978915574c559bcddf5 454 Pfam PF07690 Major Facilitator Superfamily 40 394 4.2E-44 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_12145 fa4ee0e2b8ff3978915574c559bcddf5 454 Gene3D G3DSA:1.20.1250.20 18 451 5.3E-75 T 01-11-2018 D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 SUPERFAMILY SSF47336 1390 1459 5.5E-16 T 01-11-2018 IPR036736 ACP-like superfamily D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 SMART SM00825 Beta-ketoacyl synthase 7 430 4.8E-154 T 01-11-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 SUPERFAMILY SSF53901 3 425 4.65E-73 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 166 182 - T 01-11-2018 IPR018201 Beta-ketoacyl synthase, active site D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 Gene3D G3DSA:3.30.559.10 1484 1846 5.7E-117 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 524 817 1.8E-52 T 01-11-2018 IPR020801 Polyketide synthase, acyl transferase domain D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 Gene3D G3DSA:1.10.1200.10 1386 1467 4.7E-20 T 01-11-2018 IPR036736 ACP-like superfamily D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 Gene3D G3DSA:3.30.70.250 648 709 1.4E-108 T 01-11-2018 D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 SUPERFAMILY SSF52777 1476 1648 9.45E-37 T 01-11-2018 D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 379 489 3.5E-19 T 01-11-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 Gene3D G3DSA:3.40.366.10 520 818 1.4E-108 T 01-11-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 Gene3D G3DSA:3.30.70.3290 444 847 1.4E-108 T 01-11-2018 D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 Gene3D G3DSA:3.40.50.720 995 1359 1.3E-55 T 01-11-2018 D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 Pfam PF00698 Acyl transferase domain 522 787 1.9E-33 T 01-11-2018 IPR014043 Acyl transferase D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 Pfam PF08659 KR domain 1127 1307 1.5E-30 T 01-11-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1127 1310 4.7E-12 T 01-11-2018 D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 6 253 5.8E-63 T 01-11-2018 IPR014030 Beta-ketoacyl synthase, N-terminal D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 SUPERFAMILY SSF51735 1126 1300 5.53E-21 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 Pfam PF00668 Condensation domain 1479 1911 1.4E-100 T 01-11-2018 IPR001242 Condensation domain D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 Pfam PF00550 Phosphopantetheine attachment site 1400 1460 1.0E-12 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 261 376 3.8E-38 T 01-11-2018 IPR014031 Beta-ketoacyl synthase, C-terminal D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 Gene3D G3DSA:3.40.47.10 2 429 3.2E-146 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 SUPERFAMILY SSF52151 521 801 2.88E-54 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 Gene3D G3DSA:3.30.559.30 1657 1902 5.7E-117 T 01-11-2018 D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1422 1437 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_09385 4f30a0ccb75211723c9a0ef623d79956 1927 SUPERFAMILY SSF52777 1662 1906 1.11E-47 T 01-11-2018 D3790_13825 6d75aab285cc5ac42bd844705d7f423a 313 PIRSF PIRSF001438 1 311 9.4E-124 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D3790_13825 6d75aab285cc5ac42bd844705d7f423a 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 01-11-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D3790_13825 6d75aab285cc5ac42bd844705d7f423a 313 SUPERFAMILY SSF53850 4 219 1.54E-87 T 01-11-2018 D3790_13825 6d75aab285cc5ac42bd844705d7f423a 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 9.1E-21 T 01-11-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D3790_13825 6d75aab285cc5ac42bd844705d7f423a 313 Gene3D G3DSA:3.40.190.10 6 216 5.3E-85 T 01-11-2018 D3790_13825 6d75aab285cc5ac42bd844705d7f423a 313 SUPERFAMILY SSF54782 220 308 8.76E-28 T 01-11-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D3790_13825 6d75aab285cc5ac42bd844705d7f423a 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 1.4E-114 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D3790_13825 6d75aab285cc5ac42bd844705d7f423a 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 3.9E-49 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D3790_13825 6d75aab285cc5ac42bd844705d7f423a 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 3.9E-49 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D3790_13825 6d75aab285cc5ac42bd844705d7f423a 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 3.9E-49 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D3790_13825 6d75aab285cc5ac42bd844705d7f423a 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 3.9E-49 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D3790_13825 6d75aab285cc5ac42bd844705d7f423a 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 3.9E-49 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D3790_13825 6d75aab285cc5ac42bd844705d7f423a 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.498 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D3790_13825 6d75aab285cc5ac42bd844705d7f423a 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 213 1.1E-79 T 01-11-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D3790_13825 6d75aab285cc5ac42bd844705d7f423a 313 Gene3D G3DSA:3.30.160.40 221 306 3.3E-29 T 01-11-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D3790_13825 6d75aab285cc5ac42bd844705d7f423a 313 Gene3D G3DSA:3.40.190.10 100 199 5.3E-85 T 01-11-2018 D3790_14115 c94711b47325617043b97b37628706d3 66 Pfam PF03889 Domain of unknown function 9 45 4.3E-23 T 01-11-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 D3790_09550 56e4cf232f704a409813fd947c194238 419 Gene3D G3DSA:3.30.160.390 1 89 8.1E-18 T 01-11-2018 IPR038488 Integrase, DNA-binding domain superfamily D3790_09550 56e4cf232f704a409813fd947c194238 419 Pfam PF13356 Arm DNA-binding domain 4 88 7.3E-13 T 01-11-2018 IPR025166 Integrase, DNA-binding domain D3790_09550 56e4cf232f704a409813fd947c194238 419 Gene3D G3DSA:1.10.150.130 93 204 6.8E-13 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal D3790_09550 56e4cf232f704a409813fd947c194238 419 SUPERFAMILY SSF56349 98 394 6.77E-43 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_09550 56e4cf232f704a409813fd947c194238 419 Pfam PF00589 Phage integrase family 214 385 4.4E-17 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D3790_09550 56e4cf232f704a409813fd947c194238 419 Gene3D G3DSA:1.10.443.10 213 390 8.5E-21 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_00895 d9d089c3219fe2ea434a7b365cc76f6c 291 Gene3D G3DSA:3.40.50.10860 8 276 9.8E-107 T 01-11-2018 D3790_00895 d9d089c3219fe2ea434a7b365cc76f6c 291 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 1.7E-67 T 01-11-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D3790_00895 d9d089c3219fe2ea434a7b365cc76f6c 291 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 01-11-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D3790_00895 d9d089c3219fe2ea434a7b365cc76f6c 291 Gene3D G3DSA:3.40.50.720 6 259 9.8E-107 T 01-11-2018 D3790_00895 d9d089c3219fe2ea434a7b365cc76f6c 291 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 01-11-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D3790_00895 d9d089c3219fe2ea434a7b365cc76f6c 291 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 6.1E-40 T 01-11-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D3790_00895 d9d089c3219fe2ea434a7b365cc76f6c 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 4.7E-87 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D3790_00895 d9d089c3219fe2ea434a7b365cc76f6c 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 4.7E-87 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D3790_00895 d9d089c3219fe2ea434a7b365cc76f6c 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 4.7E-87 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D3790_00895 d9d089c3219fe2ea434a7b365cc76f6c 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 4.7E-87 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D3790_00895 d9d089c3219fe2ea434a7b365cc76f6c 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 4.7E-87 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D3790_00895 d9d089c3219fe2ea434a7b365cc76f6c 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 4.7E-87 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D3790_00895 d9d089c3219fe2ea434a7b365cc76f6c 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 4.7E-87 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D3790_00895 d9d089c3219fe2ea434a7b365cc76f6c 291 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.87 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D3790_00895 d9d089c3219fe2ea434a7b365cc76f6c 291 SUPERFAMILY SSF51735 123 285 1.65E-51 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_00895 d9d089c3219fe2ea434a7b365cc76f6c 291 SUPERFAMILY SSF53223 1 122 1.44E-40 T 01-11-2018 D3790_17025 3c70202a2fc426c7e96aebd4c95d45ba 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 2.4E-110 T 01-11-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 D3790_17025 3c70202a2fc426c7e96aebd4c95d45ba 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D3790_17025 3c70202a2fc426c7e96aebd4c95d45ba 280 SUPERFAMILY SSF53335 9 279 3.82E-97 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_17025 3c70202a2fc426c7e96aebd4c95d45ba 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.126 T 01-11-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 D3790_17025 3c70202a2fc426c7e96aebd4c95d45ba 280 Gene3D G3DSA:3.40.50.150 1 280 6.3E-118 T 01-11-2018 D3790_12595 96333d049f0a55754b7a3a6c23eaa25c 261 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 189 0.0013 T 01-11-2018 D3790_12595 96333d049f0a55754b7a3a6c23eaa25c 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 236 255 7.5E-42 T 01-11-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 D3790_12595 96333d049f0a55754b7a3a6c23eaa25c 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 210 229 7.5E-42 T 01-11-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 D3790_12595 96333d049f0a55754b7a3a6c23eaa25c 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 171 194 7.5E-42 T 01-11-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 D3790_12595 96333d049f0a55754b7a3a6c23eaa25c 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 106 126 7.5E-42 T 01-11-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 D3790_12595 96333d049f0a55754b7a3a6c23eaa25c 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 13 30 7.5E-42 T 01-11-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 D3790_12595 96333d049f0a55754b7a3a6c23eaa25c 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 86 103 7.5E-42 T 01-11-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 D3790_12595 96333d049f0a55754b7a3a6c23eaa25c 261 Gene3D G3DSA:3.40.50.720 4 258 1.1E-70 T 01-11-2018 D3790_12595 96333d049f0a55754b7a3a6c23eaa25c 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.7E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12595 96333d049f0a55754b7a3a6c23eaa25c 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.7E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12595 96333d049f0a55754b7a3a6c23eaa25c 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.7E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12595 96333d049f0a55754b7a3a6c23eaa25c 261 Pfam PF00106 short chain dehydrogenase 8 201 2.0E-54 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12595 96333d049f0a55754b7a3a6c23eaa25c 261 SUPERFAMILY SSF51735 8 256 4.2E-67 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_12595 96333d049f0a55754b7a3a6c23eaa25c 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D3790_00870 08652346756a8a2bfe4b1798f4033534 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 01-11-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 D3790_00870 08652346756a8a2bfe4b1798f4033534 402 Pfam PF00872 Transposase, Mutator family 9 377 1.8E-113 T 01-11-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 D3790_02970 08652346756a8a2bfe4b1798f4033534 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 01-11-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 D3790_02970 08652346756a8a2bfe4b1798f4033534 402 Pfam PF00872 Transposase, Mutator family 9 377 1.8E-113 T 01-11-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 D3790_04540 08652346756a8a2bfe4b1798f4033534 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 01-11-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 D3790_04540 08652346756a8a2bfe4b1798f4033534 402 Pfam PF00872 Transposase, Mutator family 9 377 1.8E-113 T 01-11-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 D3790_11170 08652346756a8a2bfe4b1798f4033534 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 01-11-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 D3790_11170 08652346756a8a2bfe4b1798f4033534 402 Pfam PF00872 Transposase, Mutator family 9 377 1.8E-113 T 01-11-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 D3790_06580 08652346756a8a2bfe4b1798f4033534 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 01-11-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 D3790_06580 08652346756a8a2bfe4b1798f4033534 402 Pfam PF00872 Transposase, Mutator family 9 377 1.8E-113 T 01-11-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Gene3D G3DSA:3.40.50.12780 2662 3076 5.5E-112 T 01-11-2018 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3214 3229 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 SUPERFAMILY SSF47336 2103 2175 4.97E-16 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 SUPERFAMILY SSF52777 1321 1562 1.67E-58 T 01-11-2018 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Gene3D G3DSA:3.30.300.30 935 1038 3.7E-30 T 01-11-2018 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 SUPERFAMILY SSF56801 2638 3201 1.28E-131 T 01-11-2018 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Gene3D G3DSA:3.30.559.10 2222 2587 2.7E-86 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 SUPERFAMILY SSF56801 1567 2123 1.96E-152 T 01-11-2018 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 SUPERFAMILY SSF47336 1042 1113 3.8E-17 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2135 2150 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 SUPERFAMILY SSF52777 2214 2410 5.56E-33 T 01-11-2018 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1742 1753 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 SUPERFAMILY SSF52777 2396 2640 3.45E-40 T 01-11-2018 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Gene3D G3DSA:1.10.1200.10 1046 1123 1.9E-23 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 SUPERFAMILY SSF56801 502 1061 1.31E-149 T 01-11-2018 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1072 1087 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Gene3D G3DSA:3.30.559.10 79 451 7.7E-142 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Gene3D G3DSA:3.30.559.30 2396 2653 2.7E-86 T 01-11-2018 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Gene3D G3DSA:3.30.559.30 1318 1560 1.1E-138 T 01-11-2018 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2821 2832 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Gene3D G3DSA:3.30.559.30 261 506 7.7E-142 T 01-11-2018 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Gene3D G3DSA:3.30.300.30 1997 2097 1.3E-33 T 01-11-2018 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Gene3D G3DSA:3.30.300.30 3077 3178 7.8E-28 T 01-11-2018 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 SUPERFAMILY SSF52777 80 257 1.78E-44 T 01-11-2018 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2698 3106 1.6E-111 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1620 2027 4.4E-127 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 563 964 5.8E-128 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Gene3D G3DSA:1.10.1200.10 3179 3262 4.1E-24 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 SMART SM00823 Phosphopantetheine attachment site 1048 1117 0.0026 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 SMART SM00823 Phosphopantetheine attachment site 2111 2179 0.044 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 SMART SM00823 Phosphopantetheine attachment site 3187 3259 4.9E-6 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Gene3D G3DSA:3.40.50.12780 532 932 1.2E-133 T 01-11-2018 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 SUPERFAMILY SSF52777 264 505 4.22E-59 T 01-11-2018 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Pfam PF00550 Phosphopantetheine attachment site 2114 2174 5.4E-10 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Pfam PF00550 Phosphopantetheine attachment site 1050 1112 1.0E-11 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Pfam PF00550 Phosphopantetheine attachment site 3191 3255 5.0E-13 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Pfam PF00668 Condensation domain 77 521 1.3E-107 T 01-11-2018 IPR001242 Condensation domain D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Pfam PF00668 Condensation domain 1135 1578 9.6E-106 T 01-11-2018 IPR001242 Condensation domain D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Pfam PF00668 Condensation domain 2217 2655 2.6E-60 T 01-11-2018 IPR001242 Condensation domain D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 SUPERFAMILY SSF52777 1138 1314 1.67E-43 T 01-11-2018 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Pfam PF13193 AMP-binding enzyme C-terminal domain 2011 2084 1.2E-9 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Pfam PF13193 AMP-binding enzyme C-terminal domain 948 1021 3.8E-8 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Gene3D G3DSA:1.10.1200.10 2098 2181 6.0E-21 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 SUPERFAMILY SSF47336 3182 3256 7.85E-19 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Gene3D G3DSA:3.30.559.10 1136 1508 1.1E-138 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Gene3D G3DSA:3.40.50.12780 1592 1995 3.6E-131 T 01-11-2018 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Pfam PF00501 AMP-binding enzyme 2677 3082 7.4E-80 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Pfam PF00501 AMP-binding enzyme 1603 2003 2.2E-94 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 Pfam PF00501 AMP-binding enzyme 545 940 1.3E-101 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_06285 74fafef196f61ed3c77c03d19c449656 3279 ProSitePatterns PS00455 Putative AMP-binding domain signature. 685 696 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_19425 cb3d467e08bd9d197b3cecc2e2aaacf6 389 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 387 23.26 T 01-11-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 D3790_19425 cb3d467e08bd9d197b3cecc2e2aaacf6 389 Pfam PF06965 Na+/H+ antiporter 1 7 380 1.0E-147 T 01-11-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 D3790_19425 cb3d467e08bd9d197b3cecc2e2aaacf6 389 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 380 1.3E-169 T 01-11-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 D3790_19425 cb3d467e08bd9d197b3cecc2e2aaacf6 389 Gene3D G3DSA:1.20.1530.10 3 387 7.8E-152 T 01-11-2018 IPR023171 Na/H antiporter domain superfamily D3790_06615 dafbe7dddf47a21720d9daa875adf17f 210 Gene3D G3DSA:1.10.340.30 21 132 1.6E-77 T 01-11-2018 D3790_06615 dafbe7dddf47a21720d9daa875adf17f 210 Pfam PF00633 Helix-hairpin-helix motif 99 127 1.6E-7 T 01-11-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 D3790_06615 dafbe7dddf47a21720d9daa875adf17f 210 Gene3D G3DSA:1.10.1670.10 11 203 1.6E-77 T 01-11-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 D3790_06615 dafbe7dddf47a21720d9daa875adf17f 210 SUPERFAMILY SSF48150 2 207 2.04E-72 T 01-11-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 D3790_06615 dafbe7dddf47a21720d9daa875adf17f 210 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 01-11-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 D3790_06615 dafbe7dddf47a21720d9daa875adf17f 210 PIRSF PIRSF001435 1 210 1.1E-51 T 01-11-2018 D3790_06615 dafbe7dddf47a21720d9daa875adf17f 210 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.021 T 01-11-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 D3790_06615 dafbe7dddf47a21720d9daa875adf17f 210 SMART SM00525 186 206 9.8E-4 T 01-11-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 D3790_06615 dafbe7dddf47a21720d9daa875adf17f 210 SMART SM00478 38 185 1.7E-52 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 D3790_06615 dafbe7dddf47a21720d9daa875adf17f 210 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 2.5E-19 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 D3790_06615 dafbe7dddf47a21720d9daa875adf17f 210 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 01-11-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 D3790_06615 dafbe7dddf47a21720d9daa875adf17f 210 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 01-11-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 D3790_06615 dafbe7dddf47a21720d9daa875adf17f 210 TIGRFAM TIGR01083 nth: endonuclease III 4 194 4.4E-89 T 01-11-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 D3790_16925 33a0585f97b449b625c54e9aa9a97cba 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 3.6E-72 T 01-11-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 D3790_16925 33a0585f97b449b625c54e9aa9a97cba 289 SUPERFAMILY SSF52540 4 286 1.4E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16925 33a0585f97b449b625c54e9aa9a97cba 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 01-11-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 D3790_16925 33a0585f97b449b625c54e9aa9a97cba 289 Gene3D G3DSA:3.40.50.300 1 289 4.1E-114 T 01-11-2018 D3790_16925 33a0585f97b449b625c54e9aa9a97cba 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 6.4E-29 T 01-11-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 D3790_16925 33a0585f97b449b625c54e9aa9a97cba 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 6.4E-29 T 01-11-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 D3790_16925 33a0585f97b449b625c54e9aa9a97cba 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 6.4E-29 T 01-11-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 D3790_16925 33a0585f97b449b625c54e9aa9a97cba 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 6.4E-29 T 01-11-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 D3790_01225 10ce3fa846812f87d0e603fb4a2587ba 307 SUPERFAMILY SSF160940 3 278 1.28E-121 T 01-11-2018 D3790_01225 10ce3fa846812f87d0e603fb4a2587ba 307 Gene3D G3DSA:1.10.3530.10 30 207 1.1E-100 T 01-11-2018 IPR023136 Api92-like domain superfamily D3790_01225 10ce3fa846812f87d0e603fb4a2587ba 307 Gene3D G3DSA:3.30.70.1270 4 270 1.1E-100 T 01-11-2018 D3790_01225 10ce3fa846812f87d0e603fb4a2587ba 307 Pfam PF06924 Protein of unknown function (DUF1281) 9 140 1.0E-58 T 01-11-2018 IPR009694 Protein of unknown function DUF1281 D3790_13605 e292c68a92c1ec9a11138c9a366d5550 313 SUPERFAMILY SSF52540 13 170 2.87E-20 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_13605 e292c68a92c1ec9a11138c9a366d5550 313 Gene3D G3DSA:1.10.20.140 119 190 1.9E-108 T 01-11-2018 D3790_13605 e292c68a92c1ec9a11138c9a366d5550 313 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 305 30.504 T 01-11-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 D3790_13605 e292c68a92c1ec9a11138c9a366d5550 313 SUPERFAMILY SSF52540 13 239 8.72E-6 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_13605 e292c68a92c1ec9a11138c9a366d5550 313 Gene3D G3DSA:3.40.50.300 16 296 1.9E-108 T 01-11-2018 D3790_13605 e292c68a92c1ec9a11138c9a366d5550 313 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 300 3.2E-120 T 01-11-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 D3790_13605 e292c68a92c1ec9a11138c9a366d5550 313 Pfam PF01715 IPP transferase 46 291 5.8E-90 T 01-11-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 D3790_08945 d01bfd90b61e14de0487194131fc54be 313 PIRSF PIRSF026649 2 306 3.5E-98 T 01-11-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 D3790_08945 d01bfd90b61e14de0487194131fc54be 313 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 52.448 T 01-11-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 D3790_08945 d01bfd90b61e14de0487194131fc54be 313 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 297 7.6E-99 T 01-11-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 D3790_08945 d01bfd90b61e14de0487194131fc54be 313 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 306 4.0E-142 T 01-11-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 D3790_01340 bb77bb49848d019409bb32e110bbc1b2 384 SUPERFAMILY SSF56801 74 337 2.75E-14 T 01-11-2018 D3790_01340 bb77bb49848d019409bb32e110bbc1b2 384 Gene3D G3DSA:3.40.50.12780 57 346 2.5E-11 T 01-11-2018 D3790_01340 bb77bb49848d019409bb32e110bbc1b2 384 Pfam PF00501 AMP-binding enzyme 115 335 9.8E-7 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 Gene3D G3DSA:2.40.50.140 566 675 1.8E-28 T 01-11-2018 D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 Pfam PF01588 Putative tRNA binding domain 579 672 1.8E-20 T 01-11-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 SUPERFAMILY SSF50249 568 674 3.18E-27 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 535 1.2E-199 T 01-11-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 538 675 3.0E-43 T 01-11-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 Gene3D G3DSA:2.20.28.20 142 176 7.6E-163 T 01-11-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 SUPERFAMILY SSF57770 142 176 2.35E-13 T 01-11-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 Gene3D G3DSA:1.10.730.10 389 526 7.8E-33 T 01-11-2018 D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 SUPERFAMILY SSF52374 6 387 6.37E-101 T 01-11-2018 D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 8.4E-26 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 8.4E-26 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 8.4E-26 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 8.4E-26 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 8.4E-26 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 8.4E-26 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 Gene3D G3DSA:3.40.50.620 9 384 7.6E-163 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.217 T 01-11-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 Pfam PF09334 tRNA synthetases class I (M) 9 396 7.4E-165 T 01-11-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_10180 a4dceaadc69754e2d2e26020dfab1a61 675 SUPERFAMILY SSF47323 390 546 4.67E-43 T 01-11-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_18935 8714526241f4a6d1a59b762dc63470b2 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 8 457 1.3E-93 T 01-11-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 D3790_18935 8714526241f4a6d1a59b762dc63470b2 458 Pfam PF02447 GntP family permease 5 457 5.8E-130 T 01-11-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 D3790_18935 8714526241f4a6d1a59b762dc63470b2 458 PIRSF PIRSF002746 1 458 5.1E-138 T 01-11-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 D3790_18395 66f29a5733083fbd5b5909d01f13015f 265 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 42.187 T 01-11-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 D3790_18395 66f29a5733083fbd5b5909d01f13015f 265 Pfam PF00557 Metallopeptidase family M24 13 242 8.8E-52 T 01-11-2018 IPR000994 Peptidase M24 D3790_18395 66f29a5733083fbd5b5909d01f13015f 265 SUPERFAMILY SSF55920 3 258 1.7E-89 T 01-11-2018 IPR036005 Creatinase/aminopeptidase-like D3790_18395 66f29a5733083fbd5b5909d01f13015f 265 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 249 3.0E-105 T 01-11-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 D3790_18395 66f29a5733083fbd5b5909d01f13015f 265 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 01-11-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 D3790_18395 66f29a5733083fbd5b5909d01f13015f 265 Gene3D G3DSA:3.90.230.10 2 260 5.9E-113 T 01-11-2018 D3790_18395 66f29a5733083fbd5b5909d01f13015f 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 7.4E-21 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 D3790_18395 66f29a5733083fbd5b5909d01f13015f 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 7.4E-21 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 D3790_18395 66f29a5733083fbd5b5909d01f13015f 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 7.4E-21 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 D3790_18395 66f29a5733083fbd5b5909d01f13015f 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 7.4E-21 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 D3790_09275 5cd39b907ea7640e44dd1180ff6398e7 245 SUPERFAMILY SSF102198 14 244 1.31E-50 T 01-11-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 D3790_09275 5cd39b907ea7640e44dd1180ff6398e7 245 Gene3D G3DSA:3.50.30.50 3 245 4.3E-62 T 01-11-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 D3790_09275 5cd39b907ea7640e44dd1180ff6398e7 245 Pfam PF04199 Putative cyclase 18 182 4.3E-31 T 01-11-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 D3790_09460 d774e80761d3f184ca94d3c175574552 325 PRINTS PR01002 Flagellar protein FlgJ signature 289 307 2.8E-70 T 01-11-2018 D3790_09460 d774e80761d3f184ca94d3c175574552 325 PRINTS PR01002 Flagellar protein FlgJ signature 183 201 2.8E-70 T 01-11-2018 D3790_09460 d774e80761d3f184ca94d3c175574552 325 PRINTS PR01002 Flagellar protein FlgJ signature 203 224 2.8E-70 T 01-11-2018 D3790_09460 d774e80761d3f184ca94d3c175574552 325 PRINTS PR01002 Flagellar protein FlgJ signature 269 288 2.8E-70 T 01-11-2018 D3790_09460 d774e80761d3f184ca94d3c175574552 325 PRINTS PR01002 Flagellar protein FlgJ signature 5 25 2.8E-70 T 01-11-2018 D3790_09460 d774e80761d3f184ca94d3c175574552 325 PRINTS PR01002 Flagellar protein FlgJ signature 247 268 2.8E-70 T 01-11-2018 D3790_09460 d774e80761d3f184ca94d3c175574552 325 PRINTS PR01002 Flagellar protein FlgJ signature 307 324 2.8E-70 T 01-11-2018 D3790_09460 d774e80761d3f184ca94d3c175574552 325 PRINTS PR01002 Flagellar protein FlgJ signature 27 50 2.8E-70 T 01-11-2018 D3790_09460 d774e80761d3f184ca94d3c175574552 325 PRINTS PR01002 Flagellar protein FlgJ signature 225 246 2.8E-70 T 01-11-2018 D3790_09460 d774e80761d3f184ca94d3c175574552 325 Gene3D G3DSA:2.10.70.40 203 244 4.3E-23 T 01-11-2018 D3790_09460 d774e80761d3f184ca94d3c175574552 325 Pfam PF10135 Rod binding protein 49 95 1.9E-15 T 01-11-2018 IPR019301 Flagellar protein FlgJ, N-terminal D3790_09460 d774e80761d3f184ca94d3c175574552 325 Gene3D G3DSA:1.10.530.10 245 313 2.0E-21 T 01-11-2018 D3790_09460 d774e80761d3f184ca94d3c175574552 325 Gene3D G3DSA:1.10.530.10 159 202 5.5E-7 T 01-11-2018 D3790_09460 d774e80761d3f184ca94d3c175574552 325 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 173 307 9.2E-20 T 01-11-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 D3790_09460 d774e80761d3f184ca94d3c175574552 325 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 11 307 1.9E-103 T 01-11-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 D3790_09460 d774e80761d3f184ca94d3c175574552 325 SMART SM00047 154 318 3.8E-39 T 01-11-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 D3790_17535 3770e5ae84ce149bc3a18477b085c6c7 322 Pfam PF00571 CBS domain 268 319 1.1E-5 T 01-11-2018 IPR000644 CBS domain D3790_17535 3770e5ae84ce149bc3a18477b085c6c7 322 Pfam PF00571 CBS domain 201 255 1.9E-4 T 01-11-2018 IPR000644 CBS domain D3790_17535 3770e5ae84ce149bc3a18477b085c6c7 322 Pfam PF01380 SIS domain 42 171 1.4E-33 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 D3790_17535 3770e5ae84ce149bc3a18477b085c6c7 322 PIRSF PIRSF004692 1 322 4.1E-131 T 01-11-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 D3790_17535 3770e5ae84ce149bc3a18477b085c6c7 322 Gene3D G3DSA:3.40.50.10490 3 194 2.0E-64 T 01-11-2018 D3790_17535 3770e5ae84ce149bc3a18477b085c6c7 322 SUPERFAMILY SSF53697 9 319 1.67E-68 T 01-11-2018 D3790_17535 3770e5ae84ce149bc3a18477b085c6c7 322 Gene3D G3DSA:3.10.580.10 195 319 1.0E-43 T 01-11-2018 D3790_17535 3770e5ae84ce149bc3a18477b085c6c7 322 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 44 312 3.0E-121 T 01-11-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 D3790_03685 0b7c8dd98d725255f4babeeca63b6602 388 SUPERFAMILY SSF56059 1 238 5.3E-80 T 01-11-2018 D3790_03685 0b7c8dd98d725255f4babeeca63b6602 388 SUPERFAMILY SSF52210 239 384 2.49E-52 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D3790_03685 0b7c8dd98d725255f4babeeca63b6602 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.8E-177 T 01-11-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D3790_03685 0b7c8dd98d725255f4babeeca63b6602 388 Gene3D G3DSA:3.30.470.20 1 234 1.5E-94 T 01-11-2018 D3790_03685 0b7c8dd98d725255f4babeeca63b6602 388 PIRSF PIRSF001554 1 388 1.3E-153 T 01-11-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D3790_03685 0b7c8dd98d725255f4babeeca63b6602 388 Gene3D G3DSA:3.30.1490.20 21 104 1.5E-94 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D3790_03685 0b7c8dd98d725255f4babeeca63b6602 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 01-11-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D3790_03685 0b7c8dd98d725255f4babeeca63b6602 388 Pfam PF08442 ATP-grasp domain 2 203 9.4E-82 T 01-11-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D3790_03685 0b7c8dd98d725255f4babeeca63b6602 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.157 T 01-11-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D3790_03685 0b7c8dd98d725255f4babeeca63b6602 388 Gene3D G3DSA:3.40.50.261 240 387 2.4E-56 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D3790_03685 0b7c8dd98d725255f4babeeca63b6602 388 Pfam PF00549 CoA-ligase 262 382 4.6E-24 T 01-11-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D3790_13930 16e3bf185ce9c57b005e019a0d275d2c 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 3.1E-32 T 01-11-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 D3790_13930 16e3bf185ce9c57b005e019a0d275d2c 419 SMART SM00382 170 355 5.0E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_13930 16e3bf185ce9c57b005e019a0d275d2c 419 SMART SM00959 5 47 3.1E-17 T 01-11-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 D3790_13930 16e3bf185ce9c57b005e019a0d275d2c 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 6.4E-23 T 01-11-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D3790_13930 16e3bf185ce9c57b005e019a0d275d2c 419 SUPERFAMILY SSF68912 1 46 3.92E-12 T 01-11-2018 IPR036269 Rho termination factor, N-terminal domain superfamily D3790_13930 16e3bf185ce9c57b005e019a0d275d2c 419 Gene3D G3DSA:1.10.720.10 1 47 2.7E-24 T 01-11-2018 D3790_13930 16e3bf185ce9c57b005e019a0d275d2c 419 Gene3D G3DSA:3.40.50.300 130 417 1.2E-134 T 01-11-2018 D3790_13930 16e3bf185ce9c57b005e019a0d275d2c 419 SMART SM00357 52 118 9.6E-19 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 D3790_13930 16e3bf185ce9c57b005e019a0d275d2c 419 SUPERFAMILY SSF52540 90 371 5.56E-68 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_13930 16e3bf185ce9c57b005e019a0d275d2c 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.4E-221 T 01-11-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 D3790_13930 16e3bf185ce9c57b005e019a0d275d2c 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 249.941 T 01-11-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 D3790_13930 16e3bf185ce9c57b005e019a0d275d2c 419 SUPERFAMILY SSF50249 48 125 9.0E-30 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_13930 16e3bf185ce9c57b005e019a0d275d2c 419 Gene3D G3DSA:2.40.50.140 48 117 1.3E-35 T 01-11-2018 D3790_13930 16e3bf185ce9c57b005e019a0d275d2c 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 2.0E-16 T 01-11-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 D3790_01460 07a30a699281eacc93f07847438bef10 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 4 328 5.6E-134 T 01-11-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase D3790_01460 07a30a699281eacc93f07847438bef10 342 Pfam PF04055 Radical SAM superfamily 118 207 1.4E-7 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D3790_01460 07a30a699281eacc93f07847438bef10 342 Pfam PF13353 4Fe-4S single cluster domain 111 183 1.3E-6 T 01-11-2018 D3790_01460 07a30a699281eacc93f07847438bef10 342 PIRSF PIRSF004911 6 342 1.0E-116 T 01-11-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase D3790_01460 07a30a699281eacc93f07847438bef10 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 335 1.3E-157 T 01-11-2018 IPR022462 Lysine-2,3-aminomutase-like D3790_01460 07a30a699281eacc93f07847438bef10 342 SUPERFAMILY SSF102114 102 324 8.24E-29 T 01-11-2018 D3790_01460 07a30a699281eacc93f07847438bef10 342 Gene3D G3DSA:3.20.20.70 51 334 3.2E-91 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_09325 0fe49c1261d3e6fe8c67d21e5da28525 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 87 100 4.3E-30 T 01-11-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 D3790_09325 0fe49c1261d3e6fe8c67d21e5da28525 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 100 115 4.3E-30 T 01-11-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 D3790_09325 0fe49c1261d3e6fe8c67d21e5da28525 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 71 87 4.3E-30 T 01-11-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 D3790_09325 0fe49c1261d3e6fe8c67d21e5da28525 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 54 70 4.3E-30 T 01-11-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 D3790_09325 0fe49c1261d3e6fe8c67d21e5da28525 135 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 46 2.1E-17 T 01-11-2018 IPR031576 Flagellar motor switch protein FliN, N-terminal D3790_09325 0fe49c1261d3e6fe8c67d21e5da28525 135 SUPERFAMILY SSF101801 52 133 7.06E-27 T 01-11-2018 IPR036429 SpoA-like superfamily D3790_09325 0fe49c1261d3e6fe8c67d21e5da28525 135 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 51 126 1.1E-33 T 01-11-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 D3790_09325 0fe49c1261d3e6fe8c67d21e5da28525 135 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 54 124 6.2E-26 T 01-11-2018 IPR001543 Surface presentation of antigen (SpoA) D3790_09325 0fe49c1261d3e6fe8c67d21e5da28525 135 Gene3D G3DSA:2.30.330.10 41 135 3.2E-35 T 01-11-2018 IPR036429 SpoA-like superfamily D3790_00495 c4bc41775aad9ce471f24750da85097b 1676 Gene3D G3DSA:1.10.510.10 558 713 9.2E-9 T 01-11-2018 D3790_00495 c4bc41775aad9ce471f24750da85097b 1676 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 622 690 6.1E-5 T 01-11-2018 D3790_00495 c4bc41775aad9ce471f24750da85097b 1676 Pfam PF13086 AAA domain 1088 1408 8.0E-48 T 01-11-2018 D3790_00495 c4bc41775aad9ce471f24750da85097b 1676 Pfam PF13087 AAA domain 1427 1632 2.8E-45 T 01-11-2018 D3790_00495 c4bc41775aad9ce471f24750da85097b 1676 SUPERFAMILY SSF52540 1087 1639 2.13E-46 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_00495 c4bc41775aad9ce471f24750da85097b 1676 SUPERFAMILY SSF56112 586 698 1.75E-11 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily D3790_00495 c4bc41775aad9ce471f24750da85097b 1676 SUPERFAMILY SSF56112 328 500 4.24E-11 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily D3790_00495 c4bc41775aad9ce471f24750da85097b 1676 Pfam PF08378 Nuclease-related domain 37 143 1.9E-12 T 01-11-2018 IPR011528 Nuclease-related domain, NERD D3790_00495 c4bc41775aad9ce471f24750da85097b 1676 Gene3D G3DSA:1.10.510.10 304 496 3.5E-12 T 01-11-2018 D3790_00495 c4bc41775aad9ce471f24750da85097b 1676 SMART SM00382 1102 1426 0.0012 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_00495 c4bc41775aad9ce471f24750da85097b 1676 Gene3D G3DSA:3.40.50.300 1447 1665 1.3E-42 T 01-11-2018 D3790_03400 15d807f89c4dd7d645d11b49cc125968 149 Pfam PF01475 Ferric uptake regulator family 11 130 3.5E-46 T 01-11-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 D3790_03400 15d807f89c4dd7d645d11b49cc125968 149 SUPERFAMILY SSF46785 5 133 9.58E-44 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_03400 15d807f89c4dd7d645d11b49cc125968 149 Gene3D G3DSA:3.30.1490.190 85 142 1.7E-23 T 01-11-2018 D3790_03400 15d807f89c4dd7d645d11b49cc125968 149 Gene3D G3DSA:1.10.10.10 1 83 6.4E-34 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_16315 5cd56b45a8f709b69fa0beb3f1f68dc2 247 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 247 37.233 T 01-11-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 D3790_16315 5cd56b45a8f709b69fa0beb3f1f68dc2 247 Gene3D G3DSA:3.40.50.150 57 247 2.4E-76 T 01-11-2018 D3790_16315 5cd56b45a8f709b69fa0beb3f1f68dc2 247 Pfam PF04445 Putative SAM-dependent methyltransferase 19 246 2.7E-111 T 01-11-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 D3790_16315 5cd56b45a8f709b69fa0beb3f1f68dc2 247 Gene3D G3DSA:3.40.1630.10 1 56 9.3E-32 T 01-11-2018 D3790_16315 5cd56b45a8f709b69fa0beb3f1f68dc2 247 SUPERFAMILY SSF53335 3 246 1.09E-78 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_10975 f0aa08385e79b5be591a29b161186e56 460 Pfam PF02875 Mur ligase family, glutamate ligase domain 321 400 2.5E-13 T 01-11-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 D3790_10975 f0aa08385e79b5be591a29b161186e56 460 Gene3D G3DSA:3.40.1390.10 1 86 1.9E-24 T 01-11-2018 D3790_10975 f0aa08385e79b5be591a29b161186e56 460 Pfam PF01225 Mur ligase family, catalytic domain 30 84 2.7E-7 T 01-11-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 D3790_10975 f0aa08385e79b5be591a29b161186e56 460 Gene3D G3DSA:3.40.1190.10 87 319 1.1E-80 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D3790_10975 f0aa08385e79b5be591a29b161186e56 460 SUPERFAMILY SSF53623 106 318 6.41E-55 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D3790_10975 f0aa08385e79b5be591a29b161186e56 460 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 35 454 8.5E-140 T 01-11-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D3790_10975 f0aa08385e79b5be591a29b161186e56 460 Gene3D G3DSA:3.90.190.20 320 460 2.2E-46 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D3790_10975 f0aa08385e79b5be591a29b161186e56 460 Pfam PF08245 Mur ligase middle domain 112 301 6.4E-46 T 01-11-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 D3790_10975 f0aa08385e79b5be591a29b161186e56 460 SUPERFAMILY SSF53244 321 454 3.36E-39 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D3790_10975 f0aa08385e79b5be591a29b161186e56 460 SUPERFAMILY SSF63418 1 103 6.93E-24 T 01-11-2018 IPR035911 MurE/MurF, N-terminal D3790_10975 f0aa08385e79b5be591a29b161186e56 460 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 455 33.706 T 01-11-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D3790_08290 ed4c197adb85b8aff89a3906c52c54f5 138 SUPERFAMILY SSF143100 1 60 1.57E-11 T 01-11-2018 IPR035069 TTHA1013/TTHA0281-like D3790_08290 ed4c197adb85b8aff89a3906c52c54f5 138 Gene3D G3DSA:1.10.260.40 79 138 1.9E-5 T 01-11-2018 D3790_08290 ed4c197adb85b8aff89a3906c52c54f5 138 Gene3D G3DSA:3.30.160.250 1 78 5.1E-15 T 01-11-2018 D3790_18040 ce48d28b93aab50ce2116bfbb6726565 454 Gene3D G3DSA:1.20.1600.10 23 442 7.2E-131 T 01-11-2018 D3790_18040 ce48d28b93aab50ce2116bfbb6726565 454 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 434 5.3E-116 T 01-11-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 D3790_18040 ce48d28b93aab50ce2116bfbb6726565 454 Pfam PF02321 Outer membrane efflux protein 233 416 7.8E-33 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D3790_18040 ce48d28b93aab50ce2116bfbb6726565 454 Pfam PF02321 Outer membrane efflux protein 25 209 2.9E-25 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D3790_18040 ce48d28b93aab50ce2116bfbb6726565 454 SUPERFAMILY SSF56954 24 435 1.11E-87 T 01-11-2018 D3790_14435 72b6b83fff995855f671bc4a1971e8a4 257 SUPERFAMILY SSF53633 4 255 2.36E-59 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily D3790_14435 72b6b83fff995855f671bc4a1971e8a4 257 Pfam PF00696 Amino acid kinase family 4 234 4.9E-38 T 01-11-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D3790_14435 72b6b83fff995855f671bc4a1971e8a4 257 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 233 1.4E-70 T 01-11-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D3790_14435 72b6b83fff995855f671bc4a1971e8a4 257 PIRSF PIRSF000728 2 257 1.6E-70 T 01-11-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D3790_14435 72b6b83fff995855f671bc4a1971e8a4 257 Hamap MF_00082 Acetylglutamate kinase [argB]. 1 250 41.543 T 01-11-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D3790_14435 72b6b83fff995855f671bc4a1971e8a4 257 Gene3D G3DSA:3.40.1160.10 2 256 4.0E-70 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily D3790_04600 adc13a414f00b982c0cd8e6c80af53a4 924 Gene3D G3DSA:3.30.565.10 515 674 3.7E-19 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_04600 adc13a414f00b982c0cd8e6c80af53a4 924 Gene3D G3DSA:3.40.50.11620 686 797 1.0E-30 T 01-11-2018 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily D3790_04600 adc13a414f00b982c0cd8e6c80af53a4 924 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 8 919 23.244 T 01-11-2018 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 D3790_04600 adc13a414f00b982c0cd8e6c80af53a4 924 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 564 675 5.3E-10 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_04600 adc13a414f00b982c0cd8e6c80af53a4 924 SUPERFAMILY SSF55874 507 679 1.27E-17 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_04600 adc13a414f00b982c0cd8e6c80af53a4 924 Pfam PF01627 Hpt domain 842 903 3.7E-8 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D3790_04600 adc13a414f00b982c0cd8e6c80af53a4 924 SMART SM00387 564 677 4.8E-6 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_04600 adc13a414f00b982c0cd8e6c80af53a4 924 SUPERFAMILY SSF47226 839 918 7.2E-14 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 D3790_04600 adc13a414f00b982c0cd8e6c80af53a4 924 Gene3D G3DSA:1.10.287.130 456 514 3.7E-19 T 01-11-2018 D3790_04600 adc13a414f00b982c0cd8e6c80af53a4 924 Pfam PF16359 RcsD-ABL domain 687 787 1.9E-38 T 01-11-2018 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain D3790_04600 adc13a414f00b982c0cd8e6c80af53a4 924 Gene3D G3DSA:1.20.120.160 820 923 2.0E-8 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 D3790_16605 80a4ff758e2505839d92c36b98fd830c 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 2.1E-70 T 01-11-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 D3790_16605 80a4ff758e2505839d92c36b98fd830c 145 Gene3D G3DSA:3.50.80.10 1 145 1.0E-56 T 01-11-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily D3790_16605 80a4ff758e2505839d92c36b98fd830c 145 SUPERFAMILY SSF69500 1 144 7.72E-56 T 01-11-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily D3790_16605 80a4ff758e2505839d92c36b98fd830c 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.615 T 01-11-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 D3790_16605 80a4ff758e2505839d92c36b98fd830c 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 7.8E-53 T 01-11-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 D3790_06175 fdb5a3b38310b853b5fa5dd96021df57 282 Pfam PF01842 ACT domain 10 71 5.6E-8 T 01-11-2018 IPR002912 ACT domain D3790_06175 fdb5a3b38310b853b5fa5dd96021df57 282 Pfam PF00551 Formyl transferase 88 264 6.8E-52 T 01-11-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D3790_06175 fdb5a3b38310b853b5fa5dd96021df57 282 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 9 282 9.5E-127 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D3790_06175 fdb5a3b38310b853b5fa5dd96021df57 282 SUPERFAMILY SSF53328 88 281 2.88E-59 T 01-11-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D3790_06175 fdb5a3b38310b853b5fa5dd96021df57 282 SUPERFAMILY SSF55021 9 69 1.21E-8 T 01-11-2018 D3790_06175 fdb5a3b38310b853b5fa5dd96021df57 282 Gene3D G3DSA:3.30.70.260 3 84 1.0E-15 T 01-11-2018 D3790_06175 fdb5a3b38310b853b5fa5dd96021df57 282 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 282 45.556 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D3790_06175 fdb5a3b38310b853b5fa5dd96021df57 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 2.1E-66 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D3790_06175 fdb5a3b38310b853b5fa5dd96021df57 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 2.1E-66 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D3790_06175 fdb5a3b38310b853b5fa5dd96021df57 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 2.1E-66 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D3790_06175 fdb5a3b38310b853b5fa5dd96021df57 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 2.1E-66 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D3790_06175 fdb5a3b38310b853b5fa5dd96021df57 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 43 55 2.1E-66 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D3790_06175 fdb5a3b38310b853b5fa5dd96021df57 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 2.1E-66 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D3790_06175 fdb5a3b38310b853b5fa5dd96021df57 282 Gene3D G3DSA:3.40.50.170 87 282 3.9E-67 T 01-11-2018 D3790_06175 fdb5a3b38310b853b5fa5dd96021df57 282 PIRSF PIRSF036480 6 282 5.9E-115 T 01-11-2018 D3790_14245 9cd7e89467a8cf9fa08c689e2c225e8c 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.412 T 01-11-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 D3790_14245 9cd7e89467a8cf9fa08c689e2c225e8c 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 01-11-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14245 9cd7e89467a8cf9fa08c689e2c225e8c 100 Gene3D G3DSA:3.30.70.330 1 100 2.5E-38 T 01-11-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily D3790_14245 9cd7e89467a8cf9fa08c689e2c225e8c 100 Pfam PF00276 Ribosomal protein L23 9 95 3.8E-31 T 01-11-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 D3790_14245 9cd7e89467a8cf9fa08c689e2c225e8c 100 SUPERFAMILY SSF54189 6 97 1.91E-30 T 01-11-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_16555 7260b0edcb7c8dfd8d997e167f016eb5 577 Gene3D G3DSA:1.10.150.20 452 508 1.9E-6 T 01-11-2018 D3790_16555 7260b0edcb7c8dfd8d997e167f016eb5 577 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 41 321 8.9E-24 T 01-11-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 D3790_16555 7260b0edcb7c8dfd8d997e167f016eb5 577 Gene3D G3DSA:3.30.470.90 103 322 2.8E-30 T 01-11-2018 D3790_16555 7260b0edcb7c8dfd8d997e167f016eb5 577 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 327 399 1.1E-17 T 01-11-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 D3790_16555 7260b0edcb7c8dfd8d997e167f016eb5 577 Gene3D G3DSA:2.40.50.140 323 395 9.1E-14 T 01-11-2018 D3790_16555 7260b0edcb7c8dfd8d997e167f016eb5 577 SUPERFAMILY SSF47781 425 525 4.45E-14 T 01-11-2018 IPR010994 RuvA domain 2-like D3790_16555 7260b0edcb7c8dfd8d997e167f016eb5 577 Hamap MF_01587 DNA ligase B [ligB]. 4 576 49.381 T 01-11-2018 IPR020923 DNA ligase B GO:0003911|GO:0006259 D3790_16555 7260b0edcb7c8dfd8d997e167f016eb5 577 SMART SM00532 41 453 4.4E-36 T 01-11-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 D3790_16555 7260b0edcb7c8dfd8d997e167f016eb5 577 SUPERFAMILY SSF56091 37 321 5.33E-63 T 01-11-2018 D3790_16555 7260b0edcb7c8dfd8d997e167f016eb5 577 SUPERFAMILY SSF50249 324 402 3.6E-17 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_10220 a0fc7b2a658f3d46864bbb9e15c5dfac 394 Gene3D G3DSA:1.20.1250.20 16 388 4.1E-9 T 01-11-2018 D3790_10220 a0fc7b2a658f3d46864bbb9e15c5dfac 394 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 26 383 3.3E-82 T 01-11-2018 IPR010645 Uncharacterised MFS-type transporter YbfB D3790_10220 a0fc7b2a658f3d46864bbb9e15c5dfac 394 SUPERFAMILY SSF103473 17 386 1.31E-21 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_18980 b7d1dbcf8b1b862934ca286c0053b401 261 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 2.7E-76 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D3790_18980 b7d1dbcf8b1b862934ca286c0053b401 261 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 7 243 15.916 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D3790_18980 b7d1dbcf8b1b862934ca286c0053b401 261 ProSitePatterns PS01218 TatC family signature. 154 173 - T 01-11-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site D3790_18980 b7d1dbcf8b1b862934ca286c0053b401 261 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 8.0E-65 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D3790_18980 b7d1dbcf8b1b862934ca286c0053b401 261 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 2.1E-49 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D3790_18980 b7d1dbcf8b1b862934ca286c0053b401 261 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 2.1E-49 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D3790_18980 b7d1dbcf8b1b862934ca286c0053b401 261 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 2.1E-49 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D3790_18980 b7d1dbcf8b1b862934ca286c0053b401 261 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 2.1E-49 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D3790_08215 3885b3cdb3eac1ecda64af43ea857865 1023 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 3.4E-62 T 01-11-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 D3790_08215 3885b3cdb3eac1ecda64af43ea857865 1023 SUPERFAMILY SSF55103 258 542 2.94E-51 T 01-11-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 D3790_08215 3885b3cdb3eac1ecda64af43ea857865 1023 SUPERFAMILY SSF46548 517 691 2.09E-7 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 D3790_08215 3885b3cdb3eac1ecda64af43ea857865 1023 SUPERFAMILY SSF56176 14 282 1.74E-52 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 D3790_08215 3885b3cdb3eac1ecda64af43ea857865 1023 Pfam PF01565 FAD binding domain 52 192 3.5E-37 T 01-11-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 D3790_08215 3885b3cdb3eac1ecda64af43ea857865 1023 Pfam PF13183 4Fe-4S dicluster domain 576 687 2.2E-12 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3790_08215 3885b3cdb3eac1ecda64af43ea857865 1023 Gene3D G3DSA:3.30.465.40 239 300 2.9E-5 T 01-11-2018 D3790_08215 3885b3cdb3eac1ecda64af43ea857865 1023 Gene3D G3DSA:3.30.465.40 22 231 2.0E-44 T 01-11-2018 D3790_08215 3885b3cdb3eac1ecda64af43ea857865 1023 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 673 684 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3790_12760 2fad13a894471edaaf1fe42d2ee1c58d 221 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 5.4E-94 T 01-11-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 D3790_12760 2fad13a894471edaaf1fe42d2ee1c58d 221 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_12760 2fad13a894471edaaf1fe42d2ee1c58d 221 Gene3D G3DSA:3.40.50.300 1 220 1.0E-64 T 01-11-2018 D3790_12760 2fad13a894471edaaf1fe42d2ee1c58d 221 SMART SM00382 27 213 1.0E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_12760 2fad13a894471edaaf1fe42d2ee1c58d 221 SUPERFAMILY SSF52540 1 216 6.78E-67 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_12760 2fad13a894471edaaf1fe42d2ee1c58d 221 Pfam PF00005 ABC transporter 18 165 1.3E-36 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_08790 36d5cf860b64d9a4e768c941febcae93 346 Gene3D G3DSA:3.30.420.10 161 326 6.7E-17 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_08790 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF13551 Winged helix-turn helix 11 73 1.8E-19 T 01-11-2018 D3790_08790 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF46689 18 114 2.51E-5 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_08790 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF53098 160 333 7.21E-38 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_08790 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF00665 Integrase core domain 161 283 2.8E-21 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 D3790_00505 36d5cf860b64d9a4e768c941febcae93 346 Gene3D G3DSA:3.30.420.10 161 326 6.7E-17 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_00505 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF13551 Winged helix-turn helix 11 73 1.8E-19 T 01-11-2018 D3790_00505 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF46689 18 114 2.51E-5 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_00505 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF53098 160 333 7.21E-38 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_00505 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF00665 Integrase core domain 161 283 2.8E-21 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 D3790_01635 36d5cf860b64d9a4e768c941febcae93 346 Gene3D G3DSA:3.30.420.10 161 326 6.7E-17 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_01635 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF13551 Winged helix-turn helix 11 73 1.8E-19 T 01-11-2018 D3790_01635 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF46689 18 114 2.51E-5 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_01635 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF53098 160 333 7.21E-38 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_01635 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF00665 Integrase core domain 161 283 2.8E-21 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 D3790_06575 36d5cf860b64d9a4e768c941febcae93 346 Gene3D G3DSA:3.30.420.10 161 326 6.7E-17 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_06575 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF13551 Winged helix-turn helix 11 73 1.8E-19 T 01-11-2018 D3790_06575 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF46689 18 114 2.51E-5 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_06575 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF53098 160 333 7.21E-38 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_06575 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF00665 Integrase core domain 161 283 2.8E-21 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 D3790_03465 36d5cf860b64d9a4e768c941febcae93 346 Gene3D G3DSA:3.30.420.10 161 326 6.7E-17 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_03465 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF13551 Winged helix-turn helix 11 73 1.8E-19 T 01-11-2018 D3790_03465 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF46689 18 114 2.51E-5 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_03465 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF53098 160 333 7.21E-38 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_03465 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF00665 Integrase core domain 161 283 2.8E-21 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 D3790_01250 36d5cf860b64d9a4e768c941febcae93 346 Gene3D G3DSA:3.30.420.10 161 326 6.7E-17 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_01250 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF13551 Winged helix-turn helix 11 73 1.8E-19 T 01-11-2018 D3790_01250 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF46689 18 114 2.51E-5 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_01250 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF53098 160 333 7.21E-38 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_01250 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF00665 Integrase core domain 161 283 2.8E-21 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 D3790_06590 36d5cf860b64d9a4e768c941febcae93 346 Gene3D G3DSA:3.30.420.10 161 326 6.7E-17 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_06590 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF13551 Winged helix-turn helix 11 73 1.8E-19 T 01-11-2018 D3790_06590 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF46689 18 114 2.51E-5 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_06590 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF53098 160 333 7.21E-38 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_06590 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF00665 Integrase core domain 161 283 2.8E-21 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 D3790_17265 36d5cf860b64d9a4e768c941febcae93 346 Gene3D G3DSA:3.30.420.10 161 326 6.7E-17 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_17265 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF13551 Winged helix-turn helix 11 73 1.8E-19 T 01-11-2018 D3790_17265 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF46689 18 114 2.51E-5 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_17265 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF53098 160 333 7.21E-38 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_17265 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF00665 Integrase core domain 161 283 2.8E-21 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 D3790_01300 36d5cf860b64d9a4e768c941febcae93 346 Gene3D G3DSA:3.30.420.10 161 326 6.7E-17 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_01300 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF13551 Winged helix-turn helix 11 73 1.8E-19 T 01-11-2018 D3790_01300 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF46689 18 114 2.51E-5 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_01300 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF53098 160 333 7.21E-38 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_01300 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF00665 Integrase core domain 161 283 2.8E-21 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 D3790_03380 36d5cf860b64d9a4e768c941febcae93 346 Gene3D G3DSA:3.30.420.10 161 326 6.7E-17 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_03380 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF13551 Winged helix-turn helix 11 73 1.8E-19 T 01-11-2018 D3790_03380 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF46689 18 114 2.51E-5 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_03380 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF53098 160 333 7.21E-38 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_03380 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF00665 Integrase core domain 161 283 2.8E-21 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 D3790_08725 36d5cf860b64d9a4e768c941febcae93 346 Gene3D G3DSA:3.30.420.10 161 326 6.7E-17 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_08725 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF13551 Winged helix-turn helix 11 73 1.8E-19 T 01-11-2018 D3790_08725 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF46689 18 114 2.51E-5 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_08725 36d5cf860b64d9a4e768c941febcae93 346 SUPERFAMILY SSF53098 160 333 7.21E-38 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_08725 36d5cf860b64d9a4e768c941febcae93 346 Pfam PF00665 Integrase core domain 161 283 2.8E-21 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 D3790_14805 1170cac365d1b651118f7133f64a9f48 317 Gene3D G3DSA:3.20.20.370 2 314 6.8E-23 T 01-11-2018 D3790_14805 1170cac365d1b651118f7133f64a9f48 317 SUPERFAMILY SSF88713 3 178 1.56E-10 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 D3790_15570 65135aae6936c15722f81cc9204d1084 366 SUPERFAMILY SSF55979 125 244 2.25E-30 T 01-11-2018 D3790_15570 65135aae6936c15722f81cc9204d1084 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 4.9E-41 T 01-11-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 D3790_15570 65135aae6936c15722f81cc9204d1084 366 PIRSF PIRSF000804 1 366 1.9E-117 T 01-11-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 D3790_15570 65135aae6936c15722f81cc9204d1084 366 SMART SM00480 17 362 2.4E-166 T 01-11-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 D3790_15570 65135aae6936c15722f81cc9204d1084 366 Gene3D G3DSA:3.10.150.10 1 123 3.6E-43 T 01-11-2018 D3790_15570 65135aae6936c15722f81cc9204d1084 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.6E-115 T 01-11-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 D3790_15570 65135aae6936c15722f81cc9204d1084 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 3.7E-45 T 01-11-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 D3790_15570 65135aae6936c15722f81cc9204d1084 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 2.0E-38 T 01-11-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 D3790_15570 65135aae6936c15722f81cc9204d1084 366 SUPERFAMILY SSF55979 245 366 1.23E-37 T 01-11-2018 D3790_15570 65135aae6936c15722f81cc9204d1084 366 Gene3D G3DSA:3.10.150.10 124 247 1.5E-39 T 01-11-2018 D3790_15570 65135aae6936c15722f81cc9204d1084 366 Gene3D G3DSA:3.10.150.10 248 366 1.5E-41 T 01-11-2018 D3790_15570 65135aae6936c15722f81cc9204d1084 366 SUPERFAMILY SSF55979 1 121 6.52E-27 T 01-11-2018 D3790_00825 d18dc5385d8bff118442a157614e07f6 1539 Pfam PF04829 Pre-toxin domain with VENN motif 1194 1234 3.9E-5 T 01-11-2018 IPR006914 VENN motif-containing domain D3790_00825 d18dc5385d8bff118442a157614e07f6 1539 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 63 160 2.9E-22 T 01-11-2018 IPR008638 Filamentous haemagglutinin, N-terminal D3790_00825 d18dc5385d8bff118442a157614e07f6 1539 Gene3D G3DSA:2.160.20.10 31 321 2.3E-95 T 01-11-2018 IPR012334 Pectin lyase fold D3790_00825 d18dc5385d8bff118442a157614e07f6 1539 Pfam PF05860 haemagglutination activity domain 37 163 8.8E-33 T 01-11-2018 IPR008638 Filamentous haemagglutinin, N-terminal D3790_00825 d18dc5385d8bff118442a157614e07f6 1539 SUPERFAMILY SSF51126 38 336 1.88E-65 T 01-11-2018 IPR011050 Pectin lyase fold/virulence factor D3790_00825 d18dc5385d8bff118442a157614e07f6 1539 Pfam PF04830 Possible hemagglutinin (DUF637) 1011 1175 1.5E-49 T 01-11-2018 IPR006915 Domain of unknown function DUF637, haemagglutinin putative D3790_00825 d18dc5385d8bff118442a157614e07f6 1539 SMART SM00912 45 165 2.3E-47 T 01-11-2018 IPR008638 Filamentous haemagglutinin, N-terminal D3790_00825 d18dc5385d8bff118442a157614e07f6 1539 Pfam PF13930 DNA/RNA non-specific endonuclease 1399 1523 1.3E-35 T 01-11-2018 D3790_03860 a08c4fa51823736c1afd88a6229ff034 257 Gene3D G3DSA:3.40.50.150 16 204 3.5E-34 T 01-11-2018 D3790_03860 a08c4fa51823736c1afd88a6229ff034 257 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 16 254 1.5E-67 T 01-11-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 D3790_03860 a08c4fa51823736c1afd88a6229ff034 257 Pfam PF08241 Methyltransferase domain 52 143 2.0E-23 T 01-11-2018 IPR013216 Methyltransferase type 11 GO:0008168 D3790_03860 a08c4fa51823736c1afd88a6229ff034 257 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 8 255 29.202 T 01-11-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 D3790_03860 a08c4fa51823736c1afd88a6229ff034 257 SUPERFAMILY SSF53335 14 196 1.69E-38 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_06075 91f663bbd9eab249c9d1b2907bd6179f 433 Gene3D G3DSA:3.50.50.60 105 404 5.2E-49 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_06075 91f663bbd9eab249c9d1b2907bd6179f 433 Gene3D G3DSA:3.30.9.10 134 361 5.2E-49 T 01-11-2018 D3790_06075 91f663bbd9eab249c9d1b2907bd6179f 433 SUPERFAMILY SSF51905 1 420 1.68E-52 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_06075 91f663bbd9eab249c9d1b2907bd6179f 433 Gene3D G3DSA:3.50.50.60 1 73 1.9E-11 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_06075 91f663bbd9eab249c9d1b2907bd6179f 433 Pfam PF01266 FAD dependent oxidoreductase 2 397 3.4E-71 T 01-11-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 D3790_06075 91f663bbd9eab249c9d1b2907bd6179f 433 SUPERFAMILY SSF54373 269 359 1.83E-14 T 01-11-2018 D3790_06075 91f663bbd9eab249c9d1b2907bd6179f 433 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 49.606 T 01-11-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 D3790_14875 79bbd2b173f2138dd24209c6c0c856b6 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 4 324 37.664 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D3790_14875 79bbd2b173f2138dd24209c6c0c856b6 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 6 160 1.1E-49 T 01-11-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D3790_14875 79bbd2b173f2138dd24209c6c0c856b6 339 SUPERFAMILY SSF48179 182 333 1.21E-57 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D3790_14875 79bbd2b173f2138dd24209c6c0c856b6 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 182 321 6.3E-53 T 01-11-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D3790_14875 79bbd2b173f2138dd24209c6c0c856b6 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 134 154 7.6E-42 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D3790_14875 79bbd2b173f2138dd24209c6c0c856b6 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 175 199 7.6E-42 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D3790_14875 79bbd2b173f2138dd24209c6c0c856b6 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 8 25 7.6E-42 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D3790_14875 79bbd2b173f2138dd24209c6c0c856b6 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 200 224 7.6E-42 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D3790_14875 79bbd2b173f2138dd24209c6c0c856b6 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 7.6E-42 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D3790_14875 79bbd2b173f2138dd24209c6c0c856b6 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 240 257 7.6E-42 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D3790_14875 79bbd2b173f2138dd24209c6c0c856b6 339 Gene3D G3DSA:3.40.50.720 1 189 7.4E-56 T 01-11-2018 D3790_14875 79bbd2b173f2138dd24209c6c0c856b6 339 Gene3D G3DSA:1.10.1040.10 191 338 2.7E-52 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 D3790_14875 79bbd2b173f2138dd24209c6c0c856b6 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 190 211 - T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D3790_14875 79bbd2b173f2138dd24209c6c0c856b6 339 SUPERFAMILY SSF51735 6 180 2.58E-52 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_14875 79bbd2b173f2138dd24209c6c0c856b6 339 PIRSF PIRSF000114 1 334 5.1E-100 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D3790_12440 4424e73117b2429fc1b466d6e92472da 262 Gene3D G3DSA:3.40.190.10 56 248 7.8E-23 T 01-11-2018 D3790_12440 4424e73117b2429fc1b466d6e92472da 262 Gene3D G3DSA:1.10.10.10 2 53 4.1E-7 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_12440 4424e73117b2429fc1b466d6e92472da 262 Gene3D G3DSA:3.40.190.10 127 234 7.8E-23 T 01-11-2018 D3790_12440 4424e73117b2429fc1b466d6e92472da 262 SUPERFAMILY SSF46785 4 50 1.97E-5 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_12440 4424e73117b2429fc1b466d6e92472da 262 SUPERFAMILY SSF53850 51 256 1.52E-17 T 01-11-2018 D3790_12440 4424e73117b2429fc1b466d6e92472da 262 Pfam PF03466 LysR substrate binding domain 54 249 7.4E-15 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_12390 276f9808f6fa2f3e4a0e40918fb61c39 481 Pfam PF00474 Sodium:solute symporter family 36 432 1.4E-127 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 D3790_12390 276f9808f6fa2f3e4a0e40918fb61c39 481 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 01-11-2018 IPR018212 Sodium/solute symporter, conserved site D3790_12390 276f9808f6fa2f3e4a0e40918fb61c39 481 Gene3D G3DSA:1.20.1730.10 26 479 4.2E-80 T 01-11-2018 IPR038377 Sodium/glucose symporter superfamily D3790_12390 276f9808f6fa2f3e4a0e40918fb61c39 481 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 6.5E-104 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 D3790_12390 276f9808f6fa2f3e4a0e40918fb61c39 481 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 472 2.0E-227 T 01-11-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0036376 D3790_12390 276f9808f6fa2f3e4a0e40918fb61c39 481 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 01-11-2018 IPR018212 Sodium/solute symporter, conserved site D3790_13470 8d816ef6423c983e594a824a0f20f1f1 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.031 T 01-11-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 D3790_13470 8d816ef6423c983e594a824a0f20f1f1 176 Pfam PF00719 Inorganic pyrophosphatase 18 172 9.8E-55 T 01-11-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 D3790_13470 8d816ef6423c983e594a824a0f20f1f1 176 Gene3D G3DSA:3.90.80.10 2 176 4.5E-70 T 01-11-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 D3790_13470 8d816ef6423c983e594a824a0f20f1f1 176 SUPERFAMILY SSF50324 3 173 2.22E-67 T 01-11-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 D3790_13470 8d816ef6423c983e594a824a0f20f1f1 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 01-11-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 D3790_03935 3fa28442de61b17eff34e382182faf27 498 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 485 51.136 T 01-11-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 D3790_03935 3fa28442de61b17eff34e382182faf27 498 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 01-11-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D3790_03935 3fa28442de61b17eff34e382182faf27 498 Gene3D G3DSA:3.40.50.300 214 422 3.5E-48 T 01-11-2018 D3790_03935 3fa28442de61b17eff34e382182faf27 498 Pfam PF00271 Helicase conserved C-terminal domain 239 339 2.1E-25 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_03935 3fa28442de61b17eff34e382182faf27 498 Gene3D G3DSA:3.40.50.300 1 211 5.5E-79 T 01-11-2018 D3790_03935 3fa28442de61b17eff34e382182faf27 498 SMART SM00487 20 223 6.2E-62 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_03935 3fa28442de61b17eff34e382182faf27 498 Pfam PF00270 DEAD/DEAH box helicase 25 197 5.3E-52 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D3790_03935 3fa28442de61b17eff34e382182faf27 498 SUPERFAMILY SSF52540 75 361 1.93E-72 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_03935 3fa28442de61b17eff34e382182faf27 498 SMART SM00490 259 340 9.3E-30 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_01440 9cd9b513b29205b42d5b969ccc29f551 177 Pfam PF04186 FxsA cytoplasmic membrane protein 8 111 1.6E-30 T 01-11-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 D3790_14285 7d3bab75e5a6682c5df1aee568124909 469 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 62 428 8.0E-133 T 01-11-2018 IPR030931 Group II intron reverse transcriptase/maturase D3790_14285 7d3bab75e5a6682c5df1aee568124909 469 Pfam PF08388 Group II intron, maturase-specific domain 364 437 9.8E-18 T 01-11-2018 IPR013597 Group II intron, maturase-specific D3790_14285 7d3bab75e5a6682c5df1aee568124909 469 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 180 198 5.5E-7 T 01-11-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D3790_14285 7d3bab75e5a6682c5df1aee568124909 469 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 113 126 5.5E-7 T 01-11-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D3790_14285 7d3bab75e5a6682c5df1aee568124909 469 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 271 282 5.5E-7 T 01-11-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D3790_14285 7d3bab75e5a6682c5df1aee568124909 469 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 239 252 5.5E-7 T 01-11-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D3790_14285 7d3bab75e5a6682c5df1aee568124909 469 SUPERFAMILY SSF56672 70 416 9.64E-60 T 01-11-2018 D3790_14285 7d3bab75e5a6682c5df1aee568124909 469 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 118 338 1.0E-48 T 01-11-2018 IPR000477 Reverse transcriptase domain D3790_19240 c1fd55c44b178d5df9001ef080f86d60 562 SUPERFAMILY SSF52540 328 548 6.2E-65 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_19240 c1fd55c44b178d5df9001ef080f86d60 562 Pfam PF00005 ABC transporter 354 502 5.2E-34 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_19240 c1fd55c44b178d5df9001ef080f86d60 562 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_19240 c1fd55c44b178d5df9001ef080f86d60 562 Gene3D G3DSA:3.40.50.300 321 561 2.6E-68 T 01-11-2018 D3790_19240 c1fd55c44b178d5df9001ef080f86d60 562 SUPERFAMILY SSF90123 10 486 2.49E-40 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_19240 c1fd55c44b178d5df9001ef080f86d60 562 SMART SM00382 362 546 4.2E-18 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_19240 c1fd55c44b178d5df9001ef080f86d60 562 Pfam PF00664 ABC transporter transmembrane region 25 287 1.8E-24 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D3790_19240 c1fd55c44b178d5df9001ef080f86d60 562 Gene3D G3DSA:1.20.1560.10 8 319 1.5E-42 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_12850 6fca7b7ce4126c07d4980b726e116db6 244 SUPERFAMILY SSF54292 3 106 5.12E-29 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D3790_12850 6fca7b7ce4126c07d4980b726e116db6 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 01-11-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 D3790_12850 6fca7b7ce4126c07d4980b726e116db6 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3790_12850 6fca7b7ce4126c07d4980b726e116db6 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 1.3E-11 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3790_12850 6fca7b7ce4126c07d4980b726e116db6 244 Gene3D G3DSA:1.10.1060.10 107 244 4.9E-51 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 D3790_12850 6fca7b7ce4126c07d4980b726e116db6 244 Gene3D G3DSA:3.10.20.30 3 106 2.2E-34 T 01-11-2018 IPR012675 Beta-grasp domain superfamily D3790_12850 6fca7b7ce4126c07d4980b726e116db6 244 SUPERFAMILY SSF46548 107 232 9.77E-32 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 D3790_12850 6fca7b7ce4126c07d4980b726e116db6 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 111 1.7E-31 T 01-11-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_12850 6fca7b7ce4126c07d4980b726e116db6 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 1.2E-95 T 01-11-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_05125 e60f197b6ae4571b794649b838368a1d 56 Pfam PF01783 Ribosomal L32p protein family 2 56 4.1E-20 T 01-11-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_05125 e60f197b6ae4571b794649b838368a1d 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 4.1E-20 T 01-11-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_05125 e60f197b6ae4571b794649b838368a1d 56 SUPERFAMILY SSF57829 2 55 6.71E-19 T 01-11-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 D3790_05125 e60f197b6ae4571b794649b838368a1d 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.314 T 01-11-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_06630 98c6b5cb05e9c6469e55abe6d4f0c028 359 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 13 359 27.696 T 01-11-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 D3790_06630 98c6b5cb05e9c6469e55abe6d4f0c028 359 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 18 358 7.2E-136 T 01-11-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 D3790_06630 98c6b5cb05e9c6469e55abe6d4f0c028 359 Pfam PF03116 NQR2, RnfD, RnfE family 15 357 8.5E-106 T 01-11-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 D3790_02290 e2bfc4a135e1f78fe1ab92632fa7096d 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 431 584 2.0E-26 T 01-11-2018 IPR010918 PurM-like, C-terminal domain D3790_02290 e2bfc4a135e1f78fe1ab92632fa7096d 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 831 964 1.1E-12 T 01-11-2018 IPR010918 PurM-like, C-terminal domain D3790_02290 e2bfc4a135e1f78fe1ab92632fa7096d 1295 Gene3D G3DSA:1.10.8.750 152 212 1.1E-26 T 01-11-2018 D3790_02290 e2bfc4a135e1f78fe1ab92632fa7096d 1295 SUPERFAMILY SSF82697 1 151 5.75E-53 T 01-11-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D3790_02290 e2bfc4a135e1f78fe1ab92632fa7096d 1295 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1039 1292 1.3E-109 T 01-11-2018 D3790_02290 e2bfc4a135e1f78fe1ab92632fa7096d 1295 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1295 21.463 T 01-11-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D3790_02290 e2bfc4a135e1f78fe1ab92632fa7096d 1295 SUPERFAMILY SSF56042 431 613 1.64E-52 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily D3790_02290 e2bfc4a135e1f78fe1ab92632fa7096d 1295 Gene3D G3DSA:3.90.650.10 807 980 1.0E-29 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily D3790_02290 e2bfc4a135e1f78fe1ab92632fa7096d 1295 Gene3D G3DSA:3.90.650.10 421 605 6.3E-53 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily D3790_02290 e2bfc4a135e1f78fe1ab92632fa7096d 1295 SUPERFAMILY SSF56042 821 1033 4.64E-55 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily D3790_02290 e2bfc4a135e1f78fe1ab92632fa7096d 1295 SUPERFAMILY SSF52317 1036 1293 1.79E-99 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_02290 e2bfc4a135e1f78fe1ab92632fa7096d 1295 Gene3D G3DSA:3.30.1330.10 213 420 2.6E-42 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily D3790_02290 e2bfc4a135e1f78fe1ab92632fa7096d 1295 SUPERFAMILY SSF55326 220 427 1.22E-63 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily D3790_02290 e2bfc4a135e1f78fe1ab92632fa7096d 1295 Gene3D G3DSA:3.40.50.880 981 1295 1.8E-142 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_02290 e2bfc4a135e1f78fe1ab92632fa7096d 1295 SMART SM01211 1039 1294 3.0E-164 T 01-11-2018 D3790_02290 e2bfc4a135e1f78fe1ab92632fa7096d 1295 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1293 0.0 T 01-11-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D3790_02290 e2bfc4a135e1f78fe1ab92632fa7096d 1295 SUPERFAMILY SSF109736 157 219 2.75E-20 T 01-11-2018 D3790_02290 e2bfc4a135e1f78fe1ab92632fa7096d 1295 SUPERFAMILY SSF55326 619 815 1.52E-64 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily D3790_02290 e2bfc4a135e1f78fe1ab92632fa7096d 1295 Gene3D G3DSA:3.30.1330.10 613 806 2.2E-22 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily D3790_09415 888233417d45e21c4a9cedcfe9a49d12 285 Gene3D G3DSA:1.10.1040.10 186 285 1.4E-32 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 D3790_09415 888233417d45e21c4a9cedcfe9a49d12 285 SUPERFAMILY SSF48179 183 283 4.59E-32 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D3790_09415 888233417d45e21c4a9cedcfe9a49d12 285 Gene3D G3DSA:3.40.50.720 1 185 1.4E-49 T 01-11-2018 D3790_09415 888233417d45e21c4a9cedcfe9a49d12 285 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 184 280 1.9E-31 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D3790_09415 888233417d45e21c4a9cedcfe9a49d12 285 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2 181 1.1E-45 T 01-11-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D3790_09415 888233417d45e21c4a9cedcfe9a49d12 285 PIRSF PIRSF000105 1 285 1.9E-72 T 01-11-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 D3790_09415 888233417d45e21c4a9cedcfe9a49d12 285 SUPERFAMILY SSF51735 2 183 4.48E-43 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_15270 0495baf04de9d2d1f5594927aa490568 183 PIRSF PIRSF020785 1 183 3.6E-37 T 01-11-2018 IPR016778 Competence protein ComB D3790_15270 0495baf04de9d2d1f5594927aa490568 183 Pfam PF05137 Fimbrial assembly protein (PilN) 102 173 2.3E-10 T 01-11-2018 IPR007813 Fimbrial assembly PilN D3790_10420 9ffdbdbb790d421bcf98718c53c4573c 271 SUPERFAMILY SSF46689 167 217 5.08E-6 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_10420 9ffdbdbb790d421bcf98718c53c4573c 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 263 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 D3790_10420 9ffdbdbb790d421bcf98718c53c4573c 271 SMART SM00342 184 267 9.5E-30 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D3790_10420 9ffdbdbb790d421bcf98718c53c4573c 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 1.6E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D3790_10420 9ffdbdbb790d421bcf98718c53c4573c 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 1.6E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D3790_10420 9ffdbdbb790d421bcf98718c53c4573c 271 Gene3D G3DSA:1.10.10.60 163 270 1.1E-28 T 01-11-2018 D3790_10420 9ffdbdbb790d421bcf98718c53c4573c 271 Pfam PF12833 Helix-turn-helix domain 191 267 9.0E-23 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D3790_10420 9ffdbdbb790d421bcf98718c53c4573c 271 SUPERFAMILY SSF46689 221 267 1.05E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_03230 9de1996bb68a09c22e43e8076ac6a13e 625 Gene3D G3DSA:3.40.710.10 249 616 6.4E-95 T 01-11-2018 D3790_03230 9de1996bb68a09c22e43e8076ac6a13e 625 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 8.3E-47 T 01-11-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 D3790_03230 9de1996bb68a09c22e43e8076ac6a13e 625 Gene3D G3DSA:3.30.1390.30 86 161 1.7E-52 T 01-11-2018 D3790_03230 9de1996bb68a09c22e43e8076ac6a13e 625 Gene3D G3DSA:3.90.1310.10 65 248 1.7E-52 T 01-11-2018 D3790_03230 9de1996bb68a09c22e43e8076ac6a13e 625 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 614 52.393 T 01-11-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D3790_03230 9de1996bb68a09c22e43e8076ac6a13e 625 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 607 7.9E-85 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 D3790_03230 9de1996bb68a09c22e43e8076ac6a13e 625 SUPERFAMILY SSF56601 255 610 2.39E-93 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like D3790_03230 9de1996bb68a09c22e43e8076ac6a13e 625 SUPERFAMILY SSF56519 58 254 2.62E-52 T 01-11-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 D3790_03230 9de1996bb68a09c22e43e8076ac6a13e 625 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 610 7.4E-236 T 01-11-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D3790_19375 a51f5e00ad98ca0636e744dd6408a79a 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 2.2E-42 T 01-11-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D3790_19375 a51f5e00ad98ca0636e744dd6408a79a 273 SUPERFAMILY SSF51735 5 272 4.7E-52 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_19375 a51f5e00ad98ca0636e744dd6408a79a 273 PIRSF PIRSF000161 4 272 2.6E-90 T 01-11-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D3790_19375 a51f5e00ad98ca0636e744dd6408a79a 273 SUPERFAMILY SSF55347 131 240 1.33E-36 T 01-11-2018 D3790_19375 a51f5e00ad98ca0636e744dd6408a79a 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 34.917 T 01-11-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D3790_19375 a51f5e00ad98ca0636e744dd6408a79a 273 Gene3D G3DSA:3.40.50.720 7 268 1.6E-102 T 01-11-2018 D3790_19375 a51f5e00ad98ca0636e744dd6408a79a 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 268 1.6E-103 T 01-11-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D3790_19375 a51f5e00ad98ca0636e744dd6408a79a 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 01-11-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D3790_19375 a51f5e00ad98ca0636e744dd6408a79a 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 3.3E-42 T 01-11-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D3790_19375 a51f5e00ad98ca0636e744dd6408a79a 273 Gene3D G3DSA:3.30.360.10 131 238 1.6E-102 T 01-11-2018 D3790_05440 2a1a98aa6be52a0388a99ff0f99c43b0 437 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 01-11-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 D3790_05440 2a1a98aa6be52a0388a99ff0f99c43b0 437 Pfam PF00860 Permease family 16 382 3.0E-103 T 01-11-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 D3790_05440 2a1a98aa6be52a0388a99ff0f99c43b0 437 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 405 1.6E-124 T 01-11-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 D3790_16560 006e9326998d7dab26586c6235d6cde8 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.381 T 01-11-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 D3790_16560 006e9326998d7dab26586c6235d6cde8 207 Gene3D G3DSA:3.40.50.300 8 183 8.3E-74 T 01-11-2018 D3790_16560 006e9326998d7dab26586c6235d6cde8 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 1.4E-74 T 01-11-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 D3790_16560 006e9326998d7dab26586c6235d6cde8 207 Gene3D G3DSA:3.30.63.10 37 96 8.3E-74 T 01-11-2018 D3790_16560 006e9326998d7dab26586c6235d6cde8 207 Pfam PF00625 Guanylate kinase 5 185 3.5E-64 T 01-11-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit D3790_16560 006e9326998d7dab26586c6235d6cde8 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 01-11-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 D3790_16560 006e9326998d7dab26586c6235d6cde8 207 SUPERFAMILY SSF52540 3 189 6.23E-69 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16560 006e9326998d7dab26586c6235d6cde8 207 SMART SM00072 3 187 2.1E-79 T 01-11-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit D3790_14770 69628f6fc921da7d0a4005c7966f522d 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.4E-27 T 01-11-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 D3790_14770 69628f6fc921da7d0a4005c7966f522d 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 01-11-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 D3790_14770 69628f6fc921da7d0a4005c7966f522d 269 SMART SM01232 129 221 1.0E-44 T 01-11-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 D3790_14770 69628f6fc921da7d0a4005c7966f522d 269 SMART SM00898 2 115 5.9E-50 T 01-11-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 D3790_14770 69628f6fc921da7d0a4005c7966f522d 269 Gene3D G3DSA:3.20.190.10 2 128 1.9E-43 T 01-11-2018 IPR035937 MutM-like, N-terminal D3790_14770 69628f6fc921da7d0a4005c7966f522d 269 SUPERFAMILY SSF46946 130 222 1.14E-29 T 01-11-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 D3790_14770 69628f6fc921da7d0a4005c7966f522d 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 8.5E-33 T 01-11-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 D3790_14770 69628f6fc921da7d0a4005c7966f522d 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 3.1E-100 T 01-11-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 D3790_14770 69628f6fc921da7d0a4005c7966f522d 269 Gene3D G3DSA:1.10.8.50 131 269 4.0E-46 T 01-11-2018 D3790_14770 69628f6fc921da7d0a4005c7966f522d 269 SUPERFAMILY SSF57716 217 268 2.62E-15 T 01-11-2018 D3790_14770 69628f6fc921da7d0a4005c7966f522d 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 42.748 T 01-11-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 D3790_14770 69628f6fc921da7d0a4005c7966f522d 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 4.0E-7 T 01-11-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 D3790_14770 69628f6fc921da7d0a4005c7966f522d 269 SUPERFAMILY SSF81624 2 138 9.03E-42 T 01-11-2018 IPR035937 MutM-like, N-terminal D3790_12360 39ea179a10a99b24557d32b351218527 347 Gene3D G3DSA:3.90.640.10 190 263 1.8E-131 T 01-11-2018 D3790_12360 39ea179a10a99b24557d32b351218527 347 Pfam PF06723 MreB/Mbl protein 11 338 7.7E-151 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D3790_12360 39ea179a10a99b24557d32b351218527 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 9.5E-66 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D3790_12360 39ea179a10a99b24557d32b351218527 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 9.5E-66 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D3790_12360 39ea179a10a99b24557d32b351218527 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 9.5E-66 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D3790_12360 39ea179a10a99b24557d32b351218527 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 9.5E-66 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D3790_12360 39ea179a10a99b24557d32b351218527 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 9.5E-66 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D3790_12360 39ea179a10a99b24557d32b351218527 347 SUPERFAMILY SSF53067 153 340 2.72E-51 T 01-11-2018 D3790_12360 39ea179a10a99b24557d32b351218527 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 1.5E-169 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D3790_12360 39ea179a10a99b24557d32b351218527 347 Gene3D G3DSA:3.30.420.40 158 321 1.8E-131 T 01-11-2018 D3790_12360 39ea179a10a99b24557d32b351218527 347 Gene3D G3DSA:3.30.420.40 14 331 1.8E-131 T 01-11-2018 D3790_12360 39ea179a10a99b24557d32b351218527 347 SUPERFAMILY SSF53067 9 152 8.91E-38 T 01-11-2018 D3790_06180 b992a8d56d84fd3f03bd72ca00644736 150 Pfam PF02810 SEC-C motif 133 150 2.2E-9 T 01-11-2018 IPR004027 SEC-C motif D3790_06180 b992a8d56d84fd3f03bd72ca00644736 150 SUPERFAMILY SSF54427 23 127 3.15E-34 T 01-11-2018 IPR032710 NTF2-like domain superfamily D3790_06180 b992a8d56d84fd3f03bd72ca00644736 150 SUPERFAMILY SSF103642 130 150 1.37E-7 T 01-11-2018 D3790_06180 b992a8d56d84fd3f03bd72ca00644736 150 Gene3D G3DSA:3.10.450.50 1 150 1.0E-54 T 01-11-2018 D3790_16770 f2a719835c1b30a6c36d6ada5b7ab9c1 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.5E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_16770 f2a719835c1b30a6c36d6ada5b7ab9c1 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.5E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_16770 f2a719835c1b30a6c36d6ada5b7ab9c1 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.5E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_16770 f2a719835c1b30a6c36d6ada5b7ab9c1 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.5E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_16770 f2a719835c1b30a6c36d6ada5b7ab9c1 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.5E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_16770 f2a719835c1b30a6c36d6ada5b7ab9c1 394 SUPERFAMILY SSF50447 205 301 1.94E-31 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily D3790_16770 f2a719835c1b30a6c36d6ada5b7ab9c1 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site D3790_16770 f2a719835c1b30a6c36d6ada5b7ab9c1 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.291 T 01-11-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D3790_16770 f2a719835c1b30a6c36d6ada5b7ab9c1 394 SUPERFAMILY SSF52540 6 219 5.4E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16770 f2a719835c1b30a6c36d6ada5b7ab9c1 394 SUPERFAMILY SSF50465 298 393 7.77E-36 T 01-11-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal D3790_16770 f2a719835c1b30a6c36d6ada5b7ab9c1 394 Gene3D G3DSA:2.40.30.10 206 334 3.6E-54 T 01-11-2018 D3790_16770 f2a719835c1b30a6c36d6ada5b7ab9c1 394 Gene3D G3DSA:3.40.50.300 1 203 2.7E-71 T 01-11-2018 D3790_16770 f2a719835c1b30a6c36d6ada5b7ab9c1 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.4E-17 T 01-11-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 D3790_16770 f2a719835c1b30a6c36d6ada5b7ab9c1 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 2.1E-238 T 01-11-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D3790_16770 f2a719835c1b30a6c36d6ada5b7ab9c1 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 4.3E-14 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D3790_16770 f2a719835c1b30a6c36d6ada5b7ab9c1 394 Gene3D G3DSA:2.40.30.10 338 393 4.8E-29 T 01-11-2018 D3790_16770 f2a719835c1b30a6c36d6ada5b7ab9c1 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 6.2E-59 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_16770 f2a719835c1b30a6c36d6ada5b7ab9c1 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.2E-33 T 01-11-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal D3790_04820 22f9121865fc048a8a03d32ea9381f62 330 SUPERFAMILY SSF53850 96 286 3.08E-24 T 01-11-2018 D3790_04820 22f9121865fc048a8a03d32ea9381f62 330 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 3.1E-17 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_04820 22f9121865fc048a8a03d32ea9381f62 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.9E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_04820 22f9121865fc048a8a03d32ea9381f62 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.9E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_04820 22f9121865fc048a8a03d32ea9381f62 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.9E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_04820 22f9121865fc048a8a03d32ea9381f62 330 Gene3D G3DSA:3.40.190.10 103 269 6.2E-53 T 01-11-2018 D3790_04820 22f9121865fc048a8a03d32ea9381f62 330 SUPERFAMILY SSF46785 10 119 2.85E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_04820 22f9121865fc048a8a03d32ea9381f62 330 Gene3D G3DSA:1.10.10.10 7 93 3.5E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_04820 22f9121865fc048a8a03d32ea9381f62 330 Pfam PF03466 LysR substrate binding domain 98 284 1.4E-25 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_04820 22f9121865fc048a8a03d32ea9381f62 330 Gene3D G3DSA:3.40.190.10 169 262 6.2E-53 T 01-11-2018 D3790_16945 f6de7b053083fade0fd884286987aef3 188 SUPERFAMILY SSF50891 25 186 3.07E-59 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily D3790_16945 f6de7b053083fade0fd884286987aef3 188 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 68 80 8.2E-12 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D3790_16945 f6de7b053083fade0fd884286987aef3 188 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 142 157 8.2E-12 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D3790_16945 f6de7b053083fade0fd884286987aef3 188 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 57 8.2E-12 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D3790_16945 f6de7b053083fade0fd884286987aef3 188 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 63 80 - T 01-11-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 D3790_16945 f6de7b053083fade0fd884286987aef3 188 Gene3D G3DSA:2.40.100.10 24 188 3.8E-71 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily D3790_16945 f6de7b053083fade0fd884286987aef3 188 PIRSF PIRSF001467 14 185 6.9E-30 T 01-11-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 D3790_16945 f6de7b053083fade0fd884286987aef3 188 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 29 185 3.8E-50 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D3790_03680 9c83622f8e4ac3e218eae7ecd491b57d 403 SUPERFAMILY SSF52777 173 402 7.12E-90 T 01-11-2018 D3790_03680 9c83622f8e4ac3e218eae7ecd491b57d 403 Pfam PF00364 Biotin-requiring enzyme 5 77 3.5E-19 T 01-11-2018 IPR000089 Biotin/lipoyl attachment D3790_03680 9c83622f8e4ac3e218eae7ecd491b57d 403 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 01-11-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 D3790_03680 9c83622f8e4ac3e218eae7ecd491b57d 403 SUPERFAMILY SSF47005 106 150 5.75E-11 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 D3790_03680 9c83622f8e4ac3e218eae7ecd491b57d 403 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 173 401 2.8E-82 T 01-11-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 D3790_03680 9c83622f8e4ac3e218eae7ecd491b57d 403 Gene3D G3DSA:2.40.50.100 2 80 2.0E-23 T 01-11-2018 D3790_03680 9c83622f8e4ac3e218eae7ecd491b57d 403 Gene3D G3DSA:4.10.320.10 102 151 5.1E-22 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 D3790_03680 9c83622f8e4ac3e218eae7ecd491b57d 403 SUPERFAMILY SSF51230 2 87 1.18E-24 T 01-11-2018 IPR011053 Single hybrid motif D3790_03680 9c83622f8e4ac3e218eae7ecd491b57d 403 Pfam PF02817 e3 binding domain 113 146 9.8E-13 T 01-11-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 D3790_03680 9c83622f8e4ac3e218eae7ecd491b57d 403 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 403 8.2E-189 T 01-11-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 D3790_03680 9c83622f8e4ac3e218eae7ecd491b57d 403 Gene3D G3DSA:3.30.559.10 171 403 5.3E-98 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_11665 d16ebf36ddc5219a927fbe178234752d 321 SUPERFAMILY SSF103481 221 302 5.49E-16 T 01-11-2018 D3790_11665 d16ebf36ddc5219a927fbe178234752d 321 SUPERFAMILY SSF103481 43 145 3.79E-18 T 01-11-2018 D3790_11665 d16ebf36ddc5219a927fbe178234752d 321 Pfam PF00892 EamA-like transporter family 158 296 6.4E-26 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D3790_11665 d16ebf36ddc5219a927fbe178234752d 321 Pfam PF00892 EamA-like transporter family 15 143 8.8E-25 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D3790_11435 3fbcf383136a31f284cca42e5e54a023 117 Gene3D G3DSA:3.40.1260.10 2 117 1.1E-29 T 01-11-2018 IPR027396 DsrEFH-like D3790_11435 3fbcf383136a31f284cca42e5e54a023 117 Pfam PF02635 DsrE/DsrF-like family 3 117 3.8E-21 T 01-11-2018 IPR003787 Sulphur relay, DsrE/F-like protein D3790_11435 3fbcf383136a31f284cca42e5e54a023 117 SUPERFAMILY SSF75169 1 117 4.32E-31 T 01-11-2018 IPR027396 DsrEFH-like D3790_18885 ca7b50b8fd9cfb7c142130ecb14b403e 84 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 3 83 4.5E-38 T 01-11-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 D3790_18885 ca7b50b8fd9cfb7c142130ecb14b403e 84 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 8 84 4.0E-21 T 01-11-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 D3790_18885 ca7b50b8fd9cfb7c142130ecb14b403e 84 Gene3D G3DSA:1.10.1200.20 1 84 3.5E-33 T 01-11-2018 IPR035900 Colicin E immunity protein superfamily D3790_18885 ca7b50b8fd9cfb7c142130ecb14b403e 84 SUPERFAMILY SSF47345 3 84 6.93E-34 T 01-11-2018 IPR035900 Colicin E immunity protein superfamily D3790_18885 ca7b50b8fd9cfb7c142130ecb14b403e 84 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 62 83 5.7E-22 T 01-11-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 D3790_18885 ca7b50b8fd9cfb7c142130ecb14b403e 84 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 39 55 5.7E-22 T 01-11-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 D3790_18885 ca7b50b8fd9cfb7c142130ecb14b403e 84 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 3 21 5.7E-22 T 01-11-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 D3790_05240 d6ee1ddffc918eae5b1905fead486859 276 Gene3D G3DSA:3.40.50.1220 41 260 1.0E-82 T 01-11-2018 D3790_05240 d6ee1ddffc918eae5b1905fead486859 276 Gene3D G3DSA:3.30.1600.10 55 191 1.0E-82 T 01-11-2018 IPR026591 Sirtuin, catalytic core small domain superfamily D3790_05240 d6ee1ddffc918eae5b1905fead486859 276 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 39 269 58.728 T 01-11-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 D3790_05240 d6ee1ddffc918eae5b1905fead486859 276 Pfam PF02146 Sir2 family 46 219 5.9E-53 T 01-11-2018 IPR003000 Sirtuin family GO:0070403 D3790_05240 d6ee1ddffc918eae5b1905fead486859 276 SUPERFAMILY SSF52467 39 268 3.04E-76 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily D3790_12650 be2277fabeaf7a2d0fe7e3721b81271a 293 SMART SM00871 126 292 1.0E-6 T 01-11-2018 IPR010499 Bacterial transcription activator, effector binding D3790_12650 be2277fabeaf7a2d0fe7e3721b81271a 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 1.2E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D3790_12650 be2277fabeaf7a2d0fe7e3721b81271a 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 1.2E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D3790_12650 be2277fabeaf7a2d0fe7e3721b81271a 293 Gene3D G3DSA:3.20.80.10 123 293 3.4E-36 T 01-11-2018 IPR011256 Regulatory factor, effector binding domain superfamily D3790_12650 be2277fabeaf7a2d0fe7e3721b81271a 293 SUPERFAMILY SSF46689 5 55 8.98E-11 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_12650 be2277fabeaf7a2d0fe7e3721b81271a 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 D3790_12650 be2277fabeaf7a2d0fe7e3721b81271a 293 Pfam PF14526 Integron-associated effector binding protein 131 291 1.2E-11 T 01-11-2018 IPR029441 Integron-associated effector binding protein D3790_12650 be2277fabeaf7a2d0fe7e3721b81271a 293 SUPERFAMILY SSF55136 125 292 2.27E-32 T 01-11-2018 IPR011256 Regulatory factor, effector binding domain superfamily D3790_12650 be2277fabeaf7a2d0fe7e3721b81271a 293 SUPERFAMILY SSF46689 57 107 9.41E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_12650 be2277fabeaf7a2d0fe7e3721b81271a 293 Pfam PF12833 Helix-turn-helix domain 27 105 5.6E-20 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D3790_12650 be2277fabeaf7a2d0fe7e3721b81271a 293 Gene3D G3DSA:1.10.10.60 3 55 7.9E-26 T 01-11-2018 D3790_12650 be2277fabeaf7a2d0fe7e3721b81271a 293 Gene3D G3DSA:1.10.10.60 56 121 1.8E-20 T 01-11-2018 D3790_12650 be2277fabeaf7a2d0fe7e3721b81271a 293 SMART SM00342 21 104 2.6E-30 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D3790_15260 5926b5c33c2e9cfac2be4d4f2a7827b4 843 Gene3D G3DSA:1.10.3810.10 49 242 2.1E-79 T 01-11-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_15260 5926b5c33c2e9cfac2be4d4f2a7827b4 843 Pfam PF00912 Transglycosylase 56 229 8.4E-65 T 01-11-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_15260 5926b5c33c2e9cfac2be4d4f2a7827b4 843 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 66 778 1.6E-171 T 01-11-2018 D3790_15260 5926b5c33c2e9cfac2be4d4f2a7827b4 843 Pfam PF00905 Penicillin binding protein transpeptidase domain 428 603 2.4E-21 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 D3790_15260 5926b5c33c2e9cfac2be4d4f2a7827b4 843 SUPERFAMILY SSF56601 211 826 9.01E-111 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like D3790_15260 5926b5c33c2e9cfac2be4d4f2a7827b4 843 Pfam PF17092 Penicillin-binding protein OB-like domain 316 425 1.2E-26 T 01-11-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_15260 5926b5c33c2e9cfac2be4d4f2a7827b4 843 SUPERFAMILY SSF53955 43 257 1.66E-80 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily D3790_15260 5926b5c33c2e9cfac2be4d4f2a7827b4 843 Gene3D G3DSA:2.40.50.140 316 422 6.3E-27 T 01-11-2018 D3790_18725 41d86df6777e1b93813ebb4239e19876 822 PIRSF PIRSF000437 19 818 0.0 T 01-11-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 D3790_18725 41d86df6777e1b93813ebb4239e19876 822 PIRSF PIRSF500064 2 819 0.0 T 01-11-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 D3790_18725 41d86df6777e1b93813ebb4239e19876 822 SUPERFAMILY SSF69593 274 490 3.14E-24 T 01-11-2018 D3790_18725 41d86df6777e1b93813ebb4239e19876 822 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 810 32.282 T 01-11-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 D3790_18725 41d86df6777e1b93813ebb4239e19876 822 Pfam PF01553 Acyltransferase 284 426 1.7E-26 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D3790_18725 41d86df6777e1b93813ebb4239e19876 822 SMART SM00563 302 429 8.3E-29 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D3790_18725 41d86df6777e1b93813ebb4239e19876 822 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 802 0.0 T 01-11-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 D3790_02475 1124dff4a163d9190bb2c98c856ef21a 350 Gene3D G3DSA:1.10.390.10 181 349 1.4E-53 T 01-11-2018 IPR027268 Peptidase M4/M1, CTD superfamily D3790_02475 1124dff4a163d9190bb2c98c856ef21a 350 Gene3D G3DSA:3.10.170.10 4 180 3.4E-60 T 01-11-2018 D3790_02475 1124dff4a163d9190bb2c98c856ef21a 350 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 167 183 2.9E-24 T 01-11-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 D3790_02475 1124dff4a163d9190bb2c98c856ef21a 350 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 131 151 2.9E-24 T 01-11-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 D3790_02475 1124dff4a163d9190bb2c98c856ef21a 350 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 271 287 2.9E-24 T 01-11-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 D3790_02475 1124dff4a163d9190bb2c98c856ef21a 350 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 188 199 2.9E-24 T 01-11-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 D3790_02475 1124dff4a163d9190bb2c98c856ef21a 350 Pfam PF16485 Protealysin propeptide 9 45 5.4E-11 T 01-11-2018 IPR032475 Protealysin, N-terminal propeptide D3790_02475 1124dff4a163d9190bb2c98c856ef21a 350 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 179 348 4.7E-44 T 01-11-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 D3790_02475 1124dff4a163d9190bb2c98c856ef21a 350 SUPERFAMILY SSF55486 63 348 4.4E-74 T 01-11-2018 D3790_02475 1124dff4a163d9190bb2c98c856ef21a 350 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 67 176 8.7E-34 T 01-11-2018 IPR013856 Peptidase M4 domain GO:0004222 D3790_11015 d7466f8995aab3132cd72ec5f6406884 575 Gene3D G3DSA:3.40.50.1220 190 360 2.9E-60 T 01-11-2018 D3790_11015 d7466f8995aab3132cd72ec5f6406884 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 546 2.2E-50 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 D3790_11015 d7466f8995aab3132cd72ec5f6406884 575 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 01-11-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 D3790_11015 d7466f8995aab3132cd72ec5f6406884 575 Gene3D G3DSA:3.40.50.970 364 567 2.8E-66 T 01-11-2018 D3790_11015 d7466f8995aab3132cd72ec5f6406884 575 SUPERFAMILY SSF52467 189 362 3.27E-61 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily D3790_11015 d7466f8995aab3132cd72ec5f6406884 575 SUPERFAMILY SSF52518 371 569 2.14E-67 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_11015 d7466f8995aab3132cd72ec5f6406884 575 SUPERFAMILY SSF52518 2 181 3.62E-66 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_11015 d7466f8995aab3132cd72ec5f6406884 575 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 570 6.2E-273 T 01-11-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 D3790_11015 d7466f8995aab3132cd72ec5f6406884 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 168 1.5E-59 T 01-11-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 D3790_11015 d7466f8995aab3132cd72ec5f6406884 575 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 6.1E-46 T 01-11-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 D3790_11015 d7466f8995aab3132cd72ec5f6406884 575 Gene3D G3DSA:3.40.50.970 1 175 3.2E-72 T 01-11-2018 D3790_00745 020b09d3c4a449c0febc4a32f98c3437 687 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 652 0.0 T 01-11-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 D3790_00745 020b09d3c4a449c0febc4a32f98c3437 687 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 180 225 1.1E-4 T 01-11-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain D3790_00745 020b09d3c4a449c0febc4a32f98c3437 687 Gene3D G3DSA:3.40.50.300 422 655 3.1E-26 T 01-11-2018 D3790_00745 020b09d3c4a449c0febc4a32f98c3437 687 Gene3D G3DSA:3.40.50.300 143 255 9.3E-11 T 01-11-2018 D3790_00745 020b09d3c4a449c0febc4a32f98c3437 687 SUPERFAMILY SSF52540 142 651 1.41E-52 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_00745 020b09d3c4a449c0febc4a32f98c3437 687 Pfam PF12696 TraM recognition site of TraD and TraG 505 631 7.0E-11 T 01-11-2018 IPR032689 TraD/TraG, TraM recognition site D3790_00745 020b09d3c4a449c0febc4a32f98c3437 687 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 652 1.0E-264 T 01-11-2018 IPR022458 Conjugative coupling factor TraG/TraD D3790_14215 6c0cc79eecec776af385a8edc95c8645 63 Gene3D G3DSA:1.10.287.310 1 63 3.3E-30 T 01-11-2018 D3790_14215 6c0cc79eecec776af385a8edc95c8645 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.624 T 01-11-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14215 6c0cc79eecec776af385a8edc95c8645 63 Pfam PF00831 Ribosomal L29 protein 4 60 8.3E-23 T 01-11-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14215 6c0cc79eecec776af385a8edc95c8645 63 SUPERFAMILY SSF46561 1 61 9.29E-22 T 01-11-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14215 6c0cc79eecec776af385a8edc95c8645 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 2.0E-22 T 01-11-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14215 6c0cc79eecec776af385a8edc95c8645 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 01-11-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_15675 94568f3e859550af6c41e6ed29584970 447 Pfam PF14535 AMP-binding enzyme C-terminal domain 349 444 1.3E-25 T 01-11-2018 IPR028154 AMP-dependent ligase, C-terminal D3790_15675 94568f3e859550af6c41e6ed29584970 447 Gene3D G3DSA:3.40.50.12780 11 342 1.8E-131 T 01-11-2018 D3790_15675 94568f3e859550af6c41e6ed29584970 447 SUPERFAMILY SSF56801 10 407 7.2E-62 T 01-11-2018 D3790_15675 94568f3e859550af6c41e6ed29584970 447 Pfam PF00501 AMP-binding enzyme 92 303 3.1E-15 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_15675 94568f3e859550af6c41e6ed29584970 447 Gene3D G3DSA:3.30.300.30 343 445 2.3E-30 T 01-11-2018 D3790_15675 94568f3e859550af6c41e6ed29584970 447 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 24 444 3.1E-213 T 01-11-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 D3790_15675 94568f3e859550af6c41e6ed29584970 447 PIRSF PIRSF006444 12 446 2.5E-200 T 01-11-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 D3790_09705 50b7f9f856b80b90c335056c439be73b 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 1.0E-59 T 01-11-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 D3790_09705 50b7f9f856b80b90c335056c439be73b 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.385 T 01-11-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 D3790_09705 50b7f9f856b80b90c335056c439be73b 149 Pfam PF06303 MatP N-terminal domain 2 85 3.8E-45 T 01-11-2018 IPR035087 MatP, N-terminal D3790_09705 50b7f9f856b80b90c335056c439be73b 149 Gene3D G3DSA:1.20.1270.380 1 89 3.0E-47 T 01-11-2018 IPR038339 MatP, N-terminal domain superfamily D3790_09705 50b7f9f856b80b90c335056c439be73b 149 Gene3D G3DSA:1.10.1220.10 98 149 1.1E-27 T 01-11-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 D3790_09705 50b7f9f856b80b90c335056c439be73b 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 1.8E-29 T 01-11-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain D3790_09640 73603f40529cb7ca662c6eae158c5838 143 Pfam PF00583 Acetyltransferase (GNAT) family 31 132 1.5E-8 T 01-11-2018 IPR000182 GNAT domain D3790_09640 73603f40529cb7ca662c6eae158c5838 143 Gene3D G3DSA:3.40.630.30 5 143 1.0E-13 T 01-11-2018 D3790_09640 73603f40529cb7ca662c6eae158c5838 143 SUPERFAMILY SSF55729 1 129 1.72E-14 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_05715 b3ec6252f2f6080d3e9da4c9c583670d 352 Gene3D G3DSA:3.40.10.10 1 72 9.3E-27 T 01-11-2018 IPR035451 Ada-like domain superfamily D3790_05715 b3ec6252f2f6080d3e9da4c9c583670d 352 SUPERFAMILY SSF57884 3 71 5.89E-26 T 01-11-2018 IPR035451 Ada-like domain superfamily D3790_05715 b3ec6252f2f6080d3e9da4c9c583670d 352 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 318 324 - T 01-11-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 D3790_05715 b3ec6252f2f6080d3e9da4c9c583670d 352 Pfam PF12833 Helix-turn-helix domain 104 181 1.5E-17 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D3790_05715 b3ec6252f2f6080d3e9da4c9c583670d 352 Gene3D G3DSA:1.10.10.10 267 352 1.6E-32 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_05715 b3ec6252f2f6080d3e9da4c9c583670d 352 SUPERFAMILY SSF46767 267 347 4.58E-27 T 01-11-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 D3790_05715 b3ec6252f2f6080d3e9da4c9c583670d 352 Gene3D G3DSA:3.30.160.70 179 266 1.4E-30 T 01-11-2018 D3790_05715 b3ec6252f2f6080d3e9da4c9c583670d 352 SUPERFAMILY SSF53155 186 266 5.89E-20 T 01-11-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 D3790_05715 b3ec6252f2f6080d3e9da4c9c583670d 352 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 197 265 3.2E-4 T 01-11-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 D3790_05715 b3ec6252f2f6080d3e9da4c9c583670d 352 Pfam PF02805 Metal binding domain of Ada 8 70 9.1E-27 T 01-11-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 D3790_05715 b3ec6252f2f6080d3e9da4c9c583670d 352 SUPERFAMILY SSF46689 84 131 1.09E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_05715 b3ec6252f2f6080d3e9da4c9c583670d 352 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 270 347 4.3E-29 T 01-11-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 D3790_05715 b3ec6252f2f6080d3e9da4c9c583670d 352 Gene3D G3DSA:1.10.10.60 135 178 2.8E-5 T 01-11-2018 D3790_05715 b3ec6252f2f6080d3e9da4c9c583670d 352 PIRSF PIRSF000409 1 352 7.5E-135 T 01-11-2018 IPR016221 Bifunctional regulatory protein Ada D3790_05715 b3ec6252f2f6080d3e9da4c9c583670d 352 Gene3D G3DSA:1.10.10.60 76 134 1.5E-23 T 01-11-2018 D3790_05715 b3ec6252f2f6080d3e9da4c9c583670d 352 SMART SM00342 98 180 6.7E-19 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D3790_05715 b3ec6252f2f6080d3e9da4c9c583670d 352 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 268 347 6.1E-32 T 01-11-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 D3790_04325 7ef54de833ce969aee9863109cde048e 725 Gene3D G3DSA:3.90.226.10 15 314 2.5E-95 T 01-11-2018 D3790_04325 7ef54de833ce969aee9863109cde048e 725 Gene3D G3DSA:3.40.50.720 315 507 1.6E-60 T 01-11-2018 D3790_04325 7ef54de833ce969aee9863109cde048e 725 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 323 502 1.1E-56 T 01-11-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D3790_04325 7ef54de833ce969aee9863109cde048e 725 SUPERFAMILY SSF48179 505 603 1.11E-25 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D3790_04325 7ef54de833ce969aee9863109cde048e 725 Gene3D G3DSA:1.10.1040.50 508 719 1.6E-65 T 01-11-2018 D3790_04325 7ef54de833ce969aee9863109cde048e 725 SUPERFAMILY SSF48179 631 724 5.61E-27 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D3790_04325 7ef54de833ce969aee9863109cde048e 725 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 502 527 - T 01-11-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D3790_04325 7ef54de833ce969aee9863109cde048e 725 Pfam PF00378 Enoyl-CoA hydratase/isomerase 27 221 2.8E-42 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 D3790_04325 7ef54de833ce969aee9863109cde048e 725 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 636 721 3.6E-6 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D3790_04325 7ef54de833ce969aee9863109cde048e 725 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 505 598 5.2E-22 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D3790_04325 7ef54de833ce969aee9863109cde048e 725 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 20 724 0.0 T 01-11-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D3790_04325 7ef54de833ce969aee9863109cde048e 725 SUPERFAMILY SSF51735 320 502 1.01E-50 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_04325 7ef54de833ce969aee9863109cde048e 725 SUPERFAMILY SSF52096 19 312 1.9E-66 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily D3790_04325 7ef54de833ce969aee9863109cde048e 725 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 118 138 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 D3790_03515 b96a90301e8ab7844b545ae1c04b431d 709 Pfam PF03412 Peptidase C39 family 17 122 7.0E-6 T 01-11-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 D3790_03515 b96a90301e8ab7844b545ae1c04b431d 709 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 20 708 0.0 T 01-11-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 D3790_03515 b96a90301e8ab7844b545ae1c04b431d 709 Gene3D G3DSA:3.40.50.300 465 709 7.9E-87 T 01-11-2018 D3790_03515 b96a90301e8ab7844b545ae1c04b431d 709 SUPERFAMILY SSF52540 463 707 4.33E-86 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_03515 b96a90301e8ab7844b545ae1c04b431d 709 Pfam PF00664 ABC transporter transmembrane region 159 425 3.5E-44 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D3790_03515 b96a90301e8ab7844b545ae1c04b431d 709 Gene3D G3DSA:1.20.1560.10 144 457 4.0E-70 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_03515 b96a90301e8ab7844b545ae1c04b431d 709 ProSitePatterns PS00211 ABC transporters family signature. 609 623 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_03515 b96a90301e8ab7844b545ae1c04b431d 709 Pfam PF00005 ABC transporter 488 637 8.5E-34 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_03515 b96a90301e8ab7844b545ae1c04b431d 709 SMART SM00382 497 683 1.7E-20 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_03515 b96a90301e8ab7844b545ae1c04b431d 709 Gene3D G3DSA:3.90.70.10 16 122 7.2E-10 T 01-11-2018 D3790_03515 b96a90301e8ab7844b545ae1c04b431d 709 SUPERFAMILY SSF90123 144 455 2.35E-63 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_11035 dead7abe770aba346c5639f878d31324 539 SUPERFAMILY SSF51569 1 291 5.68E-98 T 01-11-2018 D3790_11035 dead7abe770aba346c5639f878d31324 539 Pfam PF00682 HMGL-like 4 273 9.1E-102 T 01-11-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 D3790_11035 dead7abe770aba346c5639f878d31324 539 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 42.666 T 01-11-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D3790_11035 dead7abe770aba346c5639f878d31324 539 Gene3D G3DSA:3.20.20.70 1 277 5.4E-107 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_11035 dead7abe770aba346c5639f878d31324 539 Gene3D G3DSA:3.30.160.270 393 500 1.9E-6 T 01-11-2018 D3790_11035 dead7abe770aba346c5639f878d31324 539 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 01-11-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D3790_11035 dead7abe770aba346c5639f878d31324 539 SUPERFAMILY SSF110921 391 499 9.68E-22 T 01-11-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D3790_11035 dead7abe770aba346c5639f878d31324 539 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 7.1E-32 T 01-11-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D3790_11035 dead7abe770aba346c5639f878d31324 539 Gene3D G3DSA:1.10.238.260 280 392 3.0E-33 T 01-11-2018 D3790_11035 dead7abe770aba346c5639f878d31324 539 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 01-11-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D3790_11035 dead7abe770aba346c5639f878d31324 539 SMART SM00917 369 500 2.8E-35 T 01-11-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D3790_11035 dead7abe770aba346c5639f878d31324 539 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 4.6E-243 T 01-11-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D3790_18530 4b9dc38893b1157f28d1505e661f01f4 343 SUPERFAMILY SSF52540 1 240 3.34E-84 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_18530 4b9dc38893b1157f28d1505e661f01f4 343 Pfam PF09383 NIL domain 268 339 8.0E-21 T 01-11-2018 IPR018449 NIL domain D3790_18530 4b9dc38893b1157f28d1505e661f01f4 343 Gene3D G3DSA:3.30.70.260 233 343 3.6E-37 T 01-11-2018 D3790_18530 4b9dc38893b1157f28d1505e661f01f4 343 SMART SM00382 30 217 7.5E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_18530 4b9dc38893b1157f28d1505e661f01f4 343 Pfam PF00005 ABC transporter 21 169 3.0E-35 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_18530 4b9dc38893b1157f28d1505e661f01f4 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 6.4E-192 T 01-11-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 D3790_18530 4b9dc38893b1157f28d1505e661f01f4 343 SMART SM00930 265 340 9.8E-26 T 01-11-2018 IPR018449 NIL domain D3790_18530 4b9dc38893b1157f28d1505e661f01f4 343 SUPERFAMILY SSF55021 248 343 8.47E-25 T 01-11-2018 D3790_18530 4b9dc38893b1157f28d1505e661f01f4 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_18530 4b9dc38893b1157f28d1505e661f01f4 343 Gene3D G3DSA:3.40.50.300 1 232 3.3E-75 T 01-11-2018 D3790_13630 a099e664763861ad65122f840f66ced1 477 SUPERFAMILY SSF56645 1 269 9.95E-69 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 D3790_13630 a099e664763861ad65122f840f66ced1 477 Gene3D G3DSA:1.10.3140.10 1 140 7.8E-42 T 01-11-2018 D3790_13630 a099e664763861ad65122f840f66ced1 477 SUPERFAMILY SSF47203 260 474 3.98E-48 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 D3790_13630 a099e664763861ad65122f840f66ced1 477 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 280 474 6.1E-55 T 01-11-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal D3790_13630 a099e664763861ad65122f840f66ced1 477 Gene3D G3DSA:1.20.140.10 272 476 4.3E-56 T 01-11-2018 D3790_13630 a099e664763861ad65122f840f66ced1 477 PIRSF PIRSF000331 1 477 3.6E-130 T 01-11-2018 IPR004925 HpaB/PvcC/4-BUDH D3790_13630 a099e664763861ad65122f840f66ced1 477 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 4 269 3.9E-88 T 01-11-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal D3790_13630 a099e664763861ad65122f840f66ced1 477 Gene3D G3DSA:2.40.110.10 142 270 3.1E-42 T 01-11-2018 D3790_12635 5a20df67e013bb03b11a55b66be0abcf 238 Pfam PF00072 Response regulator receiver domain 6 113 1.2E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_12635 5a20df67e013bb03b11a55b66be0abcf 238 SUPERFAMILY SSF46894 137 233 1.28E-19 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D3790_12635 5a20df67e013bb03b11a55b66be0abcf 238 Gene3D G3DSA:1.10.10.10 123 236 2.7E-25 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_12635 5a20df67e013bb03b11a55b66be0abcf 238 SUPERFAMILY SSF52172 2 127 1.02E-35 T 01-11-2018 IPR011006 CheY-like superfamily D3790_12635 5a20df67e013bb03b11a55b66be0abcf 238 SMART SM00448 4 114 2.9E-37 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_12635 5a20df67e013bb03b11a55b66be0abcf 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 4.3E-17 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D3790_12635 5a20df67e013bb03b11a55b66be0abcf 238 Gene3D G3DSA:3.40.50.2300 1 122 2.0E-32 T 01-11-2018 D3790_12635 5a20df67e013bb03b11a55b66be0abcf 238 SMART SM00862 156 232 3.0E-13 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D3790_06765 e658bcdec25ff850e6ed1531dd2c79bd 192 SUPERFAMILY SSF46689 5 72 2.52E-15 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_06765 e658bcdec25ff850e6ed1531dd2c79bd 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 1.9E-14 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D3790_06765 e658bcdec25ff850e6ed1531dd2c79bd 192 Gene3D G3DSA:1.10.357.10 2 189 8.5E-51 T 01-11-2018 D3790_06765 e658bcdec25ff850e6ed1531dd2c79bd 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.2E-6 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D3790_06765 e658bcdec25ff850e6ed1531dd2c79bd 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.2E-6 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D3790_06765 e658bcdec25ff850e6ed1531dd2c79bd 192 SUPERFAMILY SSF48498 79 185 8.9E-18 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D3790_05500 efb61380e616744f5f7902641845ae9c 150 Pfam PF04284 Protein of unknown function (DUF441) 9 147 3.1E-47 T 01-11-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame D3790_05500 efb61380e616744f5f7902641845ae9c 150 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 5 132 1.0E-47 T 01-11-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame D3790_05500 efb61380e616744f5f7902641845ae9c 150 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 5 150 18.607 T 01-11-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame D3790_01015 f4138f3391604c25f63279d248bd7f42 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 1.6E-104 T 01-11-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 D3790_01015 f4138f3391604c25f63279d248bd7f42 198 PIRSF PIRSF006102 1 198 7.0E-66 T 01-11-2018 IPR003667 NqrDE/RnfAE GO:0016020 D3790_01015 f4138f3391604c25f63279d248bd7f42 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 6.8E-60 T 01-11-2018 IPR003667 NqrDE/RnfAE GO:0016020 D3790_01015 f4138f3391604c25f63279d248bd7f42 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.585 T 01-11-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 D3790_07525 8b2f20f9b829861239615ce134adea8c 334 SUPERFAMILY SSF51735 120 296 8.65E-50 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_07525 8b2f20f9b829861239615ce134adea8c 334 SMART SM00829 19 332 6.9E-57 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 D3790_07525 8b2f20f9b829861239615ce134adea8c 334 SUPERFAMILY SSF50129 10 149 2.04E-39 T 01-11-2018 IPR011032 GroES-like superfamily D3790_07525 8b2f20f9b829861239615ce134adea8c 334 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 10 333 6.2E-149 T 01-11-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 D3790_07525 8b2f20f9b829861239615ce134adea8c 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 36 114 1.7E-11 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 D3790_07525 8b2f20f9b829861239615ce134adea8c 334 Pfam PF00107 Zinc-binding dehydrogenase 160 275 7.8E-26 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 D3790_07525 8b2f20f9b829861239615ce134adea8c 334 Gene3D G3DSA:3.90.180.10 22 332 5.7E-107 T 01-11-2018 D3790_07525 8b2f20f9b829861239615ce134adea8c 334 Gene3D G3DSA:3.40.50.720 129 271 5.7E-107 T 01-11-2018 D3790_06865 eb1918c2002764284a0ce01281868646 273 SUPERFAMILY SSF49482 25 224 2.09E-42 T 01-11-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 D3790_06865 eb1918c2002764284a0ce01281868646 273 Gene3D G3DSA:2.60.130.10 26 224 4.9E-46 T 01-11-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 D3790_06865 eb1918c2002764284a0ce01281868646 273 Pfam PF00775 Dioxygenase 57 197 1.1E-7 T 01-11-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 D3790_02385 3b890da0cdd847ba96e3906ec329fe1e 431 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 01-11-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 D3790_02385 3b890da0cdd847ba96e3906ec329fe1e 431 PIRSF PIRSF036388 2 431 5.0E-224 T 01-11-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 D3790_02385 3b890da0cdd847ba96e3906ec329fe1e 431 Pfam PF12404 Peptidase 6 82 1.7E-31 T 01-11-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 D3790_02385 3b890da0cdd847ba96e3906ec329fe1e 431 SUPERFAMILY SSF53187 107 427 1.0E-102 T 01-11-2018 D3790_02385 3b890da0cdd847ba96e3906ec329fe1e 431 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 3.8E-45 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D3790_02385 3b890da0cdd847ba96e3906ec329fe1e 431 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 3.8E-45 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D3790_02385 3b890da0cdd847ba96e3906ec329fe1e 431 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 3.8E-45 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D3790_02385 3b890da0cdd847ba96e3906ec329fe1e 431 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 3.8E-45 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D3790_02385 3b890da0cdd847ba96e3906ec329fe1e 431 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 3.8E-45 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D3790_02385 3b890da0cdd847ba96e3906ec329fe1e 431 Gene3D G3DSA:3.40.630.10 96 430 9.4E-106 T 01-11-2018 D3790_02385 3b890da0cdd847ba96e3906ec329fe1e 431 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 110 422 3.3E-104 T 01-11-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 Gene3D G3DSA:3.30.300.30 935 1018 2.3E-11 T 01-11-2018 D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 ProSitePatterns PS00455 Putative AMP-binding domain signature. 693 704 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 567 965 1.4E-124 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 Pfam PF13847 Methyltransferase domain 1064 1184 1.4E-11 T 01-11-2018 IPR025714 Methyltransferase domain D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 SUPERFAMILY SSF47336 1454 1527 1.3E-20 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 SUPERFAMILY SSF53335 1032 1179 1.35E-25 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 Gene3D G3DSA:3.30.559.10 74 442 3.7E-143 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 Gene3D G3DSA:3.30.300.30 1359 1451 6.8E-12 T 01-11-2018 D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 SUPERFAMILY SSF56801 508 1475 1.28E-150 T 01-11-2018 D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 SMART SM00823 Phosphopantetheine attachment site 1462 1531 0.0074 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 Pfam PF00501 AMP-binding enzyme 546 941 3.4E-101 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 SUPERFAMILY SSF52777 260 502 3.34E-62 T 01-11-2018 D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 Gene3D G3DSA:3.40.50.150 1035 1219 5.8E-30 T 01-11-2018 D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 Gene3D G3DSA:3.30.559.30 256 500 3.7E-143 T 01-11-2018 D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 Gene3D G3DSA:3.40.50.12780 540 934 1.3E-129 T 01-11-2018 D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 Pfam PF00668 Condensation domain 70 501 7.4E-104 T 01-11-2018 IPR001242 Condensation domain D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 Gene3D G3DSA:1.10.1200.10 1452 1531 2.6E-28 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1486 1501 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 SUPERFAMILY SSF52777 75 252 7.89E-48 T 01-11-2018 D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 Gene3D G3DSA:1.10.10.1830 3 57 1.0E-6 T 01-11-2018 D3790_07095 1552f0a86aa8d9b42b02561fd0ea9ba6 1554 Pfam PF00550 Phosphopantetheine attachment site 1464 1525 8.4E-15 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_18500 43d1f2828bb0871c472605dc4d46fde6 233 Gene3D G3DSA:2.40.50.540 143 231 3.3E-23 T 01-11-2018 IPR038139 NlpE, C-terminal domain superfamily D3790_18500 43d1f2828bb0871c472605dc4d46fde6 233 Gene3D G3DSA:2.40.128.300 26 122 4.4E-25 T 01-11-2018 D3790_18500 43d1f2828bb0871c472605dc4d46fde6 233 Pfam PF04170 NlpE N-terminal domain 49 134 2.3E-25 T 01-11-2018 IPR007298 Copper resistance lipoprotein NlpE D3790_18500 43d1f2828bb0871c472605dc4d46fde6 233 Pfam PF17185 NlpE C-terminal OB domain 142 230 9.5E-32 T 01-11-2018 IPR033450 NlpE, C-terminal OB domain D3790_06620 53fa31344b720b9e2de3e79f6ba44d37 239 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 208 5.3E-84 T 01-11-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 D3790_06620 53fa31344b720b9e2de3e79f6ba44d37 239 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 28.119 T 01-11-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 D3790_06620 53fa31344b720b9e2de3e79f6ba44d37 239 PIRSF PIRSF006102 1 219 5.2E-78 T 01-11-2018 IPR003667 NqrDE/RnfAE GO:0016020 D3790_06620 53fa31344b720b9e2de3e79f6ba44d37 239 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 199 3.8E-64 T 01-11-2018 IPR003667 NqrDE/RnfAE GO:0016020 D3790_12400 e7d85d75a3cc49703689403599138666 327 SUPERFAMILY SSF51395 11 319 2.01E-86 T 01-11-2018 D3790_12400 e7d85d75a3cc49703689403599138666 327 PIRSF PIRSF006621 1 327 2.1E-102 T 01-11-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 D3790_12400 e7d85d75a3cc49703689403599138666 327 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.081 T 01-11-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 D3790_12400 e7d85d75a3cc49703689403599138666 327 Gene3D G3DSA:1.10.1200.80 253 326 7.3E-10 T 01-11-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 D3790_12400 e7d85d75a3cc49703689403599138666 327 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 01-11-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 D3790_12400 e7d85d75a3cc49703689403599138666 327 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 4.0E-115 T 01-11-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 D3790_12400 e7d85d75a3cc49703689403599138666 327 Gene3D G3DSA:3.20.20.70 7 248 5.9E-76 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_12400 e7d85d75a3cc49703689403599138666 327 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 1.9E-138 T 01-11-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 D3790_10630 bbb3dd4c0b604105ed4386d381543ac0 145 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 21 143 4.0E-20 T 01-11-2018 IPR009883 Inner membrane protein YgfX D3790_10630 bbb3dd4c0b604105ed4386d381543ac0 145 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 139 1.2E-35 T 01-11-2018 IPR009883 Inner membrane protein YgfX D3790_07640 1ec8c9ee58eb3f62c4b45a34a8d17804 312 Gene3D G3DSA:3.40.50.2020 145 287 2.9E-137 T 01-11-2018 D3790_07640 1ec8c9ee58eb3f62c4b45a34a8d17804 312 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 311 4.5E-127 T 01-11-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 D3790_07640 1ec8c9ee58eb3f62c4b45a34a8d17804 312 Gene3D G3DSA:3.40.50.2020 4 299 2.9E-137 T 01-11-2018 D3790_07640 1ec8c9ee58eb3f62c4b45a34a8d17804 312 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 1 311 50.001 T 01-11-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 D3790_07640 1ec8c9ee58eb3f62c4b45a34a8d17804 312 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 126 141 - T 01-11-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 D3790_07640 1ec8c9ee58eb3f62c4b45a34a8d17804 312 SMART SM01400 1 118 1.7E-76 T 01-11-2018 D3790_07640 1ec8c9ee58eb3f62c4b45a34a8d17804 312 SUPERFAMILY SSF53271 66 303 1.16E-67 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like D3790_07640 1ec8c9ee58eb3f62c4b45a34a8d17804 312 Pfam PF14572 Phosphoribosyl synthetase-associated domain 201 310 1.6E-30 T 01-11-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 D3790_07640 1ec8c9ee58eb3f62c4b45a34a8d17804 312 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 118 1.5E-49 T 01-11-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 D3790_07895 5201672ea9303d4a93e0e502c5dc3141 185 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 55 63 - T 01-11-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 D3790_07895 5201672ea9303d4a93e0e502c5dc3141 185 Pfam PF13505 Outer membrane protein beta-barrel domain 8 185 4.5E-24 T 01-11-2018 IPR027385 Outer membrane protein beta-barrel D3790_07895 5201672ea9303d4a93e0e502c5dc3141 185 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 54 66 3.8E-30 T 01-11-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 D3790_07895 5201672ea9303d4a93e0e502c5dc3141 185 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 146 167 3.8E-30 T 01-11-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 D3790_07895 5201672ea9303d4a93e0e502c5dc3141 185 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 173 184 3.8E-30 T 01-11-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 D3790_07895 5201672ea9303d4a93e0e502c5dc3141 185 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 101 124 3.8E-30 T 01-11-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 D3790_07895 5201672ea9303d4a93e0e502c5dc3141 185 SUPERFAMILY SSF56925 27 185 1.86E-27 T 01-11-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D3790_07895 5201672ea9303d4a93e0e502c5dc3141 185 Gene3D G3DSA:2.40.160.20 23 185 2.4E-50 T 01-11-2018 D3790_12065 c7e259ff2e395faa5f661b5493d24fc1 392 Pfam PF02803 Thiolase, C-terminal domain 270 389 2.1E-41 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 D3790_12065 c7e259ff2e395faa5f661b5493d24fc1 392 Pfam PF00108 Thiolase, N-terminal domain 4 262 1.1E-100 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 D3790_12065 c7e259ff2e395faa5f661b5493d24fc1 392 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 01-11-2018 IPR020610 Thiolase, active site GO:0016747 D3790_12065 c7e259ff2e395faa5f661b5493d24fc1 392 PIRSF PIRSF000429 1 391 1.7E-121 T 01-11-2018 IPR002155 Thiolase GO:0016747 D3790_12065 c7e259ff2e395faa5f661b5493d24fc1 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 1.7E-137 T 01-11-2018 IPR002155 Thiolase GO:0016747 D3790_12065 c7e259ff2e395faa5f661b5493d24fc1 392 Gene3D G3DSA:3.40.47.10 6 275 2.7E-146 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_12065 c7e259ff2e395faa5f661b5493d24fc1 392 Gene3D G3DSA:3.40.47.10 126 388 2.7E-146 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_12065 c7e259ff2e395faa5f661b5493d24fc1 392 SUPERFAMILY SSF53901 3 269 6.63E-85 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_12065 c7e259ff2e395faa5f661b5493d24fc1 392 SUPERFAMILY SSF53901 270 389 1.42E-32 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_12065 c7e259ff2e395faa5f661b5493d24fc1 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 01-11-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 D3790_13485 99515c886156f240e933ad4fead48993 580 Gene3D G3DSA:3.10.20.310 190 269 6.4E-21 T 01-11-2018 D3790_13485 99515c886156f240e933ad4fead48993 580 Pfam PF17243 POTRA domain TamA domain 1 26 99 6.7E-18 T 01-11-2018 IPR035243 TamA, POTRA domain 1 D3790_13485 99515c886156f240e933ad4fead48993 580 Gene3D G3DSA:3.10.20.310 102 189 7.4E-31 T 01-11-2018 D3790_13485 99515c886156f240e933ad4fead48993 580 Gene3D G3DSA:3.10.20.310 21 101 2.4E-28 T 01-11-2018 D3790_13485 99515c886156f240e933ad4fead48993 580 Pfam PF01103 Surface antigen 270 578 8.5E-31 T 01-11-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 D3790_13485 99515c886156f240e933ad4fead48993 580 Pfam PF07244 Surface antigen variable number repeat 190 248 7.1E-6 T 01-11-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 D3790_13485 99515c886156f240e933ad4fead48993 580 Gene3D G3DSA:2.40.160.50 270 580 4.2E-114 T 01-11-2018 D3790_10360 c052a1b6c36babe040cef5e2f14e8f54 116 Gene3D G3DSA:3.10.450.40 4 115 5.6E-20 T 01-11-2018 D3790_10360 c052a1b6c36babe040cef5e2f14e8f54 116 Pfam PF04965 Gene 25-like lysozyme 17 100 1.1E-13 T 01-11-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD D3790_10360 c052a1b6c36babe040cef5e2f14e8f54 116 SUPERFAMILY SSF160719 11 113 2.88E-29 T 01-11-2018 D3790_12035 b68d37d5696859de2d1bd84557fc8d9b 343 Gene3D G3DSA:3.30.420.470 143 326 3.7E-10 T 01-11-2018 D3790_12035 b68d37d5696859de2d1bd84557fc8d9b 343 SUPERFAMILY SSF46689 18 137 7.35E-15 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_12035 b68d37d5696859de2d1bd84557fc8d9b 343 Pfam PF13565 Homeodomain-like domain 57 136 1.6E-12 T 01-11-2018 D3790_12035 b68d37d5696859de2d1bd84557fc8d9b 343 Pfam PF13358 DDE superfamily endonuclease 177 309 1.1E-22 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_12480 b68d37d5696859de2d1bd84557fc8d9b 343 Gene3D G3DSA:3.30.420.470 143 326 3.7E-10 T 01-11-2018 D3790_12480 b68d37d5696859de2d1bd84557fc8d9b 343 SUPERFAMILY SSF46689 18 137 7.35E-15 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_12480 b68d37d5696859de2d1bd84557fc8d9b 343 Pfam PF13565 Homeodomain-like domain 57 136 1.6E-12 T 01-11-2018 D3790_12480 b68d37d5696859de2d1bd84557fc8d9b 343 Pfam PF13358 DDE superfamily endonuclease 177 309 1.1E-22 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_17965 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 01-11-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_17965 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_17965 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_17965 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_17965 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_17965 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 6.3E-22 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_17965 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_17965 e0f63aa874b218a4c9d359851efe3e90 71 Gene3D G3DSA:1.20.5.1150 16 54 2.1E-21 T 01-11-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_17965 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_17965 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_02210 694edbd9b7958dab69470a94881eb52a 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 183 2.5E-29 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D3790_02210 694edbd9b7958dab69470a94881eb52a 191 SUPERFAMILY SSF88659 122 183 9.53E-18 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D3790_02210 694edbd9b7958dab69470a94881eb52a 191 Gene3D G3DSA:1.10.10.10 121 191 3.6E-22 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_02210 694edbd9b7958dab69470a94881eb52a 191 Pfam PF04542 Sigma-70 region 2 25 91 2.2E-15 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D3790_02210 694edbd9b7958dab69470a94881eb52a 191 Gene3D G3DSA:1.10.1740.10 1 120 2.2E-45 T 01-11-2018 D3790_02210 694edbd9b7958dab69470a94881eb52a 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 01-11-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D3790_02210 694edbd9b7958dab69470a94881eb52a 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 3.9E-98 T 01-11-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D3790_02210 694edbd9b7958dab69470a94881eb52a 191 Pfam PF08281 Sigma-70, region 4 133 180 3.1E-18 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D3790_02210 694edbd9b7958dab69470a94881eb52a 191 SUPERFAMILY SSF88946 2 106 3.14E-30 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D3790_15805 60dfe659698667db6d10de29ad31f70f 540 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 01-11-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 D3790_15805 60dfe659698667db6d10de29ad31f70f 540 Gene3D G3DSA:3.40.449.10 22 233 8.8E-237 T 01-11-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 D3790_15805 60dfe659698667db6d10de29ad31f70f 540 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 539 3.1E-282 T 01-11-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 D3790_15805 60dfe659698667db6d10de29ad31f70f 540 Gene3D G3DSA:3.90.228.20 234 524 8.8E-237 T 01-11-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 D3790_15805 60dfe659698667db6d10de29ad31f70f 540 PIRSF PIRSF006294 3 539 7.7E-230 T 01-11-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 D3790_15805 60dfe659698667db6d10de29ad31f70f 540 SUPERFAMILY SSF68923 8 226 2.27E-90 T 01-11-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 D3790_15805 60dfe659698667db6d10de29ad31f70f 540 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 490 3.4E-210 T 01-11-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 D3790_15805 60dfe659698667db6d10de29ad31f70f 540 Gene3D G3DSA:2.170.8.10 46 349 8.8E-237 T 01-11-2018 D3790_15805 60dfe659698667db6d10de29ad31f70f 540 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 15 537 55.336 T 01-11-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 D3790_15805 60dfe659698667db6d10de29ad31f70f 540 SUPERFAMILY SSF53795 228 539 1.79E-126 T 01-11-2018 D3790_08110 0aab8991c110ed202851dd687158dbcc 369 SUPERFAMILY SSF53067 5 340 8.29E-24 T 01-11-2018 D3790_08110 0aab8991c110ed202851dd687158dbcc 369 Gene3D G3DSA:3.30.420.40 145 327 2.0E-132 T 01-11-2018 D3790_08110 0aab8991c110ed202851dd687158dbcc 369 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 5 366 3.5E-165 T 01-11-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 D3790_08110 0aab8991c110ed202851dd687158dbcc 369 Gene3D G3DSA:3.30.420.40 11 362 2.0E-132 T 01-11-2018 D3790_08110 0aab8991c110ed202851dd687158dbcc 369 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 41.614 T 01-11-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 D3790_02470 1c771177d3df1d793ddb1cca27c14703 349 SUPERFAMILY SSF55486 64 347 4.88E-71 T 01-11-2018 D3790_02470 1c771177d3df1d793ddb1cca27c14703 349 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 178 347 1.0E-44 T 01-11-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 D3790_02470 1c771177d3df1d793ddb1cca27c14703 349 Gene3D G3DSA:3.10.170.10 3 179 2.9E-54 T 01-11-2018 D3790_02470 1c771177d3df1d793ddb1cca27c14703 349 Pfam PF16485 Protealysin propeptide 9 46 7.5E-7 T 01-11-2018 IPR032475 Protealysin, N-terminal propeptide D3790_02470 1c771177d3df1d793ddb1cca27c14703 349 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 27 175 3.2E-30 T 01-11-2018 IPR013856 Peptidase M4 domain GO:0004222 D3790_02470 1c771177d3df1d793ddb1cca27c14703 349 Gene3D G3DSA:1.10.390.10 180 348 2.5E-55 T 01-11-2018 IPR027268 Peptidase M4/M1, CTD superfamily D3790_02470 1c771177d3df1d793ddb1cca27c14703 349 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 270 286 3.9E-26 T 01-11-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 D3790_02470 1c771177d3df1d793ddb1cca27c14703 349 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 130 150 3.9E-26 T 01-11-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 D3790_02470 1c771177d3df1d793ddb1cca27c14703 349 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 166 182 3.9E-26 T 01-11-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 D3790_02470 1c771177d3df1d793ddb1cca27c14703 349 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 187 198 3.9E-26 T 01-11-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 D3790_13975 297900a81779aeebcfba37e125a238aa 199 Pfam PF02661 Fic/DOC family 51 161 3.5E-13 T 01-11-2018 IPR003812 Fido domain D3790_13975 297900a81779aeebcfba37e125a238aa 199 SUPERFAMILY SSF140931 39 170 5.23E-25 T 01-11-2018 IPR036597 Fido-like domain superfamily D3790_13975 297900a81779aeebcfba37e125a238aa 199 Gene3D G3DSA:1.10.3290.10 1 198 6.3E-38 T 01-11-2018 IPR036597 Fido-like domain superfamily D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 SUPERFAMILY SSF100920 383 534 4.97E-51 T 01-11-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 SUPERFAMILY SSF53067 200 376 3.0E-50 T 01-11-2018 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 PRINTS PR00301 70kDa heat shock protein signature 465 481 3.6E-55 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 PRINTS PR00301 70kDa heat shock protein signature 70 78 3.6E-55 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 PRINTS PR00301 70kDa heat shock protein signature 20 33 3.6E-55 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 PRINTS PR00301 70kDa heat shock protein signature 152 172 3.6E-55 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 PRINTS PR00301 70kDa heat shock protein signature 48 60 3.6E-55 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 PRINTS PR00301 70kDa heat shock protein signature 384 403 3.6E-55 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 PRINTS PR00301 70kDa heat shock protein signature 359 379 3.6E-55 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 PRINTS PR00301 70kDa heat shock protein signature 211 221 3.6E-55 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 PRINTS PR00301 70kDa heat shock protein signature 328 344 3.6E-55 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 Gene3D G3DSA:3.30.420.40 23 373 7.1E-114 T 01-11-2018 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 Gene3D G3DSA:1.20.1270.10 520 614 8.3E-29 T 01-11-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 Gene3D G3DSA:2.60.34.10 378 519 2.0E-49 T 01-11-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 SUPERFAMILY SSF100934 503 614 2.55E-37 T 01-11-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 614 3.5E-272 T 01-11-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 Gene3D G3DSA:3.30.420.40 194 360 7.1E-114 T 01-11-2018 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 Pfam PF00012 Hsp70 protein 22 599 3.2E-198 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 615 45.986 T 01-11-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 Gene3D G3DSA:3.90.640.10 238 310 7.1E-114 T 01-11-2018 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 01-11-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 SUPERFAMILY SSF53067 20 196 1.76E-52 T 01-11-2018 D3790_02370 f1c9d785fcf067e44adff02b8548ed9c 615 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 01-11-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 D3790_12365 36652fb5f850112e4ab1792c4adcf4f9 325 SMART SM00829 10 322 0.0019 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 D3790_12365 36652fb5f850112e4ab1792c4adcf4f9 325 SUPERFAMILY SSF51735 116 288 1.28E-36 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_12365 36652fb5f850112e4ab1792c4adcf4f9 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 4.2E-5 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 D3790_12365 36652fb5f850112e4ab1792c4adcf4f9 325 Gene3D G3DSA:3.40.50.720 125 292 2.9E-121 T 01-11-2018 D3790_12365 36652fb5f850112e4ab1792c4adcf4f9 325 Gene3D G3DSA:3.90.180.10 16 323 2.9E-121 T 01-11-2018 D3790_12365 36652fb5f850112e4ab1792c4adcf4f9 325 Pfam PF00107 Zinc-binding dehydrogenase 158 273 1.9E-15 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 D3790_12365 36652fb5f850112e4ab1792c4adcf4f9 325 SUPERFAMILY SSF50129 1 144 1.73E-45 T 01-11-2018 IPR011032 GroES-like superfamily D3790_12365 36652fb5f850112e4ab1792c4adcf4f9 325 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 324 1.9E-132 T 01-11-2018 IPR014188 Acrylyl-CoA reductase AcuI D3790_02280 c540912b24f755bafa8e1b64d7539d88 170 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 62 99 - T 01-11-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 D3790_02280 c540912b24f755bafa8e1b64d7539d88 170 Pfam PF14437 MafB19-like deaminase 13 158 2.0E-31 T 01-11-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 D3790_02280 c540912b24f755bafa8e1b64d7539d88 170 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 17 158 48.099 T 01-11-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 D3790_02280 c540912b24f755bafa8e1b64d7539d88 170 SUPERFAMILY SSF53927 10 162 6.86E-58 T 01-11-2018 IPR016193 Cytidine deaminase-like GO:0003824 D3790_02280 c540912b24f755bafa8e1b64d7539d88 170 Gene3D G3DSA:3.40.140.10 6 170 6.3E-66 T 01-11-2018 D3790_07235 d9288f09ae758b13bc35403e8cda7744 93 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 82 2.0E-31 T 01-11-2018 IPR027354 YcgL domain D3790_07235 d9288f09ae758b13bc35403e8cda7744 93 Gene3D G3DSA:3.10.510.20 1 74 1.9E-31 T 01-11-2018 IPR038068 YcgL-like superfamily D3790_07235 d9288f09ae758b13bc35403e8cda7744 93 SUPERFAMILY SSF160191 1 89 1.06E-38 T 01-11-2018 IPR038068 YcgL-like superfamily D3790_07235 d9288f09ae758b13bc35403e8cda7744 93 Pfam PF05166 YcgL domain 3 75 1.5E-33 T 01-11-2018 IPR027354 YcgL domain D3790_07235 d9288f09ae758b13bc35403e8cda7744 93 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 27.303 T 01-11-2018 IPR027354 YcgL domain D3790_11590 519c9a9c81ae511cace539ea7004e81c 156 SMART SM01001 1 146 3.0E-92 T 01-11-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 D3790_11590 519c9a9c81ae511cace539ea7004e81c 156 Pfam PF00731 AIR carboxylase 1 144 7.5E-60 T 01-11-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 D3790_11590 519c9a9c81ae511cace539ea7004e81c 156 SUPERFAMILY SSF52255 1 154 1.02E-62 T 01-11-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 D3790_11590 519c9a9c81ae511cace539ea7004e81c 156 Gene3D G3DSA:3.40.50.7700 1 156 5.4E-70 T 01-11-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 D3790_11590 519c9a9c81ae511cace539ea7004e81c 156 PIRSF PIRSF001338 1 155 3.4E-62 T 01-11-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 D3790_11590 519c9a9c81ae511cace539ea7004e81c 156 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 1 151 1.1E-62 T 01-11-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 D3790_11590 519c9a9c81ae511cace539ea7004e81c 156 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 1 150 28.478 T 01-11-2018 IPR033747 Class I PurE D3790_14225 2493e3c60a58529f9e0eebeaca4b64f4 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.409 T 01-11-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 D3790_14225 2493e3c60a58529f9e0eebeaca4b64f4 233 SUPERFAMILY SSF54814 2 106 7.06E-38 T 01-11-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 D3790_14225 2493e3c60a58529f9e0eebeaca4b64f4 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.7E-41 T 01-11-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14225 2493e3c60a58529f9e0eebeaca4b64f4 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 01-11-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14225 2493e3c60a58529f9e0eebeaca4b64f4 233 Gene3D G3DSA:3.30.1140.32 108 208 3.4E-46 T 01-11-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14225 2493e3c60a58529f9e0eebeaca4b64f4 233 SUPERFAMILY SSF54821 108 206 7.19E-41 T 01-11-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14225 2493e3c60a58529f9e0eebeaca4b64f4 233 SMART SM00322 60 125 1.9E-7 T 01-11-2018 IPR004087 K Homology domain GO:0003676 D3790_14225 2493e3c60a58529f9e0eebeaca4b64f4 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 1.4E-100 T 01-11-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 D3790_14225 2493e3c60a58529f9e0eebeaca4b64f4 233 Pfam PF07650 KH domain 38 111 2.1E-18 T 01-11-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14225 2493e3c60a58529f9e0eebeaca4b64f4 233 Gene3D G3DSA:3.30.300.20 17 107 5.1E-30 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta D3790_03895 1439f8436ba20e7e9099a9a43934072b 163 SUPERFAMILY SSF54690 5 150 2.88E-54 T 01-11-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 D3790_03895 1439f8436ba20e7e9099a9a43934072b 163 Gene3D G3DSA:3.90.1170.40 1 150 5.7E-57 T 01-11-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 D3790_03895 1439f8436ba20e7e9099a9a43934072b 163 Pfam PF02391 MoaE protein 9 120 2.7E-37 T 01-11-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 D3790_02315 bf3a5834645f838a12ddef6fd6710617 112 Gene3D G3DSA:3.30.70.120 1 112 8.8E-49 T 01-11-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal D3790_02315 bf3a5834645f838a12ddef6fd6710617 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 01-11-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 D3790_02315 bf3a5834645f838a12ddef6fd6710617 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.1E-44 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D3790_02315 bf3a5834645f838a12ddef6fd6710617 112 PRINTS PR00340 P-II protein signature 2 17 2.4E-44 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D3790_02315 bf3a5834645f838a12ddef6fd6710617 112 PRINTS PR00340 P-II protein signature 23 41 2.4E-44 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D3790_02315 bf3a5834645f838a12ddef6fd6710617 112 PRINTS PR00340 P-II protein signature 52 75 2.4E-44 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D3790_02315 bf3a5834645f838a12ddef6fd6710617 112 PRINTS PR00340 P-II protein signature 83 103 2.4E-44 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D3790_02315 bf3a5834645f838a12ddef6fd6710617 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 01-11-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 D3790_02315 bf3a5834645f838a12ddef6fd6710617 112 SMART SM00938 4 105 8.1E-68 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D3790_02315 bf3a5834645f838a12ddef6fd6710617 112 PIRSF PIRSF039144 1 112 5.0E-58 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D3790_02315 bf3a5834645f838a12ddef6fd6710617 112 SUPERFAMILY SSF54913 1 112 7.94E-47 T 01-11-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta D3790_03185 42d8a4d979c8bd78f0b8ead1b1b8be0e 69 PRINTS PR00050 Cold shock protein signature 42 60 2.9E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_03185 42d8a4d979c8bd78f0b8ead1b1b8be0e 69 PRINTS PR00050 Cold shock protein signature 6 21 2.9E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_03185 42d8a4d979c8bd78f0b8ead1b1b8be0e 69 PRINTS PR00050 Cold shock protein signature 27 36 2.9E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_03185 42d8a4d979c8bd78f0b8ead1b1b8be0e 69 PIRSF PIRSF002599 1 69 6.4E-27 T 01-11-2018 IPR012156 Cold shock, CspA GO:0003676 D3790_03185 42d8a4d979c8bd78f0b8ead1b1b8be0e 69 SMART SM00357 5 69 6.4E-32 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 D3790_03185 42d8a4d979c8bd78f0b8ead1b1b8be0e 69 Gene3D G3DSA:2.40.50.140 1 68 5.0E-32 T 01-11-2018 D3790_03185 42d8a4d979c8bd78f0b8ead1b1b8be0e 69 SUPERFAMILY SSF50249 3 68 3.27E-26 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_03185 42d8a4d979c8bd78f0b8ead1b1b8be0e 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 4.3E-33 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_03185 42d8a4d979c8bd78f0b8ead1b1b8be0e 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 01-11-2018 IPR019844 Cold-shock conserved site D3790_14350 d331f1d2918bc793031933484577d71c 319 Pfam PF08279 HTH domain 10 58 1.2E-12 T 01-11-2018 IPR013196 Helix-turn-helix, type 11 D3790_14350 d331f1d2918bc793031933484577d71c 319 Gene3D G3DSA:3.30.930.10 65 270 2.6E-72 T 01-11-2018 D3790_14350 d331f1d2918bc793031933484577d71c 319 SUPERFAMILY SSF55681 71 268 1.43E-57 T 01-11-2018 D3790_14350 d331f1d2918bc793031933484577d71c 319 Pfam PF03099 Biotin/lipoate A/B protein ligase family 83 208 2.8E-21 T 01-11-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 D3790_14350 d331f1d2918bc793031933484577d71c 319 SUPERFAMILY SSF46785 5 60 2.04E-11 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_14350 d331f1d2918bc793031933484577d71c 319 Gene3D G3DSA:2.30.30.100 271 313 1.5E-20 T 01-11-2018 D3790_14350 d331f1d2918bc793031933484577d71c 319 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 7 70 5.5E-21 T 01-11-2018 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 D3790_14350 d331f1d2918bc793031933484577d71c 319 Pfam PF02237 Biotin protein ligase C terminal domain 271 317 6.3E-9 T 01-11-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D3790_14350 d331f1d2918bc793031933484577d71c 319 Gene3D G3DSA:1.10.10.10 1 64 2.1E-18 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_14350 d331f1d2918bc793031933484577d71c 319 SUPERFAMILY SSF50037 271 317 1.65E-10 T 01-11-2018 IPR008988 Transcriptional repressor, C-terminal D3790_14350 d331f1d2918bc793031933484577d71c 319 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 31.557 T 01-11-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 D3790_14350 d331f1d2918bc793031933484577d71c 319 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 317 1.3E-74 T 01-11-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D3790_07660 4a3747bceb65b67439c17a33e2a7cffb 363 Gene3D G3DSA:3.10.20.30 48 362 3.5E-152 T 01-11-2018 IPR012675 Beta-grasp domain superfamily D3790_07660 4a3747bceb65b67439c17a33e2a7cffb 363 SUPERFAMILY SSF52540 3 301 8.05E-86 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_07660 4a3747bceb65b67439c17a33e2a7cffb 363 PIRSF PIRSF006641 1 363 1.6E-157 T 01-11-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 D3790_07660 4a3747bceb65b67439c17a33e2a7cffb 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.3E-34 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_07660 4a3747bceb65b67439c17a33e2a7cffb 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.3E-34 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_07660 4a3747bceb65b67439c17a33e2a7cffb 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.3E-34 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_07660 4a3747bceb65b67439c17a33e2a7cffb 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.3E-34 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_07660 4a3747bceb65b67439c17a33e2a7cffb 363 Gene3D G3DSA:3.40.50.300 4 278 3.5E-152 T 01-11-2018 D3790_07660 4a3747bceb65b67439c17a33e2a7cffb 363 Gene3D G3DSA:1.10.150.300 120 200 3.5E-152 T 01-11-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 D3790_07660 4a3747bceb65b67439c17a33e2a7cffb 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 2.3E-21 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_07660 4a3747bceb65b67439c17a33e2a7cffb 363 SUPERFAMILY SSF81271 279 359 1.05E-35 T 01-11-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 D3790_07660 4a3747bceb65b67439c17a33e2a7cffb 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 5.5E-174 T 01-11-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 D3790_07660 4a3747bceb65b67439c17a33e2a7cffb 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.9E-39 T 01-11-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 D3790_07660 4a3747bceb65b67439c17a33e2a7cffb 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.765 T 01-11-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 D3790_14790 ee9371f3a12400f225b968676b60446c 354 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 10 354 7.7E-148 T 01-11-2018 IPR011916 Lipopolysaccharide heptosyltransferase III, putative D3790_14790 ee9371f3a12400f225b968676b60446c 354 Gene3D G3DSA:3.40.50.2000 173 354 6.7E-40 T 01-11-2018 D3790_14790 ee9371f3a12400f225b968676b60446c 354 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 82 324 1.7E-48 T 01-11-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 D3790_14790 ee9371f3a12400f225b968676b60446c 354 SUPERFAMILY SSF53756 10 353 1.43E-78 T 01-11-2018 D3790_14790 ee9371f3a12400f225b968676b60446c 354 Gene3D G3DSA:3.40.50.2000 3 170 9.7E-37 T 01-11-2018 D3790_16070 6ad4ed4c1d17ea88fef9d423ae66f5db 104 Pfam PF01710 Transposase 1 97 6.2E-21 T 01-11-2018 IPR002622 Transposase, Synechocystis PCC 6803 D3790_14470 e0c924a5445ec271176fa50dedde5655 295 SUPERFAMILY SSF51730 22 293 6.08E-95 T 01-11-2018 IPR029041 FAD-linked oxidoreductase-like D3790_14470 e0c924a5445ec271176fa50dedde5655 295 Pfam PF02219 Methylenetetrahydrofolate reductase 18 291 2.7E-107 T 01-11-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 D3790_14470 e0c924a5445ec271176fa50dedde5655 295 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 2.8E-105 T 01-11-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 D3790_14470 e0c924a5445ec271176fa50dedde5655 295 Gene3D G3DSA:3.20.20.220 1 295 6.5E-116 T 01-11-2018 D3790_10850 c3e9afd497511bec04f00f5c81335513 887 SUPERFAMILY SSF52922 702 885 6.6E-63 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D3790_10850 c3e9afd497511bec04f00f5c81335513 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 361 427 4.7E-5 T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D3790_10850 c3e9afd497511bec04f00f5c81335513 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 106 297 9.8E-9 T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D3790_10850 c3e9afd497511bec04f00f5c81335513 887 Gene3D G3DSA:3.40.50.920 707 887 2.5E-73 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D3790_10850 c3e9afd497511bec04f00f5c81335513 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 01-11-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 D3790_10850 c3e9afd497511bec04f00f5c81335513 887 SUPERFAMILY SSF52518 59 466 2.06E-143 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_10850 c3e9afd497511bec04f00f5c81335513 887 Gene3D G3DSA:3.40.50.970 472 706 1.1E-111 T 01-11-2018 D3790_10850 c3e9afd497511bec04f00f5c81335513 887 PIRSF PIRSF000156 1 887 0.0 T 01-11-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 D3790_10850 c3e9afd497511bec04f00f5c81335513 887 Gene3D G3DSA:3.40.50.970 57 471 1.4E-136 T 01-11-2018 D3790_10850 c3e9afd497511bec04f00f5c81335513 887 SUPERFAMILY SSF52518 474 701 2.94E-99 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_13625 4c58bfbbc6f50fca9e2f069c67e57ceb 385 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 321 50.715 T 01-11-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 D3790_13625 4c58bfbbc6f50fca9e2f069c67e57ceb 385 Pfam PF13484 4Fe-4S double cluster binding domain 198 262 7.8E-19 T 01-11-2018 D3790_13625 4c58bfbbc6f50fca9e2f069c67e57ceb 385 Pfam PF08331 Domain of unknown function (DUF1730) 62 146 2.7E-22 T 01-11-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 D3790_13625 4c58bfbbc6f50fca9e2f069c67e57ceb 385 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 199 210 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3790_13625 4c58bfbbc6f50fca9e2f069c67e57ceb 385 SUPERFAMILY SSF54862 175 320 3.26E-18 T 01-11-2018 D3790_13625 4c58bfbbc6f50fca9e2f069c67e57ceb 385 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 354 1.4E-149 T 01-11-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 D3790_03195 9b691068c64086c777ef0ec1aa9f2ac4 321 SUPERFAMILY SSF102114 53 316 2.35E-69 T 01-11-2018 D3790_03195 9b691068c64086c777ef0ec1aa9f2ac4 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 28 73 1.8E-6 T 01-11-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D3790_03195 9b691068c64086c777ef0ec1aa9f2ac4 321 SMART SM00729 84 293 1.4E-17 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D3790_03195 9b691068c64086c777ef0ec1aa9f2ac4 321 Gene3D G3DSA:3.20.20.70 83 294 9.9E-22 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_03195 9b691068c64086c777ef0ec1aa9f2ac4 321 PIRSF PIRSF005963 1 321 1.1E-132 T 01-11-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D3790_03195 9b691068c64086c777ef0ec1aa9f2ac4 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 4.1E-160 T 01-11-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D3790_03195 9b691068c64086c777ef0ec1aa9f2ac4 321 Pfam PF04055 Radical SAM superfamily 91 251 3.4E-16 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D3790_03195 9b691068c64086c777ef0ec1aa9f2ac4 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 157.831 T 01-11-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D3790_00360 b3bfc64b004b5aea99a0d467fc157b39 918 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 15 913 0.0 T 01-11-2018 IPR022303 Conjugative transfer ATPase D3790_00360 b3bfc64b004b5aea99a0d467fc157b39 918 Gene3D G3DSA:3.40.50.300 692 873 6.2E-18 T 01-11-2018 D3790_00360 b3bfc64b004b5aea99a0d467fc157b39 918 Gene3D G3DSA:3.40.50.300 467 576 1.4E-7 T 01-11-2018 D3790_00360 b3bfc64b004b5aea99a0d467fc157b39 918 SUPERFAMILY SSF52540 445 851 8.93E-33 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_00360 b3bfc64b004b5aea99a0d467fc157b39 918 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 26 297 1.2E-70 T 01-11-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase D3790_16760 0f76ad028fcc5387d365d3608769eb6c 181 SUPERFAMILY SSF50104 125 180 7.02E-20 T 01-11-2018 IPR008991 Translation protein SH3-like domain superfamily D3790_16760 0f76ad028fcc5387d365d3608769eb6c 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.968 T 01-11-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 D3790_16760 0f76ad028fcc5387d365d3608769eb6c 181 Pfam PF02357 Transcription termination factor nusG 7 112 4.4E-28 T 01-11-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D3790_16760 0f76ad028fcc5387d365d3608769eb6c 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 01-11-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site D3790_16760 0f76ad028fcc5387d365d3608769eb6c 181 SMART SM00738 6 115 9.9E-49 T 01-11-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D3790_16760 0f76ad028fcc5387d365d3608769eb6c 181 Pfam PF00467 KOW motif 130 162 5.4E-8 T 01-11-2018 IPR005824 KOW D3790_16760 0f76ad028fcc5387d365d3608769eb6c 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 6.8E-72 T 01-11-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 D3790_16760 0f76ad028fcc5387d365d3608769eb6c 181 Gene3D G3DSA:2.30.30.30 124 180 4.2E-27 T 01-11-2018 IPR014722 Ribosomal protein L2, domain 2 D3790_16760 0f76ad028fcc5387d365d3608769eb6c 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 01-11-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 D3790_16760 0f76ad028fcc5387d365d3608769eb6c 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 01-11-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 D3790_16760 0f76ad028fcc5387d365d3608769eb6c 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 01-11-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 D3790_16760 0f76ad028fcc5387d365d3608769eb6c 181 SMART SM00739 127 154 1.0E-6 T 01-11-2018 IPR005824 KOW D3790_16760 0f76ad028fcc5387d365d3608769eb6c 181 SUPERFAMILY SSF82679 6 116 2.49E-40 T 01-11-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D3790_16760 0f76ad028fcc5387d365d3608769eb6c 181 Gene3D G3DSA:3.30.70.940 1 123 9.9E-49 T 01-11-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D3790_03220 0d4f5ce48eb5292feab74a4395191aae 334 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 76 176 9.5E-29 T 01-11-2018 IPR012997 Rare lipoprotein A D3790_03220 0d4f5ce48eb5292feab74a4395191aae 334 SUPERFAMILY SSF50685 86 156 7.01E-5 T 01-11-2018 IPR036908 RlpA-like domain superfamily D3790_03220 0d4f5ce48eb5292feab74a4395191aae 334 Pfam PF05036 Sporulation related domain 261 332 2.1E-13 T 01-11-2018 IPR007730 Sporulation-like domain GO:0042834 D3790_03220 0d4f5ce48eb5292feab74a4395191aae 334 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 28 168 19.356 T 01-11-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 D3790_03220 0d4f5ce48eb5292feab74a4395191aae 334 Gene3D G3DSA:2.40.40.10 73 165 9.7E-28 T 01-11-2018 IPR036908 RlpA-like domain superfamily D3790_03220 0d4f5ce48eb5292feab74a4395191aae 334 SUPERFAMILY SSF110997 261 332 1.57E-13 T 01-11-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D3790_03220 0d4f5ce48eb5292feab74a4395191aae 334 Pfam PF03330 Lytic transglycolase 73 155 8.6E-19 T 01-11-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain D3790_03220 0d4f5ce48eb5292feab74a4395191aae 334 Gene3D G3DSA:3.30.70.1070 262 333 2.8E-10 T 01-11-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D3790_15705 a934e3bf8dca50712b5e2b912e2b1b58 372 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 73 80 6.3E-8 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D3790_15705 a934e3bf8dca50712b5e2b912e2b1b58 372 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 134 153 6.3E-8 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D3790_15705 a934e3bf8dca50712b5e2b912e2b1b58 372 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 54 64 6.3E-8 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D3790_15705 a934e3bf8dca50712b5e2b912e2b1b58 372 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 159 168 6.3E-8 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D3790_15705 a934e3bf8dca50712b5e2b912e2b1b58 372 Gene3D G3DSA:3.10.20.30 266 372 7.8E-29 T 01-11-2018 IPR012675 Beta-grasp domain superfamily D3790_15705 a934e3bf8dca50712b5e2b912e2b1b58 372 SUPERFAMILY SSF52343 112 260 1.03E-34 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3790_15705 a934e3bf8dca50712b5e2b912e2b1b58 372 Pfam PF00175 Oxidoreductase NAD-binding domain 136 244 9.5E-17 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 D3790_15705 a934e3bf8dca50712b5e2b912e2b1b58 372 SUPERFAMILY SSF63380 17 125 1.33E-24 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel D3790_15705 a934e3bf8dca50712b5e2b912e2b1b58 372 SUPERFAMILY SSF54292 253 369 9.96E-28 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D3790_15705 a934e3bf8dca50712b5e2b912e2b1b58 372 Gene3D G3DSA:3.40.50.80 126 265 4.2E-31 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3790_15705 a934e3bf8dca50712b5e2b912e2b1b58 372 PRINTS PR00410 Phenol hydroxylase reductase family signature 159 168 6.3E-8 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D3790_15705 a934e3bf8dca50712b5e2b912e2b1b58 372 PRINTS PR00410 Phenol hydroxylase reductase family signature 54 66 6.3E-8 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D3790_15705 a934e3bf8dca50712b5e2b912e2b1b58 372 PRINTS PR00410 Phenol hydroxylase reductase family signature 134 153 6.3E-8 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D3790_15705 a934e3bf8dca50712b5e2b912e2b1b58 372 PRINTS PR00410 Phenol hydroxylase reductase family signature 230 238 6.3E-8 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D3790_15705 a934e3bf8dca50712b5e2b912e2b1b58 372 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 22 371 2.4E-147 T 01-11-2018 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 D3790_15705 a934e3bf8dca50712b5e2b912e2b1b58 372 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 319 327 - T 01-11-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 D3790_15705 a934e3bf8dca50712b5e2b912e2b1b58 372 Gene3D G3DSA:2.40.30.10 20 122 2.5E-24 T 01-11-2018 D3790_15705 a934e3bf8dca50712b5e2b912e2b1b58 372 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 286 361 2.0E-16 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 D3790_15705 a934e3bf8dca50712b5e2b912e2b1b58 372 Pfam PF00970 Oxidoreductase FAD-binding domain 30 121 4.2E-12 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 D3790_01975 aadc6ffca8429db0cdf6c41795e73b36 386 Pfam PF13808 DDE_Tnp_1-associated 16 101 1.8E-32 T 01-11-2018 IPR032806 H repeat-associated protein, N-terminal D3790_01975 aadc6ffca8429db0cdf6c41795e73b36 386 Pfam PF01609 Transposase DDE domain 109 350 2.9E-17 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_07040 678b50f7b02955df2ee924bfd7b266f0 254 SMART SM00100 30 151 1.5E-22 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain D3790_07040 678b50f7b02955df2ee924bfd7b266f0 254 SUPERFAMILY SSF46785 165 244 1.84E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_07040 678b50f7b02955df2ee924bfd7b266f0 254 Gene3D G3DSA:1.10.10.10 165 246 5.9E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_07040 678b50f7b02955df2ee924bfd7b266f0 254 SMART SM00419 187 235 1.5E-13 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 D3790_07040 678b50f7b02955df2ee924bfd7b266f0 254 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 8.5E-17 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 D3790_07040 678b50f7b02955df2ee924bfd7b266f0 254 SUPERFAMILY SSF51206 23 162 5.89E-32 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like D3790_07040 678b50f7b02955df2ee924bfd7b266f0 254 Gene3D G3DSA:2.60.120.10 43 164 4.4E-48 T 01-11-2018 IPR014710 RmlC-like jelly roll fold D3790_07040 678b50f7b02955df2ee924bfd7b266f0 254 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 01-11-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 D3790_07040 678b50f7b02955df2ee924bfd7b266f0 254 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 3.9E-16 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain D3790_07040 678b50f7b02955df2ee924bfd7b266f0 254 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.6E-12 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 D3790_07040 678b50f7b02955df2ee924bfd7b266f0 254 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.6E-12 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 D3790_13510 6f00df24feeec9d97b00c6986f90ab1e 247 SUPERFAMILY SSF56655 1 244 3.14E-74 T 01-11-2018 D3790_13510 6f00df24feeec9d97b00c6986f90ab1e 247 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 01-11-2018 IPR020583 Inositol monophosphatase, metal-binding site D3790_13510 6f00df24feeec9d97b00c6986f90ab1e 247 Pfam PF00459 Inositol monophosphatase family 4 231 2.1E-50 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D3790_13510 6f00df24feeec9d97b00c6986f90ab1e 247 Gene3D G3DSA:3.30.540.10 1 145 3.6E-45 T 01-11-2018 D3790_13510 6f00df24feeec9d97b00c6986f90ab1e 247 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 245 1.5E-96 T 01-11-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 D3790_13510 6f00df24feeec9d97b00c6986f90ab1e 247 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 1 247 40.842 T 01-11-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 D3790_13510 6f00df24feeec9d97b00c6986f90ab1e 247 Gene3D G3DSA:3.40.190.80 146 246 2.3E-31 T 01-11-2018 D3790_11065 a2983bf67121fc626b6bd64d6fa1e76e 389 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 193 207 - T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D3790_11065 a2983bf67121fc626b6bd64d6fa1e76e 389 Gene3D G3DSA:3.90.1150.10 253 389 1.3E-57 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_11065 a2983bf67121fc626b6bd64d6fa1e76e 389 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 385 4.8E-153 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D3790_11065 a2983bf67121fc626b6bd64d6fa1e76e 389 Gene3D G3DSA:3.40.640.10 7 252 1.5E-92 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_11065 a2983bf67121fc626b6bd64d6fa1e76e 389 SUPERFAMILY SSF53383 20 386 1.34E-117 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_11065 a2983bf67121fc626b6bd64d6fa1e76e 389 PIRSF PIRSF001434 1 388 2.0E-146 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D3790_02785 3d78641544bc5d2f40faf1344ea8632c 552 Pfam PF02954 Bacterial regulatory protein, Fis family 521 547 3.8E-9 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D3790_02785 3d78641544bc5d2f40faf1344ea8632c 552 Gene3D G3DSA:3.40.50.2300 22 194 7.2E-68 T 01-11-2018 D3790_02785 3d78641544bc5d2f40faf1344ea8632c 552 Gene3D G3DSA:1.10.10.60 516 546 6.4E-8 T 01-11-2018 D3790_02785 3d78641544bc5d2f40faf1344ea8632c 552 Gene3D G3DSA:3.40.50.300 210 403 1.4E-59 T 01-11-2018 D3790_02785 3d78641544bc5d2f40faf1344ea8632c 552 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 247 260 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3790_02785 3d78641544bc5d2f40faf1344ea8632c 552 SUPERFAMILY SSF52540 222 467 1.82E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_02785 3d78641544bc5d2f40faf1344ea8632c 552 SUPERFAMILY SSF46689 449 547 1.34E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_02785 3d78641544bc5d2f40faf1344ea8632c 552 Gene3D G3DSA:1.10.8.60 404 490 2.2E-13 T 01-11-2018 D3790_02785 3d78641544bc5d2f40faf1344ea8632c 552 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 449 458 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site D3790_02785 3d78641544bc5d2f40faf1344ea8632c 552 SMART SM00382 243 399 1.9E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_02785 3d78641544bc5d2f40faf1344ea8632c 552 TIGRFAM TIGR02329 propionate_PrpR: propionate catabolism operon regulatory protein PrpR 10 546 2.3E-258 T 01-11-2018 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR GO:0000156|GO:0000160|GO:0003677|GO:0005737|GO:0019629 D3790_02785 3d78641544bc5d2f40faf1344ea8632c 552 Gene3D G3DSA:3.40.50.10660 91 178 7.2E-68 T 01-11-2018 D3790_02785 3d78641544bc5d2f40faf1344ea8632c 552 SUPERFAMILY SSF159800 14 197 1.83E-53 T 01-11-2018 D3790_02785 3d78641544bc5d2f40faf1344ea8632c 552 Pfam PF06506 Propionate catabolism activator 36 199 2.6E-51 T 01-11-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 D3790_02785 3d78641544bc5d2f40faf1344ea8632c 552 Pfam PF00158 Sigma-54 interaction domain 224 398 8.4E-62 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D3790_12190 a005f180a3e4ec98c1f0feb5e80c1302 151 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 4 133 2.4E-54 T 01-11-2018 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 D3790_12190 a005f180a3e4ec98c1f0feb5e80c1302 151 Gene3D G3DSA:1.10.10.10 1 135 9.1E-30 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_12190 a005f180a3e4ec98c1f0feb5e80c1302 151 SMART SM00347 22 122 8.1E-27 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_12190 a005f180a3e4ec98c1f0feb5e80c1302 151 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 01-11-2018 IPR023187 Transcriptional regulator MarR-type, conserved site D3790_12190 a005f180a3e4ec98c1f0feb5e80c1302 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 1.8E-5 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_12190 a005f180a3e4ec98c1f0feb5e80c1302 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 1.8E-5 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_12190 a005f180a3e4ec98c1f0feb5e80c1302 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 1.8E-5 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_12190 a005f180a3e4ec98c1f0feb5e80c1302 151 Pfam PF01047 MarR family 29 86 3.1E-12 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_12190 a005f180a3e4ec98c1f0feb5e80c1302 151 SUPERFAMILY SSF46785 4 138 7.1E-29 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_04235 c74ff7562c5d6ba9d370e39055bb05df 404 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 01-11-2018 IPR018201 Beta-ketoacyl synthase, active site D3790_04235 c74ff7562c5d6ba9d370e39055bb05df 404 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 1.9E-30 T 01-11-2018 IPR014031 Beta-ketoacyl synthase, C-terminal D3790_04235 c74ff7562c5d6ba9d370e39055bb05df 404 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 1.5E-40 T 01-11-2018 IPR014030 Beta-ketoacyl synthase, N-terminal D3790_04235 c74ff7562c5d6ba9d370e39055bb05df 404 SUPERFAMILY SSF53901 213 402 2.14E-62 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_04235 c74ff7562c5d6ba9d370e39055bb05df 404 Gene3D G3DSA:3.40.47.10 258 404 1.6E-50 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_04235 c74ff7562c5d6ba9d370e39055bb05df 404 SMART SM00825 Beta-ketoacyl synthase 4 404 5.6E-14 T 01-11-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain D3790_04235 c74ff7562c5d6ba9d370e39055bb05df 404 Gene3D G3DSA:3.40.47.10 6 257 6.0E-63 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_04235 c74ff7562c5d6ba9d370e39055bb05df 404 SUPERFAMILY SSF53901 1 251 2.41E-62 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_14110 32164da2aa92a3ba611e576714d83378 458 SUPERFAMILY SSF116726 390 451 6.15E-8 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D3790_14110 32164da2aa92a3ba611e576714d83378 458 SUPERFAMILY SSF51735 232 376 1.03E-32 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_14110 32164da2aa92a3ba611e576714d83378 458 SUPERFAMILY SSF51735 1 152 3.08E-37 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_14110 32164da2aa92a3ba611e576714d83378 458 Gene3D G3DSA:3.40.50.720 2 139 6.6E-51 T 01-11-2018 D3790_14110 32164da2aa92a3ba611e576714d83378 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 2.1E-34 T 01-11-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 D3790_14110 32164da2aa92a3ba611e576714d83378 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 2.1E-34 T 01-11-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 D3790_14110 32164da2aa92a3ba611e576714d83378 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.1E-34 T 01-11-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 D3790_14110 32164da2aa92a3ba611e576714d83378 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.1E-34 T 01-11-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 D3790_14110 32164da2aa92a3ba611e576714d83378 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.1E-34 T 01-11-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 D3790_14110 32164da2aa92a3ba611e576714d83378 458 Pfam PF02254 TrkA-N domain 3 125 1.4E-30 T 01-11-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 D3790_14110 32164da2aa92a3ba611e576714d83378 458 Pfam PF02254 TrkA-N domain 235 350 2.2E-24 T 01-11-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 D3790_14110 32164da2aa92a3ba611e576714d83378 458 Gene3D G3DSA:3.40.50.720 233 366 3.5E-35 T 01-11-2018 D3790_14110 32164da2aa92a3ba611e576714d83378 458 Gene3D G3DSA:3.30.70.1450 367 458 3.0E-28 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D3790_14110 32164da2aa92a3ba611e576714d83378 458 Pfam PF02080 TrkA-C domain 156 225 5.0E-10 T 01-11-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 D3790_14110 32164da2aa92a3ba611e576714d83378 458 Pfam PF02080 TrkA-C domain 391 451 9.4E-11 T 01-11-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 D3790_14110 32164da2aa92a3ba611e576714d83378 458 Gene3D G3DSA:3.30.70.1450 140 232 4.6E-22 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D3790_14110 32164da2aa92a3ba611e576714d83378 458 SUPERFAMILY SSF116726 148 226 1.22E-9 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D3790_13920 df1d809ddc438e7c184ab078160c10b4 356 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 10 350 55.222 T 01-11-2018 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 D3790_13920 df1d809ddc438e7c184ab078160c10b4 356 SUPERFAMILY SSF160355 56 321 3.4E-78 T 01-11-2018 D3790_13920 df1d809ddc438e7c184ab078160c10b4 356 Pfam PF02706 Chain length determinant protein 18 84 1.4E-13 T 01-11-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 D3790_12805 83b1f6d55f10e2bde3c330cead672c1e 366 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 01-11-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 D3790_12805 83b1f6d55f10e2bde3c330cead672c1e 366 Gene3D G3DSA:1.20.1090.10 160 366 1.0E-80 T 01-11-2018 D3790_12805 83b1f6d55f10e2bde3c330cead672c1e 366 PIRSF PIRSF000112 1 362 1.3E-94 T 01-11-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 D3790_12805 83b1f6d55f10e2bde3c330cead672c1e 366 Gene3D G3DSA:3.40.50.1970 2 159 5.9E-44 T 01-11-2018 D3790_12805 83b1f6d55f10e2bde3c330cead672c1e 366 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 350 1.1E-65 T 01-11-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 D3790_12805 83b1f6d55f10e2bde3c330cead672c1e 366 SUPERFAMILY SSF56796 2 360 1.23E-87 T 01-11-2018 D3790_01105 a4c36e8b60ac26e385d56f769903f88e 139 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 139 25.359 T 01-11-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 D3790_01105 a4c36e8b60ac26e385d56f769903f88e 139 SUPERFAMILY SSF53098 4 137 6.53E-42 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_01105 a4c36e8b60ac26e385d56f769903f88e 139 SMART SM00732 4 104 1.5E-39 T 01-11-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 D3790_01105 a4c36e8b60ac26e385d56f769903f88e 139 Pfam PF03652 Holliday junction resolvase 5 136 4.5E-41 T 01-11-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 D3790_01105 a4c36e8b60ac26e385d56f769903f88e 139 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 136 5.8E-57 T 01-11-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 D3790_01105 a4c36e8b60ac26e385d56f769903f88e 139 Gene3D G3DSA:3.30.420.140 2 139 1.3E-44 T 01-11-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 D3790_14950 c21b8e78c418c868212302598d92545a 624 SUPERFAMILY SSF51735 279 603 2.2E-56 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_14950 c21b8e78c418c868212302598d92545a 624 Gene3D G3DSA:3.40.50.720 278 608 7.4E-112 T 01-11-2018 D3790_14950 c21b8e78c418c868212302598d92545a 624 Pfam PF02719 Polysaccharide biosynthesis protein 281 574 3.2E-126 T 01-11-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain D3790_14950 c21b8e78c418c868212302598d92545a 624 Pfam PF13727 CoA-binding domain 68 234 1.2E-11 T 01-11-2018 D3790_14950 c21b8e78c418c868212302598d92545a 624 Gene3D G3DSA:3.40.50.720 139 262 6.5E-30 T 01-11-2018 D3790_14950 c21b8e78c418c868212302598d92545a 624 SUPERFAMILY SSF53335 125 326 1.28E-16 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_16745 cc880495f4a32020949b50cf86a93dd8 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.889 T 01-11-2018 IPR022973 Ribosomal protein L10 D3790_16745 cc880495f4a32020949b50cf86a93dd8 165 Pfam PF00466 Ribosomal protein L10 5 101 1.1E-27 T 01-11-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 D3790_16745 cc880495f4a32020949b50cf86a93dd8 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 01-11-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_16745 cc880495f4a32020949b50cf86a93dd8 165 Gene3D G3DSA:3.30.70.1730 1 125 8.1E-37 T 01-11-2018 D3790_16745 cc880495f4a32020949b50cf86a93dd8 165 SUPERFAMILY SSF160369 4 162 9.29E-50 T 01-11-2018 D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 Gene3D G3DSA:3.30.300.30 1375 1460 5.2E-11 T 01-11-2018 D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 Gene3D G3DSA:3.40.50.1820 1461 1558 1.6E-22 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 Pfam PF00501 AMP-binding enzyme 555 949 3.3E-98 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 Gene3D G3DSA:3.30.300.30 943 1029 6.6E-15 T 01-11-2018 D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 SUPERFAMILY SSF53335 1036 1191 6.54E-27 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 576 973 9.1E-129 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 Gene3D G3DSA:3.30.559.10 1559 1923 2.5E-67 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 SUPERFAMILY SSF52777 81 258 1.33E-45 T 01-11-2018 D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 ProSitePatterns PS00455 Putative AMP-binding domain signature. 702 713 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 SUPERFAMILY SSF52777 266 505 5.78E-57 T 01-11-2018 D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1494 1509 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 Gene3D G3DSA:3.30.559.10 80 452 3.9E-138 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 Pfam PF00668 Condensation domain 77 506 1.2E-100 T 01-11-2018 IPR001242 Condensation domain D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 Pfam PF00668 Condensation domain 1556 1991 1.8E-64 T 01-11-2018 IPR001242 Condensation domain D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 Gene3D G3DSA:3.40.50.150 1043 1224 2.5E-31 T 01-11-2018 D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 SUPERFAMILY SSF52777 1556 1758 3.67E-30 T 01-11-2018 D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 Gene3D G3DSA:3.30.559.30 1742 1990 2.5E-67 T 01-11-2018 D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 Pfam PF00550 Phosphopantetheine attachment site 1471 1534 3.5E-9 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 Gene3D G3DSA:3.40.50.12780 549 942 9.0E-130 T 01-11-2018 D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 Pfam PF13649 Methyltransferase domain 1073 1162 8.4E-13 T 01-11-2018 D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 SUPERFAMILY SSF56801 517 1483 6.41E-150 T 01-11-2018 D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 Gene3D G3DSA:3.30.559.30 262 503 3.9E-138 T 01-11-2018 D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 SUPERFAMILY SSF52777 1745 1991 1.89E-28 T 01-11-2018 D3790_06745 234d0b79f8dd1fce7ed836eaade7e6cb 2000 SUPERFAMILY SSF47336 1462 1535 5.1E-17 T 01-11-2018 IPR036736 ACP-like superfamily D3790_17630 07ca92bbd5c75c6826979baf565bd652 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 3.8E-38 T 01-11-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 D3790_17630 07ca92bbd5c75c6826979baf565bd652 472 Gene3D G3DSA:3.50.50.60 285 405 3.3E-22 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_17630 07ca92bbd5c75c6826979baf565bd652 472 Gene3D G3DSA:1.10.1060.10 11 146 1.1E-34 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 D3790_17630 07ca92bbd5c75c6826979baf565bd652 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 471 7.2E-254 T 01-11-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 D3790_17630 07ca92bbd5c75c6826979baf565bd652 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 1.3E-25 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D3790_17630 07ca92bbd5c75c6826979baf565bd652 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 1.4E-38 T 01-11-2018 D3790_17630 07ca92bbd5c75c6826979baf565bd652 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.4E-38 T 01-11-2018 D3790_17630 07ca92bbd5c75c6826979baf565bd652 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.4E-38 T 01-11-2018 D3790_17630 07ca92bbd5c75c6826979baf565bd652 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 1.4E-38 T 01-11-2018 D3790_17630 07ca92bbd5c75c6826979baf565bd652 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 1.4E-38 T 01-11-2018 D3790_17630 07ca92bbd5c75c6826979baf565bd652 472 SUPERFAMILY SSF51971 145 401 8.24E-69 T 01-11-2018 D3790_17630 07ca92bbd5c75c6826979baf565bd652 472 Gene3D G3DSA:3.50.50.60 147 264 3.5E-32 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_17630 07ca92bbd5c75c6826979baf565bd652 472 SUPERFAMILY SSF46548 7 157 3.35E-41 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 D3790_17630 07ca92bbd5c75c6826979baf565bd652 472 Gene3D G3DSA:3.50.50.60 407 469 3.3E-22 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_02930 6b924de12552039129fd9d5bc8895545 875 SUPERFAMILY SSF55681 4 255 1.02E-108 T 01-11-2018 D3790_02930 6b924de12552039129fd9d5bc8895545 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 204.246 T 01-11-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 D3790_02930 6b924de12552039129fd9d5bc8895545 875 Pfam PF01411 tRNA synthetases class II (A) 7 553 6.0E-235 T 01-11-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 D3790_02930 6b924de12552039129fd9d5bc8895545 875 Gene3D G3DSA:3.30.930.10 2 252 2.0E-125 T 01-11-2018 D3790_02930 6b924de12552039129fd9d5bc8895545 875 SUPERFAMILY SSF55186 552 710 3.53E-51 T 01-11-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 D3790_02930 6b924de12552039129fd9d5bc8895545 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 01-11-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 D3790_02930 6b924de12552039129fd9d5bc8895545 875 SUPERFAMILY SSF101353 256 464 5.49E-60 T 01-11-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 D3790_02930 6b924de12552039129fd9d5bc8895545 875 SMART SM00863 653 696 1.0E-19 T 01-11-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 D3790_02930 6b924de12552039129fd9d5bc8895545 875 Gene3D G3DSA:3.30.54.20 624 677 2.0E-51 T 01-11-2018 D3790_02930 6b924de12552039129fd9d5bc8895545 875 Gene3D G3DSA:2.40.30.130 461 552 3.9E-12 T 01-11-2018 D3790_02930 6b924de12552039129fd9d5bc8895545 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 1.3E-16 T 01-11-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 D3790_02930 6b924de12552039129fd9d5bc8895545 875 Gene3D G3DSA:3.10.310.40 764 872 4.0E-34 T 01-11-2018 D3790_02930 6b924de12552039129fd9d5bc8895545 875 SUPERFAMILY SSF50447 455 552 1.02E-18 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily D3790_02930 6b924de12552039129fd9d5bc8895545 875 Pfam PF02272 DHHA1 domain 735 871 1.2E-27 T 01-11-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 D3790_02930 6b924de12552039129fd9d5bc8895545 875 Gene3D G3DSA:3.30.980.10 563 697 2.0E-51 T 01-11-2018 D3790_02930 6b924de12552039129fd9d5bc8895545 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 1.1E-32 T 01-11-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 D3790_02930 6b924de12552039129fd9d5bc8895545 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 1.1E-32 T 01-11-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 D3790_02930 6b924de12552039129fd9d5bc8895545 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 1.1E-32 T 01-11-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 D3790_02930 6b924de12552039129fd9d5bc8895545 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.1E-32 T 01-11-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 D3790_02930 6b924de12552039129fd9d5bc8895545 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 1.1E-32 T 01-11-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 D3790_10710 7d06d8ef196b034fd9d9f1dd3ab9900c 958 Gene3D G3DSA:3.90.1150.10 766 902 5.7E-41 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_10710 7d06d8ef196b034fd9d9f1dd3ab9900c 958 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 957 24.988 T 01-11-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 D3790_10710 7d06d8ef196b034fd9d9f1dd3ab9900c 958 Gene3D G3DSA:3.40.640.10 96 355 8.4E-99 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_10710 7d06d8ef196b034fd9d9f1dd3ab9900c 958 Gene3D G3DSA:3.40.640.10 524 751 7.5E-64 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_10710 7d06d8ef196b034fd9d9f1dd3ab9900c 958 Pfam PF02347 Glycine cleavage system P-protein 16 440 2.5E-182 T 01-11-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 D3790_10710 7d06d8ef196b034fd9d9f1dd3ab9900c 958 Pfam PF02347 Glycine cleavage system P-protein 461 739 6.9E-10 T 01-11-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 D3790_10710 7d06d8ef196b034fd9d9f1dd3ab9900c 958 SUPERFAMILY SSF53383 17 438 8.76E-95 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_10710 7d06d8ef196b034fd9d9f1dd3ab9900c 958 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 951 0.0 T 01-11-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 D3790_10710 7d06d8ef196b034fd9d9f1dd3ab9900c 958 SUPERFAMILY SSF53383 461 952 1.1E-98 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_08660 6f98fa3672c7c0631e6670926d696b83 150 Pfam PF10097 Predicted membrane protein (DUF2335) 51 100 8.9E-21 T 01-11-2018 IPR019284 Xylella phage Xfas53, Orf42 D3790_10660 99489769c810f7cc7b3e93d0e2cd6dec 181 Pfam PF00535 Glycosyl transferase family 2 2 89 4.5E-12 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 D3790_10660 99489769c810f7cc7b3e93d0e2cd6dec 181 Gene3D G3DSA:3.90.550.10 1 175 4.4E-28 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_10660 99489769c810f7cc7b3e93d0e2cd6dec 181 SUPERFAMILY SSF53448 2 164 1.22E-26 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_11005 91926de69efa2a0722131b6677d7de66 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 01-11-2018 D3790_11005 91926de69efa2a0722131b6677d7de66 335 Gene3D G3DSA:3.40.50.2300 62 154 1.2E-24 T 01-11-2018 D3790_11005 91926de69efa2a0722131b6677d7de66 335 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 8.5E-146 T 01-11-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 D3790_11005 91926de69efa2a0722131b6677d7de66 335 Gene3D G3DSA:3.40.50.2300 155 334 1.7E-27 T 01-11-2018 D3790_11005 91926de69efa2a0722131b6677d7de66 335 SUPERFAMILY SSF47413 2 58 9.57E-16 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_11005 91926de69efa2a0722131b6677d7de66 335 SUPERFAMILY SSF53822 60 314 4.89E-42 T 01-11-2018 IPR028082 Periplasmic binding protein-like I D3790_11005 91926de69efa2a0722131b6677d7de66 335 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 252 3.1E-13 T 01-11-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain D3790_11005 91926de69efa2a0722131b6677d7de66 335 SMART SM00354 1 73 7.4E-32 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D3790_11005 91926de69efa2a0722131b6677d7de66 335 Gene3D G3DSA:1.10.260.40 1 61 1.7E-28 T 01-11-2018 D3790_11005 91926de69efa2a0722131b6677d7de66 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 5.0E-19 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D3790_10740 2369ed22922e41df6b26d5cd9dc229e8 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 13 173 2.1E-34 T 01-11-2018 IPR011978 Uncharacterised protein family UPF0149 D3790_10740 2369ed22922e41df6b26d5cd9dc229e8 192 SUPERFAMILY SSF101327 7 173 7.85E-46 T 01-11-2018 IPR036255 YgfB-like superfamily D3790_10740 2369ed22922e41df6b26d5cd9dc229e8 192 Gene3D G3DSA:1.20.120.740 4 192 1.9E-53 T 01-11-2018 D3790_10740 2369ed22922e41df6b26d5cd9dc229e8 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 190 31.801 T 01-11-2018 IPR011978 Uncharacterised protein family UPF0149 D3790_07470 1e82b107e379960d9a99ca3c741da060 323 Gene3D G3DSA:3.40.50.150 94 308 3.4E-23 T 01-11-2018 D3790_07470 1e82b107e379960d9a99ca3c741da060 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 12 322 54.283 T 01-11-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 D3790_07470 1e82b107e379960d9a99ca3c741da060 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 8.8E-169 T 01-11-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like D3790_07470 1e82b107e379960d9a99ca3c741da060 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 7 321 5.5E-148 T 01-11-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 D3790_07470 1e82b107e379960d9a99ca3c741da060 323 SUPERFAMILY SSF53335 91 323 1.14E-34 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_09770 ddd7761ffec17911407e2c1cf1cd00ab 404 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 399 48.154 T 01-11-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 D3790_09770 ddd7761ffec17911407e2c1cf1cd00ab 404 SUPERFAMILY SSF54675 3 138 9.18E-43 T 01-11-2018 D3790_09770 ddd7761ffec17911407e2c1cf1cd00ab 404 SUPERFAMILY SSF51690 121 397 1.43E-87 T 01-11-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 D3790_09770 ddd7761ffec17911407e2c1cf1cd00ab 404 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 398 1.2E-161 T 01-11-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 D3790_09770 ddd7761ffec17911407e2c1cf1cd00ab 404 Gene3D G3DSA:3.20.140.10 1 404 5.3E-164 T 01-11-2018 D3790_09770 ddd7761ffec17911407e2c1cf1cd00ab 404 PIRSF PIRSF000484 1 390 4.8E-61 T 01-11-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 D3790_09770 ddd7761ffec17911407e2c1cf1cd00ab 404 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 172 397 9.0E-82 T 01-11-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 D3790_17020 ff7c6f888f660e7affd6081d4b464572 58 Gene3D G3DSA:1.10.10.60 13 58 2.4E-6 T 01-11-2018 D3790_17020 ff7c6f888f660e7affd6081d4b464572 58 Pfam PF01527 Transposase 9 55 4.1E-11 T 01-11-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D3790_17020 ff7c6f888f660e7affd6081d4b464572 58 SUPERFAMILY SSF46689 10 54 3.05E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_02815 88bf8d3ca76d421117e2c5dd4a6133c0 173 SUPERFAMILY SSF58113 28 163 9.68E-7 T 01-11-2018 D3790_02815 88bf8d3ca76d421117e2c5dd4a6133c0 173 Gene3D G3DSA:1.20.120.20 22 171 1.1E-10 T 01-11-2018 D3790_16860 5f9ab8af2dedb13ff48d0575b8ab82fc 176 Gene3D G3DSA:2.40.10.330 71 121 1.4E-59 T 01-11-2018 D3790_16860 5f9ab8af2dedb13ff48d0575b8ab82fc 176 SUPERFAMILY SSF54534 2 140 1.43E-31 T 01-11-2018 D3790_16860 5f9ab8af2dedb13ff48d0575b8ab82fc 176 Gene3D G3DSA:3.10.50.40 3 154 1.4E-59 T 01-11-2018 D3790_16860 5f9ab8af2dedb13ff48d0575b8ab82fc 176 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 1.9E-10 T 01-11-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D3790_04645 aadfb589b6f57f4d2b02de9f03db64a4 565 Gene3D G3DSA:3.40.50.970 2 196 3.6E-57 T 01-11-2018 D3790_04645 aadfb589b6f57f4d2b02de9f03db64a4 565 Pfam PF16582 Middle domain of thiamine pyrophosphate 183 397 1.1E-83 T 01-11-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 D3790_04645 aadfb589b6f57f4d2b02de9f03db64a4 565 Gene3D G3DSA:3.40.50.970 361 565 4.4E-58 T 01-11-2018 D3790_04645 aadfb589b6f57f4d2b02de9f03db64a4 565 SUPERFAMILY SSF52518 370 557 4.48E-32 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_04645 aadfb589b6f57f4d2b02de9f03db64a4 565 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 424 543 2.5E-7 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 D3790_04645 aadfb589b6f57f4d2b02de9f03db64a4 565 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 562 31.344 T 01-11-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 D3790_04645 aadfb589b6f57f4d2b02de9f03db64a4 565 Gene3D G3DSA:3.40.50.1220 212 337 2.2E-41 T 01-11-2018 D3790_04645 aadfb589b6f57f4d2b02de9f03db64a4 565 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 439 3.3E-134 T 01-11-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 D3790_04645 aadfb589b6f57f4d2b02de9f03db64a4 565 SUPERFAMILY SSF52518 7 177 1.67E-29 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_04645 aadfb589b6f57f4d2b02de9f03db64a4 565 PIRSF PIRSF004983 1 565 2.7E-172 T 01-11-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 D3790_04645 aadfb589b6f57f4d2b02de9f03db64a4 565 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 167 5.0E-26 T 01-11-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 D3790_00470 99d6467763a3554b2cd03cca623a1020 257 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 78 173 7.1E-8 T 01-11-2018 IPR008775 Phytanoyl-CoA dioxygenase D3790_00470 99d6467763a3554b2cd03cca623a1020 257 SUPERFAMILY SSF51197 2 195 8.06E-22 T 01-11-2018 D3790_00470 99d6467763a3554b2cd03cca623a1020 257 Gene3D G3DSA:2.60.120.620 1 222 2.7E-17 T 01-11-2018 D3790_15820 b6b280f678cff224deae94d53ae7dc6f 706 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 697 1.7E-264 T 01-11-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 D3790_15820 b6b280f678cff224deae94d53ae7dc6f 706 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 23 695 0.0 T 01-11-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 D3790_08735 833d21bab411db6e71c8e06bd09f3487 137 SMART SM00881 9 104 1.6E-22 T 01-11-2018 IPR003781 CoA-binding GO:0048037 D3790_08735 833d21bab411db6e71c8e06bd09f3487 137 SUPERFAMILY SSF51735 2 135 4.33E-41 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_08735 833d21bab411db6e71c8e06bd09f3487 137 Gene3D G3DSA:3.40.50.720 1 137 1.2E-40 T 01-11-2018 D3790_08735 833d21bab411db6e71c8e06bd09f3487 137 Pfam PF13380 CoA binding domain 14 130 3.4E-37 T 01-11-2018 IPR003781 CoA-binding GO:0048037 D3790_10215 5632b86752a88b0d6907aa98b18d734c 222 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 01-11-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 D3790_10215 5632b86752a88b0d6907aa98b18d734c 222 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 01-11-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 D3790_10215 5632b86752a88b0d6907aa98b18d734c 222 Gene3D G3DSA:1.10.286.10 1 84 1.9E-36 T 01-11-2018 D3790_10215 5632b86752a88b0d6907aa98b18d734c 222 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 34.132 T 01-11-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 D3790_10215 5632b86752a88b0d6907aa98b18d734c 222 Pfam PF01227 GTP cyclohydrolase I 38 216 9.2E-64 T 01-11-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 D3790_10215 5632b86752a88b0d6907aa98b18d734c 222 SUPERFAMILY SSF55620 8 217 7.41E-75 T 01-11-2018 D3790_10215 5632b86752a88b0d6907aa98b18d734c 222 Gene3D G3DSA:3.30.1130.10 85 219 5.5E-54 T 01-11-2018 D3790_10215 5632b86752a88b0d6907aa98b18d734c 222 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 218 8.8E-85 T 01-11-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 D3790_09815 c685662f20e4cf86d6f17f382336de37 1487 Pfam PF04310 MukB N-terminal 2 227 1.2E-123 T 01-11-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 D3790_09815 c685662f20e4cf86d6f17f382336de37 1487 PIRSF PIRSF005246 1 1485 0.0 T 01-11-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 D3790_09815 c685662f20e4cf86d6f17f382336de37 1487 Gene3D G3DSA:3.40.1140.10 1 227 9.6E-101 T 01-11-2018 D3790_09815 c685662f20e4cf86d6f17f382336de37 1487 Pfam PF16330 MukB hinge domain 646 810 4.3E-74 T 01-11-2018 IPR032520 MukB, hinge domain D3790_09815 c685662f20e4cf86d6f17f382336de37 1487 Gene3D G3DSA:1.20.1060.30 667 778 1.3E-132 T 01-11-2018 D3790_09815 c685662f20e4cf86d6f17f382336de37 1487 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 10.887 T 01-11-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 D3790_09815 c685662f20e4cf86d6f17f382336de37 1487 SUPERFAMILY SSF52540 21 1433 1.12E-5 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09815 c685662f20e4cf86d6f17f382336de37 1487 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 5.0E-15 T 01-11-2018 D3790_09815 c685662f20e4cf86d6f17f382336de37 1487 Gene3D G3DSA:3.40.1140.10 1383 1468 1.5E-38 T 01-11-2018 D3790_09815 c685662f20e4cf86d6f17f382336de37 1487 Gene3D G3DSA:1.20.58.850 582 852 1.3E-132 T 01-11-2018 D3790_09815 c685662f20e4cf86d6f17f382336de37 1487 SUPERFAMILY SSF52540 22 224 2.86E-23 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09815 c685662f20e4cf86d6f17f382336de37 1487 Gene3D G3DSA:1.20.58.850 620 830 1.3E-132 T 01-11-2018 D3790_03200 16976f594d1d91591b7b42885917752d 211 SUPERFAMILY SSF55681 4 206 2.82E-68 T 01-11-2018 D3790_03200 16976f594d1d91591b7b42885917752d 211 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 01-11-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 D3790_03200 16976f594d1d91591b7b42885917752d 211 Gene3D G3DSA:3.30.930.10 2 204 1.2E-60 T 01-11-2018 D3790_03200 16976f594d1d91591b7b42885917752d 211 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 27 204 4.0E-72 T 01-11-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D3790_03200 16976f594d1d91591b7b42885917752d 211 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 3.0E-20 T 01-11-2018 D3790_03200 16976f594d1d91591b7b42885917752d 211 PIRSF PIRSF016262 1 211 2.2E-57 T 01-11-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D3790_03200 16976f594d1d91591b7b42885917752d 211 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 37.254 T 01-11-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D3790_03200 16976f594d1d91591b7b42885917752d 211 Pfam PF03099 Biotin/lipoate A/B protein ligase family 61 159 1.4E-5 T 01-11-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 D3790_08815 f63f9fcd911f53c9d0689d4cdb0867b7 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 1.4E-20 T 01-11-2018 IPR025161 Putative transposase IS4/IS5 family D3790_08815 f63f9fcd911f53c9d0689d4cdb0867b7 253 Pfam PF13586 Transposase DDE domain 163 248 5.7E-18 T 01-11-2018 IPR025668 Transposase DDE domain D3790_12375 62f16a1024b0397ecea4bc01a8f33bcf 151 Gene3D G3DSA:2.40.50.100 72 151 1.0E-31 T 01-11-2018 D3790_12375 62f16a1024b0397ecea4bc01a8f33bcf 151 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 107 124 - T 01-11-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D3790_12375 62f16a1024b0397ecea4bc01a8f33bcf 151 SUPERFAMILY SSF51230 76 151 6.54E-26 T 01-11-2018 IPR011053 Single hybrid motif D3790_12375 62f16a1024b0397ecea4bc01a8f33bcf 151 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 151 2.6E-62 T 01-11-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 D3790_12375 62f16a1024b0397ecea4bc01a8f33bcf 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 80 93 1.7E-18 T 01-11-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 D3790_12375 62f16a1024b0397ecea4bc01a8f33bcf 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 97 111 1.7E-18 T 01-11-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 D3790_12375 62f16a1024b0397ecea4bc01a8f33bcf 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 112 125 1.7E-18 T 01-11-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 D3790_12375 62f16a1024b0397ecea4bc01a8f33bcf 151 Pfam PF00364 Biotin-requiring enzyme 78 150 1.5E-25 T 01-11-2018 IPR000089 Biotin/lipoyl attachment D3790_01620 3ad2e7b73c81d4872c3b7f269ec6f903 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 1.4E-20 T 01-11-2018 IPR025161 Putative transposase IS4/IS5 family D3790_01620 3ad2e7b73c81d4872c3b7f269ec6f903 253 Pfam PF01609 Transposase DDE domain 88 246 3.7E-18 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_16870 48b5c0a3e28b2ae573203b96885cd7d2 601 Pfam PF00999 Sodium/hydrogen exchanger family 12 372 2.9E-64 T 01-11-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 D3790_16870 48b5c0a3e28b2ae573203b96885cd7d2 601 Gene3D G3DSA:3.40.50.720 398 560 2.0E-35 T 01-11-2018 D3790_16870 48b5c0a3e28b2ae573203b96885cd7d2 601 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 282 3.0E-83 T 01-11-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 D3790_16870 48b5c0a3e28b2ae573203b96885cd7d2 601 Gene3D G3DSA:1.20.1530.20 4 384 6.0E-79 T 01-11-2018 IPR038770 Sodium/solute symporter superfamily D3790_16870 48b5c0a3e28b2ae573203b96885cd7d2 601 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 598 47.0 T 01-11-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 D3790_16870 48b5c0a3e28b2ae573203b96885cd7d2 601 SUPERFAMILY SSF51735 401 529 1.22E-27 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_16870 48b5c0a3e28b2ae573203b96885cd7d2 601 Pfam PF02254 TrkA-N domain 402 511 1.0E-22 T 01-11-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 D3790_17525 7f4172aeecc222a7d7344d5be75589ca 197 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 191 25.88 T 01-11-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 D3790_17525 7f4172aeecc222a7d7344d5be75589ca 197 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 13 189 1.7E-52 T 01-11-2018 IPR010664 Lipopolysaccharide assembly, LptC-related D3790_17525 7f4172aeecc222a7d7344d5be75589ca 197 Gene3D G3DSA:2.60.450.10 60 197 5.6E-46 T 01-11-2018 D3790_17525 7f4172aeecc222a7d7344d5be75589ca 197 PIRSF PIRSF028513 1 192 8.5E-35 T 01-11-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 D3790_17525 7f4172aeecc222a7d7344d5be75589ca 197 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 7 188 3.2E-49 T 01-11-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 D3790_07335 de1716c857c8b22abc7227b4f8756067 480 Gene3D G3DSA:3.20.20.60 6 341 6.3E-154 T 01-11-2018 D3790_07335 de1716c857c8b22abc7227b4f8756067 480 Gene3D G3DSA:2.40.33.10 74 172 6.3E-154 T 01-11-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_07335 de1716c857c8b22abc7227b4f8756067 480 SUPERFAMILY SSF52935 329 479 5.36E-39 T 01-11-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_07335 de1716c857c8b22abc7227b4f8756067 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 3.4E-171 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_07335 de1716c857c8b22abc7227b4f8756067 480 Gene3D G3DSA:3.40.1380.20 342 475 6.3E-154 T 01-11-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_07335 de1716c857c8b22abc7227b4f8756067 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 1.7E-51 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_07335 de1716c857c8b22abc7227b4f8756067 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 1.7E-51 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_07335 de1716c857c8b22abc7227b4f8756067 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 1.7E-51 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_07335 de1716c857c8b22abc7227b4f8756067 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 1.7E-51 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_07335 de1716c857c8b22abc7227b4f8756067 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 1.7E-51 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_07335 de1716c857c8b22abc7227b4f8756067 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.7E-51 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_07335 de1716c857c8b22abc7227b4f8756067 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 1.7E-51 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_07335 de1716c857c8b22abc7227b4f8756067 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 2.6E-29 T 01-11-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_07335 de1716c857c8b22abc7227b4f8756067 480 SUPERFAMILY SSF51621 3 345 9.77E-89 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D3790_07335 de1716c857c8b22abc7227b4f8756067 480 SUPERFAMILY SSF50800 74 168 2.62E-23 T 01-11-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily D3790_07335 de1716c857c8b22abc7227b4f8756067 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 8.9E-130 T 01-11-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D3790_12070 7bf2f6cc3709e0e2e56c7ca37e21b738 777 Pfam PF03288 Poxvirus D5 protein-like 670 765 1.4E-10 T 01-11-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal D3790_12070 7bf2f6cc3709e0e2e56c7ca37e21b738 777 SUPERFAMILY SSF52540 469 627 1.08E-12 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_12070 7bf2f6cc3709e0e2e56c7ca37e21b738 777 Pfam PF13362 Toprim domain 185 289 4.5E-8 T 01-11-2018 IPR006171 TOPRIM domain D3790_12070 7bf2f6cc3709e0e2e56c7ca37e21b738 777 SUPERFAMILY SSF46785 670 766 2.42E-33 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_12070 7bf2f6cc3709e0e2e56c7ca37e21b738 777 Pfam PF08273 Zinc-binding domain of primase-helicase 19 58 1.3E-9 T 01-11-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 D3790_12070 7bf2f6cc3709e0e2e56c7ca37e21b738 777 SMART SM00778 19 58 1.1E-10 T 01-11-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 D3790_12070 7bf2f6cc3709e0e2e56c7ca37e21b738 777 SMART SM00885 334 468 9.0E-21 T 01-11-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal D3790_12070 7bf2f6cc3709e0e2e56c7ca37e21b738 777 Gene3D G3DSA:1.10.10.10 669 768 2.8E-38 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_12070 7bf2f6cc3709e0e2e56c7ca37e21b738 777 SUPERFAMILY SSF57783 18 88 2.55E-10 T 01-11-2018 D3790_12070 7bf2f6cc3709e0e2e56c7ca37e21b738 777 Gene3D G3DSA:3.40.50.300 453 632 8.4E-13 T 01-11-2018 D3790_12070 7bf2f6cc3709e0e2e56c7ca37e21b738 777 Pfam PF08706 D5 N terminal like 335 466 3.2E-10 T 01-11-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal D3790_05735 4499055e5441519bcb01d17ceb4c37db 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 3.1E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_05735 4499055e5441519bcb01d17ceb4c37db 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 3.1E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_05735 4499055e5441519bcb01d17ceb4c37db 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 3.1E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_05735 4499055e5441519bcb01d17ceb4c37db 219 SUPERFAMILY SSF46894 136 210 6.46E-19 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D3790_05735 4499055e5441519bcb01d17ceb4c37db 219 SMART SM00421 146 203 5.7E-18 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_05735 4499055e5441519bcb01d17ceb4c37db 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 2.3E-18 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_05735 4499055e5441519bcb01d17ceb4c37db 219 Gene3D G3DSA:3.40.50.12740 2 209 3.9E-57 T 01-11-2018 D3790_05735 4499055e5441519bcb01d17ceb4c37db 219 SUPERFAMILY SSF52172 2 132 4.55E-31 T 01-11-2018 IPR011006 CheY-like superfamily D3790_05735 4499055e5441519bcb01d17ceb4c37db 219 Pfam PF00072 Response regulator receiver domain 4 116 3.7E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_05735 4499055e5441519bcb01d17ceb4c37db 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_05735 4499055e5441519bcb01d17ceb4c37db 219 SMART SM00448 2 115 6.3E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_12720 0f145bbd1969b0e6ef9977bc468122cd 430 Pfam PF11862 Domain of unknown function (DUF3382) 5 109 1.6E-24 T 01-11-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal D3790_12720 0f145bbd1969b0e6ef9977bc468122cd 430 Pfam PF02653 Branched-chain amino acid transport system / permease component 119 404 6.4E-56 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 D3790_04520 fafa766cd8b804ee460167762b8267d6 207 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 6.0E-16 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_04520 fafa766cd8b804ee460167762b8267d6 207 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 6.0E-16 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_04520 fafa766cd8b804ee460167762b8267d6 207 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 6.0E-16 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_04520 fafa766cd8b804ee460167762b8267d6 207 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 6.0E-16 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_04520 fafa766cd8b804ee460167762b8267d6 207 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 4.8E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_04520 fafa766cd8b804ee460167762b8267d6 207 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.8E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_04520 fafa766cd8b804ee460167762b8267d6 207 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 4.8E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_04520 fafa766cd8b804ee460167762b8267d6 207 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D3790_04520 fafa766cd8b804ee460167762b8267d6 207 SUPERFAMILY SSF51735 3 195 1.57E-51 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_04520 fafa766cd8b804ee460167762b8267d6 207 Pfam PF00106 short chain dehydrogenase 6 194 1.0E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_04520 fafa766cd8b804ee460167762b8267d6 207 Gene3D G3DSA:3.40.50.720 1 203 2.4E-53 T 01-11-2018 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 Gene3D G3DSA:3.90.1100.10 646 713 4.3E-21 T 01-11-2018 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 1.9E-27 T 01-11-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 Gene3D G3DSA:2.40.50.150 833 954 1.2E-44 T 01-11-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 Gene3D G3DSA:2.40.270.10 790 832 5.4E-7 T 01-11-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 Gene3D G3DSA:3.90.1800.10 1252 1306 8.1E-11 T 01-11-2018 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 01-11-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 4.4E-161 T 01-11-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 Gene3D G3DSA:3.90.1110.10 157 270 3.9E-27 T 01-11-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 01-11-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 Gene3D G3DSA:2.40.270.10 1034 1242 2.0E-93 T 01-11-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 Gene3D G3DSA:2.40.50.100 714 788 1.7E-32 T 01-11-2018 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.4E-30 T 01-11-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 287 3.5E-7 T 01-11-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 338 454 3.3E-16 T 01-11-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 SUPERFAMILY SSF64484 12 1341 0.0 T 01-11-2018 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.355 T 01-11-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 2.4E-25 T 01-11-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 3.3E-57 T 01-11-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 Gene3D G3DSA:3.90.1100.10 442 643 3.1E-71 T 01-11-2018 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 Gene3D G3DSA:3.90.1100.10 19 156 6.8E-49 T 01-11-2018 D3790_16735 e7364f1d59d6c0d11e72de79d9a9d8c1 1342 Gene3D G3DSA:3.90.1110.10 316 441 2.1E-36 T 01-11-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_12935 f291a6239e8edbfbfd7ed4bfe29a612e 90 Gene3D G3DSA:4.10.520.10 1 90 1.2E-37 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D3790_12935 f291a6239e8edbfbfd7ed4bfe29a612e 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.3E-33 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_12935 f291a6239e8edbfbfd7ed4bfe29a612e 90 SUPERFAMILY SSF47729 1 90 3.53E-33 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D3790_12935 f291a6239e8edbfbfd7ed4bfe29a612e 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.8E-20 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_12935 f291a6239e8edbfbfd7ed4bfe29a612e 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.8E-20 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_12935 f291a6239e8edbfbfd7ed4bfe29a612e 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.8E-20 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_12935 f291a6239e8edbfbfd7ed4bfe29a612e 90 SMART SM00411 1 90 3.0E-44 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_12935 f291a6239e8edbfbfd7ed4bfe29a612e 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 01-11-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 D3790_06010 4d0c23eab82c9935db478952a9a1be24 163 SUPERFAMILY SSF141452 6 161 7.19E-27 T 01-11-2018 IPR036624 Hcp1-like superfamily D3790_06010 4d0c23eab82c9935db478952a9a1be24 163 Gene3D G3DSA:2.30.110.20 5 162 2.5E-32 T 01-11-2018 IPR036624 Hcp1-like superfamily D3790_06010 4d0c23eab82c9935db478952a9a1be24 163 Pfam PF05638 Type VI secretion system effector, Hcp 9 137 1.6E-26 T 01-11-2018 IPR008514 Type VI secretion system effector, Hcp D3790_13350 6c558408b643476310a99bb146aa57fc 923 SUPERFAMILY SSF50447 596 677 1.33E-22 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily D3790_13350 6c558408b643476310a99bb146aa57fc 923 SUPERFAMILY SSF52156 700 829 3.53E-37 T 01-11-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily D3790_13350 6c558408b643476310a99bb146aa57fc 923 Gene3D G3DSA:2.40.30.10 594 712 1.5E-39 T 01-11-2018 D3790_13350 6c558408b643476310a99bb146aa57fc 923 Pfam PF11987 Translation-initiation factor 2 707 812 2.4E-36 T 01-11-2018 IPR023115 Translation initiation factor IF- 2, domain 3 D3790_13350 6c558408b643476310a99bb146aa57fc 923 Pfam PF00009 Elongation factor Tu GTP binding domain 427 583 4.3E-35 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_13350 6c558408b643476310a99bb146aa57fc 923 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 426 580 4.3E-32 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D3790_13350 6c558408b643476310a99bb146aa57fc 923 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 5.2E-9 T 01-11-2018 IPR006847 Translation initiation factor IF-2, N-terminal D3790_13350 6c558408b643476310a99bb146aa57fc 923 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 346 396 8.9E-15 T 01-11-2018 IPR006847 Translation initiation factor IF-2, N-terminal D3790_13350 6c558408b643476310a99bb146aa57fc 923 Gene3D G3DSA:3.40.50.300 420 593 3.3E-72 T 01-11-2018 D3790_13350 6c558408b643476310a99bb146aa57fc 923 Gene3D G3DSA:3.40.50.10050 716 823 1.2E-36 T 01-11-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily D3790_13350 6c558408b643476310a99bb146aa57fc 923 Gene3D G3DSA:3.30.56.50 2 50 3.5E-25 T 01-11-2018 D3790_13350 6c558408b643476310a99bb146aa57fc 923 ProSitePatterns PS01176 Initiation factor 2 signature. 873 895 - T 01-11-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 D3790_13350 6c558408b643476310a99bb146aa57fc 923 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 920 17.617 T 01-11-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 D3790_13350 6c558408b643476310a99bb146aa57fc 923 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 60 98 4.2E-16 T 01-11-2018 IPR013575 Initiation factor 2 associated domain, bacterial D3790_13350 6c558408b643476310a99bb146aa57fc 923 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 338 922 5.3E-290 T 01-11-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 D3790_13350 6c558408b643476310a99bb146aa57fc 923 SUPERFAMILY SSF50447 824 920 5.5E-34 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily D3790_13350 6c558408b643476310a99bb146aa57fc 923 SUPERFAMILY SSF46955 3 50 7.87E-12 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily D3790_13350 6c558408b643476310a99bb146aa57fc 923 SUPERFAMILY SSF52540 423 589 1.05E-52 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_13350 6c558408b643476310a99bb146aa57fc 923 Gene3D G3DSA:2.40.30.10 824 921 2.1E-34 T 01-11-2018 D3790_15120 54589ad0d9bbef27865479d082566a5a 299 SUPERFAMILY SSF161111 9 207 1.44E-49 T 01-11-2018 IPR027469 Cation efflux transmembrane domain superfamily D3790_15120 54589ad0d9bbef27865479d082566a5a 299 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 287 7.8E-73 T 01-11-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 D3790_15120 54589ad0d9bbef27865479d082566a5a 299 Gene3D G3DSA:3.30.70.1350 207 290 2.5E-34 T 01-11-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 D3790_15120 54589ad0d9bbef27865479d082566a5a 299 Pfam PF01545 Cation efflux family 15 206 1.6E-42 T 01-11-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 D3790_15120 54589ad0d9bbef27865479d082566a5a 299 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 3.4E-26 T 01-11-2018 IPR027470 Cation efflux protein, cytoplasmic domain D3790_15120 54589ad0d9bbef27865479d082566a5a 299 Gene3D G3DSA:1.20.1510.10 9 206 8.0E-63 T 01-11-2018 IPR027469 Cation efflux transmembrane domain superfamily D3790_15120 54589ad0d9bbef27865479d082566a5a 299 SUPERFAMILY SSF160240 209 288 3.14E-25 T 01-11-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 D3790_06635 85e967a12a7a3e876b7aaba8b682ac8a 669 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3790_06635 85e967a12a7a3e876b7aaba8b682ac8a 669 Pfam PF13237 4Fe-4S dicluster domain 374 427 5.4E-10 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3790_06635 85e967a12a7a3e876b7aaba8b682ac8a 669 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 669 243.286 T 01-11-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 D3790_06635 85e967a12a7a3e876b7aaba8b682ac8a 669 SUPERFAMILY SSF46548 336 444 1.57E-21 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 D3790_06635 85e967a12a7a3e876b7aaba8b682ac8a 669 Pfam PF10531 SLBB domain 296 344 2.4E-11 T 01-11-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_06635 85e967a12a7a3e876b7aaba8b682ac8a 669 Gene3D G3DSA:3.30.70.20 369 446 6.0E-12 T 01-11-2018 D3790_06635 85e967a12a7a3e876b7aaba8b682ac8a 669 Gene3D G3DSA:3.40.50.11540 144 290 4.8E-13 T 01-11-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_06635 85e967a12a7a3e876b7aaba8b682ac8a 669 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 114 4.7E-31 T 01-11-2018 IPR026902 RnfC Barrel sandwich hybrid domain D3790_06635 85e967a12a7a3e876b7aaba8b682ac8a 669 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 6.6E-49 T 01-11-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_06635 85e967a12a7a3e876b7aaba8b682ac8a 669 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 445 6.4E-184 T 01-11-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 D3790_06635 85e967a12a7a3e876b7aaba8b682ac8a 669 SUPERFAMILY SSF142019 94 303 2.35E-61 T 01-11-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_06635 85e967a12a7a3e876b7aaba8b682ac8a 669 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3790_13410 56cac882829fe81681ab60267d9a3f28 512 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 82 481 1.5E-151 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D3790_13410 56cac882829fe81681ab60267d9a3f28 512 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 64 501 1.0E-146 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D3790_13410 56cac882829fe81681ab60267d9a3f28 512 Gene3D G3DSA:3.50.80.20 117 217 3.5E-20 T 01-11-2018 D3790_13410 56cac882829fe81681ab60267d9a3f28 512 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 380 394 1.7E-34 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D3790_13410 56cac882829fe81681ab60267d9a3f28 512 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 395 409 1.7E-34 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D3790_13410 56cac882829fe81681ab60267d9a3f28 512 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 321 343 1.7E-34 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D3790_13410 56cac882829fe81681ab60267d9a3f28 512 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 93 112 1.7E-34 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D3790_13410 56cac882829fe81681ab60267d9a3f28 512 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 459 472 1.7E-34 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D3790_13410 56cac882829fe81681ab60267d9a3f28 512 SUPERFAMILY SSF56601 62 501 1.79E-94 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like D3790_13410 56cac882829fe81681ab60267d9a3f28 512 Gene3D G3DSA:3.40.710.10 264 512 1.5E-63 T 01-11-2018 D3790_12005 52cb4ef051ff492da902df9534b995c5 259 Gene3D G3DSA:3.90.730.10 66 259 7.0E-17 T 01-11-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 D3790_12005 52cb4ef051ff492da902df9534b995c5 259 Pfam PF00445 Ribonuclease T2 family 73 224 1.8E-6 T 01-11-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 D3790_12005 52cb4ef051ff492da902df9534b995c5 259 SUPERFAMILY SSF55895 68 256 1.7E-24 T 01-11-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 D3790_18005 59b64846d587c384cb57b2ea3cf9254f 949 Gene3D G3DSA:1.10.4050.10 1 110 9.0E-29 T 01-11-2018 D3790_18005 59b64846d587c384cb57b2ea3cf9254f 949 SUPERFAMILY SSF81301 31 287 2.13E-87 T 01-11-2018 D3790_18005 59b64846d587c384cb57b2ea3cf9254f 949 SUPERFAMILY SSF81593 288 437 4.63E-43 T 01-11-2018 D3790_18005 59b64846d587c384cb57b2ea3cf9254f 949 SUPERFAMILY SSF81301 526 816 4.36E-90 T 01-11-2018 D3790_18005 59b64846d587c384cb57b2ea3cf9254f 949 Gene3D G3DSA:1.20.120.330 286 441 1.5E-57 T 01-11-2018 D3790_18005 59b64846d587c384cb57b2ea3cf9254f 949 SUPERFAMILY SSF81593 816 944 2.67E-31 T 01-11-2018 D3790_18005 59b64846d587c384cb57b2ea3cf9254f 949 Gene3D G3DSA:1.20.120.1510 451 562 1.1E-30 T 01-11-2018 D3790_18005 59b64846d587c384cb57b2ea3cf9254f 949 Gene3D G3DSA:1.20.120.330 813 947 5.6E-44 T 01-11-2018 D3790_18005 59b64846d587c384cb57b2ea3cf9254f 949 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 28 946 19.501 T 01-11-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 D3790_18005 59b64846d587c384cb57b2ea3cf9254f 949 Gene3D G3DSA:3.30.460.100 563 812 6.1E-96 T 01-11-2018 D3790_18005 59b64846d587c384cb57b2ea3cf9254f 949 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 555 806 4.2E-96 T 01-11-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 D3790_18005 59b64846d587c384cb57b2ea3cf9254f 949 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 35 277 9.0E-91 T 01-11-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 D3790_18005 59b64846d587c384cb57b2ea3cf9254f 949 Gene3D G3DSA:3.30.460.10 112 285 9.0E-66 T 01-11-2018 D3790_18005 59b64846d587c384cb57b2ea3cf9254f 949 Pfam PF08335 GlnD PII-uridylyltransferase 298 437 8.6E-46 T 01-11-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 D3790_18005 59b64846d587c384cb57b2ea3cf9254f 949 Pfam PF08335 GlnD PII-uridylyltransferase 827 919 5.9E-11 T 01-11-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 D3790_17220 30b0475745727178497d00529b3aa57e 965 SUPERFAMILY SSF52374 14 655 5.42E-137 T 01-11-2018 D3790_17220 30b0475745727178497d00529b3aa57e 965 Gene3D G3DSA:3.40.50.620 16 215 6.8E-65 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_17220 30b0475745727178497d00529b3aa57e 965 Gene3D G3DSA:1.10.730.10 589 831 4.3E-73 T 01-11-2018 D3790_17220 30b0475745727178497d00529b3aa57e 965 Gene3D G3DSA:3.90.740.10 218 254 1.5E-5 T 01-11-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D3790_17220 30b0475745727178497d00529b3aa57e 965 Pfam PF08264 Anticodon-binding domain of tRNA 688 839 3.2E-45 T 01-11-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 D3790_17220 30b0475745727178497d00529b3aa57e 965 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 6.6E-232 T 01-11-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_17220 30b0475745727178497d00529b3aa57e 965 TIGRFAM TIGR00422 valS: valine--tRNA ligase 16 945 0.0 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D3790_17220 30b0475745727178497d00529b3aa57e 965 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 56 67 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_17220 30b0475745727178497d00529b3aa57e 965 Gene3D G3DSA:1.10.287.380 891 963 2.8E-20 T 01-11-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 D3790_17220 30b0475745727178497d00529b3aa57e 965 SUPERFAMILY SSF50677 205 379 8.24E-59 T 01-11-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D3790_17220 30b0475745727178497d00529b3aa57e 965 Gene3D G3DSA:3.40.50.620 315 569 5.6E-71 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_17220 30b0475745727178497d00529b3aa57e 965 SUPERFAMILY SSF46589 898 961 2.93E-15 T 01-11-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 D3790_17220 30b0475745727178497d00529b3aa57e 965 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 898 958 4.2E-17 T 01-11-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 D3790_17220 30b0475745727178497d00529b3aa57e 965 PRINTS PR00986 Valyl-tRNA synthetase signature 250 267 1.9E-35 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D3790_17220 30b0475745727178497d00529b3aa57e 965 PRINTS PR00986 Valyl-tRNA synthetase signature 483 504 1.9E-35 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D3790_17220 30b0475745727178497d00529b3aa57e 965 PRINTS PR00986 Valyl-tRNA synthetase signature 383 396 1.9E-35 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D3790_17220 30b0475745727178497d00529b3aa57e 965 PRINTS PR00986 Valyl-tRNA synthetase signature 49 60 1.9E-35 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D3790_17220 30b0475745727178497d00529b3aa57e 965 PRINTS PR00986 Valyl-tRNA synthetase signature 514 532 1.9E-35 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D3790_17220 30b0475745727178497d00529b3aa57e 965 Hamap MF_02004 Valine--tRNA ligase [valS]. 15 963 16.259 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D3790_17220 30b0475745727178497d00529b3aa57e 965 SUPERFAMILY SSF47323 656 913 1.59E-73 T 01-11-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_17220 30b0475745727178497d00529b3aa57e 965 Gene3D G3DSA:3.90.740.10 255 314 1.7E-5 T 01-11-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D3790_09645 2864380fd8d29a290f26df49bb07cd90 199 PIRSF PIRSF000709 26 174 4.3E-5 T 01-11-2018 D3790_09645 2864380fd8d29a290f26df49bb07cd90 199 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 21 185 8.2E-21 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D3790_09645 2864380fd8d29a290f26df49bb07cd90 199 SUPERFAMILY SSF53254 9 196 5.07E-26 T 01-11-2018 IPR029033 Histidine phosphatase superfamily D3790_09645 2864380fd8d29a290f26df49bb07cd90 199 Gene3D G3DSA:3.40.50.1240 10 187 5.5E-23 T 01-11-2018 IPR029033 Histidine phosphatase superfamily D3790_09645 2864380fd8d29a290f26df49bb07cd90 199 SMART SM00855 11 156 0.0024 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D3790_00110 f483ca8097e9625bf0ed66c65936fdd5 290 PIRSF PIRSF030850 1 290 2.1E-125 T 01-11-2018 IPR011396 Uncharacterised conserved protein UCP030850 D3790_00110 f483ca8097e9625bf0ed66c65936fdd5 290 Pfam PF13391 HNH endonuclease 182 236 1.2E-6 T 01-11-2018 IPR003615 HNH nuclease D3790_11715 65773dba83fc6469c9008a57771cd539 826 PIRSF PIRSF005496 5 826 0.0 T 01-11-2018 D3790_11715 65773dba83fc6469c9008a57771cd539 826 SUPERFAMILY SSF52540 11 437 2.36E-52 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_11715 65773dba83fc6469c9008a57771cd539 826 Pfam PF00271 Helicase conserved C-terminal domain 208 332 1.9E-13 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_11715 65773dba83fc6469c9008a57771cd539 826 Pfam PF00270 DEAD/DEAH box helicase 16 167 2.7E-12 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D3790_11715 65773dba83fc6469c9008a57771cd539 826 Gene3D G3DSA:3.40.50.300 3 184 3.9E-56 T 01-11-2018 D3790_11715 65773dba83fc6469c9008a57771cd539 826 Gene3D G3DSA:1.20.120.1080 376 482 3.4E-10 T 01-11-2018 D3790_11715 65773dba83fc6469c9008a57771cd539 826 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 9 825 0.0 T 01-11-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 D3790_11715 65773dba83fc6469c9008a57771cd539 826 SMART SM00847 393 484 7.8E-9 T 01-11-2018 IPR007502 Helicase-associated domain GO:0004386 D3790_11715 65773dba83fc6469c9008a57771cd539 826 SMART SM00487 7 191 1.5E-25 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_11715 65773dba83fc6469c9008a57771cd539 826 SMART SM00490 231 333 3.7E-16 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_11715 65773dba83fc6469c9008a57771cd539 826 Gene3D G3DSA:3.40.50.300 185 352 2.1E-51 T 01-11-2018 D3790_11715 65773dba83fc6469c9008a57771cd539 826 Pfam PF04408 Helicase associated domain (HA2) 394 452 2.3E-12 T 01-11-2018 IPR007502 Helicase-associated domain GO:0004386 D3790_11715 65773dba83fc6469c9008a57771cd539 826 Pfam PF08482 ATP-dependent helicase C-terminal 681 813 4.1E-52 T 01-11-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal D3790_19305 ae97146731a429cdd8efce5af085391a 256 SUPERFAMILY SSF51556 2 255 2.69E-78 T 01-11-2018 IPR032466 Metal-dependent hydrolase D3790_19305 ae97146731a429cdd8efce5af085391a 256 Gene3D G3DSA:3.20.20.140 1 256 2.3E-89 T 01-11-2018 D3790_19305 ae97146731a429cdd8efce5af085391a 256 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 01-11-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 D3790_19305 ae97146731a429cdd8efce5af085391a 256 PIRSF PIRSF005902 1 256 6.6E-72 T 01-11-2018 IPR001130 TatD family GO:0016788 D3790_19305 ae97146731a429cdd8efce5af085391a 256 Pfam PF01026 TatD related DNase 3 253 4.6E-69 T 01-11-2018 IPR001130 TatD family GO:0016788 D3790_19305 ae97146731a429cdd8efce5af085391a 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 01-11-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 D3790_12875 437ae0a322137c3334f8b00fcd417fe8 532 SMART SM00796 1 191 2.2E-75 T 01-11-2018 IPR003833 Carboxyltransferase domain, subdomain C and D D3790_12875 437ae0a322137c3334f8b00fcd417fe8 532 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 251 517 1.2E-76 T 01-11-2018 IPR003778 Carboxyltransferase domain, subdomain A and B D3790_12875 437ae0a322137c3334f8b00fcd417fe8 532 Gene3D G3DSA:3.30.1360.40 4 71 1.9E-9 T 01-11-2018 D3790_12875 437ae0a322137c3334f8b00fcd417fe8 532 SUPERFAMILY SSF50891 409 521 2.92E-16 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily D3790_12875 437ae0a322137c3334f8b00fcd417fe8 532 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 13 191 2.6E-56 T 01-11-2018 IPR003833 Carboxyltransferase domain, subdomain C and D D3790_12875 437ae0a322137c3334f8b00fcd417fe8 532 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 229 522 1.0E-72 T 01-11-2018 IPR003778 Carboxyltransferase domain, subdomain A and B D3790_12875 437ae0a322137c3334f8b00fcd417fe8 532 SMART SM00797 250 532 9.4E-101 T 01-11-2018 IPR003778 Carboxyltransferase domain, subdomain A and B D3790_12875 437ae0a322137c3334f8b00fcd417fe8 532 SUPERFAMILY SSF50891 80 201 5.69E-37 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily D3790_12875 437ae0a322137c3334f8b00fcd417fe8 532 Gene3D G3DSA:2.40.100.10 73 203 1.1E-48 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily D3790_12875 437ae0a322137c3334f8b00fcd417fe8 532 Gene3D G3DSA:2.40.100.10 405 524 4.5E-39 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily D3790_12875 437ae0a322137c3334f8b00fcd417fe8 532 SUPERFAMILY SSF160467 2 84 3.14E-10 T 01-11-2018 D3790_04515 8b3da3ff4232f6a0b05bf3f6d6c03571 385 Gene3D G3DSA:3.20.20.70 1 384 2.5E-74 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_04515 8b3da3ff4232f6a0b05bf3f6d6c03571 385 SUPERFAMILY SSF51395 9 358 3.66E-63 T 01-11-2018 D3790_04515 8b3da3ff4232f6a0b05bf3f6d6c03571 385 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 16 343 3.6E-45 T 01-11-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 D3790_15765 36145c47238849f83234a6fff833ad8d 404 Gene3D G3DSA:2.40.30.10 188 339 2.8E-128 T 01-11-2018 D3790_15765 36145c47238849f83234a6fff833ad8d 404 SUPERFAMILY SSF51905 1 394 1.42E-60 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_15765 36145c47238849f83234a6fff833ad8d 404 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 2.1E-8 T 01-11-2018 D3790_15765 36145c47238849f83234a6fff833ad8d 404 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.1E-8 T 01-11-2018 D3790_15765 36145c47238849f83234a6fff833ad8d 404 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 2.1E-8 T 01-11-2018 D3790_15765 36145c47238849f83234a6fff833ad8d 404 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 392 5.3E-131 T 01-11-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like D3790_15765 36145c47238849f83234a6fff833ad8d 404 SUPERFAMILY SSF160996 190 338 2.49E-42 T 01-11-2018 D3790_15765 36145c47238849f83234a6fff833ad8d 404 Gene3D G3DSA:1.10.8.260 262 322 2.8E-128 T 01-11-2018 IPR023166 HI0933-like insert domain superfamily D3790_15765 36145c47238849f83234a6fff833ad8d 404 Pfam PF03486 HI0933-like protein 4 392 4.8E-155 T 01-11-2018 D3790_15765 36145c47238849f83234a6fff833ad8d 404 Gene3D G3DSA:3.50.50.60 7 388 2.8E-128 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_16960 631e04f079371b84c99672409189d79a 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 756 781 1.5E-79 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_16960 631e04f079371b84c99672409189d79a 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 847 863 1.5E-79 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_16960 631e04f079371b84c99672409189d79a 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 702 725 1.5E-79 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_16960 631e04f079371b84c99672409189d79a 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 815 826 1.5E-79 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_16960 631e04f079371b84c99672409189d79a 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 732 745 1.5E-79 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_16960 631e04f079371b84c99672409189d79a 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 793 804 1.5E-79 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_16960 631e04f079371b84c99672409189d79a 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 657 679 1.5E-79 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_16960 631e04f079371b84c99672409189d79a 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 877 890 1.5E-79 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_16960 631e04f079371b84c99672409189d79a 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 680 695 1.5E-79 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_16960 631e04f079371b84c99672409189d79a 930 Pfam PF00476 DNA polymerase family A 553 927 6.8E-159 T 01-11-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_16960 631e04f079371b84c99672409189d79a 930 Gene3D G3DSA:3.30.420.10 325 544 2.8E-70 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_16960 631e04f079371b84c99672409189d79a 930 Gene3D G3DSA:1.20.1060.10 545 660 3.8E-42 T 01-11-2018 D3790_16960 631e04f079371b84c99672409189d79a 930 SMART SM00475 7 268 5.9E-135 T 01-11-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 D3790_16960 631e04f079371b84c99672409189d79a 930 TIGRFAM TIGR00593 pola: DNA polymerase I 9 930 3.4E-291 T 01-11-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_16960 631e04f079371b84c99672409189d79a 930 SMART SM00279 173 208 8.2E-13 T 01-11-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 D3790_16960 631e04f079371b84c99672409189d79a 930 ProSitePatterns PS00447 DNA polymerase family A signature. 756 775 - T 01-11-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_16960 631e04f079371b84c99672409189d79a 930 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 5.8E-56 T 01-11-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 D3790_16960 631e04f079371b84c99672409189d79a 930 SMART SM00482 688 894 1.3E-123 T 01-11-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_16960 631e04f079371b84c99672409189d79a 930 Gene3D G3DSA:1.10.150.20 711 854 1.1E-115 T 01-11-2018 D3790_16960 631e04f079371b84c99672409189d79a 930 SUPERFAMILY SSF88723 7 170 2.94E-58 T 01-11-2018 IPR029060 PIN-like domain superfamily D3790_16960 631e04f079371b84c99672409189d79a 930 SUPERFAMILY SSF47807 171 291 6.58E-31 T 01-11-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily D3790_16960 631e04f079371b84c99672409189d79a 930 Gene3D G3DSA:3.30.70.370 666 926 1.1E-115 T 01-11-2018 D3790_16960 631e04f079371b84c99672409189d79a 930 Gene3D G3DSA:3.40.50.1010 9 284 1.3E-94 T 01-11-2018 D3790_16960 631e04f079371b84c99672409189d79a 930 SMART SM00474 328 519 8.8E-47 T 01-11-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 D3790_16960 631e04f079371b84c99672409189d79a 930 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 2.0E-27 T 01-11-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 D3790_16960 631e04f079371b84c99672409189d79a 930 Gene3D G3DSA:1.10.150.20 174 253 1.3E-94 T 01-11-2018 D3790_16960 631e04f079371b84c99672409189d79a 930 Pfam PF01612 3'-5' exonuclease 328 518 2.6E-41 T 01-11-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 D3790_16960 631e04f079371b84c99672409189d79a 930 SUPERFAMILY SSF53098 325 519 3.59E-54 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_16960 631e04f079371b84c99672409189d79a 930 SUPERFAMILY SSF56672 526 930 1.11E-162 T 01-11-2018 D3790_05350 420661cc7067be4f6723bdfa20db398d 454 Gene3D G3DSA:1.20.1740.10 10 454 3.3E-60 T 01-11-2018 D3790_05350 420661cc7067be4f6723bdfa20db398d 454 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 01-11-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 D3790_05350 420661cc7067be4f6723bdfa20db398d 454 PIRSF PIRSF006060 1 453 1.6E-79 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D3790_05350 420661cc7067be4f6723bdfa20db398d 454 Pfam PF00324 Amino acid permease 19 451 9.8E-117 T 01-11-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 D3790_01110 1d5eb6d243e2ebe44d835166500affda 334 Gene3D G3DSA:3.30.450.90 1 100 8.6E-24 T 01-11-2018 D3790_01110 1d5eb6d243e2ebe44d835166500affda 334 Pfam PF00437 Type II/IV secretion system protein 13 265 1.6E-40 T 01-11-2018 IPR001482 Type II/IV secretion system protein D3790_01110 1d5eb6d243e2ebe44d835166500affda 334 SUPERFAMILY SSF52540 4 323 6.57E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_01110 1d5eb6d243e2ebe44d835166500affda 334 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 195 209 - T 01-11-2018 IPR001482 Type II/IV secretion system protein D3790_01110 1d5eb6d243e2ebe44d835166500affda 334 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 332 3.4E-127 T 01-11-2018 IPR006321 Pilus retraction protein PilT GO:0005524 D3790_01110 1d5eb6d243e2ebe44d835166500affda 334 Gene3D G3DSA:3.40.50.300 102 334 8.7E-85 T 01-11-2018 D3790_03000 790ee229908857cac18bf6b68c15eb8a 256 SUPERFAMILY SSF75217 1 246 2.04E-103 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases D3790_03000 790ee229908857cac18bf6b68c15eb8a 256 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.7E-69 T 01-11-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 D3790_03000 790ee229908857cac18bf6b68c15eb8a 256 Gene3D G3DSA:1.10.1270.20 161 254 2.9E-37 T 01-11-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 D3790_03000 790ee229908857cac18bf6b68c15eb8a 256 PIRSF PIRSF000386 1 253 1.6E-102 T 01-11-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 D3790_03000 790ee229908857cac18bf6b68c15eb8a 256 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 256 120.999 T 01-11-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 D3790_03000 790ee229908857cac18bf6b68c15eb8a 256 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 235 8.9E-111 T 01-11-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 D3790_03000 790ee229908857cac18bf6b68c15eb8a 256 Gene3D G3DSA:3.40.1280.10 1 160 6.1E-68 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D3790_19325 99b3f03468669dec0fad14988658804f 407 SUPERFAMILY SSF53649 1 406 2.62E-68 T 01-11-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D3790_19325 99b3f03468669dec0fad14988658804f 407 SUPERFAMILY SSF143856 117 235 3.92E-49 T 01-11-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 D3790_19325 99b3f03468669dec0fad14988658804f 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 405 1.4E-188 T 01-11-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 D3790_19325 99b3f03468669dec0fad14988658804f 407 Pfam PF01676 Metalloenzyme superfamily 2 398 3.8E-41 T 01-11-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 D3790_19325 99b3f03468669dec0fad14988658804f 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 55.397 T 01-11-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 D3790_19325 99b3f03468669dec0fad14988658804f 407 Gene3D G3DSA:3.30.70.1250 115 238 2.3E-152 T 01-11-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 D3790_19325 99b3f03468669dec0fad14988658804f 407 Gene3D G3DSA:3.40.720.10 3 405 2.3E-152 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D3790_19325 99b3f03468669dec0fad14988658804f 407 PIRSF PIRSF001491 1 407 4.6E-164 T 01-11-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 D3790_10250 e88f23cf66037bb20e1000a7208526ba 296 SUPERFAMILY SSF103481 187 280 1.44E-10 T 01-11-2018 D3790_10250 e88f23cf66037bb20e1000a7208526ba 296 SUPERFAMILY SSF103481 48 137 7.19E-7 T 01-11-2018 D3790_10250 e88f23cf66037bb20e1000a7208526ba 296 Pfam PF00892 EamA-like transporter family 150 280 1.0E-18 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D3790_18090 8657a42e51547a11b8296dd08a3b6104 125 SUPERFAMILY SSF110069 5 125 3.92E-48 T 01-11-2018 IPR036767 ApaG domain superfamily D3790_18090 8657a42e51547a11b8296dd08a3b6104 125 Gene3D G3DSA:2.60.40.1470 1 125 2.9E-46 T 01-11-2018 IPR036767 ApaG domain superfamily D3790_18090 8657a42e51547a11b8296dd08a3b6104 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 31.832 T 01-11-2018 IPR023065 Uncharacterised protein family ApaG D3790_18090 8657a42e51547a11b8296dd08a3b6104 125 Pfam PF04379 ApaG domain 18 102 1.2E-33 T 01-11-2018 IPR007474 ApaG domain D3790_00370 b1fcecd6b047034fe95c734ca7e18aad 1908 Gene3D G3DSA:2.160.20.10 31 324 1.2E-93 T 01-11-2018 IPR012334 Pectin lyase fold D3790_00370 b1fcecd6b047034fe95c734ca7e18aad 1908 SMART SM00912 45 165 8.6E-47 T 01-11-2018 IPR008638 Filamentous haemagglutinin, N-terminal D3790_00370 b1fcecd6b047034fe95c734ca7e18aad 1908 SUPERFAMILY SSF51126 40 295 1.76E-61 T 01-11-2018 IPR011050 Pectin lyase fold/virulence factor D3790_00370 b1fcecd6b047034fe95c734ca7e18aad 1908 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 63 160 7.5E-21 T 01-11-2018 IPR008638 Filamentous haemagglutinin, N-terminal D3790_00370 b1fcecd6b047034fe95c734ca7e18aad 1908 Pfam PF13930 DNA/RNA non-specific endonuclease 1767 1892 6.5E-32 T 01-11-2018 D3790_00370 b1fcecd6b047034fe95c734ca7e18aad 1908 Pfam PF05860 haemagglutination activity domain 38 164 2.1E-32 T 01-11-2018 IPR008638 Filamentous haemagglutinin, N-terminal D3790_00370 b1fcecd6b047034fe95c734ca7e18aad 1908 Pfam PF04830 Possible hemagglutinin (DUF637) 1368 1541 4.9E-47 T 01-11-2018 IPR006915 Domain of unknown function DUF637, haemagglutinin putative D3790_15680 3532e2b8ebf60deeb1fd08a9a89a6b1c 404 SUPERFAMILY SSF53901 279 402 4.65E-44 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_15680 3532e2b8ebf60deeb1fd08a9a89a6b1c 404 ProSitePatterns PS00099 Thiolases active site. 384 397 - T 01-11-2018 IPR020610 Thiolase, active site GO:0016747 D3790_15680 3532e2b8ebf60deeb1fd08a9a89a6b1c 404 SUPERFAMILY SSF53901 4 278 1.35E-79 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_15680 3532e2b8ebf60deeb1fd08a9a89a6b1c 404 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 4 403 2.1E-217 T 01-11-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 D3790_15680 3532e2b8ebf60deeb1fd08a9a89a6b1c 404 Pfam PF02803 Thiolase, C-terminal domain 279 402 3.6E-44 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 D3790_15680 3532e2b8ebf60deeb1fd08a9a89a6b1c 404 PIRSF PIRSF000429 1 404 5.2E-134 T 01-11-2018 IPR002155 Thiolase GO:0016747 D3790_15680 3532e2b8ebf60deeb1fd08a9a89a6b1c 404 ProSitePatterns PS00737 Thiolases signature 2. 349 365 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 D3790_15680 3532e2b8ebf60deeb1fd08a9a89a6b1c 404 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 401 5.4E-138 T 01-11-2018 IPR002155 Thiolase GO:0016747 D3790_15680 3532e2b8ebf60deeb1fd08a9a89a6b1c 404 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 01-11-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 D3790_15680 3532e2b8ebf60deeb1fd08a9a89a6b1c 404 Pfam PF00108 Thiolase, N-terminal domain 5 270 4.2E-76 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 D3790_15680 3532e2b8ebf60deeb1fd08a9a89a6b1c 404 Gene3D G3DSA:3.40.47.10 141 400 3.3E-156 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_15680 3532e2b8ebf60deeb1fd08a9a89a6b1c 404 Gene3D G3DSA:3.40.47.10 6 284 3.3E-156 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_18275 4165242cb7f5c46917fe76e47be6aedb 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.1E-20 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_18275 4165242cb7f5c46917fe76e47be6aedb 308 SUPERFAMILY SSF46785 3 87 1.33E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_18275 4165242cb7f5c46917fe76e47be6aedb 308 SUPERFAMILY SSF53850 93 294 6.88E-41 T 01-11-2018 D3790_18275 4165242cb7f5c46917fe76e47be6aedb 308 Gene3D G3DSA:3.40.190.10 103 289 3.7E-62 T 01-11-2018 D3790_18275 4165242cb7f5c46917fe76e47be6aedb 308 Pfam PF03466 LysR substrate binding domain 91 293 5.5E-40 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_18275 4165242cb7f5c46917fe76e47be6aedb 308 Gene3D G3DSA:3.40.190.10 163 263 3.7E-62 T 01-11-2018 D3790_18275 4165242cb7f5c46917fe76e47be6aedb 308 Gene3D G3DSA:1.10.10.10 7 94 1.2E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_18275 4165242cb7f5c46917fe76e47be6aedb 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.8E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_18275 4165242cb7f5c46917fe76e47be6aedb 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.8E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_18275 4165242cb7f5c46917fe76e47be6aedb 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.8E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_11235 c77453779f085c9a1ff556188e594aa0 482 Gene3D G3DSA:3.40.50.620 175 396 2.5E-53 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_11235 c77453779f085c9a1ff556188e594aa0 482 SUPERFAMILY SSF52402 174 372 2.43E-41 T 01-11-2018 D3790_11235 c77453779f085c9a1ff556188e594aa0 482 Gene3D G3DSA:3.30.2130.30 1 174 1.4E-36 T 01-11-2018 D3790_11235 c77453779f085c9a1ff556188e594aa0 482 SUPERFAMILY SSF143437 1 173 4.53E-51 T 01-11-2018 D3790_11235 c77453779f085c9a1ff556188e594aa0 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 383 481 4.5E-41 T 01-11-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 D3790_11235 c77453779f085c9a1ff556188e594aa0 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 3.9E-78 T 01-11-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 D3790_11235 c77453779f085c9a1ff556188e594aa0 482 SMART SM00981 75 165 6.8E-25 T 01-11-2018 IPR004114 THUMP domain GO:0003723 D3790_11235 c77453779f085c9a1ff556188e594aa0 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 225.434 T 01-11-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 D3790_11235 c77453779f085c9a1ff556188e594aa0 482 Gene3D G3DSA:3.40.250.10 397 482 1.3E-9 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily D3790_11235 c77453779f085c9a1ff556188e594aa0 482 Pfam PF02926 THUMP domain 29 161 1.8E-25 T 01-11-2018 IPR004114 THUMP domain GO:0003723 D3790_11235 c77453779f085c9a1ff556188e594aa0 482 SUPERFAMILY SSF52821 396 481 5.11E-11 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily D3790_11235 c77453779f085c9a1ff556188e594aa0 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 372 3.9E-128 T 01-11-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 D3790_10545 367e0db25d8b4493c3d2d1d7faa4cbc6 325 Pfam PF03186 CobD/Cbib protein 7 297 1.3E-103 T 01-11-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 D3790_10545 367e0db25d8b4493c3d2d1d7faa4cbc6 325 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 318 100.982 T 01-11-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 D3790_10545 367e0db25d8b4493c3d2d1d7faa4cbc6 325 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 5 275 3.4E-72 T 01-11-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 D3790_19560 2e93e8863f83dcc3cfaeb49937392fc4 332 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 114 188 1.2E-20 T 01-11-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 D3790_19560 2e93e8863f83dcc3cfaeb49937392fc4 332 Gene3D G3DSA:3.40.47.10 8 332 6.5E-78 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_19560 2e93e8863f83dcc3cfaeb49937392fc4 332 SUPERFAMILY SSF53901 10 330 1.77E-40 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_19560 2e93e8863f83dcc3cfaeb49937392fc4 332 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 243 330 1.1E-19 T 01-11-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 D3790_14995 10f9b21d9282299cb86fab5beeef72fa 200 SUPERFAMILY SSF53756 17 166 1.57E-9 T 01-11-2018 D3790_14995 10f9b21d9282299cb86fab5beeef72fa 200 Pfam PF13439 Glycosyltransferase Family 4 24 164 9.6E-9 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D3790_14995 10f9b21d9282299cb86fab5beeef72fa 200 Gene3D G3DSA:3.40.50.2000 17 178 4.7E-9 T 01-11-2018 D3790_10965 9d4d5121a17faf2cf8f9a4f5e4da258a 441 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 12 440 33.528 T 01-11-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 D3790_10965 9d4d5121a17faf2cf8f9a4f5e4da258a 441 SUPERFAMILY SSF51984 8 99 1.09E-22 T 01-11-2018 D3790_10965 9d4d5121a17faf2cf8f9a4f5e4da258a 441 Gene3D G3DSA:3.90.190.20 303 437 6.1E-44 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D3790_10965 9d4d5121a17faf2cf8f9a4f5e4da258a 441 Gene3D G3DSA:3.40.1190.10 99 302 1.1E-67 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D3790_10965 9d4d5121a17faf2cf8f9a4f5e4da258a 441 Pfam PF08245 Mur ligase middle domain 115 283 3.3E-23 T 01-11-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 D3790_10965 9d4d5121a17faf2cf8f9a4f5e4da258a 441 SUPERFAMILY SSF53623 100 300 2.22E-49 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D3790_10965 9d4d5121a17faf2cf8f9a4f5e4da258a 441 Pfam PF02875 Mur ligase family, glutamate ligase domain 304 366 1.4E-7 T 01-11-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 D3790_10965 9d4d5121a17faf2cf8f9a4f5e4da258a 441 Gene3D G3DSA:3.40.50.720 8 98 6.5E-23 T 01-11-2018 D3790_10965 9d4d5121a17faf2cf8f9a4f5e4da258a 441 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 13 438 5.5E-125 T 01-11-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 D3790_10965 9d4d5121a17faf2cf8f9a4f5e4da258a 441 SUPERFAMILY SSF53244 302 440 4.53E-48 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D3790_10495 6c5b145a063620acf31486ed24281b34 248 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 8 242 2.8E-75 T 01-11-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 D3790_10495 6c5b145a063620acf31486ed24281b34 248 Gene3D G3DSA:3.40.1010.10 5 137 3.9E-29 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 D3790_10495 6c5b145a063620acf31486ed24281b34 248 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 220 5.8E-46 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 D3790_10495 6c5b145a063620acf31486ed24281b34 248 Gene3D G3DSA:3.30.950.10 138 248 7.0E-16 T 01-11-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 D3790_10495 6c5b145a063620acf31486ed24281b34 248 PIRSF PIRSF036427 6 248 1.7E-71 T 01-11-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 D3790_10495 6c5b145a063620acf31486ed24281b34 248 SUPERFAMILY SSF53790 4 245 4.97E-47 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 D3790_03095 1bc5f422f4ee830fb4fc78d7d8162503 357 SUPERFAMILY SSF75217 200 355 1.05E-39 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases D3790_03095 1bc5f422f4ee830fb4fc78d7d8162503 357 SUPERFAMILY SSF55315 118 190 2.82E-9 T 01-11-2018 IPR029064 50S ribosomal protein L30e-like D3790_03095 1bc5f422f4ee830fb4fc78d7d8162503 357 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 121 192 9.5E-12 T 01-11-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 D3790_03095 1bc5f422f4ee830fb4fc78d7d8162503 357 Pfam PF00588 SpoU rRNA Methylase family 210 348 9.0E-31 T 01-11-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 D3790_03095 1bc5f422f4ee830fb4fc78d7d8162503 357 Gene3D G3DSA:3.40.1280.10 189 357 2.8E-43 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D3790_03095 1bc5f422f4ee830fb4fc78d7d8162503 357 PIRSF PIRSF006280 1 357 6.1E-153 T 01-11-2018 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 D3790_03095 1bc5f422f4ee830fb4fc78d7d8162503 357 SMART SM00967 120 195 7.3E-7 T 01-11-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 D3790_03940 3b1a0d14bd47132dc696a03faa160a5a 324 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 01-11-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 D3790_03940 3b1a0d14bd47132dc696a03faa160a5a 324 Gene3D G3DSA:3.20.20.70 1 242 1.9E-84 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_03940 3b1a0d14bd47132dc696a03faa160a5a 324 Gene3D G3DSA:1.20.225.30 243 313 5.1E-31 T 01-11-2018 D3790_03940 3b1a0d14bd47132dc696a03faa160a5a 324 PIRSF PIRSF006621 1 322 2.8E-80 T 01-11-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 D3790_03940 3b1a0d14bd47132dc696a03faa160a5a 324 Pfam PF01207 Dihydrouridine synthase (Dus) 5 299 1.1E-86 T 01-11-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 D3790_03940 3b1a0d14bd47132dc696a03faa160a5a 324 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 51.054 T 01-11-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 D3790_03940 3b1a0d14bd47132dc696a03faa160a5a 324 SUPERFAMILY SSF51395 1 304 1.48E-70 T 01-11-2018 D3790_04650 6dc0167e137b5e464fc95df4b1542528 123 Gene3D G3DSA:1.20.1260.10 6 119 8.3E-21 T 01-11-2018 IPR012347 Ferritin-like D3790_04650 6dc0167e137b5e464fc95df4b1542528 123 Pfam PF03713 Domain of unknown function (DUF305) 30 116 1.1E-20 T 01-11-2018 IPR005183 Domain of unknown function DUF305 D3790_08145 ae43bcf2b85935869f7002c0368c6ec0 192 Gene3D G3DSA:1.10.287.990 20 82 1.6E-26 T 01-11-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_08145 ae43bcf2b85935869f7002c0368c6ec0 192 Gene3D G3DSA:2.40.500.20 83 192 4.2E-44 T 01-11-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_08145 ae43bcf2b85935869f7002c0368c6ec0 192 SUPERFAMILY SSF54719 82 191 9.56E-44 T 01-11-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_08145 ae43bcf2b85935869f7002c0368c6ec0 192 PIRSF PIRSF000349 1 192 7.5E-86 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_08145 ae43bcf2b85935869f7002c0368c6ec0 192 SUPERFAMILY SSF46609 1 84 6.02E-36 T 01-11-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_08145 ae43bcf2b85935869f7002c0368c6ec0 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 5.9E-41 T 01-11-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_08145 ae43bcf2b85935869f7002c0368c6ec0 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.7E-22 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_08145 ae43bcf2b85935869f7002c0368c6ec0 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.7E-22 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_08145 ae43bcf2b85935869f7002c0368c6ec0 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.7E-22 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_08145 ae43bcf2b85935869f7002c0368c6ec0 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.7E-22 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_08145 ae43bcf2b85935869f7002c0368c6ec0 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 1.7E-22 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_08145 ae43bcf2b85935869f7002c0368c6ec0 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 01-11-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_08145 ae43bcf2b85935869f7002c0368c6ec0 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 5.5E-35 T 01-11-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_04075 079a210df4d3f82863475afbdfb761be 273 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 31 268 6.0E-57 T 01-11-2018 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 D3790_04075 079a210df4d3f82863475afbdfb761be 273 SUPERFAMILY SSF110710 7 269 4.18E-61 T 01-11-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like D3790_02415 787d604f85c8be6126402449243a9c7b 142 SMART SM00562 3 140 1.5E-87 T 01-11-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D3790_02415 787d604f85c8be6126402449243a9c7b 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.2E-40 T 01-11-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D3790_02415 787d604f85c8be6126402449243a9c7b 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 4.2E-40 T 01-11-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D3790_02415 787d604f85c8be6126402449243a9c7b 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 4.2E-40 T 01-11-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D3790_02415 787d604f85c8be6126402449243a9c7b 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 4.2E-40 T 01-11-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D3790_02415 787d604f85c8be6126402449243a9c7b 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.2E-40 T 01-11-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D3790_02415 787d604f85c8be6126402449243a9c7b 142 Gene3D G3DSA:3.30.70.141 2 141 1.9E-59 T 01-11-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D3790_02415 787d604f85c8be6126402449243a9c7b 142 SUPERFAMILY SSF54919 1 140 3.93E-60 T 01-11-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D3790_02415 787d604f85c8be6126402449243a9c7b 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.868 T 01-11-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D3790_02415 787d604f85c8be6126402449243a9c7b 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 01-11-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D3790_02415 787d604f85c8be6126402449243a9c7b 142 Pfam PF00334 Nucleoside diphosphate kinase 4 138 8.4E-57 T 01-11-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D3790_11910 815fba06bc985309aaebe001fcba610c 615 Pfam PF13721 SecD export protein N-terminal TM region 2 103 6.0E-37 T 01-11-2018 IPR027398 SecD export protein N-terminal TM domain D3790_11910 815fba06bc985309aaebe001fcba610c 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 594 2.6E-84 T 01-11-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D3790_11910 815fba06bc985309aaebe001fcba610c 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 601 8.0E-151 T 01-11-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 D3790_11910 815fba06bc985309aaebe001fcba610c 615 Gene3D G3DSA:3.30.70.3400 222 437 1.1E-48 T 01-11-2018 D3790_11910 815fba06bc985309aaebe001fcba610c 615 Pfam PF07549 SecD/SecF GG Motif 120 139 1.3E-5 T 01-11-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site D3790_11910 815fba06bc985309aaebe001fcba610c 615 Pfam PF02355 Protein export membrane protein 433 601 5.0E-16 T 01-11-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial D3790_11910 815fba06bc985309aaebe001fcba610c 615 SUPERFAMILY SSF82866 328 606 8.76E-42 T 01-11-2018 D3790_11910 815fba06bc985309aaebe001fcba610c 615 Gene3D G3DSA:3.30.1360.200 278 431 1.1E-48 T 01-11-2018 D3790_11910 815fba06bc985309aaebe001fcba610c 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 615 48.289 T 01-11-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 D3790_09290 1ee331ddaae0ce502ed3b2e84dc2042b 330 Pfam PF01706 FliG C-terminal domain 217 322 5.9E-37 T 01-11-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal D3790_09290 1ee331ddaae0ce502ed3b2e84dc2042b 330 SUPERFAMILY SSF48029 113 323 1.15E-62 T 01-11-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical D3790_09290 1ee331ddaae0ce502ed3b2e84dc2042b 330 Gene3D G3DSA:1.10.220.30 193 330 3.5E-41 T 01-11-2018 D3790_09290 1ee331ddaae0ce502ed3b2e84dc2042b 330 Gene3D G3DSA:1.10.220.30 1 82 1.1E-18 T 01-11-2018 D3790_09290 1ee331ddaae0ce502ed3b2e84dc2042b 330 Pfam PF14842 FliG N-terminal domain 3 102 5.6E-30 T 01-11-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain D3790_09290 1ee331ddaae0ce502ed3b2e84dc2042b 330 Pfam PF14841 FliG middle domain 114 186 2.4E-24 T 01-11-2018 IPR032779 Flagellar motor switch protein FliG, middle domain D3790_09290 1ee331ddaae0ce502ed3b2e84dc2042b 330 Gene3D G3DSA:1.10.220.30 89 191 1.4E-25 T 01-11-2018 D3790_09290 1ee331ddaae0ce502ed3b2e84dc2042b 330 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 330 2.4E-135 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 D3790_09290 1ee331ddaae0ce502ed3b2e84dc2042b 330 SUPERFAMILY SSF48029 4 103 1.8E-20 T 01-11-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical D3790_09290 1ee331ddaae0ce502ed3b2e84dc2042b 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 1.6E-69 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 D3790_09290 1ee331ddaae0ce502ed3b2e84dc2042b 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 193 218 1.6E-69 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 D3790_09290 1ee331ddaae0ce502ed3b2e84dc2042b 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 224 244 1.6E-69 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 D3790_09290 1ee331ddaae0ce502ed3b2e84dc2042b 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 1.6E-69 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 D3790_09290 1ee331ddaae0ce502ed3b2e84dc2042b 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 113 136 1.6E-69 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 D3790_09290 1ee331ddaae0ce502ed3b2e84dc2042b 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 1.6E-69 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 D3790_09290 1ee331ddaae0ce502ed3b2e84dc2042b 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 270 296 1.6E-69 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 D3790_09290 1ee331ddaae0ce502ed3b2e84dc2042b 330 PIRSF PIRSF003161 1 330 9.7E-114 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 D3790_06390 c057c57fec4207a3da6bba83bdfbbc59 213 Gene3D G3DSA:2.40.160.20 22 213 5.0E-76 T 01-11-2018 D3790_06390 c057c57fec4207a3da6bba83bdfbbc59 213 SUPERFAMILY SSF56925 23 213 2.25E-29 T 01-11-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D3790_06390 c057c57fec4207a3da6bba83bdfbbc59 213 Pfam PF03922 OmpW family 23 213 1.2E-64 T 01-11-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 D3790_13550 b203d30f9b3b372d7d804271a895ef5c 75 Pfam PF01084 Ribosomal protein S18 19 68 2.3E-25 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13550 b203d30f9b3b372d7d804271a895ef5c 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 01-11-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13550 b203d30f9b3b372d7d804271a895ef5c 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 2.1E-18 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13550 b203d30f9b3b372d7d804271a895ef5c 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 2.1E-18 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13550 b203d30f9b3b372d7d804271a895ef5c 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 2.1E-18 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13550 b203d30f9b3b372d7d804271a895ef5c 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 2.1E-18 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13550 b203d30f9b3b372d7d804271a895ef5c 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 1.6E-37 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13550 b203d30f9b3b372d7d804271a895ef5c 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 5.0E-22 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13550 b203d30f9b3b372d7d804271a895ef5c 75 SUPERFAMILY SSF46911 3 74 8.24E-29 T 01-11-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13550 b203d30f9b3b372d7d804271a895ef5c 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.207 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13550 b203d30f9b3b372d7d804271a895ef5c 75 Gene3D G3DSA:4.10.640.10 20 75 1.9E-29 T 01-11-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_08150 871fec30e78103a4e6d366093716b71d 341 Gene3D G3DSA:1.10.260.40 3 59 1.1E-25 T 01-11-2018 D3790_08150 871fec30e78103a4e6d366093716b71d 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.2E-6 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D3790_08150 871fec30e78103a4e6d366093716b71d 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.2E-6 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D3790_08150 871fec30e78103a4e6d366093716b71d 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 01-11-2018 D3790_08150 871fec30e78103a4e6d366093716b71d 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 62.22 T 01-11-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 D3790_08150 871fec30e78103a4e6d366093716b71d 341 Gene3D G3DSA:3.40.50.2300 69 323 1.1E-101 T 01-11-2018 D3790_08150 871fec30e78103a4e6d366093716b71d 341 SUPERFAMILY SSF47413 1 59 5.63E-17 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_08150 871fec30e78103a4e6d366093716b71d 341 SMART SM00354 1 71 1.4E-36 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D3790_08150 871fec30e78103a4e6d366093716b71d 341 Gene3D G3DSA:3.40.50.2300 162 324 1.1E-101 T 01-11-2018 D3790_08150 871fec30e78103a4e6d366093716b71d 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 5.1E-19 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D3790_08150 871fec30e78103a4e6d366093716b71d 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 9.8E-41 T 01-11-2018 D3790_08150 871fec30e78103a4e6d366093716b71d 341 SUPERFAMILY SSF53822 60 337 1.51E-96 T 01-11-2018 IPR028082 Periplasmic binding protein-like I D3790_05370 559432235b5b061db7edacc65217ef87 458 Pfam PF01136 Peptidase family U32 75 343 1.7E-97 T 01-11-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 D3790_05370 559432235b5b061db7edacc65217ef87 458 Pfam PF16325 Peptidase family U32 C-terminal domain 359 440 4.4E-21 T 01-11-2018 IPR032525 Peptidase family U32, C-terminal D3790_05370 559432235b5b061db7edacc65217ef87 458 Gene3D G3DSA:2.40.30.10 355 441 8.1E-11 T 01-11-2018 D3790_05370 559432235b5b061db7edacc65217ef87 458 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 01-11-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 D3790_13675 d77763e02c3020e95c56e2a9c21d1719 1126 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 709 879 2.3E-16 T 01-11-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 D3790_13675 d77763e02c3020e95c56e2a9c21d1719 1126 SUPERFAMILY SSF52518 413 546 1.74E-8 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_13675 d77763e02c3020e95c56e2a9c21d1719 1126 Gene3D G3DSA:3.40.50.970 3 204 3.1E-19 T 01-11-2018 D3790_13675 d77763e02c3020e95c56e2a9c21d1719 1126 SUPERFAMILY SSF53323 701 940 1.14E-17 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 D3790_13675 d77763e02c3020e95c56e2a9c21d1719 1126 Gene3D G3DSA:3.40.920.10 697 905 1.6E-14 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 D3790_13675 d77763e02c3020e95c56e2a9c21d1719 1126 SUPERFAMILY SSF52518 10 184 3.65E-15 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_01055 7449f3d536d865f8618f464149409550 815 Gene3D G3DSA:2.40.110.10 236 359 5.9E-101 T 01-11-2018 D3790_01055 7449f3d536d865f8618f464149409550 815 Gene3D G3DSA:1.20.140.10 360 507 5.9E-101 T 01-11-2018 D3790_01055 7449f3d536d865f8618f464149409550 815 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 328 7.8E-10 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 D3790_01055 7449f3d536d865f8618f464149409550 815 SUPERFAMILY SSF47203 360 507 3.06E-20 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 D3790_01055 7449f3d536d865f8618f464149409550 815 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 2.1E-116 T 01-11-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 D3790_01055 7449f3d536d865f8618f464149409550 815 SUPERFAMILY SSF56645 119 355 1.44E-46 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 D3790_01055 7449f3d536d865f8618f464149409550 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 507 9.3E-10 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 D3790_01055 7449f3d536d865f8618f464149409550 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 233 5.2E-16 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 D3790_01055 7449f3d536d865f8618f464149409550 815 Gene3D G3DSA:1.10.540.10 122 235 5.9E-101 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 D3790_13800 8f5deb7b6c241f869a84f2e76540075d 239 Pfam PF04340 Protein of unknown function, DUF484 17 236 1.4E-61 T 01-11-2018 IPR007435 Protein of unknown function DUF484 D3790_13800 8f5deb7b6c241f869a84f2e76540075d 239 Gene3D G3DSA:3.30.450.40 54 237 3.6E-31 T 01-11-2018 IPR029016 GAF-like domain superfamily D3790_09245 c6ad6d789c0d753a0f04dd0af4f3499f 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_09245 c6ad6d789c0d753a0f04dd0af4f3499f 240 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 4.5E-85 T 01-11-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 D3790_09245 c6ad6d789c0d753a0f04dd0af4f3499f 240 SUPERFAMILY SSF88659 158 238 3.92E-21 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D3790_09245 c6ad6d789c0d753a0f04dd0af4f3499f 240 Gene3D G3DSA:1.10.1740.10 4 85 2.0E-27 T 01-11-2018 D3790_09245 c6ad6d789c0d753a0f04dd0af4f3499f 240 PIRSF PIRSF000770 3 240 2.4E-39 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_09245 c6ad6d789c0d753a0f04dd0af4f3499f 240 Pfam PF04545 Sigma-70, region 4 186 234 7.1E-18 T 01-11-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 D3790_09245 c6ad6d789c0d753a0f04dd0af4f3499f 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 4.7E-32 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D3790_09245 c6ad6d789c0d753a0f04dd0af4f3499f 240 Pfam PF04539 Sigma-70 region 3 97 168 2.0E-16 T 01-11-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 D3790_09245 c6ad6d789c0d753a0f04dd0af4f3499f 240 Gene3D G3DSA:1.20.140.160 87 238 4.3E-46 T 01-11-2018 D3790_09245 c6ad6d789c0d753a0f04dd0af4f3499f 240 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 60.635 T 01-11-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 D3790_09245 c6ad6d789c0d753a0f04dd0af4f3499f 240 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_09245 c6ad6d789c0d753a0f04dd0af4f3499f 240 Pfam PF04542 Sigma-70 region 2 16 88 1.7E-16 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D3790_09245 c6ad6d789c0d753a0f04dd0af4f3499f 240 PRINTS PR00046 Major sigma-70 factor signature 221 232 6.4E-14 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_09245 c6ad6d789c0d753a0f04dd0af4f3499f 240 PRINTS PR00046 Major sigma-70 factor signature 43 56 6.4E-14 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_09245 c6ad6d789c0d753a0f04dd0af4f3499f 240 PRINTS PR00046 Major sigma-70 factor signature 67 75 6.4E-14 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_09245 c6ad6d789c0d753a0f04dd0af4f3499f 240 PRINTS PR00046 Major sigma-70 factor signature 189 201 6.4E-14 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_09245 c6ad6d789c0d753a0f04dd0af4f3499f 240 PRINTS PR00046 Major sigma-70 factor signature 206 221 6.4E-14 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_09245 c6ad6d789c0d753a0f04dd0af4f3499f 240 SUPERFAMILY SSF88946 5 88 1.57E-23 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D3790_09245 c6ad6d789c0d753a0f04dd0af4f3499f 240 SUPERFAMILY SSF88659 90 152 4.19E-14 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D3790_11705 8974efeaeafe45be6892dc5e73102089 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 01-11-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria D3790_11705 8974efeaeafe45be6892dc5e73102089 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 01-11-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria D3790_11705 8974efeaeafe45be6892dc5e73102089 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 4.9E-51 T 01-11-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 D3790_11705 8974efeaeafe45be6892dc5e73102089 151 Gene3D G3DSA:1.20.120.910 22 150 7.4E-36 T 01-11-2018 D3790_11705 8974efeaeafe45be6892dc5e73102089 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 30.051 T 01-11-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 D3790_11705 8974efeaeafe45be6892dc5e73102089 151 SUPERFAMILY SSF57716 111 149 4.56E-10 T 01-11-2018 D3790_11705 8974efeaeafe45be6892dc5e73102089 151 SUPERFAMILY SSF109635 9 110 3.14E-37 T 01-11-2018 IPR037187 DksA, N-terminal domain superfamily D3790_11705 8974efeaeafe45be6892dc5e73102089 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 111 143 2.3E-10 T 01-11-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 D3790_11705 8974efeaeafe45be6892dc5e73102089 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 01-11-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site D3790_04925 f5082e5f9e95868dad22c0077e9a5767 541 Gene3D G3DSA:1.20.1560.10 1 307 5.9E-20 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_04925 f5082e5f9e95868dad22c0077e9a5767 541 Pfam PF00664 ABC transporter transmembrane region 15 253 9.3E-7 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D3790_04925 f5082e5f9e95868dad22c0077e9a5767 541 SUPERFAMILY SSF90123 7 304 3.14E-25 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_04925 f5082e5f9e95868dad22c0077e9a5767 541 Gene3D G3DSA:3.40.50.300 322 540 3.0E-39 T 01-11-2018 D3790_04925 f5082e5f9e95868dad22c0077e9a5767 541 ProSitePatterns PS00211 ABC transporters family signature. 456 470 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_04925 f5082e5f9e95868dad22c0077e9a5767 541 SMART SM00382 356 532 2.1E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_04925 f5082e5f9e95868dad22c0077e9a5767 541 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 4 533 1.1E-135 T 01-11-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015833|GO:0016021|GO:1904680 D3790_04925 f5082e5f9e95868dad22c0077e9a5767 541 Pfam PF00005 ABC transporter 349 483 1.0E-25 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_04925 f5082e5f9e95868dad22c0077e9a5767 541 SUPERFAMILY SSF52540 316 536 4.61E-41 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_04565 8a5400d44db1a8af9555f941a7141f50 88 Gene3D G3DSA:3.10.20.30 1 88 7.7E-17 T 01-11-2018 IPR012675 Beta-grasp domain superfamily D3790_04565 8a5400d44db1a8af9555f941a7141f50 88 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 01-11-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 D3790_04565 8a5400d44db1a8af9555f941a7141f50 88 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 80 9.8E-12 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 D3790_04565 8a5400d44db1a8af9555f941a7141f50 88 SUPERFAMILY SSF54292 15 88 3.15E-19 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D3790_17490 ff0b6652ebf7cab0e6af90dd161eda1b 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 1.7E-20 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like D3790_17490 ff0b6652ebf7cab0e6af90dd161eda1b 90 SUPERFAMILY SSF55594 4 90 4.45E-24 T 01-11-2018 IPR035895 HPr-like superfamily D3790_17490 ff0b6652ebf7cab0e6af90dd161eda1b 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 7.8E-22 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like D3790_17490 ff0b6652ebf7cab0e6af90dd161eda1b 90 Gene3D G3DSA:3.30.1340.10 1 85 7.7E-28 T 01-11-2018 IPR035895 HPr-like superfamily D3790_17490 ff0b6652ebf7cab0e6af90dd161eda1b 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 1.2E-7 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like D3790_17490 ff0b6652ebf7cab0e6af90dd161eda1b 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 1.2E-7 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like D3790_17490 ff0b6652ebf7cab0e6af90dd161eda1b 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 1.2E-7 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like D3790_17490 ff0b6652ebf7cab0e6af90dd161eda1b 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 01-11-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site D3790_07605 85b4c99d912bf70f8131c837e9b5f595 284 SUPERFAMILY SSF51569 3 278 2.84E-104 T 01-11-2018 D3790_07605 85b4c99d912bf70f8131c837e9b5f595 284 Gene3D G3DSA:3.20.20.70 1 284 9.7E-100 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_07605 85b4c99d912bf70f8131c837e9b5f595 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 4.6E-119 T 01-11-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 D3790_07605 85b4c99d912bf70f8131c837e9b5f595 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.839 T 01-11-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 D3790_07605 85b4c99d912bf70f8131c837e9b5f595 284 Pfam PF00793 DAHP synthetase I family 10 273 3.4E-67 T 01-11-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 D3790_16320 799d01d8b3e843e5c34287f04b4fd631 447 Gene3D G3DSA:3.40.50.720 209 373 2.2E-173 T 01-11-2018 D3790_16320 799d01d8b3e843e5c34287f04b4fd631 447 PIRSF PIRSF000185 22 447 3.6E-110 T 01-11-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 D3790_16320 799d01d8b3e843e5c34287f04b4fd631 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 184 1.4E-49 T 01-11-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 D3790_16320 799d01d8b3e843e5c34287f04b4fd631 447 Gene3D G3DSA:1.10.285.10 14 374 2.2E-173 T 01-11-2018 D3790_16320 799d01d8b3e843e5c34287f04b4fd631 447 SUPERFAMILY SSF51735 202 446 2.98E-74 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_16320 799d01d8b3e843e5c34287f04b4fd631 447 SUPERFAMILY SSF53223 10 196 2.24E-73 T 01-11-2018 D3790_16320 799d01d8b3e843e5c34287f04b4fd631 447 Gene3D G3DSA:1.10.285.10 401 447 7.1E-11 T 01-11-2018 D3790_16320 799d01d8b3e843e5c34287f04b4fd631 447 SMART SM00839 204 445 6.1E-91 T 01-11-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 D3790_16320 799d01d8b3e843e5c34287f04b4fd631 447 Gene3D G3DSA:3.40.50.10860 55 190 2.2E-173 T 01-11-2018 D3790_16320 799d01d8b3e843e5c34287f04b4fd631 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 1.6E-83 T 01-11-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 D3790_16320 799d01d8b3e843e5c34287f04b4fd631 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 1.6E-31 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 D3790_16320 799d01d8b3e843e5c34287f04b4fd631 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 1.6E-31 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 D3790_16320 799d01d8b3e843e5c34287f04b4fd631 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 1.6E-31 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 D3790_16320 799d01d8b3e843e5c34287f04b4fd631 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 1.6E-31 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 D3790_16320 799d01d8b3e843e5c34287f04b4fd631 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 01-11-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 D3790_14775 7b12dde9ae40403dbed7efd99e8b12cf 160 SUPERFAMILY SSF52374 2 157 6.7E-43 T 01-11-2018 D3790_14775 7b12dde9ae40403dbed7efd99e8b12cf 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 34.869 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D3790_14775 7b12dde9ae40403dbed7efd99e8b12cf 160 Gene3D G3DSA:3.40.50.620 1 160 7.8E-56 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_14775 7b12dde9ae40403dbed7efd99e8b12cf 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.0E-46 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D3790_14775 7b12dde9ae40403dbed7efd99e8b12cf 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.0E-46 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D3790_14775 7b12dde9ae40403dbed7efd99e8b12cf 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.0E-46 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D3790_14775 7b12dde9ae40403dbed7efd99e8b12cf 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.0E-46 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D3790_14775 7b12dde9ae40403dbed7efd99e8b12cf 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.0E-46 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D3790_14775 7b12dde9ae40403dbed7efd99e8b12cf 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 2.1E-58 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D3790_14775 7b12dde9ae40403dbed7efd99e8b12cf 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 64 9.9E-17 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D3790_14775 7b12dde9ae40403dbed7efd99e8b12cf 160 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 77 2.0E-4 T 01-11-2018 D3790_14775 7b12dde9ae40403dbed7efd99e8b12cf 160 Pfam PF01467 Cytidylyltransferase-like 6 133 4.1E-22 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D3790_11335 1443789743be8a85a18db4215c3cc5c1 96 PRINTS PR01727 Prokaryotic integration host factor signature 79 93 2.6E-20 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_11335 1443789743be8a85a18db4215c3cc5c1 96 PRINTS PR01727 Prokaryotic integration host factor signature 63 76 2.6E-20 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_11335 1443789743be8a85a18db4215c3cc5c1 96 PRINTS PR01727 Prokaryotic integration host factor signature 45 60 2.6E-20 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_11335 1443789743be8a85a18db4215c3cc5c1 96 Pfam PF00216 Bacterial DNA-binding protein 6 95 8.3E-34 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_11335 1443789743be8a85a18db4215c3cc5c1 96 SMART SM00411 6 95 1.6E-44 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_11335 1443789743be8a85a18db4215c3cc5c1 96 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 51 70 - T 01-11-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 D3790_11335 1443789743be8a85a18db4215c3cc5c1 96 SUPERFAMILY SSF47729 6 95 1.19E-32 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D3790_11335 1443789743be8a85a18db4215c3cc5c1 96 Gene3D G3DSA:4.10.520.10 6 95 1.3E-36 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D3790_09070 4284e3b6b7a3f4dc1e9e16741fa8acad 103 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 63 95 2.6E-6 T 01-11-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 D3790_09070 4284e3b6b7a3f4dc1e9e16741fa8acad 103 Gene3D G3DSA:1.20.120.910 32 99 1.8E-14 T 01-11-2018 D3790_09070 4284e3b6b7a3f4dc1e9e16741fa8acad 103 SUPERFAMILY SSF57716 63 99 1.43E-7 T 01-11-2018 D3790_01360 e6071e968b4dd81a3f2b8788df89040e 263 Gene3D G3DSA:3.40.50.720 2 262 7.9E-40 T 01-11-2018 D3790_01360 e6071e968b4dd81a3f2b8788df89040e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 4.1E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_01360 e6071e968b4dd81a3f2b8788df89040e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 4.1E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_01360 e6071e968b4dd81a3f2b8788df89040e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.1E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_01360 e6071e968b4dd81a3f2b8788df89040e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 4.1E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_01360 e6071e968b4dd81a3f2b8788df89040e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 4.1E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_01360 e6071e968b4dd81a3f2b8788df89040e 263 SUPERFAMILY SSF51735 3 219 8.71E-38 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_01360 e6071e968b4dd81a3f2b8788df89040e 263 Pfam PF00106 short chain dehydrogenase 4 190 6.1E-29 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_14255 0f03af20cae7f74b6cf726fe2c4e3435 210 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 205 6.3E-92 T 01-11-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14255 0f03af20cae7f74b6cf726fe2c4e3435 210 Pfam PF00297 Ribosomal protein L3 29 183 4.6E-16 T 01-11-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14255 0f03af20cae7f74b6cf726fe2c4e3435 210 Gene3D G3DSA:2.40.50.620 31 97 1.2E-15 T 01-11-2018 D3790_14255 0f03af20cae7f74b6cf726fe2c4e3435 210 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 01-11-2018 IPR019926 Ribosomal protein L3, conserved site D3790_14255 0f03af20cae7f74b6cf726fe2c4e3435 210 SUPERFAMILY SSF50447 1 209 3.97E-81 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily D3790_14255 0f03af20cae7f74b6cf726fe2c4e3435 210 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 208 40.557 T 01-11-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14255 0f03af20cae7f74b6cf726fe2c4e3435 210 Gene3D G3DSA:2.40.30.10 129 210 6.6E-19 T 01-11-2018 D3790_03745 cd2f876891df4256fa3925d15e8ff3b7 256 Pfam PF13174 Tetratricopeptide repeat 211 243 7.1E-8 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D3790_03745 cd2f876891df4256fa3925d15e8ff3b7 256 Pfam PF13432 Tetratricopeptide repeat 144 206 3.1E-7 T 01-11-2018 D3790_03745 cd2f876891df4256fa3925d15e8ff3b7 256 Pfam PF16331 TolA binding protein trimerisation 37 107 6.0E-24 T 01-11-2018 IPR032519 YbgF, trimerisation domain GO:0070206 D3790_03745 cd2f876891df4256fa3925d15e8ff3b7 256 Gene3D G3DSA:1.20.5.110 35 115 1.4E-30 T 01-11-2018 D3790_03745 cd2f876891df4256fa3925d15e8ff3b7 256 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 6 256 19.652 T 01-11-2018 IPR034706 Cell division coordinator CpoB GO:0051301 D3790_03745 cd2f876891df4256fa3925d15e8ff3b7 256 Gene3D G3DSA:1.25.40.10 134 256 2.4E-28 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_03745 cd2f876891df4256fa3925d15e8ff3b7 256 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 137 252 3.2E-41 T 01-11-2018 IPR014162 Cell division coordinator CpoB, C-terminal D3790_03745 cd2f876891df4256fa3925d15e8ff3b7 256 SUPERFAMILY SSF48452 146 247 5.96E-13 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_14125 99d011da825abd8cfa77151954a11cc8 130 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 01-11-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14125 99d011da825abd8cfa77151954a11cc8 130 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 7.3E-51 T 01-11-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14125 99d011da825abd8cfa77151954a11cc8 130 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.022 T 01-11-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14125 99d011da825abd8cfa77151954a11cc8 130 SUPERFAMILY SSF64263 1 118 4.84E-51 T 01-11-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14125 99d011da825abd8cfa77151954a11cc8 130 Pfam PF01196 Ribosomal protein L17 20 116 1.4E-34 T 01-11-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14125 99d011da825abd8cfa77151954a11cc8 130 Gene3D G3DSA:3.90.1030.10 1 117 3.5E-48 T 01-11-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13115 db9741ed9400db43b34d007af9fb7527 308 Pfam PF03466 LysR substrate binding domain 90 294 3.8E-37 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_13115 db9741ed9400db43b34d007af9fb7527 308 Gene3D G3DSA:3.40.190.10 95 291 1.7E-60 T 01-11-2018 D3790_13115 db9741ed9400db43b34d007af9fb7527 308 SUPERFAMILY SSF46785 7 114 2.33E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_13115 db9741ed9400db43b34d007af9fb7527 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 4.5E-17 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_13115 db9741ed9400db43b34d007af9fb7527 308 Gene3D G3DSA:1.10.10.10 6 94 9.6E-26 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_13115 db9741ed9400db43b34d007af9fb7527 308 Gene3D G3DSA:3.40.190.10 166 266 1.7E-60 T 01-11-2018 D3790_13115 db9741ed9400db43b34d007af9fb7527 308 SUPERFAMILY SSF53850 91 296 1.45E-40 T 01-11-2018 D3790_05030 f4a08a3bbd3451fd6317d749dc63bbde 262 SUPERFAMILY SSF52540 5 229 2.61E-53 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05030 f4a08a3bbd3451fd6317d749dc63bbde 262 SMART SM00382 30 215 1.7E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_05030 f4a08a3bbd3451fd6317d749dc63bbde 262 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_05030 f4a08a3bbd3451fd6317d749dc63bbde 262 Pfam PF00005 ABC transporter 27 165 5.2E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_05030 f4a08a3bbd3451fd6317d749dc63bbde 262 Gene3D G3DSA:3.40.50.300 4 254 2.5E-61 T 01-11-2018 D3790_14120 f0c9d8c5229fdc2403a3e3fb1837ebdf 137 SMART SM00422 2 71 1.2E-31 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D3790_14120 f0c9d8c5229fdc2403a3e3fb1837ebdf 137 Gene3D G3DSA:1.10.1660.10 1 128 2.6E-36 T 01-11-2018 D3790_14120 f0c9d8c5229fdc2403a3e3fb1837ebdf 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 2.0E-14 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D3790_14120 f0c9d8c5229fdc2403a3e3fb1837ebdf 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.0E-14 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D3790_14120 f0c9d8c5229fdc2403a3e3fb1837ebdf 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 2.0E-14 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D3790_14120 f0c9d8c5229fdc2403a3e3fb1837ebdf 137 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 1.9E-63 T 01-11-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 D3790_14120 f0c9d8c5229fdc2403a3e3fb1837ebdf 137 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D3790_14120 f0c9d8c5229fdc2403a3e3fb1837ebdf 137 SUPERFAMILY SSF46955 2 121 7.33E-34 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily D3790_14120 f0c9d8c5229fdc2403a3e3fb1837ebdf 137 Pfam PF13411 MerR HTH family regulatory protein 2 68 7.0E-22 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D3790_15430 c97b966b99122afd65b130f11b747f4e 206 SUPERFAMILY SSF53335 2 204 2.94E-39 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_15430 c97b966b99122afd65b130f11b747f4e 206 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 202 28.016 T 01-11-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 D3790_15430 c97b966b99122afd65b130f11b747f4e 206 Gene3D G3DSA:3.40.50.150 1 206 6.7E-69 T 01-11-2018 D3790_15430 c97b966b99122afd65b130f11b747f4e 206 Pfam PF02527 rRNA small subunit methyltransferase G 20 201 4.0E-60 T 01-11-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 D3790_15430 c97b966b99122afd65b130f11b747f4e 206 PIRSF PIRSF003078 1 206 2.1E-60 T 01-11-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 D3790_15430 c97b966b99122afd65b130f11b747f4e 206 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 204 6.1E-55 T 01-11-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 D3790_13105 8a94bf686a5ebf50c73cf62376ec0297 514 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 55 498 8.1E-145 T 01-11-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 D3790_13105 8a94bf686a5ebf50c73cf62376ec0297 514 ProSitePatterns PS01303 BCCT family of transporters signature. 311 320 - T 01-11-2018 IPR018093 BCCT transporter, conserved site D3790_13105 8a94bf686a5ebf50c73cf62376ec0297 514 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 12 497 2.5E-113 T 01-11-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 D3790_17255 a7cd17c8dbd9bb4aa1e597b9c3748cd9 418 Gene3D G3DSA:3.30.160.390 1 102 7.7E-36 T 01-11-2018 IPR038488 Integrase, DNA-binding domain superfamily D3790_17255 a7cd17c8dbd9bb4aa1e597b9c3748cd9 418 Pfam PF00589 Phage integrase family 225 385 2.5E-14 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D3790_17255 a7cd17c8dbd9bb4aa1e597b9c3748cd9 418 Gene3D G3DSA:1.10.150.130 103 180 5.4E-23 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal D3790_17255 a7cd17c8dbd9bb4aa1e597b9c3748cd9 418 SUPERFAMILY SSF56349 99 388 2.35E-42 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_17255 a7cd17c8dbd9bb4aa1e597b9c3748cd9 418 Pfam PF13356 Arm DNA-binding domain 3 89 9.6E-21 T 01-11-2018 IPR025166 Integrase, DNA-binding domain D3790_17255 a7cd17c8dbd9bb4aa1e597b9c3748cd9 418 Gene3D G3DSA:1.10.443.10 211 413 1.2E-11 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_19140 5ef4b8f9366e55d60e6b72e21956dfde 254 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 2 250 38.485 T 01-11-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 D3790_19140 5ef4b8f9366e55d60e6b72e21956dfde 254 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 3 233 1.2E-70 T 01-11-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 D3790_19140 5ef4b8f9366e55d60e6b72e21956dfde 254 SUPERFAMILY SSF64167 2 247 2.35E-79 T 01-11-2018 D3790_19140 5ef4b8f9366e55d60e6b72e21956dfde 254 Gene3D G3DSA:3.40.1210.10 1 253 1.1E-97 T 01-11-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 D3790_19140 5ef4b8f9366e55d60e6b72e21956dfde 254 Pfam PF01975 Survival protein SurE 4 181 1.3E-56 T 01-11-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 SUPERFAMILY SSF50249 363 444 2.39E-20 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 Pfam PF00575 S1 RNA binding domain 279 347 2.8E-19 T 01-11-2018 IPR003029 S1 domain GO:0003676 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 Pfam PF00575 S1 RNA binding domain 19 86 3.6E-7 T 01-11-2018 IPR003029 S1 domain GO:0003676 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 01-11-2018 IPR003029 S1 domain GO:0003676 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 Pfam PF00575 S1 RNA binding domain 361 434 1.8E-21 T 01-11-2018 IPR003029 S1 domain GO:0003676 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 Pfam PF00575 S1 RNA binding domain 103 171 3.6E-10 T 01-11-2018 IPR003029 S1 domain GO:0003676 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 Pfam PF00575 S1 RNA binding domain 449 520 1.3E-15 T 01-11-2018 IPR003029 S1 domain GO:0003676 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 SUPERFAMILY SSF50249 429 538 2.09E-22 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 SUPERFAMILY SSF50249 103 185 8.58E-15 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 PIRSF PIRSF002111 1 534 1.2E-219 T 01-11-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 SUPERFAMILY SSF50249 2 112 1.79E-18 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.1E-237 T 01-11-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 Gene3D G3DSA:2.40.50.140 6 97 5.1E-17 T 01-11-2018 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 SUPERFAMILY SSF50249 189 275 7.46E-27 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.1E-98 T 01-11-2018 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.1E-98 T 01-11-2018 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.1E-98 T 01-11-2018 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.1E-98 T 01-11-2018 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.1E-98 T 01-11-2018 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.1E-98 T 01-11-2018 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.1E-98 T 01-11-2018 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.1E-98 T 01-11-2018 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.1E-98 T 01-11-2018 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 Gene3D G3DSA:2.40.50.140 98 181 1.6E-7 T 01-11-2018 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 Gene3D G3DSA:2.40.50.140 358 444 2.9E-23 T 01-11-2018 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 Gene3D G3DSA:2.40.50.140 269 357 2.9E-30 T 01-11-2018 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 Gene3D G3DSA:2.40.50.140 187 268 1.1E-27 T 01-11-2018 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 SUPERFAMILY SSF50249 255 370 3.91E-29 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 Gene3D G3DSA:2.40.50.140 445 528 2.6E-21 T 01-11-2018 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 SMART SM00316 275 347 6.5E-26 T 01-11-2018 IPR022967 RNA-binding domain, S1 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 SMART SM00316 103 171 4.7E-9 T 01-11-2018 IPR022967 RNA-binding domain, S1 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 SMART SM00316 362 434 5.2E-21 T 01-11-2018 IPR022967 RNA-binding domain, S1 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 SMART SM00316 19 87 4.6E-5 T 01-11-2018 IPR022967 RNA-binding domain, S1 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 SMART SM00316 190 260 2.8E-28 T 01-11-2018 IPR022967 RNA-binding domain, S1 D3790_09870 461b7b7a015ef8a2cacc49cf06220b94 557 SMART SM00316 449 520 7.3E-21 T 01-11-2018 IPR022967 RNA-binding domain, S1 D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 186 5.0E-31 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 Gene3D G3DSA:3.30.70.240 612 682 2.3E-94 T 01-11-2018 D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 Pfam PF14492 Elongation Factor G, domain II 411 485 1.7E-34 T 01-11-2018 D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 Pfam PF00679 Elongation factor G C-terminus 608 693 9.6E-31 T 01-11-2018 IPR000640 Elongation factor EFG, domain V-like D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 SUPERFAMILY SSF54211 489 607 5.06E-46 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 Hamap MF_00054_B Elongation factor G [fusA]. 6 699 114.489 T 01-11-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 Pfam PF03144 Elongation factor Tu domain 2 331 398 4.9E-17 T 01-11-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 SUPERFAMILY SSF54980 411 488 3.2E-25 T 01-11-2018 IPR035647 EF-G domain III/V-like D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 Gene3D G3DSA:3.30.230.10 491 695 2.3E-94 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 SUPERFAMILY SSF52540 6 287 8.15E-106 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 SUPERFAMILY SSF54980 608 698 5.28E-29 T 01-11-2018 IPR035647 EF-G domain III/V-like D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 SMART SM00838 608 695 5.1E-59 T 01-11-2018 IPR000640 Elongation factor EFG, domain V-like D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 Gene3D G3DSA:3.30.70.870 412 487 7.4E-33 T 01-11-2018 D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 SMART SM00889 487 606 2.0E-77 T 01-11-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 Gene3D G3DSA:2.40.30.10 299 407 4.5E-44 T 01-11-2018 D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 1.7E-67 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 Pfam PF03764 Elongation factor G, domain IV 486 606 7.0E-49 T 01-11-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 700 0.0 T 01-11-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 Gene3D G3DSA:3.40.50.300 1 298 7.2E-115 T 01-11-2018 D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D3790_16775 fae2ee41ac0eb80aabfd167e5681e3b8 702 SUPERFAMILY SSF50447 271 411 1.86E-35 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily D3790_03390 9403d7d0ce25747fb7761d22c7255053 96 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 89 1.0E-8 T 01-11-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 D3790_17810 817f3b9a983e60a0e9fdb17600c3cbf9 157 Pfam PF13551 Winged helix-turn helix 30 90 2.8E-11 T 01-11-2018 D3790_17810 817f3b9a983e60a0e9fdb17600c3cbf9 157 SUPERFAMILY SSF46689 19 132 8.96E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_13695 e104f782d5e839c5d989931d650a6927 352 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 336 6.6E-92 T 01-11-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 D3790_13695 e104f782d5e839c5d989931d650a6927 352 SUPERFAMILY SSF52540 115 342 7.3E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_13695 e104f782d5e839c5d989931d650a6927 352 Gene3D G3DSA:1.10.40.50 278 352 9.7E-28 T 01-11-2018 D3790_13695 e104f782d5e839c5d989931d650a6927 352 Gene3D G3DSA:2.40.50.140 36 103 7.7E-25 T 01-11-2018 D3790_13695 e104f782d5e839c5d989931d650a6927 352 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 41 342 37.163 T 01-11-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 D3790_13695 e104f782d5e839c5d989931d650a6927 352 Pfam PF03193 RsgA GTPase 101 278 4.5E-55 T 01-11-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 D3790_13695 e104f782d5e839c5d989931d650a6927 352 Gene3D G3DSA:3.40.50.300 104 277 4.0E-48 T 01-11-2018 D3790_06655 1ce1166448549825ae3777622003422e 346 SUPERFAMILY SSF51735 5 197 6.13E-50 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_06655 1ce1166448549825ae3777622003422e 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 233 1.1E-14 T 01-11-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 D3790_06655 1ce1166448549825ae3777622003422e 346 Gene3D G3DSA:3.30.360.10 127 330 1.1E-130 T 01-11-2018 D3790_06655 1ce1166448549825ae3777622003422e 346 Gene3D G3DSA:3.40.50.720 6 316 1.1E-130 T 01-11-2018 D3790_06655 1ce1166448549825ae3777622003422e 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 2.2E-26 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 D3790_02925 644658883476e94adda0161fb72f9451 358 Pfam PF00154 recA bacterial DNA recombination protein 9 270 6.3E-142 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D3790_02925 644658883476e94adda0161fb72f9451 358 PRINTS PR00142 RecA protein signature 299 316 9.5E-84 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D3790_02925 644658883476e94adda0161fb72f9451 358 PRINTS PR00142 RecA protein signature 95 124 9.5E-84 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D3790_02925 644658883476e94adda0161fb72f9451 358 PRINTS PR00142 RecA protein signature 245 274 9.5E-84 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D3790_02925 644658883476e94adda0161fb72f9451 358 PRINTS PR00142 RecA protein signature 212 240 9.5E-84 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D3790_02925 644658883476e94adda0161fb72f9451 358 PRINTS PR00142 RecA protein signature 129 158 9.5E-84 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D3790_02925 644658883476e94adda0161fb72f9451 358 PRINTS PR00142 RecA protein signature 167 196 9.5E-84 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D3790_02925 644658883476e94adda0161fb72f9451 358 ProSitePatterns PS00321 recA signature. 215 223 - T 01-11-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 D3790_02925 644658883476e94adda0161fb72f9451 358 Gene3D G3DSA:3.30.250.10 271 329 3.5E-24 T 01-11-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal D3790_02925 644658883476e94adda0161fb72f9451 358 SUPERFAMILY SSF54752 271 326 3.14E-20 T 01-11-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal D3790_02925 644658883476e94adda0161fb72f9451 358 Hamap MF_00268 Protein RecA [recA]. 7 331 50.591 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D3790_02925 644658883476e94adda0161fb72f9451 358 Gene3D G3DSA:3.40.50.300 28 269 3.3E-82 T 01-11-2018 D3790_02925 644658883476e94adda0161fb72f9451 358 SUPERFAMILY SSF52540 6 269 5.55E-65 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_02925 644658883476e94adda0161fb72f9451 358 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 1.1E-170 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D3790_02925 644658883476e94adda0161fb72f9451 358 SMART SM00382 59 230 6.0E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_06155 28dda51fbbbfad6cd8b4dc39c23b496a 268 Gene3D G3DSA:3.60.10.10 1 267 5.0E-80 T 01-11-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D3790_06155 28dda51fbbbfad6cd8b4dc39c23b496a 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 01-11-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 D3790_06155 28dda51fbbbfad6cd8b4dc39c23b496a 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 01-11-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 D3790_06155 28dda51fbbbfad6cd8b4dc39c23b496a 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 1.6E-22 T 01-11-2018 IPR005135 Endonuclease/exonuclease/phosphatase D3790_06155 28dda51fbbbfad6cd8b4dc39c23b496a 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 1.5E-102 T 01-11-2018 D3790_06155 28dda51fbbbfad6cd8b4dc39c23b496a 268 SUPERFAMILY SSF56219 1 267 9.16E-85 T 01-11-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D3790_06155 28dda51fbbbfad6cd8b4dc39c23b496a 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 1.8E-87 T 01-11-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 D3790_14160 5921f3977811ab6e60d6fd31215aa902 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 3.0E-31 T 01-11-2018 IPR021131 Ribosomal protein L18e/L15P D3790_14160 5921f3977811ab6e60d6fd31215aa902 144 SUPERFAMILY SSF52080 4 143 4.45E-46 T 01-11-2018 IPR036227 Ribosomal L18e/L15P superfamily D3790_14160 5921f3977811ab6e60d6fd31215aa902 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 4.4E-51 T 01-11-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14160 5921f3977811ab6e60d6fd31215aa902 144 Gene3D G3DSA:3.100.10.10 70 144 1.5E-11 T 01-11-2018 D3790_14160 5921f3977811ab6e60d6fd31215aa902 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 01-11-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14160 5921f3977811ab6e60d6fd31215aa902 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.205 T 01-11-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 D3790_15125 b7c98231408d61b73e23d534c0400b20 325 PIRSF PIRSF000532 4 325 7.1E-127 T 01-11-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 D3790_15125 b7c98231408d61b73e23d534c0400b20 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 162 178 1.5E-82 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 D3790_15125 b7c98231408d61b73e23d534c0400b20 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 97 113 1.5E-82 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 D3790_15125 b7c98231408d61b73e23d534c0400b20 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 142 160 1.5E-82 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 D3790_15125 b7c98231408d61b73e23d534c0400b20 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 10 29 1.5E-82 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 D3790_15125 b7c98231408d61b73e23d534c0400b20 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 180 197 1.5E-82 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 D3790_15125 b7c98231408d61b73e23d534c0400b20 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 35 48 1.5E-82 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 D3790_15125 b7c98231408d61b73e23d534c0400b20 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 124 141 1.5E-82 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 D3790_15125 b7c98231408d61b73e23d534c0400b20 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 218 230 1.5E-82 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 D3790_15125 b7c98231408d61b73e23d534c0400b20 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 245 267 1.5E-82 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 D3790_15125 b7c98231408d61b73e23d534c0400b20 325 Gene3D G3DSA:3.40.50.460 146 257 1.5E-115 T 01-11-2018 D3790_15125 b7c98231408d61b73e23d534c0400b20 325 Pfam PF00365 Phosphofructokinase 7 281 1.3E-105 T 01-11-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 D3790_15125 b7c98231408d61b73e23d534c0400b20 325 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 5 325 45.277 T 01-11-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 D3790_15125 b7c98231408d61b73e23d534c0400b20 325 ProSitePatterns PS00433 Phosphofructokinase signature. 249 267 - T 01-11-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 D3790_15125 b7c98231408d61b73e23d534c0400b20 325 SUPERFAMILY SSF53784 3 317 1.57E-111 T 01-11-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 D3790_15125 b7c98231408d61b73e23d534c0400b20 325 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 7 305 4.3E-124 T 01-11-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 D3790_15125 b7c98231408d61b73e23d534c0400b20 325 Gene3D G3DSA:3.40.50.450 7 292 1.5E-115 T 01-11-2018 D3790_03845 76d60db9041321990fb46ded388e75c8 422 Pfam PF00202 Aminotransferase class-III 27 421 3.7E-132 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_03845 76d60db9041321990fb46ded388e75c8 422 PIRSF PIRSF000521 29 422 3.9E-32 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_03845 76d60db9041321990fb46ded388e75c8 422 Gene3D G3DSA:3.90.1150.10 11 415 2.7E-176 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_03845 76d60db9041321990fb46ded388e75c8 422 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_03845 76d60db9041321990fb46ded388e75c8 422 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 421 4.2E-187 T 01-11-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 D3790_03845 76d60db9041321990fb46ded388e75c8 422 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 422 51.005 T 01-11-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 D3790_03845 76d60db9041321990fb46ded388e75c8 422 Gene3D G3DSA:3.40.640.10 61 330 2.7E-176 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_03845 76d60db9041321990fb46ded388e75c8 422 SUPERFAMILY SSF53383 2 421 1.11E-137 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_10520 78555a8a91c9c60ba010af571986b63b 262 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 220 5.9E-41 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 D3790_10520 78555a8a91c9c60ba010af571986b63b 262 Gene3D G3DSA:3.30.950.10 123 242 8.0E-50 T 01-11-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 D3790_10520 78555a8a91c9c60ba010af571986b63b 262 Gene3D G3DSA:3.40.1010.10 10 122 1.5E-27 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 D3790_10520 78555a8a91c9c60ba010af571986b63b 262 SUPERFAMILY SSF53790 11 260 8.24E-66 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 D3790_10520 78555a8a91c9c60ba010af571986b63b 262 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 15 260 1.3E-98 T 01-11-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 D3790_10520 78555a8a91c9c60ba010af571986b63b 262 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 18 32 - T 01-11-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D3790_05380 af77f58fef66604df7c6a6e6aa4ca5a0 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 226 8.4E-23 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D3790_05380 af77f58fef66604df7c6a6e6aa4ca5a0 235 Gene3D G3DSA:3.40.50.2300 2 132 1.4E-35 T 01-11-2018 D3790_05380 af77f58fef66604df7c6a6e6aa4ca5a0 235 Gene3D G3DSA:1.10.10.10 137 234 3.2E-31 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_05380 af77f58fef66604df7c6a6e6aa4ca5a0 235 Pfam PF00072 Response regulator receiver domain 10 119 7.3E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_05380 af77f58fef66604df7c6a6e6aa4ca5a0 235 SMART SM00448 8 118 9.5E-42 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_05380 af77f58fef66604df7c6a6e6aa4ca5a0 235 SUPERFAMILY SSF52172 5 136 1.57E-40 T 01-11-2018 IPR011006 CheY-like superfamily D3790_05380 af77f58fef66604df7c6a6e6aa4ca5a0 235 SMART SM00862 151 227 1.7E-22 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D3790_05380 af77f58fef66604df7c6a6e6aa4ca5a0 235 SUPERFAMILY SSF46894 135 229 5.39E-25 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D3790_07645 fac0068c4aed09868811c91145470cf8 668 SMART SM00869 410 656 6.5E-17 T 01-11-2018 IPR005546 Autotransporter beta-domain D3790_07645 fac0068c4aed09868811c91145470cf8 668 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 418 668 6.4E-13 T 01-11-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 D3790_07645 fac0068c4aed09868811c91145470cf8 668 PIRSF PIRSF037375 1 668 1.3E-176 T 01-11-2018 IPR017186 Lipase, autotransporter EstA D3790_07645 fac0068c4aed09868811c91145470cf8 668 SUPERFAMILY SSF52266 27 188 4.19E-6 T 01-11-2018 D3790_07645 fac0068c4aed09868811c91145470cf8 668 Pfam PF03797 Autotransporter beta-domain 416 646 2.1E-33 T 01-11-2018 IPR005546 Autotransporter beta-domain D3790_07645 fac0068c4aed09868811c91145470cf8 668 Gene3D G3DSA:2.40.128.130 380 668 1.8E-46 T 01-11-2018 IPR036709 Autotransporter beta-domain superfamily D3790_07645 fac0068c4aed09868811c91145470cf8 668 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 28 39 - T 01-11-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 D3790_07645 fac0068c4aed09868811c91145470cf8 668 Gene3D G3DSA:3.40.50.1110 15 245 7.6E-29 T 01-11-2018 IPR036514 SGNH hydrolase superfamily D3790_07645 fac0068c4aed09868811c91145470cf8 668 Gene3D G3DSA:3.40.50.1110 249 378 3.7E-16 T 01-11-2018 IPR036514 SGNH hydrolase superfamily D3790_07645 fac0068c4aed09868811c91145470cf8 668 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 28 365 3.9E-9 T 01-11-2018 IPR001087 GDSL lipase/esterase GO:0016788 D3790_07645 fac0068c4aed09868811c91145470cf8 668 SUPERFAMILY SSF103515 406 668 3.66E-32 T 01-11-2018 IPR036709 Autotransporter beta-domain superfamily D3790_03740 a85e584ab9d391b2594efd3d341dff2c 167 ProSitePatterns PS01068 OmpA-like domain. 99 143 - T 01-11-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 D3790_03740 a85e584ab9d391b2594efd3d341dff2c 167 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 65 167 4.9E-47 T 01-11-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 D3790_03740 a85e584ab9d391b2594efd3d341dff2c 167 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 167 31.387 T 01-11-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 D3790_03740 a85e584ab9d391b2594efd3d341dff2c 167 SUPERFAMILY SSF103088 54 166 2.75E-35 T 01-11-2018 IPR036737 OmpA-like domain superfamily D3790_03740 a85e584ab9d391b2594efd3d341dff2c 167 Pfam PF00691 OmpA family 66 161 9.1E-22 T 01-11-2018 IPR006665 OmpA-like domain D3790_03740 a85e584ab9d391b2594efd3d341dff2c 167 Gene3D G3DSA:3.30.1330.60 37 167 5.8E-47 T 01-11-2018 IPR036737 OmpA-like domain superfamily D3790_03740 a85e584ab9d391b2594efd3d341dff2c 167 PRINTS PR01021 OMPA domain signature 112 128 5.0E-18 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D3790_03740 a85e584ab9d391b2594efd3d341dff2c 167 PRINTS PR01021 OMPA domain signature 67 89 5.0E-18 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D3790_03740 a85e584ab9d391b2594efd3d341dff2c 167 PRINTS PR01021 OMPA domain signature 97 112 5.0E-18 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D3790_14865 879777a845a60b6fd2a549259c5bddca 145 Gene3D G3DSA:3.40.250.10 23 143 1.0E-21 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily D3790_14865 879777a845a60b6fd2a549259c5bddca 145 Pfam PF00581 Rhodanese-like domain 45 134 2.8E-14 T 01-11-2018 IPR001763 Rhodanese-like domain D3790_14865 879777a845a60b6fd2a549259c5bddca 145 SMART SM00450 41 139 1.2E-15 T 01-11-2018 IPR001763 Rhodanese-like domain D3790_14865 879777a845a60b6fd2a549259c5bddca 145 SUPERFAMILY SSF52821 16 143 2.49E-27 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily D3790_09765 fc95baf3b7756d9a9c5dcd72b8fc7f85 872 SUPERFAMILY SSF55486 204 450 5.49E-73 T 01-11-2018 D3790_09765 fc95baf3b7756d9a9c5dcd72b8fc7f85 872 SUPERFAMILY SSF63737 8 193 5.62E-46 T 01-11-2018 D3790_09765 fc95baf3b7756d9a9c5dcd72b8fc7f85 872 Gene3D G3DSA:1.10.1740.60 195 279 6.1E-41 T 01-11-2018 D3790_09765 fc95baf3b7756d9a9c5dcd72b8fc7f85 872 Gene3D G3DSA:1.25.50.10 546 871 6.3E-117 T 01-11-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily D3790_09765 fc95baf3b7756d9a9c5dcd72b8fc7f85 872 Gene3D G3DSA:2.60.40.1730 15 194 1.3E-71 T 01-11-2018 D3790_09765 fc95baf3b7756d9a9c5dcd72b8fc7f85 872 Gene3D G3DSA:1.10.390.10 280 443 8.3E-64 T 01-11-2018 IPR027268 Peptidase M4/M1, CTD superfamily D3790_09765 fc95baf3b7756d9a9c5dcd72b8fc7f85 872 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 548 871 8.4E-114 T 01-11-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal D3790_09765 fc95baf3b7756d9a9c5dcd72b8fc7f85 872 Gene3D G3DSA:2.60.40.1840 444 545 5.7E-35 T 01-11-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily D3790_09765 fc95baf3b7756d9a9c5dcd72b8fc7f85 872 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 1.6E-7 T 01-11-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D3790_09765 fc95baf3b7756d9a9c5dcd72b8fc7f85 872 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 1.6E-7 T 01-11-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D3790_09765 fc95baf3b7756d9a9c5dcd72b8fc7f85 872 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 1.6E-7 T 01-11-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D3790_09765 fc95baf3b7756d9a9c5dcd72b8fc7f85 872 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 1.6E-7 T 01-11-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D3790_09765 fc95baf3b7756d9a9c5dcd72b8fc7f85 872 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 870 0.0 T 01-11-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 D3790_09765 fc95baf3b7756d9a9c5dcd72b8fc7f85 872 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 444 544 9.9E-33 T 01-11-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold D3790_09765 fc95baf3b7756d9a9c5dcd72b8fc7f85 872 Pfam PF01433 Peptidase family M1 domain 208 439 8.6E-59 T 01-11-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D3790_07845 7014f5f44ca0936150f2677723eafa6e 104 TIGRFAM TIGR01594 holin_lambda: phage holin, lambda family 1 102 6.2E-34 T 01-11-2018 IPR006481 Bacteriophage lambda, GpS, holin D3790_07845 7014f5f44ca0936150f2677723eafa6e 104 Pfam PF05106 Phage holin family (Lysis protein S) 3 100 5.6E-33 T 01-11-2018 IPR006481 Bacteriophage lambda, GpS, holin D3790_10145 a699bf5ed3a443dd7cc5c29017f7be09 468 SUPERFAMILY SSF51735 4 175 2.58E-51 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_10145 a699bf5ed3a443dd7cc5c29017f7be09 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 252 264 - T 01-11-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D3790_10145 a699bf5ed3a443dd7cc5c29017f7be09 468 Gene3D G3DSA:1.20.5.320 435 468 3.6E-22 T 01-11-2018 D3790_10145 a699bf5ed3a443dd7cc5c29017f7be09 468 Gene3D G3DSA:3.40.50.720 1 179 6.0E-56 T 01-11-2018 D3790_10145 a699bf5ed3a443dd7cc5c29017f7be09 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 248 275 1.5E-89 T 01-11-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D3790_10145 a699bf5ed3a443dd7cc5c29017f7be09 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 167 195 1.5E-89 T 01-11-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D3790_10145 a699bf5ed3a443dd7cc5c29017f7be09 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 01-11-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D3790_10145 a699bf5ed3a443dd7cc5c29017f7be09 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 01-11-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D3790_10145 a699bf5ed3a443dd7cc5c29017f7be09 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 01-11-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D3790_10145 a699bf5ed3a443dd7cc5c29017f7be09 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.5E-89 T 01-11-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D3790_10145 a699bf5ed3a443dd7cc5c29017f7be09 468 PIRSF PIRSF000109 1 468 6.6E-242 T 01-11-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D3790_10145 a699bf5ed3a443dd7cc5c29017f7be09 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 178 466 3.2E-135 T 01-11-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D3790_10145 a699bf5ed3a443dd7cc5c29017f7be09 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 173 1.9E-51 T 01-11-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 D3790_10145 a699bf5ed3a443dd7cc5c29017f7be09 468 Gene3D G3DSA:1.10.1040.10 180 434 8.5E-113 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 D3790_10145 a699bf5ed3a443dd7cc5c29017f7be09 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 467 2.6E-232 T 01-11-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D3790_10145 a699bf5ed3a443dd7cc5c29017f7be09 468 SMART SM01350 178 467 5.9E-225 T 01-11-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D3790_10145 a699bf5ed3a443dd7cc5c29017f7be09 468 SUPERFAMILY SSF48179 176 467 7.48E-133 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D3790_09665 eb0b1c10608ad071e143bfcc307f3f44 345 Pfam PF13592 Winged helix-turn helix 96 152 1.0E-17 T 01-11-2018 IPR025959 Winged helix-turn helix domain D3790_09665 eb0b1c10608ad071e143bfcc307f3f44 345 SUPERFAMILY SSF46689 11 127 3.67E-21 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_09665 eb0b1c10608ad071e143bfcc307f3f44 345 Pfam PF13551 Winged helix-turn helix 28 85 1.1E-9 T 01-11-2018 D3790_09665 eb0b1c10608ad071e143bfcc307f3f44 345 Pfam PF13358 DDE superfamily endonuclease 165 309 4.7E-37 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_09665 eb0b1c10608ad071e143bfcc307f3f44 345 Gene3D G3DSA:3.30.420.470 128 344 5.5E-12 T 01-11-2018 D3790_09665 eb0b1c10608ad071e143bfcc307f3f44 345 SUPERFAMILY SSF53098 217 318 7.74E-8 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_19010 f58869ba5fc8d737df616e7824e275a0 728 SUPERFAMILY SSF48179 623 714 8.5E-23 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D3790_19010 f58869ba5fc8d737df616e7824e275a0 728 SUPERFAMILY SSF52096 6 304 1.77E-70 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily D3790_19010 f58869ba5fc8d737df616e7824e275a0 728 SUPERFAMILY SSF51735 315 495 8.57E-58 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_19010 f58869ba5fc8d737df616e7824e275a0 728 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 1.8E-61 T 01-11-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D3790_19010 f58869ba5fc8d737df616e7824e275a0 728 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 01-11-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D3790_19010 f58869ba5fc8d737df616e7824e275a0 728 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 692 1.6E-5 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D3790_19010 f58869ba5fc8d737df616e7824e275a0 728 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 3.0E-24 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D3790_19010 f58869ba5fc8d737df616e7824e275a0 728 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 51.693 T 01-11-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D3790_19010 f58869ba5fc8d737df616e7824e275a0 728 Gene3D G3DSA:3.90.226.10 1 310 3.0E-95 T 01-11-2018 D3790_19010 f58869ba5fc8d737df616e7824e275a0 728 Gene3D G3DSA:3.40.50.720 314 496 4.5E-67 T 01-11-2018 D3790_19010 f58869ba5fc8d737df616e7824e275a0 728 Gene3D G3DSA:1.10.1040.50 497 708 3.7E-71 T 01-11-2018 D3790_19010 f58869ba5fc8d737df616e7824e275a0 728 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 D3790_19010 f58869ba5fc8d737df616e7824e275a0 728 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 206 8.6E-43 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 D3790_19010 f58869ba5fc8d737df616e7824e275a0 728 SUPERFAMILY SSF48179 495 611 8.5E-29 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D3790_19010 f58869ba5fc8d737df616e7824e275a0 728 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 01-11-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D3790_17165 8ede21ad679538d07c2bce7c1a4b58d6 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 1.5E-29 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 D3790_17165 8ede21ad679538d07c2bce7c1a4b58d6 353 Gene3D G3DSA:3.90.180.10 12 324 1.1E-70 T 01-11-2018 D3790_17165 8ede21ad679538d07c2bce7c1a4b58d6 353 Gene3D G3DSA:3.40.50.720 151 285 1.1E-70 T 01-11-2018 D3790_17165 8ede21ad679538d07c2bce7c1a4b58d6 353 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 01-11-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 D3790_17165 8ede21ad679538d07c2bce7c1a4b58d6 353 SUPERFAMILY SSF50129 1 177 1.37E-40 T 01-11-2018 IPR011032 GroES-like superfamily D3790_17165 8ede21ad679538d07c2bce7c1a4b58d6 353 SUPERFAMILY SSF51735 140 305 6.66E-13 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_17165 8ede21ad679538d07c2bce7c1a4b58d6 353 Pfam PF16912 Glucose dehydrogenase C-terminus 143 326 3.9E-9 T 01-11-2018 IPR031640 Glucose dehydrogenase, C-terminal KEGG: 00030+1.1.1.47 D3790_16390 37f744becefa38ed8ad626e237217705 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 01-11-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 D3790_16390 37f744becefa38ed8ad626e237217705 252 SUPERFAMILY SSF100950 74 233 4.19E-29 T 01-11-2018 IPR037171 NagB/RpiA transferase-like D3790_16390 37f744becefa38ed8ad626e237217705 252 Gene3D G3DSA:1.10.10.10 1 58 1.2E-7 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_16390 37f744becefa38ed8ad626e237217705 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.5E-23 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 D3790_16390 37f744becefa38ed8ad626e237217705 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.6E-12 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 D3790_16390 37f744becefa38ed8ad626e237217705 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.6E-12 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 D3790_16390 37f744becefa38ed8ad626e237217705 252 SMART SM00420 6 58 1.2E-25 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 D3790_16390 37f744becefa38ed8ad626e237217705 252 SMART SM01134 72 233 1.6E-70 T 01-11-2018 D3790_16390 37f744becefa38ed8ad626e237217705 252 SUPERFAMILY SSF46785 3 73 1.71E-16 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_16390 37f744becefa38ed8ad626e237217705 252 Gene3D G3DSA:3.30.750.70 70 133 3.8E-10 T 01-11-2018 D3790_16390 37f744becefa38ed8ad626e237217705 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 8.3E-53 T 01-11-2018 IPR014036 DeoR C-terminal sensor domain D3790_10655 775d2b866e13fb882294e7021497d285 63 SUPERFAMILY SSF53448 8 63 2.06E-20 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_10655 775d2b866e13fb882294e7021497d285 63 Pfam PF00535 Glycosyl transferase family 2 9 63 2.0E-13 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 D3790_10655 775d2b866e13fb882294e7021497d285 63 Gene3D G3DSA:3.90.550.10 7 63 3.4E-23 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_07415 24e0572545173f35acb7cff37c05ee1f 320 SUPERFAMILY SSF51197 40 300 1.33E-36 T 01-11-2018 D3790_07415 24e0572545173f35acb7cff37c05ee1f 320 Gene3D G3DSA:3.60.130.10 6 316 2.9E-69 T 01-11-2018 D3790_07415 24e0572545173f35acb7cff37c05ee1f 320 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 237 298 8.6E-10 T 01-11-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 D3790_07415 24e0572545173f35acb7cff37c05ee1f 320 PIRSF PIRSF019543 2 316 1.9E-75 T 01-11-2018 IPR014503 Clavaminate synthase-like GO:0005506|GO:0016491|GO:0055114 D3790_06210 49227ac42e058d687e4e50c3b932a62f 883 PIRSF PIRSF000111 1 866 0.0 T 01-11-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 D3790_06210 49227ac42e058d687e4e50c3b932a62f 883 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 01-11-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 D3790_06210 49227ac42e058d687e4e50c3b932a62f 883 Gene3D G3DSA:3.40.309.10 218 404 5.0E-183 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D3790_06210 49227ac42e058d687e4e50c3b932a62f 883 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 8.2E-111 T 01-11-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 D3790_06210 49227ac42e058d687e4e50c3b932a62f 883 SUPERFAMILY SSF56796 449 867 4.32E-116 T 01-11-2018 D3790_06210 49227ac42e058d687e4e50c3b932a62f 883 Gene3D G3DSA:1.20.1090.10 645 865 4.9E-60 T 01-11-2018 D3790_06210 49227ac42e058d687e4e50c3b932a62f 883 Pfam PF00171 Aldehyde dehydrogenase family 6 399 9.7E-29 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D3790_06210 49227ac42e058d687e4e50c3b932a62f 883 SUPERFAMILY SSF53720 6 453 2.88E-85 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D3790_06210 49227ac42e058d687e4e50c3b932a62f 883 Gene3D G3DSA:3.40.50.1970 450 643 1.5E-55 T 01-11-2018 D3790_06210 49227ac42e058d687e4e50c3b932a62f 883 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 01-11-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 D3790_06210 49227ac42e058d687e4e50c3b932a62f 883 Gene3D G3DSA:3.40.605.10 10 444 5.0E-183 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D3790_18805 ea7ed8f7e35e2d58a57d3c5214e2e040 943 Gene3D G3DSA:3.30.190.20 130 239 9.2E-245 T 01-11-2018 D3790_18805 ea7ed8f7e35e2d58a57d3c5214e2e040 943 SUPERFAMILY SSF52540 1 569 8.32E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_18805 ea7ed8f7e35e2d58a57d3c5214e2e040 943 Gene3D G3DSA:1.20.1580.10 90 492 9.2E-245 T 01-11-2018 D3790_18805 ea7ed8f7e35e2d58a57d3c5214e2e040 943 Gene3D G3DSA:3.40.50.300 617 936 1.6E-139 T 01-11-2018 D3790_18805 ea7ed8f7e35e2d58a57d3c5214e2e040 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 925 0.0 T 01-11-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 D3790_18805 ea7ed8f7e35e2d58a57d3c5214e2e040 943 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_18805 ea7ed8f7e35e2d58a57d3c5214e2e040 943 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_18805 ea7ed8f7e35e2d58a57d3c5214e2e040 943 Gene3D G3DSA:1.20.1580.10 692 830 1.6E-139 T 01-11-2018 D3790_18805 ea7ed8f7e35e2d58a57d3c5214e2e040 943 Pfam PF00005 ABC transporter 808 860 3.1E-5 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_18805 ea7ed8f7e35e2d58a57d3c5214e2e040 943 Gene3D G3DSA:3.40.50.300 6 594 9.2E-245 T 01-11-2018 D3790_18805 ea7ed8f7e35e2d58a57d3c5214e2e040 943 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.914 T 01-11-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 D3790_18805 ea7ed8f7e35e2d58a57d3c5214e2e040 943 Gene3D G3DSA:1.10.8.280 287 403 9.2E-245 T 01-11-2018 D3790_18805 ea7ed8f7e35e2d58a57d3c5214e2e040 943 SUPERFAMILY SSF52540 615 912 4.96E-52 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16730 34044477cf8ebaa1e907b6fc7f07ee94 1408 SUPERFAMILY SSF64484 16 1365 0.0 T 01-11-2018 D3790_16730 34044477cf8ebaa1e907b6fc7f07ee94 1408 Gene3D G3DSA:1.10.132.30 638 790 7.0E-66 T 01-11-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16730 34044477cf8ebaa1e907b6fc7f07ee94 1408 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 4.4E-25 T 01-11-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16730 34044477cf8ebaa1e907b6fc7f07ee94 1408 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1376 18.985 T 01-11-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16730 34044477cf8ebaa1e907b6fc7f07ee94 1408 Gene3D G3DSA:2.40.50.100 1151 1215 1.7E-60 T 01-11-2018 D3790_16730 34044477cf8ebaa1e907b6fc7f07ee94 1408 Gene3D G3DSA:1.10.274.100 490 637 2.1E-31 T 01-11-2018 D3790_16730 34044477cf8ebaa1e907b6fc7f07ee94 1408 Gene3D G3DSA:1.10.1790.20 1135 1314 1.7E-60 T 01-11-2018 D3790_16730 34044477cf8ebaa1e907b6fc7f07ee94 1408 Gene3D G3DSA:1.10.40.90 374 416 2.0E-21 T 01-11-2018 D3790_16730 34044477cf8ebaa1e907b6fc7f07ee94 1408 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.2E-18 T 01-11-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16730 34044477cf8ebaa1e907b6fc7f07ee94 1408 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 1.2E-76 T 01-11-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16730 34044477cf8ebaa1e907b6fc7f07ee94 1408 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.3E-89 T 01-11-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16730 34044477cf8ebaa1e907b6fc7f07ee94 1408 Gene3D G3DSA:2.40.50.100 948 1022 7.7E-26 T 01-11-2018 D3790_16730 34044477cf8ebaa1e907b6fc7f07ee94 1408 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 01-11-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16730 34044477cf8ebaa1e907b6fc7f07ee94 1408 Gene3D G3DSA:2.40.50.100 1023 1126 6.5E-29 T 01-11-2018 D3790_16730 34044477cf8ebaa1e907b6fc7f07ee94 1408 SMART SM00663 235 514 2.7E-184 T 01-11-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16730 34044477cf8ebaa1e907b6fc7f07ee94 1408 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.9E-27 T 01-11-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16730 34044477cf8ebaa1e907b6fc7f07ee94 1408 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 01-11-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16730 34044477cf8ebaa1e907b6fc7f07ee94 1408 Gene3D G3DSA:1.10.150.390 1316 1377 3.1E-28 T 01-11-2018 D3790_10625 c824353e74007c58044e65f77bf199ef 172 Gene3D G3DSA:3.40.50.360 1 172 9.6E-47 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_10625 c824353e74007c58044e65f77bf199ef 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 01-11-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 D3790_10625 c824353e74007c58044e65f77bf199ef 172 Pfam PF00258 Flavodoxin 5 160 1.1E-23 T 01-11-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 D3790_10625 c824353e74007c58044e65f77bf199ef 172 SUPERFAMILY SSF52218 1 169 2.1E-45 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_10625 c824353e74007c58044e65f77bf199ef 172 PIRSF PIRSF038996 1 171 1.7E-54 T 01-11-2018 IPR010086 Flavodoxin, long chain GO:0010181 D3790_10625 c824353e74007c58044e65f77bf199ef 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 3.7E-68 T 01-11-2018 IPR010086 Flavodoxin, long chain GO:0010181 D3790_13100 aa9af13de9d1d890665f5e32e1716100 372 Gene3D G3DSA:3.90.380.10 170 243 4.7E-12 T 01-11-2018 D3790_13100 aa9af13de9d1d890665f5e32e1716100 372 Gene3D G3DSA:3.90.380.10 247 371 1.4E-5 T 01-11-2018 D3790_13100 aa9af13de9d1d890665f5e32e1716100 372 SUPERFAMILY SSF55961 176 369 2.04E-31 T 01-11-2018 D3790_13100 aa9af13de9d1d890665f5e32e1716100 372 Gene3D G3DSA:2.102.10.10 44 169 3.1E-38 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 D3790_13100 aa9af13de9d1d890665f5e32e1716100 372 Pfam PF00355 Rieske [2Fe-2S] domain 46 134 6.2E-20 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 D3790_13100 aa9af13de9d1d890665f5e32e1716100 372 Hamap MF_02097 Carnitine monooxygenase oxygenase subunit. 1 371 73.92 T 01-11-2018 IPR039004 Carnitine monooxygenase oxygenase subunit GO:0009437|GO:0051537 D3790_13100 aa9af13de9d1d890665f5e32e1716100 372 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 185 369 1.2E-17 T 01-11-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 D3790_13100 aa9af13de9d1d890665f5e32e1716100 372 SUPERFAMILY SSF50022 18 158 7.07E-47 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 D3790_13100 aa9af13de9d1d890665f5e32e1716100 372 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 61 76 3.3E-23 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 D3790_13100 aa9af13de9d1d890665f5e32e1716100 372 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 144 170 3.3E-23 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 D3790_13100 aa9af13de9d1d890665f5e32e1716100 372 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 31 56 3.3E-23 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 D3790_13100 aa9af13de9d1d890665f5e32e1716100 372 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 103 123 3.3E-23 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 D3790_13100 aa9af13de9d1d890665f5e32e1716100 372 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 82 102 3.3E-23 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 D3790_13100 aa9af13de9d1d890665f5e32e1716100 372 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 89 112 - T 01-11-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 D3790_05450 b4a57e81de21ef2781e3fedba186e443 118 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 117 3.6E-44 T 01-11-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 D3790_05450 b4a57e81de21ef2781e3fedba186e443 118 Gene3D G3DSA:3.40.30.10 1 118 1.2E-47 T 01-11-2018 D3790_05450 b4a57e81de21ef2781e3fedba186e443 118 Pfam PF03960 ArsC family 7 116 2.7E-22 T 01-11-2018 IPR006660 Arsenate reductase-like D3790_05450 b4a57e81de21ef2781e3fedba186e443 118 SUPERFAMILY SSF52833 4 117 7.74E-36 T 01-11-2018 IPR036249 Thioredoxin-like superfamily D3790_16580 2740006925e5756ef98668f5958ba8bd 693 Gene3D G3DSA:2.40.50.140 47 142 3.6E-14 T 01-11-2018 D3790_16580 2740006925e5756ef98668f5958ba8bd 693 SUPERFAMILY SSF50249 9 175 4.57E-41 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_16580 2740006925e5756ef98668f5958ba8bd 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 3.4E-243 T 01-11-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 D3790_16580 2740006925e5756ef98668f5958ba8bd 693 Gene3D G3DSA:3.40.50.300 208 450 8.0E-81 T 01-11-2018 D3790_16580 2740006925e5756ef98668f5958ba8bd 693 SMART SM00487 265 459 4.4E-30 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_16580 2740006925e5756ef98668f5958ba8bd 693 SMART SM00490 505 589 1.0E-21 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_16580 2740006925e5756ef98668f5958ba8bd 693 Pfam PF00270 DEAD/DEAH box helicase 291 433 1.5E-18 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D3790_16580 2740006925e5756ef98668f5958ba8bd 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 1.1E-17 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_16580 2740006925e5756ef98668f5958ba8bd 693 SUPERFAMILY SSF52540 292 653 3.37E-44 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16580 2740006925e5756ef98668f5958ba8bd 693 SUPERFAMILY SSF52540 205 453 7.98E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16580 2740006925e5756ef98668f5958ba8bd 693 Gene3D G3DSA:3.40.50.300 457 630 8.8E-51 T 01-11-2018 D3790_16580 2740006925e5756ef98668f5958ba8bd 693 Pfam PF17191 RecG wedge domain 14 172 9.6E-18 T 01-11-2018 IPR033454 RecG, wedge domain D3790_15410 ccd46e744e32df9458b41482232771a6 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 2.2E-177 T 01-11-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 D3790_15410 ccd46e744e32df9458b41482232771a6 330 Gene3D G3DSA:3.30.930.10 1 330 2.5E-141 T 01-11-2018 D3790_15410 ccd46e744e32df9458b41482232771a6 330 SUPERFAMILY SSF55681 5 328 6.3E-98 T 01-11-2018 D3790_15410 ccd46e744e32df9458b41482232771a6 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 2.6E-93 T 01-11-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 D3790_15410 ccd46e744e32df9458b41482232771a6 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 44.829 T 01-11-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 D3790_15410 ccd46e744e32df9458b41482232771a6 330 PIRSF PIRSF001555 1 329 3.5E-149 T 01-11-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 D3790_08675 560e840e049679297dbc8a19d7d4a1b0 287 SUPERFAMILY SSF88874 128 286 6.54E-44 T 01-11-2018 D3790_08675 560e840e049679297dbc8a19d7d4a1b0 287 Gene3D G3DSA:3.90.1340.10 129 181 5.3E-26 T 01-11-2018 IPR037053 Phage tail collar domain superfamily D3790_08675 560e840e049679297dbc8a19d7d4a1b0 287 Pfam PF03406 Phage tail fibre repeat 48 89 2.6E-16 T 01-11-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 D3790_08675 560e840e049679297dbc8a19d7d4a1b0 287 Pfam PF07484 Phage Tail Collar Domain 133 180 1.2E-12 T 01-11-2018 IPR011083 Phage tail collar domain D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:3.40.50.12780 4087 4505 1.3E-133 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:3.40.50.12780 2578 2987 1.2E-126 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:3.40.50.12780 1527 1936 8.0E-127 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:3.30.559.10 3638 4007 1.9E-93 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 ProSitePatterns PS00455 Putative AMP-binding domain signature. 621 632 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:3.30.559.10 2131 2497 2.7E-124 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2073 2088 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SUPERFAMILY SSF52777 3369 3598 3.11E-22 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Pfam PF00550 Phosphopantetheine attachment site 2051 2111 9.5E-14 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Pfam PF00550 Phosphopantetheine attachment site 3102 3161 7.6E-12 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Pfam PF00550 Phosphopantetheine attachment site 1000 1060 1.5E-13 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Pfam PF00550 Phosphopantetheine attachment site 4620 4683 2.0E-12 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2742 2753 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SUPERFAMILY SSF47336 4610 4683 1.57E-17 T 01-11-2018 IPR036736 ACP-like superfamily D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3124 3139 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:3.30.559.30 3816 4073 1.9E-93 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:1.10.1200.10 989 1069 8.1E-25 T 01-11-2018 IPR036736 ACP-like superfamily D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:1.10.1200.10 2040 2120 1.7E-24 T 01-11-2018 IPR036736 ACP-like superfamily D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:1.10.1200.10 3092 3169 1.7E-25 T 01-11-2018 IPR036736 ACP-like superfamily D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:3.40.50.1820 4607 4905 9.0E-47 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Pfam PF13193 AMP-binding enzyme C-terminal domain 896 973 2.6E-12 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Pfam PF13193 AMP-binding enzyme C-terminal domain 1952 2024 1.0E-11 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Pfam PF13193 AMP-binding enzyme C-terminal domain 4521 4593 5.2E-12 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Pfam PF13193 AMP-binding enzyme C-terminal domain 3003 3075 1.1E-12 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:3.30.300.30 1938 2039 1.1E-31 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:3.30.300.30 882 988 1.8E-31 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SUPERFAMILY SSF52777 3180 3384 3.45E-30 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SUPERFAMILY SSF56801 4057 4631 1.01E-161 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:3.30.559.30 2306 2553 2.7E-124 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SMART SM00823 Phosphopantetheine attachment site 4618 4687 0.005 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SMART SM00823 Phosphopantetheine attachment site 2049 2118 0.01 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SMART SM00823 Phosphopantetheine attachment site 3100 3168 4.6E-5 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SMART SM00823 Phosphopantetheine attachment site 998 1067 0.018 T 01-11-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SUPERFAMILY SSF52777 3818 4084 4.22E-41 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2609 3019 2.0E-127 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1558 1968 2.1E-127 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4118 4537 4.1E-127 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 488 912 4.2E-135 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SUPERFAMILY SSF47336 2041 2113 1.83E-18 T 01-11-2018 IPR036736 ACP-like superfamily D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SUPERFAMILY SSF53474 4688 4923 1.59E-20 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SUPERFAMILY SSF47336 3092 3164 2.22E-19 T 01-11-2018 IPR036736 ACP-like superfamily D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:3.30.559.10 17 203 2.0E-22 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SUPERFAMILY SSF56801 426 1011 3.66E-164 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SUPERFAMILY SSF47336 990 1062 1.16E-18 T 01-11-2018 IPR036736 ACP-like superfamily D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1022 1037 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:3.30.559.30 204 454 1.1E-29 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:3.30.300.30 4508 4606 9.7E-30 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SUPERFAMILY SSF52777 1081 1251 8.34E-38 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SUPERFAMILY SSF52777 2308 2575 1.56E-54 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SUPERFAMILY SSF52777 17 192 9.0E-24 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SUPERFAMILY SSF56801 2546 3113 2.09E-158 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SUPERFAMILY SSF52777 3638 3815 3.89E-29 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SUPERFAMILY SSF56801 1495 2062 1.44E-157 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SUPERFAMILY SSF52777 1259 1524 2.0E-54 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Pfam PF00668 Condensation domain 1077 1517 1.9E-95 T 01-11-2018 IPR001242 Condensation domain D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Pfam PF00668 Condensation domain 2128 2568 5.5E-95 T 01-11-2018 IPR001242 Condensation domain D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Pfam PF00668 Condensation domain 3183 3601 8.2E-53 T 01-11-2018 IPR001242 Condensation domain D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Pfam PF00668 Condensation domain 12 447 3.6E-58 T 01-11-2018 IPR001242 Condensation domain D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Pfam PF00668 Condensation domain 3633 4077 2.9E-72 T 01-11-2018 IPR001242 Condensation domain D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:3.30.559.10 1080 1446 1.4E-125 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:3.30.559.30 3357 3602 1.8E-41 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Pfam PF00501 AMP-binding enzyme 1537 1944 1.6E-95 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Pfam PF00501 AMP-binding enzyme 2588 2995 5.0E-95 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Pfam PF00501 AMP-binding enzyme 467 887 1.2E-99 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Pfam PF00501 AMP-binding enzyme 4097 4513 8.2E-102 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:3.30.300.30 2990 3091 1.1E-32 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Pfam PF00975 Thioesterase domain 4705 4810 1.6E-17 T 01-11-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:3.30.559.30 1255 1502 1.4E-125 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SUPERFAMILY SSF52777 199 452 3.11E-25 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4642 4657 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 SUPERFAMILY SSF52777 2132 2302 2.72E-37 T 01-11-2018 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 ProSitePatterns PS00455 Putative AMP-binding domain signature. 4254 4265 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:3.30.559.10 3170 3356 1.0E-36 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1691 1702 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_05250 d93d994987b5155cea147ea42c3e4e5d 4949 Gene3D G3DSA:3.40.50.12780 460 881 3.2E-137 T 01-11-2018 D3790_01580 429f3551027aa338eda48cfce70a97b2 252 Pfam PF14348 Domain of unknown function (DUF4400) 54 249 1.9E-72 T 01-11-2018 IPR022266 Integrating conjugative element protein, PFL4697-type D3790_01580 429f3551027aa338eda48cfce70a97b2 252 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 17 252 2.1E-93 T 01-11-2018 IPR022266 Integrating conjugative element protein, PFL4697-type D3790_05055 6c7e955d170808c6db7e7979fe655ea6 476 SUPERFAMILY SSF53098 9 474 1.9E-135 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_05055 6c7e955d170808c6db7e7979fe655ea6 476 PIRSF PIRSF000977 2 476 4.4E-208 T 01-11-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 D3790_05055 6c7e955d170808c6db7e7979fe655ea6 476 Gene3D G3DSA:3.30.420.10 1 200 2.6E-73 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_05055 6c7e955d170808c6db7e7979fe655ea6 476 Gene3D G3DSA:2.30.30.450 213 353 7.5E-55 T 01-11-2018 IPR038649 Exonuclease I, SH3-like domain superfamily D3790_05055 6c7e955d170808c6db7e7979fe655ea6 476 Pfam PF08411 Exonuclease C-terminal 211 471 1.1E-103 T 01-11-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 D3790_05055 6c7e955d170808c6db7e7979fe655ea6 476 Gene3D G3DSA:1.20.1280.70 359 420 7.0E-28 T 01-11-2018 D3790_05055 6c7e955d170808c6db7e7979fe655ea6 476 SMART SM00479 9 202 0.0047 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D3790_05055 6c7e955d170808c6db7e7979fe655ea6 476 Pfam PF00929 Exonuclease 12 191 5.5E-28 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D3790_18120 b2358adbe6c4ce79d61c647941a2d38b 217 Gene3D G3DSA:3.30.2350.10 3 217 1.1E-69 T 01-11-2018 D3790_18120 b2358adbe6c4ce79d61c647941a2d38b 217 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 10 212 2.3E-58 T 01-11-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_18120 b2358adbe6c4ce79d61c647941a2d38b 217 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 59 73 - T 01-11-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_18120 b2358adbe6c4ce79d61c647941a2d38b 217 SUPERFAMILY SSF55120 6 214 4.0E-62 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_18120 b2358adbe6c4ce79d61c647941a2d38b 217 Pfam PF00849 RNA pseudouridylate synthase 21 167 1.0E-29 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_14195 e1c7ae12953cbebabcf69b2bcf6f9ec7 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.63 T 01-11-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14195 e1c7ae12953cbebabcf69b2bcf6f9ec7 179 PIRSF PIRSF002161 1 179 9.5E-67 T 01-11-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14195 e1c7ae12953cbebabcf69b2bcf6f9ec7 179 Pfam PF00281 Ribosomal protein L5 24 80 1.1E-28 T 01-11-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14195 e1c7ae12953cbebabcf69b2bcf6f9ec7 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 01-11-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14195 e1c7ae12953cbebabcf69b2bcf6f9ec7 179 Gene3D G3DSA:3.30.1440.10 1 179 5.1E-81 T 01-11-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14195 e1c7ae12953cbebabcf69b2bcf6f9ec7 179 SUPERFAMILY SSF55282 4 179 3.06E-79 T 01-11-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14195 e1c7ae12953cbebabcf69b2bcf6f9ec7 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 8.1E-41 T 01-11-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_15600 0781576df75a35132c9592a1a415d05e 454 Pfam PF01926 50S ribosome-binding GTPase 218 314 6.2E-25 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_15600 0781576df75a35132c9592a1a415d05e 454 SUPERFAMILY SSF116878 121 454 7.45E-52 T 01-11-2018 D3790_15600 0781576df75a35132c9592a1a415d05e 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.446 T 01-11-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 D3790_15600 0781576df75a35132c9592a1a415d05e 454 Gene3D G3DSA:3.30.1360.120 1 121 9.0E-39 T 01-11-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 D3790_15600 0781576df75a35132c9592a1a415d05e 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 370 5.6E-21 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D3790_15600 0781576df75a35132c9592a1a415d05e 454 Gene3D G3DSA:1.20.120.430 122 454 7.7E-104 T 01-11-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 D3790_15600 0781576df75a35132c9592a1a415d05e 454 SUPERFAMILY SSF52540 72 372 2.36E-46 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_15600 0781576df75a35132c9592a1a415d05e 454 Gene3D G3DSA:3.40.50.300 217 382 7.7E-104 T 01-11-2018 D3790_15600 0781576df75a35132c9592a1a415d05e 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 7.9E-35 T 01-11-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 D3790_15600 0781576df75a35132c9592a1a415d05e 454 Pfam PF12631 MnmE helical domain 123 451 3.9E-61 T 01-11-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 D3790_15600 0781576df75a35132c9592a1a415d05e 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 4.2E-102 T 01-11-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 D3790_13570 21874dfad9759599dba15ba6ef7ac62a 804 Gene3D G3DSA:2.40.50.140 651 762 1.2E-24 T 01-11-2018 D3790_13570 21874dfad9759599dba15ba6ef7ac62a 804 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 731 2.6E-276 T 01-11-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 D3790_13570 21874dfad9759599dba15ba6ef7ac62a 804 Pfam PF08206 Ribonuclease B OB domain 87 144 2.4E-19 T 01-11-2018 IPR013223 Ribonuclease B, N-terminal OB domain D3790_13570 21874dfad9759599dba15ba6ef7ac62a 804 Gene3D G3DSA:2.40.50.140 73 148 3.4E-14 T 01-11-2018 D3790_13570 21874dfad9759599dba15ba6ef7ac62a 804 Pfam PF00773 RNB domain 260 587 6.0E-109 T 01-11-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 D3790_13570 21874dfad9759599dba15ba6ef7ac62a 804 SUPERFAMILY SSF50249 67 147 3.38E-16 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_13570 21874dfad9759599dba15ba6ef7ac62a 804 SUPERFAMILY SSF50249 222 647 3.6E-141 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_13570 21874dfad9759599dba15ba6ef7ac62a 804 Pfam PF00575 S1 RNA binding domain 647 729 4.0E-16 T 01-11-2018 IPR003029 S1 domain GO:0003676 D3790_13570 21874dfad9759599dba15ba6ef7ac62a 804 SMART SM00357 86 145 6.5E-12 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 D3790_13570 21874dfad9759599dba15ba6ef7ac62a 804 Pfam PF08461 Ribonuclease R winged-helix domain 22 85 8.5E-18 T 01-11-2018 IPR013668 Ribonuclease R winged-helix domain D3790_13570 21874dfad9759599dba15ba6ef7ac62a 804 Hamap MF_01895 Ribonuclease R [rnr]. 38 731 56.671 T 01-11-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 D3790_13570 21874dfad9759599dba15ba6ef7ac62a 804 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 730 1.2E-266 T 01-11-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 D3790_13570 21874dfad9759599dba15ba6ef7ac62a 804 SUPERFAMILY SSF50249 140 237 1.14E-15 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_13570 21874dfad9759599dba15ba6ef7ac62a 804 SMART SM00955 260 588 8.0E-182 T 01-11-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 D3790_13570 21874dfad9759599dba15ba6ef7ac62a 804 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 01-11-2018 IPR022966 Ribonuclease II/R, conserved site D3790_13570 21874dfad9759599dba15ba6ef7ac62a 804 SUPERFAMILY SSF50249 648 744 8.58E-22 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_13570 21874dfad9759599dba15ba6ef7ac62a 804 SMART SM00316 648 731 1.9E-13 T 01-11-2018 IPR022967 RNA-binding domain, S1 D3790_13570 21874dfad9759599dba15ba6ef7ac62a 804 SMART SM00316 80 142 60.0 T 01-11-2018 IPR022967 RNA-binding domain, S1 D3790_03020 d2d768d563e474a3e7b94760105fe7fa 373 Gene3D G3DSA:1.20.59.10 1 80 2.4E-16 T 01-11-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D3790_03020 d2d768d563e474a3e7b94760105fe7fa 373 SUPERFAMILY SSF51735 92 238 2.4E-38 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_03020 d2d768d563e474a3e7b94760105fe7fa 373 Pfam PF01817 Chorismate mutase type II 9 83 7.2E-20 T 01-11-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D3790_03020 d2d768d563e474a3e7b94760105fe7fa 373 SUPERFAMILY SSF48179 241 367 3.97E-42 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D3790_03020 d2d768d563e474a3e7b94760105fe7fa 373 Gene3D G3DSA:3.40.50.720 81 246 5.9E-44 T 01-11-2018 D3790_03020 d2d768d563e474a3e7b94760105fe7fa 373 PIRSF PIRSF001499 1 373 6.1E-173 T 01-11-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 D3790_03020 d2d768d563e474a3e7b94760105fe7fa 373 SMART SM00830 9 89 1.1E-29 T 01-11-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D3790_03020 d2d768d563e474a3e7b94760105fe7fa 373 SUPERFAMILY SSF48600 4 89 3.3E-24 T 01-11-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D3790_03020 d2d768d563e474a3e7b94760105fe7fa 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 6.8E-42 T 01-11-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 D3790_03020 d2d768d563e474a3e7b94760105fe7fa 373 Gene3D G3DSA:1.10.3660.10 248 373 1.1E-50 T 01-11-2018 D3790_03020 d2d768d563e474a3e7b94760105fe7fa 373 Pfam PF02153 Prephenate dehydrogenase 139 344 7.9E-32 T 01-11-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 D3790_16275 71923e0d995c9901638541f815c1d7bd 165 Gene3D G3DSA:3.10.50.30 79 158 9.2E-32 T 01-11-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 D3790_16275 71923e0d995c9901638541f815c1d7bd 165 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 01-11-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 D3790_16275 71923e0d995c9901638541f815c1d7bd 165 SUPERFAMILY SSF46557 4 79 4.05E-26 T 01-11-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 D3790_16275 71923e0d995c9901638541f815c1d7bd 165 Pfam PF03449 Transcription elongation factor, N-terminal 6 75 4.5E-24 T 01-11-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 D3790_16275 71923e0d995c9901638541f815c1d7bd 165 Gene3D G3DSA:1.10.287.180 2 77 4.3E-28 T 01-11-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 D3790_16275 71923e0d995c9901638541f815c1d7bd 165 PIRSF PIRSF006092 1 158 1.7E-55 T 01-11-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 D3790_16275 71923e0d995c9901638541f815c1d7bd 165 Hamap MF_00930 Transcription elongation factor GreB [greB]. 2 157 51.768 T 01-11-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 D3790_16275 71923e0d995c9901638541f815c1d7bd 165 SUPERFAMILY SSF54534 81 156 3.53E-23 T 01-11-2018 D3790_16275 71923e0d995c9901638541f815c1d7bd 165 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 155 28.276 T 01-11-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 D3790_16275 71923e0d995c9901638541f815c1d7bd 165 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 01-11-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 D3790_16275 71923e0d995c9901638541f815c1d7bd 165 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 155 5.8E-26 T 01-11-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 D3790_16275 71923e0d995c9901638541f815c1d7bd 165 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 4 157 1.9E-69 T 01-11-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 D3790_15375 fe02da468f56a8e7907ecb26a5ae047e 460 Gene3D G3DSA:1.20.1720.10 13 246 1.7E-42 T 01-11-2018 D3790_15375 fe02da468f56a8e7907ecb26a5ae047e 460 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 2.7E-7 T 01-11-2018 D3790_15375 fe02da468f56a8e7907ecb26a5ae047e 460 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 2.7E-7 T 01-11-2018 D3790_15375 fe02da468f56a8e7907ecb26a5ae047e 460 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 2.7E-7 T 01-11-2018 D3790_15375 fe02da468f56a8e7907ecb26a5ae047e 460 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 2.7E-7 T 01-11-2018 D3790_15375 fe02da468f56a8e7907ecb26a5ae047e 460 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 2.7E-7 T 01-11-2018 D3790_15375 fe02da468f56a8e7907ecb26a5ae047e 460 SUPERFAMILY SSF103473 13 452 8.37E-59 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_15375 fe02da468f56a8e7907ecb26a5ae047e 460 Pfam PF07690 Major Facilitator Superfamily 16 405 1.7E-40 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_15375 fe02da468f56a8e7907ecb26a5ae047e 460 Gene3D G3DSA:1.20.1250.20 256 456 4.7E-14 T 01-11-2018 D3790_15375 fe02da468f56a8e7907ecb26a5ae047e 460 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 434 1.1E-74 T 01-11-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 D3790_14545 d1a121a6b29148a8b7ee8246830bf9c6 167 SUPERFAMILY SSF89562 2 158 5.62E-43 T 01-11-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily D3790_14545 d1a121a6b29148a8b7ee8246830bf9c6 167 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.5E-62 T 01-11-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 D3790_14545 d1a121a6b29148a8b7ee8246830bf9c6 167 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.518 T 01-11-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 D3790_14545 d1a121a6b29148a8b7ee8246830bf9c6 167 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 160 8.9E-85 T 01-11-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 D3790_14545 d1a121a6b29148a8b7ee8246830bf9c6 167 Gene3D G3DSA:3.50.30.40 1 161 1.3E-60 T 01-11-2018 D3790_14545 d1a121a6b29148a8b7ee8246830bf9c6 167 Pfam PF03737 Aldolase/RraA 5 152 1.4E-36 T 01-11-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein D3790_06845 4e24038051979525ef4740269eb25301 151 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 144 1.3E-50 T 01-11-2018 IPR003791 Protein of unknown function UPF0178 D3790_06845 4e24038051979525ef4740269eb25301 151 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.185 T 01-11-2018 IPR003791 Protein of unknown function UPF0178 D3790_00715 4aae65a31d6ddff7ea387018665ffd24 170 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 37.323 T 01-11-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D3790_00715 4aae65a31d6ddff7ea387018665ffd24 170 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 170 5.9E-54 T 01-11-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D3790_00715 4aae65a31d6ddff7ea387018665ffd24 170 Gene3D G3DSA:2.40.50.140 1 115 7.1E-49 T 01-11-2018 D3790_00715 4aae65a31d6ddff7ea387018665ffd24 170 Pfam PF00436 Single-strand binding protein family 6 112 1.5E-40 T 01-11-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 D3790_00715 4aae65a31d6ddff7ea387018665ffd24 170 SUPERFAMILY SSF50249 4 170 2.54E-52 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_00715 4aae65a31d6ddff7ea387018665ffd24 170 PIRSF PIRSF002070 2 161 1.3E-38 T 01-11-2018 D3790_03980 3756afa794f54b38fcafe1b42b75a816 920 SUPERFAMILY SSF56731 118 360 1.01E-34 T 01-11-2018 D3790_03980 3756afa794f54b38fcafe1b42b75a816 920 Gene3D G3DSA:3.40.1360.10 239 356 3.8E-17 T 01-11-2018 D3790_03980 3756afa794f54b38fcafe1b42b75a816 920 SMART SM00400 36 90 4.1E-21 T 01-11-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 D3790_03980 3756afa794f54b38fcafe1b42b75a816 920 Pfam PF01807 CHC2 zinc finger 6 92 1.3E-24 T 01-11-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 D3790_03980 3756afa794f54b38fcafe1b42b75a816 920 Gene3D G3DSA:3.90.980.10 114 236 4.5E-11 T 01-11-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily D3790_03980 3756afa794f54b38fcafe1b42b75a816 920 Pfam PF08275 DNA primase catalytic core, N-terminal domain 125 222 2.4E-6 T 01-11-2018 IPR013264 DNA primase, catalytic core, N-terminal D3790_03980 3756afa794f54b38fcafe1b42b75a816 920 Pfam PF13155 Toprim-like 253 340 7.1E-15 T 01-11-2018 D3790_03980 3756afa794f54b38fcafe1b42b75a816 920 SUPERFAMILY SSF57783 1 96 4.93E-28 T 01-11-2018 D3790_03980 3756afa794f54b38fcafe1b42b75a816 920 Gene3D G3DSA:3.90.580.10 1 98 1.0E-28 T 01-11-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 D3790_04020 3756afa794f54b38fcafe1b42b75a816 920 SUPERFAMILY SSF56731 118 360 1.01E-34 T 01-11-2018 D3790_04020 3756afa794f54b38fcafe1b42b75a816 920 Gene3D G3DSA:3.40.1360.10 239 356 3.8E-17 T 01-11-2018 D3790_04020 3756afa794f54b38fcafe1b42b75a816 920 SMART SM00400 36 90 4.1E-21 T 01-11-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 D3790_04020 3756afa794f54b38fcafe1b42b75a816 920 Pfam PF01807 CHC2 zinc finger 6 92 1.3E-24 T 01-11-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 D3790_04020 3756afa794f54b38fcafe1b42b75a816 920 Gene3D G3DSA:3.90.980.10 114 236 4.5E-11 T 01-11-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily D3790_04020 3756afa794f54b38fcafe1b42b75a816 920 Pfam PF08275 DNA primase catalytic core, N-terminal domain 125 222 2.4E-6 T 01-11-2018 IPR013264 DNA primase, catalytic core, N-terminal D3790_04020 3756afa794f54b38fcafe1b42b75a816 920 Pfam PF13155 Toprim-like 253 340 7.1E-15 T 01-11-2018 D3790_04020 3756afa794f54b38fcafe1b42b75a816 920 SUPERFAMILY SSF57783 1 96 4.93E-28 T 01-11-2018 D3790_04020 3756afa794f54b38fcafe1b42b75a816 920 Gene3D G3DSA:3.90.580.10 1 98 1.0E-28 T 01-11-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 D3790_10690 1babf34554ce86c9f3be5a1e92c9a19d 402 Pfam PF02687 FtsX-like permease family 307 395 4.1E-9 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 D3790_10690 1babf34554ce86c9f3be5a1e92c9a19d 402 Pfam PF12704 MacB-like periplasmic core domain 32 216 3.5E-21 T 01-11-2018 IPR025857 MacB-like periplasmic core domain D3790_06095 67c4f84883be8afb89e83c7816bffd80 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 2 129 36.72 T 01-11-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 D3790_06095 67c4f84883be8afb89e83c7816bffd80 137 Pfam PF01641 SelR domain 12 127 1.2E-52 T 01-11-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 D3790_06095 67c4f84883be8afb89e83c7816bffd80 137 Gene3D G3DSA:2.170.150.20 4 136 2.4E-60 T 01-11-2018 D3790_06095 67c4f84883be8afb89e83c7816bffd80 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 10 135 7.8E-60 T 01-11-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 D3790_06095 67c4f84883be8afb89e83c7816bffd80 137 SUPERFAMILY SSF51316 10 133 1.31E-56 T 01-11-2018 IPR011057 Mss4-like superfamily D3790_02480 eb4fb473d8e8afa55620cc02c64b2cf7 302 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 57.349 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D3790_02480 eb4fb473d8e8afa55620cc02c64b2cf7 302 Pfam PF01218 Coproporphyrinogen III oxidase 8 302 4.2E-132 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D3790_02480 eb4fb473d8e8afa55620cc02c64b2cf7 302 Gene3D G3DSA:3.40.1500.10 2 302 2.1E-135 T 01-11-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D3790_02480 eb4fb473d8e8afa55620cc02c64b2cf7 302 SUPERFAMILY SSF102886 5 302 1.44E-139 T 01-11-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D3790_02480 eb4fb473d8e8afa55620cc02c64b2cf7 302 PIRSF PIRSF000166 2 302 1.6E-128 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D3790_02480 eb4fb473d8e8afa55620cc02c64b2cf7 302 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 01-11-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D3790_02480 eb4fb473d8e8afa55620cc02c64b2cf7 302 PRINTS PR00073 Coprogen oxidase signature 162 191 8.4E-84 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D3790_02480 eb4fb473d8e8afa55620cc02c64b2cf7 302 PRINTS PR00073 Coprogen oxidase signature 234 261 8.4E-84 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D3790_02480 eb4fb473d8e8afa55620cc02c64b2cf7 302 PRINTS PR00073 Coprogen oxidase signature 31 47 8.4E-84 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D3790_02480 eb4fb473d8e8afa55620cc02c64b2cf7 302 PRINTS PR00073 Coprogen oxidase signature 90 114 8.4E-84 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D3790_02480 eb4fb473d8e8afa55620cc02c64b2cf7 302 PRINTS PR00073 Coprogen oxidase signature 125 147 8.4E-84 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D3790_02480 eb4fb473d8e8afa55620cc02c64b2cf7 302 PRINTS PR00073 Coprogen oxidase signature 48 69 8.4E-84 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D3790_02480 eb4fb473d8e8afa55620cc02c64b2cf7 302 PRINTS PR00073 Coprogen oxidase signature 262 288 8.4E-84 T 01-11-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D3790_08385 844cb66752fc7644bc3079a5772557fa 222 Gene3D G3DSA:1.10.530.10 39 218 1.2E-45 T 01-11-2018 D3790_08385 844cb66752fc7644bc3079a5772557fa 222 SUPERFAMILY SSF53955 54 219 3.38E-30 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily D3790_08385 844cb66752fc7644bc3079a5772557fa 222 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 76 104 - T 01-11-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 D3790_08385 844cb66752fc7644bc3079a5772557fa 222 Pfam PF01464 Transglycosylase SLT domain 59 183 7.7E-28 T 01-11-2018 IPR008258 Transglycosylase SLT domain 1 D3790_10845 fb8e02e7cf9e93f75bae7a467227c483 528 SUPERFAMILY SSF52777 286 527 4.27E-80 T 01-11-2018 D3790_10845 fb8e02e7cf9e93f75bae7a467227c483 528 SUPERFAMILY SSF47005 219 264 2.22E-13 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 D3790_10845 fb8e02e7cf9e93f75bae7a467227c483 528 Gene3D G3DSA:2.40.50.100 102 179 2.6E-20 T 01-11-2018 D3790_10845 fb8e02e7cf9e93f75bae7a467227c483 528 Gene3D G3DSA:2.40.50.100 1 78 1.0E-20 T 01-11-2018 D3790_10845 fb8e02e7cf9e93f75bae7a467227c483 528 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 01-11-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 D3790_10845 fb8e02e7cf9e93f75bae7a467227c483 528 Pfam PF02817 e3 binding domain 225 260 4.9E-15 T 01-11-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 D3790_10845 fb8e02e7cf9e93f75bae7a467227c483 528 Gene3D G3DSA:4.10.320.10 225 270 4.2E-22 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 D3790_10845 fb8e02e7cf9e93f75bae7a467227c483 528 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 297 527 3.7E-80 T 01-11-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 D3790_10845 fb8e02e7cf9e93f75bae7a467227c483 528 SUPERFAMILY SSF51230 102 191 3.27E-22 T 01-11-2018 IPR011053 Single hybrid motif D3790_10845 fb8e02e7cf9e93f75bae7a467227c483 528 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 92 528 3.4E-216 T 01-11-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 D3790_10845 fb8e02e7cf9e93f75bae7a467227c483 528 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 125 154 - T 01-11-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 D3790_10845 fb8e02e7cf9e93f75bae7a467227c483 528 Pfam PF00364 Biotin-requiring enzyme 4 73 8.9E-22 T 01-11-2018 IPR000089 Biotin/lipoyl attachment D3790_10845 fb8e02e7cf9e93f75bae7a467227c483 528 Pfam PF00364 Biotin-requiring enzyme 103 173 1.8E-21 T 01-11-2018 IPR000089 Biotin/lipoyl attachment D3790_10845 fb8e02e7cf9e93f75bae7a467227c483 528 SUPERFAMILY SSF51230 1 86 7.33E-22 T 01-11-2018 IPR011053 Single hybrid motif D3790_10845 fb8e02e7cf9e93f75bae7a467227c483 528 Gene3D G3DSA:3.30.559.10 280 528 3.8E-100 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_17495 02d18c05230e8ed41e375cb1ad493ddc 283 Pfam PF03668 P-loop ATPase protein family 1 282 4.6E-144 T 01-11-2018 IPR005337 RapZ-like family GO:0005524 D3790_17495 02d18c05230e8ed41e375cb1ad493ddc 283 PIRSF PIRSF005052 1 283 3.2E-114 T 01-11-2018 IPR005337 RapZ-like family GO:0005524 D3790_17495 02d18c05230e8ed41e375cb1ad493ddc 283 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 41.191 T 01-11-2018 IPR005337 RapZ-like family GO:0005524 D3790_17495 02d18c05230e8ed41e375cb1ad493ddc 283 SUPERFAMILY SSF52540 2 151 3.25E-13 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_02995 09f30701ea45888ae7dd5900e11fab45 182 Pfam PF05239 PRC-barrel domain 105 177 5.4E-10 T 01-11-2018 IPR027275 PRC-barrel domain D3790_02995 09f30701ea45888ae7dd5900e11fab45 182 SUPERFAMILY SSF50346 106 182 1.51E-19 T 01-11-2018 IPR011033 PRC-barrel-like superfamily D3790_02995 09f30701ea45888ae7dd5900e11fab45 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 23.911 T 01-11-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 D3790_02995 09f30701ea45888ae7dd5900e11fab45 182 Gene3D G3DSA:2.30.30.240 101 182 4.7E-32 T 01-11-2018 D3790_02995 09f30701ea45888ae7dd5900e11fab45 182 SUPERFAMILY SSF50447 13 100 1.52E-24 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily D3790_02995 09f30701ea45888ae7dd5900e11fab45 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 3.6E-58 T 01-11-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 D3790_02995 09f30701ea45888ae7dd5900e11fab45 182 Pfam PF01782 RimM N-terminal domain 16 96 8.7E-25 T 01-11-2018 IPR002676 RimM, N-terminal GO:0006364 D3790_02995 09f30701ea45888ae7dd5900e11fab45 182 Gene3D G3DSA:2.40.30.60 5 100 1.8E-33 T 01-11-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 D3790_09495 9fe18dfe0dcf14377c5ac9ab09f862c9 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 01-11-2018 IPR019776 Flagellar basal body rod protein, conserved site D3790_09495 9fe18dfe0dcf14377c5ac9ab09f862c9 134 Pfam PF00460 Flagella basal body rod protein 7 37 6.1E-9 T 01-11-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 D3790_09495 9fe18dfe0dcf14377c5ac9ab09f862c9 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 88 131 1.3E-11 T 01-11-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D3790_09495 9fe18dfe0dcf14377c5ac9ab09f862c9 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 2.4E-51 T 01-11-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 D3790_15910 1661b377cc8b8e728b4a98b866055670 397 SUPERFAMILY SSF103473 7 390 2.35E-47 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_15910 1661b377cc8b8e728b4a98b866055670 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 15 390 4.3E-91 T 01-11-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 D3790_15910 1661b377cc8b8e728b4a98b866055670 397 Pfam PF07690 Major Facilitator Superfamily 26 354 2.1E-36 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_15910 1661b377cc8b8e728b4a98b866055670 397 Gene3D G3DSA:1.20.1720.10 16 390 3.9E-71 T 01-11-2018 D3790_00085 4efea1427145299f3143966440057f79 371 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 41 365 3.6E-159 T 01-11-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 D3790_00085 4efea1427145299f3143966440057f79 371 Pfam PF08402 TOBE domain 285 365 9.0E-8 T 01-11-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 D3790_00085 4efea1427145299f3143966440057f79 371 Gene3D G3DSA:3.40.50.300 10 228 2.2E-71 T 01-11-2018 D3790_00085 4efea1427145299f3143966440057f79 371 Gene3D G3DSA:2.40.50.140 292 307 2.0E-9 T 01-11-2018 D3790_00085 4efea1427145299f3143966440057f79 371 Pfam PF00005 ABC transporter 27 167 1.7E-36 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_00085 4efea1427145299f3143966440057f79 371 Gene3D G3DSA:2.40.50.940 229 291 2.0E-9 T 01-11-2018 D3790_00085 4efea1427145299f3143966440057f79 371 SUPERFAMILY SSF50331 243 363 1.59E-6 T 01-11-2018 IPR008995 Molybdate/tungstate binding, C-terminal D3790_00085 4efea1427145299f3143966440057f79 371 SUPERFAMILY SSF52540 10 250 1.01E-87 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_00085 4efea1427145299f3143966440057f79 371 SMART SM00382 35 218 8.6E-19 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_00085 4efea1427145299f3143966440057f79 371 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_02910 2993aa707dde25b578f7a6e5536e485a 715 SUPERFAMILY SSF56801 210 714 2.75E-95 T 01-11-2018 D3790_02910 2993aa707dde25b578f7a6e5536e485a 715 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 715 52.078 T 01-11-2018 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 D3790_02910 2993aa707dde25b578f7a6e5536e485a 715 SUPERFAMILY SSF69593 5 171 6.41E-21 T 01-11-2018 D3790_02910 2993aa707dde25b578f7a6e5536e485a 715 Pfam PF00501 AMP-binding enzyme 231 620 7.3E-67 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_02910 2993aa707dde25b578f7a6e5536e485a 715 Gene3D G3DSA:3.40.50.12780 194 615 8.0E-77 T 01-11-2018 D3790_02910 2993aa707dde25b578f7a6e5536e485a 715 Gene3D G3DSA:3.30.300.30 617 714 9.4E-7 T 01-11-2018 D3790_02910 2993aa707dde25b578f7a6e5536e485a 715 Pfam PF01553 Acyltransferase 15 137 2.4E-13 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D3790_02910 2993aa707dde25b578f7a6e5536e485a 715 SMART SM00563 30 140 7.8E-23 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D3790_02910 2993aa707dde25b578f7a6e5536e485a 715 ProSitePatterns PS00455 Putative AMP-binding domain signature. 371 382 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_18350 6d9279d9d48c065f256ed060b90c6f95 148 Gene3D G3DSA:3.40.50.360 1 148 2.1E-43 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_18350 6d9279d9d48c065f256ed060b90c6f95 148 SUPERFAMILY SSF52218 1 148 2.51E-39 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_18350 6d9279d9d48c065f256ed060b90c6f95 148 PRINTS PR00369 Flavodoxin signature 53 64 3.0E-8 T 01-11-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D3790_18350 6d9279d9d48c065f256ed060b90c6f95 148 PRINTS PR00369 Flavodoxin signature 5 18 3.0E-8 T 01-11-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D3790_18350 6d9279d9d48c065f256ed060b90c6f95 148 PRINTS PR00369 Flavodoxin signature 84 94 3.0E-8 T 01-11-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D3790_18350 6d9279d9d48c065f256ed060b90c6f95 148 PRINTS PR00369 Flavodoxin signature 108 127 3.0E-8 T 01-11-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D3790_18350 6d9279d9d48c065f256ed060b90c6f95 148 Pfam PF00258 Flavodoxin 6 129 8.2E-24 T 01-11-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 D3790_10760 92b51e07288ab85fc93630c8c6788c20 413 SUPERFAMILY SSF55021 338 412 1.49E-16 T 01-11-2018 D3790_10760 92b51e07288ab85fc93630c8c6788c20 413 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 01-11-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site D3790_10760 92b51e07288ab85fc93630c8c6788c20 413 SUPERFAMILY SSF52283 7 138 2.76E-50 T 01-11-2018 D3790_10760 92b51e07288ab85fc93630c8c6788c20 413 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 8.0E-51 T 01-11-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 D3790_10760 92b51e07288ab85fc93630c8c6788c20 413 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 1.5E-37 T 01-11-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 D3790_10760 92b51e07288ab85fc93630c8c6788c20 413 Gene3D G3DSA:3.40.50.720 109 297 7.7E-110 T 01-11-2018 D3790_10760 92b51e07288ab85fc93630c8c6788c20 413 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 01-11-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 D3790_10760 92b51e07288ab85fc93630c8c6788c20 413 Gene3D G3DSA:3.30.70.260 328 412 6.5E-31 T 01-11-2018 D3790_10760 92b51e07288ab85fc93630c8c6788c20 413 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 01-11-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site D3790_10760 92b51e07288ab85fc93630c8c6788c20 413 Gene3D G3DSA:3.40.50.720 14 312 7.7E-110 T 01-11-2018 D3790_10760 92b51e07288ab85fc93630c8c6788c20 413 SUPERFAMILY SSF51735 108 295 5.47E-57 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 1.1E-240 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 Gene3D G3DSA:3.10.20.30 3 62 1.4E-21 T 01-11-2018 IPR012675 Beta-grasp domain superfamily D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 33.843 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 SUPERFAMILY SSF55681 243 525 2.39E-95 T 01-11-2018 D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 Gene3D G3DSA:3.40.50.800 532 642 5.4E-31 T 01-11-2018 IPR036621 Anticodon-binding domain superfamily D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 SMART SM00863 170 219 1.2E-18 T 01-11-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 1.0E-13 T 01-11-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 SUPERFAMILY SSF52954 529 636 1.51E-32 T 01-11-2018 D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 Pfam PF02824 TGS domain 4 61 7.1E-11 T 01-11-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 1.4E-54 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 1.4E-54 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 1.4E-54 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 1.4E-54 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 1.4E-54 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 SUPERFAMILY SSF55186 63 241 7.06E-64 T 01-11-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 529 1.5E-50 T 01-11-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 SUPERFAMILY SSF81271 3 61 8.5E-15 T 01-11-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 Gene3D G3DSA:3.30.930.10 223 531 2.3E-129 T 01-11-2018 D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 Pfam PF03129 Anticodon binding domain 541 629 1.3E-21 T 01-11-2018 IPR004154 Anticodon-binding D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 Gene3D G3DSA:3.30.980.10 69 222 4.3E-61 T 01-11-2018 D3790_08380 dccee3c4c3312b56d3565d9ee2302894 642 Gene3D G3DSA:3.30.54.20 130 187 4.3E-61 T 01-11-2018 D3790_06135 05322cd58ef1e247f3d0bc3e84cefe3c 629 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 331 551 2.4E-52 T 01-11-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 D3790_06135 05322cd58ef1e247f3d0bc3e84cefe3c 629 Gene3D G3DSA:3.40.1750.10 189 509 8.2E-156 T 01-11-2018 D3790_06135 05322cd58ef1e247f3d0bc3e84cefe3c 629 SUPERFAMILY SSF52096 321 541 8.01E-40 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily D3790_06135 05322cd58ef1e247f3d0bc3e84cefe3c 629 Gene3D G3DSA:3.90.226.10 319 552 8.2E-156 T 01-11-2018 D3790_06135 05322cd58ef1e247f3d0bc3e84cefe3c 629 Pfam PF01343 Peptidase family S49 141 269 1.7E-33 T 01-11-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 D3790_06135 05322cd58ef1e247f3d0bc3e84cefe3c 629 Pfam PF01343 Peptidase family S49 405 554 1.7E-45 T 01-11-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 D3790_06135 05322cd58ef1e247f3d0bc3e84cefe3c 629 SUPERFAMILY SSF52096 33 285 1.62E-23 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily D3790_06135 05322cd58ef1e247f3d0bc3e84cefe3c 629 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 619 1.5E-202 T 01-11-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 D3790_06135 05322cd58ef1e247f3d0bc3e84cefe3c 629 PIRSF PIRSF001217 8 629 8.1E-210 T 01-11-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 D3790_06135 05322cd58ef1e247f3d0bc3e84cefe3c 629 Gene3D G3DSA:3.90.226.10 97 318 8.2E-156 T 01-11-2018 D3790_12180 7c00dc4453af16468eb54f99669a99c4 254 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 245 1.7E-119 T 01-11-2018 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68 D3790_12180 7c00dc4453af16468eb54f99669a99c4 254 Gene3D G3DSA:3.90.850.10 37 249 2.8E-79 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 D3790_12180 7c00dc4453af16468eb54f99669a99c4 254 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 47 243 3.0E-61 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 D3790_12180 7c00dc4453af16468eb54f99669a99c4 254 SUPERFAMILY SSF56529 37 248 6.93E-75 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 D3790_11870 e1bba34f23daf2a5d8fef5236ddcc32c 215 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 214 9.0E-82 T 01-11-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 D3790_11870 e1bba34f23daf2a5d8fef5236ddcc32c 215 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 01-11-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 D3790_11870 e1bba34f23daf2a5d8fef5236ddcc32c 215 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 01-11-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 D3790_11870 e1bba34f23daf2a5d8fef5236ddcc32c 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 7.4E-46 T 01-11-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 D3790_11870 e1bba34f23daf2a5d8fef5236ddcc32c 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 7.4E-46 T 01-11-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 D3790_11870 e1bba34f23daf2a5d8fef5236ddcc32c 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 162 174 7.4E-46 T 01-11-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 D3790_11870 e1bba34f23daf2a5d8fef5236ddcc32c 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 7.4E-46 T 01-11-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 D3790_11870 e1bba34f23daf2a5d8fef5236ddcc32c 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 7.4E-46 T 01-11-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 D3790_11870 e1bba34f23daf2a5d8fef5236ddcc32c 215 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 201 39.14 T 01-11-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 D3790_11870 e1bba34f23daf2a5d8fef5236ddcc32c 215 SUPERFAMILY SSF53182 1 212 6.02E-72 T 01-11-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 D3790_11870 e1bba34f23daf2a5d8fef5236ddcc32c 215 Pfam PF01470 Pyroglutamyl peptidase 3 202 8.7E-79 T 01-11-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 D3790_11870 e1bba34f23daf2a5d8fef5236ddcc32c 215 PIRSF PIRSF015592 1 213 7.5E-82 T 01-11-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 D3790_11870 e1bba34f23daf2a5d8fef5236ddcc32c 215 Gene3D G3DSA:3.40.630.20 1 215 1.1E-80 T 01-11-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 D3790_17910 bb810546d57ce41cb9e0dff15b966205 112 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 6 106 2.0E-17 T 01-11-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor D3790_17910 bb810546d57ce41cb9e0dff15b966205 112 Gene3D G3DSA:2.40.10.270 1 111 1.9E-38 T 01-11-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily D3790_17910 bb810546d57ce41cb9e0dff15b966205 112 Pfam PF05521 Phage head-tail joining protein 7 105 9.5E-25 T 01-11-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor D3790_18495 ca2ff766aaa25ce4549a77e5012a6085 87 Gene3D G3DSA:2.30.30.400 11 87 5.3E-28 T 01-11-2018 IPR038626 Rof-like superfamily D3790_18495 ca2ff766aaa25ce4549a77e5012a6085 87 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 10 83 1.6E-25 T 01-11-2018 IPR009778 Modulator of Rho-dependent transcription termination D3790_18495 ca2ff766aaa25ce4549a77e5012a6085 87 SUPERFAMILY SSF101744 5 85 5.02E-27 T 01-11-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 D3790_09780 9bd93664692551add3d76730abaa509c 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 4.5E-17 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 D3790_09780 9bd93664692551add3d76730abaa509c 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 53 64 4.5E-17 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 D3790_09780 9bd93664692551add3d76730abaa509c 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 318 335 4.5E-17 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 D3790_09780 9bd93664692551add3d76730abaa509c 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 4.5E-17 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 D3790_09780 9bd93664692551add3d76730abaa509c 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 233 245 4.5E-17 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 D3790_09780 9bd93664692551add3d76730abaa509c 363 Pfam PF00267 Gram-negative porin 27 363 8.7E-147 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 D3790_09780 9bd93664692551add3d76730abaa509c 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 2.3E-63 T 01-11-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 D3790_09780 9bd93664692551add3d76730abaa509c 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 271 290 2.3E-63 T 01-11-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 D3790_09780 9bd93664692551add3d76730abaa509c 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 151 173 2.3E-63 T 01-11-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 D3790_09780 9bd93664692551add3d76730abaa509c 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 239 256 2.3E-63 T 01-11-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 D3790_09780 9bd93664692551add3d76730abaa509c 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 2.3E-63 T 01-11-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 D3790_09780 9bd93664692551add3d76730abaa509c 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 52 70 2.3E-63 T 01-11-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 D3790_09780 9bd93664692551add3d76730abaa509c 363 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 318 334 - T 01-11-2018 IPR013793 Porin, Gram-negative type, conserved site D3790_09780 9bd93664692551add3d76730abaa509c 363 SUPERFAMILY SSF56935 22 363 5.95E-71 T 01-11-2018 D3790_09780 9bd93664692551add3d76730abaa509c 363 Gene3D G3DSA:2.40.160.10 22 363 3.0E-140 T 01-11-2018 IPR023614 Porin domain superfamily D3790_16465 bf463810b7b06275dc23fd7596646bdc 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 316 8.0E-26 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 D3790_16465 bf463810b7b06275dc23fd7596646bdc 326 Gene3D G3DSA:3.40.50.300 1 322 7.4E-95 T 01-11-2018 D3790_16465 bf463810b7b06275dc23fd7596646bdc 326 SMART SM00382 32 239 7.0E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_16465 bf463810b7b06275dc23fd7596646bdc 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 5.1E-18 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 D3790_16465 bf463810b7b06275dc23fd7596646bdc 326 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_16465 bf463810b7b06275dc23fd7596646bdc 326 Pfam PF00005 ABC transporter 24 181 2.6E-27 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_16465 bf463810b7b06275dc23fd7596646bdc 326 SUPERFAMILY SSF52540 3 253 2.96E-65 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_18925 11cb8f94001ad335c7d9790befd10746 758 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 428 750 2.7E-158 T 01-11-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 D3790_18925 11cb8f94001ad335c7d9790befd10746 758 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 309 8.2E-128 T 01-11-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 D3790_18925 11cb8f94001ad335c7d9790befd10746 758 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 755 37.349 T 01-11-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 D3790_18925 11cb8f94001ad335c7d9790befd10746 758 SUPERFAMILY SSF51726 393 753 3.92E-119 T 01-11-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 D3790_18925 11cb8f94001ad335c7d9790befd10746 758 Gene3D G3DSA:3.20.20.210 7 521 0.0 T 01-11-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 D3790_18925 11cb8f94001ad335c7d9790befd10746 758 PIRSF PIRSF000382 2 758 0.0 T 01-11-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 D3790_18925 11cb8f94001ad335c7d9790befd10746 758 SUPERFAMILY SSF51726 5 391 1.57E-116 T 01-11-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 D3790_18925 11cb8f94001ad335c7d9790befd10746 758 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 754 0.0 T 01-11-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 D3790_18925 11cb8f94001ad335c7d9790befd10746 758 Gene3D G3DSA:3.20.20.210 386 753 0.0 T 01-11-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 D3790_17280 c74238f19a5b57ec6ec7b8687e2bad11 341 Gene3D G3DSA:3.40.50.300 112 197 4.2E-7 T 01-11-2018 D3790_17280 c74238f19a5b57ec6ec7b8687e2bad11 341 Pfam PF08273 Zinc-binding domain of primase-helicase 45 84 6.9E-11 T 01-11-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 D3790_17280 c74238f19a5b57ec6ec7b8687e2bad11 341 SMART SM00778 45 84 3.5E-11 T 01-11-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 D3790_17280 c74238f19a5b57ec6ec7b8687e2bad11 341 SUPERFAMILY SSF57783 44 112 5.44E-11 T 01-11-2018 D3790_17280 c74238f19a5b57ec6ec7b8687e2bad11 341 Gene3D G3DSA:1.10.10.10 233 332 3.6E-38 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_17280 c74238f19a5b57ec6ec7b8687e2bad11 341 SUPERFAMILY SSF46785 234 330 3.54E-33 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_17280 c74238f19a5b57ec6ec7b8687e2bad11 341 SUPERFAMILY SSF52540 118 200 3.56E-6 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_17280 c74238f19a5b57ec6ec7b8687e2bad11 341 Pfam PF03288 Poxvirus D5 protein-like 234 329 1.6E-10 T 01-11-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal D3790_13445 acdedd02d37ca8fb844b905c733531e1 92 Gene3D G3DSA:1.10.260.40 3 71 8.6E-33 T 01-11-2018 D3790_13445 acdedd02d37ca8fb844b905c733531e1 92 SUPERFAMILY SSF47413 2 72 1.74E-30 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_13445 acdedd02d37ca8fb844b905c733531e1 92 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 1.3E-37 T 01-11-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain D3790_03735 ff09185eb27c78b6c1a784752e885948 432 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 15 429 6.0E-159 T 01-11-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 D3790_03735 ff09185eb27c78b6c1a784752e885948 432 SUPERFAMILY SSF69304 156 430 5.1E-54 T 01-11-2018 D3790_03735 ff09185eb27c78b6c1a784752e885948 432 Gene3D G3DSA:3.40.50.10070 23 165 2.9E-52 T 01-11-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 D3790_03735 ff09185eb27c78b6c1a784752e885948 432 Gene3D G3DSA:2.120.10.30 166 432 1.6E-110 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like D3790_03735 ff09185eb27c78b6c1a784752e885948 432 Pfam PF07676 WD40-like Beta Propeller Repeat 243 274 5.3E-9 T 01-11-2018 IPR011659 WD40-like Beta Propeller D3790_03735 ff09185eb27c78b6c1a784752e885948 432 Pfam PF07676 WD40-like Beta Propeller Repeat 201 226 0.011 T 01-11-2018 IPR011659 WD40-like Beta Propeller D3790_03735 ff09185eb27c78b6c1a784752e885948 432 Pfam PF07676 WD40-like Beta Propeller Repeat 283 317 2.6E-10 T 01-11-2018 IPR011659 WD40-like Beta Propeller D3790_03735 ff09185eb27c78b6c1a784752e885948 432 Pfam PF07676 WD40-like Beta Propeller Repeat 372 398 0.016 T 01-11-2018 IPR011659 WD40-like Beta Propeller D3790_03735 ff09185eb27c78b6c1a784752e885948 432 SUPERFAMILY SSF52964 29 162 1.44E-40 T 01-11-2018 D3790_03735 ff09185eb27c78b6c1a784752e885948 432 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 5 428 49.114 T 01-11-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 D3790_03735 ff09185eb27c78b6c1a784752e885948 432 Pfam PF04052 TolB amino-terminal domain 24 123 2.0E-32 T 01-11-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 D3790_19660 eac878f9373e66462dfd0b71e0de988e 156 SMART SM00347 29 130 3.2E-14 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_19660 eac878f9373e66462dfd0b71e0de988e 156 SUPERFAMILY SSF46785 9 143 1.78E-26 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_19660 eac878f9373e66462dfd0b71e0de988e 156 Gene3D G3DSA:1.10.10.10 2 145 1.3E-29 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_19660 eac878f9373e66462dfd0b71e0de988e 156 Pfam PF12802 MarR family 35 93 2.9E-9 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_01435 1b64fe2c09fb22357d98c9d79bdd68bb 474 Gene3D G3DSA:1.10.40.30 411 460 4.6E-30 T 01-11-2018 D3790_01435 1b64fe2c09fb22357d98c9d79bdd68bb 474 Pfam PF00206 Lyase 13 345 1.1E-105 T 01-11-2018 IPR022761 Fumarate lyase, N-terminal D3790_01435 1b64fe2c09fb22357d98c9d79bdd68bb 474 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 473 1.3E-259 T 01-11-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 D3790_01435 1b64fe2c09fb22357d98c9d79bdd68bb 474 Gene3D G3DSA:1.10.275.10 6 142 6.0E-58 T 01-11-2018 IPR024083 Fumarase/histidase, N-terminal D3790_01435 1b64fe2c09fb22357d98c9d79bdd68bb 474 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 01-11-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 D3790_01435 1b64fe2c09fb22357d98c9d79bdd68bb 474 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 2.6E-28 T 01-11-2018 IPR000362 Fumarate lyase family D3790_01435 1b64fe2c09fb22357d98c9d79bdd68bb 474 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 2.6E-28 T 01-11-2018 IPR000362 Fumarate lyase family D3790_01435 1b64fe2c09fb22357d98c9d79bdd68bb 474 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 2.6E-28 T 01-11-2018 IPR000362 Fumarate lyase family D3790_01435 1b64fe2c09fb22357d98c9d79bdd68bb 474 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 2.6E-28 T 01-11-2018 IPR000362 Fumarate lyase family D3790_01435 1b64fe2c09fb22357d98c9d79bdd68bb 474 Gene3D G3DSA:1.20.200.10 143 410 2.4E-112 T 01-11-2018 D3790_01435 1b64fe2c09fb22357d98c9d79bdd68bb 474 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 1.4E-5 T 01-11-2018 D3790_01435 1b64fe2c09fb22357d98c9d79bdd68bb 474 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 1.4E-5 T 01-11-2018 D3790_01435 1b64fe2c09fb22357d98c9d79bdd68bb 474 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 1.4E-5 T 01-11-2018 D3790_01435 1b64fe2c09fb22357d98c9d79bdd68bb 474 Pfam PF10415 Fumarase C C-terminus 411 462 4.3E-17 T 01-11-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D3790_01435 1b64fe2c09fb22357d98c9d79bdd68bb 474 SUPERFAMILY SSF48557 2 458 2.06E-140 T 01-11-2018 IPR008948 L-Aspartase-like GO:0003824 D3790_14400 fe2a2ed002c7ddf0627f4e7a4fc7d9ae 366 Gene3D G3DSA:3.40.50.150 13 361 6.0E-146 T 01-11-2018 D3790_14400 fe2a2ed002c7ddf0627f4e7a4fc7d9ae 366 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 347 357 - T 01-11-2018 IPR030391 RNA methyltransferase TrmA, conserved site D3790_14400 fe2a2ed002c7ddf0627f4e7a4fc7d9ae 366 Gene3D G3DSA:3.40.1350.30 44 188 6.0E-146 T 01-11-2018 D3790_14400 fe2a2ed002c7ddf0627f4e7a4fc7d9ae 366 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 3 365 43.156 T 01-11-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 D3790_14400 fe2a2ed002c7ddf0627f4e7a4fc7d9ae 366 SUPERFAMILY SSF53335 5 364 1.22E-54 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_14400 fe2a2ed002c7ddf0627f4e7a4fc7d9ae 366 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 298 327 - T 01-11-2018 IPR030390 RNA methyltransferase TrmA, active site D3790_14400 fe2a2ed002c7ddf0627f4e7a4fc7d9ae 366 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 9 365 3.7E-192 T 01-11-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 D3790_14400 fe2a2ed002c7ddf0627f4e7a4fc7d9ae 366 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 9 365 4.3E-188 T 01-11-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 D3790_15135 71c57380c94c30b8c24e74e3c21db33d 368 Pfam PF02661 Fic/DOC family 151 213 2.5E-14 T 01-11-2018 IPR003812 Fido domain D3790_15135 71c57380c94c30b8c24e74e3c21db33d 368 Pfam PF13784 Fic/DOC family N-terminal 28 108 3.5E-23 T 01-11-2018 IPR025758 Fic/DOC N-terminal D3790_15135 71c57380c94c30b8c24e74e3c21db33d 368 PIRSF PIRSF038925 2 360 9.7E-113 T 01-11-2018 IPR026287 Adenosine monophosphate-protein transferase D3790_15135 71c57380c94c30b8c24e74e3c21db33d 368 Gene3D G3DSA:1.10.3290.10 41 282 1.0E-32 T 01-11-2018 IPR036597 Fido-like domain superfamily D3790_15135 71c57380c94c30b8c24e74e3c21db33d 368 SUPERFAMILY SSF140931 94 281 3.53E-31 T 01-11-2018 IPR036597 Fido-like domain superfamily D3790_09145 18d510be935c18ef3fc93d4575c76458 317 SUPERFAMILY SSF47681 235 314 9.15E-24 T 01-11-2018 IPR036733 B transposition protein, C-terminal domain superfamily GO:0003677|GO:0006313 D3790_09145 18d510be935c18ef3fc93d4575c76458 317 Pfam PF09077 Mu B transposition protein, C terminal 236 312 1.5E-28 T 01-11-2018 IPR009084 B transposition protein, C-terminal GO:0003677|GO:0006313 D3790_09145 18d510be935c18ef3fc93d4575c76458 317 Gene3D G3DSA:3.40.50.300 72 212 1.5E-8 T 01-11-2018 D3790_09145 18d510be935c18ef3fc93d4575c76458 317 SUPERFAMILY SSF52540 86 297 8.19E-12 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09145 18d510be935c18ef3fc93d4575c76458 317 Gene3D G3DSA:1.10.260.40 12 71 1.0E-25 T 01-11-2018 D3790_09145 18d510be935c18ef3fc93d4575c76458 317 Gene3D G3DSA:1.10.1180.10 235 317 7.2E-28 T 01-11-2018 IPR036733 B transposition protein, C-terminal domain superfamily GO:0003677|GO:0006313 D3790_09145 18d510be935c18ef3fc93d4575c76458 317 Pfam PF13401 AAA domain 107 219 6.7E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_15105 ea666461aa89839421aece21c50373d3 98 SUPERFAMILY SSF47413 39 83 1.15E-10 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_15105 ea666461aa89839421aece21c50373d3 98 SMART SM00530 38 92 4.6E-8 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_15105 ea666461aa89839421aece21c50373d3 98 Gene3D G3DSA:1.10.260.40 1 96 7.3E-19 T 01-11-2018 D3790_15105 ea666461aa89839421aece21c50373d3 98 Pfam PF01381 Helix-turn-helix 39 82 5.7E-8 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_01095 1e8a228de8fa0d18e060b8b6c645bff2 320 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 179.556 T 01-11-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 D3790_01095 1e8a228de8fa0d18e060b8b6c645bff2 320 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 3.3E-47 T 01-11-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 D3790_01095 1e8a228de8fa0d18e060b8b6c645bff2 320 SUPERFAMILY SSF56059 123 313 4.24E-57 T 01-11-2018 D3790_01095 1e8a228de8fa0d18e060b8b6c645bff2 320 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 313 8.5E-137 T 01-11-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 D3790_01095 1e8a228de8fa0d18e060b8b6c645bff2 320 Gene3D G3DSA:3.40.50.20 7 114 1.8E-119 T 01-11-2018 D3790_01095 1e8a228de8fa0d18e060b8b6c645bff2 320 SUPERFAMILY SSF52440 2 122 5.18E-45 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily D3790_01095 1e8a228de8fa0d18e060b8b6c645bff2 320 Gene3D G3DSA:3.30.1490.20 137 201 1.8E-119 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D3790_01095 1e8a228de8fa0d18e060b8b6c645bff2 320 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 5.5E-79 T 01-11-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 D3790_01095 1e8a228de8fa0d18e060b8b6c645bff2 320 Gene3D G3DSA:3.30.470.20 115 295 1.8E-119 T 01-11-2018 D3790_04340 b264888795b1ef85e86d398e9b7cf2a0 453 Gene3D G3DSA:2.40.160.60 26 453 7.3E-143 T 01-11-2018 D3790_04340 b264888795b1ef85e86d398e9b7cf2a0 453 SUPERFAMILY SSF56935 26 453 1.92E-101 T 01-11-2018 D3790_04340 b264888795b1ef85e86d398e9b7cf2a0 453 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 453 4.2E-137 T 01-11-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) D3790_01020 756527ca471f0bf160406a2392bc3f08 209 PIRSF PIRSF006102 3 209 2.7E-71 T 01-11-2018 IPR003667 NqrDE/RnfAE GO:0016020 D3790_01020 756527ca471f0bf160406a2392bc3f08 209 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.992 T 01-11-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 D3790_01020 756527ca471f0bf160406a2392bc3f08 209 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 1.6E-62 T 01-11-2018 IPR003667 NqrDE/RnfAE GO:0016020 D3790_01020 756527ca471f0bf160406a2392bc3f08 209 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 207 1.7E-105 T 01-11-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 D3790_12505 ce07f04727e19e3019406cf7b8421a39 538 Pfam PF14104 Domain of unknown function (DUF4277) 8 113 5.8E-42 T 01-11-2018 IPR025457 Domain of unknown function DUF4277 D3790_12505 ce07f04727e19e3019406cf7b8421a39 538 Pfam PF01609 Transposase DDE domain 156 461 2.7E-14 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_12505 ce07f04727e19e3019406cf7b8421a39 538 SUPERFAMILY SSF53098 396 484 1.74E-6 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_18945 5326f8ef07c1351582b35ba59e0255c2 260 Pfam PF13350 Tyrosine phosphatase family 13 260 2.1E-56 T 01-11-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type D3790_18945 5326f8ef07c1351582b35ba59e0255c2 260 SUPERFAMILY SSF52799 12 259 6.19E-48 T 01-11-2018 IPR029021 Protein-tyrosine phosphatase-like D3790_18945 5326f8ef07c1351582b35ba59e0255c2 260 Gene3D G3DSA:3.90.190.10 13 259 2.2E-52 T 01-11-2018 IPR029021 Protein-tyrosine phosphatase-like D3790_02670 138202b0130ef11c2cc8730a008cff1e 361 SUPERFAMILY SSF88874 228 360 6.93E-38 T 01-11-2018 D3790_02670 138202b0130ef11c2cc8730a008cff1e 361 Gene3D G3DSA:3.90.1340.10 228 281 2.4E-25 T 01-11-2018 IPR037053 Phage tail collar domain superfamily D3790_02670 138202b0130ef11c2cc8730a008cff1e 361 Pfam PF07484 Phage Tail Collar Domain 233 280 2.3E-10 T 01-11-2018 IPR011083 Phage tail collar domain D3790_09865 e676050b35173bffb5b447d89b3e7895 96 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.8E-30 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_09865 e676050b35173bffb5b447d89b3e7895 96 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 5.3E-52 T 01-11-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 D3790_09865 e676050b35173bffb5b447d89b3e7895 96 SMART SM00411 1 91 1.3E-43 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_09865 e676050b35173bffb5b447d89b3e7895 96 SUPERFAMILY SSF47729 1 91 2.06E-30 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D3790_09865 e676050b35173bffb5b447d89b3e7895 96 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 01-11-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 D3790_09865 e676050b35173bffb5b447d89b3e7895 96 Gene3D G3DSA:4.10.520.10 40 96 1.2E-32 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D3790_09865 e676050b35173bffb5b447d89b3e7895 96 Gene3D G3DSA:4.10.520.10 2 39 1.6E-15 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D3790_09865 e676050b35173bffb5b447d89b3e7895 96 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 9.7E-19 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_09865 e676050b35173bffb5b447d89b3e7895 96 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 9.7E-19 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_09865 e676050b35173bffb5b447d89b3e7895 96 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 9.7E-19 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_09865 e676050b35173bffb5b447d89b3e7895 96 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.605 T 01-11-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 D3790_03855 d07f89630adb95638c1e2f4666926026 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 01-11-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 D3790_03855 d07f89630adb95638c1e2f4666926026 383 Gene3D G3DSA:3.40.640.10 57 284 5.2E-134 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_03855 d07f89630adb95638c1e2f4666926026 383 Gene3D G3DSA:3.90.1150.10 40 375 5.2E-134 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_03855 d07f89630adb95638c1e2f4666926026 383 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 382 47.56 T 01-11-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 D3790_03855 d07f89630adb95638c1e2f4666926026 383 SUPERFAMILY SSF53383 5 378 1.58E-105 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_03855 d07f89630adb95638c1e2f4666926026 383 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 379 5.9E-139 T 01-11-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 D3790_03855 d07f89630adb95638c1e2f4666926026 383 Pfam PF00155 Aminotransferase class I and II 41 378 1.4E-63 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D3790_04025 aabb24ad1a71592e4f1465427528157c 113 SMART SM00530 6 61 2.2E-14 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_04025 aabb24ad1a71592e4f1465427528157c 113 Gene3D G3DSA:1.10.260.40 3 103 4.6E-20 T 01-11-2018 D3790_04025 aabb24ad1a71592e4f1465427528157c 113 SUPERFAMILY SSF47413 1 69 3.07E-17 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_04025 aabb24ad1a71592e4f1465427528157c 113 Pfam PF01381 Helix-turn-helix 8 59 2.3E-15 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_03985 aabb24ad1a71592e4f1465427528157c 113 SMART SM00530 6 61 2.2E-14 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_03985 aabb24ad1a71592e4f1465427528157c 113 Gene3D G3DSA:1.10.260.40 3 103 4.6E-20 T 01-11-2018 D3790_03985 aabb24ad1a71592e4f1465427528157c 113 SUPERFAMILY SSF47413 1 69 3.07E-17 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_03985 aabb24ad1a71592e4f1465427528157c 113 Pfam PF01381 Helix-turn-helix 8 59 2.3E-15 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_19320 3bf193466193bc7442fcb3225943c845 446 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 430 2.0E-223 T 01-11-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 D3790_19320 3bf193466193bc7442fcb3225943c845 446 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 444 46.306 T 01-11-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 D3790_19320 3bf193466193bc7442fcb3225943c845 446 SUPERFAMILY SSF52418 74 334 3.53E-89 T 01-11-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 D3790_19320 3bf193466193bc7442fcb3225943c845 446 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 351 422 3.5E-21 T 01-11-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 D3790_19320 3bf193466193bc7442fcb3225943c845 446 Gene3D G3DSA:3.90.1170.30 336 425 1.4E-132 T 01-11-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 D3790_19320 3bf193466193bc7442fcb3225943c845 446 Gene3D G3DSA:3.40.1030.10 80 335 1.4E-132 T 01-11-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 D3790_19320 3bf193466193bc7442fcb3225943c845 446 PIRSF PIRSF000478 1 437 3.3E-154 T 01-11-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 D3790_19320 3bf193466193bc7442fcb3225943c845 446 SMART SM00941 350 424 8.0E-28 T 01-11-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 D3790_19320 3bf193466193bc7442fcb3225943c845 446 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 01-11-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 D3790_19320 3bf193466193bc7442fcb3225943c845 446 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 9.2E-50 T 01-11-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 D3790_19320 3bf193466193bc7442fcb3225943c845 446 SUPERFAMILY SSF47648 3 70 1.96E-22 T 01-11-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 D3790_19320 3bf193466193bc7442fcb3225943c845 446 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 421 7.3E-165 T 01-11-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 D3790_19320 3bf193466193bc7442fcb3225943c845 446 Gene3D G3DSA:1.20.970.10 4 68 2.4E-25 T 01-11-2018 D3790_19320 3bf193466193bc7442fcb3225943c845 446 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 4.7E-20 T 01-11-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 D3790_19320 3bf193466193bc7442fcb3225943c845 446 SUPERFAMILY SSF54680 337 431 1.02E-26 T 01-11-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 6.7E-27 T 01-11-2018 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.7E-27 T 01-11-2018 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 6.7E-27 T 01-11-2018 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 6.7E-27 T 01-11-2018 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 6.7E-27 T 01-11-2018 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 325 1.4E-58 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 Gene3D G3DSA:3.30.390.30 344 463 1.5E-32 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 Gene3D G3DSA:3.50.50.60 157 275 1.0E-94 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 1 465 66.401 T 01-11-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 Gene3D G3DSA:3.50.50.60 6 331 1.0E-94 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 1.4E-52 T 01-11-2018 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 1.4E-52 T 01-11-2018 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 1.4E-52 T 01-11-2018 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 1.4E-52 T 01-11-2018 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 1.4E-52 T 01-11-2018 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 1.4E-52 T 01-11-2018 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.4E-52 T 01-11-2018 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 1.4E-52 T 01-11-2018 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.4E-52 T 01-11-2018 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 PIRSF PIRSF000350 2 462 3.5E-71 T 01-11-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 SUPERFAMILY SSF55424 344 462 2.41E-30 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 SUPERFAMILY SSF51905 4 321 7.67E-56 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_14415 93a5e12d5e82b442aaa8d2ce10851a6b 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 456 1.1E-29 T 01-11-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 D3790_05880 a3d0cfd8335ed100a5f31fbfc07157b6 402 Pfam PF00872 Transposase, Mutator family 9 377 2.2E-113 T 01-11-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 D3790_05880 a3d0cfd8335ed100a5f31fbfc07157b6 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 01-11-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 D3790_08455 1c70cde4b77bb986b45f42729cdd3ec1 463 SUPERFAMILY SSF118215 29 442 1.28E-95 T 01-11-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 D3790_08455 1c70cde4b77bb986b45f42729cdd3ec1 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 2.8E-23 T 01-11-2018 D3790_08455 1c70cde4b77bb986b45f42729cdd3ec1 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 2.8E-23 T 01-11-2018 D3790_08455 1c70cde4b77bb986b45f42729cdd3ec1 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 2.8E-23 T 01-11-2018 D3790_08455 1c70cde4b77bb986b45f42729cdd3ec1 463 PRINTS PR00173 Glutamate-aspartate symporter signature 333 359 2.8E-23 T 01-11-2018 D3790_08455 1c70cde4b77bb986b45f42729cdd3ec1 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 2.8E-23 T 01-11-2018 D3790_08455 1c70cde4b77bb986b45f42729cdd3ec1 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 2.8E-23 T 01-11-2018 D3790_08455 1c70cde4b77bb986b45f42729cdd3ec1 463 Gene3D G3DSA:1.10.3860.10 17 461 4.3E-104 T 01-11-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 D3790_08455 1c70cde4b77bb986b45f42729cdd3ec1 463 Pfam PF00375 Sodium:dicarboxylate symporter family 29 442 2.2E-101 T 01-11-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 D3790_18790 717004ccf21f2801aa92fb3796868088 359 TIGRFAM TIGR00492 alr: alanine racemase 3 358 6.6E-137 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_18790 717004ccf21f2801aa92fb3796868088 359 Gene3D G3DSA:2.40.37.10 8 352 1.5E-128 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D3790_18790 717004ccf21f2801aa92fb3796868088 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 1.5E-67 T 01-11-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_18790 717004ccf21f2801aa92fb3796868088 359 SUPERFAMILY SSF50621 227 357 4.53E-43 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D3790_18790 717004ccf21f2801aa92fb3796868088 359 SMART SM01005 233 357 1.8E-59 T 01-11-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_18790 717004ccf21f2801aa92fb3796868088 359 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 1.3E-38 T 01-11-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_18790 717004ccf21f2801aa92fb3796868088 359 Hamap MF_01201 Alanine racemase. 1 357 33.779 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_18790 717004ccf21f2801aa92fb3796868088 359 PRINTS PR00992 Alanine racemase signature 339 352 5.1E-70 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_18790 717004ccf21f2801aa92fb3796868088 359 PRINTS PR00992 Alanine racemase signature 287 304 5.1E-70 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_18790 717004ccf21f2801aa92fb3796868088 359 PRINTS PR00992 Alanine racemase signature 192 219 5.1E-70 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_18790 717004ccf21f2801aa92fb3796868088 359 PRINTS PR00992 Alanine racemase signature 155 166 5.1E-70 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_18790 717004ccf21f2801aa92fb3796868088 359 PRINTS PR00992 Alanine racemase signature 26 42 5.1E-70 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_18790 717004ccf21f2801aa92fb3796868088 359 PRINTS PR00992 Alanine racemase signature 249 264 5.1E-70 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_18790 717004ccf21f2801aa92fb3796868088 359 PRINTS PR00992 Alanine racemase signature 60 78 5.1E-70 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_18790 717004ccf21f2801aa92fb3796868088 359 PRINTS PR00992 Alanine racemase signature 120 132 5.1E-70 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_18790 717004ccf21f2801aa92fb3796868088 359 PRINTS PR00992 Alanine racemase signature 266 281 5.1E-70 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_18790 717004ccf21f2801aa92fb3796868088 359 SUPERFAMILY SSF51419 8 234 9.45E-67 T 01-11-2018 IPR029066 PLP-binding barrel D3790_18790 717004ccf21f2801aa92fb3796868088 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 01-11-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_18790 717004ccf21f2801aa92fb3796868088 359 Gene3D G3DSA:3.20.20.10 10 217 1.5E-128 T 01-11-2018 IPR029066 PLP-binding barrel D3790_15990 694a5f90c3a3c0df6ce0aa7920356e34 146 Pfam PF04965 Gene 25-like lysozyme 34 121 2.6E-17 T 01-11-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD D3790_15990 694a5f90c3a3c0df6ce0aa7920356e34 146 SUPERFAMILY SSF160719 32 137 9.55E-18 T 01-11-2018 D3790_15990 694a5f90c3a3c0df6ce0aa7920356e34 146 Gene3D G3DSA:3.10.450.40 25 140 1.2E-8 T 01-11-2018 D3790_15990 694a5f90c3a3c0df6ce0aa7920356e34 146 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 13 141 1.2E-39 T 01-11-2018 IPR017737 Type VI secretion system, lysozyme-related protein D3790_18285 24e271f2371e4a266f9cc79f2317c36e 365 Gene3D G3DSA:3.30.2300.20 80 175 4.8E-39 T 01-11-2018 D3790_18285 24e271f2371e4a266f9cc79f2317c36e 365 PIRSF PIRSF028774 1 360 2.1E-190 T 01-11-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 D3790_18285 24e271f2371e4a266f9cc79f2317c36e 365 Pfam PF01728 FtsJ-like methyltransferase 186 266 5.6E-7 T 01-11-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 D3790_18285 24e271f2371e4a266f9cc79f2317c36e 365 Gene3D G3DSA:3.40.50.150 176 357 5.7E-58 T 01-11-2018 D3790_18285 24e271f2371e4a266f9cc79f2317c36e 365 SUPERFAMILY SSF53335 184 332 2.62E-12 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_18285 24e271f2371e4a266f9cc79f2317c36e 365 Gene3D G3DSA:3.30.70.2810 1 79 7.4E-35 T 01-11-2018 D3790_18285 24e271f2371e4a266f9cc79f2317c36e 365 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 355 84.49 T 01-11-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 D3790_03175 e2ec0cffabe932522ec2d8e1b61ad9c1 133 Pfam PF03591 AzlC protein 39 101 3.0E-12 T 01-11-2018 IPR011606 Branched-chain amino acid transport, permease D3790_15635 26237f832e136f9abdd3bed3900f1cd5 193 SUPERFAMILY SSF101874 23 190 4.05E-52 T 01-11-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily D3790_15635 26237f832e136f9abdd3bed3900f1cd5 193 Pfam PF04264 YceI-like domain 28 187 1.5E-37 T 01-11-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like D3790_15635 26237f832e136f9abdd3bed3900f1cd5 193 Gene3D G3DSA:2.40.128.110 24 192 4.3E-52 T 01-11-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily D3790_15635 26237f832e136f9abdd3bed3900f1cd5 193 SMART SM00867 25 189 3.4E-64 T 01-11-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like D3790_16900 5afa999a48a6567840e7336ff040ef96 302 Gene3D G3DSA:3.40.50.10490 2 221 3.1E-83 T 01-11-2018 D3790_16900 5afa999a48a6567840e7336ff040ef96 302 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 188 205 - T 01-11-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 D3790_16900 5afa999a48a6567840e7336ff040ef96 302 SUPERFAMILY SSF53697 8 252 4.0E-71 T 01-11-2018 D3790_16900 5afa999a48a6567840e7336ff040ef96 302 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 5 298 43.033 T 01-11-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 D3790_16900 5afa999a48a6567840e7336ff040ef96 302 Gene3D G3DSA:1.10.8.1080 222 300 5.9E-31 T 01-11-2018 D3790_16900 5afa999a48a6567840e7336ff040ef96 302 Pfam PF01380 SIS domain 132 212 7.3E-8 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 D3790_16900 5afa999a48a6567840e7336ff040ef96 302 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 9 298 4.1E-133 T 01-11-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 D3790_04455 4913337671e3a3c520bb66d030e0864e 85 Pfam PF00381 PTS HPr component phosphorylation site 3 81 1.1E-27 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like D3790_04455 4913337671e3a3c520bb66d030e0864e 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 01-11-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site D3790_04455 4913337671e3a3c520bb66d030e0864e 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 5.1E-19 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like D3790_04455 4913337671e3a3c520bb66d030e0864e 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 5.1E-19 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like D3790_04455 4913337671e3a3c520bb66d030e0864e 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 5.1E-19 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like D3790_04455 4913337671e3a3c520bb66d030e0864e 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 2.2E-29 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like D3790_04455 4913337671e3a3c520bb66d030e0864e 85 Gene3D G3DSA:3.30.1340.10 1 85 5.8E-34 T 01-11-2018 IPR035895 HPr-like superfamily D3790_04455 4913337671e3a3c520bb66d030e0864e 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 01-11-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site D3790_04455 4913337671e3a3c520bb66d030e0864e 85 SUPERFAMILY SSF55594 1 81 5.63E-27 T 01-11-2018 IPR035895 HPr-like superfamily D3790_11350 667bcaa75e3ec0eb82cf55914566aa62 132 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 119 6.5E-29 T 01-11-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 D3790_11350 667bcaa75e3ec0eb82cf55914566aa62 132 PIRSF PIRSF003230 1 132 2.3E-24 T 01-11-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 D3790_11350 667bcaa75e3ec0eb82cf55914566aa62 132 Pfam PF13279 Thioesterase-like superfamily 11 120 1.3E-18 T 01-11-2018 D3790_11350 667bcaa75e3ec0eb82cf55914566aa62 132 SUPERFAMILY SSF54637 5 131 2.04E-34 T 01-11-2018 IPR029069 HotDog domain superfamily D3790_11350 667bcaa75e3ec0eb82cf55914566aa62 132 Gene3D G3DSA:3.10.129.10 1 131 1.7E-35 T 01-11-2018 D3790_13620 0af2d315ec11726f1e320d5abee558fb 153 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 3.8E-41 T 01-11-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 D3790_13620 0af2d315ec11726f1e320d5abee558fb 153 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 2.3E-53 T 01-11-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 D3790_13620 0af2d315ec11726f1e320d5abee558fb 153 Gene3D G3DSA:3.40.50.300 1 153 5.4E-48 T 01-11-2018 D3790_13620 0af2d315ec11726f1e320d5abee558fb 153 SUPERFAMILY SSF52540 26 140 2.54E-24 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_10855 68a1efdd8d92f68923ef4e62277be3f9 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.1E-8 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_10855 68a1efdd8d92f68923ef4e62277be3f9 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.1E-8 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_10855 68a1efdd8d92f68923ef4e62277be3f9 254 SMART SM00345 15 74 7.5E-26 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_10855 68a1efdd8d92f68923ef4e62277be3f9 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.9E-22 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_10855 68a1efdd8d92f68923ef4e62277be3f9 254 Gene3D G3DSA:1.10.10.10 1 75 1.2E-26 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_10855 68a1efdd8d92f68923ef4e62277be3f9 254 Gene3D G3DSA:1.20.120.530 97 236 1.7E-26 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D3790_10855 68a1efdd8d92f68923ef4e62277be3f9 254 SMART SM00895 99 227 5.4E-14 T 01-11-2018 IPR011711 GntR, C-terminal D3790_10855 68a1efdd8d92f68923ef4e62277be3f9 254 SUPERFAMILY SSF48008 95 235 1.73E-18 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D3790_10855 68a1efdd8d92f68923ef4e62277be3f9 254 SUPERFAMILY SSF46785 6 77 1.07E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_10855 68a1efdd8d92f68923ef4e62277be3f9 254 Pfam PF07729 FCD domain 99 226 3.7E-17 T 01-11-2018 IPR011711 GntR, C-terminal D3790_13035 5373def29bc93eacbdc0eeeb64fd95c7 113 SUPERFAMILY SSF63380 14 57 6.81E-9 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel D3790_13035 5373def29bc93eacbdc0eeeb64fd95c7 113 SUPERFAMILY SSF52343 45 107 1.2E-10 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3790_13035 5373def29bc93eacbdc0eeeb64fd95c7 113 Pfam PF00175 Oxidoreductase NAD-binding domain 69 110 2.9E-4 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 D3790_13035 5373def29bc93eacbdc0eeeb64fd95c7 113 Gene3D G3DSA:2.40.30.10 6 55 5.9E-6 T 01-11-2018 D3790_13035 5373def29bc93eacbdc0eeeb64fd95c7 113 Gene3D G3DSA:3.40.50.80 56 113 1.1E-6 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3790_08635 621696410d648382b2d765ecaffdd00e 453 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 7.5E-31 T 01-11-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 D3790_08635 621696410d648382b2d765ecaffdd00e 453 Pfam PF02601 Exonuclease VII, large subunit 126 440 4.5E-101 T 01-11-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 D3790_08635 621696410d648382b2d765ecaffdd00e 453 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 29.676 T 01-11-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 D3790_08635 621696410d648382b2d765ecaffdd00e 453 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 355 3.3E-134 T 01-11-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 D3790_18580 0c696dda675fc32e8bc77dc7f65d1d18 119 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 6 106 1.7E-17 T 01-11-2018 IPR006448 Putative phage terminase, small subunit, P27 family D3790_18580 0c696dda675fc32e8bc77dc7f65d1d18 119 Pfam PF05119 Phage terminase, small subunit 15 108 4.0E-20 T 01-11-2018 IPR006448 Putative phage terminase, small subunit, P27 family D3790_16685 6cce98112e78c98db5d7aa6b10ca797e 182 SMART SM00530 11 66 1.8E-12 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_16685 6cce98112e78c98db5d7aa6b10ca797e 182 Pfam PF01381 Helix-turn-helix 16 64 3.4E-13 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_16685 6cce98112e78c98db5d7aa6b10ca797e 182 Gene3D G3DSA:1.10.260.40 2 77 6.1E-17 T 01-11-2018 D3790_16685 6cce98112e78c98db5d7aa6b10ca797e 182 SUPERFAMILY SSF47413 5 71 1.58E-15 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_16685 6cce98112e78c98db5d7aa6b10ca797e 182 Pfam PF07883 Cupin domain 112 171 1.6E-7 T 01-11-2018 IPR013096 Cupin 2, conserved barrel D3790_16685 6cce98112e78c98db5d7aa6b10ca797e 182 Gene3D G3DSA:2.60.120.10 92 182 5.2E-15 T 01-11-2018 IPR014710 RmlC-like jelly roll fold D3790_16685 6cce98112e78c98db5d7aa6b10ca797e 182 SUPERFAMILY SSF51182 59 178 7.93E-22 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily D3790_15400 ac1ab7479e0ec1f2e40ec14b11c565ef 501 Gene3D G3DSA:1.20.58.1510 283 494 4.1E-39 T 01-11-2018 D3790_15400 ac1ab7479e0ec1f2e40ec14b11c565ef 501 Pfam PF12592 Protein of unknown function (DUF3763) 444 496 5.8E-20 T 01-11-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 D3790_15400 ac1ab7479e0ec1f2e40ec14b11c565ef 501 Gene3D G3DSA:1.10.8.300 218 281 5.1E-25 T 01-11-2018 D3790_15400 ac1ab7479e0ec1f2e40ec14b11c565ef 501 SMART SM00382 34 183 4.6E-6 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_15400 ac1ab7479e0ec1f2e40ec14b11c565ef 501 Pfam PF07728 AAA domain (dynein-related subfamily) 37 167 2.6E-24 T 01-11-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 D3790_15400 ac1ab7479e0ec1f2e40ec14b11c565ef 501 Gene3D G3DSA:3.40.50.300 1 217 4.9E-61 T 01-11-2018 D3790_15400 ac1ab7479e0ec1f2e40ec14b11c565ef 501 Gene3D G3DSA:2.40.128.430 327 434 4.1E-39 T 01-11-2018 D3790_15400 ac1ab7479e0ec1f2e40ec14b11c565ef 501 SUPERFAMILY SSF52540 17 275 1.75E-17 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_07485 18b7f42f851aaf0d02abd43872fa03e9 576 Gene3D G3DSA:1.10.730.10 459 576 1.8E-32 T 01-11-2018 D3790_07485 18b7f42f851aaf0d02abd43872fa03e9 576 SUPERFAMILY SSF52374 108 454 2.19E-97 T 01-11-2018 D3790_07485 18b7f42f851aaf0d02abd43872fa03e9 576 Gene3D G3DSA:3.30.1360.70 1 106 8.4E-34 T 01-11-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 D3790_07485 18b7f42f851aaf0d02abd43872fa03e9 576 Gene3D G3DSA:3.40.50.620 111 458 1.9E-110 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_07485 18b7f42f851aaf0d02abd43872fa03e9 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_07485 18b7f42f851aaf0d02abd43872fa03e9 576 Pfam PF00750 tRNA synthetases class I (R) 98 446 4.9E-167 T 01-11-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 D3790_07485 18b7f42f851aaf0d02abd43872fa03e9 576 SUPERFAMILY SSF47323 454 576 1.37E-34 T 01-11-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_07485 18b7f42f851aaf0d02abd43872fa03e9 576 SMART SM01016 5 87 5.7E-28 T 01-11-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D3790_07485 18b7f42f851aaf0d02abd43872fa03e9 576 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 7.7E-21 T 01-11-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D3790_07485 18b7f42f851aaf0d02abd43872fa03e9 576 Pfam PF05746 DALR anticodon binding domain 460 576 7.4E-34 T 01-11-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 D3790_07485 18b7f42f851aaf0d02abd43872fa03e9 576 SUPERFAMILY SSF55190 2 102 1.44E-21 T 01-11-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 D3790_07485 18b7f42f851aaf0d02abd43872fa03e9 576 SMART SM00836 460 576 1.8E-35 T 01-11-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 D3790_07485 18b7f42f851aaf0d02abd43872fa03e9 576 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 576 1.8E-206 T 01-11-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 D3790_07485 18b7f42f851aaf0d02abd43872fa03e9 576 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 576 29.003 T 01-11-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 D3790_07485 18b7f42f851aaf0d02abd43872fa03e9 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 1.1E-25 T 01-11-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 D3790_07485 18b7f42f851aaf0d02abd43872fa03e9 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 1.1E-25 T 01-11-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 D3790_07485 18b7f42f851aaf0d02abd43872fa03e9 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 1.1E-25 T 01-11-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 D3790_07485 18b7f42f851aaf0d02abd43872fa03e9 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 1.1E-25 T 01-11-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 D3790_01590 32985f6ceda7e7f4111ff73d98546e47 179 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 71 175 1.1E-40 T 01-11-2018 IPR021300 Integrating conjugative element protein, PFL4695 D3790_01590 32985f6ceda7e7f4111ff73d98546e47 179 Pfam PF11072 Protein of unknown function (DUF2859) 31 172 2.6E-54 T 01-11-2018 IPR021300 Integrating conjugative element protein, PFL4695 D3790_04905 7953b19575a58713d4797b542935ccf9 466 Pfam PF04575 Protein of unknown function (DUF560) 165 466 4.2E-79 T 01-11-2018 IPR007655 Protein of unknown function DUF560 D3790_04905 7953b19575a58713d4797b542935ccf9 466 SUPERFAMILY SSF81901 58 138 4.18E-7 T 01-11-2018 D3790_04905 7953b19575a58713d4797b542935ccf9 466 Gene3D G3DSA:1.25.40.10 22 187 9.7E-8 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_06270 c47d75f72cd12b99de766940830931eb 285 SUPERFAMILY SSF51197 11 237 9.75E-37 T 01-11-2018 D3790_06270 c47d75f72cd12b99de766940830931eb 285 Pfam PF13621 Cupin-like domain 16 235 5.8E-21 T 01-11-2018 D3790_06270 c47d75f72cd12b99de766940830931eb 285 Gene3D G3DSA:2.60.120.650 4 233 6.0E-37 T 01-11-2018 D3790_06270 c47d75f72cd12b99de766940830931eb 285 SMART SM00558 101 249 9.2E-7 T 01-11-2018 IPR003347 JmjC domain D3790_15645 0411934fde4369c1f6c334b23b54338d 93 SUPERFAMILY SSF47413 24 90 1.66E-14 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_15645 0411934fde4369c1f6c334b23b54338d 93 SMART SM00530 35 90 3.4E-11 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_15645 0411934fde4369c1f6c334b23b54338d 93 Gene3D G3DSA:1.10.260.40 20 91 1.9E-11 T 01-11-2018 D3790_15645 0411934fde4369c1f6c334b23b54338d 93 Pfam PF13560 Helix-turn-helix domain 35 85 1.2E-10 T 01-11-2018 D3790_15740 37e92036d74724502ae8276e6f7434f9 139 Pfam PF01381 Helix-turn-helix 86 137 1.1E-9 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_15740 37e92036d74724502ae8276e6f7434f9 139 SUPERFAMILY SSF47413 81 139 9.6E-8 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_15740 37e92036d74724502ae8276e6f7434f9 139 Gene3D G3DSA:1.10.260.40 83 139 4.4E-7 T 01-11-2018 D3790_15740 37e92036d74724502ae8276e6f7434f9 139 SMART SM00530 84 138 1.8E-8 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_12555 b0a2e879c755a1d28a5a8bfaf5c73a25 191 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 147 9.3E-39 T 01-11-2018 IPR001453 MoaB/Mog domain D3790_12555 b0a2e879c755a1d28a5a8bfaf5c73a25 191 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 01-11-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 D3790_12555 b0a2e879c755a1d28a5a8bfaf5c73a25 191 Pfam PF00994 Probable molybdopterin binding domain 8 147 2.9E-26 T 01-11-2018 IPR001453 MoaB/Mog domain D3790_12555 b0a2e879c755a1d28a5a8bfaf5c73a25 191 SUPERFAMILY SSF53218 4 188 2.88E-45 T 01-11-2018 IPR036425 MoaB/Mog-like domain superfamily D3790_12555 b0a2e879c755a1d28a5a8bfaf5c73a25 191 Gene3D G3DSA:3.40.980.10 1 191 1.5E-62 T 01-11-2018 IPR036425 MoaB/Mog-like domain superfamily D3790_12555 b0a2e879c755a1d28a5a8bfaf5c73a25 191 SMART SM00852 7 153 1.8E-19 T 01-11-2018 IPR001453 MoaB/Mog domain D3790_14580 d556d8477081eb45cca87bcfcf1b32e5 148 Pfam PF05656 Protein of unknown function (DUF805) 8 131 1.4E-17 T 01-11-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 D3790_16000 58e40ddb945dcca699551f8312b298d7 350 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 26 336 1.6E-97 T 01-11-2018 IPR010732 Type VI secretion, TssG-like D3790_16000 58e40ddb945dcca699551f8312b298d7 350 Pfam PF06996 Type VI secretion, TssG 26 336 2.7E-91 T 01-11-2018 IPR010732 Type VI secretion, TssG-like D3790_07025 f57c1a5d748af2ed789f993e219da135 655 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 377 507 4.4E-5 T 01-11-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 D3790_07025 f57c1a5d748af2ed789f993e219da135 655 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 232 339 4.5E-13 T 01-11-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 D3790_07025 f57c1a5d748af2ed789f993e219da135 655 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 390 411 - T 01-11-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 D3790_07025 f57c1a5d748af2ed789f993e219da135 655 Gene3D G3DSA:3.40.640.10 106 474 5.3E-62 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_07025 f57c1a5d748af2ed789f993e219da135 655 SUPERFAMILY SSF53383 25 624 4.02E-71 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_14785 a6f8072d58740a32d7223ca03d370b4f 425 SUPERFAMILY SSF53756 58 419 1.37E-16 T 01-11-2018 D3790_14785 a6f8072d58740a32d7223ca03d370b4f 425 Gene3D G3DSA:3.40.50.2000 217 403 1.2E-68 T 01-11-2018 D3790_14785 a6f8072d58740a32d7223ca03d370b4f 425 Gene3D G3DSA:3.40.50.11720 37 209 6.4E-46 T 01-11-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 D3790_14785 a6f8072d58740a32d7223ca03d370b4f 425 Pfam PF00534 Glycosyl transferases group 1 249 399 8.2E-13 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 D3790_14785 a6f8072d58740a32d7223ca03d370b4f 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 211 1.1E-63 T 01-11-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 D3790_04210 915f14dbb94ce5f4301ed4e284fa4361 259 Pfam PF02311 AraC-like ligand binding domain 32 93 5.7E-5 T 01-11-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 D3790_04210 915f14dbb94ce5f4301ed4e284fa4361 259 Gene3D G3DSA:1.10.10.60 160 259 7.0E-23 T 01-11-2018 D3790_04210 915f14dbb94ce5f4301ed4e284fa4361 259 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 210 253 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 D3790_04210 915f14dbb94ce5f4301ed4e284fa4361 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 226 241 1.2E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D3790_04210 915f14dbb94ce5f4301ed4e284fa4361 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 257 1.2E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D3790_04210 915f14dbb94ce5f4301ed4e284fa4361 259 SUPERFAMILY SSF51182 20 191 2.13E-12 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily D3790_04210 915f14dbb94ce5f4301ed4e284fa4361 259 SMART SM00342 175 257 3.5E-23 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D3790_04210 915f14dbb94ce5f4301ed4e284fa4361 259 Pfam PF12833 Helix-turn-helix domain 181 258 3.7E-22 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D3790_04210 915f14dbb94ce5f4301ed4e284fa4361 259 SUPERFAMILY SSF46689 211 258 4.93E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_04210 915f14dbb94ce5f4301ed4e284fa4361 259 Gene3D G3DSA:2.60.120.10 2 96 2.2E-9 T 01-11-2018 IPR014710 RmlC-like jelly roll fold D3790_17160 a66ae62700b948067a64eef162e79d28 416 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 260 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_17160 a66ae62700b948067a64eef162e79d28 416 PIRSF PIRSF000521 13 113 1.2E-5 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_17160 a66ae62700b948067a64eef162e79d28 416 PIRSF PIRSF000521 106 405 1.5E-45 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_17160 a66ae62700b948067a64eef162e79d28 416 Pfam PF00202 Aminotransferase class-III 23 398 2.9E-82 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_17160 a66ae62700b948067a64eef162e79d28 416 SUPERFAMILY SSF53383 23 403 1.57E-93 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_17160 a66ae62700b948067a64eef162e79d28 416 Gene3D G3DSA:3.40.640.10 44 306 2.3E-96 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_17160 a66ae62700b948067a64eef162e79d28 416 Gene3D G3DSA:3.90.1150.10 18 395 2.3E-96 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_05470 4cac46ce2f948d8d64707c56b963c241 183 PIRSF PIRSF028103 5 180 5.9E-56 T 01-11-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 D3790_05470 4cac46ce2f948d8d64707c56b963c241 183 SUPERFAMILY SSF55021 92 177 5.73E-13 T 01-11-2018 D3790_05470 4cac46ce2f948d8d64707c56b963c241 183 Gene3D G3DSA:3.30.70.260 4 86 3.1E-24 T 01-11-2018 D3790_05470 4cac46ce2f948d8d64707c56b963c241 183 Pfam PF13740 ACT domain 7 82 1.3E-24 T 01-11-2018 D3790_05470 4cac46ce2f948d8d64707c56b963c241 183 Gene3D G3DSA:3.30.70.260 91 182 4.5E-21 T 01-11-2018 D3790_05470 4cac46ce2f948d8d64707c56b963c241 183 SUPERFAMILY SSF55021 6 84 1.11E-15 T 01-11-2018 D3790_16400 433a96b0ae47e5d56f161d0d74dd01e6 107 Pfam PF00581 Rhodanese-like domain 18 98 1.8E-12 T 01-11-2018 IPR001763 Rhodanese-like domain D3790_16400 433a96b0ae47e5d56f161d0d74dd01e6 107 SMART SM00450 7 102 1.6E-17 T 01-11-2018 IPR001763 Rhodanese-like domain D3790_16400 433a96b0ae47e5d56f161d0d74dd01e6 107 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 31.707 T 01-11-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 D3790_16400 433a96b0ae47e5d56f161d0d74dd01e6 107 Gene3D G3DSA:3.40.250.10 1 106 5.0E-26 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily D3790_16400 433a96b0ae47e5d56f161d0d74dd01e6 107 SUPERFAMILY SSF52821 1 104 4.98E-27 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily D3790_08855 9ab4b29dcaafc6c52b35243aebb12335 567 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 01-11-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site D3790_08855 9ab4b29dcaafc6c52b35243aebb12335 567 Pfam PF02203 Tar ligand binding domain homologue 1 176 1.9E-43 T 01-11-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 D3790_08855 9ab4b29dcaafc6c52b35243aebb12335 567 Gene3D G3DSA:1.20.120.30 22 193 1.7E-43 T 01-11-2018 D3790_08855 9ab4b29dcaafc6c52b35243aebb12335 567 SMART SM00283 269 516 4.4E-93 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D3790_08855 9ab4b29dcaafc6c52b35243aebb12335 567 SUPERFAMILY SSF47170 25 181 5.1E-39 T 01-11-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily D3790_08855 9ab4b29dcaafc6c52b35243aebb12335 567 SMART SM00319 44 182 1.3E-22 T 01-11-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 D3790_08855 9ab4b29dcaafc6c52b35243aebb12335 567 SUPERFAMILY SSF58104 236 517 1.44E-74 T 01-11-2018 D3790_08855 9ab4b29dcaafc6c52b35243aebb12335 567 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 484 5.6E-58 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D3790_08855 9ab4b29dcaafc6c52b35243aebb12335 567 Gene3D G3DSA:1.10.287.950 216 518 2.9E-95 T 01-11-2018 D3790_08855 9ab4b29dcaafc6c52b35243aebb12335 567 SMART SM00304 216 268 2.8E-8 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D3790_08855 9ab4b29dcaafc6c52b35243aebb12335 567 Pfam PF00672 HAMP domain 218 263 5.8E-7 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D3790_08855 9ab4b29dcaafc6c52b35243aebb12335 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 8.8E-83 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D3790_08855 9ab4b29dcaafc6c52b35243aebb12335 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 8.8E-83 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D3790_08855 9ab4b29dcaafc6c52b35243aebb12335 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 8.8E-83 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D3790_08855 9ab4b29dcaafc6c52b35243aebb12335 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 8.8E-83 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D3790_08855 9ab4b29dcaafc6c52b35243aebb12335 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 8.8E-83 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D3790_08855 9ab4b29dcaafc6c52b35243aebb12335 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 8.8E-83 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D3790_08855 9ab4b29dcaafc6c52b35243aebb12335 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 8.8E-83 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D3790_08335 7d9a03c015b6ad53132ffb92cfbfe7f5 381 SUPERFAMILY SSF53383 4 378 3.26E-109 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_08335 7d9a03c015b6ad53132ffb92cfbfe7f5 381 PIRSF PIRSF000390 1 381 1.2E-108 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase D3790_08335 7d9a03c015b6ad53132ffb92cfbfe7f5 381 Gene3D G3DSA:3.40.640.10 1 252 2.8E-91 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_08335 7d9a03c015b6ad53132ffb92cfbfe7f5 381 Gene3D G3DSA:3.90.1150.10 253 381 2.5E-35 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_08335 7d9a03c015b6ad53132ffb92cfbfe7f5 381 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 379 69.468 T 01-11-2018 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87 D3790_08335 7d9a03c015b6ad53132ffb92cfbfe7f5 381 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 373 2.9E-123 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase D3790_02235 cc5849a3ff7bb96d8737e69a12069619 323 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 261 303 1.0E-15 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 D3790_02235 cc5849a3ff7bb96d8737e69a12069619 323 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 64 159 4.9E-25 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 D3790_02235 cc5849a3ff7bb96d8737e69a12069619 323 Pfam PF10502 Signal peptidase, peptidase S26 261 301 9.2E-6 T 01-11-2018 IPR019533 Peptidase S26 D3790_02235 cc5849a3ff7bb96d8737e69a12069619 323 Gene3D G3DSA:2.10.109.10 80 303 7.2E-63 T 01-11-2018 D3790_02235 cc5849a3ff7bb96d8737e69a12069619 323 Pfam PF00717 Peptidase S24-like 86 158 3.5E-21 T 01-11-2018 IPR015927 Peptidase S24/S26A/S26B/S26C D3790_02235 cc5849a3ff7bb96d8737e69a12069619 323 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 1.0E-25 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 D3790_02235 cc5849a3ff7bb96d8737e69a12069619 323 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 263 282 1.0E-25 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 D3790_02235 cc5849a3ff7bb96d8737e69a12069619 323 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 1.0E-25 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 D3790_02235 cc5849a3ff7bb96d8737e69a12069619 323 SUPERFAMILY SSF51306 78 322 1.15E-69 T 01-11-2018 IPR036286 LexA/Signal peptidase-like superfamily D3790_02235 cc5849a3ff7bb96d8737e69a12069619 323 ProSitePatterns PS00761 Signal peptidases I signature 3. 268 281 - T 01-11-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 D3790_02235 cc5849a3ff7bb96d8737e69a12069619 323 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 01-11-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 D3790_02235 cc5849a3ff7bb96d8737e69a12069619 323 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 01-11-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 D3790_02235 cc5849a3ff7bb96d8737e69a12069619 323 Gene3D G3DSA:2.170.230.10 155 262 7.2E-63 T 01-11-2018 D3790_08835 6f0efe7939da8138004cfbe263f66b3e 129 SMART SM00448 6 120 5.2E-35 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_08835 6f0efe7939da8138004cfbe263f66b3e 129 Pfam PF00072 Response regulator receiver domain 9 120 2.7E-32 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_08835 6f0efe7939da8138004cfbe263f66b3e 129 Gene3D G3DSA:3.40.50.2300 1 127 1.8E-38 T 01-11-2018 D3790_08835 6f0efe7939da8138004cfbe263f66b3e 129 SUPERFAMILY SSF52172 5 125 2.99E-36 T 01-11-2018 IPR011006 CheY-like superfamily D3790_19000 7892fab7a43c0532a18038201baf3667 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 8.0E-13 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D3790_19000 7892fab7a43c0532a18038201baf3667 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 8.0E-13 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D3790_19000 7892fab7a43c0532a18038201baf3667 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 8.0E-13 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D3790_19000 7892fab7a43c0532a18038201baf3667 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 8.0E-13 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D3790_19000 7892fab7a43c0532a18038201baf3667 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 8.0E-13 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D3790_19000 7892fab7a43c0532a18038201baf3667 233 Gene3D G3DSA:2.40.30.10 2 98 7.4E-25 T 01-11-2018 D3790_19000 7892fab7a43c0532a18038201baf3667 233 SUPERFAMILY SSF63380 3 97 3.23E-21 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel D3790_19000 7892fab7a43c0532a18038201baf3667 233 Gene3D G3DSA:3.40.50.80 99 233 5.7E-26 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3790_19000 7892fab7a43c0532a18038201baf3667 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 96 3.3E-5 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 D3790_19000 7892fab7a43c0532a18038201baf3667 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 2.0E-20 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 D3790_19000 7892fab7a43c0532a18038201baf3667 233 SUPERFAMILY SSF52343 100 231 5.24E-33 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3790_06690 c549454fc1aa5c0668bd878417cb7007 210 Gene3D G3DSA:2.60.120.1460 12 205 1.1E-6 T 01-11-2018 D3790_06690 c549454fc1aa5c0668bd878417cb7007 210 Pfam PF15977 Winged helix-turn-helix DNA binding 141 206 7.0E-27 T 01-11-2018 D3790_02775 658526e416b262037806359cefb8fa7a 391 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 23 390 2.0E-154 T 01-11-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 D3790_02775 658526e416b262037806359cefb8fa7a 391 ProSitePatterns PS00480 Citrate synthase signature. 273 285 - T 01-11-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 D3790_02775 658526e416b262037806359cefb8fa7a 391 PIRSF PIRSF001369 17 391 1.6E-107 T 01-11-2018 IPR024176 Citrate synthase, bacterial-type D3790_02775 658526e416b262037806359cefb8fa7a 391 Gene3D G3DSA:1.10.230.10 239 337 3.5E-124 T 01-11-2018 IPR016143 Citrate synthase-like, small alpha subdomain D3790_02775 658526e416b262037806359cefb8fa7a 391 Pfam PF00285 Citrate synthase, C-terminal domain 24 373 7.4E-111 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 D3790_02775 658526e416b262037806359cefb8fa7a 391 PRINTS PR00143 Citrate synthase signature 191 206 2.8E-37 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 D3790_02775 658526e416b262037806359cefb8fa7a 391 PRINTS PR00143 Citrate synthase signature 343 357 2.8E-37 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 D3790_02775 658526e416b262037806359cefb8fa7a 391 PRINTS PR00143 Citrate synthase signature 323 339 2.8E-37 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 D3790_02775 658526e416b262037806359cefb8fa7a 391 PRINTS PR00143 Citrate synthase signature 213 241 2.8E-37 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 D3790_02775 658526e416b262037806359cefb8fa7a 391 PRINTS PR00143 Citrate synthase signature 266 286 2.8E-37 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 D3790_02775 658526e416b262037806359cefb8fa7a 391 PRINTS PR00143 Citrate synthase signature 141 154 2.8E-37 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 D3790_02775 658526e416b262037806359cefb8fa7a 391 Gene3D G3DSA:1.10.580.10 44 370 3.5E-124 T 01-11-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 D3790_02775 658526e416b262037806359cefb8fa7a 391 SUPERFAMILY SSF48256 23 390 8.64E-120 T 01-11-2018 IPR036969 Citrate synthase superfamily GO:0046912 D3790_08715 2c7407b99fd9587a9d1d52559fb5bf46 92 Pfam PF00708 Acylphosphatase 7 90 2.3E-25 T 01-11-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 D3790_08715 2c7407b99fd9587a9d1d52559fb5bf46 92 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 01-11-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 D3790_08715 2c7407b99fd9587a9d1d52559fb5bf46 92 Gene3D G3DSA:3.30.70.100 1 91 3.5E-28 T 01-11-2018 D3790_08715 2c7407b99fd9587a9d1d52559fb5bf46 92 PRINTS PR00112 Acylphosphatase signature 26 51 6.4E-7 T 01-11-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 D3790_08715 2c7407b99fd9587a9d1d52559fb5bf46 92 PRINTS PR00112 Acylphosphatase signature 5 20 6.4E-7 T 01-11-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 D3790_08715 2c7407b99fd9587a9d1d52559fb5bf46 92 PRINTS PR00112 Acylphosphatase signature 61 81 6.4E-7 T 01-11-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 D3790_08715 2c7407b99fd9587a9d1d52559fb5bf46 92 Hamap MF_01450 Acylphosphatase [yccX]. 2 91 29.38 T 01-11-2018 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 D3790_08715 2c7407b99fd9587a9d1d52559fb5bf46 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 01-11-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 D3790_08715 2c7407b99fd9587a9d1d52559fb5bf46 92 SUPERFAMILY SSF54975 3 91 2.18E-29 T 01-11-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 D3790_03595 67b30f7e76fbb21e20b2f0e5b3184e9c 231 Gene3D G3DSA:3.40.50.2300 2 130 8.8E-33 T 01-11-2018 D3790_03595 67b30f7e76fbb21e20b2f0e5b3184e9c 231 SMART SM00448 7 117 3.6E-35 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_03595 67b30f7e76fbb21e20b2f0e5b3184e9c 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 5.4E-20 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D3790_03595 67b30f7e76fbb21e20b2f0e5b3184e9c 231 Pfam PF00072 Response regulator receiver domain 9 118 5.3E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_03595 67b30f7e76fbb21e20b2f0e5b3184e9c 231 SUPERFAMILY SSF52172 5 181 1.28E-36 T 01-11-2018 IPR011006 CheY-like superfamily D3790_03595 67b30f7e76fbb21e20b2f0e5b3184e9c 231 Gene3D G3DSA:1.10.10.10 131 231 6.5E-28 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_03595 67b30f7e76fbb21e20b2f0e5b3184e9c 231 SMART SM00862 152 228 9.3E-20 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D3790_02975 65d16632f1cab5c9155d7b842918621d 414 SUPERFAMILY SSF56176 325 410 1.74E-23 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 D3790_02975 65d16632f1cab5c9155d7b842918621d 414 SMART SM01091 327 405 6.8E-27 T 01-11-2018 IPR005170 Transporter-associated domain D3790_02975 65d16632f1cab5c9155d7b842918621d 414 Gene3D G3DSA:3.10.580.10 186 315 2.0E-40 T 01-11-2018 D3790_02975 65d16632f1cab5c9155d7b842918621d 414 SUPERFAMILY SSF54631 177 314 1.39E-21 T 01-11-2018 D3790_02975 65d16632f1cab5c9155d7b842918621d 414 Pfam PF01595 Domain of unknown function DUF21 2 169 1.4E-47 T 01-11-2018 IPR002550 CNNM, transmembrane domain D3790_02975 65d16632f1cab5c9155d7b842918621d 414 Gene3D G3DSA:3.30.465.10 325 404 1.8E-27 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 D3790_02975 65d16632f1cab5c9155d7b842918621d 414 Pfam PF03471 Transporter associated domain 329 404 5.5E-20 T 01-11-2018 IPR005170 Transporter-associated domain D3790_03920 ca280e82dcd92846cd364631c8e71a4f 578 Pfam PF00005 ABC transporter 348 491 1.2E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_03920 ca280e82dcd92846cd364631c8e71a4f 578 Pfam PF00005 ABC transporter 27 167 8.0E-29 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_03920 ca280e82dcd92846cd364631c8e71a4f 578 SMART SM00382 356 546 7.6E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_03920 ca280e82dcd92846cd364631c8e71a4f 578 SMART SM00382 34 247 4.4E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_03920 ca280e82dcd92846cd364631c8e71a4f 578 SUPERFAMILY SSF52540 21 229 3.7E-54 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_03920 ca280e82dcd92846cd364631c8e71a4f 578 Gene3D G3DSA:3.40.50.300 1 235 8.5E-58 T 01-11-2018 D3790_03920 ca280e82dcd92846cd364631c8e71a4f 578 Gene3D G3DSA:3.40.50.300 325 557 6.5E-62 T 01-11-2018 D3790_03920 ca280e82dcd92846cd364631c8e71a4f 578 SUPERFAMILY SSF52540 324 549 1.41E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_03920 ca280e82dcd92846cd364631c8e71a4f 578 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_01985 d52a102435c0ed22e25800d4ad8c7eb5 191 SMART SM00857 5 142 6.6E-50 T 01-11-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 D3790_01985 d52a102435c0ed22e25800d4ad8c7eb5 191 SUPERFAMILY SSF46689 144 187 6.81E-6 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_01985 d52a102435c0ed22e25800d4ad8c7eb5 191 ProSitePatterns PS00398 Site-specific recombinases signature 2. 61 73 - T 01-11-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 D3790_01985 d52a102435c0ed22e25800d4ad8c7eb5 191 Pfam PF00239 Resolvase, N terminal domain 6 141 1.1E-41 T 01-11-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 D3790_01985 d52a102435c0ed22e25800d4ad8c7eb5 191 Pfam PF02796 Helix-turn-helix domain of resolvase 144 187 9.5E-10 T 01-11-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 D3790_01985 d52a102435c0ed22e25800d4ad8c7eb5 191 SUPERFAMILY SSF53041 5 141 3.01E-40 T 01-11-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 D3790_01985 d52a102435c0ed22e25800d4ad8c7eb5 191 Gene3D G3DSA:3.40.50.1390 5 143 3.4E-37 T 01-11-2018 D3790_13360 8e823dc55d7eaaf5dc20168223adc742 152 Pfam PF17384 RimP C-terminal SH3 domain 87 152 2.1E-23 T 01-11-2018 IPR028998 Ribosome maturation factor RimP, C-terminal D3790_13360 8e823dc55d7eaaf5dc20168223adc742 152 Pfam PF02576 RimP N-terminal domain 14 84 3.9E-26 T 01-11-2018 IPR028989 Ribosome maturation factor RimP, N-terminal D3790_13360 8e823dc55d7eaaf5dc20168223adc742 152 SUPERFAMILY SSF74942 85 152 3.27E-18 T 01-11-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily D3790_13360 8e823dc55d7eaaf5dc20168223adc742 152 Gene3D G3DSA:3.30.300.70 2 81 4.5E-23 T 01-11-2018 IPR035956 RimP, N-terminal domain superfamily D3790_13360 8e823dc55d7eaaf5dc20168223adc742 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 8 152 24.119 T 01-11-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 D3790_13360 8e823dc55d7eaaf5dc20168223adc742 152 SUPERFAMILY SSF75420 4 84 5.62E-22 T 01-11-2018 IPR035956 RimP, N-terminal domain superfamily D3790_09760 36724c6c9c327fdea904fb718a0650c8 336 Gene3D G3DSA:3.20.20.70 2 336 2.1E-143 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_09760 36724c6c9c327fdea904fb718a0650c8 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 01-11-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 D3790_09760 36724c6c9c327fdea904fb718a0650c8 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 2.8E-91 T 01-11-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 D3790_09760 36724c6c9c327fdea904fb718a0650c8 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 01-11-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 D3790_09760 36724c6c9c327fdea904fb718a0650c8 336 PIRSF PIRSF000164 11 336 2.5E-97 T 01-11-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 D3790_09760 36724c6c9c327fdea904fb718a0650c8 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 8.0E-157 T 01-11-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 D3790_09760 36724c6c9c327fdea904fb718a0650c8 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.148 T 01-11-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 D3790_09760 36724c6c9c327fdea904fb718a0650c8 336 SUPERFAMILY SSF51395 1 334 2.93E-105 T 01-11-2018 D3790_08135 38bd24d3bff66c564f729407d9fa2771 219 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 6.1E-105 T 01-11-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 D3790_08135 38bd24d3bff66c564f729407d9fa2771 219 Hamap MF_00157 Ribonuclease T [rnt]. 1 219 114.448 T 01-11-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 D3790_08135 38bd24d3bff66c564f729407d9fa2771 219 SUPERFAMILY SSF53098 9 207 2.42E-57 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_08135 38bd24d3bff66c564f729407d9fa2771 219 SMART SM00479 18 203 3.2E-34 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D3790_08135 38bd24d3bff66c564f729407d9fa2771 219 Pfam PF00929 Exonuclease 20 194 3.2E-35 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D3790_08135 38bd24d3bff66c564f729407d9fa2771 219 Gene3D G3DSA:3.30.420.10 10 215 2.1E-56 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_05980 35a5cbc3d3f20484b12bdbd981544096 465 SUPERFAMILY SSF49373 127 202 2.15E-5 T 01-11-2018 IPR008964 Invasin/intimin cell-adhesion fragments D3790_03580 28a8d843abf4c17ea48a307caf56afeb 213 Pfam PF01966 HD domain 26 129 7.9E-9 T 01-11-2018 IPR006674 HD domain D3790_03580 28a8d843abf4c17ea48a307caf56afeb 213 SMART SM00471 20 139 1.0E-6 T 01-11-2018 IPR003607 HD/PDEase domain D3790_03580 28a8d843abf4c17ea48a307caf56afeb 213 SUPERFAMILY SSF109604 2 211 1.04E-51 T 01-11-2018 D3790_03580 28a8d843abf4c17ea48a307caf56afeb 213 Gene3D G3DSA:1.10.3210.50 1 213 3.8E-63 T 01-11-2018 D3790_03140 a2d6eb40f1e74d5ab90d906f1e3c5369 432 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 4 340 4.5E-127 T 01-11-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase D3790_03140 a2d6eb40f1e74d5ab90d906f1e3c5369 432 SUPERFAMILY SSF51905 3 270 2.33E-18 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_03140 a2d6eb40f1e74d5ab90d906f1e3c5369 432 Gene3D G3DSA:3.50.50.60 1 421 8.4E-116 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_04335 74a1d6b6628b6b66eacd3d7094dbc32b 98 Pfam PF04175 Protein of unknown function (DUF406) 8 98 2.2E-38 T 01-11-2018 IPR005272 Conserved hypothetical protein CHP00743 D3790_04335 74a1d6b6628b6b66eacd3d7094dbc32b 98 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 4 98 1.8E-37 T 01-11-2018 IPR005272 Conserved hypothetical protein CHP00743 D3790_04335 74a1d6b6628b6b66eacd3d7094dbc32b 98 Gene3D G3DSA:3.30.70.860 27 98 4.1E-24 T 01-11-2018 IPR035571 UPF0234-like, C-terminal D3790_16565 57967ca0ba994a11fc134c8fb7029423 91 Pfam PF01192 RNA polymerase Rpb6 10 59 1.6E-15 T 01-11-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 D3790_16565 57967ca0ba994a11fc134c8fb7029423 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.603 T 01-11-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16565 57967ca0ba994a11fc134c8fb7029423 91 SUPERFAMILY SSF63562 1 78 2.44E-25 T 01-11-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 D3790_16565 57967ca0ba994a11fc134c8fb7029423 91 SMART SM01409 8 61 4.6E-16 T 01-11-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 D3790_16565 57967ca0ba994a11fc134c8fb7029423 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 5.1E-29 T 01-11-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_16565 57967ca0ba994a11fc134c8fb7029423 91 Gene3D G3DSA:3.90.940.10 1 91 7.4E-31 T 01-11-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 D3790_16930 233a645fb1b9cc6ceadfa2155636e83a 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.8E-15 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 D3790_16930 233a645fb1b9cc6ceadfa2155636e83a 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 01-11-2018 IPR018488 Cyclic nucleotide-binding, conserved site D3790_16930 233a645fb1b9cc6ceadfa2155636e83a 210 Gene3D G3DSA:1.10.10.10 139 207 1.3E-35 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_16930 233a645fb1b9cc6ceadfa2155636e83a 210 SUPERFAMILY SSF51206 8 136 2.75E-35 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like D3790_16930 233a645fb1b9cc6ceadfa2155636e83a 210 SMART SM00419 160 208 4.5E-17 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 D3790_16930 233a645fb1b9cc6ceadfa2155636e83a 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 D3790_16930 233a645fb1b9cc6ceadfa2155636e83a 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 D3790_16930 233a645fb1b9cc6ceadfa2155636e83a 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 01-11-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 D3790_16930 233a645fb1b9cc6ceadfa2155636e83a 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 01-11-2018 IPR018488 Cyclic nucleotide-binding, conserved site D3790_16930 233a645fb1b9cc6ceadfa2155636e83a 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 1.1E-23 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain D3790_16930 233a645fb1b9cc6ceadfa2155636e83a 210 Gene3D G3DSA:2.60.120.10 10 138 1.3E-44 T 01-11-2018 IPR014710 RmlC-like jelly roll fold D3790_16930 233a645fb1b9cc6ceadfa2155636e83a 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_16930 233a645fb1b9cc6ceadfa2155636e83a 210 SMART SM00100 2 122 1.0E-26 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain D3790_07915 f721397c50a29d166c6fa9a349398c57 113 Pfam PF03245 Bacteriophage Rz lysis protein 11 113 2.7E-25 T 01-11-2018 IPR004929 Spanin, inner membrane subunit GO:0019076|GO:0019835 D3790_14065 57e1bdfe77280775f00e57f8cf2f4258 185 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 1.7E-7 T 01-11-2018 IPR001451 Hexapeptide repeat D3790_14065 57e1bdfe77280775f00e57f8cf2f4258 185 Gene3D G3DSA:2.160.10.10 1 183 2.8E-55 T 01-11-2018 D3790_14065 57e1bdfe77280775f00e57f8cf2f4258 185 SUPERFAMILY SSF51161 5 175 3.6E-44 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily D3790_05185 9f2d7eb41f166bf2c4f2e460ca82031f 116 Gene3D G3DSA:3.30.428.10 1 111 8.1E-35 T 01-11-2018 IPR036265 HIT-like superfamily D3790_05185 9f2d7eb41f166bf2c4f2e460ca82031f 116 PRINTS PR00332 Histidine triad family signature 27 45 2.3E-19 T 01-11-2018 IPR001310 Histidine triad (HIT) protein D3790_05185 9f2d7eb41f166bf2c4f2e460ca82031f 116 PRINTS PR00332 Histidine triad family signature 6 22 2.3E-19 T 01-11-2018 IPR001310 Histidine triad (HIT) protein D3790_05185 9f2d7eb41f166bf2c4f2e460ca82031f 116 PRINTS PR00332 Histidine triad family signature 95 105 2.3E-19 T 01-11-2018 IPR001310 Histidine triad (HIT) protein D3790_05185 9f2d7eb41f166bf2c4f2e460ca82031f 116 Pfam PF01230 HIT domain 12 109 2.6E-29 T 01-11-2018 IPR001310 Histidine triad (HIT) protein D3790_05185 9f2d7eb41f166bf2c4f2e460ca82031f 116 SUPERFAMILY SSF54197 2 113 4.02E-35 T 01-11-2018 IPR036265 HIT-like superfamily D3790_05185 9f2d7eb41f166bf2c4f2e460ca82031f 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 01-11-2018 IPR019808 Histidine triad, conserved site D3790_04180 134714b394826b925fdc934d87d4bc2c 432 Pfam PF08245 Mur ligase middle domain 55 195 4.5E-11 T 01-11-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 D3790_04180 134714b394826b925fdc934d87d4bc2c 432 SUPERFAMILY SSF53244 294 424 6.04E-30 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D3790_04180 134714b394826b925fdc934d87d4bc2c 432 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 145 160 - T 01-11-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 D3790_04180 134714b394826b925fdc934d87d4bc2c 432 Gene3D G3DSA:3.40.1190.10 2 295 1.0E-93 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D3790_04180 134714b394826b925fdc934d87d4bc2c 432 PIRSF PIRSF001563 7 430 2.5E-106 T 01-11-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 D3790_04180 134714b394826b925fdc934d87d4bc2c 432 Gene3D G3DSA:3.90.190.20 296 432 2.4E-32 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D3790_04180 134714b394826b925fdc934d87d4bc2c 432 SUPERFAMILY SSF53623 14 293 1.33E-83 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D3790_04180 134714b394826b925fdc934d87d4bc2c 432 TIGRFAM TIGR01499 folC: bifunctional protein FolC 33 423 2.4E-103 T 01-11-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 D3790_09005 d73c56a84eb0a888ee0985487ee9ca95 181 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 12 168 1.6E-29 T 01-11-2018 IPR013046 Phage baseplate assembly protein V/Gp45 D3790_09005 d73c56a84eb0a888ee0985487ee9ca95 181 PIRSF PIRSF012337 1 181 3.5E-54 T 01-11-2018 IPR014462 Phage-associated protein Gp45 D3790_09005 d73c56a84eb0a888ee0985487ee9ca95 181 Gene3D G3DSA:2.20.25.540 87 140 3.3E-21 T 01-11-2018 D3790_09005 d73c56a84eb0a888ee0985487ee9ca95 181 Pfam PF06890 Bacteriophage Mu Gp45 protein 20 173 1.5E-52 T 01-11-2018 IPR014462 Phage-associated protein Gp45 D3790_07045 21ac66ba92380d3284c4f000d92141e1 314 Pfam PF00582 Universal stress protein family 177 301 1.1E-9 T 01-11-2018 IPR006016 UspA D3790_07045 21ac66ba92380d3284c4f000d92141e1 314 Pfam PF00582 Universal stress protein family 4 146 3.1E-17 T 01-11-2018 IPR006016 UspA D3790_07045 21ac66ba92380d3284c4f000d92141e1 314 Gene3D G3DSA:3.40.50.12370 1 314 2.2E-122 T 01-11-2018 D3790_07045 21ac66ba92380d3284c4f000d92141e1 314 SUPERFAMILY SSF52402 4 153 2.43E-28 T 01-11-2018 D3790_07045 21ac66ba92380d3284c4f000d92141e1 314 SUPERFAMILY SSF52402 155 308 9.21E-21 T 01-11-2018 D3790_16220 89d60e064e907184661c739b60ca33d4 159 SUPERFAMILY SSF141452 2 158 3.66E-34 T 01-11-2018 IPR036624 Hcp1-like superfamily D3790_16220 89d60e064e907184661c739b60ca33d4 159 Pfam PF05638 Type VI secretion system effector, Hcp 18 143 1.3E-21 T 01-11-2018 IPR008514 Type VI secretion system effector, Hcp D3790_16220 89d60e064e907184661c739b60ca33d4 159 Gene3D G3DSA:2.30.110.20 2 159 7.0E-52 T 01-11-2018 IPR036624 Hcp1-like superfamily D3790_16220 89d60e064e907184661c739b60ca33d4 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 156 1.5E-61 T 01-11-2018 IPR008514 Type VI secretion system effector, Hcp D3790_13835 6a87548ff0dbbeadbca87f4a235c110d 401 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 28 360 1.5E-112 T 01-11-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX D3790_19710 a7e4950fc0f3746ffea7ef66c4db94fb 538 TIGRFAM TIGR02547 casA_cse1: CRISPR type I-E/ECOLI-associated protein CasA/Cse1 2 507 3.2E-128 T 01-11-2018 IPR013381 CRISPR-associated protein Cse1 D3790_19710 a7e4950fc0f3746ffea7ef66c4db94fb 538 Pfam PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) 2 478 8.2E-103 T 01-11-2018 IPR013381 CRISPR-associated protein Cse1 D3790_08540 f2da4fd8220a0ecbaf4aba13946ab600 266 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 266 1.9E-122 T 01-11-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 D3790_08540 f2da4fd8220a0ecbaf4aba13946ab600 266 Pfam PF03609 PTS system sorbose-specific iic component 5 237 1.2E-75 T 01-11-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 D3790_10195 9bf4bb1a97ec425b56556c342154c2fd 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 01-11-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 D3790_10195 9bf4bb1a97ec425b56556c342154c2fd 294 Gene3D G3DSA:3.40.140.10 180 293 2.4E-29 T 01-11-2018 D3790_10195 9bf4bb1a97ec425b56556c342154c2fd 294 PIRSF PIRSF006334 14 294 6.4E-108 T 01-11-2018 D3790_10195 9bf4bb1a97ec425b56556c342154c2fd 294 SUPERFAMILY SSF53927 1 144 6.69E-43 T 01-11-2018 IPR016193 Cytidine deaminase-like GO:0003824 D3790_10195 9bf4bb1a97ec425b56556c342154c2fd 294 SUPERFAMILY SSF53927 155 288 1.25E-37 T 01-11-2018 IPR016193 Cytidine deaminase-like GO:0003824 D3790_10195 9bf4bb1a97ec425b56556c342154c2fd 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 1.3E-46 T 01-11-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 D3790_10195 9bf4bb1a97ec425b56556c342154c2fd 294 Gene3D G3DSA:3.40.140.10 29 179 1.1E-42 T 01-11-2018 D3790_10195 9bf4bb1a97ec425b56556c342154c2fd 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 48.775 T 01-11-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 D3790_10195 9bf4bb1a97ec425b56556c342154c2fd 294 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 285 4.3E-90 T 01-11-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 D3790_10195 9bf4bb1a97ec425b56556c342154c2fd 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 61 140 1.4E-11 T 01-11-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain D3790_09630 11bba5ec0b5f3bcdb0d746adafcba96f 286 SUPERFAMILY SSF55729 119 250 6.14E-5 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_19005 6f1148971305223dfb1d24a88d5d5fd1 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 3.5E-216 T 01-11-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 D3790_19005 6f1148971305223dfb1d24a88d5d5fd1 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 1.9E-82 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 D3790_19005 6f1148971305223dfb1d24a88d5d5fd1 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 01-11-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 D3790_19005 6f1148971305223dfb1d24a88d5d5fd1 387 Gene3D G3DSA:3.40.47.10 134 381 6.2E-153 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_19005 6f1148971305223dfb1d24a88d5d5fd1 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 01-11-2018 IPR020610 Thiolase, active site GO:0016747 D3790_19005 6f1148971305223dfb1d24a88d5d5fd1 387 SUPERFAMILY SSF53901 262 386 3.35E-44 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_19005 6f1148971305223dfb1d24a88d5d5fd1 387 Gene3D G3DSA:3.40.47.10 4 267 6.2E-153 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_19005 6f1148971305223dfb1d24a88d5d5fd1 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 59.46 T 01-11-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 D3790_19005 6f1148971305223dfb1d24a88d5d5fd1 387 SUPERFAMILY SSF53901 1 259 1.61E-77 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_19005 6f1148971305223dfb1d24a88d5d5fd1 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 D3790_19005 6f1148971305223dfb1d24a88d5d5fd1 387 PIRSF PIRSF000429 1 387 1.9E-132 T 01-11-2018 IPR002155 Thiolase GO:0016747 D3790_19005 6f1148971305223dfb1d24a88d5d5fd1 387 Pfam PF02803 Thiolase, C-terminal domain 261 386 6.4E-49 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 D3790_19005 6f1148971305223dfb1d24a88d5d5fd1 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 2.9E-143 T 01-11-2018 IPR002155 Thiolase GO:0016747 D3790_14670 187df9cca96932d0b68dea79c85aa326 346 SUPERFAMILY SSF53098 207 311 8.85E-7 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_14670 187df9cca96932d0b68dea79c85aa326 346 SUPERFAMILY SSF46689 27 140 9.32E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_14670 187df9cca96932d0b68dea79c85aa326 346 Pfam PF13551 Winged helix-turn helix 30 79 2.3E-9 T 01-11-2018 D3790_14670 187df9cca96932d0b68dea79c85aa326 346 Gene3D G3DSA:3.30.420.470 145 340 3.6E-12 T 01-11-2018 D3790_14670 187df9cca96932d0b68dea79c85aa326 346 Pfam PF13358 DDE superfamily endonuclease 177 310 1.7E-26 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_14445 0d8b1424c59a2cb76cd9bed30df72ad5 385 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 11 377 7.9E-150 T 01-11-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 D3790_14445 0d8b1424c59a2cb76cd9bed30df72ad5 385 Gene3D G3DSA:3.40.630.10 13 365 1.2E-84 T 01-11-2018 D3790_14445 0d8b1424c59a2cb76cd9bed30df72ad5 385 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 01-11-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 D3790_14445 0d8b1424c59a2cb76cd9bed30df72ad5 385 Gene3D G3DSA:3.30.70.360 181 303 1.2E-84 T 01-11-2018 D3790_14445 0d8b1424c59a2cb76cd9bed30df72ad5 385 SUPERFAMILY SSF55031 181 293 1.42E-21 T 01-11-2018 IPR036264 Bacterial exopeptidase dimerisation domain D3790_14445 0d8b1424c59a2cb76cd9bed30df72ad5 385 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 110 147 - T 01-11-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 D3790_14445 0d8b1424c59a2cb76cd9bed30df72ad5 385 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 382 65.051 T 01-11-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 D3790_14445 0d8b1424c59a2cb76cd9bed30df72ad5 385 SUPERFAMILY SSF53187 2 381 9.84E-60 T 01-11-2018 D3790_14445 0d8b1424c59a2cb76cd9bed30df72ad5 385 Pfam PF07687 Peptidase dimerisation domain 178 288 1.6E-24 T 01-11-2018 IPR011650 Peptidase M20, dimerisation domain D3790_14445 0d8b1424c59a2cb76cd9bed30df72ad5 385 Pfam PF01546 Peptidase family M20/M25/M40 76 378 3.2E-34 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 D3790_19360 3c74b81efa6cb893d16da2817d6e5740 91 Gene3D G3DSA:1.10.260.40 4 68 6.1E-19 T 01-11-2018 D3790_19360 3c74b81efa6cb893d16da2817d6e5740 91 SMART SM00530 10 65 5.1E-16 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_19360 3c74b81efa6cb893d16da2817d6e5740 91 Pfam PF01381 Helix-turn-helix 12 65 6.5E-16 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_19360 3c74b81efa6cb893d16da2817d6e5740 91 SUPERFAMILY SSF47413 2 73 1.38E-20 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_05550 26ee7b4e7c1bd19fe9f87c3c67ed23aa 681 Gene3D G3DSA:3.40.50.1820 18 667 1.7E-244 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_05550 26ee7b4e7c1bd19fe9f87c3c67ed23aa 681 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 501 531 - T 01-11-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 D3790_05550 26ee7b4e7c1bd19fe9f87c3c67ed23aa 681 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 466 490 2.2E-50 T 01-11-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D3790_05550 26ee7b4e7c1bd19fe9f87c3c67ed23aa 681 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 524 544 2.2E-50 T 01-11-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D3790_05550 26ee7b4e7c1bd19fe9f87c3c67ed23aa 681 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 494 513 2.2E-50 T 01-11-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D3790_05550 26ee7b4e7c1bd19fe9f87c3c67ed23aa 681 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 600 622 2.2E-50 T 01-11-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D3790_05550 26ee7b4e7c1bd19fe9f87c3c67ed23aa 681 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 440 458 2.2E-50 T 01-11-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D3790_05550 26ee7b4e7c1bd19fe9f87c3c67ed23aa 681 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 582 597 2.2E-50 T 01-11-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D3790_05550 26ee7b4e7c1bd19fe9f87c3c67ed23aa 681 Pfam PF00326 Prolyl oligopeptidase family 455 667 5.7E-65 T 01-11-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 D3790_05550 26ee7b4e7c1bd19fe9f87c3c67ed23aa 681 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 4 398 1.9E-89 T 01-11-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 D3790_05550 26ee7b4e7c1bd19fe9f87c3c67ed23aa 681 SUPERFAMILY SSF53474 408 657 1.5E-44 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_05550 26ee7b4e7c1bd19fe9f87c3c67ed23aa 681 Gene3D G3DSA:2.130.10.120 69 399 1.7E-244 T 01-11-2018 D3790_05550 26ee7b4e7c1bd19fe9f87c3c67ed23aa 681 SUPERFAMILY SSF50993 3 402 1.15E-81 T 01-11-2018 D3790_08960 e88dabf066250bb5cff9be136fecabbf 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 1.0E-32 T 01-11-2018 IPR025730 Biofilm regulator BssS D3790_08960 e88dabf066250bb5cff9be136fecabbf 84 Pfam PF13991 BssS protein family 11 82 7.6E-38 T 01-11-2018 IPR025730 Biofilm regulator BssS D3790_16970 bf7fd59d6aba65a6c94db04ec42ba1ab 329 SUPERFAMILY SSF56112 7 325 1.11E-82 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily D3790_16970 bf7fd59d6aba65a6c94db04ec42ba1ab 329 Pfam PF01636 Phosphotransferase enzyme family 33 254 6.4E-35 T 01-11-2018 IPR002575 Aminoglycoside phosphotransferase D3790_16970 bf7fd59d6aba65a6c94db04ec42ba1ab 329 Gene3D G3DSA:1.10.510.10 61 259 2.9E-117 T 01-11-2018 D3790_16970 bf7fd59d6aba65a6c94db04ec42ba1ab 329 Hamap MF_01497 Stress response kinase A [srkA]. 5 319 44.488 T 01-11-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 D3790_16970 bf7fd59d6aba65a6c94db04ec42ba1ab 329 Gene3D G3DSA:3.30.200.70 14 109 2.9E-117 T 01-11-2018 D3790_16970 bf7fd59d6aba65a6c94db04ec42ba1ab 329 Gene3D G3DSA:1.20.1270.170 150 308 2.9E-117 T 01-11-2018 D3790_12620 8db8789b5f10ca2bb6f5b7c9115415ab 429 Gene3D G3DSA:3.40.50.1100 103 401 2.2E-137 T 01-11-2018 D3790_12620 8db8789b5f10ca2bb6f5b7c9115415ab 429 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 01-11-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 D3790_12620 8db8789b5f10ca2bb6f5b7c9115415ab 429 Gene3D G3DSA:3.40.50.1100 85 394 2.2E-137 T 01-11-2018 D3790_12620 8db8789b5f10ca2bb6f5b7c9115415ab 429 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 99 370 1.2E-21 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D3790_12620 8db8789b5f10ca2bb6f5b7c9115415ab 429 Pfam PF14821 Threonine synthase N terminus 8 80 2.3E-14 T 01-11-2018 IPR029144 Threonine synthase, N-terminal D3790_12620 8db8789b5f10ca2bb6f5b7c9115415ab 429 SUPERFAMILY SSF53686 1 427 4.45E-132 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D3790_12620 8db8789b5f10ca2bb6f5b7c9115415ab 429 TIGRFAM TIGR00260 thrC: threonine synthase 52 398 9.0E-119 T 01-11-2018 IPR004450 Threonine synthase-like D3790_12620 8db8789b5f10ca2bb6f5b7c9115415ab 429 Gene3D G3DSA:3.90.1380.10 1 81 8.1E-36 T 01-11-2018 IPR037158 Threonine synthase, N-terminal domain superfamily D3790_13775 565bfa3919745a1e5a97f289721cf96f 75 SUPERFAMILY SSF89447 3 66 2.25E-10 T 01-11-2018 IPR037914 SpoVT-AbrB domain superfamily D3790_13775 565bfa3919745a1e5a97f289721cf96f 75 Gene3D G3DSA:2.10.260.10 1 73 1.3E-16 T 01-11-2018 D3790_13775 565bfa3919745a1e5a97f289721cf96f 75 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 50 3.9E-10 T 01-11-2018 IPR007159 SpoVT-AbrB domain GO:0003677 D3790_13775 565bfa3919745a1e5a97f289721cf96f 75 SMART SM00966 7 48 2.9E-5 T 01-11-2018 IPR007159 SpoVT-AbrB domain GO:0003677 D3790_10775 d2ef64000641e99d2fec56cd73e38da9 301 Gene3D G3DSA:3.40.190.290 90 294 2.1E-62 T 01-11-2018 D3790_10775 d2ef64000641e99d2fec56cd73e38da9 301 Gene3D G3DSA:1.10.10.10 2 83 2.0E-25 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_10775 d2ef64000641e99d2fec56cd73e38da9 301 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 2.2E-109 T 01-11-2018 IPR017685 HTH-type transcriptional regulator ArgP D3790_10775 d2ef64000641e99d2fec56cd73e38da9 301 SUPERFAMILY SSF53850 92 289 5.61E-18 T 01-11-2018 D3790_10775 d2ef64000641e99d2fec56cd73e38da9 301 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 55.165 T 01-11-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria D3790_10775 d2ef64000641e99d2fec56cd73e38da9 301 SUPERFAMILY SSF46785 4 111 9.24E-17 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_10775 d2ef64000641e99d2fec56cd73e38da9 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 5.3E-19 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_10775 d2ef64000641e99d2fec56cd73e38da9 301 Pfam PF03466 LysR substrate binding domain 93 287 2.6E-11 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_10775 d2ef64000641e99d2fec56cd73e38da9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.2E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_10775 d2ef64000641e99d2fec56cd73e38da9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.2E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_10775 d2ef64000641e99d2fec56cd73e38da9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.2E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_03570 28f9e017d3b0553c81c5491b5d37b4ed 546 Gene3D G3DSA:3.40.120.10 319 442 3.9E-35 T 01-11-2018 D3790_03570 28f9e017d3b0553c81c5491b5d37b4ed 546 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 439 3.6E-27 T 01-11-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_03570 28f9e017d3b0553c81c5491b5d37b4ed 546 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 178 4.5E-37 T 01-11-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_03570 28f9e017d3b0553c81c5491b5d37b4ed 546 Gene3D G3DSA:3.40.120.10 12 218 4.1E-76 T 01-11-2018 D3790_03570 28f9e017d3b0553c81c5491b5d37b4ed 546 Gene3D G3DSA:3.40.120.10 221 318 1.2E-44 T 01-11-2018 D3790_03570 28f9e017d3b0553c81c5491b5d37b4ed 546 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 2 543 1.4E-300 T 01-11-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 D3790_03570 28f9e017d3b0553c81c5491b5d37b4ed 546 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 01-11-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_03570 28f9e017d3b0553c81c5491b5d37b4ed 546 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 8.4E-17 T 01-11-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_03570 28f9e017d3b0553c81c5491b5d37b4ed 546 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 484 537 1.7E-6 T 01-11-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_03570 28f9e017d3b0553c81c5491b5d37b4ed 546 SUPERFAMILY SSF55957 432 543 2.35E-18 T 01-11-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_03570 28f9e017d3b0553c81c5491b5d37b4ed 546 SUPERFAMILY SSF53738 209 317 7.65E-8 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_03570 28f9e017d3b0553c81c5491b5d37b4ed 546 Gene3D G3DSA:3.30.310.50 443 545 3.4E-34 T 01-11-2018 D3790_03570 28f9e017d3b0553c81c5491b5d37b4ed 546 SUPERFAMILY SSF53738 25 235 3.3E-53 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_03570 28f9e017d3b0553c81c5491b5d37b4ed 546 SUPERFAMILY SSF53738 305 447 1.29E-31 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D3790_10510 f9c2c8548dd460ef5198e1f298de1c14 241 Gene3D G3DSA:3.30.950.10 111 241 6.2E-53 T 01-11-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 D3790_10510 f9c2c8548dd460ef5198e1f298de1c14 241 Gene3D G3DSA:3.40.1010.10 1 110 3.5E-31 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 D3790_10510 f9c2c8548dd460ef5198e1f298de1c14 241 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 2 240 1.3E-102 T 01-11-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 D3790_10510 f9c2c8548dd460ef5198e1f298de1c14 241 SUPERFAMILY SSF53790 1 239 7.85E-56 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 D3790_10510 f9c2c8548dd460ef5198e1f298de1c14 241 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 206 1.7E-39 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 D3790_04465 629b8a2d710ecd448074412bd00ab52e 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 01-11-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 D3790_04465 629b8a2d710ecd448074412bd00ab52e 169 Gene3D G3DSA:2.70.70.10 9 169 5.7E-62 T 01-11-2018 IPR011055 Duplicated hybrid motif D3790_04465 629b8a2d710ecd448074412bd00ab52e 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 2.4E-49 T 01-11-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 D3790_04465 629b8a2d710ecd448074412bd00ab52e 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 1.9E-50 T 01-11-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 D3790_04465 629b8a2d710ecd448074412bd00ab52e 169 SUPERFAMILY SSF51261 12 167 2.62E-56 T 01-11-2018 IPR011055 Duplicated hybrid motif D3790_03240 9379a548ce498d8ae7d1619928579cc0 108 SUPERFAMILY SSF81301 7 108 5.07E-36 T 01-11-2018 D3790_03240 9379a548ce498d8ae7d1619928579cc0 108 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 10 107 1.2E-36 T 01-11-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS D3790_03240 9379a548ce498d8ae7d1619928579cc0 108 Gene3D G3DSA:3.30.460.10 5 108 1.2E-35 T 01-11-2018 D3790_03240 9379a548ce498d8ae7d1619928579cc0 108 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 6 108 23.919 T 01-11-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS D3790_03240 9379a548ce498d8ae7d1619928579cc0 108 Pfam PF02410 Ribosomal silencing factor during starvation 13 107 6.1E-28 T 01-11-2018 D3790_17975 d0efce7819366fcd04bff5151f3de3f0 346 Pfam PF00107 Zinc-binding dehydrogenase 177 291 3.1E-21 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 D3790_17975 d0efce7819366fcd04bff5151f3de3f0 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 01-11-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 D3790_17975 d0efce7819366fcd04bff5151f3de3f0 346 Gene3D G3DSA:3.90.180.10 15 330 3.7E-98 T 01-11-2018 D3790_17975 d0efce7819366fcd04bff5151f3de3f0 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 128 1.0E-28 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 D3790_17975 d0efce7819366fcd04bff5151f3de3f0 346 SUPERFAMILY SSF51735 139 308 5.55E-36 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_17975 d0efce7819366fcd04bff5151f3de3f0 346 SUPERFAMILY SSF50129 1 155 2.83E-55 T 01-11-2018 IPR011032 GroES-like superfamily D3790_17975 d0efce7819366fcd04bff5151f3de3f0 346 Gene3D G3DSA:3.40.50.720 154 289 3.7E-98 T 01-11-2018 D3790_18795 10d66a7e5fe747cd5ebff328714586d9 398 Pfam PF00155 Aminotransferase class I and II 27 393 1.2E-84 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D3790_18795 10d66a7e5fe747cd5ebff328714586d9 398 PRINTS PR00799 Aspartate aminotransferase signature 274 299 2.8E-36 T 01-11-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 D3790_18795 10d66a7e5fe747cd5ebff328714586d9 398 PRINTS PR00799 Aspartate aminotransferase signature 342 360 2.8E-36 T 01-11-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 D3790_18795 10d66a7e5fe747cd5ebff328714586d9 398 PRINTS PR00799 Aspartate aminotransferase signature 176 195 2.8E-36 T 01-11-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 D3790_18795 10d66a7e5fe747cd5ebff328714586d9 398 PRINTS PR00799 Aspartate aminotransferase signature 207 219 2.8E-36 T 01-11-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 D3790_18795 10d66a7e5fe747cd5ebff328714586d9 398 Gene3D G3DSA:3.40.640.10 60 301 2.0E-156 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_18795 10d66a7e5fe747cd5ebff328714586d9 398 Gene3D G3DSA:3.90.1150.10 11 392 2.0E-156 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_18795 10d66a7e5fe747cd5ebff328714586d9 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 01-11-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 D3790_18795 10d66a7e5fe747cd5ebff328714586d9 398 SUPERFAMILY SSF53383 1 395 1.62E-119 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_11675 dc8f3906e1177c1156f0ef7676a7c9a6 76 Gene3D G3DSA:3.20.20.100 1 75 1.6E-23 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily D3790_11675 dc8f3906e1177c1156f0ef7676a7c9a6 76 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 29 44 - T 01-11-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 D3790_11675 dc8f3906e1177c1156f0ef7676a7c9a6 76 SUPERFAMILY SSF51430 3 67 1.28E-18 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily D3790_11675 dc8f3906e1177c1156f0ef7676a7c9a6 76 Pfam PF00248 Aldo/keto reductase family 3 60 7.2E-9 T 01-11-2018 IPR023210 NADP-dependent oxidoreductase domain D3790_03930 5e2387ce3acc12d04dcfb2d41c2467a8 225 SUPERFAMILY SSF46689 7 85 4.26E-19 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_03930 5e2387ce3acc12d04dcfb2d41c2467a8 225 Gene3D G3DSA:1.10.10.60 3 64 5.7E-24 T 01-11-2018 D3790_03930 5e2387ce3acc12d04dcfb2d41c2467a8 225 Gene3D G3DSA:1.10.357.10 65 225 6.0E-50 T 01-11-2018 D3790_03930 5e2387ce3acc12d04dcfb2d41c2467a8 225 Pfam PF09209 Domain of unknown function (DUF1956) 97 222 3.5E-28 T 01-11-2018 IPR015292 Transcription regulator YbiH, C-terminal D3790_03930 5e2387ce3acc12d04dcfb2d41c2467a8 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 5.7E-12 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D3790_03930 5e2387ce3acc12d04dcfb2d41c2467a8 225 SUPERFAMILY SSF48498 92 223 5.56E-29 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D3790_03930 5e2387ce3acc12d04dcfb2d41c2467a8 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 9.2E-6 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D3790_03930 5e2387ce3acc12d04dcfb2d41c2467a8 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 9.2E-6 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D3790_11785 0f1d762c60d33f2f59b0a5e9b316b681 433 Hamap MF_00318 Enolase [eno]. 2 417 44.15 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D3790_11785 0f1d762c60d33f2f59b0a5e9b316b681 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 01-11-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_11785 0f1d762c60d33f2f59b0a5e9b316b681 433 SMART SM01192 143 431 3.1E-212 T 01-11-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D3790_11785 0f1d762c60d33f2f59b0a5e9b316b681 433 Gene3D G3DSA:3.20.20.120 128 433 8.9E-134 T 01-11-2018 IPR036849 Enolase-like, C-terminal domain superfamily D3790_11785 0f1d762c60d33f2f59b0a5e9b316b681 433 SMART SM01193 4 134 2.8E-91 T 01-11-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D3790_11785 0f1d762c60d33f2f59b0a5e9b316b681 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 1.2E-138 T 01-11-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D3790_11785 0f1d762c60d33f2f59b0a5e9b316b681 433 SUPERFAMILY SSF54826 3 138 3.14E-56 T 01-11-2018 D3790_11785 0f1d762c60d33f2f59b0a5e9b316b681 433 SUPERFAMILY SSF51604 143 428 1.98E-126 T 01-11-2018 IPR036849 Enolase-like, C-terminal domain superfamily D3790_11785 0f1d762c60d33f2f59b0a5e9b316b681 433 Pfam PF03952 Enolase, N-terminal domain 4 134 8.0E-58 T 01-11-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D3790_11785 0f1d762c60d33f2f59b0a5e9b316b681 433 PRINTS PR00148 Enolase signature 369 386 3.2E-44 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D3790_11785 0f1d762c60d33f2f59b0a5e9b316b681 433 PRINTS PR00148 Enolase signature 317 328 3.2E-44 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D3790_11785 0f1d762c60d33f2f59b0a5e9b316b681 433 PRINTS PR00148 Enolase signature 340 354 3.2E-44 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D3790_11785 0f1d762c60d33f2f59b0a5e9b316b681 433 PRINTS PR00148 Enolase signature 37 51 3.2E-44 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D3790_11785 0f1d762c60d33f2f59b0a5e9b316b681 433 PRINTS PR00148 Enolase signature 165 178 3.2E-44 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D3790_11785 0f1d762c60d33f2f59b0a5e9b316b681 433 PRINTS PR00148 Enolase signature 107 123 3.2E-44 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D3790_11785 0f1d762c60d33f2f59b0a5e9b316b681 433 Gene3D G3DSA:3.30.390.10 1 127 2.6E-54 T 01-11-2018 IPR029017 Enolase-like, N-terminal D3790_11785 0f1d762c60d33f2f59b0a5e9b316b681 433 PIRSF PIRSF001400 1 431 2.7E-192 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D3790_11785 0f1d762c60d33f2f59b0a5e9b316b681 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 3.8E-208 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D3790_03105 51b150ec07262ca326139506d4b103a7 742 SUPERFAMILY SSF56935 34 742 2.87E-124 T 01-11-2018 D3790_03105 51b150ec07262ca326139506d4b103a7 742 Pfam PF00593 TonB dependent receptor 273 741 2.4E-49 T 01-11-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D3790_03105 51b150ec07262ca326139506d4b103a7 742 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 81 742 9.6E-106 T 01-11-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 D3790_03105 51b150ec07262ca326139506d4b103a7 742 Gene3D G3DSA:2.170.130.10 56 188 2.0E-33 T 01-11-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D3790_03105 51b150ec07262ca326139506d4b103a7 742 Gene3D G3DSA:2.40.170.20 189 742 1.8E-156 T 01-11-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3790_03105 51b150ec07262ca326139506d4b103a7 742 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 725 742 - T 01-11-2018 IPR010917 TonB-dependent receptor, conserved site D3790_03105 51b150ec07262ca326139506d4b103a7 742 Pfam PF07715 TonB-dependent Receptor Plug Domain 79 179 1.6E-11 T 01-11-2018 IPR012910 TonB-dependent receptor, plug domain D3790_04205 aa9068ce444f2e9248c9e1dfa9280d6e 375 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 1.3E-27 T 01-11-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 D3790_04205 aa9068ce444f2e9248c9e1dfa9280d6e 375 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 47.029 T 01-11-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 D3790_04205 aa9068ce444f2e9248c9e1dfa9280d6e 375 SUPERFAMILY SSF51735 91 257 1.42E-33 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_04205 aa9068ce444f2e9248c9e1dfa9280d6e 375 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 01-11-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 D3790_04205 aa9068ce444f2e9248c9e1dfa9280d6e 375 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 256 4.0E-33 T 01-11-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 D3790_04205 aa9068ce444f2e9248c9e1dfa9280d6e 375 Gene3D G3DSA:3.40.50.720 92 257 1.3E-114 T 01-11-2018 D3790_04205 aa9068ce444f2e9248c9e1dfa9280d6e 375 Gene3D G3DSA:3.40.50.720 3 277 1.3E-114 T 01-11-2018 D3790_04205 aa9068ce444f2e9248c9e1dfa9280d6e 375 Gene3D G3DSA:3.30.1370.170 293 374 3.6E-30 T 01-11-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 D3790_04205 aa9068ce444f2e9248c9e1dfa9280d6e 375 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 285 8.5E-17 T 01-11-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 D3790_04205 aa9068ce444f2e9248c9e1dfa9280d6e 375 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 01-11-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site D3790_04205 aa9068ce444f2e9248c9e1dfa9280d6e 375 SUPERFAMILY SSF52283 8 109 1.36E-18 T 01-11-2018 D3790_05675 aa6facf569e1cc247b9b92795dd6dcd9 87 SUPERFAMILY SSF47413 2 71 1.52E-30 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_05675 aa6facf569e1cc247b9b92795dd6dcd9 87 Gene3D G3DSA:1.10.260.40 1 71 3.3E-33 T 01-11-2018 D3790_05675 aa6facf569e1cc247b9b92795dd6dcd9 87 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 80 1.3E-37 T 01-11-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain D3790_06245 d50a9d63ffa78de683673f1ec792bc9c 333 Gene3D G3DSA:3.40.50.300 8 332 3.9E-98 T 01-11-2018 D3790_06245 d50a9d63ffa78de683673f1ec792bc9c 333 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_06245 d50a9d63ffa78de683673f1ec792bc9c 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 328 6.3E-29 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 D3790_06245 d50a9d63ffa78de683673f1ec792bc9c 333 Pfam PF00005 ABC transporter 40 191 3.3E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_06245 d50a9d63ffa78de683673f1ec792bc9c 333 SUPERFAMILY SSF52540 22 263 6.69E-74 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_06245 d50a9d63ffa78de683673f1ec792bc9c 333 SMART SM00382 48 241 2.2E-17 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_06245 d50a9d63ffa78de683673f1ec792bc9c 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 310 2.4E-19 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 D3790_17510 3330eb371e88066facaf9e104501247d 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 8.1E-16 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D3790_17510 3330eb371e88066facaf9e104501247d 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D3790_17510 3330eb371e88066facaf9e104501247d 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 6.5E-60 T 01-11-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 D3790_17510 3330eb371e88066facaf9e104501247d 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 474 3.7E-154 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D3790_17510 3330eb371e88066facaf9e104501247d 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D3790_17510 3330eb371e88066facaf9e104501247d 477 Pfam PF04552 Sigma-54, DNA binding domain 318 475 2.6E-69 T 01-11-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding D3790_17510 3330eb371e88066facaf9e104501247d 477 PRINTS PR00045 Sigma-54 factor signature 450 468 4.1E-32 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D3790_17510 3330eb371e88066facaf9e104501247d 477 PRINTS PR00045 Sigma-54 factor signature 186 203 4.1E-32 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D3790_17510 3330eb371e88066facaf9e104501247d 477 PRINTS PR00045 Sigma-54 factor signature 376 388 4.1E-32 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D3790_17510 3330eb371e88066facaf9e104501247d 477 PRINTS PR00045 Sigma-54 factor signature 392 403 4.1E-32 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D3790_17510 3330eb371e88066facaf9e104501247d 477 Gene3D G3DSA:1.10.10.60 417 474 4.4E-23 T 01-11-2018 D3790_17510 3330eb371e88066facaf9e104501247d 477 PIRSF PIRSF000774 1 477 5.4E-152 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D3790_17510 3330eb371e88066facaf9e104501247d 477 Gene3D G3DSA:1.10.10.1330 116 251 1.2E-24 T 01-11-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily D3790_18445 1832c63bd816766bad48d32033fa7f1d 165 SUPERFAMILY SSF111384 22 164 2.48E-38 T 01-11-2018 D3790_18445 1832c63bd816766bad48d32033fa7f1d 165 Pfam PF03938 Outer membrane protein (OmpH-like) 11 163 5.5E-35 T 01-11-2018 IPR005632 Chaperone protein Skp GO:0051082 D3790_18445 1832c63bd816766bad48d32033fa7f1d 165 Gene3D G3DSA:3.30.910.20 21 165 1.2E-45 T 01-11-2018 IPR024930 Skp domain superfamily D3790_18445 1832c63bd816766bad48d32033fa7f1d 165 SMART SM00935 12 165 1.1E-54 T 01-11-2018 IPR005632 Chaperone protein Skp GO:0051082 D3790_18445 1832c63bd816766bad48d32033fa7f1d 165 PIRSF PIRSF002094 1 165 2.9E-56 T 01-11-2018 IPR005632 Chaperone protein Skp GO:0051082 D3790_18765 20973ff050e3bb42e9373514dcc70c98 253 SUPERFAMILY SSF116734 7 233 2.13E-40 T 01-11-2018 D3790_18765 20973ff050e3bb42e9373514dcc70c98 253 Gene3D G3DSA:3.90.220.20 26 177 5.3E-35 T 01-11-2018 D3790_18765 20973ff050e3bb42e9373514dcc70c98 253 Gene3D G3DSA:1.10.287.1120 9 224 5.3E-35 T 01-11-2018 D3790_18765 20973ff050e3bb42e9373514dcc70c98 253 Pfam PF01420 Type I restriction modification DNA specificity domain 23 207 5.1E-9 T 01-11-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 D3790_18335 5bc64e556708fbb2ebfa1ee9e8173aef 183 Gene3D G3DSA:3.40.1580.20 1 181 1.6E-62 T 01-11-2018 IPR038228 Syd superfamily D3790_18335 5bc64e556708fbb2ebfa1ee9e8173aef 183 Pfam PF07348 Syd protein (SUKH-2) 7 179 3.4E-68 T 01-11-2018 IPR009948 Syd GO:0009898 D3790_18335 5bc64e556708fbb2ebfa1ee9e8173aef 183 Hamap MF_01104 Protein Syd [syd]. 3 181 34.045 T 01-11-2018 IPR009948 Syd GO:0009898 D3790_09715 32e366d60ab824a08a3e986d1f93a3c0 172 Gene3D G3DSA:3.10.129.10 2 172 8.4E-62 T 01-11-2018 D3790_09715 32e366d60ab824a08a3e986d1f93a3c0 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 1.7E-91 T 01-11-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D3790_09715 32e366d60ab824a08a3e986d1f93a3c0 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 49.801 T 01-11-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D3790_09715 32e366d60ab824a08a3e986d1f93a3c0 172 Pfam PF07977 FabA-like domain 29 158 8.0E-53 T 01-11-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D3790_09715 32e366d60ab824a08a3e986d1f93a3c0 172 SUPERFAMILY SSF54637 4 169 2.09E-54 T 01-11-2018 IPR029069 HotDog domain superfamily D3790_15785 3a24e0058479f431b79cdeb131de7d2b 811 Gene3D G3DSA:3.40.605.10 104 221 3.3E-7 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D3790_15785 3a24e0058479f431b79cdeb131de7d2b 811 Pfam PF00501 AMP-binding enzyme 470 672 5.0E-8 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_15785 3a24e0058479f431b79cdeb131de7d2b 811 Pfam PF05893 Acyl-CoA reductase (LuxC) 40 420 4.6E-110 T 01-11-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 D3790_15785 3a24e0058479f431b79cdeb131de7d2b 811 Gene3D G3DSA:3.40.309.10 222 294 3.3E-7 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D3790_15785 3a24e0058479f431b79cdeb131de7d2b 811 SUPERFAMILY SSF56801 444 731 6.67E-20 T 01-11-2018 D3790_15785 3a24e0058479f431b79cdeb131de7d2b 811 SUPERFAMILY SSF53720 63 285 8.64E-16 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D3790_15785 3a24e0058479f431b79cdeb131de7d2b 811 Gene3D G3DSA:3.40.50.12780 433 712 8.6E-50 T 01-11-2018 D3790_11875 999da0741cac7d57201582ab3b6bd3ec 163 PIRSF PIRSF006162 4 161 5.6E-53 T 01-11-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 D3790_11875 999da0741cac7d57201582ab3b6bd3ec 163 SUPERFAMILY SSF101307 8 156 1.12E-47 T 01-11-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 D3790_11875 999da0741cac7d57201582ab3b6bd3ec 163 Pfam PF04608 Phosphatidylglycerophosphatase A 15 155 3.7E-51 T 01-11-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 D3790_02610 8b8b6dd9b7246d773d17a40664dba1ac 905 Gene3D G3DSA:3.90.980.10 114 236 7.2E-11 T 01-11-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily D3790_02610 8b8b6dd9b7246d773d17a40664dba1ac 905 Pfam PF13155 Toprim-like 253 340 6.9E-15 T 01-11-2018 D3790_02610 8b8b6dd9b7246d773d17a40664dba1ac 905 Pfam PF08275 DNA primase catalytic core, N-terminal domain 125 222 4.1E-6 T 01-11-2018 IPR013264 DNA primase, catalytic core, N-terminal D3790_02610 8b8b6dd9b7246d773d17a40664dba1ac 905 SUPERFAMILY SSF56731 118 360 4.58E-34 T 01-11-2018 D3790_02610 8b8b6dd9b7246d773d17a40664dba1ac 905 Gene3D G3DSA:3.40.1360.10 239 356 3.7E-17 T 01-11-2018 D3790_02610 8b8b6dd9b7246d773d17a40664dba1ac 905 SUPERFAMILY SSF57783 1 96 3.91E-28 T 01-11-2018 D3790_02610 8b8b6dd9b7246d773d17a40664dba1ac 905 Pfam PF01807 CHC2 zinc finger 6 92 3.2E-23 T 01-11-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 D3790_02610 8b8b6dd9b7246d773d17a40664dba1ac 905 Gene3D G3DSA:3.90.580.10 1 98 1.3E-28 T 01-11-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 D3790_02610 8b8b6dd9b7246d773d17a40664dba1ac 905 SMART SM00400 36 90 1.8E-21 T 01-11-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 D3790_16940 6cb10ed8de52451169ddcd3b87489dc8 191 SUPERFAMILY SSF52317 1 190 1.21E-52 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_16940 6cb10ed8de52451169ddcd3b87489dc8 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 190 3.6E-90 T 01-11-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D3790_16940 6cb10ed8de52451169ddcd3b87489dc8 191 Pfam PF00117 Glutamine amidotransferase class-I 4 189 7.2E-54 T 01-11-2018 IPR017926 Glutamine amidotransferase D3790_16940 6cb10ed8de52451169ddcd3b87489dc8 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 2.0E-5 T 01-11-2018 D3790_16940 6cb10ed8de52451169ddcd3b87489dc8 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 2.0E-5 T 01-11-2018 D3790_16940 6cb10ed8de52451169ddcd3b87489dc8 191 Gene3D G3DSA:3.40.50.880 1 191 7.5E-59 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_16940 6cb10ed8de52451169ddcd3b87489dc8 191 PRINTS PR00097 Anthranilate synthase component II signature 168 181 5.0E-36 T 01-11-2018 D3790_16940 6cb10ed8de52451169ddcd3b87489dc8 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 5.0E-36 T 01-11-2018 D3790_16940 6cb10ed8de52451169ddcd3b87489dc8 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 5.0E-36 T 01-11-2018 D3790_16940 6cb10ed8de52451169ddcd3b87489dc8 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 5.0E-36 T 01-11-2018 D3790_16940 6cb10ed8de52451169ddcd3b87489dc8 191 PRINTS PR00097 Anthranilate synthase component II signature 119 131 5.0E-36 T 01-11-2018 D3790_16940 6cb10ed8de52451169ddcd3b87489dc8 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 5.0E-36 T 01-11-2018 D3790_16940 6cb10ed8de52451169ddcd3b87489dc8 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.2E-14 T 01-11-2018 D3790_16940 6cb10ed8de52451169ddcd3b87489dc8 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 7.2E-14 T 01-11-2018 D3790_16940 6cb10ed8de52451169ddcd3b87489dc8 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.2E-14 T 01-11-2018 D3790_05740 cb79a0bb8ac7d7ae9b5c1fe267737c1b 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 389 542 1.2E-44 T 01-11-2018 IPR001162 UvrC family homology region D3790_05740 cb79a0bb8ac7d7ae9b5c1fe267737c1b 610 SUPERFAMILY SSF82771 17 100 2.35E-24 T 01-11-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 D3790_05740 cb79a0bb8ac7d7ae9b5c1fe267737c1b 610 Pfam PF14520 Helix-hairpin-helix domain 557 609 1.2E-6 T 01-11-2018 D3790_05740 cb79a0bb8ac7d7ae9b5c1fe267737c1b 610 Pfam PF02151 UvrB/uvrC motif 204 238 1.6E-9 T 01-11-2018 IPR001943 UVR domain GO:0005515 D3790_05740 cb79a0bb8ac7d7ae9b5c1fe267737c1b 610 SUPERFAMILY SSF46600 190 243 7.45E-14 T 01-11-2018 IPR036876 UVR domain superfamily D3790_05740 cb79a0bb8ac7d7ae9b5c1fe267737c1b 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 5.3E-12 T 01-11-2018 IPR000305 GIY-YIG endonuclease D3790_05740 cb79a0bb8ac7d7ae9b5c1fe267737c1b 610 Gene3D G3DSA:1.10.150.20 555 610 1.4E-24 T 01-11-2018 D3790_05740 cb79a0bb8ac7d7ae9b5c1fe267737c1b 610 SUPERFAMILY SSF47781 521 609 1.43E-18 T 01-11-2018 IPR010994 RuvA domain 2-like D3790_05740 cb79a0bb8ac7d7ae9b5c1fe267737c1b 610 SMART SM00278 556 575 0.18 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D3790_05740 cb79a0bb8ac7d7ae9b5c1fe267737c1b 610 SMART SM00278 588 607 61.0 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D3790_05740 cb79a0bb8ac7d7ae9b5c1fe267737c1b 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 589 8.0E-227 T 01-11-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 D3790_05740 cb79a0bb8ac7d7ae9b5c1fe267737c1b 610 SMART SM00465 17 98 2.2E-23 T 01-11-2018 IPR000305 GIY-YIG endonuclease D3790_05740 cb79a0bb8ac7d7ae9b5c1fe267737c1b 610 Gene3D G3DSA:3.40.1440.10 4 102 8.9E-32 T 01-11-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 D3790_05740 cb79a0bb8ac7d7ae9b5c1fe267737c1b 610 Gene3D G3DSA:3.30.420.340 377 552 8.3E-45 T 01-11-2018 IPR038476 UvrC homology region 2 superfamily D3790_05740 cb79a0bb8ac7d7ae9b5c1fe267737c1b 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 29.722 T 01-11-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 D3790_04580 3b7018af880b1db6c648bf069ee42f1f 248 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 20 238 3.1E-88 T 01-11-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 D3790_04580 3b7018af880b1db6c648bf069ee42f1f 248 SUPERFAMILY SSF53335 15 230 7.26E-45 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_04580 3b7018af880b1db6c648bf069ee42f1f 248 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 20 244 36.59 T 01-11-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 D3790_04580 3b7018af880b1db6c648bf069ee42f1f 248 Pfam PF13489 Methyltransferase domain 61 204 1.0E-22 T 01-11-2018 D3790_04580 3b7018af880b1db6c648bf069ee42f1f 248 Gene3D G3DSA:3.40.50.150 20 244 1.0E-74 T 01-11-2018 D3790_03430 0a269d012cca7b9451c0f9bf5890377b 335 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 225 4.3E-9 T 01-11-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 D3790_03430 0a269d012cca7b9451c0f9bf5890377b 335 SUPERFAMILY SSF55347 130 286 7.59E-28 T 01-11-2018 D3790_03430 0a269d012cca7b9451c0f9bf5890377b 335 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 124 4.5E-24 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 D3790_03430 0a269d012cca7b9451c0f9bf5890377b 335 Gene3D G3DSA:3.40.50.720 7 307 1.2E-67 T 01-11-2018 D3790_03430 0a269d012cca7b9451c0f9bf5890377b 335 Gene3D G3DSA:3.30.360.10 129 321 1.2E-67 T 01-11-2018 D3790_03430 0a269d012cca7b9451c0f9bf5890377b 335 SUPERFAMILY SSF51735 2 154 7.7E-48 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_09830 91d5d85a0b2faac6627a319948e842cd 261 Gene3D G3DSA:3.40.50.150 8 260 7.9E-68 T 01-11-2018 D3790_09830 91d5d85a0b2faac6627a319948e842cd 261 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 2 255 41.729 T 01-11-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 D3790_09830 91d5d85a0b2faac6627a319948e842cd 261 SUPERFAMILY SSF53335 4 254 1.51E-36 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_09830 91d5d85a0b2faac6627a319948e842cd 261 Pfam PF13847 Methyltransferase domain 44 147 1.6E-19 T 01-11-2018 IPR025714 Methyltransferase domain D3790_01115 6e7173464e3b0b18ba593407914c3a7e 231 Gene3D G3DSA:3.20.20.10 1 231 1.3E-84 T 01-11-2018 IPR029066 PLP-binding barrel D3790_01115 6e7173464e3b0b18ba593407914c3a7e 231 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 01-11-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 D3790_01115 6e7173464e3b0b18ba593407914c3a7e 231 PIRSF PIRSF004848 1 231 9.4E-78 T 01-11-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 D3790_01115 6e7173464e3b0b18ba593407914c3a7e 231 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 227 2.4E-94 T 01-11-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 D3790_01115 6e7173464e3b0b18ba593407914c3a7e 231 SUPERFAMILY SSF51419 1 225 8.37E-82 T 01-11-2018 IPR029066 PLP-binding barrel D3790_01115 6e7173464e3b0b18ba593407914c3a7e 231 Pfam PF01168 Alanine racemase, N-terminal domain 8 227 4.8E-29 T 01-11-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_01115 6e7173464e3b0b18ba593407914c3a7e 231 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 226 34.18 T 01-11-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 D3790_16780 72aa9a954108fa10852f1a8bdb94de39 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.239 T 01-11-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 D3790_16780 72aa9a954108fa10852f1a8bdb94de39 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.3E-70 T 01-11-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 D3790_16780 72aa9a954108fa10852f1a8bdb94de39 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 01-11-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_16780 72aa9a954108fa10852f1a8bdb94de39 156 SUPERFAMILY SSF47973 6 149 9.94E-60 T 01-11-2018 IPR036823 Ribosomal protein S7 domain superfamily D3790_16780 72aa9a954108fa10852f1a8bdb94de39 156 Gene3D G3DSA:1.10.455.10 2 155 3.5E-64 T 01-11-2018 IPR036823 Ribosomal protein S7 domain superfamily D3790_16780 72aa9a954108fa10852f1a8bdb94de39 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 4.5E-65 T 01-11-2018 IPR023798 Ribosomal protein S7 domain D3790_16780 72aa9a954108fa10852f1a8bdb94de39 156 PIRSF PIRSF002122 3 156 3.0E-62 T 01-11-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 D3790_04835 a0914a294e4e960b849c5f7f3767bd11 609 Pfam PF03600 Citrate transporter 16 196 2.2E-35 T 01-11-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 D3790_04835 a0914a294e4e960b849c5f7f3767bd11 609 Pfam PF03600 Citrate transporter 429 606 3.5E-18 T 01-11-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 D3790_04835 a0914a294e4e960b849c5f7f3767bd11 609 Gene3D G3DSA:3.30.70.1450 228 305 2.5E-13 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D3790_04835 a0914a294e4e960b849c5f7f3767bd11 609 Pfam PF02080 TrkA-C domain 230 303 5.6E-14 T 01-11-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 D3790_04835 a0914a294e4e960b849c5f7f3767bd11 609 Pfam PF02080 TrkA-C domain 325 391 1.1E-9 T 01-11-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 D3790_04835 a0914a294e4e960b849c5f7f3767bd11 609 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 557 573 - T 01-11-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 D3790_04835 a0914a294e4e960b849c5f7f3767bd11 609 SUPERFAMILY SSF116726 230 295 8.11E-10 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D3790_04835 a0914a294e4e960b849c5f7f3767bd11 609 Gene3D G3DSA:3.30.70.1450 323 396 1.1E-14 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D3790_04835 a0914a294e4e960b849c5f7f3767bd11 609 SUPERFAMILY SSF116726 318 392 2.49E-16 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D3790_18045 3dcd2e8c8935080b98a7e63ea337f660 213 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D3790_18045 3dcd2e8c8935080b98a7e63ea337f660 213 Gene3D G3DSA:3.90.79.10 4 209 7.2E-63 T 01-11-2018 D3790_18045 3dcd2e8c8935080b98a7e63ea337f660 213 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 199 5.5E-68 T 01-11-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 D3790_18045 3dcd2e8c8935080b98a7e63ea337f660 213 Pfam PF00293 NUDIX domain 59 179 4.2E-10 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D3790_18045 3dcd2e8c8935080b98a7e63ea337f660 213 SUPERFAMILY SSF55811 8 208 3.11E-46 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D3790_19460 d0e055a508af5859311c1cba29b03c7b 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 68 6.2E-9 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D3790_19460 d0e055a508af5859311c1cba29b03c7b 212 SUPERFAMILY SSF46689 12 82 6.62E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_19460 d0e055a508af5859311c1cba29b03c7b 212 Gene3D G3DSA:1.10.357.10 4 210 6.2E-46 T 01-11-2018 D3790_17230 43af6e9358820f4bec2e208cd382dfba 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 488 6.0E-124 T 01-11-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 D3790_17230 43af6e9358820f4bec2e208cd382dfba 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 4.3E-54 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D3790_17230 43af6e9358820f4bec2e208cd382dfba 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 4.3E-54 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D3790_17230 43af6e9358820f4bec2e208cd382dfba 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 4.3E-54 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D3790_17230 43af6e9358820f4bec2e208cd382dfba 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 4.3E-54 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D3790_17230 43af6e9358820f4bec2e208cd382dfba 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 4.3E-54 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D3790_17230 43af6e9358820f4bec2e208cd382dfba 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 01-11-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 D3790_17230 43af6e9358820f4bec2e208cd382dfba 502 Gene3D G3DSA:3.40.220.10 1 159 6.1E-58 T 01-11-2018 D3790_17230 43af6e9358820f4bec2e208cd382dfba 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.523 T 01-11-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 D3790_17230 43af6e9358820f4bec2e208cd382dfba 502 Gene3D G3DSA:3.40.630.10 181 497 2.9E-139 T 01-11-2018 D3790_17230 43af6e9358820f4bec2e208cd382dfba 502 SUPERFAMILY SSF52949 1 184 1.06E-51 T 01-11-2018 D3790_17230 43af6e9358820f4bec2e208cd382dfba 502 SUPERFAMILY SSF53187 179 495 7.22E-124 T 01-11-2018 D3790_17230 43af6e9358820f4bec2e208cd382dfba 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 1.4E-33 T 01-11-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 D3790_14535 76121944506dddfde0589f9bbe764978 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.409 T 01-11-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 D3790_14535 76121944506dddfde0589f9bbe764978 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 186 329 2.0E-42 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D3790_14535 76121944506dddfde0589f9bbe764978 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 135 4.3E-7 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D3790_14535 76121944506dddfde0589f9bbe764978 443 SUPERFAMILY SSF52540 3 441 9.62E-95 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_14535 76121944506dddfde0589f9bbe764978 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 6.5E-7 T 01-11-2018 IPR019489 Clp ATPase, C-terminal D3790_14535 76121944506dddfde0589f9bbe764978 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 1.8E-230 T 01-11-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 D3790_14535 76121944506dddfde0589f9bbe764978 443 Gene3D G3DSA:1.10.8.60 335 440 8.6E-41 T 01-11-2018 D3790_14535 76121944506dddfde0589f9bbe764978 443 SMART SM00382 49 332 6.6E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_14535 76121944506dddfde0589f9bbe764978 443 SMART SM01086 335 434 5.4E-22 T 01-11-2018 IPR019489 Clp ATPase, C-terminal D3790_14205 fd4842957e35b8a4f9fd92af47da68f3 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 1.5E-58 T 01-11-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 D3790_14205 fd4842957e35b8a4f9fd92af47da68f3 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 01-11-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14205 fd4842957e35b8a4f9fd92af47da68f3 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 8.2E-55 T 01-11-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 D3790_14205 fd4842957e35b8a4f9fd92af47da68f3 123 SMART SM01374 1 123 1.7E-85 T 01-11-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 D3790_14205 fd4842957e35b8a4f9fd92af47da68f3 123 SUPERFAMILY SSF50193 2 122 3.14E-51 T 01-11-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 D3790_14205 fd4842957e35b8a4f9fd92af47da68f3 123 Gene3D G3DSA:2.40.150.20 1 123 7.7E-57 T 01-11-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 D3790_14205 fd4842957e35b8a4f9fd92af47da68f3 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.609 T 01-11-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 D3790_13185 b9e03238d7b4372019206e61d44b25d8 103 Gene3D G3DSA:1.10.8.1250 13 88 1.1E-8 T 01-11-2018 IPR038296 Antitoxin ParD superfamily D3790_13185 b9e03238d7b4372019206e61d44b25d8 103 SUPERFAMILY SSF47598 4 50 2.33E-11 T 01-11-2018 IPR010985 Ribbon-helix-helix GO:0006355 D3790_13185 b9e03238d7b4372019206e61d44b25d8 103 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 5 46 8.6E-6 T 01-11-2018 IPR022789 Antitoxin ParD D3790_11975 fac7e3fed9f231b33f3711ac7ebc74a5 1226 SUPERFAMILY SSF52540 21 1201 1.04E-27 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_11975 fac7e3fed9f231b33f3711ac7ebc74a5 1226 Gene3D G3DSA:3.40.50.300 1 284 1.3E-46 T 01-11-2018 D3790_11975 fac7e3fed9f231b33f3711ac7ebc74a5 1226 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1110 1181 1.5E-14 T 01-11-2018 D3790_11975 fac7e3fed9f231b33f3711ac7ebc74a5 1226 Pfam PF13476 AAA domain 5 246 5.6E-8 T 01-11-2018 IPR038729 Rad50/SbcC-type AAA domain D3790_11975 fac7e3fed9f231b33f3711ac7ebc74a5 1226 Gene3D G3DSA:3.40.50.300 950 1220 5.1E-26 T 01-11-2018 D3790_07115 43c43460bee8859d7986b071942ef5dd 317 SUPERFAMILY SSF159871 4 94 5.23E-21 T 01-11-2018 IPR036275 YdgH-like superfamily D3790_07115 43c43460bee8859d7986b071942ef5dd 317 Pfam PF07338 Protein of unknown function (DUF1471) 120 176 2.7E-16 T 01-11-2018 IPR010854 Domain of unknown function DUF1471 D3790_07115 43c43460bee8859d7986b071942ef5dd 317 Pfam PF07338 Protein of unknown function (DUF1471) 262 317 2.2E-16 T 01-11-2018 IPR010854 Domain of unknown function DUF1471 D3790_07115 43c43460bee8859d7986b071942ef5dd 317 Pfam PF07338 Protein of unknown function (DUF1471) 35 91 5.1E-18 T 01-11-2018 IPR010854 Domain of unknown function DUF1471 D3790_07115 43c43460bee8859d7986b071942ef5dd 317 SUPERFAMILY SSF159871 108 180 7.46E-15 T 01-11-2018 IPR036275 YdgH-like superfamily D3790_07115 43c43460bee8859d7986b071942ef5dd 317 Gene3D G3DSA:3.30.1660.10 107 176 1.2E-19 T 01-11-2018 IPR025543 Dodecin-like D3790_07115 43c43460bee8859d7986b071942ef5dd 317 Gene3D G3DSA:3.30.1660.10 246 317 4.5E-28 T 01-11-2018 IPR025543 Dodecin-like D3790_07115 43c43460bee8859d7986b071942ef5dd 317 Gene3D G3DSA:3.30.1660.10 22 91 1.8E-22 T 01-11-2018 IPR025543 Dodecin-like D3790_07115 43c43460bee8859d7986b071942ef5dd 317 SUPERFAMILY SSF159871 242 317 1.12E-15 T 01-11-2018 IPR036275 YdgH-like superfamily D3790_13805 9e168fe5953bde165890d8ebe02664ef 274 Gene3D G3DSA:3.10.310.10 115 261 2.6E-106 T 01-11-2018 D3790_13805 9e168fe5953bde165890d8ebe02664ef 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 1.3E-100 T 01-11-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 D3790_13805 9e168fe5953bde165890d8ebe02664ef 274 SUPERFAMILY SSF54506 136 272 8.9E-52 T 01-11-2018 D3790_13805 9e168fe5953bde165890d8ebe02664ef 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 01-11-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 D3790_13805 9e168fe5953bde165890d8ebe02664ef 274 SUPERFAMILY SSF54506 1 130 4.12E-48 T 01-11-2018 D3790_13805 9e168fe5953bde165890d8ebe02664ef 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.076 T 01-11-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 D3790_13805 9e168fe5953bde165890d8ebe02664ef 274 Pfam PF01678 Diaminopimelate epimerase 3 122 5.8E-33 T 01-11-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 D3790_13805 9e168fe5953bde165890d8ebe02664ef 274 Pfam PF01678 Diaminopimelate epimerase 152 267 2.0E-31 T 01-11-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 D3790_13805 9e168fe5953bde165890d8ebe02664ef 274 Gene3D G3DSA:3.10.310.10 3 270 2.6E-106 T 01-11-2018 D3790_17450 a7c77304e88c636aeed58b87d93b0185 136 SUPERFAMILY SSF54534 49 127 2.62E-16 T 01-11-2018 D3790_17450 a7c77304e88c636aeed58b87d93b0185 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 41.64 T 01-11-2018 IPR028625 Regulator of nucleoside diphosphate kinase GO:0070063 D3790_17450 a7c77304e88c636aeed58b87d93b0185 136 PIRSF PIRSF006092 21 128 9.2E-23 T 01-11-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 D3790_17450 a7c77304e88c636aeed58b87d93b0185 136 Pfam PF14760 Rnk N-terminus 4 43 1.4E-13 T 01-11-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain D3790_17450 a7c77304e88c636aeed58b87d93b0185 136 Gene3D G3DSA:3.10.50.30 46 136 7.8E-29 T 01-11-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 D3790_17450 a7c77304e88c636aeed58b87d93b0185 136 Gene3D G3DSA:1.10.286.20 1 44 6.9E-26 T 01-11-2018 D3790_17450 a7c77304e88c636aeed58b87d93b0185 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 126 4.7E-17 T 01-11-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 D3790_10770 c70438aa598cc2218a26b4cf8b13970f 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 9.0E-69 T 01-11-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 D3790_10770 c70438aa598cc2218a26b4cf8b13970f 219 SUPERFAMILY SSF75445 127 198 6.54E-23 T 01-11-2018 D3790_10770 c70438aa598cc2218a26b4cf8b13970f 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 1.6E-58 T 01-11-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 D3790_10770 c70438aa598cc2218a26b4cf8b13970f 219 SUPERFAMILY SSF100950 1 146 1.21E-47 T 01-11-2018 IPR037171 NagB/RpiA transferase-like D3790_10770 c70438aa598cc2218a26b4cf8b13970f 219 Gene3D G3DSA:3.30.70.260 125 196 1.7E-75 T 01-11-2018 D3790_10770 c70438aa598cc2218a26b4cf8b13970f 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.764 T 01-11-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 D3790_10770 c70438aa598cc2218a26b4cf8b13970f 219 Gene3D G3DSA:3.40.50.1360 7 207 1.7E-75 T 01-11-2018 D3790_07255 cff10c2bd87a5c55631ccc01ea8dd07b 1030 Gene3D G3DSA:2.180.10.10 4 669 1.4E-229 T 01-11-2018 D3790_07255 cff10c2bd87a5c55631ccc01ea8dd07b 1030 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 589 669 4.1E-27 T 01-11-2018 IPR022385 Rhs repeat-associated core GO:0097264 D3790_18310 9de172d0e3a4da8c24630e83b2f979ed 446 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 16 444 1.6E-100 T 01-11-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 D3790_18310 9de172d0e3a4da8c24630e83b2f979ed 446 Gene3D G3DSA:1.20.1600.10 18 446 2.5E-89 T 01-11-2018 D3790_18310 9de172d0e3a4da8c24630e83b2f979ed 446 Pfam PF02321 Outer membrane efflux protein 246 427 1.1E-28 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D3790_18310 9de172d0e3a4da8c24630e83b2f979ed 446 Pfam PF02321 Outer membrane efflux protein 19 217 2.5E-18 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D3790_18310 9de172d0e3a4da8c24630e83b2f979ed 446 SUPERFAMILY SSF56954 17 444 9.94E-80 T 01-11-2018 D3790_12860 c4775e8e2de1671e556d05ff4ed4b490 117 Gene3D G3DSA:1.20.1300.10 1 117 5.1E-49 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_12860 c4775e8e2de1671e556d05ff4ed4b490 117 SUPERFAMILY SSF81343 1 117 1.9E-50 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_12860 c4775e8e2de1671e556d05ff4ed4b490 117 PIRSF PIRSF000179 1 117 1.6E-50 T 01-11-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 D3790_12860 c4775e8e2de1671e556d05ff4ed4b490 117 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 3 117 2.0E-41 T 01-11-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 D3790_12860 c4775e8e2de1671e556d05ff4ed4b490 117 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 1 117 26.798 T 01-11-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 D3790_12860 c4775e8e2de1671e556d05ff4ed4b490 117 Pfam PF02313 Fumarate reductase subunit D 5 115 8.0E-50 T 01-11-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 D3790_15855 155bf4886e3ddd85e16b20806ab25c49 231 SUPERFAMILY SSF53098 74 190 5.16E-11 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_15855 155bf4886e3ddd85e16b20806ab25c49 231 Pfam PF13610 DDE domain 75 211 7.5E-47 T 01-11-2018 IPR032874 DDE domain D3790_15855 155bf4886e3ddd85e16b20806ab25c49 231 Gene3D G3DSA:3.30.420.10 69 204 5.0E-6 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_11240 f5c2b2b298f553cdfacb41b4ec69c4e5 198 SUPERFAMILY SSF52317 5 191 2.29E-46 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_11240 f5c2b2b298f553cdfacb41b4ec69c4e5 198 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 183 3.4E-65 T 01-11-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 D3790_11240 f5c2b2b298f553cdfacb41b4ec69c4e5 198 Gene3D G3DSA:3.40.50.880 1 196 3.2E-53 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_11240 f5c2b2b298f553cdfacb41b4ec69c4e5 198 Pfam PF01965 DJ-1/PfpI family 4 170 3.5E-41 T 01-11-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 D3790_08155 c6b6486b3428575fd8986c361efc1b85 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.6E-19 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_08155 c6b6486b3428575fd8986c361efc1b85 302 SUPERFAMILY SSF46785 6 88 1.86E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_08155 c6b6486b3428575fd8986c361efc1b85 302 Pfam PF03466 LysR substrate binding domain 88 290 2.2E-24 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_08155 c6b6486b3428575fd8986c361efc1b85 302 Gene3D G3DSA:1.10.10.10 3 89 1.7E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_08155 c6b6486b3428575fd8986c361efc1b85 302 SUPERFAMILY SSF53850 88 290 2.79E-28 T 01-11-2018 D3790_08155 c6b6486b3428575fd8986c361efc1b85 302 Gene3D G3DSA:3.40.190.290 93 279 2.5E-11 T 01-11-2018 D3790_18650 4da9344791a4f256e93a429e2feac942 94 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 26 75 8.0E-13 T 01-11-2018 IPR010260 DNA-binding transcriptional activator AlpA D3790_00820 0d2ea4025d9ef391b1c00136d3c83835 110 Gene3D G3DSA:3.30.500.20 2 110 6.6E-6 T 01-11-2018 D3790_00820 0d2ea4025d9ef391b1c00136d3c83835 110 Pfam PF04634 Protein of unknown function, DUF600 5 110 4.6E-7 T 01-11-2018 IPR006728 Protein of unknown function DUF600 D3790_00820 0d2ea4025d9ef391b1c00136d3c83835 110 SUPERFAMILY SSF160424 5 110 9.42E-17 T 01-11-2018 IPR036170 Probable antitoxin YezG superfamily D3790_01285 a90b113890b1351b3d8915048a353437 515 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 281 287 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D3790_01285 a90b113890b1351b3d8915048a353437 515 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 278 290 4.8E-20 T 01-11-2018 D3790_01285 a90b113890b1351b3d8915048a353437 515 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 312 336 4.8E-20 T 01-11-2018 D3790_01285 a90b113890b1351b3d8915048a353437 515 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 180 196 4.8E-20 T 01-11-2018 D3790_01285 a90b113890b1351b3d8915048a353437 515 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 203 217 4.8E-20 T 01-11-2018 D3790_01285 a90b113890b1351b3d8915048a353437 515 SUPERFAMILY SSF53335 16 513 8.76E-134 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_01285 a90b113890b1351b3d8915048a353437 515 Gene3D G3DSA:1.20.1260.30 2 147 4.2E-44 T 01-11-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily D3790_01285 a90b113890b1351b3d8915048a353437 515 Pfam PF02384 N-6 DNA Methylase 156 478 1.1E-111 T 01-11-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 D3790_01285 a90b113890b1351b3d8915048a353437 515 Gene3D G3DSA:3.40.50.150 157 461 1.1E-111 T 01-11-2018 D3790_01285 a90b113890b1351b3d8915048a353437 515 Pfam PF12161 HsdM N-terminal domain 16 144 4.3E-24 T 01-11-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain D3790_17295 27b8e965d4049a5554ab0d412e44d323 226 SUPERFAMILY SSF56784 1 207 1.63E-31 T 01-11-2018 IPR036412 HAD-like superfamily D3790_17295 27b8e965d4049a5554ab0d412e44d323 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 123 196 1.3E-5 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D3790_17295 27b8e965d4049a5554ab0d412e44d323 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 204 8.8E-20 T 01-11-2018 D3790_17295 27b8e965d4049a5554ab0d412e44d323 226 Gene3D G3DSA:1.10.150.240 15 106 6.2E-35 T 01-11-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D3790_17295 27b8e965d4049a5554ab0d412e44d323 226 Gene3D G3DSA:3.40.50.1000 4 210 6.2E-35 T 01-11-2018 IPR023214 HAD superfamily D3790_04685 8f7bb8f0a56103693b2a6dfeb6539740 420 Pfam PF17152 Periplasmic sensor domain 45 146 2.6E-29 T 01-11-2018 IPR033417 Periplasmic sensor domain CHASE8 D3790_04685 8f7bb8f0a56103693b2a6dfeb6539740 420 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 245 402 2.8E-41 T 01-11-2018 IPR000160 GGDEF domain D3790_04685 8f7bb8f0a56103693b2a6dfeb6539740 420 SMART SM00267 238 408 7.5E-54 T 01-11-2018 IPR000160 GGDEF domain D3790_04685 8f7bb8f0a56103693b2a6dfeb6539740 420 Gene3D G3DSA:3.30.70.270 246 414 1.4E-47 T 01-11-2018 D3790_04685 8f7bb8f0a56103693b2a6dfeb6539740 420 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 402 2.3E-40 T 01-11-2018 IPR000160 GGDEF domain D3790_04685 8f7bb8f0a56103693b2a6dfeb6539740 420 SUPERFAMILY SSF55073 254 404 1.26E-41 T 01-11-2018 IPR029787 Nucleotide cyclase D3790_06885 65f6f5aa14a66793c6da5a234f6151b3 257 SUPERFAMILY SSF54427 14 105 2.72E-20 T 01-11-2018 IPR032710 NTF2-like domain superfamily D3790_06885 65f6f5aa14a66793c6da5a234f6151b3 257 Pfam PF12680 SnoaL-like domain 15 103 2.3E-12 T 01-11-2018 IPR037401 SnoaL-like domain D3790_06885 65f6f5aa14a66793c6da5a234f6151b3 257 Pfam PF12680 SnoaL-like domain 147 236 2.9E-6 T 01-11-2018 IPR037401 SnoaL-like domain D3790_06885 65f6f5aa14a66793c6da5a234f6151b3 257 Gene3D G3DSA:3.10.450.50 130 257 3.1E-22 T 01-11-2018 D3790_06885 65f6f5aa14a66793c6da5a234f6151b3 257 Gene3D G3DSA:3.10.450.50 1 118 1.9E-24 T 01-11-2018 D3790_06885 65f6f5aa14a66793c6da5a234f6151b3 257 SUPERFAMILY SSF54427 134 241 8.78E-15 T 01-11-2018 IPR032710 NTF2-like domain superfamily D3790_03815 3455d4d8d41688768ac2fb915da36766 367 Gene3D G3DSA:2.40.50.100 302 364 4.1E-12 T 01-11-2018 D3790_03815 3455d4d8d41688768ac2fb915da36766 367 Gene3D G3DSA:3.40.50.300 17 237 9.7E-57 T 01-11-2018 D3790_03815 3455d4d8d41688768ac2fb915da36766 367 Pfam PF03459 TOBE domain 303 363 3.0E-14 T 01-11-2018 IPR005116 Transport-associated OB, type 1 D3790_03815 3455d4d8d41688768ac2fb915da36766 367 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_03815 3455d4d8d41688768ac2fb915da36766 367 SMART SM00382 36 219 6.0E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_03815 3455d4d8d41688768ac2fb915da36766 367 SUPERFAMILY SSF52540 23 233 2.72E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_03815 3455d4d8d41688768ac2fb915da36766 367 Pfam PF00005 ABC transporter 29 169 5.6E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_03815 3455d4d8d41688768ac2fb915da36766 367 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 15 363 8.1E-145 T 01-11-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 D3790_03815 3455d4d8d41688768ac2fb915da36766 367 SUPERFAMILY SSF50331 252 363 6.59E-19 T 01-11-2018 IPR008995 Molybdate/tungstate binding, C-terminal D3790_04855 871ca980364fc0dcc779a21fd1726859 714 Gene3D G3DSA:3.40.50.10950 397 708 9.6E-135 T 01-11-2018 D3790_04855 871ca980364fc0dcc779a21fd1726859 714 PIRSF PIRSF006107 1 713 0.0 T 01-11-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 D3790_04855 871ca980364fc0dcc779a21fd1726859 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 405 705 2.9E-135 T 01-11-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 D3790_04855 871ca980364fc0dcc779a21fd1726859 714 SUPERFAMILY SSF75138 228 352 2.75E-25 T 01-11-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily D3790_04855 871ca980364fc0dcc779a21fd1726859 714 Gene3D G3DSA:3.40.50.300 5 208 1.1E-11 T 01-11-2018 D3790_04855 871ca980364fc0dcc779a21fd1726859 714 Pfam PF07085 DRTGG domain 232 343 4.9E-29 T 01-11-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 D3790_04855 871ca980364fc0dcc779a21fd1726859 714 SUPERFAMILY SSF53659 391 709 1.07E-94 T 01-11-2018 D3790_04855 871ca980364fc0dcc779a21fd1726859 714 Gene3D G3DSA:3.40.1390.20 224 364 3.3E-15 T 01-11-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily D3790_04855 871ca980364fc0dcc779a21fd1726859 714 Pfam PF13500 AAA domain 3 228 6.5E-46 T 01-11-2018 D3790_04855 871ca980364fc0dcc779a21fd1726859 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 390 705 1.2E-125 T 01-11-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 D3790_04855 871ca980364fc0dcc779a21fd1726859 714 Gene3D G3DSA:3.40.50.10750 528 681 9.6E-135 T 01-11-2018 D3790_04855 871ca980364fc0dcc779a21fd1726859 714 SUPERFAMILY SSF52540 3 239 8.5E-25 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_03440 a766838be319c32e5b1a73517a4feee7 340 Pfam PF01548 Transposase 5 140 2.2E-11 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D3790_03440 a766838be319c32e5b1a73517a4feee7 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 1.3E-23 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D3790_04300 c642c76fcae90895e77384d5c9716bda 244 Gene3D G3DSA:3.40.1410.10 99 233 8.5E-31 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily D3790_04300 c642c76fcae90895e77384d5c9716bda 244 SUPERFAMILY SSF46785 10 83 2.49E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_04300 c642c76fcae90895e77384d5c9716bda 244 Gene3D G3DSA:1.10.10.10 14 83 2.5E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_04300 c642c76fcae90895e77384d5c9716bda 244 Pfam PF07702 UTRA domain 101 237 7.2E-33 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 D3790_04300 c642c76fcae90895e77384d5c9716bda 244 SMART SM00866 100 237 1.9E-29 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 D3790_04300 c642c76fcae90895e77384d5c9716bda 244 SUPERFAMILY SSF64288 67 242 1.57E-39 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily D3790_04300 c642c76fcae90895e77384d5c9716bda 244 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 15 243 6.8E-99 T 01-11-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 D3790_04300 c642c76fcae90895e77384d5c9716bda 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 1.4E-7 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_04300 c642c76fcae90895e77384d5c9716bda 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 1.4E-7 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_04300 c642c76fcae90895e77384d5c9716bda 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 79 1.3E-18 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_04300 c642c76fcae90895e77384d5c9716bda 244 SMART SM00345 20 79 1.2E-17 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_02380 c9cb09f811e30870ea65dce12ac31c7a 64 Gene3D G3DSA:1.10.10.600 1 64 8.3E-31 T 01-11-2018 IPR036762 IscX-like superfamily D3790_02380 c9cb09f811e30870ea65dce12ac31c7a 64 SUPERFAMILY SSF140319 1 63 6.67E-27 T 01-11-2018 IPR036762 IscX-like superfamily D3790_02380 c9cb09f811e30870ea65dce12ac31c7a 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 3.6E-32 T 01-11-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 D3790_02380 c9cb09f811e30870ea65dce12ac31c7a 64 PIRSF PIRSF039003 1 64 5.6E-33 T 01-11-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 D3790_02380 c9cb09f811e30870ea65dce12ac31c7a 64 Pfam PF04384 Iron-sulphur cluster assembly 1 64 2.5E-33 T 01-11-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 D3790_16340 794f9300f7205a4b20d43c73fa0a4b1a 371 Pfam PF00266 Aminotransferase class-V 52 225 1.3E-6 T 01-11-2018 IPR000192 Aminotransferase class V domain D3790_16340 794f9300f7205a4b20d43c73fa0a4b1a 371 Gene3D G3DSA:3.40.640.10 1 246 3.1E-60 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_16340 794f9300f7205a4b20d43c73fa0a4b1a 371 Gene3D G3DSA:3.90.1150.130 247 359 9.5E-50 T 01-11-2018 D3790_16340 794f9300f7205a4b20d43c73fa0a4b1a 371 SUPERFAMILY SSF53383 37 316 7.9E-30 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_11460 7d357a4551ce4365146b8afc98f0c529 654 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.6E-43 T 01-11-2018 D3790_11460 7d357a4551ce4365146b8afc98f0c529 654 Gene3D G3DSA:3.30.300.150 508 636 2.1E-42 T 01-11-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_11460 7d357a4551ce4365146b8afc98f0c529 654 SMART SM00382 37 178 6.7E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_11460 7d357a4551ce4365146b8afc98f0c529 654 Gene3D G3DSA:1.20.272.10 242 363 4.3E-43 T 01-11-2018 D3790_11460 7d357a4551ce4365146b8afc98f0c529 654 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 510 651 4.3E-56 T 01-11-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_11460 7d357a4551ce4365146b8afc98f0c529 654 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 430 508 1.4E-15 T 01-11-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_11460 7d357a4551ce4365146b8afc98f0c529 654 SUPERFAMILY SSF52540 34 221 7.08E-56 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_11460 7d357a4551ce4365146b8afc98f0c529 654 Gene3D G3DSA:1.10.8.60 8 240 4.0E-101 T 01-11-2018 D3790_11460 7d357a4551ce4365146b8afc98f0c529 654 Gene3D G3DSA:3.40.50.300 13 177 4.0E-101 T 01-11-2018 D3790_11460 7d357a4551ce4365146b8afc98f0c529 654 SUPERFAMILY SSF48019 243 367 1.53E-34 T 01-11-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 D3790_11460 7d357a4551ce4365146b8afc98f0c529 654 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 363 1.3E-32 T 01-11-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 D3790_11460 7d357a4551ce4365146b8afc98f0c529 654 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 2.8E-5 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 D3790_11460 7d357a4551ce4365146b8afc98f0c529 654 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 2.8E-5 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 D3790_11460 7d357a4551ce4365146b8afc98f0c529 654 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 2.0E-131 T 01-11-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 D3790_09690 935bfe03795bef3aadea4563fa7c568d 190 PIRSF PIRSF003093 1 190 5.1E-61 T 01-11-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 D3790_09690 935bfe03795bef3aadea4563fa7c568d 190 Gene3D G3DSA:3.40.50.300 54 167 1.3E-28 T 01-11-2018 D3790_09690 935bfe03795bef3aadea4563fa7c568d 190 SUPERFAMILY SSF52540 54 168 5.31E-30 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09690 935bfe03795bef3aadea4563fa7c568d 190 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 190 34.65 T 01-11-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 D3790_09690 935bfe03795bef3aadea4563fa7c568d 190 Pfam PF03846 Cell division inhibitor SulA 44 142 4.5E-42 T 01-11-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 D3790_16495 1910f7bcd9bd58a98ac494e2914ec505 694 Pfam PF05746 DALR anticodon binding domain 582 678 5.8E-9 T 01-11-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 D3790_16495 1910f7bcd9bd58a98ac494e2914ec505 694 SUPERFAMILY SSF109604 339 539 5.86E-16 T 01-11-2018 D3790_16495 1910f7bcd9bd58a98ac494e2914ec505 694 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 7.0E-213 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D3790_16495 1910f7bcd9bd58a98ac494e2914ec505 694 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.642 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D3790_16495 1910f7bcd9bd58a98ac494e2914ec505 694 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D3790_16495 1910f7bcd9bd58a98ac494e2914ec505 694 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 5.2E-37 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D3790_16495 1910f7bcd9bd58a98ac494e2914ec505 694 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 5.2E-37 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D3790_16495 1910f7bcd9bd58a98ac494e2914ec505 694 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 5.2E-37 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D3790_16495 1910f7bcd9bd58a98ac494e2914ec505 694 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 5.2E-37 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D3790_16495 1910f7bcd9bd58a98ac494e2914ec505 694 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 5.2E-37 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D3790_18230 e989220b23fbc5d426f531547eae03ed 444 SUPERFAMILY SSF53633 4 290 1.95E-66 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily D3790_18230 e989220b23fbc5d426f531547eae03ed 444 Gene3D G3DSA:3.40.1160.10 7 292 8.1E-81 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily D3790_18230 e989220b23fbc5d426f531547eae03ed 444 SUPERFAMILY SSF55729 296 418 1.74E-17 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_18230 e989220b23fbc5d426f531547eae03ed 444 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 441 223.834 T 01-11-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 D3790_18230 e989220b23fbc5d426f531547eae03ed 444 Gene3D G3DSA:3.40.630.30 293 441 2.1E-37 T 01-11-2018 D3790_18230 e989220b23fbc5d426f531547eae03ed 444 PIRSF PIRSF000423 1 441 1.4E-201 T 01-11-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 D3790_18230 e989220b23fbc5d426f531547eae03ed 444 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 441 1.9E-187 T 01-11-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 D3790_18230 e989220b23fbc5d426f531547eae03ed 444 Pfam PF00583 Acetyltransferase (GNAT) family 335 412 3.8E-7 T 01-11-2018 IPR000182 GNAT domain D3790_18230 e989220b23fbc5d426f531547eae03ed 444 Pfam PF00696 Amino acid kinase family 25 267 6.0E-29 T 01-11-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D3790_08375 8eed3babbfdaf079d782b668bae1b711 179 SUPERFAMILY SSF54364 13 86 3.01E-29 T 01-11-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 D3790_08375 8eed3babbfdaf079d782b668bae1b711 179 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 177 4.5E-38 T 01-11-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 D3790_08375 8eed3babbfdaf079d782b668bae1b711 179 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 01-11-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 D3790_08375 8eed3babbfdaf079d782b668bae1b711 179 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 179 2.1E-76 T 01-11-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 D3790_08375 8eed3babbfdaf079d782b668bae1b711 179 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 179 30.787 T 01-11-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 D3790_08375 8eed3babbfdaf079d782b668bae1b711 179 Gene3D G3DSA:3.30.110.10 84 179 9.2E-40 T 01-11-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 D3790_08375 8eed3babbfdaf079d782b668bae1b711 179 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 2.1E-31 T 01-11-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 D3790_08375 8eed3babbfdaf079d782b668bae1b711 179 SUPERFAMILY SSF55200 90 179 3.4E-35 T 01-11-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 D3790_08375 8eed3babbfdaf079d782b668bae1b711 179 Gene3D G3DSA:3.10.20.80 10 83 6.8E-33 T 01-11-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 D3790_17990 1cc22a6f4bb555f41bd6ba530ee7e348 390 SUPERFAMILY SSF81891 120 382 6.41E-48 T 01-11-2018 D3790_17990 1cc22a6f4bb555f41bd6ba530ee7e348 390 Pfam PF01743 Poly A polymerase head domain 3 122 2.1E-16 T 01-11-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 D3790_17990 1cc22a6f4bb555f41bd6ba530ee7e348 390 SUPERFAMILY SSF81301 2 119 2.83E-29 T 01-11-2018 D3790_17990 1cc22a6f4bb555f41bd6ba530ee7e348 390 PIRSF PIRSF000813 259 389 6.9E-32 T 01-11-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 D3790_17990 1cc22a6f4bb555f41bd6ba530ee7e348 390 PIRSF PIRSF000813 1 262 1.5E-134 T 01-11-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 D3790_17990 1cc22a6f4bb555f41bd6ba530ee7e348 390 Hamap MF_01262 CCA-adding enzyme [cca]. 1 382 45.538 T 01-11-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 D3790_17990 1cc22a6f4bb555f41bd6ba530ee7e348 390 Gene3D G3DSA:1.10.3090.10 122 388 2.5E-45 T 01-11-2018 D3790_17990 1cc22a6f4bb555f41bd6ba530ee7e348 390 Gene3D G3DSA:3.30.460.10 1 121 3.7E-26 T 01-11-2018 D3790_17990 1cc22a6f4bb555f41bd6ba530ee7e348 390 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 3.4E-15 T 01-11-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 D3790_04760 b27fff8cad57893217611152ff07c84a 614 Pfam PF00361 Proton-conducting membrane transporter 136 428 4.5E-95 T 01-11-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04760 b27fff8cad57893217611152ff07c84a 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 421 440 8.3E-55 T 01-11-2018 D3790_04760 b27fff8cad57893217611152ff07c84a 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 8.3E-55 T 01-11-2018 D3790_04760 b27fff8cad57893217611152ff07c84a 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 160 181 8.3E-55 T 01-11-2018 D3790_04760 b27fff8cad57893217611152ff07c84a 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 250 276 8.3E-55 T 01-11-2018 D3790_04760 b27fff8cad57893217611152ff07c84a 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 85 110 8.3E-55 T 01-11-2018 D3790_04760 b27fff8cad57893217611152ff07c84a 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 8.3E-55 T 01-11-2018 D3790_04760 b27fff8cad57893217611152ff07c84a 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 113 133 8.3E-55 T 01-11-2018 D3790_04760 b27fff8cad57893217611152ff07c84a 614 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 611 2.8E-230 T 01-11-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04760 b27fff8cad57893217611152ff07c84a 614 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 124 2.3E-23 T 01-11-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04760 b27fff8cad57893217611152ff07c84a 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 268 290 1.1E-10 T 01-11-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 D3790_04760 b27fff8cad57893217611152ff07c84a 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 87 107 1.1E-10 T 01-11-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 D3790_04760 b27fff8cad57893217611152ff07c84a 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 61 85 1.1E-10 T 01-11-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 D3790_04760 b27fff8cad57893217611152ff07c84a 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 420 442 1.1E-10 T 01-11-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 D3790_13950 f3a7905499c05ea248ba4e32bb6506ed 503 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 495 51.198 T 01-11-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 D3790_13950 f3a7905499c05ea248ba4e32bb6506ed 503 Pfam PF02541 Ppx/GppA phosphatase family 21 301 5.7E-91 T 01-11-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 D3790_13950 f3a7905499c05ea248ba4e32bb6506ed 503 SUPERFAMILY SSF109604 307 497 1.41E-46 T 01-11-2018 D3790_13950 f3a7905499c05ea248ba4e32bb6506ed 503 PIRSF PIRSF001267 1 497 4.4E-175 T 01-11-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 D3790_13950 f3a7905499c05ea248ba4e32bb6506ed 503 Gene3D G3DSA:3.30.420.40 9 297 1.4E-83 T 01-11-2018 D3790_13950 f3a7905499c05ea248ba4e32bb6506ed 503 SUPERFAMILY SSF53067 7 128 4.01E-37 T 01-11-2018 D3790_13950 f3a7905499c05ea248ba4e32bb6506ed 503 SUPERFAMILY SSF53067 132 301 1.02E-39 T 01-11-2018 D3790_13950 f3a7905499c05ea248ba4e32bb6506ed 503 Gene3D G3DSA:1.10.3210.10 305 501 1.4E-49 T 01-11-2018 D3790_13950 f3a7905499c05ea248ba4e32bb6506ed 503 Gene3D G3DSA:3.30.420.150 112 289 1.4E-83 T 01-11-2018 D3790_18505 f631c9215556a50555ae933312436bd4 573 Gene3D G3DSA:3.40.50.800 4 554 2.3E-240 T 01-11-2018 IPR036621 Anticodon-binding domain superfamily D3790_18505 f631c9215556a50555ae933312436bd4 573 Pfam PF03129 Anticodon binding domain 475 567 2.3E-21 T 01-11-2018 IPR004154 Anticodon-binding D3790_18505 f631c9215556a50555ae933312436bd4 573 SUPERFAMILY SSF55681 10 478 4.79E-105 T 01-11-2018 D3790_18505 f631c9215556a50555ae933312436bd4 573 SUPERFAMILY SSF52954 462 570 4.83E-33 T 01-11-2018 D3790_18505 f631c9215556a50555ae933312436bd4 573 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 458 5.0E-50 T 01-11-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_18505 f631c9215556a50555ae933312436bd4 573 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 42.577 T 01-11-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 D3790_18505 f631c9215556a50555ae933312436bd4 573 PIRSF PIRSF001535 1 573 4.5E-273 T 01-11-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 D3790_18505 f631c9215556a50555ae933312436bd4 573 SUPERFAMILY SSF55826 218 390 3.01E-30 T 01-11-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 D3790_18505 f631c9215556a50555ae933312436bd4 573 Gene3D G3DSA:3.90.960.10 240 389 2.3E-240 T 01-11-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 D3790_18505 f631c9215556a50555ae933312436bd4 573 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 567 2.6E-269 T 01-11-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 D3790_18505 f631c9215556a50555ae933312436bd4 573 Pfam PF04073 Aminoacyl-tRNA editing domain 257 377 4.7E-24 T 01-11-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 D3790_18505 f631c9215556a50555ae933312436bd4 573 Gene3D G3DSA:3.30.930.10 11 465 2.3E-240 T 01-11-2018 D3790_18505 f631c9215556a50555ae933312436bd4 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 6.0E-18 T 01-11-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 D3790_18505 f631c9215556a50555ae933312436bd4 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 6.0E-18 T 01-11-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 D3790_18505 f631c9215556a50555ae933312436bd4 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 6.0E-18 T 01-11-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 D3790_18505 f631c9215556a50555ae933312436bd4 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 6.0E-18 T 01-11-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 D3790_07375 85acfae4dfc74b929d93be2a6c1c513e 261 Gene3D G3DSA:1.10.3470.10 28 260 1.8E-9 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_07375 85acfae4dfc74b929d93be2a6c1c513e 261 Pfam PF00950 ABC 3 transport family 1 256 4.6E-85 T 01-11-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 D3790_07375 85acfae4dfc74b929d93be2a6c1c513e 261 SUPERFAMILY SSF81345 3 255 7.32E-40 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_13700 3f44294ea450c37e456137f95fe0dc0d 326 Pfam PF02666 Phosphatidylserine decarboxylase 83 301 4.8E-58 T 01-11-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 D3790_13700 3f44294ea450c37e456137f95fe0dc0d 326 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 69 305 1.4E-90 T 01-11-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 D3790_13700 3f44294ea450c37e456137f95fe0dc0d 326 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 30 307 47.566 T 01-11-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 SUPERFAMILY SSF82693 146 333 2.27E-22 T 01-11-2018 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 Gene3D G3DSA:1.20.1640.10 19 512 1.7E-295 T 01-11-2018 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 Gene3D G3DSA:3.30.2090.10 188 278 1.7E-295 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1038 35.577 T 01-11-2018 IPR022831 Multidrug resistance protein MdtB D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 SUPERFAMILY SSF82714 192 275 2.75E-14 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 Gene3D G3DSA:1.20.1640.10 513 1019 1.7E-295 T 01-11-2018 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 SUPERFAMILY SSF82866 801 1024 1.44E-42 T 01-11-2018 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 SUPERFAMILY SSF82714 719 801 9.55E-17 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 SUPERFAMILY SSF82866 299 499 6.41E-47 T 01-11-2018 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 Gene3D G3DSA:3.30.70.1430 49 811 1.7E-295 T 01-11-2018 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 Gene3D G3DSA:3.30.2090.10 715 803 1.7E-295 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 SUPERFAMILY SSF82693 49 142 9.42E-23 T 01-11-2018 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 7.6E-82 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 7.6E-82 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 7.6E-82 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 7.6E-82 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 7.6E-82 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 7.6E-82 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 7.6E-82 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 7.6E-82 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 7.6E-82 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 Gene3D G3DSA:3.30.70.1320 144 335 1.7E-295 T 01-11-2018 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 SUPERFAMILY SSF82693 565 661 6.28E-17 T 01-11-2018 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 Gene3D G3DSA:3.30.70.1440 663 861 1.7E-295 T 01-11-2018 D3790_05390 995a31f5dc71e286e2362baa3ac45adf 1057 Gene3D G3DSA:3.30.70.1430 567 662 1.7E-295 T 01-11-2018 D3790_07250 8a3ec7df77d10a20db213ee37c4d0ff1 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 18.795 T 01-11-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 D3790_07250 8a3ec7df77d10a20db213ee37c4d0ff1 89 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 6.1E-25 T 01-11-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 D3790_07250 8a3ec7df77d10a20db213ee37c4d0ff1 89 Gene3D G3DSA:3.30.1070.10 31 87 6.0E-28 T 01-11-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 D3790_07250 8a3ec7df77d10a20db213ee37c4d0ff1 89 SUPERFAMILY SSF55229 32 84 1.7E-17 T 01-11-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 D3790_07250 8a3ec7df77d10a20db213ee37c4d0ff1 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 1.0E-33 T 01-11-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 D3790_07755 e1241b1131852eccc601a20ab4dfaf34 145 PRINTS PR01438 Universal stress protein signature 106 118 1.1E-11 T 01-11-2018 IPR006015 Universal stress protein A D3790_07755 e1241b1131852eccc601a20ab4dfaf34 145 PRINTS PR01438 Universal stress protein signature 2 20 1.1E-11 T 01-11-2018 IPR006015 Universal stress protein A D3790_07755 e1241b1131852eccc601a20ab4dfaf34 145 PRINTS PR01438 Universal stress protein signature 123 145 1.1E-11 T 01-11-2018 IPR006015 Universal stress protein A D3790_07755 e1241b1131852eccc601a20ab4dfaf34 145 SUPERFAMILY SSF52402 1 145 1.59E-27 T 01-11-2018 D3790_07755 e1241b1131852eccc601a20ab4dfaf34 145 Pfam PF00582 Universal stress protein family 1 145 8.4E-22 T 01-11-2018 IPR006016 UspA D3790_07755 e1241b1131852eccc601a20ab4dfaf34 145 Gene3D G3DSA:3.40.50.620 1 145 5.2E-32 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_18920 ab1d3505fc34d6c23130367f98f146c9 318 SUPERFAMILY SSF53850 88 289 2.64E-40 T 01-11-2018 D3790_18920 ab1d3505fc34d6c23130367f98f146c9 318 Pfam PF03466 LysR substrate binding domain 87 288 1.5E-43 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_18920 ab1d3505fc34d6c23130367f98f146c9 318 Gene3D G3DSA:1.10.10.10 1 89 2.4E-28 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_18920 ab1d3505fc34d6c23130367f98f146c9 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.6E-16 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_18920 ab1d3505fc34d6c23130367f98f146c9 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.2E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_18920 ab1d3505fc34d6c23130367f98f146c9 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.2E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_18920 ab1d3505fc34d6c23130367f98f146c9 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.2E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_18920 ab1d3505fc34d6c23130367f98f146c9 318 Gene3D G3DSA:3.40.190.10 90 286 3.1E-71 T 01-11-2018 D3790_18920 ab1d3505fc34d6c23130367f98f146c9 318 SUPERFAMILY SSF46785 2 109 1.28E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_18920 ab1d3505fc34d6c23130367f98f146c9 318 Gene3D G3DSA:3.40.190.10 160 263 3.1E-71 T 01-11-2018 D3790_10445 e9084366adc33876a161cbc1e68cbf07 185 Gene3D G3DSA:2.60.40.3910 1 172 2.8E-8 T 01-11-2018 IPR038712 PixA-like superfamily D3790_10445 e9084366adc33876a161cbc1e68cbf07 185 Pfam PF12306 Inclusion body protein 3 173 3.0E-39 T 01-11-2018 IPR021087 Uncharacterised protein family PixA/AidA D3790_09675 91bf140790b1a57cff7fa30a39f920af 344 SUPERFAMILY SSF53098 207 342 1.69E-8 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_09675 91bf140790b1a57cff7fa30a39f920af 344 Pfam PF13358 DDE superfamily endonuclease 177 311 3.8E-29 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_09675 91bf140790b1a57cff7fa30a39f920af 344 Gene3D G3DSA:3.30.420.470 143 338 5.9E-14 T 01-11-2018 D3790_09675 91bf140790b1a57cff7fa30a39f920af 344 SUPERFAMILY SSF46689 13 138 1.61E-11 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_09675 91bf140790b1a57cff7fa30a39f920af 344 Pfam PF13551 Winged helix-turn helix 30 83 9.6E-8 T 01-11-2018 D3790_02420 1f750bfae80dd76a3c0e459647d257ea 392 Pfam PF04055 Radical SAM superfamily 128 296 9.9E-18 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D3790_02420 1f750bfae80dd76a3c0e459647d257ea 392 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 22 377 9.1E-171 T 01-11-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 D3790_02420 1f750bfae80dd76a3c0e459647d257ea 392 PIRSF PIRSF006004 18 385 4.7E-146 T 01-11-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 D3790_02420 1f750bfae80dd76a3c0e459647d257ea 392 SUPERFAMILY SSF102114 124 339 5.49E-14 T 01-11-2018 D3790_02420 1f750bfae80dd76a3c0e459647d257ea 392 Gene3D G3DSA:1.10.150.530 11 86 1.5E-29 T 01-11-2018 D3790_02420 1f750bfae80dd76a3c0e459647d257ea 392 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 25 372 73.977 T 01-11-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 D3790_02420 1f750bfae80dd76a3c0e459647d257ea 392 Gene3D G3DSA:3.20.20.70 87 357 1.9E-113 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 SMART SM00487 596 786 1.5E-31 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 Pfam PF02559 CarD-like/TRCF domain 476 571 8.4E-26 T 01-11-2018 IPR003711 CarD-like/TRCF domain D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 Gene3D G3DSA:2.30.30.840 479 537 9.5E-233 T 01-11-2018 D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 32 1126 27.594 T 01-11-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 Gene3D G3DSA:3.40.50.11180 24 333 8.3E-122 T 01-11-2018 D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 SUPERFAMILY SSF52540 8 340 5.2E-97 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 SUPERFAMILY SSF141259 467 544 5.75E-24 T 01-11-2018 IPR036101 CarD-like/TRCF domain superfamily D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 Pfam PF00271 Helicase conserved C-terminal domain 802 905 8.6E-17 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 SUPERFAMILY SSF52540 349 462 2.01E-28 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 SUPERFAMILY SSF52540 519 779 1.87E-60 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 SUPERFAMILY SSF52540 778 986 1.18E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 Gene3D G3DSA:3.90.1150.50 1000 1147 1.3E-46 T 01-11-2018 IPR037235 TRCF-like, C-terminal domain D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 Gene3D G3DSA:3.30.2060.10 128 213 8.3E-122 T 01-11-2018 D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1078 0.0 T 01-11-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 Pfam PF00270 DEAD/DEAH box helicase 601 761 3.9E-19 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 Pfam PF03461 TRCF domain 1005 1097 4.1E-28 T 01-11-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 Gene3D G3DSA:3.40.50.11140 353 449 9.3E-36 T 01-11-2018 D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 Gene3D G3DSA:3.40.50.300 474 986 9.5E-233 T 01-11-2018 D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 Gene3D G3DSA:3.40.50.300 538 777 9.5E-233 T 01-11-2018 D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 SMART SM00982 1004 1104 1.0E-49 T 01-11-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 SUPERFAMILY SSF143517 991 1142 4.58E-43 T 01-11-2018 IPR037235 TRCF-like, C-terminal domain D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 SMART SM00490 822 906 4.9E-18 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_05215 9a7ec1d3ba608adc487aa82257bb7dfe 1148 SMART SM01058 475 572 1.9E-50 T 01-11-2018 IPR003711 CarD-like/TRCF domain D3790_15330 579f89bffd87430a9cdc7008eb549a6a 208 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 202 7.4E-42 T 01-11-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_15330 579f89bffd87430a9cdc7008eb549a6a 208 PIRSF PIRSF000349 1 208 3.5E-80 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_15330 579f89bffd87430a9cdc7008eb549a6a 208 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 1.1E-27 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_15330 579f89bffd87430a9cdc7008eb549a6a 208 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 1.1E-27 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_15330 579f89bffd87430a9cdc7008eb549a6a 208 PRINTS PR01703 Manganese superoxide dismutase signature 167 179 1.1E-27 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_15330 579f89bffd87430a9cdc7008eb549a6a 208 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.1E-27 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_15330 579f89bffd87430a9cdc7008eb549a6a 208 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.1E-27 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_15330 579f89bffd87430a9cdc7008eb549a6a 208 SUPERFAMILY SSF46609 1 90 2.88E-34 T 01-11-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_15330 579f89bffd87430a9cdc7008eb549a6a 208 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 1.1E-30 T 01-11-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_15330 579f89bffd87430a9cdc7008eb549a6a 208 Gene3D G3DSA:2.40.500.20 94 208 1.3E-50 T 01-11-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_15330 579f89bffd87430a9cdc7008eb549a6a 208 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 169 176 - T 01-11-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_15330 579f89bffd87430a9cdc7008eb549a6a 208 Gene3D G3DSA:1.10.287.990 20 90 4.3E-29 T 01-11-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_15330 579f89bffd87430a9cdc7008eb549a6a 208 SUPERFAMILY SSF54719 94 205 1.06E-45 T 01-11-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D3790_04165 745b2b38a560900e7aea99498bc6e667 505 Pfam PF00156 Phosphoribosyl transferase domain 293 395 1.8E-8 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 D3790_04165 745b2b38a560900e7aea99498bc6e667 505 PIRSF PIRSF000485 1 483 2.2E-166 T 01-11-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 D3790_04165 745b2b38a560900e7aea99498bc6e667 505 Gene3D G3DSA:3.40.50.2020 279 443 4.2E-158 T 01-11-2018 D3790_04165 745b2b38a560900e7aea99498bc6e667 505 Pfam PF13522 Glutamine amidotransferase domain 65 210 3.6E-15 T 01-11-2018 D3790_04165 745b2b38a560900e7aea99498bc6e667 505 Gene3D G3DSA:3.60.20.10 2 414 4.2E-158 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D3790_04165 745b2b38a560900e7aea99498bc6e667 505 SUPERFAMILY SSF56235 2 259 1.03E-74 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D3790_04165 745b2b38a560900e7aea99498bc6e667 505 SUPERFAMILY SSF53271 252 485 7.6E-71 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like D3790_04165 745b2b38a560900e7aea99498bc6e667 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.355 T 01-11-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 D3790_04165 745b2b38a560900e7aea99498bc6e667 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 6.0E-160 T 01-11-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 D3790_09990 9e752a66b1821641c3aa365a506c1e19 106 Gene3D G3DSA:3.30.1390.10 1 106 2.3E-44 T 01-11-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like D3790_09990 9e752a66b1821641c3aa365a506c1e19 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 17 101 28.244 T 01-11-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS D3790_09990 9e752a66b1821641c3aa365a506c1e19 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 2.8E-34 T 01-11-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 D3790_09990 9e752a66b1821641c3aa365a506c1e19 106 SUPERFAMILY SSF54736 22 105 1.94E-32 T 01-11-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like D3790_10745 abef975cb9397293df5ad3bffa26821e 101 Gene3D G3DSA:1.10.20.30 1 47 2.0E-24 T 01-11-2018 D3790_10745 abef975cb9397293df5ad3bffa26821e 101 SUPERFAMILY SSF102829 6 94 7.06E-25 T 01-11-2018 IPR036192 Cell division protein ZapA-like superfamily D3790_10745 abef975cb9397293df5ad3bffa26821e 101 Pfam PF05164 Cell division protein ZapA 6 90 3.0E-19 T 01-11-2018 IPR007838 Cell division protein ZapA-like D3790_15155 60dbc90c43ff6ca5469eb4bae20f4ff6 307 SUPERFAMILY SSF53613 7 304 1.31E-51 T 01-11-2018 IPR029056 Ribokinase-like D3790_15155 60dbc90c43ff6ca5469eb4bae20f4ff6 307 PRINTS PR00990 Ribokinase signature 220 231 4.4E-5 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 D3790_15155 60dbc90c43ff6ca5469eb4bae20f4ff6 307 PRINTS PR00990 Ribokinase signature 10 31 4.4E-5 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 D3790_15155 60dbc90c43ff6ca5469eb4bae20f4ff6 307 PRINTS PR00990 Ribokinase signature 37 56 4.4E-5 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 D3790_15155 60dbc90c43ff6ca5469eb4bae20f4ff6 307 Gene3D G3DSA:3.40.1190.20 4 305 2.2E-53 T 01-11-2018 IPR029056 Ribokinase-like D3790_15155 60dbc90c43ff6ca5469eb4bae20f4ff6 307 Pfam PF00294 pfkB family carbohydrate kinase 8 294 6.3E-35 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB D3790_05475 366b6406da3b78f5888cfe46d4e71bb9 300 SUPERFAMILY SSF51569 8 298 1.05E-94 T 01-11-2018 D3790_05475 366b6406da3b78f5888cfe46d4e71bb9 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 42 63 1.5E-34 T 01-11-2018 IPR002220 DapA-like GO:0016829 D3790_05475 366b6406da3b78f5888cfe46d4e71bb9 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 78 96 1.5E-34 T 01-11-2018 IPR002220 DapA-like GO:0016829 D3790_05475 366b6406da3b78f5888cfe46d4e71bb9 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 110 126 1.5E-34 T 01-11-2018 IPR002220 DapA-like GO:0016829 D3790_05475 366b6406da3b78f5888cfe46d4e71bb9 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 135 152 1.5E-34 T 01-11-2018 IPR002220 DapA-like GO:0016829 D3790_05475 366b6406da3b78f5888cfe46d4e71bb9 300 Gene3D G3DSA:3.20.20.70 7 300 1.1E-108 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_05475 366b6406da3b78f5888cfe46d4e71bb9 300 PIRSF PIRSF001365 5 300 1.1E-89 T 01-11-2018 IPR002220 DapA-like GO:0016829 D3790_05475 366b6406da3b78f5888cfe46d4e71bb9 300 Pfam PF00701 Dihydrodipicolinate synthetase family 9 296 7.9E-110 T 01-11-2018 IPR002220 DapA-like GO:0016829 D3790_05475 366b6406da3b78f5888cfe46d4e71bb9 300 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 140 170 - T 01-11-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 D3790_05475 366b6406da3b78f5888cfe46d4e71bb9 300 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 11 296 2.3E-112 T 01-11-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D3790_05475 366b6406da3b78f5888cfe46d4e71bb9 300 SMART SM01130 8 298 6.3E-133 T 01-11-2018 IPR002220 DapA-like GO:0016829 D3790_05475 366b6406da3b78f5888cfe46d4e71bb9 300 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 8 296 61.885 T 01-11-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D3790_15530 bfb8ebdf2ff47f2d0c83158c4985b7e4 69 SUPERFAMILY SSF143800 20 65 1.06E-13 T 01-11-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_15530 bfb8ebdf2ff47f2d0c83158c4985b7e4 69 Gene3D G3DSA:2.30.170.50 2 68 7.5E-15 T 01-11-2018 D3790_15530 bfb8ebdf2ff47f2d0c83158c4985b7e4 69 ProSitePatterns PS01143 Ribosomal protein L31 signature. 33 54 - T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_15530 bfb8ebdf2ff47f2d0c83158c4985b7e4 69 PRINTS PR01249 Ribosomal protein L31 signature 29 44 2.4E-10 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_15530 bfb8ebdf2ff47f2d0c83158c4985b7e4 69 PRINTS PR01249 Ribosomal protein L31 signature 44 62 2.4E-10 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_15530 bfb8ebdf2ff47f2d0c83158c4985b7e4 69 TIGRFAM TIGR00105 L31: ribosomal protein bL31 29 64 1.4E-12 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_15530 bfb8ebdf2ff47f2d0c83158c4985b7e4 69 Pfam PF01197 Ribosomal protein L31 13 63 7.4E-15 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_15625 a9416e0e7988dc8fa1021e252ecc89c0 160 Gene3D G3DSA:3.40.630.10 36 109 1.2E-5 T 01-11-2018 D3790_12560 a01708db57224992aee91087d8cb1214 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 01-11-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 D3790_12560 a01708db57224992aee91087d8cb1214 317 SUPERFAMILY SSF51569 1 316 4.61E-115 T 01-11-2018 D3790_12560 a01708db57224992aee91087d8cb1214 317 Gene3D G3DSA:3.20.20.70 2 317 8.2E-147 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_12560 a01708db57224992aee91087d8cb1214 317 Hamap MF_00492 Transaldolase [tal]. 2 317 51.833 T 01-11-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 D3790_12560 a01708db57224992aee91087d8cb1214 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 2.1E-161 T 01-11-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 D3790_12560 a01708db57224992aee91087d8cb1214 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 01-11-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 D3790_12560 a01708db57224992aee91087d8cb1214 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 313 5.2E-100 T 01-11-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 D3790_15575 859af56837b600cdbfb216bc0e79f4a5 462 Gene3D G3DSA:3.40.50.300 111 291 5.3E-52 T 01-11-2018 D3790_15575 859af56837b600cdbfb216bc0e79f4a5 462 SMART SM00760 370 439 6.1E-45 T 01-11-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 D3790_15575 859af56837b600cdbfb216bc0e79f4a5 462 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 371 439 1.0E-32 T 01-11-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 D3790_15575 859af56837b600cdbfb216bc0e79f4a5 462 SUPERFAMILY SSF52540 127 338 2.49E-45 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_15575 859af56837b600cdbfb216bc0e79f4a5 462 ProSitePatterns PS01008 DnaA protein signature. 420 439 - T 01-11-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 D3790_15575 859af56837b600cdbfb216bc0e79f4a5 462 SUPERFAMILY SSF48295 358 461 3.4E-38 T 01-11-2018 IPR010921 Trp repressor/replication initiator GO:0043565 D3790_15575 859af56837b600cdbfb216bc0e79f4a5 462 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 460 5.9E-187 T 01-11-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 D3790_15575 859af56837b600cdbfb216bc0e79f4a5 462 SMART SM00382 159 361 2.3E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_15575 859af56837b600cdbfb216bc0e79f4a5 462 Gene3D G3DSA:1.10.1750.10 369 462 7.2E-40 T 01-11-2018 IPR010921 Trp repressor/replication initiator GO:0043565 D3790_15575 859af56837b600cdbfb216bc0e79f4a5 462 Gene3D G3DSA:3.30.300.180 2 105 8.6E-38 T 01-11-2018 IPR038454 DnaA, N-terminal domain superfamily D3790_15575 859af56837b600cdbfb216bc0e79f4a5 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 258 285 1.2E-54 T 01-11-2018 IPR020591 Chromosomal replication control, initiator DnaA-like D3790_15575 859af56837b600cdbfb216bc0e79f4a5 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 192 206 1.2E-54 T 01-11-2018 IPR020591 Chromosomal replication control, initiator DnaA-like D3790_15575 859af56837b600cdbfb216bc0e79f4a5 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 420 439 1.2E-54 T 01-11-2018 IPR020591 Chromosomal replication control, initiator DnaA-like D3790_15575 859af56837b600cdbfb216bc0e79f4a5 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 224 238 1.2E-54 T 01-11-2018 IPR020591 Chromosomal replication control, initiator DnaA-like D3790_15575 859af56837b600cdbfb216bc0e79f4a5 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 160 180 1.2E-54 T 01-11-2018 IPR020591 Chromosomal replication control, initiator DnaA-like D3790_15575 859af56837b600cdbfb216bc0e79f4a5 462 Pfam PF00308 Bacterial dnaA protein 128 344 1.2E-99 T 01-11-2018 IPR013317 Chromosomal replication initiator protein DnaA D3790_15575 859af56837b600cdbfb216bc0e79f4a5 462 Pfam PF11638 DnaA N-terminal domain 4 64 6.5E-20 T 01-11-2018 IPR024633 DnaA N-terminal domain D3790_15575 859af56837b600cdbfb216bc0e79f4a5 462 Gene3D G3DSA:1.10.8.60 293 363 3.4E-24 T 01-11-2018 D3790_15575 859af56837b600cdbfb216bc0e79f4a5 462 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 461 34.514 T 01-11-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 D3790_16985 beb8434ce44f0c3d078e482e85e18d42 98 Gene3D G3DSA:3.30.70.100 1 96 2.4E-37 T 01-11-2018 D3790_16985 beb8434ce44f0c3d078e482e85e18d42 98 Hamap MF_02051 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [lsrG]. 1 96 37.588 T 01-11-2018 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase GO:0016853 D3790_16985 beb8434ce44f0c3d078e482e85e18d42 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 2.1E-17 T 01-11-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain D3790_16985 beb8434ce44f0c3d078e482e85e18d42 98 SUPERFAMILY SSF54909 1 91 1.07E-24 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel D3790_15050 096c010acd1a6e9d2a5c1a245c754482 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 55 79 8.4E-5 T 01-11-2018 IPR001451 Hexapeptide repeat D3790_15050 096c010acd1a6e9d2a5c1a245c754482 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 18 53 3.7E-8 T 01-11-2018 IPR001451 Hexapeptide repeat D3790_15050 096c010acd1a6e9d2a5c1a245c754482 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 140 7.6E-6 T 01-11-2018 IPR001451 Hexapeptide repeat D3790_15050 096c010acd1a6e9d2a5c1a245c754482 196 SUPERFAMILY SSF51161 7 162 1.09E-45 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily D3790_15050 096c010acd1a6e9d2a5c1a245c754482 196 Gene3D G3DSA:2.160.10.10 6 155 3.0E-48 T 01-11-2018 D3790_15050 096c010acd1a6e9d2a5c1a245c754482 196 Gene3D G3DSA:2.20.70.110 157 194 2.5E-17 T 01-11-2018 D3790_14190 4a722341cdf2269fb0900e019a77f1f9 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.722 T 01-11-2018 IPR023036 Ribosomal protein S14, bacterial/plastid D3790_14190 4a722341cdf2269fb0900e019a77f1f9 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 5.7E-26 T 01-11-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14190 4a722341cdf2269fb0900e019a77f1f9 101 Gene3D G3DSA:4.10.830.10 41 101 1.7E-22 T 01-11-2018 D3790_14190 4a722341cdf2269fb0900e019a77f1f9 101 SUPERFAMILY SSF57716 2 101 7.06E-38 T 01-11-2018 D3790_14190 4a722341cdf2269fb0900e019a77f1f9 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 01-11-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_08845 a745c88caa43bd6555202d1cb058ae2d 295 PIRSF PIRSF000410 9 288 5.3E-98 T 01-11-2018 IPR026024 Chemotaxis protein methyltransferase CheR D3790_08845 a745c88caa43bd6555202d1cb058ae2d 295 SMART SM00138 27 288 2.8E-101 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D3790_08845 a745c88caa43bd6555202d1cb058ae2d 295 Gene3D G3DSA:1.10.155.10 14 93 3.1E-29 T 01-11-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily D3790_08845 a745c88caa43bd6555202d1cb058ae2d 295 Pfam PF03705 CheR methyltransferase, all-alpha domain 29 79 4.8E-17 T 01-11-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal D3790_08845 a745c88caa43bd6555202d1cb058ae2d 295 SUPERFAMILY SSF53335 95 285 2.03E-56 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_08845 a745c88caa43bd6555202d1cb058ae2d 295 PRINTS PR00996 Glutamate methyltransferase family signature 88 100 2.3E-47 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D3790_08845 a745c88caa43bd6555202d1cb058ae2d 295 PRINTS PR00996 Glutamate methyltransferase family signature 228 242 2.3E-47 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D3790_08845 a745c88caa43bd6555202d1cb058ae2d 295 PRINTS PR00996 Glutamate methyltransferase family signature 122 142 2.3E-47 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D3790_08845 a745c88caa43bd6555202d1cb058ae2d 295 PRINTS PR00996 Glutamate methyltransferase family signature 49 62 2.3E-47 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D3790_08845 a745c88caa43bd6555202d1cb058ae2d 295 PRINTS PR00996 Glutamate methyltransferase family signature 156 172 2.3E-47 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D3790_08845 a745c88caa43bd6555202d1cb058ae2d 295 PRINTS PR00996 Glutamate methyltransferase family signature 247 270 2.3E-47 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D3790_08845 a745c88caa43bd6555202d1cb058ae2d 295 Gene3D G3DSA:3.40.50.150 94 288 9.2E-69 T 01-11-2018 D3790_08845 a745c88caa43bd6555202d1cb058ae2d 295 SUPERFAMILY SSF47757 19 94 2.48E-23 T 01-11-2018 D3790_08845 a745c88caa43bd6555202d1cb058ae2d 295 Pfam PF01739 CheR methyltransferase, SAM binding domain 95 283 9.7E-58 T 01-11-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal D3790_08800 5d59c8b32c68fad4112872803e708661 93 Pfam PF05860 haemagglutination activity domain 28 75 4.1E-9 T 01-11-2018 IPR008638 Filamentous haemagglutinin, N-terminal D3790_08800 5d59c8b32c68fad4112872803e708661 93 SUPERFAMILY SSF51126 30 75 7.53E-9 T 01-11-2018 IPR011050 Pectin lyase fold/virulence factor D3790_08800 5d59c8b32c68fad4112872803e708661 93 Gene3D G3DSA:2.160.20.10 23 85 3.1E-13 T 01-11-2018 IPR012334 Pectin lyase fold D3790_15225 9aadf72cbddee513ecbd8aede57acd79 246 Gene3D G3DSA:2.40.160.90 103 246 7.2E-20 T 01-11-2018 D3790_15225 9aadf72cbddee513ecbd8aede57acd79 246 Pfam PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B 128 245 1.5E-8 T 01-11-2018 IPR001677 Transferrin-binding protein, C-lobe/N-lobe beta barrel domain D3790_15225 9aadf72cbddee513ecbd8aede57acd79 246 SUPERFAMILY SSF56925 102 245 1.1E-23 T 01-11-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D3790_06200 4fb982a25efb0a74a7f85ec0d9c14c80 133 Gene3D G3DSA:1.10.287.1050 1 83 6.3E-32 T 01-11-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 D3790_06200 4fb982a25efb0a74a7f85ec0d9c14c80 133 SUPERFAMILY SSF81273 2 58 5.69E-17 T 01-11-2018 D3790_06200 4fb982a25efb0a74a7f85ec0d9c14c80 133 SUPERFAMILY SSF81273 92 133 1.61E-10 T 01-11-2018 D3790_06200 4fb982a25efb0a74a7f85ec0d9c14c80 133 PIRSF PIRSF002096 1 133 7.7E-52 T 01-11-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 D3790_06200 4fb982a25efb0a74a7f85ec0d9c14c80 133 Pfam PF00816 H-NS histone family 32 125 5.6E-19 T 01-11-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 D3790_06200 4fb982a25efb0a74a7f85ec0d9c14c80 133 Gene3D G3DSA:4.10.430.10 90 133 2.2E-22 T 01-11-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 D3790_06200 4fb982a25efb0a74a7f85ec0d9c14c80 133 SMART SM00528 86 133 1.9E-23 T 01-11-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 D3790_07215 97112a3dfb07141038292ef0d35e0593 142 SUPERFAMILY SSF55811 5 127 5.96E-14 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D3790_07215 97112a3dfb07141038292ef0d35e0593 142 Pfam PF00293 NUDIX domain 8 125 8.0E-11 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D3790_07215 97112a3dfb07141038292ef0d35e0593 142 Gene3D G3DSA:3.90.79.10 3 139 4.0E-14 T 01-11-2018 D3790_07215 97112a3dfb07141038292ef0d35e0593 142 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D3790_11780 93178391fbb13def70315e8651ee8ba8 545 Gene3D G3DSA:3.40.50.300 1 285 1.3E-135 T 01-11-2018 D3790_11780 93178391fbb13def70315e8651ee8ba8 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 5.2E-61 T 01-11-2018 IPR017926 Glutamine amidotransferase D3790_11780 93178391fbb13def70315e8651ee8ba8 545 SUPERFAMILY SSF52540 3 268 3.12E-123 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_11780 93178391fbb13def70315e8651ee8ba8 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.165 T 01-11-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 D3790_11780 93178391fbb13def70315e8651ee8ba8 545 Gene3D G3DSA:3.40.50.880 286 545 1.0E-101 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_11780 93178391fbb13def70315e8651ee8ba8 545 Pfam PF06418 CTP synthase N-terminus 5 265 7.3E-127 T 01-11-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 D3790_11780 93178391fbb13def70315e8651ee8ba8 545 SUPERFAMILY SSF52317 289 541 1.19E-86 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_11780 93178391fbb13def70315e8651ee8ba8 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 1.7E-262 T 01-11-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 D3790_05530 1ffa11a1d3b535f31a0aa744adb0564f 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 200 9.9E-21 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_05530 1ffa11a1d3b535f31a0aa744adb0564f 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 9.2E-15 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_05530 1ffa11a1d3b535f31a0aa744adb0564f 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 9.2E-15 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_05530 1ffa11a1d3b535f31a0aa744adb0564f 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 9.2E-15 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_05530 1ffa11a1d3b535f31a0aa744adb0564f 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_05530 1ffa11a1d3b535f31a0aa744adb0564f 211 SMART SM00421 145 202 1.2E-20 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_05530 1ffa11a1d3b535f31a0aa744adb0564f 211 SMART SM00448 4 117 2.8E-22 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_05530 1ffa11a1d3b535f31a0aa744adb0564f 211 Gene3D G3DSA:3.40.50.12740 5 207 5.6E-54 T 01-11-2018 D3790_05530 1ffa11a1d3b535f31a0aa744adb0564f 211 SUPERFAMILY SSF46894 129 205 9.18E-21 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D3790_05530 1ffa11a1d3b535f31a0aa744adb0564f 211 Pfam PF00072 Response regulator receiver domain 6 117 1.5E-23 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_05530 1ffa11a1d3b535f31a0aa744adb0564f 211 SUPERFAMILY SSF52172 3 134 1.34E-28 T 01-11-2018 IPR011006 CheY-like superfamily D3790_05260 6f9d3416b14d1e375dce322eae31fc78 373 Pfam PF08007 Cupin superfamily protein 9 310 2.7E-101 T 01-11-2018 IPR003347 JmjC domain D3790_05260 6f9d3416b14d1e375dce322eae31fc78 373 Gene3D G3DSA:1.10.10.2510 205 373 2.8E-59 T 01-11-2018 D3790_05260 6f9d3416b14d1e375dce322eae31fc78 373 SUPERFAMILY SSF51197 6 292 8.38E-70 T 01-11-2018 D3790_05260 6f9d3416b14d1e375dce322eae31fc78 373 Gene3D G3DSA:2.60.120.650 2 204 1.1E-83 T 01-11-2018 D3790_05260 6f9d3416b14d1e375dce322eae31fc78 373 SMART SM00558 87 215 5.5E-8 T 01-11-2018 IPR003347 JmjC domain D3790_02160 0371ba9ae1114c50941454f675e77d38 97 Pfam PF03658 RnfH family Ubiquitin 4 86 1.6E-34 T 01-11-2018 IPR005346 RnfH protein D3790_02160 0371ba9ae1114c50941454f675e77d38 97 Hamap MF_00460 Protein RnfH [rnfH]. 4 94 25.791 T 01-11-2018 IPR005346 RnfH protein D3790_02160 0371ba9ae1114c50941454f675e77d38 97 Gene3D G3DSA:3.10.20.280 1 88 5.7E-34 T 01-11-2018 IPR037021 RnfH superfamily D3790_02160 0371ba9ae1114c50941454f675e77d38 97 SUPERFAMILY SSF54285 4 78 5.62E-26 T 01-11-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp D3790_17115 be0724dc7a4aaed721f61bae8c90af69 323 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 87 219 1.0E-53 T 01-11-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 D3790_08210 b022841469ba568604535169a1571ce6 137 Pfam PF03061 Thioesterase superfamily 50 127 1.5E-16 T 01-11-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 D3790_08210 b022841469ba568604535169a1571ce6 137 Gene3D G3DSA:3.10.129.10 1 137 1.0E-60 T 01-11-2018 D3790_08210 b022841469ba568604535169a1571ce6 137 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 1.3E-45 T 01-11-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 D3790_08210 b022841469ba568604535169a1571ce6 137 SUPERFAMILY SSF54637 3 136 4.58E-31 T 01-11-2018 IPR029069 HotDog domain superfamily D3790_13270 3e7d738652fd25d6a77223385b55668f 638 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 42 631 3.6E-181 T 01-11-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 D3790_13270 3e7d738652fd25d6a77223385b55668f 638 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 41 631 3.1E-199 T 01-11-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 D3790_13270 3e7d738652fd25d6a77223385b55668f 638 Gene3D G3DSA:3.20.70.20 47 613 4.0E-230 T 01-11-2018 D3790_13270 3e7d738652fd25d6a77223385b55668f 638 ProSitePatterns PS00850 Glycine radical domain signature. 602 610 - T 01-11-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site D3790_13270 3e7d738652fd25d6a77223385b55668f 638 SUPERFAMILY SSF51998 47 613 3.34E-192 T 01-11-2018 D3790_04575 3118c0cfc204a809d69fb9848f141f9a 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 5.1E-42 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D3790_04575 3118c0cfc204a809d69fb9848f141f9a 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 5.1E-42 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D3790_04575 3118c0cfc204a809d69fb9848f141f9a 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 5.1E-42 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D3790_04575 3118c0cfc204a809d69fb9848f141f9a 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 5.1E-42 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D3790_04575 3118c0cfc204a809d69fb9848f141f9a 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 5.1E-42 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D3790_04575 3118c0cfc204a809d69fb9848f141f9a 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 5.1E-42 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D3790_04575 3118c0cfc204a809d69fb9848f141f9a 763 Gene3D G3DSA:3.20.70.20 78 741 3.2E-157 T 01-11-2018 D3790_04575 3118c0cfc204a809d69fb9848f141f9a 763 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 4.4E-120 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D3790_04575 3118c0cfc204a809d69fb9848f141f9a 763 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D3790_04575 3118c0cfc204a809d69fb9848f141f9a 763 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 3.8E-180 T 01-11-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D3790_04575 3118c0cfc204a809d69fb9848f141f9a 763 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 1.5E-12 T 01-11-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D3790_04575 3118c0cfc204a809d69fb9848f141f9a 763 SUPERFAMILY SSF51998 222 741 7.32E-170 T 01-11-2018 D3790_04575 3118c0cfc204a809d69fb9848f141f9a 763 Pfam PF03477 ATP cone domain 6 92 3.6E-16 T 01-11-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 D3790_04575 3118c0cfc204a809d69fb9848f141f9a 763 SUPERFAMILY SSF48168 10 221 9.94E-73 T 01-11-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D3790_12495 6cd4922b92476ae02e91b1c38b273395 177 Gene3D G3DSA:3.30.420.470 5 168 9.6E-12 T 01-11-2018 D3790_12495 6cd4922b92476ae02e91b1c38b273395 177 Pfam PF13358 DDE superfamily endonuclease 14 148 4.2E-32 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_06545 6cd4922b92476ae02e91b1c38b273395 177 Gene3D G3DSA:3.30.420.470 5 168 9.6E-12 T 01-11-2018 D3790_06545 6cd4922b92476ae02e91b1c38b273395 177 Pfam PF13358 DDE superfamily endonuclease 14 148 4.2E-32 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_12385 c39678489df31fd5a9c6e6e410a74533 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 79 2.0E-34 T 01-11-2018 IPR010398 Protein of unknown function DUF997 D3790_12385 c39678489df31fd5a9c6e6e410a74533 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 4.1E-29 T 01-11-2018 IPR010398 Protein of unknown function DUF997 D3790_11685 b9e95f19e551a90f929659ed5c79b3ab 263 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 257 1.5E-102 T 01-11-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 D3790_11685 b9e95f19e551a90f929659ed5c79b3ab 263 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 2 263 2.8E-113 T 01-11-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 D3790_11685 b9e95f19e551a90f929659ed5c79b3ab 263 SUPERFAMILY SSF51621 4 262 4.55E-100 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D3790_11685 b9e95f19e551a90f929659ed5c79b3ab 263 Gene3D G3DSA:3.20.20.60 1 262 5.8E-102 T 01-11-2018 D3790_11685 b9e95f19e551a90f929659ed5c79b3ab 263 PIRSF PIRSF000388 1 263 1.1E-94 T 01-11-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 D3790_11685 b9e95f19e551a90f929659ed5c79b3ab 263 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 262 40.41 T 01-11-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 D3790_03785 92ec1aa7203a3253cabd5126c738b17f 499 Gene3D G3DSA:3.40.50.300 1 245 2.8E-32 T 01-11-2018 D3790_03785 92ec1aa7203a3253cabd5126c738b17f 499 Pfam PF00005 ABC transporter 23 163 2.7E-17 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_03785 92ec1aa7203a3253cabd5126c738b17f 499 SUPERFAMILY SSF52540 255 486 1.81E-41 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_03785 92ec1aa7203a3253cabd5126c738b17f 499 Gene3D G3DSA:3.40.50.300 246 496 2.8E-50 T 01-11-2018 D3790_03785 92ec1aa7203a3253cabd5126c738b17f 499 SMART SM00382 28 219 5.8E-6 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_03785 92ec1aa7203a3253cabd5126c738b17f 499 SMART SM00382 285 480 6.0E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_03785 92ec1aa7203a3253cabd5126c738b17f 499 Pfam PF00005 ABC transporter 276 429 1.2E-25 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_03785 92ec1aa7203a3253cabd5126c738b17f 499 SUPERFAMILY SSF52540 4 226 7.75E-35 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_01895 0bfa932b3cf52a783b2c53789d77ab0d 428 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 14 400 9.6E-25 T 01-11-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 D3790_01895 0bfa932b3cf52a783b2c53789d77ab0d 428 Gene3D G3DSA:1.10.4160.10 11 426 1.9E-44 T 01-11-2018 IPR038271 Purine-cytosine permease superfamily D3790_03225 b9762f75991b5739916cd9b03a0c9128 370 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 11 366 29.256 T 01-11-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_03225 b9762f75991b5739916cd9b03a0c9128 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 01-11-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_03225 b9762f75991b5739916cd9b03a0c9128 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 7.3E-139 T 01-11-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_03225 b9762f75991b5739916cd9b03a0c9128 370 Pfam PF01098 Cell cycle protein 21 364 2.5E-123 T 01-11-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_16295 a351b14601210f409c0813bf0ef52792 770 Pfam PF07670 Nucleoside recognition 513 690 3.5E-37 T 01-11-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 D3790_16295 a351b14601210f409c0813bf0ef52792 770 Pfam PF07670 Nucleoside recognition 354 444 9.9E-13 T 01-11-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 D3790_16295 a351b14601210f409c0813bf0ef52792 770 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 688 1.6E-223 T 01-11-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 D3790_16295 a351b14601210f409c0813bf0ef52792 770 Gene3D G3DSA:3.40.50.300 1 171 1.0E-46 T 01-11-2018 D3790_16295 a351b14601210f409c0813bf0ef52792 770 Pfam PF02421 Ferrous iron transport protein B 5 163 1.3E-63 T 01-11-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 D3790_16295 a351b14601210f409c0813bf0ef52792 770 Pfam PF07664 Ferrous iron transport protein B C terminus 456 508 1.8E-21 T 01-11-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 D3790_16295 a351b14601210f409c0813bf0ef52792 770 SUPERFAMILY SSF52540 4 165 2.76E-39 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_07455 6c18f88e47d582ccdf0d70d64a79e50a 589 Gene3D G3DSA:3.30.1360.30 271 420 1.8E-199 T 01-11-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 D3790_07455 6c18f88e47d582ccdf0d70d64a79e50a 589 SUPERFAMILY SSF55261 288 419 1.42E-46 T 01-11-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 D3790_07455 6c18f88e47d582ccdf0d70d64a79e50a 589 SUPERFAMILY SSF55681 108 584 1.57E-104 T 01-11-2018 D3790_07455 6c18f88e47d582ccdf0d70d64a79e50a 589 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.719 T 01-11-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 D3790_07455 6c18f88e47d582ccdf0d70d64a79e50a 589 Pfam PF02938 GAD domain 307 406 1.1E-32 T 01-11-2018 IPR029351 GAD domain Reactome: R-HSA-379726 D3790_07455 6c18f88e47d582ccdf0d70d64a79e50a 589 Gene3D G3DSA:3.30.930.10 118 578 1.8E-199 T 01-11-2018 D3790_07455 6c18f88e47d582ccdf0d70d64a79e50a 589 Pfam PF01336 OB-fold nucleic acid binding domain 18 100 6.3E-17 T 01-11-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 D3790_07455 6c18f88e47d582ccdf0d70d64a79e50a 589 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 586 1.0E-274 T 01-11-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 D3790_07455 6c18f88e47d582ccdf0d70d64a79e50a 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 4.8E-26 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_07455 6c18f88e47d582ccdf0d70d64a79e50a 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 4.8E-26 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_07455 6c18f88e47d582ccdf0d70d64a79e50a 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 4.8E-26 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_07455 6c18f88e47d582ccdf0d70d64a79e50a 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 4.8E-26 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_07455 6c18f88e47d582ccdf0d70d64a79e50a 589 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 2.3E-108 T 01-11-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_07455 6c18f88e47d582ccdf0d70d64a79e50a 589 SUPERFAMILY SSF50249 1 105 1.24E-33 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_07455 6c18f88e47d582ccdf0d70d64a79e50a 589 Gene3D G3DSA:2.40.50.140 1 106 2.1E-35 T 01-11-2018 D3790_10985 b38e74b139c61824f5a14c0296ad1b3f 584 Pfam PF00905 Penicillin binding protein transpeptidase domain 259 559 2.5E-80 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 D3790_10985 b38e74b139c61824f5a14c0296ad1b3f 584 Gene3D G3DSA:3.30.450.330 236 555 2.2E-104 T 01-11-2018 D3790_10985 b38e74b139c61824f5a14c0296ad1b3f 584 Gene3D G3DSA:3.90.1310.30 58 234 1.2E-40 T 01-11-2018 D3790_10985 b38e74b139c61824f5a14c0296ad1b3f 584 SUPERFAMILY SSF56601 234 574 9.68E-85 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like D3790_10985 b38e74b139c61824f5a14c0296ad1b3f 584 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 219 4.1E-18 T 01-11-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 D3790_10985 b38e74b139c61824f5a14c0296ad1b3f 584 SUPERFAMILY SSF56519 62 233 2.22E-42 T 01-11-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 D3790_10985 b38e74b139c61824f5a14c0296ad1b3f 584 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 18 575 45.795 T 01-11-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D3790_10985 b38e74b139c61824f5a14c0296ad1b3f 584 Gene3D G3DSA:3.40.710.10 295 480 2.2E-104 T 01-11-2018 D3790_06795 b2da6a3c3568cc5f8b3d6632bcd1d7e4 344 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 314 2.6E-43 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D3790_06795 b2da6a3c3568cc5f8b3d6632bcd1d7e4 344 SUPERFAMILY SSF51905 1 332 1.83E-26 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_06795 b2da6a3c3568cc5f8b3d6632bcd1d7e4 344 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.5E-15 T 01-11-2018 D3790_06795 b2da6a3c3568cc5f8b3d6632bcd1d7e4 344 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 2.5E-15 T 01-11-2018 D3790_06795 b2da6a3c3568cc5f8b3d6632bcd1d7e4 344 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 294 2.5E-15 T 01-11-2018 D3790_06795 b2da6a3c3568cc5f8b3d6632bcd1d7e4 344 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 2.5E-15 T 01-11-2018 D3790_06795 b2da6a3c3568cc5f8b3d6632bcd1d7e4 344 Gene3D G3DSA:3.50.50.100 2 335 9.7E-65 T 01-11-2018 D3790_06795 b2da6a3c3568cc5f8b3d6632bcd1d7e4 344 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 7.9E-8 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D3790_06795 b2da6a3c3568cc5f8b3d6632bcd1d7e4 344 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 7.9E-8 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D3790_06795 b2da6a3c3568cc5f8b3d6632bcd1d7e4 344 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 282 300 7.9E-8 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D3790_16025 c8be3567483057780f78c4361d4163d7 911 SUPERFAMILY SSF52540 180 511 2.76E-69 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16025 c8be3567483057780f78c4361d4163d7 911 Gene3D G3DSA:3.40.50.300 171 362 6.7E-60 T 01-11-2018 D3790_16025 c8be3567483057780f78c4361d4163d7 911 Pfam PF07724 AAA domain (Cdc48 subfamily) 646 807 1.4E-38 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D3790_16025 c8be3567483057780f78c4361d4163d7 911 Gene3D G3DSA:1.10.8.60 813 910 7.6E-9 T 01-11-2018 D3790_16025 c8be3567483057780f78c4361d4163d7 911 SMART SM01086 813 898 6.4E-7 T 01-11-2018 IPR019489 Clp ATPase, C-terminal D3790_16025 c8be3567483057780f78c4361d4163d7 911 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 813 886 6.4E-11 T 01-11-2018 IPR019489 Clp ATPase, C-terminal D3790_16025 c8be3567483057780f78c4361d4163d7 911 SUPERFAMILY SSF81923 11 123 1.02E-12 T 01-11-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 D3790_16025 c8be3567483057780f78c4361d4163d7 911 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 897 0.0 T 01-11-2018 IPR017729 Type VI secretion system, ATPase ClpV1 D3790_16025 c8be3567483057780f78c4361d4163d7 911 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 681 699 - T 01-11-2018 IPR028299 ClpA/B, conserved site 2 D3790_16025 c8be3567483057780f78c4361d4163d7 911 Gene3D G3DSA:1.10.1780.10 5 159 3.6E-35 T 01-11-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 D3790_16025 c8be3567483057780f78c4361d4163d7 911 SMART SM00382 218 364 6.6E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_16025 c8be3567483057780f78c4361d4163d7 911 SMART SM00382 647 813 1.1E-6 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_16025 c8be3567483057780f78c4361d4163d7 911 Gene3D G3DSA:3.40.50.300 600 811 1.1E-61 T 01-11-2018 D3790_16025 c8be3567483057780f78c4361d4163d7 911 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 314 326 - T 01-11-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 D3790_16025 c8be3567483057780f78c4361d4163d7 911 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 223 334 2.5E-8 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D3790_16025 c8be3567483057780f78c4361d4163d7 911 Gene3D G3DSA:3.40.50.300 363 594 7.3E-43 T 01-11-2018 D3790_16025 c8be3567483057780f78c4361d4163d7 911 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 651 669 2.7E-29 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 D3790_16025 c8be3567483057780f78c4361d4163d7 911 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 725 743 2.7E-29 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 D3790_16025 c8be3567483057780f78c4361d4163d7 911 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 758 772 2.7E-29 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 D3790_16025 c8be3567483057780f78c4361d4163d7 911 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 696 714 2.7E-29 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 D3790_16025 c8be3567483057780f78c4361d4163d7 911 SUPERFAMILY SSF52540 596 878 1.02E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_11365 12dac8d7ef565f05b5f0b16c11d435f9 156 Gene3D G3DSA:1.10.10.10 3 54 9.5E-22 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_11365 12dac8d7ef565f05b5f0b16c11d435f9 156 SUPERFAMILY SSF46785 1 61 1.48E-15 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_11365 12dac8d7ef565f05b5f0b16c11d435f9 156 SMART SM00344 2 111 2.9E-40 T 01-11-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 D3790_11365 12dac8d7ef565f05b5f0b16c11d435f9 156 SUPERFAMILY SSF54909 62 151 2.82E-21 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel D3790_11365 12dac8d7ef565f05b5f0b16c11d435f9 156 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 4.3E-21 T 01-11-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain D3790_11365 12dac8d7ef565f05b5f0b16c11d435f9 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 6.3E-11 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 D3790_11365 12dac8d7ef565f05b5f0b16c11d435f9 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 6.3E-11 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 D3790_11365 12dac8d7ef565f05b5f0b16c11d435f9 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 6.3E-11 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 D3790_11365 12dac8d7ef565f05b5f0b16c11d435f9 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 48 1.6E-17 T 01-11-2018 D3790_11365 12dac8d7ef565f05b5f0b16c11d435f9 156 Gene3D G3DSA:3.30.70.920 55 139 4.8E-23 T 01-11-2018 D3790_11550 7c1735482aaec114d32e87fb7f5fb744 292 Pfam PF14559 Tetratricopeptide repeat 132 196 4.6E-18 T 01-11-2018 D3790_11550 7c1735482aaec114d32e87fb7f5fb744 292 SUPERFAMILY SSF48452 130 246 5.24E-8 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_11550 7c1735482aaec114d32e87fb7f5fb744 292 SUPERFAMILY SSF52833 12 118 4.81E-22 T 01-11-2018 IPR036249 Thioredoxin-like superfamily D3790_11550 7c1735482aaec114d32e87fb7f5fb744 292 Gene3D G3DSA:1.25.40.10 124 204 7.8E-21 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_11550 7c1735482aaec114d32e87fb7f5fb744 292 Pfam PF00085 Thioredoxin 21 113 3.6E-14 T 01-11-2018 IPR013766 Thioredoxin domain GO:0045454 D3790_11550 7c1735482aaec114d32e87fb7f5fb744 292 Gene3D G3DSA:1.25.40.10 205 292 6.2E-23 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_11550 7c1735482aaec114d32e87fb7f5fb744 292 Gene3D G3DSA:3.40.30.10 7 119 3.4E-22 T 01-11-2018 D3790_11550 7c1735482aaec114d32e87fb7f5fb744 292 Pfam PF14561 Tetratricopeptide repeat 204 292 8.9E-28 T 01-11-2018 D3790_15980 52205011aeceea2b367ccee38ee2c95b 165 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 159 7.0E-56 T 01-11-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 D3790_15980 52205011aeceea2b367ccee38ee2c95b 165 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 160 2.6E-55 T 01-11-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 D3790_15980 52205011aeceea2b367ccee38ee2c95b 165 PIRSF PIRSF028301 1 165 2.8E-61 T 01-11-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 D3790_13865 c09f58e411cd036cf37fee6345cce619 455 PIRSF PIRSF006060 1 453 3.6E-61 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D3790_13865 c09f58e411cd036cf37fee6345cce619 455 Pfam PF00324 Amino acid permease 16 430 3.5E-100 T 01-11-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 D3790_13865 c09f58e411cd036cf37fee6345cce619 455 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 01-11-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 D3790_13865 c09f58e411cd036cf37fee6345cce619 455 Gene3D G3DSA:1.20.1740.10 8 454 5.9E-54 T 01-11-2018 D3790_19380 bab1104ebf9abb9dbfb3e0be4d7fa999 252 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 60 5.3E-19 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_19380 bab1104ebf9abb9dbfb3e0be4d7fa999 252 Gene3D G3DSA:3.40.190.10 89 159 1.7E-46 T 01-11-2018 D3790_19380 bab1104ebf9abb9dbfb3e0be4d7fa999 252 Gene3D G3DSA:3.40.190.10 160 239 1.7E-46 T 01-11-2018 D3790_19380 bab1104ebf9abb9dbfb3e0be4d7fa999 252 SUPERFAMILY SSF46785 2 85 5.45E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_19380 bab1104ebf9abb9dbfb3e0be4d7fa999 252 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 48 3.0E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_19380 bab1104ebf9abb9dbfb3e0be4d7fa999 252 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 37 3.0E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_19380 bab1104ebf9abb9dbfb3e0be4d7fa999 252 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 16 27 3.0E-5 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_19380 bab1104ebf9abb9dbfb3e0be4d7fa999 252 Gene3D G3DSA:1.10.10.10 1 88 3.1E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_19380 bab1104ebf9abb9dbfb3e0be4d7fa999 252 Pfam PF03466 LysR substrate binding domain 85 240 3.1E-31 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_19380 bab1104ebf9abb9dbfb3e0be4d7fa999 252 SUPERFAMILY SSF53850 86 239 3.26E-32 T 01-11-2018 D3790_16890 7cca44df81fa6ea1712b5525775c0cc5 146 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.8E-17 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_16890 7cca44df81fa6ea1712b5525775c0cc5 146 SUPERFAMILY SSF46785 1 82 7.0E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_16890 7cca44df81fa6ea1712b5525775c0cc5 146 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_16890 7cca44df81fa6ea1712b5525775c0cc5 146 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_16890 7cca44df81fa6ea1712b5525775c0cc5 146 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_16890 7cca44df81fa6ea1712b5525775c0cc5 146 Gene3D G3DSA:1.10.10.10 1 83 2.8E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_07100 c950f1a7c5dc783d47c64214577f1ee1 1560 Gene3D G3DSA:3.40.50.12780 543 937 4.8E-130 T 01-11-2018 D3790_07100 c950f1a7c5dc783d47c64214577f1ee1 1560 Gene3D G3DSA:3.40.50.150 1040 1223 3.8E-31 T 01-11-2018 D3790_07100 c950f1a7c5dc783d47c64214577f1ee1 1560 SUPERFAMILY SSF47336 1459 1532 6.15E-19 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07100 c950f1a7c5dc783d47c64214577f1ee1 1560 SUPERFAMILY SSF52777 81 258 3.11E-46 T 01-11-2018 D3790_07100 c950f1a7c5dc783d47c64214577f1ee1 1560 Gene3D G3DSA:3.30.559.10 80 452 2.2E-138 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07100 c950f1a7c5dc783d47c64214577f1ee1 1560 SUPERFAMILY SSF53335 1036 1228 3.92E-25 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_07100 c950f1a7c5dc783d47c64214577f1ee1 1560 Pfam PF00668 Condensation domain 77 502 2.3E-99 T 01-11-2018 IPR001242 Condensation domain D3790_07100 c950f1a7c5dc783d47c64214577f1ee1 1560 ProSitePatterns PS00455 Putative AMP-binding domain signature. 697 708 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07100 c950f1a7c5dc783d47c64214577f1ee1 1560 Gene3D G3DSA:3.30.559.30 262 503 2.2E-138 T 01-11-2018 D3790_07100 c950f1a7c5dc783d47c64214577f1ee1 1560 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1491 1506 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_07100 c950f1a7c5dc783d47c64214577f1ee1 1560 Gene3D G3DSA:3.30.300.30 1361 1455 1.5E-11 T 01-11-2018 D3790_07100 c950f1a7c5dc783d47c64214577f1ee1 1560 Pfam PF00501 AMP-binding enzyme 550 944 4.7E-100 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07100 c950f1a7c5dc783d47c64214577f1ee1 1560 SUPERFAMILY SSF56801 513 1480 2.49E-149 T 01-11-2018 D3790_07100 c950f1a7c5dc783d47c64214577f1ee1 1560 SUPERFAMILY SSF52777 266 506 1.33E-58 T 01-11-2018 D3790_07100 c950f1a7c5dc783d47c64214577f1ee1 1560 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 571 968 1.9E-123 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_07100 c950f1a7c5dc783d47c64214577f1ee1 1560 Gene3D G3DSA:3.30.300.30 938 1026 2.8E-13 T 01-11-2018 D3790_07100 c950f1a7c5dc783d47c64214577f1ee1 1560 Gene3D G3DSA:1.10.1200.10 1456 1535 3.7E-25 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07100 c950f1a7c5dc783d47c64214577f1ee1 1560 Pfam PF13847 Methyltransferase domain 1068 1188 4.0E-12 T 01-11-2018 IPR025714 Methyltransferase domain D3790_07100 c950f1a7c5dc783d47c64214577f1ee1 1560 Pfam PF00550 Phosphopantetheine attachment site 1470 1530 5.7E-13 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_15965 dc68b5c03ea3cf7f187c570988a68873 1470 Gene3D G3DSA:2.160.20.10 36 327 1.4E-78 T 01-11-2018 IPR012334 Pectin lyase fold D3790_15965 dc68b5c03ea3cf7f187c570988a68873 1470 Pfam PF13332 Haemagluttinin repeat 1028 1191 8.6E-27 T 01-11-2018 IPR025157 Hemagglutinin repeat D3790_15965 dc68b5c03ea3cf7f187c570988a68873 1470 Pfam PF13332 Haemagluttinin repeat 407 537 7.8E-7 T 01-11-2018 IPR025157 Hemagglutinin repeat D3790_15965 dc68b5c03ea3cf7f187c570988a68873 1470 Pfam PF13332 Haemagluttinin repeat 637 796 8.1E-12 T 01-11-2018 IPR025157 Hemagglutinin repeat D3790_15965 dc68b5c03ea3cf7f187c570988a68873 1470 Pfam PF13332 Haemagluttinin repeat 559 625 0.0071 T 01-11-2018 IPR025157 Hemagglutinin repeat D3790_15965 dc68b5c03ea3cf7f187c570988a68873 1470 Pfam PF13332 Haemagluttinin repeat 1230 1296 4.8E-13 T 01-11-2018 IPR025157 Hemagglutinin repeat D3790_15965 dc68b5c03ea3cf7f187c570988a68873 1470 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 67 159 3.3E-17 T 01-11-2018 IPR008638 Filamentous haemagglutinin, N-terminal D3790_15965 dc68b5c03ea3cf7f187c570988a68873 1470 Pfam PF05860 haemagglutination activity domain 35 167 6.5E-30 T 01-11-2018 IPR008638 Filamentous haemagglutinin, N-terminal D3790_15965 dc68b5c03ea3cf7f187c570988a68873 1470 SUPERFAMILY SSF51126 40 317 2.48E-54 T 01-11-2018 IPR011050 Pectin lyase fold/virulence factor D3790_15965 dc68b5c03ea3cf7f187c570988a68873 1470 Pfam PF05594 Haemagluttinin repeat 218 313 8.8E-5 T 01-11-2018 IPR008619 Filamentous haemagglutinin repeat D3790_15965 dc68b5c03ea3cf7f187c570988a68873 1470 SMART SM00912 49 169 2.1E-42 T 01-11-2018 IPR008638 Filamentous haemagglutinin, N-terminal D3790_19070 f8b518f9c0fa137bfb3bb2b920d062b6 459 Pfam PF00324 Amino acid permease 16 452 4.9E-109 T 01-11-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 D3790_19070 f8b518f9c0fa137bfb3bb2b920d062b6 459 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 01-11-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 D3790_19070 f8b518f9c0fa137bfb3bb2b920d062b6 459 PIRSF PIRSF006060 1 459 5.7E-78 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D3790_19070 f8b518f9c0fa137bfb3bb2b920d062b6 459 Gene3D G3DSA:1.20.1740.10 7 458 1.1E-70 T 01-11-2018 D3790_12335 406ca22710857f150b8d80f458e77f8b 1272 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1269 0.0 T 01-11-2018 IPR011836 Conserved hypothetical protein CHP02099 D3790_12335 406ca22710857f150b8d80f458e77f8b 1272 Pfam PF13502 AsmA-like C-terminal region 1015 1258 7.5E-63 T 01-11-2018 IPR032712 AsmA-like, C-terminal D3790_12335 406ca22710857f150b8d80f458e77f8b 1272 Pfam PF13116 Protein of unknown function 503 780 1.2E-101 T 01-11-2018 IPR025263 Domain of unknown function DUF3971 D3790_07615 71a15cd106a0e4f1923fe95cd4cca6c1 286 SUPERFAMILY SSF53335 3 277 3.82E-60 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_07615 71a15cd106a0e4f1923fe95cd4cca6c1 286 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 279 43.959 T 01-11-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 D3790_07615 71a15cd106a0e4f1923fe95cd4cca6c1 286 Gene3D G3DSA:3.40.50.150 85 280 8.2E-62 T 01-11-2018 D3790_07615 71a15cd106a0e4f1923fe95cd4cca6c1 286 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 281 9.3E-90 T 01-11-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 D3790_07615 71a15cd106a0e4f1923fe95cd4cca6c1 286 Pfam PF13847 Methyltransferase domain 108 244 1.9E-22 T 01-11-2018 IPR025714 Methyltransferase domain D3790_07615 71a15cd106a0e4f1923fe95cd4cca6c1 286 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 184 190 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D3790_07615 71a15cd106a0e4f1923fe95cd4cca6c1 286 Gene3D G3DSA:1.10.8.10 1 84 3.9E-25 T 01-11-2018 D3790_07615 71a15cd106a0e4f1923fe95cd4cca6c1 286 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 275 4.0E-90 T 01-11-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 D3790_11040 d9e2763cc4cad7ae6b44c194cdbdedc0 389 SUPERFAMILY SSF53659 19 376 1.98E-123 T 01-11-2018 D3790_11040 d9e2763cc4cad7ae6b44c194cdbdedc0 389 SMART SM01329 22 371 3.3E-197 T 01-11-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 D3790_11040 d9e2763cc4cad7ae6b44c194cdbdedc0 389 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 22 370 3.1E-167 T 01-11-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 D3790_11040 d9e2763cc4cad7ae6b44c194cdbdedc0 389 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 263 282 - T 01-11-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 D3790_11040 d9e2763cc4cad7ae6b44c194cdbdedc0 389 Gene3D G3DSA:3.40.718.10 17 379 8.5E-156 T 01-11-2018 D3790_11040 d9e2763cc4cad7ae6b44c194cdbdedc0 389 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 21 375 51.382 T 01-11-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 D3790_11040 d9e2763cc4cad7ae6b44c194cdbdedc0 389 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 22 371 2.3E-136 T 01-11-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 D3790_03165 8c4aca64f60ed32cf7c2465c5f12b09d 171 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 01-11-2018 IPR023187 Transcriptional regulator MarR-type, conserved site D3790_03165 8c4aca64f60ed32cf7c2465c5f12b09d 171 Gene3D G3DSA:1.10.10.10 13 164 1.5E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_03165 8c4aca64f60ed32cf7c2465c5f12b09d 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 1.3E-22 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_03165 8c4aca64f60ed32cf7c2465c5f12b09d 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 1.3E-22 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_03165 8c4aca64f60ed32cf7c2465c5f12b09d 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 1.3E-22 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_03165 8c4aca64f60ed32cf7c2465c5f12b09d 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 1.3E-22 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_03165 8c4aca64f60ed32cf7c2465c5f12b09d 171 Pfam PF01047 MarR family 53 112 8.4E-15 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_03165 8c4aca64f60ed32cf7c2465c5f12b09d 171 SMART SM00347 46 148 5.4E-28 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_03165 8c4aca64f60ed32cf7c2465c5f12b09d 171 SUPERFAMILY SSF46785 24 165 2.52E-28 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_19590 fc9d435d08b4c4f2e24367d8d002ba96 256 Gene3D G3DSA:3.40.50.300 1 254 1.2E-68 T 01-11-2018 D3790_19590 fc9d435d08b4c4f2e24367d8d002ba96 256 SMART SM00382 27 214 3.0E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_19590 fc9d435d08b4c4f2e24367d8d002ba96 256 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_19590 fc9d435d08b4c4f2e24367d8d002ba96 256 SUPERFAMILY SSF52540 3 227 8.98E-63 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_19590 fc9d435d08b4c4f2e24367d8d002ba96 256 Pfam PF00005 ABC transporter 18 166 1.0E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_18025 17fe47dcc1d66a6ddcf1592fae6d7dd2 258 PIRSF PIRSF006157 1 258 2.3E-80 T 01-11-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 D3790_18025 17fe47dcc1d66a6ddcf1592fae6d7dd2 258 SUPERFAMILY SSF53213 5 257 1.57E-80 T 01-11-2018 D3790_18025 17fe47dcc1d66a6ddcf1592fae6d7dd2 258 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 31 234 1.2E-25 T 01-11-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 D3790_18025 17fe47dcc1d66a6ddcf1592fae6d7dd2 258 Gene3D G3DSA:3.40.830.10 2 258 4.1E-82 T 01-11-2018 D3790_18300 bbbf5b1f4241acd3e63e1ae86313480e 608 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_18300 bbbf5b1f4241acd3e63e1ae86313480e 608 SMART SM00382 372 557 5.1E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_18300 bbbf5b1f4241acd3e63e1ae86313480e 608 SUPERFAMILY SSF52540 357 570 2.08E-62 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_18300 bbbf5b1f4241acd3e63e1ae86313480e 608 Gene3D G3DSA:3.40.50.300 352 602 9.1E-67 T 01-11-2018 D3790_18300 bbbf5b1f4241acd3e63e1ae86313480e 608 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 20 572 1.6E-235 T 01-11-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 D3790_18300 bbbf5b1f4241acd3e63e1ae86313480e 608 Pfam PF00664 ABC transporter transmembrane region 26 281 3.2E-11 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D3790_18300 bbbf5b1f4241acd3e63e1ae86313480e 608 SUPERFAMILY SSF90123 14 318 2.75E-44 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_18300 bbbf5b1f4241acd3e63e1ae86313480e 608 Pfam PF00005 ABC transporter 363 510 8.8E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_18300 bbbf5b1f4241acd3e63e1ae86313480e 608 Gene3D G3DSA:1.20.1560.10 11 320 4.1E-37 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_00685 8400bc05762752cf8c1030eae4679109 407 Pfam PF13730 Helix-turn-helix domain 55 115 3.5E-10 T 01-11-2018 D3790_00080 04c885c7524e41b5529f5ac34634f0ca 443 SUPERFAMILY SSF53955 103 252 1.89E-43 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily D3790_00080 04c885c7524e41b5529f5ac34634f0ca 443 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 124 152 - T 01-11-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 D3790_00080 04c885c7524e41b5529f5ac34634f0ca 443 Gene3D G3DSA:1.10.530.10 100 252 9.9E-35 T 01-11-2018 D3790_00080 04c885c7524e41b5529f5ac34634f0ca 443 Pfam PF01476 LysM domain 348 390 3.6E-14 T 01-11-2018 IPR018392 LysM domain D3790_00080 04c885c7524e41b5529f5ac34634f0ca 443 Pfam PF01476 LysM domain 398 428 1.6E-9 T 01-11-2018 IPR018392 LysM domain D3790_00080 04c885c7524e41b5529f5ac34634f0ca 443 SUPERFAMILY SSF54106 395 441 7.98E-9 T 01-11-2018 D3790_00080 04c885c7524e41b5529f5ac34634f0ca 443 Gene3D G3DSA:3.10.350.10 395 442 1.5E-11 T 01-11-2018 IPR036779 LysM domain superfamily D3790_00080 04c885c7524e41b5529f5ac34634f0ca 443 Pfam PF01464 Transglycosylase SLT domain 107 217 5.0E-27 T 01-11-2018 IPR008258 Transglycosylase SLT domain 1 D3790_00080 04c885c7524e41b5529f5ac34634f0ca 443 Gene3D G3DSA:3.10.350.10 345 391 1.2E-15 T 01-11-2018 IPR036779 LysM domain superfamily D3790_00080 04c885c7524e41b5529f5ac34634f0ca 443 SUPERFAMILY SSF54106 347 390 3.27E-10 T 01-11-2018 D3790_00080 04c885c7524e41b5529f5ac34634f0ca 443 SMART SM00257 397 441 2.3E-8 T 01-11-2018 IPR018392 LysM domain D3790_00080 04c885c7524e41b5529f5ac34634f0ca 443 SMART SM00257 347 391 1.5E-15 T 01-11-2018 IPR018392 LysM domain D3790_06460 5ea3c8bd5a39ea74ae57d105af04bcf7 348 Gene3D G3DSA:3.40.1750.20 201 265 1.2E-44 T 01-11-2018 D3790_06460 5ea3c8bd5a39ea74ae57d105af04bcf7 348 Pfam PF08496 Peptidase family S49 N-terminal 2 157 6.1E-58 T 01-11-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 D3790_06460 5ea3c8bd5a39ea74ae57d105af04bcf7 348 SUPERFAMILY SSF52096 99 296 3.08E-31 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily D3790_06460 5ea3c8bd5a39ea74ae57d105af04bcf7 348 Pfam PF01343 Peptidase family S49 160 300 2.3E-44 T 01-11-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 D3790_06460 5ea3c8bd5a39ea74ae57d105af04bcf7 348 Gene3D G3DSA:3.90.226.10 107 300 1.2E-44 T 01-11-2018 D3790_14590 7a741a7debba8b8ee65cd2ab629db066 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 2.0E-96 T 01-11-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_14590 7a741a7debba8b8ee65cd2ab629db066 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 61.745 T 01-11-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_14590 7a741a7debba8b8ee65cd2ab629db066 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 01-11-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_14590 7a741a7debba8b8ee65cd2ab629db066 255 SUPERFAMILY SSF51351 1 250 1.44E-90 T 01-11-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_14590 7a741a7debba8b8ee65cd2ab629db066 255 Gene3D G3DSA:3.20.20.70 1 255 6.6E-103 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_14590 7a741a7debba8b8ee65cd2ab629db066 255 Pfam PF00121 Triosephosphate isomerase 5 246 3.1E-92 T 01-11-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_14130 3f650f30b8b8a1057c7f972e54f4b113 329 Gene3D G3DSA:3.30.1360.10 17 228 8.4E-86 T 01-11-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_14130 3f650f30b8b8a1057c7f972e54f4b113 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 7.5E-24 T 01-11-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_14130 3f650f30b8b8a1057c7f972e54f4b113 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.558 T 01-11-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_14130 3f650f30b8b8a1057c7f972e54f4b113 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 01-11-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_14130 3f650f30b8b8a1057c7f972e54f4b113 329 SUPERFAMILY SSF55257 6 231 1.57E-30 T 01-11-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_14130 3f650f30b8b8a1057c7f972e54f4b113 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 01-11-2018 D3790_14130 3f650f30b8b8a1057c7f972e54f4b113 329 Gene3D G3DSA:2.170.120.12 53 177 8.4E-86 T 01-11-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_14130 3f650f30b8b8a1057c7f972e54f4b113 329 SMART SM00662 23 234 5.9E-104 T 01-11-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_14130 3f650f30b8b8a1057c7f972e54f4b113 329 SUPERFAMILY SSF56553 53 178 4.19E-41 T 01-11-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_14130 3f650f30b8b8a1057c7f972e54f4b113 329 Gene3D G3DSA:1.10.150.20 244 329 9.7E-39 T 01-11-2018 D3790_14130 3f650f30b8b8a1057c7f972e54f4b113 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 2.1E-22 T 01-11-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_14130 3f650f30b8b8a1057c7f972e54f4b113 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 8.0E-113 T 01-11-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_14130 3f650f30b8b8a1057c7f972e54f4b113 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.8E-24 T 01-11-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D3790_08920 1edd5ea312f2fef2da159a8a9655ef65 526 Pfam PF02652 L-lactate permease 5 523 2.4E-127 T 01-11-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 D3790_08920 1edd5ea312f2fef2da159a8a9655ef65 526 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 5 525 2.7E-123 T 01-11-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 D3790_04780 1853606421d1d80138a564806da9cce7 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 23.852 T 01-11-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04780 1853606421d1d80138a564806da9cce7 325 Pfam PF00146 NADH dehydrogenase 17 316 3.9E-119 T 01-11-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04780 1853606421d1d80138a564806da9cce7 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 01-11-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04780 1853606421d1d80138a564806da9cce7 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 01-11-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_13150 637879e5c54785ae706e6f0c8b399649 42 Gene3D G3DSA:3.40.640.10 2 42 1.8E-6 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_13150 637879e5c54785ae706e6f0c8b399649 42 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 41 5.7E-6 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D3790_19405 242e650c6bf950f45c231b1601f79d7e 937 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 928 21.269 T 01-11-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 D3790_19405 242e650c6bf950f45c231b1601f79d7e 937 Gene3D G3DSA:3.90.740.10 195 408 1.7E-231 T 01-11-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D3790_19405 242e650c6bf950f45c231b1601f79d7e 937 Gene3D G3DSA:3.40.50.620 25 629 1.7E-231 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_19405 242e650c6bf950f45c231b1601f79d7e 937 Gene3D G3DSA:1.10.730.20 640 929 2.3E-95 T 01-11-2018 D3790_19405 242e650c6bf950f45c231b1601f79d7e 937 SUPERFAMILY SSF47323 652 928 6.54E-78 T 01-11-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_19405 242e650c6bf950f45c231b1601f79d7e 937 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 640 1.2E-216 T 01-11-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_19405 242e650c6bf950f45c231b1601f79d7e 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 4.4E-31 T 01-11-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 D3790_19405 242e650c6bf950f45c231b1601f79d7e 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 4.4E-31 T 01-11-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 D3790_19405 242e650c6bf950f45c231b1601f79d7e 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 4.4E-31 T 01-11-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 D3790_19405 242e650c6bf950f45c231b1601f79d7e 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 4.4E-31 T 01-11-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 D3790_19405 242e650c6bf950f45c231b1601f79d7e 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 4.4E-31 T 01-11-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 D3790_19405 242e650c6bf950f45c231b1601f79d7e 937 Pfam PF08264 Anticodon-binding domain of tRNA 685 840 3.9E-29 T 01-11-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 D3790_19405 242e650c6bf950f45c231b1601f79d7e 937 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_19405 242e650c6bf950f45c231b1601f79d7e 937 Pfam PF06827 Zinc finger found in FPG and IleRS 897 925 2.9E-8 T 01-11-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 D3790_19405 242e650c6bf950f45c231b1601f79d7e 937 SUPERFAMILY SSF52374 3 647 7.43E-136 T 01-11-2018 D3790_19405 242e650c6bf950f45c231b1601f79d7e 937 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 1.8E-299 T 01-11-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 D3790_19405 242e650c6bf950f45c231b1601f79d7e 937 SUPERFAMILY SSF50677 204 403 7.12E-51 T 01-11-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D3790_07590 cba2044848ebcf90fbcb5ecba5d07423 333 Pfam PF00586 AIR synthase related protein, N-terminal domain 72 153 6.2E-17 T 01-11-2018 IPR016188 PurM-like, N-terminal domain D3790_07590 cba2044848ebcf90fbcb5ecba5d07423 333 SUPERFAMILY SSF56042 183 316 9.72E-22 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily D3790_07590 cba2044848ebcf90fbcb5ecba5d07423 333 PIRSF PIRSF036540 2 326 2.9E-85 T 01-11-2018 IPR011413 Uncharacterised conserved protein UCP036540 D3790_07590 cba2044848ebcf90fbcb5ecba5d07423 333 Pfam PF02769 AIR synthase related protein, C-terminal domain 198 302 2.0E-12 T 01-11-2018 IPR010918 PurM-like, C-terminal domain D3790_07590 cba2044848ebcf90fbcb5ecba5d07423 333 Gene3D G3DSA:3.90.650.10 191 314 4.3E-17 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily D3790_07590 cba2044848ebcf90fbcb5ecba5d07423 333 TIGRFAM TIGR04049 AIR_rel_sll0787: AIR synthase-related protein, sll0787 family 4 323 1.3E-132 T 01-11-2018 IPR024030 AIR synthase-related protein, sll0787 family D3790_07590 cba2044848ebcf90fbcb5ecba5d07423 333 Gene3D G3DSA:3.30.1330.10 5 157 2.7E-26 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily D3790_07590 cba2044848ebcf90fbcb5ecba5d07423 333 SUPERFAMILY SSF55326 40 155 7.2E-26 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily D3790_18670 0b6b31bfa0be428c42f586dfefd1bd1f 435 Gene3D G3DSA:3.20.20.60 1 418 2.6E-185 T 01-11-2018 D3790_18670 0b6b31bfa0be428c42f586dfefd1bd1f 435 ProSitePatterns PS00161 Isocitrate lyase signature. 194 199 - T 01-11-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 D3790_18670 0b6b31bfa0be428c42f586dfefd1bd1f 435 Pfam PF00463 Isocitrate lyase family 257 434 5.3E-47 T 01-11-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 D3790_18670 0b6b31bfa0be428c42f586dfefd1bd1f 435 Pfam PF00463 Isocitrate lyase family 9 256 1.9E-63 T 01-11-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 D3790_18670 0b6b31bfa0be428c42f586dfefd1bd1f 435 SUPERFAMILY SSF51621 6 418 1.79E-154 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D3790_18670 0b6b31bfa0be428c42f586dfefd1bd1f 435 PIRSF PIRSF001362 1 435 7.3E-226 T 01-11-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 D3790_18670 0b6b31bfa0be428c42f586dfefd1bd1f 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 256 4.9E-120 T 01-11-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 D3790_18670 0b6b31bfa0be428c42f586dfefd1bd1f 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 257 435 7.7E-88 T 01-11-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 D3790_03975 cf386f82c4debe5e6771ee0a2aa28844 342 SUPERFAMILY SSF56349 5 300 1.09E-50 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_03975 cf386f82c4debe5e6771ee0a2aa28844 342 Gene3D G3DSA:1.10.150.130 2 118 6.8E-21 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal D3790_03975 cf386f82c4debe5e6771ee0a2aa28844 342 Pfam PF00589 Phage integrase family 122 294 5.9E-39 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D3790_03975 cf386f82c4debe5e6771ee0a2aa28844 342 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 99 1.7E-8 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 D3790_03975 cf386f82c4debe5e6771ee0a2aa28844 342 Gene3D G3DSA:1.10.443.10 120 303 8.5E-52 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_03315 1ac103685554583e100161994489fd27 124 SUPERFAMILY SSF47413 56 117 1.01E-5 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_03315 1ac103685554583e100161994489fd27 124 Gene3D G3DSA:1.10.260.40 53 121 6.6E-7 T 01-11-2018 D3790_06510 8ee894ad28d811a93bf253ca345bcff5 241 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 10 231 2.0E-48 T 01-11-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D3790_06510 8ee894ad28d811a93bf253ca345bcff5 241 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 63 76 - T 01-11-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D3790_06510 8ee894ad28d811a93bf253ca345bcff5 241 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 12 232 2.3E-56 T 01-11-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D3790_06510 8ee894ad28d811a93bf253ca345bcff5 241 SUPERFAMILY SSF51366 9 235 2.72E-77 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D3790_06510 8ee894ad28d811a93bf253ca345bcff5 241 Gene3D G3DSA:3.20.20.70 2 237 2.8E-86 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_06510 8ee894ad28d811a93bf253ca345bcff5 241 SMART SM00934 11 232 9.5E-98 T 01-11-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D3790_06510 8ee894ad28d811a93bf253ca345bcff5 241 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 9 237 39.028 T 01-11-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D3790_17770 5ceed997735aad155d9354b2d6c99d39 389 Gene3D G3DSA:1.20.1250.20 9 191 3.0E-18 T 01-11-2018 D3790_17770 5ceed997735aad155d9354b2d6c99d39 389 SUPERFAMILY SSF103473 14 383 1.44E-38 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_17770 5ceed997735aad155d9354b2d6c99d39 389 Gene3D G3DSA:1.20.1250.20 203 385 4.1E-13 T 01-11-2018 D3790_17770 5ceed997735aad155d9354b2d6c99d39 389 Pfam PF07690 Major Facilitator Superfamily 16 341 1.0E-22 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_08640 66595b01780bdf2ac9fdc48674b3fd89 425 Pfam PF00593 TonB dependent receptor 18 424 6.4E-32 T 01-11-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D3790_08640 66595b01780bdf2ac9fdc48674b3fd89 425 SUPERFAMILY SSF56935 8 425 6.11E-39 T 01-11-2018 D3790_08640 66595b01780bdf2ac9fdc48674b3fd89 425 Gene3D G3DSA:2.40.170.20 1 425 2.3E-70 T 01-11-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3790_11225 127d11de51d28f2c4d26e5df9d49b5e9 305 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 87 103 - T 01-11-2018 IPR033749 Polyprenyl synthetase, conserved site D3790_11225 127d11de51d28f2c4d26e5df9d49b5e9 305 Pfam PF00348 Polyprenyl synthetase 39 278 2.0E-57 T 01-11-2018 IPR000092 Polyprenyl synthetase GO:0008299 D3790_11225 127d11de51d28f2c4d26e5df9d49b5e9 305 SUPERFAMILY SSF48576 9 296 1.83E-87 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily D3790_11225 127d11de51d28f2c4d26e5df9d49b5e9 305 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 221 233 - T 01-11-2018 IPR033749 Polyprenyl synthetase, conserved site D3790_11225 127d11de51d28f2c4d26e5df9d49b5e9 305 Gene3D G3DSA:1.10.600.10 8 305 4.0E-104 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily D3790_15245 7a3480e341dd0b3d827b67bc586f2bf3 157 Gene3D G3DSA:3.40.50.360 6 156 1.4E-33 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_15245 7a3480e341dd0b3d827b67bc586f2bf3 157 Pfam PF02525 Flavodoxin-like fold 32 149 1.5E-26 T 01-11-2018 IPR003680 Flavodoxin-like fold D3790_15245 7a3480e341dd0b3d827b67bc586f2bf3 157 SUPERFAMILY SSF52218 23 155 9.01E-30 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_01490 c058c31031b9e2376d9a52392bf18fd5 433 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 31 53 1.1E-5 T 01-11-2018 D3790_01490 c058c31031b9e2376d9a52392bf18fd5 433 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 163 178 1.1E-5 T 01-11-2018 D3790_01490 c058c31031b9e2376d9a52392bf18fd5 433 Pfam PF01266 FAD dependent oxidoreductase 31 385 2.2E-33 T 01-11-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 D3790_01490 c058c31031b9e2376d9a52392bf18fd5 433 SUPERFAMILY SSF51905 30 397 1.64E-34 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_01490 c058c31031b9e2376d9a52392bf18fd5 433 Gene3D G3DSA:3.50.50.60 31 385 7.1E-47 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_01490 c058c31031b9e2376d9a52392bf18fd5 433 Gene3D G3DSA:3.30.9.10 125 346 7.1E-47 T 01-11-2018 D3790_05130 77d7b90beb9a2206f89d604ac7a5d10b 350 Pfam PF02504 Fatty acid synthesis protein 5 336 1.2E-111 T 01-11-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 D3790_05130 77d7b90beb9a2206f89d604ac7a5d10b 350 Gene3D G3DSA:3.40.718.10 2 349 3.7E-120 T 01-11-2018 D3790_05130 77d7b90beb9a2206f89d604ac7a5d10b 350 SUPERFAMILY SSF53659 4 346 2.71E-100 T 01-11-2018 D3790_05130 77d7b90beb9a2206f89d604ac7a5d10b 350 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 350 138.73 T 01-11-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 D3790_05130 77d7b90beb9a2206f89d604ac7a5d10b 350 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 348 6.9E-126 T 01-11-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 D3790_05130 77d7b90beb9a2206f89d604ac7a5d10b 350 PIRSF PIRSF002465 2 350 2.2E-121 T 01-11-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 D3790_01710 de35297b91920d422fccda586eac4b59 527 SUPERFAMILY SSF110849 34 136 1.6E-9 T 01-11-2018 IPR036086 ParB/Sulfiredoxin superfamily D3790_01710 de35297b91920d422fccda586eac4b59 527 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 27 291 1.4E-112 T 01-11-2018 IPR022304 Integrating conjugative element, PFGI-1, ParB D3790_11605 25ef8f5010d6b22cffaeb6035f5d26f3 460 SMART SM00840 341 402 1.2E-27 T 01-11-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 D3790_11605 25ef8f5010d6b22cffaeb6035f5d26f3 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 4.0E-140 T 01-11-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 D3790_11605 25ef8f5010d6b22cffaeb6035f5d26f3 460 SUPERFAMILY SSF52374 1 313 4.56E-102 T 01-11-2018 D3790_11605 25ef8f5010d6b22cffaeb6035f5d26f3 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.148 T 01-11-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 D3790_11605 25ef8f5010d6b22cffaeb6035f5d26f3 460 Gene3D G3DSA:3.40.50.620 1 305 1.2E-133 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_11605 25ef8f5010d6b22cffaeb6035f5d26f3 460 Gene3D G3DSA:1.20.120.640 306 460 7.5E-55 T 01-11-2018 D3790_11605 25ef8f5010d6b22cffaeb6035f5d26f3 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 6.0E-30 T 01-11-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 D3790_11605 25ef8f5010d6b22cffaeb6035f5d26f3 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 6.0E-30 T 01-11-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 D3790_11605 25ef8f5010d6b22cffaeb6035f5d26f3 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 6.0E-30 T 01-11-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 D3790_11605 25ef8f5010d6b22cffaeb6035f5d26f3 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 6.0E-30 T 01-11-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 D3790_11605 25ef8f5010d6b22cffaeb6035f5d26f3 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 1.0E-190 T 01-11-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 D3790_11605 25ef8f5010d6b22cffaeb6035f5d26f3 460 Pfam PF09190 DALR domain 341 402 8.9E-25 T 01-11-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 D3790_11605 25ef8f5010d6b22cffaeb6035f5d26f3 460 SUPERFAMILY SSF47323 316 459 3.79E-41 T 01-11-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_02900 82e53afd7f396abc6e20d627a4f90bab 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 416 41.305 T 01-11-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 D3790_02900 82e53afd7f396abc6e20d627a4f90bab 417 SUPERFAMILY SSF53720 2 412 3.8E-114 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D3790_02900 82e53afd7f396abc6e20d627a4f90bab 417 Pfam PF00171 Aldehyde dehydrogenase family 4 280 3.1E-16 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D3790_02900 82e53afd7f396abc6e20d627a4f90bab 417 PIRSF PIRSF000151 1 416 9.5E-176 T 01-11-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 D3790_02900 82e53afd7f396abc6e20d627a4f90bab 417 Gene3D G3DSA:3.40.605.10 14 411 3.4E-166 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D3790_02900 82e53afd7f396abc6e20d627a4f90bab 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 01-11-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 D3790_02900 82e53afd7f396abc6e20d627a4f90bab 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 406 4.5E-188 T 01-11-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 D3790_02900 82e53afd7f396abc6e20d627a4f90bab 417 Gene3D G3DSA:3.40.309.10 222 374 3.4E-166 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D3790_05950 0516f0551b6a6098ff4d4cb02cffaecb 89 Pfam PF13358 DDE superfamily endonuclease 3 57 5.9E-16 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_05950 0516f0551b6a6098ff4d4cb02cffaecb 89 Gene3D G3DSA:3.30.420.470 2 82 1.1E-9 T 01-11-2018 D3790_16205 2059c9d3f7531b5ae9cd0860fd1337f9 493 Pfam PF07690 Major Facilitator Superfamily 14 404 9.5E-53 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_16205 2059c9d3f7531b5ae9cd0860fd1337f9 493 PRINTS PR01036 Tetracycline resistance protein TetB signature 12 36 3.5E-7 T 01-11-2018 D3790_16205 2059c9d3f7531b5ae9cd0860fd1337f9 493 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 3.5E-7 T 01-11-2018 D3790_16205 2059c9d3f7531b5ae9cd0860fd1337f9 493 PRINTS PR01036 Tetracycline resistance protein TetB signature 298 322 3.5E-7 T 01-11-2018 D3790_16205 2059c9d3f7531b5ae9cd0860fd1337f9 493 PRINTS PR01036 Tetracycline resistance protein TetB signature 72 94 3.5E-7 T 01-11-2018 D3790_16205 2059c9d3f7531b5ae9cd0860fd1337f9 493 PRINTS PR01036 Tetracycline resistance protein TetB signature 395 414 3.5E-7 T 01-11-2018 D3790_16205 2059c9d3f7531b5ae9cd0860fd1337f9 493 SUPERFAMILY SSF103473 4 492 6.93E-63 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_16205 2059c9d3f7531b5ae9cd0860fd1337f9 493 Gene3D G3DSA:1.20.1250.20 262 488 5.6E-18 T 01-11-2018 D3790_16205 2059c9d3f7531b5ae9cd0860fd1337f9 493 Gene3D G3DSA:1.20.1720.10 9 215 2.0E-42 T 01-11-2018 D3790_13280 9ae0319b88887fa804972922ca10dd97 143 Gene3D G3DSA:2.30.110.10 4 141 1.8E-15 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 D3790_13280 9ae0319b88887fa804972922ca10dd97 143 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 11 93 1.9E-5 T 01-11-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D3790_13280 9ae0319b88887fa804972922ca10dd97 143 SUPERFAMILY SSF50475 10 139 4.75E-19 T 01-11-2018 D3790_13280 9ae0319b88887fa804972922ca10dd97 143 PIRSF PIRSF009554 3 143 4.4E-62 T 01-11-2018 IPR011194 Uncharacterised protein family UPF0306 D3790_13280 9ae0319b88887fa804972922ca10dd97 143 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 6 143 34.555 T 01-11-2018 IPR011194 Uncharacterised protein family UPF0306 D3790_06675 3b86bea1f09b8f510fb04f9f2f6a3c66 390 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 384 5.0E-109 T 01-11-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 D3790_06675 3b86bea1f09b8f510fb04f9f2f6a3c66 390 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 127 135 - T 01-11-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 D3790_06675 3b86bea1f09b8f510fb04f9f2f6a3c66 390 Gene3D G3DSA:2.60.120.10 6 276 4.1E-140 T 01-11-2018 IPR014710 RmlC-like jelly roll fold D3790_06675 3b86bea1f09b8f510fb04f9f2f6a3c66 390 Gene3D G3DSA:1.10.441.10 151 301 4.1E-140 T 01-11-2018 D3790_06675 3b86bea1f09b8f510fb04f9f2f6a3c66 390 Pfam PF01238 Phosphomannose isomerase type I 1 356 6.1E-95 T 01-11-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 D3790_06675 3b86bea1f09b8f510fb04f9f2f6a3c66 390 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 3.4E-66 T 01-11-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 D3790_06675 3b86bea1f09b8f510fb04f9f2f6a3c66 390 PRINTS PR00714 Phosphomannose isomerase type I signature 127 150 3.4E-66 T 01-11-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 D3790_06675 3b86bea1f09b8f510fb04f9f2f6a3c66 390 PRINTS PR00714 Phosphomannose isomerase type I signature 221 236 3.4E-66 T 01-11-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 D3790_06675 3b86bea1f09b8f510fb04f9f2f6a3c66 390 PRINTS PR00714 Phosphomannose isomerase type I signature 256 275 3.4E-66 T 01-11-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 D3790_06675 3b86bea1f09b8f510fb04f9f2f6a3c66 390 PRINTS PR00714 Phosphomannose isomerase type I signature 237 256 3.4E-66 T 01-11-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 D3790_06675 3b86bea1f09b8f510fb04f9f2f6a3c66 390 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 3.4E-66 T 01-11-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 D3790_06675 3b86bea1f09b8f510fb04f9f2f6a3c66 390 PRINTS PR00714 Phosphomannose isomerase type I signature 275 294 3.4E-66 T 01-11-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 D3790_06675 3b86bea1f09b8f510fb04f9f2f6a3c66 390 PRINTS PR00714 Phosphomannose isomerase type I signature 82 103 3.4E-66 T 01-11-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 D3790_06675 3b86bea1f09b8f510fb04f9f2f6a3c66 390 PIRSF PIRSF001480 1 390 2.6E-106 T 01-11-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 D3790_06675 3b86bea1f09b8f510fb04f9f2f6a3c66 390 Gene3D G3DSA:2.60.120.10 302 383 4.1E-140 T 01-11-2018 IPR014710 RmlC-like jelly roll fold D3790_06675 3b86bea1f09b8f510fb04f9f2f6a3c66 390 SUPERFAMILY SSF51182 1 381 4.89E-97 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily D3790_04450 cf8a668cec7bde03f64014be24daa7e9 317 Gene3D G3DSA:3.40.50.1100 43 145 3.1E-124 T 01-11-2018 D3790_04450 cf8a668cec7bde03f64014be24daa7e9 317 Gene3D G3DSA:3.40.50.1100 12 306 3.1E-124 T 01-11-2018 D3790_04450 cf8a668cec7bde03f64014be24daa7e9 317 SUPERFAMILY SSF53686 4 310 4.06E-97 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D3790_04450 cf8a668cec7bde03f64014be24daa7e9 317 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 3.7E-70 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D3790_04450 cf8a668cec7bde03f64014be24daa7e9 317 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 4.8E-145 T 01-11-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 D3790_04450 cf8a668cec7bde03f64014be24daa7e9 317 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 1.6E-137 T 01-11-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 D3790_04450 cf8a668cec7bde03f64014be24daa7e9 317 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 01-11-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 D3790_18430 1eb8b49d2886298c8a21be69c345c155 287 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 01-11-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 D3790_18430 1eb8b49d2886298c8a21be69c345c155 287 Pfam PF01148 Cytidylyltransferase family 4 278 1.4E-64 T 01-11-2018 D3790_16045 7f0fc8584dcf6b9ea917246f7631812b 1201 Pfam PF14331 ImcF-related N-terminal domain 214 465 6.3E-71 T 01-11-2018 IPR025743 ImcF-related, N-terminal domain D3790_16045 7f0fc8584dcf6b9ea917246f7631812b 1201 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 37 1198 1.1E-299 T 01-11-2018 IPR017731 Type VI secretion system, IcmF D3790_16045 7f0fc8584dcf6b9ea917246f7631812b 1201 SUPERFAMILY SSF52540 139 294 3.41E-6 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16045 7f0fc8584dcf6b9ea917246f7631812b 1201 Pfam PF06761 Intracellular multiplication and human macrophage-killing 519 845 5.1E-77 T 01-11-2018 IPR009612 ImcF-related D3790_16045 7f0fc8584dcf6b9ea917246f7631812b 1201 Pfam PF06744 Type VI secretion protein IcmF C-terminal 953 1149 6.9E-54 T 01-11-2018 IPR010623 Type VI secretion system IcmF, C-terminal D3790_01160 2ab6f09cd660fa07d8e0745b448214cd 161 SUPERFAMILY SSF49777 3 161 8.24E-50 T 01-11-2018 IPR036610 PEBP-like superfamily D3790_01160 2ab6f09cd660fa07d8e0745b448214cd 161 Gene3D G3DSA:3.90.280.10 1 161 1.3E-50 T 01-11-2018 IPR036610 PEBP-like superfamily D3790_01160 2ab6f09cd660fa07d8e0745b448214cd 161 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 20 159 9.5E-40 T 01-11-2018 IPR005247 YbhB/YbcL D3790_01160 2ab6f09cd660fa07d8e0745b448214cd 161 Pfam PF01161 Phosphatidylethanolamine-binding protein 20 159 1.4E-34 T 01-11-2018 IPR008914 Phosphatidylethanolamine-binding protein D3790_10175 948ec44211cce79474173e1b9981d8ec 370 SUPERFAMILY SSF117916 14 88 4.58E-6 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily D3790_10175 948ec44211cce79474173e1b9981d8ec 370 ProSitePatterns PS01215 Mrp family signature. 214 230 - T 01-11-2018 IPR000808 Mrp, conserved site GO:0005524 D3790_10175 948ec44211cce79474173e1b9981d8ec 370 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 107 350 5.3E-101 T 01-11-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 D3790_10175 948ec44211cce79474173e1b9981d8ec 370 SUPERFAMILY SSF52540 109 356 1.61E-56 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_10175 948ec44211cce79474173e1b9981d8ec 370 Gene3D G3DSA:3.40.50.300 101 349 1.5E-80 T 01-11-2018 D3790_10175 948ec44211cce79474173e1b9981d8ec 370 Hamap MF_02040 Iron-sulfur cluster carrier protein. 102 351 36.883 T 01-11-2018 IPR019591 Mrp/NBP35 ATP-binding protein D3790_06185 85ef40aa86fbe1a6d8662abfc32fc264 305 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 277 2.6E-113 T 01-11-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 D3790_06185 85ef40aa86fbe1a6d8662abfc32fc264 305 SUPERFAMILY SSF53448 8 295 2.48E-61 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_06185 85ef40aa86fbe1a6d8662abfc32fc264 305 Pfam PF00483 Nucleotidyl transferase 10 278 5.2E-25 T 01-11-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 D3790_06185 85ef40aa86fbe1a6d8662abfc32fc264 305 Gene3D G3DSA:3.90.550.10 1 303 6.8E-89 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_03235 3fad48dd3cb2ab5e3b9bb2e41e7c2f93 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.3E-46 T 01-11-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 D3790_03235 3fad48dd3cb2ab5e3b9bb2e41e7c2f93 156 Gene3D G3DSA:3.40.1280.10 1 156 1.1E-51 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D3790_03235 3fad48dd3cb2ab5e3b9bb2e41e7c2f93 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 5.0E-81 T 01-11-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 D3790_03235 3fad48dd3cb2ab5e3b9bb2e41e7c2f93 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.535 T 01-11-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 D3790_03235 3fad48dd3cb2ab5e3b9bb2e41e7c2f93 156 PIRSF PIRSF004505 1 155 9.9E-40 T 01-11-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 D3790_03235 3fad48dd3cb2ab5e3b9bb2e41e7c2f93 156 SUPERFAMILY SSF75217 1 154 1.41E-48 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases D3790_02985 e07ede34ecbcb145398b9a2df3a70c49 453 Pfam PF02978 Signal peptide binding domain 329 427 6.0E-33 T 01-11-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 D3790_02985 e07ede34ecbcb145398b9a2df3a70c49 453 Gene3D G3DSA:1.20.120.140 4 305 2.6E-123 T 01-11-2018 D3790_02985 e07ede34ecbcb145398b9a2df3a70c49 453 SUPERFAMILY SSF52540 42 354 3.08E-57 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_02985 e07ede34ecbcb145398b9a2df3a70c49 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D3790_02985 e07ede34ecbcb145398b9a2df3a70c49 453 SUPERFAMILY SSF47446 329 431 3.27E-38 T 01-11-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 D3790_02985 e07ede34ecbcb145398b9a2df3a70c49 453 SMART SM00382 99 247 1.7E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_02985 e07ede34ecbcb145398b9a2df3a70c49 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 2.5E-75 T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D3790_02985 e07ede34ecbcb145398b9a2df3a70c49 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 7.4E-22 T 01-11-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D3790_02985 e07ede34ecbcb145398b9a2df3a70c49 453 SMART SM00963 1 86 2.7E-36 T 01-11-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D3790_02985 e07ede34ecbcb145398b9a2df3a70c49 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.3E-178 T 01-11-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 D3790_02985 e07ede34ecbcb145398b9a2df3a70c49 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.679 T 01-11-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 D3790_02985 e07ede34ecbcb145398b9a2df3a70c49 453 Gene3D G3DSA:3.40.50.300 90 285 2.6E-123 T 01-11-2018 D3790_02985 e07ede34ecbcb145398b9a2df3a70c49 453 SMART SM00962 100 296 2.5E-118 T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D3790_02985 e07ede34ecbcb145398b9a2df3a70c49 453 Gene3D G3DSA:1.10.260.30 328 450 3.2E-46 T 01-11-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 D3790_02875 489528b14a6dd85e64f2ce75718a1a97 487 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 481 2.5E-182 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 D3790_02875 489528b14a6dd85e64f2ce75718a1a97 487 SUPERFAMILY SSF53187 12 480 6.83E-64 T 01-11-2018 D3790_02875 489528b14a6dd85e64f2ce75718a1a97 487 Pfam PF01546 Peptidase family M20/M25/M40 73 479 4.0E-20 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 D3790_02875 489528b14a6dd85e64f2ce75718a1a97 487 Gene3D G3DSA:3.40.630.10 1 236 2.1E-63 T 01-11-2018 D3790_02875 489528b14a6dd85e64f2ce75718a1a97 487 Gene3D G3DSA:3.40.630.10 348 483 1.5E-26 T 01-11-2018 D3790_02875 489528b14a6dd85e64f2ce75718a1a97 487 Pfam PF07687 Peptidase dimerisation domain 204 291 1.1E-5 T 01-11-2018 IPR011650 Peptidase M20, dimerisation domain D3790_02875 489528b14a6dd85e64f2ce75718a1a97 487 PRINTS PR00934 X-His dipeptidase (M25) signature 427 443 6.6E-95 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 D3790_02875 489528b14a6dd85e64f2ce75718a1a97 487 PRINTS PR00934 X-His dipeptidase (M25) signature 362 380 6.6E-95 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 D3790_02875 489528b14a6dd85e64f2ce75718a1a97 487 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 6.6E-95 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 D3790_02875 489528b14a6dd85e64f2ce75718a1a97 487 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 6.6E-95 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 D3790_02875 489528b14a6dd85e64f2ce75718a1a97 487 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 6.6E-95 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 D3790_02875 489528b14a6dd85e64f2ce75718a1a97 487 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 6.6E-95 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 D3790_02875 489528b14a6dd85e64f2ce75718a1a97 487 PRINTS PR00934 X-His dipeptidase (M25) signature 250 269 6.6E-95 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 D3790_02875 489528b14a6dd85e64f2ce75718a1a97 487 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 6.6E-95 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 D3790_02875 489528b14a6dd85e64f2ce75718a1a97 487 PRINTS PR00934 X-His dipeptidase (M25) signature 449 471 6.6E-95 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 D3790_02875 489528b14a6dd85e64f2ce75718a1a97 487 PIRSF PIRSF016599 1 484 5.7E-209 T 01-11-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 D3790_09260 7d7d601517701c0cbf63033b3ac2ab8f 136 SUPERFAMILY SSF101116 10 129 6.93E-40 T 01-11-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 D3790_09260 7d7d601517701c0cbf63033b3ac2ab8f 136 Pfam PF02561 Flagellar protein FliS 10 125 6.8E-38 T 01-11-2018 IPR003713 Flagellar protein FliS GO:0044780 D3790_09260 7d7d601517701c0cbf63033b3ac2ab8f 136 PIRSF PIRSF039090 1 135 1.2E-42 T 01-11-2018 IPR003713 Flagellar protein FliS GO:0044780 D3790_09260 7d7d601517701c0cbf63033b3ac2ab8f 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 125 4.3E-35 T 01-11-2018 IPR003713 Flagellar protein FliS GO:0044780 D3790_09260 7d7d601517701c0cbf63033b3ac2ab8f 136 Gene3D G3DSA:1.20.120.340 1 128 1.4E-41 T 01-11-2018 D3790_09935 90900fde785496aaa2db09cb80ad3aae 429 PIRSF PIRSF001529 1 429 2.5E-179 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D3790_09935 90900fde785496aaa2db09cb80ad3aae 429 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 427 40.857 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D3790_09935 90900fde785496aaa2db09cb80ad3aae 429 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 224 405 2.7E-36 T 01-11-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_09935 90900fde785496aaa2db09cb80ad3aae 429 PRINTS PR00981 Seryl-tRNA synthetase signature 338 354 7.5E-33 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D3790_09935 90900fde785496aaa2db09cb80ad3aae 429 PRINTS PR00981 Seryl-tRNA synthetase signature 281 294 7.5E-33 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D3790_09935 90900fde785496aaa2db09cb80ad3aae 429 PRINTS PR00981 Seryl-tRNA synthetase signature 356 372 7.5E-33 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D3790_09935 90900fde785496aaa2db09cb80ad3aae 429 PRINTS PR00981 Seryl-tRNA synthetase signature 269 281 7.5E-33 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D3790_09935 90900fde785496aaa2db09cb80ad3aae 429 PRINTS PR00981 Seryl-tRNA synthetase signature 321 334 7.5E-33 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D3790_09935 90900fde785496aaa2db09cb80ad3aae 429 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 7.8E-30 T 01-11-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 D3790_09935 90900fde785496aaa2db09cb80ad3aae 429 SUPERFAMILY SSF55681 116 423 3.04E-98 T 01-11-2018 D3790_09935 90900fde785496aaa2db09cb80ad3aae 429 Gene3D G3DSA:3.30.930.10 105 429 2.1E-111 T 01-11-2018 D3790_09935 90900fde785496aaa2db09cb80ad3aae 429 SUPERFAMILY SSF46589 1 110 2.14E-28 T 01-11-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 D3790_09935 90900fde785496aaa2db09cb80ad3aae 429 Gene3D G3DSA:1.10.287.40 1 104 1.7E-19 T 01-11-2018 D3790_09935 90900fde785496aaa2db09cb80ad3aae 429 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 422 8.5E-177 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D3790_16910 0c3efcf595ef611df079d2fafd1cabd0 201 Pfam PF01810 LysE type translocator 15 189 2.9E-18 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 D3790_07955 eff9e4c140690f986ca7ce58e0edd50f 53 Gene3D G3DSA:1.20.5.40 10 46 8.2E-7 T 01-11-2018 D3790_07955 eff9e4c140690f986ca7ce58e0edd50f 53 SUPERFAMILY SSF53041 4 47 5.1E-8 T 01-11-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 D3790_07955 eff9e4c140690f986ca7ce58e0edd50f 53 Pfam PF00239 Resolvase, N terminal domain 6 47 9.2E-7 T 01-11-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 D3790_06235 ed22180002063bebe5b816c3dd43d1a2 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 76 6.6E-14 T 01-11-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain D3790_06235 ed22180002063bebe5b816c3dd43d1a2 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 300 3.0E-25 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_06235 ed22180002063bebe5b816c3dd43d1a2 302 Gene3D G3DSA:1.10.3720.10 100 298 1.2E-15 T 01-11-2018 IPR035906 MetI-like superfamily D3790_06235 ed22180002063bebe5b816c3dd43d1a2 302 SUPERFAMILY SSF161098 100 283 2.09E-23 T 01-11-2018 IPR035906 MetI-like superfamily D3790_18535 db101887078474bbff8a4833ca61ab28 188 PIRSF PIRSF004682 1 188 1.6E-65 T 01-11-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 D3790_18535 db101887078474bbff8a4833ca61ab28 188 Pfam PF13242 HAD-hyrolase-like 109 179 2.7E-14 T 01-11-2018 D3790_18535 db101887078474bbff8a4833ca61ab28 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 154 2.7E-38 T 01-11-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 D3790_18535 db101887078474bbff8a4833ca61ab28 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 150 2.6E-39 T 01-11-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 D3790_18535 db101887078474bbff8a4833ca61ab28 188 SUPERFAMILY SSF56784 3 185 3.2E-52 T 01-11-2018 IPR036412 HAD-like superfamily D3790_18535 db101887078474bbff8a4833ca61ab28 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 180 3.2E-90 T 01-11-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 D3790_18535 db101887078474bbff8a4833ca61ab28 188 Gene3D G3DSA:3.40.50.1000 4 188 2.7E-64 T 01-11-2018 IPR023214 HAD superfamily D3790_17390 026f391ed7dd33280916570690617273 295 Pfam PF13612 Transposase DDE domain 104 258 6.3E-78 T 01-11-2018 IPR025668 Transposase DDE domain D3790_01765 026f391ed7dd33280916570690617273 295 Pfam PF13612 Transposase DDE domain 104 258 6.3E-78 T 01-11-2018 IPR025668 Transposase DDE domain D3790_12675 026f391ed7dd33280916570690617273 295 Pfam PF13612 Transposase DDE domain 104 258 6.3E-78 T 01-11-2018 IPR025668 Transposase DDE domain D3790_18755 026f391ed7dd33280916570690617273 295 Pfam PF13612 Transposase DDE domain 104 258 6.3E-78 T 01-11-2018 IPR025668 Transposase DDE domain D3790_12445 026f391ed7dd33280916570690617273 295 Pfam PF13612 Transposase DDE domain 104 258 6.3E-78 T 01-11-2018 IPR025668 Transposase DDE domain D3790_13525 b33ec21c90ab19bb527ae00e815fd4c5 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 1.6E-26 T 01-11-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D3790_13525 b33ec21c90ab19bb527ae00e815fd4c5 206 Gene3D G3DSA:1.10.287.460 5 68 2.7E-18 T 01-11-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 D3790_13525 b33ec21c90ab19bb527ae00e815fd4c5 206 Gene3D G3DSA:3.10.50.40 69 206 3.8E-51 T 01-11-2018 D3790_13525 b33ec21c90ab19bb527ae00e815fd4c5 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 1.4E-23 T 01-11-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 D3790_13525 b33ec21c90ab19bb527ae00e815fd4c5 206 SUPERFAMILY SSF54534 8 205 6.29E-55 T 01-11-2018 D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 4.7E-76 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 4.7E-76 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 4.7E-76 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 4.7E-76 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 4.7E-76 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 4.7E-76 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 4.7E-76 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 4.7E-76 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 4.7E-76 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.0E-124 T 01-11-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 Gene3D G3DSA:3.50.50.60 9 311 4.2E-130 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.8E-41 T 01-11-2018 D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.8E-41 T 01-11-2018 D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.8E-41 T 01-11-2018 D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.8E-41 T 01-11-2018 D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.8E-41 T 01-11-2018 D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 Gene3D G3DSA:3.50.50.60 118 244 4.2E-130 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 SUPERFAMILY SSF51905 1 313 7.62E-55 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 2.4E-51 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D3790_09960 af9aad67ba9d1758a63f9fce1f8d5e15 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 01-11-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 D3790_12670 cbc2388709a613c75f7188a7ec62ce15 658 Gene3D G3DSA:1.10.530.10 486 658 1.2E-51 T 01-11-2018 D3790_12670 cbc2388709a613c75f7188a7ec62ce15 658 SUPERFAMILY SSF53955 492 651 1.3E-48 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily D3790_12670 cbc2388709a613c75f7188a7ec62ce15 658 Pfam PF01464 Transglycosylase SLT domain 502 607 1.6E-31 T 01-11-2018 IPR008258 Transglycosylase SLT domain 1 D3790_12670 cbc2388709a613c75f7188a7ec62ce15 658 SUPERFAMILY SSF48435 43 490 1.05E-123 T 01-11-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 D3790_12670 cbc2388709a613c75f7188a7ec62ce15 658 Pfam PF14718 Soluble lytic murein transglycosylase L domain 419 485 2.2E-23 T 01-11-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 D3790_12670 cbc2388709a613c75f7188a7ec62ce15 658 Gene3D G3DSA:1.25.20.10 43 402 1.4E-110 T 01-11-2018 D3790_12670 cbc2388709a613c75f7188a7ec62ce15 658 Gene3D G3DSA:1.10.1240.20 416 485 1.4E-24 T 01-11-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 D3790_12670 cbc2388709a613c75f7188a7ec62ce15 658 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 514 542 - T 01-11-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 D3790_19600 dc2840401746d2d62e56ee7aa1f30796 332 Gene3D G3DSA:1.10.3470.10 5 332 2.1E-88 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_19600 dc2840401746d2d62e56ee7aa1f30796 332 Pfam PF01032 FecCD transport family 18 330 1.3E-86 T 01-11-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 D3790_19600 dc2840401746d2d62e56ee7aa1f30796 332 SUPERFAMILY SSF81345 8 330 5.62E-75 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_08265 d92f301ca41734842302419a306cc7d6 264 SUPERFAMILY SSF52540 4 236 6.95E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_08265 d92f301ca41734842302419a306cc7d6 264 Pfam PF00005 ABC transporter 26 174 2.7E-26 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_08265 d92f301ca41734842302419a306cc7d6 264 SMART SM00382 34 223 9.6E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_08265 d92f301ca41734842302419a306cc7d6 264 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_08265 d92f301ca41734842302419a306cc7d6 264 Gene3D G3DSA:3.40.50.300 3 264 1.7E-75 T 01-11-2018 D3790_11490 627af69e1f32b17e8f7dc2f869bea25d 367 SUPERFAMILY SSF160355 64 326 4.58E-75 T 01-11-2018 D3790_11490 627af69e1f32b17e8f7dc2f869bea25d 367 Pfam PF02706 Chain length determinant protein 25 123 2.3E-16 T 01-11-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 D3790_11490 627af69e1f32b17e8f7dc2f869bea25d 367 Gene3D G3DSA:1.10.287.210 203 313 2.9E-82 T 01-11-2018 D3790_11490 627af69e1f32b17e8f7dc2f869bea25d 367 Gene3D G3DSA:3.30.1890.10 65 326 2.9E-82 T 01-11-2018 D3790_15045 ad823114b96ef6d6204e3cf136fe8557 357 PIRSF PIRSF000390 1 357 1.0E-100 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase D3790_15045 ad823114b96ef6d6204e3cf136fe8557 357 SUPERFAMILY SSF53383 10 356 3.32E-112 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_15045 ad823114b96ef6d6204e3cf136fe8557 357 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 356 1.7E-115 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase D3790_15045 ad823114b96ef6d6204e3cf136fe8557 357 Gene3D G3DSA:3.90.1150.10 244 357 1.1E-30 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_15045 ad823114b96ef6d6204e3cf136fe8557 357 Gene3D G3DSA:3.40.640.10 1 242 2.5E-93 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_07625 31943152f44eea967350860cb36da07d 420 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.352 T 01-11-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D3790_07625 31943152f44eea967350860cb36da07d 420 Gene3D G3DSA:3.40.50.720 161 313 1.2E-43 T 01-11-2018 D3790_07625 31943152f44eea967350860cb36da07d 420 SUPERFAMILY SSF69742 1 158 3.4E-46 T 01-11-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D3790_07625 31943152f44eea967350860cb36da07d 420 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 5.4E-47 T 01-11-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D3790_07625 31943152f44eea967350860cb36da07d 420 SUPERFAMILY SSF51735 162 315 5.2E-33 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_07625 31943152f44eea967350860cb36da07d 420 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 01-11-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D3790_07625 31943152f44eea967350860cb36da07d 420 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 417 1.1E-153 T 01-11-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D3790_07625 31943152f44eea967350860cb36da07d 420 PIRSF PIRSF000445 1 420 3.2E-153 T 01-11-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D3790_07625 31943152f44eea967350860cb36da07d 420 Gene3D G3DSA:3.30.460.30 1 158 3.5E-55 T 01-11-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D3790_07625 31943152f44eea967350860cb36da07d 420 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 7.5E-48 T 01-11-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase D3790_07625 31943152f44eea967350860cb36da07d 420 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 321 416 6.6E-25 T 01-11-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D3790_07625 31943152f44eea967350860cb36da07d 420 SUPERFAMILY SSF69075 318 418 2.22E-26 T 01-11-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D3790_16280 c7b4eb343a37b5a291866b623e3e650c 783 Gene3D G3DSA:3.30.420.140 325 450 6.0E-153 T 01-11-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 D3790_16280 c7b4eb343a37b5a291866b623e3e650c 783 SUPERFAMILY SSF53098 322 468 4.3E-47 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_16280 c7b4eb343a37b5a291866b623e3e650c 783 Gene3D G3DSA:1.10.3500.10 112 497 6.0E-153 T 01-11-2018 IPR023323 Tex-like domain superfamily D3790_16280 c7b4eb343a37b5a291866b623e3e650c 783 SUPERFAMILY SSF47781 559 631 5.19E-20 T 01-11-2018 IPR010994 RuvA domain 2-like D3790_16280 c7b4eb343a37b5a291866b623e3e650c 783 SMART SM00316 648 719 2.2E-26 T 01-11-2018 IPR022967 RNA-binding domain, S1 D3790_16280 c7b4eb343a37b5a291866b623e3e650c 783 Pfam PF16921 Tex protein YqgF-like domain 327 450 2.2E-49 T 01-11-2018 IPR032639 Tex protein, YqgF-like domain D3790_16280 c7b4eb343a37b5a291866b623e3e650c 783 SMART SM00732 326 423 2.8E-35 T 01-11-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 D3790_16280 c7b4eb343a37b5a291866b623e3e650c 783 Pfam PF12836 Helix-hairpin-helix motif 490 554 3.2E-26 T 01-11-2018 D3790_16280 c7b4eb343a37b5a291866b623e3e650c 783 Pfam PF09371 Tex-like protein N-terminal domain 9 193 1.1E-69 T 01-11-2018 IPR018974 Tex-like protein, N-terminal D3790_16280 c7b4eb343a37b5a291866b623e3e650c 783 Pfam PF00575 S1 RNA binding domain 648 719 6.1E-23 T 01-11-2018 IPR003029 S1 domain GO:0003676 D3790_16280 c7b4eb343a37b5a291866b623e3e650c 783 Gene3D G3DSA:2.40.50.140 630 723 1.8E-28 T 01-11-2018 D3790_16280 c7b4eb343a37b5a291866b623e3e650c 783 SUPERFAMILY SSF47781 469 556 3.45E-27 T 01-11-2018 IPR010994 RuvA domain 2-like D3790_16280 c7b4eb343a37b5a291866b623e3e650c 783 Gene3D G3DSA:1.10.150.310 498 629 5.1E-49 T 01-11-2018 D3790_16280 c7b4eb343a37b5a291866b623e3e650c 783 SUPERFAMILY SSF158832 2 321 1.24E-119 T 01-11-2018 D3790_16280 c7b4eb343a37b5a291866b623e3e650c 783 Gene3D G3DSA:1.10.10.650 2 109 9.3E-41 T 01-11-2018 IPR023319 Tex-like protein, HTH domain superfamily D3790_16280 c7b4eb343a37b5a291866b623e3e650c 783 SUPERFAMILY SSF50249 637 722 2.5E-25 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_14490 d2547c8611bd56943bb617598f719323 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 534 554 8.7E-70 T 01-11-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D3790_14490 d2547c8611bd56943bb617598f719323 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 385 405 8.7E-70 T 01-11-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D3790_14490 d2547c8611bd56943bb617598f719323 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 185 201 8.7E-70 T 01-11-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D3790_14490 d2547c8611bd56943bb617598f719323 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 244 259 8.7E-70 T 01-11-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D3790_14490 d2547c8611bd56943bb617598f719323 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 132 145 8.7E-70 T 01-11-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D3790_14490 d2547c8611bd56943bb617598f719323 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 576 605 8.7E-70 T 01-11-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D3790_14490 d2547c8611bd56943bb617598f719323 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 708 734 8.7E-70 T 01-11-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D3790_14490 d2547c8611bd56943bb617598f719323 879 Gene3D G3DSA:1.20.1440.90 303 388 9.8E-23 T 01-11-2018 D3790_14490 d2547c8611bd56943bb617598f719323 879 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 879 18.293 T 01-11-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D3790_14490 d2547c8611bd56943bb617598f719323 879 Pfam PF00311 Phosphoenolpyruvate carboxylase 128 879 7.9E-294 T 01-11-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D3790_14490 d2547c8611bd56943bb617598f719323 879 SUPERFAMILY SSF51621 6 879 0.0 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D3790_14490 d2547c8611bd56943bb617598f719323 879 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 133 144 - T 01-11-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D3790_14490 d2547c8611bd56943bb617598f719323 879 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 536 548 - T 01-11-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D3790_14420 2bb2a69490b9e548bd13a4ba9624fd77 305 Gene3D G3DSA:3.40.190.10 91 280 1.2E-72 T 01-11-2018 D3790_14420 2bb2a69490b9e548bd13a4ba9624fd77 305 SUPERFAMILY SSF46785 1 82 1.04E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_14420 2bb2a69490b9e548bd13a4ba9624fd77 305 Pfam PF03466 LysR substrate binding domain 88 293 1.5E-49 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_14420 2bb2a69490b9e548bd13a4ba9624fd77 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.1E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_14420 2bb2a69490b9e548bd13a4ba9624fd77 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.1E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_14420 2bb2a69490b9e548bd13a4ba9624fd77 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.1E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_14420 2bb2a69490b9e548bd13a4ba9624fd77 305 Gene3D G3DSA:3.40.190.10 164 267 1.2E-72 T 01-11-2018 D3790_14420 2bb2a69490b9e548bd13a4ba9624fd77 305 Gene3D G3DSA:1.10.10.10 1 84 2.9E-28 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_14420 2bb2a69490b9e548bd13a4ba9624fd77 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.8E-20 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_14420 2bb2a69490b9e548bd13a4ba9624fd77 305 SUPERFAMILY SSF53850 89 296 3.57E-42 T 01-11-2018 D3790_07535 1eaf909da35abe3ebfd2269bdd9a5072 126 Gene3D G3DSA:3.30.720.110 70 126 2.5E-28 T 01-11-2018 D3790_07535 1eaf909da35abe3ebfd2269bdd9a5072 126 Pfam PF12681 Glyoxalase-like domain 12 123 1.2E-8 T 01-11-2018 IPR025870 Glyoxalase-like domain D3790_07535 1eaf909da35abe3ebfd2269bdd9a5072 126 SUPERFAMILY SSF54593 15 123 6.62E-17 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D3790_07535 1eaf909da35abe3ebfd2269bdd9a5072 126 Gene3D G3DSA:3.30.720.120 2 58 1.3E-28 T 01-11-2018 D3790_07535 1eaf909da35abe3ebfd2269bdd9a5072 126 PIRSF PIRSF039020 7 126 3.1E-41 T 01-11-2018 IPR026275 Glyoxalase/dioxygenase/EhpR D3790_05300 16015bfa1e2a5d3abe8636a4eb55345a 417 SUPERFAMILY SSF53659 4 417 2.69E-148 T 01-11-2018 D3790_05300 16015bfa1e2a5d3abe8636a4eb55345a 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 413 5.8E-118 T 01-11-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 D3790_05300 16015bfa1e2a5d3abe8636a4eb55345a 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 417 4.6E-235 T 01-11-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 D3790_05300 16015bfa1e2a5d3abe8636a4eb55345a 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 304 323 - T 01-11-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 D3790_05300 16015bfa1e2a5d3abe8636a4eb55345a 417 SMART SM01329 29 413 6.3E-176 T 01-11-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 D3790_05300 16015bfa1e2a5d3abe8636a4eb55345a 417 Gene3D G3DSA:3.40.718.10 1 417 2.7E-186 T 01-11-2018 D3790_18565 63f2e3dcda5f25994f4824caf5857cb7 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 4.0E-125 T 01-11-2018 D3790_18565 63f2e3dcda5f25994f4824caf5857cb7 313 SUPERFAMILY SSF52317 17 297 1.23E-99 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_18565 63f2e3dcda5f25994f4824caf5857cb7 313 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 40.598 T 01-11-2018 IPR033752 MetA family D3790_18565 63f2e3dcda5f25994f4824caf5857cb7 313 Gene3D G3DSA:3.40.50.880 1 301 7.3E-119 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_18565 63f2e3dcda5f25994f4824caf5857cb7 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 1.2E-154 T 01-11-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 D3790_18565 63f2e3dcda5f25994f4824caf5857cb7 313 PIRSF PIRSF000450 1 307 7.3E-144 T 01-11-2018 IPR033752 MetA family D3790_18565 63f2e3dcda5f25994f4824caf5857cb7 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.2E-130 T 01-11-2018 IPR033752 MetA family D3790_10320 323c896d955c52242c010418f43581f3 318 Gene3D G3DSA:3.40.50.2000 127 284 1.9E-7 T 01-11-2018 D3790_10320 323c896d955c52242c010418f43581f3 318 SUPERFAMILY SSF53756 212 292 3.14E-8 T 01-11-2018 D3790_03215 39ca82c535e0ecc90866af25abc9fe29 402 SUPERFAMILY SSF56601 15 291 6.22E-77 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like D3790_03215 39ca82c535e0ecc90866af25abc9fe29 402 Gene3D G3DSA:3.40.710.10 30 290 5.1E-90 T 01-11-2018 D3790_03215 39ca82c535e0ecc90866af25abc9fe29 402 Gene3D G3DSA:2.60.410.10 291 382 2.9E-27 T 01-11-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D3790_03215 39ca82c535e0ecc90866af25abc9fe29 402 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 291 382 6.1E-24 T 01-11-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D3790_03215 39ca82c535e0ecc90866af25abc9fe29 402 SMART SM00936 291 382 5.4E-32 T 01-11-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D3790_03215 39ca82c535e0ecc90866af25abc9fe29 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 71 82 1.3E-16 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 D3790_03215 39ca82c535e0ecc90866af25abc9fe29 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 130 147 1.3E-16 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 D3790_03215 39ca82c535e0ecc90866af25abc9fe29 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 157 170 1.3E-16 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 D3790_03215 39ca82c535e0ecc90866af25abc9fe29 402 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 38 271 1.3E-97 T 01-11-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 D3790_03215 39ca82c535e0ecc90866af25abc9fe29 402 SUPERFAMILY SSF69189 291 384 7.06E-25 T 01-11-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D3790_12395 61974741e15f243b16d2adde385a4e8e 293 Gene3D G3DSA:3.40.50.150 101 293 3.3E-55 T 01-11-2018 D3790_12395 61974741e15f243b16d2adde385a4e8e 293 SUPERFAMILY SSF53335 44 272 1.76E-42 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_12395 61974741e15f243b16d2adde385a4e8e 293 PIRSF PIRSF000401 1 293 2.4E-92 T 01-11-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 D3790_12395 61974741e15f243b16d2adde385a4e8e 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 1.1E-113 T 01-11-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 D3790_12395 61974741e15f243b16d2adde385a4e8e 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 5.2E-100 T 01-11-2018 D3790_12395 61974741e15f243b16d2adde385a4e8e 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 32.323 T 01-11-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 D3790_11200 276ae8419263cee4ce6638ddad6e9226 408 Gene3D G3DSA:1.20.1250.20 16 402 1.6E-21 T 01-11-2018 D3790_11200 276ae8419263cee4ce6638ddad6e9226 408 SUPERFAMILY SSF103473 11 403 9.55E-28 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_11200 276ae8419263cee4ce6638ddad6e9226 408 Pfam PF07690 Major Facilitator Superfamily 22 341 6.5E-17 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_13425 101eb53ee7bc64fac657f963a38ec5ba 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 01-11-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_13425 101eb53ee7bc64fac657f963a38ec5ba 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 24.597 T 01-11-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13425 101eb53ee7bc64fac657f963a38ec5ba 102 SUPERFAMILY SSF141091 1 101 4.19E-38 T 01-11-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13425 101eb53ee7bc64fac657f963a38ec5ba 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 5.0E-40 T 01-11-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13425 101eb53ee7bc64fac657f963a38ec5ba 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 5.5E-45 T 01-11-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_12655 474a2403d659b2455f43ab8670e9606b 215 SMART SM00855 3 157 4.5E-24 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D3790_12655 474a2403d659b2455f43ab8670e9606b 215 SUPERFAMILY SSF53254 1 208 5.11E-57 T 01-11-2018 IPR029033 Histidine phosphatase superfamily D3790_12655 474a2403d659b2455f43ab8670e9606b 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 49.881 T 01-11-2018 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 D3790_12655 474a2403d659b2455f43ab8670e9606b 215 Gene3D G3DSA:3.40.50.1240 1 211 3.2E-57 T 01-11-2018 IPR029033 Histidine phosphatase superfamily D3790_12655 474a2403d659b2455f43ab8670e9606b 215 PIRSF PIRSF000709 2 136 2.2E-11 T 01-11-2018 D3790_12655 474a2403d659b2455f43ab8670e9606b 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 1.1E-57 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D3790_12655 474a2403d659b2455f43ab8670e9606b 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 01-11-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 D3790_02895 c274f8ab1ad9445c9845c5b60331ae5d 367 Gene3D G3DSA:2.30.130.10 266 367 4.3E-29 T 01-11-2018 IPR036974 PUA domain superfamily GO:0003723 D3790_02895 c274f8ab1ad9445c9845c5b60331ae5d 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 263 37.259 T 01-11-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 D3790_02895 c274f8ab1ad9445c9845c5b60331ae5d 367 SUPERFAMILY SSF53633 6 256 5.37E-68 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily D3790_02895 c274f8ab1ad9445c9845c5b60331ae5d 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 01-11-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 D3790_02895 c274f8ab1ad9445c9845c5b60331ae5d 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 365 2.0E-152 T 01-11-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 D3790_02895 c274f8ab1ad9445c9845c5b60331ae5d 367 SUPERFAMILY SSF88697 276 366 1.66E-21 T 01-11-2018 IPR015947 PUA-like superfamily D3790_02895 c274f8ab1ad9445c9845c5b60331ae5d 367 PIRSF PIRSF000729 1 367 1.4E-143 T 01-11-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 D3790_02895 c274f8ab1ad9445c9845c5b60331ae5d 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 8.3E-57 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 D3790_02895 c274f8ab1ad9445c9845c5b60331ae5d 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 8.3E-57 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 D3790_02895 c274f8ab1ad9445c9845c5b60331ae5d 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 8.3E-57 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 D3790_02895 c274f8ab1ad9445c9845c5b60331ae5d 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 8.3E-57 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 D3790_02895 c274f8ab1ad9445c9845c5b60331ae5d 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 8.3E-57 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 D3790_02895 c274f8ab1ad9445c9845c5b60331ae5d 367 SMART SM00359 276 359 2.0E-18 T 01-11-2018 IPR002478 PUA domain GO:0003723 D3790_02895 c274f8ab1ad9445c9845c5b60331ae5d 367 Gene3D G3DSA:3.40.1160.10 2 257 5.1E-89 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily D3790_02895 c274f8ab1ad9445c9845c5b60331ae5d 367 Pfam PF01472 PUA domain 276 350 5.1E-20 T 01-11-2018 IPR002478 PUA domain GO:0003723 D3790_02895 c274f8ab1ad9445c9845c5b60331ae5d 367 Pfam PF00696 Amino acid kinase family 6 234 4.9E-43 T 01-11-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D3790_07490 052b475c0ef7bda97a35c5dcebfc8ddf 511 Pfam PF03023 MviN-like protein 28 478 4.8E-154 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D3790_07490 052b475c0ef7bda97a35c5dcebfc8ddf 511 PRINTS PR01806 Virulence factor MviN signature 33 52 1.3E-84 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D3790_07490 052b475c0ef7bda97a35c5dcebfc8ddf 511 PRINTS PR01806 Virulence factor MviN signature 157 178 1.3E-84 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D3790_07490 052b475c0ef7bda97a35c5dcebfc8ddf 511 PRINTS PR01806 Virulence factor MviN signature 409 426 1.3E-84 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D3790_07490 052b475c0ef7bda97a35c5dcebfc8ddf 511 PRINTS PR01806 Virulence factor MviN signature 133 157 1.3E-84 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D3790_07490 052b475c0ef7bda97a35c5dcebfc8ddf 511 PRINTS PR01806 Virulence factor MviN signature 52 68 1.3E-84 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D3790_07490 052b475c0ef7bda97a35c5dcebfc8ddf 511 PRINTS PR01806 Virulence factor MviN signature 357 376 1.3E-84 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D3790_07490 052b475c0ef7bda97a35c5dcebfc8ddf 511 PRINTS PR01806 Virulence factor MviN signature 259 285 1.3E-84 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D3790_07490 052b475c0ef7bda97a35c5dcebfc8ddf 511 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 20.275 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D3790_07490 052b475c0ef7bda97a35c5dcebfc8ddf 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 505 1.8E-168 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D3790_07490 052b475c0ef7bda97a35c5dcebfc8ddf 511 PIRSF PIRSF002869 1 511 4.1E-175 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D3790_11385 d415441d4e227f56cc67aa114110f3f7 427 ProSitePatterns PS01219 Ammonium transporters signature. 182 207 - T 01-11-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 D3790_11385 d415441d4e227f56cc67aa114110f3f7 427 SUPERFAMILY SSF111352 27 407 3.79E-124 T 01-11-2018 D3790_11385 d415441d4e227f56cc67aa114110f3f7 427 Gene3D G3DSA:1.10.3430.10 24 407 9.0E-139 T 01-11-2018 IPR029020 Ammonium/urea transporter D3790_11385 d415441d4e227f56cc67aa114110f3f7 427 Pfam PF00909 Ammonium Transporter Family 33 426 8.4E-122 T 01-11-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 D3790_11385 d415441d4e227f56cc67aa114110f3f7 427 TIGRFAM TIGR00836 amt: ammonium transporter 31 426 3.4E-131 T 01-11-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 D3790_11385 d415441d4e227f56cc67aa114110f3f7 427 PRINTS PR00342 Rhesus blood group protein signature 307 325 5.4E-6 T 01-11-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 D3790_11385 d415441d4e227f56cc67aa114110f3f7 427 PRINTS PR00342 Rhesus blood group protein signature 252 274 5.4E-6 T 01-11-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 D3790_11385 d415441d4e227f56cc67aa114110f3f7 427 PRINTS PR00342 Rhesus blood group protein signature 221 239 5.4E-6 T 01-11-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 D3790_11385 d415441d4e227f56cc67aa114110f3f7 427 PRINTS PR00342 Rhesus blood group protein signature 126 142 5.4E-6 T 01-11-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 D3790_18210 c6c253acdc7169cffcb001a5b03559fb 1135 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1094 0.0 T 01-11-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 D3790_18210 c6c253acdc7169cffcb001a5b03559fb 1135 SUPERFAMILY SSF52540 1 347 4.35E-123 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_18210 c6c253acdc7169cffcb001a5b03559fb 1135 Gene3D G3DSA:1.10.10.990 867 937 1.0E-25 T 01-11-2018 D3790_18210 c6c253acdc7169cffcb001a5b03559fb 1135 PIRSF PIRSF000980 1 1132 0.0 T 01-11-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 D3790_18210 c6c253acdc7169cffcb001a5b03559fb 1135 Gene3D G3DSA:3.40.50.300 334 809 4.7E-197 T 01-11-2018 D3790_18210 c6c253acdc7169cffcb001a5b03559fb 1135 SUPERFAMILY SSF52980 822 1125 2.36E-85 T 01-11-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 D3790_18210 c6c253acdc7169cffcb001a5b03559fb 1135 SUPERFAMILY SSF52540 360 813 5.63E-102 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_18210 c6c253acdc7169cffcb001a5b03559fb 1135 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1132 20.65 T 01-11-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 D3790_18210 c6c253acdc7169cffcb001a5b03559fb 1135 Gene3D G3DSA:1.10.10.160 79 187 9.8E-126 T 01-11-2018 IPR013986 DExx box DNA helicase domain superfamily D3790_18210 c6c253acdc7169cffcb001a5b03559fb 1135 Gene3D G3DSA:3.40.50.10930 4 315 9.8E-126 T 01-11-2018 D3790_18210 c6c253acdc7169cffcb001a5b03559fb 1135 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 807 2.8E-295 T 01-11-2018 D3790_18210 c6c253acdc7169cffcb001a5b03559fb 1135 Gene3D G3DSA:1.10.486.10 456 664 4.7E-197 T 01-11-2018 D3790_14460 2dbd1e4dc6e0fac6ca15a0c02fd45df0 142 Gene3D G3DSA:3.30.70.1290 11 142 3.4E-40 T 01-11-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D3790_14460 2dbd1e4dc6e0fac6ca15a0c02fd45df0 142 Pfam PF01797 Transposase IS200 like 19 138 1.8E-38 T 01-11-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D3790_14460 2dbd1e4dc6e0fac6ca15a0c02fd45df0 142 SMART SM01321 19 138 2.1E-39 T 01-11-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D3790_14460 2dbd1e4dc6e0fac6ca15a0c02fd45df0 142 SUPERFAMILY SSF143422 10 138 3.4E-43 T 01-11-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D3790_13090 2dbd1e4dc6e0fac6ca15a0c02fd45df0 142 Gene3D G3DSA:3.30.70.1290 11 142 3.4E-40 T 01-11-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D3790_13090 2dbd1e4dc6e0fac6ca15a0c02fd45df0 142 Pfam PF01797 Transposase IS200 like 19 138 1.8E-38 T 01-11-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D3790_13090 2dbd1e4dc6e0fac6ca15a0c02fd45df0 142 SMART SM01321 19 138 2.1E-39 T 01-11-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D3790_13090 2dbd1e4dc6e0fac6ca15a0c02fd45df0 142 SUPERFAMILY SSF143422 10 138 3.4E-43 T 01-11-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D3790_17790 2dbd1e4dc6e0fac6ca15a0c02fd45df0 142 Gene3D G3DSA:3.30.70.1290 11 142 3.4E-40 T 01-11-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D3790_17790 2dbd1e4dc6e0fac6ca15a0c02fd45df0 142 Pfam PF01797 Transposase IS200 like 19 138 1.8E-38 T 01-11-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D3790_17790 2dbd1e4dc6e0fac6ca15a0c02fd45df0 142 SMART SM01321 19 138 2.1E-39 T 01-11-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D3790_17790 2dbd1e4dc6e0fac6ca15a0c02fd45df0 142 SUPERFAMILY SSF143422 10 138 3.4E-43 T 01-11-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D3790_12405 9b7fa5ed5bfad34f046ca87921ffe308 98 PIRSF PIRSF002097 1 98 7.3E-46 T 01-11-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 D3790_12405 9b7fa5ed5bfad34f046ca87921ffe308 98 SUPERFAMILY SSF46689 4 98 3.58E-27 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_12405 9b7fa5ed5bfad34f046ca87921ffe308 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.3E-34 T 01-11-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 D3790_12405 9b7fa5ed5bfad34f046ca87921ffe308 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.3E-34 T 01-11-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 D3790_12405 9b7fa5ed5bfad34f046ca87921ffe308 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.3E-34 T 01-11-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 D3790_12405 9b7fa5ed5bfad34f046ca87921ffe308 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.3E-34 T 01-11-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 D3790_12405 9b7fa5ed5bfad34f046ca87921ffe308 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D3790_12405 9b7fa5ed5bfad34f046ca87921ffe308 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D3790_12405 9b7fa5ed5bfad34f046ca87921ffe308 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.625 T 01-11-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 D3790_12405 9b7fa5ed5bfad34f046ca87921ffe308 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.8E-14 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D3790_12405 9b7fa5ed5bfad34f046ca87921ffe308 98 Gene3D G3DSA:1.10.10.60 1 98 1.7E-35 T 01-11-2018 D3790_12345 e51d09ddf13a641bfcbe7fe98a7904c7 195 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 31.111 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 D3790_12345 e51d09ddf13a641bfcbe7fe98a7904c7 195 PIRSF PIRSF006305 1 191 3.1E-51 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 D3790_12345 e51d09ddf13a641bfcbe7fe98a7904c7 195 Gene3D G3DSA:3.90.950.10 2 189 7.8E-72 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D3790_12345 e51d09ddf13a641bfcbe7fe98a7904c7 195 SUPERFAMILY SSF52972 2 184 5.69E-62 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D3790_12345 e51d09ddf13a641bfcbe7fe98a7904c7 195 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 181 2.1E-62 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 D3790_12345 e51d09ddf13a641bfcbe7fe98a7904c7 195 Pfam PF02545 Maf-like protein 4 184 1.8E-57 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 D3790_17925 fadb9b687769b98d784cf3fe0b588e21 117 Pfam PF05119 Phage terminase, small subunit 15 110 1.6E-17 T 01-11-2018 IPR006448 Putative phage terminase, small subunit, P27 family D3790_17925 fadb9b687769b98d784cf3fe0b588e21 117 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 6 111 7.6E-16 T 01-11-2018 IPR006448 Putative phage terminase, small subunit, P27 family D3790_05605 8f274119ce60ae3543c36c060196cea3 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 4.1E-41 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_05605 8f274119ce60ae3543c36c060196cea3 321 SUPERFAMILY SSF161098 70 299 3.92E-21 T 01-11-2018 IPR035906 MetI-like superfamily D3790_01605 24d8cc688925831e8d3898109dfe3187 95 SUPERFAMILY SSF47413 3 74 6.47E-29 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_01605 24d8cc688925831e8d3898109dfe3187 95 Pfam PF13693 Winged helix-turn-helix DNA-binding 9 82 7.4E-35 T 01-11-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain D3790_01605 24d8cc688925831e8d3898109dfe3187 95 Gene3D G3DSA:1.10.260.40 4 74 4.7E-32 T 01-11-2018 D3790_16145 a7a45ced353cb62461f6652ca09b5df2 347 Gene3D G3DSA:3.30.450.20 6 110 1.8E-16 T 01-11-2018 D3790_16145 a7a45ced353cb62461f6652ca09b5df2 347 SUPERFAMILY SSF55874 196 344 1.31E-35 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_16145 a7a45ced353cb62461f6652ca09b5df2 347 Gene3D G3DSA:1.10.287.130 113 187 2.7E-15 T 01-11-2018 D3790_16145 a7a45ced353cb62461f6652ca09b5df2 347 SUPERFAMILY SSF55785 8 97 1.4E-5 T 01-11-2018 IPR035965 PAS domain superfamily D3790_16145 a7a45ced353cb62461f6652ca09b5df2 347 SMART SM00091 5 73 4.0E-5 T 01-11-2018 IPR000014 PAS domain D3790_16145 a7a45ced353cb62461f6652ca09b5df2 347 SMART SM00387 231 347 2.3E-28 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_16145 a7a45ced353cb62461f6652ca09b5df2 347 SMART SM00388 127 192 5.6E-15 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_16145 a7a45ced353cb62461f6652ca09b5df2 347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 293 1.5E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_16145 a7a45ced353cb62461f6652ca09b5df2 347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 326 1.5E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_16145 a7a45ced353cb62461f6652ca09b5df2 347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 344 1.5E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_16145 a7a45ced353cb62461f6652ca09b5df2 347 Pfam PF00512 His Kinase A (phospho-acceptor) domain 129 184 6.3E-15 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_16145 a7a45ced353cb62461f6652ca09b5df2 347 SUPERFAMILY SSF47384 121 184 4.71E-13 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D3790_16145 a7a45ced353cb62461f6652ca09b5df2 347 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 233 345 3.2E-16 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_16145 a7a45ced353cb62461f6652ca09b5df2 347 Gene3D G3DSA:3.30.565.10 189 346 3.6E-43 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_00090 0f9c7119c0a3fcfc5de5494f797d9dc8 286 SUPERFAMILY SSF161098 6 275 1.1E-52 T 01-11-2018 IPR035906 MetI-like superfamily D3790_00090 0f9c7119c0a3fcfc5de5494f797d9dc8 286 Gene3D G3DSA:1.10.3720.10 6 281 2.4E-51 T 01-11-2018 IPR035906 MetI-like superfamily D3790_00090 0f9c7119c0a3fcfc5de5494f797d9dc8 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 5.7E-18 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_09980 5de5125b94a5c93c3d599aa460af0862 72 SMART SM00316 4 72 1.2E-6 T 01-11-2018 IPR022967 RNA-binding domain, S1 D3790_09980 5de5125b94a5c93c3d599aa460af0862 72 Gene3D G3DSA:2.40.50.140 1 72 4.5E-33 T 01-11-2018 D3790_09980 5de5125b94a5c93c3d599aa460af0862 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.2E-35 T 01-11-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 D3790_09980 5de5125b94a5c93c3d599aa460af0862 72 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 1.5E-25 T 01-11-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 D3790_09980 5de5125b94a5c93c3d599aa460af0862 72 SUPERFAMILY SSF50249 1 70 3.23E-27 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_09980 5de5125b94a5c93c3d599aa460af0862 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 25.448 T 01-11-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 D3790_09885 33412bfb6d08bbc390ab2da1567a18f8 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 361 50.466 T 01-11-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 D3790_09885 33412bfb6d08bbc390ab2da1567a18f8 362 Pfam PF00266 Aminotransferase class-V 4 350 5.5E-67 T 01-11-2018 IPR000192 Aminotransferase class V domain D3790_09885 33412bfb6d08bbc390ab2da1567a18f8 362 PIRSF PIRSF000525 1 362 2.6E-147 T 01-11-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 D3790_09885 33412bfb6d08bbc390ab2da1567a18f8 362 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 208 - T 01-11-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site D3790_09885 33412bfb6d08bbc390ab2da1567a18f8 362 Gene3D G3DSA:3.40.640.10 17 258 1.6E-91 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_09885 33412bfb6d08bbc390ab2da1567a18f8 362 Gene3D G3DSA:3.90.1150.10 259 362 5.0E-36 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_09885 33412bfb6d08bbc390ab2da1567a18f8 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 360 6.2E-153 T 01-11-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 D3790_09885 33412bfb6d08bbc390ab2da1567a18f8 362 SUPERFAMILY SSF53383 1 360 3.26E-116 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_07575 523a391876d7e1f148e74b01779240bb 330 Gene3D G3DSA:3.60.110.10 1 284 4.9E-105 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D3790_07575 523a391876d7e1f148e74b01779240bb 330 Pfam PF00795 Carbon-nitrogen hydrolase 6 278 3.3E-45 T 01-11-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 D3790_07575 523a391876d7e1f148e74b01779240bb 330 TIGRFAM TIGR04048 nitrile_sll0784: putative nitrilase, sll0784 family 3 303 1.6E-162 T 01-11-2018 IPR023919 Nitrilase-related, sll0784 D3790_07575 523a391876d7e1f148e74b01779240bb 330 SUPERFAMILY SSF56317 3 300 1.44E-68 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D3790_17500 9ce7db19d634fba0365e8155707e412b 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 12 154 1.1E-37 T 01-11-2018 IPR002178 PTS EIIA type-2 domain D3790_17500 9ce7db19d634fba0365e8155707e412b 155 Gene3D G3DSA:3.40.930.10 1 155 7.3E-57 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 D3790_17500 9ce7db19d634fba0365e8155707e412b 155 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 57 73 - T 01-11-2018 IPR002178 PTS EIIA type-2 domain D3790_17500 9ce7db19d634fba0365e8155707e412b 155 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 9 155 4.4E-56 T 01-11-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 D3790_17500 9ce7db19d634fba0365e8155707e412b 155 SUPERFAMILY SSF55804 9 155 3.92E-40 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 D3790_04560 3b99d84f6696546bfc13c557bd70d81d 256 SMART SM00644 7 158 4.1E-28 T 01-11-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D3790_04560 3b99d84f6696546bfc13c557bd70d81d 256 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 18 159 2.6E-24 T 01-11-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D3790_04560 3b99d84f6696546bfc13c557bd70d81d 256 SUPERFAMILY SSF55846 9 174 2.09E-44 T 01-11-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D3790_04560 3b99d84f6696546bfc13c557bd70d81d 256 SUPERFAMILY SSF47090 174 253 8.24E-23 T 01-11-2018 IPR036365 PGBD-like superfamily D3790_04560 3b99d84f6696546bfc13c557bd70d81d 256 Gene3D G3DSA:1.10.101.10 173 253 1.4E-28 T 01-11-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 D3790_04560 3b99d84f6696546bfc13c557bd70d81d 256 Gene3D G3DSA:3.40.80.10 17 172 1.5E-48 T 01-11-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D3790_10470 5446e4427c490d1515649c13b9672e77 525 Gene3D G3DSA:3.40.50.300 4 239 4.4E-56 T 01-11-2018 D3790_10470 5446e4427c490d1515649c13b9672e77 525 SUPERFAMILY SSF52317 257 463 2.52E-36 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_10470 5446e4427c490d1515649c13b9672e77 525 Gene3D G3DSA:3.40.50.880 254 390 1.8E-24 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_10470 5446e4427c490d1515649c13b9672e77 525 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 228 1.3E-19 T 01-11-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain D3790_10470 5446e4427c490d1515649c13b9672e77 525 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 256 453 5.1E-57 T 01-11-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 D3790_10470 5446e4427c490d1515649c13b9672e77 525 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 509 182.766 T 01-11-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 D3790_10470 5446e4427c490d1515649c13b9672e77 525 SUPERFAMILY SSF52540 1 229 4.11E-52 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_10470 5446e4427c490d1515649c13b9672e77 525 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 500 1.8E-159 T 01-11-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 D3790_08950 e7b85acf52c2a05bf69ff0a4bb26662a 352 SUPERFAMILY SSF52821 116 271 3.54E-33 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily D3790_08950 e7b85acf52c2a05bf69ff0a4bb26662a 352 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 276 39.125 T 01-11-2018 IPR020936 Uncharacterised protein family UPF0176 D3790_08950 e7b85acf52c2a05bf69ff0a4bb26662a 352 Pfam PF00581 Rhodanese-like domain 138 233 1.1E-14 T 01-11-2018 IPR001763 Rhodanese-like domain D3790_08950 e7b85acf52c2a05bf69ff0a4bb26662a 352 Pfam PF12368 Rhodanase C-terminal 246 307 6.9E-17 T 01-11-2018 IPR022111 Rhodanase, C-terminal D3790_08950 e7b85acf52c2a05bf69ff0a4bb26662a 352 Gene3D G3DSA:3.30.70.100 13 118 1.7E-16 T 01-11-2018 D3790_08950 e7b85acf52c2a05bf69ff0a4bb26662a 352 SMART SM00450 136 237 1.2E-26 T 01-11-2018 IPR001763 Rhodanese-like domain D3790_08950 e7b85acf52c2a05bf69ff0a4bb26662a 352 Gene3D G3DSA:3.40.250.10 123 274 2.2E-45 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily D3790_11425 fe485385294f495b2e9a3647f3bdc58a 399 Gene3D G3DSA:2.40.420.20 307 376 2.4E-109 T 01-11-2018 D3790_11425 fe485385294f495b2e9a3647f3bdc58a 399 Gene3D G3DSA:2.40.30.170 55 306 2.4E-109 T 01-11-2018 D3790_11425 fe485385294f495b2e9a3647f3bdc58a 399 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 296 5.5E-11 T 01-11-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D3790_11425 fe485385294f495b2e9a3647f3bdc58a 399 Pfam PF00529 HlyD membrane-fusion protein of T1SS 64 363 4.2E-11 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D3790_11425 fe485385294f495b2e9a3647f3bdc58a 399 Gene3D G3DSA:1.10.287.470 102 175 2.4E-109 T 01-11-2018 D3790_11425 fe485385294f495b2e9a3647f3bdc58a 399 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 378 2.0E-80 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D3790_11425 fe485385294f495b2e9a3647f3bdc58a 399 Gene3D G3DSA:2.40.50.100 67 211 2.4E-109 T 01-11-2018 D3790_11425 fe485385294f495b2e9a3647f3bdc58a 399 SUPERFAMILY SSF111369 55 303 1.15E-83 T 01-11-2018 D3790_12055 1d01a13edf807a70cc8e327a3c12c0fc 218 Gene3D G3DSA:3.40.50.1000 6 216 7.8E-51 T 01-11-2018 IPR023214 HAD superfamily D3790_12055 1d01a13edf807a70cc8e327a3c12c0fc 218 Pfam PF12710 haloacid dehalogenase-like hydrolase 6 191 4.5E-21 T 01-11-2018 D3790_12055 1d01a13edf807a70cc8e327a3c12c0fc 218 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 192 7.8E-22 T 01-11-2018 D3790_12055 1d01a13edf807a70cc8e327a3c12c0fc 218 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 203 4.7E-33 T 01-11-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like D3790_12055 1d01a13edf807a70cc8e327a3c12c0fc 218 Gene3D G3DSA:1.20.1440.100 17 88 7.8E-51 T 01-11-2018 D3790_12055 1d01a13edf807a70cc8e327a3c12c0fc 218 SUPERFAMILY SSF56784 1 211 3.4E-24 T 01-11-2018 IPR036412 HAD-like superfamily D3790_08345 7aded3aa7af91d466a693506a60e039a 331 Gene3D G3DSA:1.10.3470.10 5 329 5.2E-105 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_08345 7aded3aa7af91d466a693506a60e039a 331 Pfam PF01032 FecCD transport family 25 327 4.7E-85 T 01-11-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 D3790_08345 7aded3aa7af91d466a693506a60e039a 331 SUPERFAMILY SSF81345 9 327 2.88E-83 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_08345 7aded3aa7af91d466a693506a60e039a 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 4 330 31.495 T 01-11-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 D3790_06415 67a1867fbb19799a20c1d9ef5340b3f8 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 9.1E-6 T 01-11-2018 D3790_06415 67a1867fbb19799a20c1d9ef5340b3f8 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 9.1E-6 T 01-11-2018 D3790_06415 67a1867fbb19799a20c1d9ef5340b3f8 192 SUPERFAMILY SSF52317 3 190 1.47E-46 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_06415 67a1867fbb19799a20c1d9ef5340b3f8 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 185 6.9E-55 T 01-11-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D3790_06415 67a1867fbb19799a20c1d9ef5340b3f8 192 Pfam PF00117 Glutamine amidotransferase class-I 6 188 1.7E-46 T 01-11-2018 IPR017926 Glutamine amidotransferase D3790_06415 67a1867fbb19799a20c1d9ef5340b3f8 192 Gene3D G3DSA:3.40.50.880 1 191 1.1E-58 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_06415 67a1867fbb19799a20c1d9ef5340b3f8 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 6.7E-14 T 01-11-2018 D3790_06415 67a1867fbb19799a20c1d9ef5340b3f8 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 6.7E-14 T 01-11-2018 D3790_06415 67a1867fbb19799a20c1d9ef5340b3f8 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 6.7E-14 T 01-11-2018 D3790_06415 67a1867fbb19799a20c1d9ef5340b3f8 192 PRINTS PR00097 Anthranilate synthase component II signature 52 61 7.6E-35 T 01-11-2018 D3790_06415 67a1867fbb19799a20c1d9ef5340b3f8 192 PRINTS PR00097 Anthranilate synthase component II signature 4 18 7.6E-35 T 01-11-2018 D3790_06415 67a1867fbb19799a20c1d9ef5340b3f8 192 PRINTS PR00097 Anthranilate synthase component II signature 124 136 7.6E-35 T 01-11-2018 D3790_06415 67a1867fbb19799a20c1d9ef5340b3f8 192 PRINTS PR00097 Anthranilate synthase component II signature 104 112 7.6E-35 T 01-11-2018 D3790_06415 67a1867fbb19799a20c1d9ef5340b3f8 192 PRINTS PR00097 Anthranilate synthase component II signature 166 179 7.6E-35 T 01-11-2018 D3790_06415 67a1867fbb19799a20c1d9ef5340b3f8 192 PRINTS PR00097 Anthranilate synthase component II signature 79 90 7.6E-35 T 01-11-2018 D3790_11680 c8025e9156da2f65b15680c391912bb2 285 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 64 3.0E-8 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D3790_11680 c8025e9156da2f65b15680c391912bb2 285 Hamap MF_00158 Pantothenate synthetase [panC]. 2 281 38.356 T 01-11-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 D3790_11680 c8025e9156da2f65b15680c391912bb2 285 Pfam PF02569 Pantoate-beta-alanine ligase 3 279 7.7E-99 T 01-11-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 D3790_11680 c8025e9156da2f65b15680c391912bb2 285 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 1.0E-109 T 01-11-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 D3790_11680 c8025e9156da2f65b15680c391912bb2 285 Gene3D G3DSA:3.40.50.620 1 180 3.9E-77 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_11680 c8025e9156da2f65b15680c391912bb2 285 Gene3D G3DSA:3.30.1300.10 181 284 2.5E-29 T 01-11-2018 D3790_11680 c8025e9156da2f65b15680c391912bb2 285 SUPERFAMILY SSF52374 1 282 2.61E-101 T 01-11-2018 D3790_00570 2dc2c2564a027f44ba0e18fd86a1f9ff 95 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 3 95 5.3E-42 T 01-11-2018 IPR014056 Addiction module killer protein, predicted D3790_00570 2dc2c2564a027f44ba0e18fd86a1f9ff 95 PIRSF PIRSF028744 1 95 3.0E-43 T 01-11-2018 IPR014056 Addiction module killer protein, predicted D3790_00570 2dc2c2564a027f44ba0e18fd86a1f9ff 95 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 92 1.7E-8 T 01-11-2018 IPR009241 Toxin HigB-like D3790_13415 35a3a4d7db4c156647c68d5533fe327a 388 PIRSF PIRSF002401 1 377 1.9E-142 T 01-11-2018 IPR035101 GTP-binding protein, Obg-type D3790_13415 35a3a4d7db4c156647c68d5533fe327a 388 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 6.4E-149 T 01-11-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 D3790_13415 35a3a4d7db4c156647c68d5533fe327a 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.5E-34 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_13415 35a3a4d7db4c156647c68d5533fe327a 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.5E-34 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_13415 35a3a4d7db4c156647c68d5533fe327a 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.5E-34 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_13415 35a3a4d7db4c156647c68d5533fe327a 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.5E-34 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_13415 35a3a4d7db4c156647c68d5533fe327a 388 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 01-11-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 D3790_13415 35a3a4d7db4c156647c68d5533fe327a 388 Gene3D G3DSA:2.70.210.12 1 158 1.2E-63 T 01-11-2018 IPR036726 GTP1/OBG domain superfamily D3790_13415 35a3a4d7db4c156647c68d5533fe327a 388 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.764 T 01-11-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 D3790_13415 35a3a4d7db4c156647c68d5533fe327a 388 Pfam PF01018 GTP1/OBG 4 157 1.8E-59 T 01-11-2018 IPR006169 GTP1/OBG domain D3790_13415 35a3a4d7db4c156647c68d5533fe327a 388 SUPERFAMILY SSF52540 151 340 3.25E-50 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_13415 35a3a4d7db4c156647c68d5533fe327a 388 SUPERFAMILY SSF82051 2 157 4.71E-58 T 01-11-2018 IPR036726 GTP1/OBG domain superfamily D3790_13415 35a3a4d7db4c156647c68d5533fe327a 388 Gene3D G3DSA:3.40.50.300 159 338 5.9E-55 T 01-11-2018 D3790_13415 35a3a4d7db4c156647c68d5533fe327a 388 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.3E-24 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_16875 699489b06d2c738f58a940a0d0b62663 187 SUPERFAMILY SSF52218 11 181 7.45E-41 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_16875 699489b06d2c738f58a940a0d0b62663 187 Pfam PF02525 Flavodoxin-like fold 11 177 3.2E-36 T 01-11-2018 IPR003680 Flavodoxin-like fold D3790_16875 699489b06d2c738f58a940a0d0b62663 187 Gene3D G3DSA:3.40.50.360 11 182 3.4E-47 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_16875 699489b06d2c738f58a940a0d0b62663 187 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 6 186 49.579 T 01-11-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 D3790_02830 5bbbe0dd1c4c3a43b579ffc7b03c2c7a 365 Pfam PF13808 DDE_Tnp_1-associated 4 91 3.1E-23 T 01-11-2018 IPR032806 H repeat-associated protein, N-terminal D3790_02830 5bbbe0dd1c4c3a43b579ffc7b03c2c7a 365 Pfam PF01609 Transposase DDE domain 99 334 1.1E-22 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_02660 5bbbe0dd1c4c3a43b579ffc7b03c2c7a 365 Pfam PF13808 DDE_Tnp_1-associated 4 91 3.1E-23 T 01-11-2018 IPR032806 H repeat-associated protein, N-terminal D3790_02660 5bbbe0dd1c4c3a43b579ffc7b03c2c7a 365 Pfam PF01609 Transposase DDE domain 99 334 1.1E-22 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_17875 5bbbe0dd1c4c3a43b579ffc7b03c2c7a 365 Pfam PF13808 DDE_Tnp_1-associated 4 91 3.1E-23 T 01-11-2018 IPR032806 H repeat-associated protein, N-terminal D3790_17875 5bbbe0dd1c4c3a43b579ffc7b03c2c7a 365 Pfam PF01609 Transposase DDE domain 99 334 1.1E-22 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_00270 5bbbe0dd1c4c3a43b579ffc7b03c2c7a 365 Pfam PF13808 DDE_Tnp_1-associated 4 91 3.1E-23 T 01-11-2018 IPR032806 H repeat-associated protein, N-terminal D3790_00270 5bbbe0dd1c4c3a43b579ffc7b03c2c7a 365 Pfam PF01609 Transposase DDE domain 99 334 1.1E-22 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_10285 5bbbe0dd1c4c3a43b579ffc7b03c2c7a 365 Pfam PF13808 DDE_Tnp_1-associated 4 91 3.1E-23 T 01-11-2018 IPR032806 H repeat-associated protein, N-terminal D3790_10285 5bbbe0dd1c4c3a43b579ffc7b03c2c7a 365 Pfam PF01609 Transposase DDE domain 99 334 1.1E-22 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_12715 18edef61189f73ba2571214c728fbecb 256 Pfam PF00005 ABC transporter 21 181 1.1E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_12715 18edef61189f73ba2571214c728fbecb 256 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_12715 18edef61189f73ba2571214c728fbecb 256 Gene3D G3DSA:3.40.50.300 4 254 3.3E-61 T 01-11-2018 D3790_12715 18edef61189f73ba2571214c728fbecb 256 SMART SM00382 30 230 8.9E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_12715 18edef61189f73ba2571214c728fbecb 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 253 7.7E-10 T 01-11-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal D3790_12715 18edef61189f73ba2571214c728fbecb 256 SUPERFAMILY SSF52540 4 253 3.94E-62 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_19285 3b228f807447843934eb3d39898c7591 281 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 1 270 4.3E-44 T 01-11-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system D3790_11520 f0df2b4a2654f12446144e0a30172ba9 158 PIRSF PIRSF006181 1 158 1.3E-54 T 01-11-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC D3790_11520 f0df2b4a2654f12446144e0a30172ba9 158 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 1.7E-54 T 01-11-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC D3790_11520 f0df2b4a2654f12446144e0a30172ba9 158 Pfam PF04073 Aminoacyl-tRNA editing domain 31 145 2.0E-23 T 01-11-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 D3790_11520 f0df2b4a2654f12446144e0a30172ba9 158 Gene3D G3DSA:3.90.960.10 1 157 2.0E-59 T 01-11-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 D3790_11520 f0df2b4a2654f12446144e0a30172ba9 158 SUPERFAMILY SSF55826 2 155 2.49E-43 T 01-11-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 D3790_19670 3f6d927050e1bfe3e15452d8973c641e 383 Pfam PF01103 Surface antigen 100 383 1.8E-11 T 01-11-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 D3790_19670 3f6d927050e1bfe3e15452d8973c641e 383 SUPERFAMILY SSF56935 79 375 2.38E-6 T 01-11-2018 D3790_19670 3f6d927050e1bfe3e15452d8973c641e 383 Gene3D G3DSA:2.40.160.50 189 382 4.2E-9 T 01-11-2018 D3790_14180 4adb988d7bb181520f2ecc5da19ce964 177 Gene3D G3DSA:3.90.930.12 83 177 2.4E-40 T 01-11-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14180 4adb988d7bb181520f2ecc5da19ce964 177 Pfam PF00347 Ribosomal protein L6 11 82 1.2E-18 T 01-11-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14180 4adb988d7bb181520f2ecc5da19ce964 177 Pfam PF00347 Ribosomal protein L6 90 164 1.1E-18 T 01-11-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14180 4adb988d7bb181520f2ecc5da19ce964 177 PIRSF PIRSF002162 1 177 4.5E-44 T 01-11-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14180 4adb988d7bb181520f2ecc5da19ce964 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.0E-73 T 01-11-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 D3790_14180 4adb988d7bb181520f2ecc5da19ce964 177 SUPERFAMILY SSF56053 2 82 5.1E-23 T 01-11-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14180 4adb988d7bb181520f2ecc5da19ce964 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.1E-33 T 01-11-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 D3790_14180 4adb988d7bb181520f2ecc5da19ce964 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.1E-33 T 01-11-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 D3790_14180 4adb988d7bb181520f2ecc5da19ce964 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.1E-33 T 01-11-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 D3790_14180 4adb988d7bb181520f2ecc5da19ce964 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.182 T 01-11-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 D3790_14180 4adb988d7bb181520f2ecc5da19ce964 177 SUPERFAMILY SSF56053 83 177 2.27E-35 T 01-11-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14180 4adb988d7bb181520f2ecc5da19ce964 177 Gene3D G3DSA:3.90.930.12 1 82 2.8E-30 T 01-11-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14180 4adb988d7bb181520f2ecc5da19ce964 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 01-11-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_13385 9fb9444b236bfc087f33d2d755e07e50 277 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 271 6.8E-107 T 01-11-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 D3790_13385 9fb9444b236bfc087f33d2d755e07e50 277 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 01-11-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D3790_13385 9fb9444b236bfc087f33d2d755e07e50 277 Gene3D G3DSA:3.20.20.20 1 277 3.2E-114 T 01-11-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D3790_13385 9fb9444b236bfc087f33d2d755e07e50 277 Pfam PF00809 Pterin binding enzyme 18 257 1.0E-90 T 01-11-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D3790_13385 9fb9444b236bfc087f33d2d755e07e50 277 SUPERFAMILY SSF51717 7 274 3.14E-107 T 01-11-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D3790_13385 9fb9444b236bfc087f33d2d755e07e50 277 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 01-11-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D3790_04990 62b861e75f1a4447513505c67629c40e 414 Gene3D G3DSA:1.20.1740.10 9 413 3.3E-8 T 01-11-2018 D3790_04990 62b861e75f1a4447513505c67629c40e 414 PIRSF PIRSF006060 309 412 26.0 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D3790_04990 62b861e75f1a4447513505c67629c40e 414 PIRSF PIRSF006060 8 305 2.0E-12 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D3790_04990 62b861e75f1a4447513505c67629c40e 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 2.5E-94 T 01-11-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D3790_04990 62b861e75f1a4447513505c67629c40e 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 2.5E-94 T 01-11-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D3790_04990 62b861e75f1a4447513505c67629c40e 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 2.5E-94 T 01-11-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D3790_04990 62b861e75f1a4447513505c67629c40e 414 PRINTS PR00166 Aromatic amino acid permease signature 19 42 2.5E-94 T 01-11-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D3790_04990 62b861e75f1a4447513505c67629c40e 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 2.5E-94 T 01-11-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D3790_04990 62b861e75f1a4447513505c67629c40e 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 2.5E-94 T 01-11-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D3790_04990 62b861e75f1a4447513505c67629c40e 414 PRINTS PR00166 Aromatic amino acid permease signature 91 111 2.5E-94 T 01-11-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D3790_04990 62b861e75f1a4447513505c67629c40e 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 2.5E-94 T 01-11-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D3790_04990 62b861e75f1a4447513505c67629c40e 414 PRINTS PR00166 Aromatic amino acid permease signature 46 65 2.5E-94 T 01-11-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D3790_04990 62b861e75f1a4447513505c67629c40e 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 16 395 6.6E-144 T 01-11-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D3790_04990 62b861e75f1a4447513505c67629c40e 414 Pfam PF03222 Tryptophan/tyrosine permease family 10 402 1.4E-140 T 01-11-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 D3790_10245 cf0812b78a2ee9ef45b522b03202ac4a 204 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 17 181 9.0E-50 T 01-11-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG D3790_10245 cf0812b78a2ee9ef45b522b03202ac4a 204 SUPERFAMILY SSF102405 16 190 2.14E-57 T 01-11-2018 D3790_10245 cf0812b78a2ee9ef45b522b03202ac4a 204 Gene3D G3DSA:3.40.50.450 8 204 8.1E-70 T 01-11-2018 D3790_10245 cf0812b78a2ee9ef45b522b03202ac4a 204 Pfam PF03641 Possible lysine decarboxylase 61 187 6.2E-39 T 01-11-2018 IPR031100 LOG family D3790_19150 8b1655a830fa6d2ebaf55712794cda81 359 Pfam PF01476 LysM domain 115 156 2.8E-8 T 01-11-2018 IPR018392 LysM domain D3790_19150 8b1655a830fa6d2ebaf55712794cda81 359 Pfam PF01551 Peptidase family M23 259 352 2.6E-30 T 01-11-2018 IPR016047 Peptidase M23 D3790_19150 8b1655a830fa6d2ebaf55712794cda81 359 Gene3D G3DSA:2.70.70.10 202 359 3.1E-37 T 01-11-2018 IPR011055 Duplicated hybrid motif D3790_19150 8b1655a830fa6d2ebaf55712794cda81 359 SMART SM00257 114 158 1.1E-8 T 01-11-2018 IPR018392 LysM domain D3790_19150 8b1655a830fa6d2ebaf55712794cda81 359 SUPERFAMILY SSF51261 114 356 5.75E-52 T 01-11-2018 IPR011055 Duplicated hybrid motif D3790_19150 8b1655a830fa6d2ebaf55712794cda81 359 Gene3D G3DSA:3.10.350.10 113 156 2.1E-10 T 01-11-2018 IPR036779 LysM domain superfamily D3790_05115 4ee7e301db8ed9ac285c02c528845b3b 196 SUPERFAMILY SSF52972 2 185 2.03E-58 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D3790_05115 4ee7e301db8ed9ac285c02c528845b3b 196 Gene3D G3DSA:3.90.950.10 3 194 3.9E-59 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D3790_05115 4ee7e301db8ed9ac285c02c528845b3b 196 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 28.787 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 D3790_05115 4ee7e301db8ed9ac285c02c528845b3b 196 PIRSF PIRSF006305 1 193 4.0E-39 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 D3790_05115 4ee7e301db8ed9ac285c02c528845b3b 196 Pfam PF02545 Maf-like protein 4 184 4.3E-43 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 D3790_05115 4ee7e301db8ed9ac285c02c528845b3b 196 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 184 1.3E-55 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 D3790_13560 c81aabfa1aad199d99e42b44542dd4da 132 SUPERFAMILY SSF54995 1 103 1.44E-37 T 01-11-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13560 c81aabfa1aad199d99e42b44542dd4da 132 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 8.4E-38 T 01-11-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13560 c81aabfa1aad199d99e42b44542dd4da 132 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 01-11-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 D3790_13560 c81aabfa1aad199d99e42b44542dd4da 132 Pfam PF01250 Ribosomal protein S6 3 91 6.6E-28 T 01-11-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13560 c81aabfa1aad199d99e42b44542dd4da 132 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.897 T 01-11-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 D3790_13560 c81aabfa1aad199d99e42b44542dd4da 132 Gene3D G3DSA:3.30.70.60 1 92 3.0E-33 T 01-11-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 D3790_15420 63a229b416af0d7caa0b11ef90430221 146 PRINTS PR00369 Flavodoxin signature 82 92 2.1E-8 T 01-11-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D3790_15420 63a229b416af0d7caa0b11ef90430221 146 PRINTS PR00369 Flavodoxin signature 51 62 2.1E-8 T 01-11-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D3790_15420 63a229b416af0d7caa0b11ef90430221 146 PRINTS PR00369 Flavodoxin signature 5 18 2.1E-8 T 01-11-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D3790_15420 63a229b416af0d7caa0b11ef90430221 146 PRINTS PR00369 Flavodoxin signature 106 125 2.1E-8 T 01-11-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D3790_15420 63a229b416af0d7caa0b11ef90430221 146 SUPERFAMILY SSF52218 1 146 2.19E-39 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_15420 63a229b416af0d7caa0b11ef90430221 146 Pfam PF00258 Flavodoxin 7 130 9.7E-28 T 01-11-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 D3790_15420 63a229b416af0d7caa0b11ef90430221 146 Gene3D G3DSA:3.40.50.360 1 146 5.2E-48 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_17470 b38ac2c6ab47f94f7d3b95d14573ad0a 199 SUPERFAMILY SSF141571 11 197 2.16E-39 T 01-11-2018 D3790_17470 b38ac2c6ab47f94f7d3b95d14573ad0a 199 Pfam PF13599 Pentapeptide repeats (9 copies) 30 100 1.0E-10 T 01-11-2018 IPR001646 Pentapeptide repeat D3790_17470 b38ac2c6ab47f94f7d3b95d14573ad0a 199 Pfam PF13599 Pentapeptide repeats (9 copies) 101 164 4.6E-11 T 01-11-2018 IPR001646 Pentapeptide repeat D3790_17470 b38ac2c6ab47f94f7d3b95d14573ad0a 199 Gene3D G3DSA:2.160.20.80 4 199 2.0E-54 T 01-11-2018 D3790_15500 3f57b4e68f27829d0d9ac4fafafe2ed7 971 Gene3D G3DSA:3.40.50.300 245 440 2.6E-64 T 01-11-2018 D3790_15500 3f57b4e68f27829d0d9ac4fafafe2ed7 971 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 7 705 6.8E-148 T 01-11-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 D3790_15500 3f57b4e68f27829d0d9ac4fafafe2ed7 971 SUPERFAMILY SSF52540 245 423 9.87E-31 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_15500 3f57b4e68f27829d0d9ac4fafafe2ed7 971 Gene3D G3DSA:3.90.1570.50 4 237 8.7E-83 T 01-11-2018 D3790_15500 3f57b4e68f27829d0d9ac4fafafe2ed7 971 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 709 964 9.2E-56 T 01-11-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal D3790_15500 3f57b4e68f27829d0d9ac4fafafe2ed7 971 Gene3D G3DSA:3.90.640.50 29 100 8.7E-83 T 01-11-2018 D3790_15500 3f57b4e68f27829d0d9ac4fafafe2ed7 971 Pfam PF04851 Type III restriction enzyme, res subunit 244 414 1.4E-33 T 01-11-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 D3790_15500 3f57b4e68f27829d0d9ac4fafafe2ed7 971 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 4 193 8.4E-35 T 01-11-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 D3790_15500 3f57b4e68f27829d0d9ac4fafafe2ed7 971 Gene3D G3DSA:3.40.50.300 441 711 1.2E-92 T 01-11-2018 D3790_15500 3f57b4e68f27829d0d9ac4fafafe2ed7 971 SMART SM00487 242 435 3.2E-16 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_15500 3f57b4e68f27829d0d9ac4fafafe2ed7 971 Gene3D G3DSA:1.20.58.2040 712 820 2.0E-11 T 01-11-2018 D3790_15500 3f57b4e68f27829d0d9ac4fafafe2ed7 971 SUPERFAMILY SSF52540 271 678 7.97E-6 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05625 954616e9d3f960cdf7a44ec8c6e605a3 75 Pfam PF06667 Phage shock protein B 4 74 2.2E-33 T 01-11-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 D3790_05625 954616e9d3f960cdf7a44ec8c6e605a3 75 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 2 74 7.3E-30 T 01-11-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 D3790_07435 b8a6fc2937f77cf38f5e00ac04a08f8b 205 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 205 6.3E-67 T 01-11-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 D3790_07435 b8a6fc2937f77cf38f5e00ac04a08f8b 205 Gene3D G3DSA:2.40.50.140 1 66 1.0E-26 T 01-11-2018 D3790_07435 b8a6fc2937f77cf38f5e00ac04a08f8b 205 Gene3D G3DSA:1.10.150.20 67 142 5.7E-30 T 01-11-2018 D3790_07435 b8a6fc2937f77cf38f5e00ac04a08f8b 205 Pfam PF14520 Helix-hairpin-helix domain 72 130 6.6E-17 T 01-11-2018 D3790_07435 b8a6fc2937f77cf38f5e00ac04a08f8b 205 SUPERFAMILY SSF50249 2 63 5.48E-18 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_07435 b8a6fc2937f77cf38f5e00ac04a08f8b 205 SUPERFAMILY SSF47781 66 136 2.36E-22 T 01-11-2018 IPR010994 RuvA domain 2-like D3790_07435 b8a6fc2937f77cf38f5e00ac04a08f8b 205 Pfam PF07499 RuvA, C-terminal domain 162 203 8.1E-15 T 01-11-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 D3790_07435 b8a6fc2937f77cf38f5e00ac04a08f8b 205 SUPERFAMILY SSF46929 160 203 3.53E-10 T 01-11-2018 IPR036267 RuvA, C-terminal domain superfamily D3790_07435 b8a6fc2937f77cf38f5e00ac04a08f8b 205 Pfam PF01330 RuvA N terminal domain 2 62 5.3E-19 T 01-11-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 D3790_07435 b8a6fc2937f77cf38f5e00ac04a08f8b 205 Gene3D G3DSA:1.10.8.10 158 205 8.1E-23 T 01-11-2018 D3790_07435 b8a6fc2937f77cf38f5e00ac04a08f8b 205 SMART SM00278 108 127 0.069 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D3790_07435 b8a6fc2937f77cf38f5e00ac04a08f8b 205 SMART SM00278 73 92 0.054 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D3790_07435 b8a6fc2937f77cf38f5e00ac04a08f8b 205 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 205 32.401 T 01-11-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 D3790_12815 b12910da8ee79e71e7e11142158c4721 60 SMART SM00923 7 53 1.8E-6 T 01-11-2018 IPR005153 MbtH-like domain D3790_12815 b12910da8ee79e71e7e11142158c4721 60 Pfam PF03621 MbtH-like protein 7 52 7.6E-16 T 01-11-2018 IPR005153 MbtH-like domain D3790_12815 b12910da8ee79e71e7e11142158c4721 60 SUPERFAMILY SSF160582 4 57 5.89E-17 T 01-11-2018 IPR038020 MbtH-like domain superfamily D3790_12815 b12910da8ee79e71e7e11142158c4721 60 Gene3D G3DSA:3.90.820.10 1 60 6.7E-18 T 01-11-2018 D3790_15005 f515ee72df8209502f4acd6754b97804 254 Gene3D G3DSA:3.20.20.70 1 241 1.5E-78 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_15005 f515ee72df8209502f4acd6754b97804 254 SUPERFAMILY SSF51366 1 232 1.57E-58 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D3790_15005 f515ee72df8209502f4acd6754b97804 254 Pfam PF00977 Histidine biosynthesis protein 5 232 9.2E-62 T 01-11-2018 IPR006062 Histidine biosynthesis GO:0000105 D3790_10110 0a8b013e56fca5f8d936887a3b4be005 258 SUPERFAMILY SSF51366 1 256 4.63E-72 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D3790_10110 0a8b013e56fca5f8d936887a3b4be005 258 Gene3D G3DSA:3.20.20.70 1 258 1.3E-89 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_10110 0a8b013e56fca5f8d936887a3b4be005 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.1E-112 T 01-11-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 D3790_10110 0a8b013e56fca5f8d936887a3b4be005 258 Pfam PF00977 Histidine biosynthesis protein 5 239 6.1E-75 T 01-11-2018 IPR006062 Histidine biosynthesis GO:0000105 D3790_10110 0a8b013e56fca5f8d936887a3b4be005 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 43.878 T 01-11-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 D3790_00905 d392edc7bda218b60158f05682eb1499 538 Pfam PF14104 Domain of unknown function (DUF4277) 8 113 5.8E-42 T 01-11-2018 IPR025457 Domain of unknown function DUF4277 D3790_00905 d392edc7bda218b60158f05682eb1499 538 Pfam PF01609 Transposase DDE domain 156 461 8.0E-13 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_00905 d392edc7bda218b60158f05682eb1499 538 SUPERFAMILY SSF53098 383 484 1.9E-6 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_04825 d93ee052dc51a44919d7a233c1bf82aa 404 SUPERFAMILY SSF53383 7 402 9.52E-95 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_04825 d93ee052dc51a44919d7a233c1bf82aa 404 Gene3D G3DSA:3.90.1150.10 22 398 2.2E-147 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_04825 d93ee052dc51a44919d7a233c1bf82aa 404 Gene3D G3DSA:3.40.640.10 53 294 2.2E-147 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_04825 d93ee052dc51a44919d7a233c1bf82aa 404 Pfam PF00155 Aminotransferase class I and II 35 389 8.8E-48 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D3790_06345 78884c999e05a58203ea1f86ff5e7590 486 Gene3D G3DSA:3.30.870.10 110 302 1.7E-38 T 01-11-2018 D3790_06345 78884c999e05a58203ea1f86ff5e7590 486 Gene3D G3DSA:3.30.870.10 303 483 4.9E-33 T 01-11-2018 D3790_06345 78884c999e05a58203ea1f86ff5e7590 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 50.504 T 01-11-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 D3790_06345 78884c999e05a58203ea1f86ff5e7590 486 Pfam PF13091 PLD-like domain 327 447 7.3E-26 T 01-11-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 D3790_06345 78884c999e05a58203ea1f86ff5e7590 486 Pfam PF13091 PLD-like domain 134 247 6.7E-13 T 01-11-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 D3790_06345 78884c999e05a58203ea1f86ff5e7590 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 7 486 6.2E-191 T 01-11-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 D3790_06345 78884c999e05a58203ea1f86ff5e7590 486 SMART SM00155 219 246 2.0E-4 T 01-11-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 D3790_06345 78884c999e05a58203ea1f86ff5e7590 486 SMART SM00155 399 426 7.4E-5 T 01-11-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 D3790_06345 78884c999e05a58203ea1f86ff5e7590 486 SUPERFAMILY SSF56024 65 315 4.93E-49 T 01-11-2018 D3790_06345 78884c999e05a58203ea1f86ff5e7590 486 SUPERFAMILY SSF56024 273 473 4.26E-47 T 01-11-2018 D3790_06345 78884c999e05a58203ea1f86ff5e7590 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 24 59 5.5E-5 T 01-11-2018 IPR027379 Cardiolipin synthase N-terminal D3790_05155 e7052b580e9d7b59e595cf9d6710833a 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 248 3.6E-61 T 01-11-2018 IPR014030 Beta-ketoacyl synthase, N-terminal D3790_05155 e7052b580e9d7b59e595cf9d6710833a 413 SMART SM00825 Beta-ketoacyl synthase 6 413 2.7E-17 T 01-11-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain D3790_05155 e7052b580e9d7b59e595cf9d6710833a 413 Gene3D G3DSA:3.40.47.10 258 402 1.4E-53 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_05155 e7052b580e9d7b59e595cf9d6710833a 413 PIRSF PIRSF000447 1 413 2.6E-194 T 01-11-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 D3790_05155 e7052b580e9d7b59e595cf9d6710833a 413 Gene3D G3DSA:3.40.47.10 1 256 2.8E-89 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_05155 e7052b580e9d7b59e595cf9d6710833a 413 SUPERFAMILY SSF53901 3 253 2.76E-78 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_05155 e7052b580e9d7b59e595cf9d6710833a 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 256 369 6.7E-40 T 01-11-2018 IPR014031 Beta-ketoacyl synthase, C-terminal D3790_05155 e7052b580e9d7b59e595cf9d6710833a 413 SUPERFAMILY SSF53901 215 412 4.19E-74 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_05155 e7052b580e9d7b59e595cf9d6710833a 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 1.0E-191 T 01-11-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 D3790_05155 e7052b580e9d7b59e595cf9d6710833a 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 01-11-2018 IPR018201 Beta-ketoacyl synthase, active site D3790_09610 c612c3cc691b8307449898d076405291 217 Gene3D G3DSA:2.40.160.50 25 216 1.5E-33 T 01-11-2018 D3790_09610 c612c3cc691b8307449898d076405291 217 Pfam PF17287 POTRA domain 4 47 1.5E-18 T 01-11-2018 IPR035251 ShlB, POTRA domain D3790_09610 c612c3cc691b8307449898d076405291 217 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 52 214 9.7E-40 T 01-11-2018 IPR005565 Haemolysin activator HlyB, C-terminal D3790_18510 0b8479213f1a8003f5ea0939839e42d8 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 3.1E-41 T 01-11-2018 IPR023370 YaeB-like, N-terminal domain D3790_18510 0b8479213f1a8003f5ea0939839e42d8 235 Gene3D G3DSA:2.40.30.70 24 147 1.5E-49 T 01-11-2018 IPR036414 YaeB, N-terminal domain superfamily D3790_18510 0b8479213f1a8003f5ea0939839e42d8 235 SUPERFAMILY SSF118196 1 230 1.96E-86 T 01-11-2018 IPR036413 YaeB-like superfamily D3790_18510 0b8479213f1a8003f5ea0939839e42d8 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 01-11-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site D3790_18510 0b8479213f1a8003f5ea0939839e42d8 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 1 149 5.3E-58 T 01-11-2018 IPR023370 YaeB-like, N-terminal domain D3790_18510 0b8479213f1a8003f5ea0939839e42d8 235 Gene3D G3DSA:3.30.2310.10 148 231 8.0E-21 T 01-11-2018 D3790_11565 2a4fe9e20d8fb80ce8454d4a9066477b 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_11565 2a4fe9e20d8fb80ce8454d4a9066477b 228 Pfam PF00005 ABC transporter 26 174 2.7E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_11565 2a4fe9e20d8fb80ce8454d4a9066477b 228 Gene3D G3DSA:3.40.50.300 3 228 4.2E-64 T 01-11-2018 D3790_11565 2a4fe9e20d8fb80ce8454d4a9066477b 228 SUPERFAMILY SSF52540 6 226 9.29E-65 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_11565 2a4fe9e20d8fb80ce8454d4a9066477b 228 SMART SM00382 35 225 2.9E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_08965 8dda518c13c89b0c0e78f08bf3bf50d5 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 01-11-2018 IPR019844 Cold-shock conserved site D3790_08965 8dda518c13c89b0c0e78f08bf3bf50d5 70 SUPERFAMILY SSF50249 4 69 1.32E-25 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_08965 8dda518c13c89b0c0e78f08bf3bf50d5 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 2.1E-33 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_08965 8dda518c13c89b0c0e78f08bf3bf50d5 70 Gene3D G3DSA:2.40.50.140 2 70 1.3E-31 T 01-11-2018 D3790_08965 8dda518c13c89b0c0e78f08bf3bf50d5 70 PRINTS PR00050 Cold shock protein signature 43 61 1.2E-17 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_08965 8dda518c13c89b0c0e78f08bf3bf50d5 70 PRINTS PR00050 Cold shock protein signature 7 22 1.2E-17 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_08965 8dda518c13c89b0c0e78f08bf3bf50d5 70 PRINTS PR00050 Cold shock protein signature 28 37 1.2E-17 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_08965 8dda518c13c89b0c0e78f08bf3bf50d5 70 PIRSF PIRSF002599 1 70 5.3E-26 T 01-11-2018 IPR012156 Cold shock, CspA GO:0003676 D3790_08965 8dda518c13c89b0c0e78f08bf3bf50d5 70 SMART SM00357 6 70 7.6E-31 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 D3790_10925 a8ad8ec009f8b16198c2109cbcae7e21 305 Gene3D G3DSA:3.30.1700.10 129 305 2.0E-72 T 01-11-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 D3790_10925 a8ad8ec009f8b16198c2109cbcae7e21 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 301 4.8E-155 T 01-11-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 D3790_10925 a8ad8ec009f8b16198c2109cbcae7e21 305 SUPERFAMILY SSF54211 3 124 1.97E-41 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_10925 a8ad8ec009f8b16198c2109cbcae7e21 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 1.1E-107 T 01-11-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 D3790_10925 a8ad8ec009f8b16198c2109cbcae7e21 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 45.688 T 01-11-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 D3790_10925 a8ad8ec009f8b16198c2109cbcae7e21 305 Gene3D G3DSA:3.30.230.20 1 128 1.3E-51 T 01-11-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 D3790_10925 a8ad8ec009f8b16198c2109cbcae7e21 305 SUPERFAMILY SSF54211 135 277 3.72E-53 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_18975 21a972c8953da726442385c5714bc453 168 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 165 18.986 T 01-11-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 D3790_18975 21a972c8953da726442385c5714bc453 168 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 7.0E-32 T 01-11-2018 D3790_18975 21a972c8953da726442385c5714bc453 168 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 7.0E-32 T 01-11-2018 D3790_18975 21a972c8953da726442385c5714bc453 168 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 7.0E-32 T 01-11-2018 D3790_18975 21a972c8953da726442385c5714bc453 168 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 81 9.4E-30 T 01-11-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 D3790_05465 b16134674d5c71d86cb650bfb507e726 155 Gene3D G3DSA:3.40.30.10 4 155 3.5E-48 T 01-11-2018 D3790_05465 b16134674d5c71d86cb650bfb507e726 155 SUPERFAMILY SSF52833 3 154 1.74E-48 T 01-11-2018 IPR036249 Thioredoxin-like superfamily D3790_05465 b16134674d5c71d86cb650bfb507e726 155 Pfam PF00578 AhpC/TSA family 7 134 1.2E-37 T 01-11-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D3790_05465 b16134674d5c71d86cb650bfb507e726 155 PIRSF PIRSF000239 1 142 1.1E-17 T 01-11-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D3790_14840 62d35d954d3fedb698040cbbeb6756dd 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 1.7E-183 T 01-11-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 D3790_14840 62d35d954d3fedb698040cbbeb6756dd 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 4.1E-27 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 D3790_14840 62d35d954d3fedb698040cbbeb6756dd 341 SUPERFAMILY SSF51735 141 305 6.94E-38 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_14840 62d35d954d3fedb698040cbbeb6756dd 341 SUPERFAMILY SSF50129 1 173 5.78E-55 T 01-11-2018 IPR011032 GroES-like superfamily D3790_14840 62d35d954d3fedb698040cbbeb6756dd 341 Gene3D G3DSA:3.40.50.720 153 286 1.3E-119 T 01-11-2018 D3790_14840 62d35d954d3fedb698040cbbeb6756dd 341 Gene3D G3DSA:3.90.180.10 21 328 1.3E-119 T 01-11-2018 D3790_14840 62d35d954d3fedb698040cbbeb6756dd 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 01-11-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 D3790_14840 62d35d954d3fedb698040cbbeb6756dd 341 SMART SM00829 12 338 7.0E-6 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 D3790_14840 62d35d954d3fedb698040cbbeb6756dd 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.843 T 01-11-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 D3790_14840 62d35d954d3fedb698040cbbeb6756dd 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 1.2E-32 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 D3790_08170 04ed7adb3d3eb83a85e747d54950989e 213 SUPERFAMILY SSF63380 1 93 4.0E-26 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel D3790_08170 04ed7adb3d3eb83a85e747d54950989e 213 Pfam PF00677 Lumazine binding domain 100 185 7.9E-22 T 01-11-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D3790_08170 04ed7adb3d3eb83a85e747d54950989e 213 Pfam PF00677 Lumazine binding domain 3 87 1.4E-19 T 01-11-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D3790_08170 04ed7adb3d3eb83a85e747d54950989e 213 SUPERFAMILY SSF63380 93 200 1.7E-31 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel D3790_08170 04ed7adb3d3eb83a85e747d54950989e 213 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 204 6.4E-80 T 01-11-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D3790_08170 04ed7adb3d3eb83a85e747d54950989e 213 PIRSF PIRSF000498 1 212 7.8E-73 T 01-11-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D3790_08170 04ed7adb3d3eb83a85e747d54950989e 213 Gene3D G3DSA:2.40.30.20 1 89 1.8E-30 T 01-11-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D3790_08170 04ed7adb3d3eb83a85e747d54950989e 213 Gene3D G3DSA:2.40.30.20 94 192 5.7E-28 T 01-11-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D3790_16535 e1c7ac87c996b29b27f7d6d0c7d23281 701 Gene3D G3DSA:1.20.1560.10 157 471 4.5E-49 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_16535 e1c7ac87c996b29b27f7d6d0c7d23281 701 Gene3D G3DSA:3.40.50.300 479 701 5.2E-67 T 01-11-2018 D3790_16535 e1c7ac87c996b29b27f7d6d0c7d23281 701 Pfam PF00664 ABC transporter transmembrane region 172 439 3.5E-31 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D3790_16535 e1c7ac87c996b29b27f7d6d0c7d23281 701 SMART SM00382 514 698 1.3E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_16535 e1c7ac87c996b29b27f7d6d0c7d23281 701 Pfam PF00005 ABC transporter 507 654 1.3E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_16535 e1c7ac87c996b29b27f7d6d0c7d23281 701 Pfam PF03412 Peptidase C39 family 16 144 2.7E-37 T 01-11-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 D3790_16535 e1c7ac87c996b29b27f7d6d0c7d23281 701 SUPERFAMILY SSF52540 477 696 4.88E-63 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16535 e1c7ac87c996b29b27f7d6d0c7d23281 701 ProSitePatterns PS00211 ABC transporters family signature. 626 640 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_16535 e1c7ac87c996b29b27f7d6d0c7d23281 701 SUPERFAMILY SSF90123 166 638 3.14E-47 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_16535 e1c7ac87c996b29b27f7d6d0c7d23281 701 Gene3D G3DSA:3.90.70.10 6 152 1.0E-42 T 01-11-2018 D3790_03675 851b819bbf319f26804009ad03f1da59 935 Gene3D G3DSA:3.40.50.11610 723 929 6.0E-173 T 01-11-2018 D3790_03675 851b819bbf319f26804009ad03f1da59 935 PIRSF PIRSF000157 1 934 0.0 T 01-11-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 D3790_03675 851b819bbf319f26804009ad03f1da59 935 Pfam PF00676 Dehydrogenase E1 component 220 512 3.1E-48 T 01-11-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 D3790_03675 851b819bbf319f26804009ad03f1da59 935 Gene3D G3DSA:3.40.50.12470 556 802 6.0E-173 T 01-11-2018 D3790_03675 851b819bbf319f26804009ad03f1da59 935 Pfam PF02779 Transketolase, pyrimidine binding domain 593 787 8.4E-64 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D3790_03675 851b819bbf319f26804009ad03f1da59 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 2.2E-17 T 01-11-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 D3790_03675 851b819bbf319f26804009ad03f1da59 935 SUPERFAMILY SSF52518 577 793 2.28E-50 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_03675 851b819bbf319f26804009ad03f1da59 935 SMART SM00861 593 786 7.8E-60 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D3790_03675 851b819bbf319f26804009ad03f1da59 935 Gene3D G3DSA:3.40.50.970 167 533 5.7E-146 T 01-11-2018 D3790_03675 851b819bbf319f26804009ad03f1da59 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 01-11-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 D3790_03675 851b819bbf319f26804009ad03f1da59 935 SUPERFAMILY SSF52518 121 549 1.77E-86 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_03675 851b819bbf319f26804009ad03f1da59 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 790 932 5.3E-55 T 01-11-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 D3790_03675 851b819bbf319f26804009ad03f1da59 935 Gene3D G3DSA:1.10.287.1150 84 166 1.6E-29 T 01-11-2018 D3790_07390 cc92b4494e68db449a9fc6982af44fbe 409 Gene3D G3DSA:3.90.380.10 57 252 1.4E-39 T 01-11-2018 D3790_07390 cc92b4494e68db449a9fc6982af44fbe 409 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 226 397 9.4E-23 T 01-11-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 D3790_07390 cc92b4494e68db449a9fc6982af44fbe 409 Pfam PF00355 Rieske [2Fe-2S] domain 80 162 2.8E-13 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 D3790_07390 cc92b4494e68db449a9fc6982af44fbe 409 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 113 133 1.3E-11 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 D3790_07390 cc92b4494e68db449a9fc6982af44fbe 409 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 92 107 1.3E-11 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 D3790_07390 cc92b4494e68db449a9fc6982af44fbe 409 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 134 154 1.3E-11 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 D3790_07390 cc92b4494e68db449a9fc6982af44fbe 409 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 214 236 1.3E-11 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 D3790_07390 cc92b4494e68db449a9fc6982af44fbe 409 SUPERFAMILY SSF50022 48 178 6.42E-29 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 D3790_07390 cc92b4494e68db449a9fc6982af44fbe 409 SUPERFAMILY SSF55961 195 395 1.65E-30 T 01-11-2018 D3790_07390 cc92b4494e68db449a9fc6982af44fbe 409 Gene3D G3DSA:2.102.10.10 74 197 1.4E-39 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 D3790_01705 a611c396c141ec1d7c58d0f20455db54 193 Pfam PF11198 Protein of unknown function (DUF2857) 9 181 1.2E-64 T 01-11-2018 IPR021364 Protein of unknown function DUF2857 D3790_11555 769044fee7c59e90ff35b946b18963ad 258 Gene3D G3DSA:3.40.50.720 2 254 1.2E-63 T 01-11-2018 D3790_11555 769044fee7c59e90ff35b946b18963ad 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D3790_11555 769044fee7c59e90ff35b946b18963ad 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.3E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_11555 769044fee7c59e90ff35b946b18963ad 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.3E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_11555 769044fee7c59e90ff35b946b18963ad 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.3E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_11555 769044fee7c59e90ff35b946b18963ad 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.3E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_11555 769044fee7c59e90ff35b946b18963ad 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.3E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_11555 769044fee7c59e90ff35b946b18963ad 258 SUPERFAMILY SSF51735 3 256 3.78E-58 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_11555 769044fee7c59e90ff35b946b18963ad 258 Pfam PF00106 short chain dehydrogenase 3 191 1.2E-42 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_11555 769044fee7c59e90ff35b946b18963ad 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 3.8E-5 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_11555 769044fee7c59e90ff35b946b18963ad 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 3.8E-5 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_11555 769044fee7c59e90ff35b946b18963ad 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 3.8E-5 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_10055 42e385a23782ad0de1296641c2c281fc 434 Pfam PF03222 Tryptophan/tyrosine permease family 34 423 9.4E-12 T 01-11-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 D3790_10055 42e385a23782ad0de1296641c2c281fc 434 TIGRFAM TIGR00814 stp: serine transporter 22 424 8.8E-172 T 01-11-2018 IPR004694 Hydroxy amino acid transporter GO:0006865|GO:0015171|GO:0016021 D3790_18465 63d262d8d0ca3d59038779e6174123f8 394 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 17 393 42.611 T 01-11-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 D3790_18465 63d262d8d0ca3d59038779e6174123f8 394 SUPERFAMILY SSF53756 20 362 3.0E-26 T 01-11-2018 D3790_18465 63d262d8d0ca3d59038779e6174123f8 394 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 14 391 8.6E-168 T 01-11-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 D3790_18465 63d262d8d0ca3d59038779e6174123f8 394 Pfam PF02684 Lipid-A-disaccharide synthetase 20 388 1.1E-141 T 01-11-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 D3790_16165 9b5f613e478576d80b6d454a8cbeea03 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 457 6.3E-218 T 01-11-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 D3790_16165 9b5f613e478576d80b6d454a8cbeea03 457 PIRSF PIRSF000167 3 454 1.1E-172 T 01-11-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 D3790_16165 9b5f613e478576d80b6d454a8cbeea03 457 Gene3D G3DSA:3.80.30.20 1 363 3.1E-135 T 01-11-2018 IPR023404 Radical SAM, alpha/beta horseshoe D3790_16165 9b5f613e478576d80b6d454a8cbeea03 457 Pfam PF06969 HemN C-terminal domain 363 431 3.8E-10 T 01-11-2018 IPR010723 HemN, C-terminal D3790_16165 9b5f613e478576d80b6d454a8cbeea03 457 SUPERFAMILY SSF102114 6 444 2.22E-144 T 01-11-2018 D3790_16165 9b5f613e478576d80b6d454a8cbeea03 457 SMART SM00729 52 272 4.0E-52 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D3790_16165 9b5f613e478576d80b6d454a8cbeea03 457 Gene3D G3DSA:1.10.10.920 364 457 5.2E-37 T 01-11-2018 D3790_16165 9b5f613e478576d80b6d454a8cbeea03 457 Pfam PF04055 Radical SAM superfamily 57 226 2.0E-18 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D3790_00485 d6161acb245e2fa4e9495e70a8e22a9b 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.6E-18 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_00485 d6161acb245e2fa4e9495e70a8e22a9b 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.6E-18 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_00485 d6161acb245e2fa4e9495e70a8e22a9b 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.6E-18 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_00485 d6161acb245e2fa4e9495e70a8e22a9b 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.6E-18 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_00485 d6161acb245e2fa4e9495e70a8e22a9b 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.6E-18 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_00485 d6161acb245e2fa4e9495e70a8e22a9b 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 256 6.1E-32 T 01-11-2018 D3790_00485 d6161acb245e2fa4e9495e70a8e22a9b 262 SUPERFAMILY SSF51735 7 257 1.7E-50 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_00485 d6161acb245e2fa4e9495e70a8e22a9b 262 Gene3D G3DSA:3.40.50.720 1 262 2.7E-51 T 01-11-2018 D3790_10060 b28a5125ae0c324df4e14f81880db0ad 402 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 287 378 1.7E-23 T 01-11-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D3790_10060 b28a5125ae0c324df4e14f81880db0ad 402 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 36 267 7.8E-95 T 01-11-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 D3790_10060 b28a5125ae0c324df4e14f81880db0ad 402 Gene3D G3DSA:3.40.710.10 27 286 5.1E-89 T 01-11-2018 D3790_10060 b28a5125ae0c324df4e14f81880db0ad 402 SUPERFAMILY SSF69189 287 380 4.71E-22 T 01-11-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D3790_10060 b28a5125ae0c324df4e14f81880db0ad 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 67 78 8.4E-18 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 D3790_10060 b28a5125ae0c324df4e14f81880db0ad 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 126 143 8.4E-18 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 D3790_10060 b28a5125ae0c324df4e14f81880db0ad 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 153 166 8.4E-18 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 D3790_10060 b28a5125ae0c324df4e14f81880db0ad 402 Gene3D G3DSA:2.60.410.10 287 378 1.4E-24 T 01-11-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D3790_10060 b28a5125ae0c324df4e14f81880db0ad 402 SUPERFAMILY SSF56601 12 287 2.51E-79 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like D3790_10060 b28a5125ae0c324df4e14f81880db0ad 402 SMART SM00936 287 378 3.2E-28 T 01-11-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D3790_12420 0ee5234f7e96e81346f6f4f58566a621 293 Gene3D G3DSA:1.10.150.130 9 100 1.1E-5 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal D3790_12420 0ee5234f7e96e81346f6f4f58566a621 293 SUPERFAMILY SSF56349 43 254 3.14E-13 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_12420 0ee5234f7e96e81346f6f4f58566a621 293 Pfam PF12834 Phage integrase, N-terminal 1 90 3.1E-31 T 01-11-2018 IPR024457 Putative integrase, N-terminal D3790_12420 0ee5234f7e96e81346f6f4f58566a621 293 Pfam PF12835 Integrase 102 250 2.1E-57 T 01-11-2018 IPR024456 Integrase catalytic domain, putative D3790_07380 b1a114801f4fce0cd77207391abd34e8 255 Pfam PF00975 Thioesterase domain 27 248 1.3E-48 T 01-11-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 D3790_07380 b1a114801f4fce0cd77207391abd34e8 255 SUPERFAMILY SSF53474 12 251 5.3E-55 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_07380 b1a114801f4fce0cd77207391abd34e8 255 Gene3D G3DSA:3.40.50.1820 25 253 3.5E-60 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_07380 b1a114801f4fce0cd77207391abd34e8 255 SMART SM00824 Thioesterase 29 251 0.0021 T 01-11-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 D3790_06395 9ca50d783afa7b909017d5c0b9b9dd97 268 Gene3D G3DSA:3.20.20.70 1 268 1.8E-95 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_06395 9ca50d783afa7b909017d5c0b9b9dd97 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.168 T 01-11-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D3790_06395 9ca50d783afa7b909017d5c0b9b9dd97 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 2.4E-94 T 01-11-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D3790_06395 9ca50d783afa7b909017d5c0b9b9dd97 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 9.0E-102 T 01-11-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D3790_06395 9ca50d783afa7b909017d5c0b9b9dd97 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 01-11-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D3790_06395 9ca50d783afa7b909017d5c0b9b9dd97 268 SUPERFAMILY SSF51366 1 266 1.22E-89 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D3790_05050 f25d6a9a58bd00c5b1ec2cd1d143abab 578 Gene3D G3DSA:3.30.70.610 269 344 3.3E-19 T 01-11-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 D3790_05050 f25d6a9a58bd00c5b1ec2cd1d143abab 578 Gene3D G3DSA:3.30.70.610 371 434 7.7E-19 T 01-11-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 D3790_05050 f25d6a9a58bd00c5b1ec2cd1d143abab 578 PIRSF PIRSF000101 4 569 2.3E-289 T 01-11-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 D3790_05050 f25d6a9a58bd00c5b1ec2cd1d143abab 578 Gene3D G3DSA:3.30.1370.20 435 519 1.3E-40 T 01-11-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 D3790_05050 f25d6a9a58bd00c5b1ec2cd1d143abab 578 SUPERFAMILY SSF55103 276 567 7.63E-114 T 01-11-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 D3790_05050 f25d6a9a58bd00c5b1ec2cd1d143abab 578 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 10 568 58.106 T 01-11-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 D3790_05050 f25d6a9a58bd00c5b1ec2cd1d143abab 578 Gene3D G3DSA:3.30.43.10 3 103 5.2E-12 T 01-11-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 D3790_05050 f25d6a9a58bd00c5b1ec2cd1d143abab 578 SUPERFAMILY SSF56176 10 271 1.73E-68 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 D3790_05050 f25d6a9a58bd00c5b1ec2cd1d143abab 578 Pfam PF09330 D-lactate dehydrogenase, membrane binding 278 567 9.5E-146 T 01-11-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 D3790_05050 f25d6a9a58bd00c5b1ec2cd1d143abab 578 Gene3D G3DSA:3.30.465.10 106 268 1.6E-71 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 D3790_05050 f25d6a9a58bd00c5b1ec2cd1d143abab 578 Pfam PF01565 FAD binding domain 47 167 2.1E-7 T 01-11-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 D3790_08875 4d61423c8f545b9d6ab390b9b5b6bc5a 293 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 1.6E-117 T 01-11-2018 IPR022522 Flagellar motor stator, MotA D3790_08875 4d61423c8f545b9d6ab390b9b5b6bc5a 293 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 01-11-2018 IPR000540 Flagellar motor protein MotA, conserved site D3790_08875 4d61423c8f545b9d6ab390b9b5b6bc5a 293 Pfam PF01618 MotA/TolQ/ExbB proton channel family 134 239 2.1E-12 T 01-11-2018 IPR002898 MotA/TolQ/ExbB proton channel D3790_03145 ad67ffbb4691c512eaffdb0bc66b92ee 802 SUPERFAMILY SSF55729 17 182 8.05E-42 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_03145 ad67ffbb4691c512eaffdb0bc66b92ee 802 Gene3D G3DSA:1.10.274.90 195 333 1.9E-45 T 01-11-2018 D3790_03145 ad67ffbb4691c512eaffdb0bc66b92ee 802 Gene3D G3DSA:3.40.630.30 10 185 5.0E-46 T 01-11-2018 D3790_03145 ad67ffbb4691c512eaffdb0bc66b92ee 802 Pfam PF06276 Ferric iron reductase FhuF-like transporter 615 772 1.7E-36 T 01-11-2018 IPR022770 Ferric iron reductase FhuF domain D3790_03145 ad67ffbb4691c512eaffdb0bc66b92ee 802 Gene3D G3DSA:1.10.510.40 582 789 1.8E-70 T 01-11-2018 D3790_03145 ad67ffbb4691c512eaffdb0bc66b92ee 802 SMART SM01006 22 70 1.2E-10 T 01-11-2018 IPR019432 Siderophore biosynthesis protein, conserved domain D3790_03145 ad67ffbb4691c512eaffdb0bc66b92ee 802 Pfam PF13523 Acetyltransferase (GNAT) domain 25 169 4.1E-43 T 01-11-2018 D3790_03145 ad67ffbb4691c512eaffdb0bc66b92ee 802 Pfam PF04183 IucA / IucC family 343 593 1.8E-76 T 01-11-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 D3790_15345 9ebf767165b7a75448c5777db838b829 551 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 64 470 6.4E-63 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 D3790_15345 9ebf767165b7a75448c5777db838b829 551 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 11 551 0.0 T 01-11-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 D3790_15345 9ebf767165b7a75448c5777db838b829 551 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 179 204 - T 01-11-2018 IPR018212 Sodium/solute symporter, conserved site D3790_15345 9ebf767165b7a75448c5777db838b829 551 Gene3D G3DSA:1.20.1730.10 34 547 2.7E-61 T 01-11-2018 IPR038377 Sodium/glucose symporter superfamily D3790_15345 9ebf767165b7a75448c5777db838b829 551 Pfam PF00474 Sodium:solute symporter family 64 470 6.0E-127 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 D3790_13545 a613ec3e10f1e648bfa22e4f72c380b7 150 Gene3D G3DSA:3.40.5.10 1 50 5.1E-25 T 01-11-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13545 a613ec3e10f1e648bfa22e4f72c380b7 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 5.5E-22 T 01-11-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13545 a613ec3e10f1e648bfa22e4f72c380b7 150 SUPERFAMILY SSF55658 1 57 4.01E-19 T 01-11-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal D3790_13545 a613ec3e10f1e648bfa22e4f72c380b7 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.6E-57 T 01-11-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_13545 a613ec3e10f1e648bfa22e4f72c380b7 150 SUPERFAMILY SSF55653 61 149 2.09E-25 T 01-11-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily D3790_13545 a613ec3e10f1e648bfa22e4f72c380b7 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 2.8E-25 T 01-11-2018 IPR020069 Ribosomal protein L9, C-terminal D3790_13545 a613ec3e10f1e648bfa22e4f72c380b7 150 Gene3D G3DSA:3.10.430.100 61 149 4.1E-31 T 01-11-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily D3790_13545 a613ec3e10f1e648bfa22e4f72c380b7 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 01-11-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13545 a613ec3e10f1e648bfa22e4f72c380b7 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.56 T 01-11-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_07290 042480795cb72890830fb7273f03186f 635 SUPERFAMILY SSF52540 39 598 4.57E-11 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_07290 042480795cb72890830fb7273f03186f 635 Pfam PF00270 DEAD/DEAH box helicase 29 129 2.6E-6 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D3790_07290 042480795cb72890830fb7273f03186f 635 Gene3D G3DSA:3.40.50.300 444 631 2.0E-36 T 01-11-2018 D3790_07290 042480795cb72890830fb7273f03186f 635 Gene3D G3DSA:3.40.50.300 18 284 1.9E-49 T 01-11-2018 D3790_07290 042480795cb72890830fb7273f03186f 635 SMART SM00491 474 603 2.3E-52 T 01-11-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 D3790_07290 042480795cb72890830fb7273f03186f 635 Pfam PF13307 Helicase C-terminal domain 459 616 3.8E-34 T 01-11-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 D3790_07290 042480795cb72890830fb7273f03186f 635 SMART SM00487 16 302 0.002 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_07290 042480795cb72890830fb7273f03186f 635 SUPERFAMILY SSF52540 13 233 1.08E-27 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_07290 042480795cb72890830fb7273f03186f 635 Pfam PF06733 DEAD_2 177 247 3.0E-5 T 01-11-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 D3790_10315 ff1a6c59c7ad2b95da6bedcb1023b261 351 SUPERFAMILY SSF88874 222 349 1.7E-35 T 01-11-2018 D3790_10315 ff1a6c59c7ad2b95da6bedcb1023b261 351 Gene3D G3DSA:3.90.1340.10 222 275 2.3E-25 T 01-11-2018 IPR037053 Phage tail collar domain superfamily D3790_10315 ff1a6c59c7ad2b95da6bedcb1023b261 351 Pfam PF07484 Phage Tail Collar Domain 227 274 2.2E-10 T 01-11-2018 IPR011083 Phage tail collar domain D3790_01745 0523b315d51c06028d587d280d53f385 88 SUPERFAMILY SSF47413 2 71 1.52E-30 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_01745 0523b315d51c06028d587d280d53f385 88 Gene3D G3DSA:1.10.260.40 2 72 1.3E-33 T 01-11-2018 D3790_01745 0523b315d51c06028d587d280d53f385 88 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 5.2E-38 T 01-11-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain D3790_08545 853fa9360191a8b61d1b2d850be1d58b 285 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 13 284 9.1E-141 T 01-11-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 D3790_08545 853fa9360191a8b61d1b2d850be1d58b 285 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 14 284 6.6E-113 T 01-11-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 D3790_08565 f4d25304d7666223dc8b6b5ba82d013f 442 Gene3D G3DSA:1.20.1250.20 238 438 1.5E-43 T 01-11-2018 D3790_08565 f4d25304d7666223dc8b6b5ba82d013f 442 SUPERFAMILY SSF103473 19 437 2.62E-80 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_08565 f4d25304d7666223dc8b6b5ba82d013f 442 Pfam PF07690 Major Facilitator Superfamily 35 396 4.4E-47 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_08565 f4d25304d7666223dc8b6b5ba82d013f 442 PIRSF PIRSF002808 6 442 3.6E-138 T 01-11-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 D3790_08565 f4d25304d7666223dc8b6b5ba82d013f 442 Gene3D G3DSA:1.20.1250.20 19 223 6.5E-49 T 01-11-2018 D3790_08565 f4d25304d7666223dc8b6b5ba82d013f 442 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 1.8E-134 T 01-11-2018 D3790_18225 5ab93a6ba08881d95dc7056178eaef68 628 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 17 623 51.031 T 01-11-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 D3790_18225 5ab93a6ba08881d95dc7056178eaef68 628 Gene3D G3DSA:3.40.50.300 123 373 4.8E-78 T 01-11-2018 D3790_18225 5ab93a6ba08881d95dc7056178eaef68 628 Pfam PF13538 UvrD-like helicase C-terminal domain 554 600 6.7E-15 T 01-11-2018 IPR027785 UvrD-like helicase C-terminal domain D3790_18225 5ab93a6ba08881d95dc7056178eaef68 628 Pfam PF13604 AAA domain 168 332 8.0E-31 T 01-11-2018 D3790_18225 5ab93a6ba08881d95dc7056178eaef68 628 SUPERFAMILY SSF52540 296 624 6.64E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_18225 5ab93a6ba08881d95dc7056178eaef68 628 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 8 622 1.1E-184 T 01-11-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 D3790_18225 5ab93a6ba08881d95dc7056178eaef68 628 SUPERFAMILY SSF52540 8 378 1.66E-48 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_18225 5ab93a6ba08881d95dc7056178eaef68 628 Gene3D G3DSA:1.10.10.1020 3 122 3.1E-28 T 01-11-2018 D3790_18225 5ab93a6ba08881d95dc7056178eaef68 628 Gene3D G3DSA:3.40.50.300 495 614 7.9E-28 T 01-11-2018 D3790_18225 5ab93a6ba08881d95dc7056178eaef68 628 Gene3D G3DSA:3.40.50.300 383 494 2.5E-29 T 01-11-2018 D3790_03355 f9810732ef3619e5795f6c07d638112e 407 Gene3D G3DSA:3.30.420.40 94 386 2.0E-88 T 01-11-2018 D3790_03355 f9810732ef3619e5795f6c07d638112e 407 Gene3D G3DSA:1.10.10.10 5 82 1.7E-21 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_03355 f9810732ef3619e5795f6c07d638112e 407 Pfam PF00480 ROK family 89 393 1.9E-83 T 01-11-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 D3790_03355 f9810732ef3619e5795f6c07d638112e 407 SUPERFAMILY SSF53067 88 395 1.78E-51 T 01-11-2018 D3790_03355 f9810732ef3619e5795f6c07d638112e 407 Pfam PF01047 MarR family 26 64 2.0E-7 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_03355 f9810732ef3619e5795f6c07d638112e 407 Gene3D G3DSA:3.30.420.40 211 379 2.0E-88 T 01-11-2018 D3790_03355 f9810732ef3619e5795f6c07d638112e 407 SUPERFAMILY SSF46785 15 80 6.02E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_02745 7601ad18e9dcd0a806ec7706cf097279 428 Gene3D G3DSA:3.40.50.2000 1 250 2.3E-30 T 01-11-2018 D3790_02745 7601ad18e9dcd0a806ec7706cf097279 428 Gene3D G3DSA:3.40.50.2000 251 408 2.2E-34 T 01-11-2018 D3790_02745 7601ad18e9dcd0a806ec7706cf097279 428 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 282 399 1.1E-5 T 01-11-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 D3790_02745 7601ad18e9dcd0a806ec7706cf097279 428 SUPERFAMILY SSF53756 1 422 2.42E-65 T 01-11-2018 D3790_18800 83a760cad8fde84286e6c6d904d02b16 188 SUPERFAMILY SSF158442 19 130 2.22E-19 T 01-11-2018 IPR023380 DsbB-like superfamily D3790_18800 83a760cad8fde84286e6c6d904d02b16 188 Gene3D G3DSA:1.20.1550.10 7 105 4.8E-9 T 01-11-2018 IPR023380 DsbB-like superfamily D3790_18800 83a760cad8fde84286e6c6d904d02b16 188 Pfam PF02600 Disulfide bond formation protein DsbB 17 99 1.6E-9 T 01-11-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 D3790_07225 5a54f1b9470cc1d31d7ecc2d44fc7318 218 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 208 2.8E-53 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 D3790_07225 5a54f1b9470cc1d31d7ecc2d44fc7318 218 SUPERFAMILY SSF56529 11 210 4.06E-67 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 D3790_07225 5a54f1b9470cc1d31d7ecc2d44fc7318 218 Gene3D G3DSA:3.90.850.10 1 218 9.0E-76 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 D3790_01800 87e638984fde0a4428564829b4e09913 115 Pfam PF05717 IS66 Orf2 like protein 9 106 5.2E-38 T 01-11-2018 IPR008878 Transposase IS66, Orf2 D3790_16755 23a42df247aca6148419301433028763 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 71 2.0E-14 T 01-11-2018 D3790_16755 23a42df247aca6148419301433028763 142 Gene3D G3DSA:3.30.1550.10 2 72 3.3E-35 T 01-11-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily D3790_16755 23a42df247aca6148419301433028763 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.0E-65 T 01-11-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_16755 23a42df247aca6148419301433028763 142 SMART SM00649 9 141 1.8E-84 T 01-11-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 D3790_16755 23a42df247aca6148419301433028763 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 7.7E-30 T 01-11-2018 IPR020784 Ribosomal protein L11, N-terminal D3790_16755 23a42df247aca6148419301433028763 142 Gene3D G3DSA:1.10.10.250 73 141 3.3E-27 T 01-11-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily D3790_16755 23a42df247aca6148419301433028763 142 SUPERFAMILY SSF54747 3 73 3.66E-30 T 01-11-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily D3790_16755 23a42df247aca6148419301433028763 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.86 T 01-11-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 D3790_16755 23a42df247aca6148419301433028763 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.6E-24 T 01-11-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 D3790_16755 23a42df247aca6148419301433028763 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 01-11-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_16755 23a42df247aca6148419301433028763 142 SUPERFAMILY SSF46906 68 141 2.62E-26 T 01-11-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily D3790_01130 76f57c9ab2e1913e378d8908077a09db 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 5 195 6.7E-67 T 01-11-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 D3790_01130 76f57c9ab2e1913e378d8908077a09db 199 Gene3D G3DSA:3.90.950.10 1 199 2.7E-83 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D3790_01130 76f57c9ab2e1913e378d8908077a09db 199 SUPERFAMILY SSF52972 3 197 9.42E-75 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D3790_01130 76f57c9ab2e1913e378d8908077a09db 199 Hamap MF_01405 dITP/XTP pyrophosphatase. 4 198 51.077 T 01-11-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 D3790_01130 76f57c9ab2e1913e378d8908077a09db 199 Pfam PF01725 Ham1 family 6 194 4.4E-58 T 01-11-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 D3790_07720 a62a4e31c9ad6a8e576cd3ea0ba79820 506 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 8 497 1.8E-115 T 01-11-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 D3790_07720 a62a4e31c9ad6a8e576cd3ea0ba79820 506 SUPERFAMILY SSF103473 331 493 9.16E-9 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_07720 a62a4e31c9ad6a8e576cd3ea0ba79820 506 Gene3D G3DSA:1.20.1250.20 2 497 3.1E-148 T 01-11-2018 D3790_07720 a62a4e31c9ad6a8e576cd3ea0ba79820 506 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 151 163 - T 01-11-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 D3790_07720 a62a4e31c9ad6a8e576cd3ea0ba79820 506 SUPERFAMILY SSF103473 9 307 2.09E-25 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_07720 a62a4e31c9ad6a8e576cd3ea0ba79820 506 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 76 100 - T 01-11-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 D3790_07720 a62a4e31c9ad6a8e576cd3ea0ba79820 506 Pfam PF00854 POT family 89 456 1.4E-67 T 01-11-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 D3790_06320 76f317f7e754522b9727a3c2e03a6447 101 Gene3D G3DSA:2.60.120.650 5 99 1.4E-11 T 01-11-2018 D3790_06320 76f317f7e754522b9727a3c2e03a6447 101 SUPERFAMILY SSF51197 17 86 6.04E-9 T 01-11-2018 D3790_15055 892bb385adfa874965713b532db6fb9b 349 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 141 254 6.9E-15 T 01-11-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 D3790_15055 892bb385adfa874965713b532db6fb9b 349 Gene3D G3DSA:3.40.50.720 11 319 1.4E-109 T 01-11-2018 D3790_15055 892bb385adfa874965713b532db6fb9b 349 SUPERFAMILY SSF51735 5 164 8.13E-40 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_15055 892bb385adfa874965713b532db6fb9b 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 127 2.1E-26 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 D3790_15055 892bb385adfa874965713b532db6fb9b 349 Gene3D G3DSA:3.30.360.10 137 340 1.4E-109 T 01-11-2018 D3790_15055 892bb385adfa874965713b532db6fb9b 349 SUPERFAMILY SSF55347 138 291 1.96E-33 T 01-11-2018 D3790_07205 c66a0d72a03f4f21a13f56db5871dca4 219 Gene3D G3DSA:1.10.150.240 18 84 3.7E-24 T 01-11-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D3790_07205 c66a0d72a03f4f21a13f56db5871dca4 219 Gene3D G3DSA:3.40.50.1000 6 197 3.7E-24 T 01-11-2018 IPR023214 HAD superfamily D3790_07205 c66a0d72a03f4f21a13f56db5871dca4 219 SUPERFAMILY SSF56784 5 212 2.47E-30 T 01-11-2018 IPR036412 HAD-like superfamily D3790_07205 c66a0d72a03f4f21a13f56db5871dca4 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 184 1.2E-15 T 01-11-2018 D3790_01230 82ec8e53775d7a33b38d5b4e7261da10 97 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 6 65 1.7E-12 T 01-11-2018 IPR009610 CbtA toxin of type IV toxin-antitoxin system D3790_13085 5683d1a684eb2011abfdbc3a59c521f0 380 Pfam PF01385 Probable transposase 175 278 1.1E-23 T 01-11-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 D3790_13085 5683d1a684eb2011abfdbc3a59c521f0 380 Pfam PF07282 Putative transposase DNA-binding domain 291 361 4.2E-23 T 01-11-2018 IPR010095 Transposase IS605, OrfB, C-terminal D3790_13085 5683d1a684eb2011abfdbc3a59c521f0 380 Pfam PF12323 Helix-turn-helix domain 1 45 3.2E-16 T 01-11-2018 IPR021027 Transposase, putative, helix-turn-helix domain D3790_13085 5683d1a684eb2011abfdbc3a59c521f0 380 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 246 318 3.4E-11 T 01-11-2018 IPR010095 Transposase IS605, OrfB, C-terminal D3790_17400 ea5dd431b8064e769153d4b636eb1608 987 Gene3D G3DSA:3.90.1570.50 2 228 9.8E-64 T 01-11-2018 D3790_17400 ea5dd431b8064e769153d4b636eb1608 987 Gene3D G3DSA:3.40.50.300 237 446 8.7E-63 T 01-11-2018 D3790_17400 ea5dd431b8064e769153d4b636eb1608 987 Pfam PF04851 Type III restriction enzyme, res subunit 237 415 6.0E-37 T 01-11-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 D3790_17400 ea5dd431b8064e769153d4b636eb1608 987 Gene3D G3DSA:3.40.50.300 447 705 3.1E-79 T 01-11-2018 D3790_17400 ea5dd431b8064e769153d4b636eb1608 987 SMART SM00487 234 441 5.9E-18 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_17400 ea5dd431b8064e769153d4b636eb1608 987 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 14 176 2.1E-28 T 01-11-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 D3790_17400 ea5dd431b8064e769153d4b636eb1608 987 SUPERFAMILY SSF52540 237 442 7.1E-31 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_17400 ea5dd431b8064e769153d4b636eb1608 987 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 706 973 2.5E-63 T 01-11-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal D3790_17400 ea5dd431b8064e769153d4b636eb1608 987 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 72 698 2.0E-112 T 01-11-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 D3790_17400 ea5dd431b8064e769153d4b636eb1608 987 Gene3D G3DSA:3.90.640.50 19 86 9.8E-64 T 01-11-2018 D3790_03100 a6d1ead9cb34bb1e105dc6f4667f559f 607 Pfam PF06276 Ferric iron reductase FhuF-like transporter 416 572 1.9E-36 T 01-11-2018 IPR022770 Ferric iron reductase FhuF domain D3790_03100 a6d1ead9cb34bb1e105dc6f4667f559f 607 Gene3D G3DSA:1.10.510.40 382 589 4.8E-66 T 01-11-2018 D3790_03100 a6d1ead9cb34bb1e105dc6f4667f559f 607 Pfam PF04183 IucA / IucC family 143 393 3.3E-76 T 01-11-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 D3790_03100 a6d1ead9cb34bb1e105dc6f4667f559f 607 Gene3D G3DSA:1.10.274.90 3 133 1.4E-43 T 01-11-2018 D3790_00375 f52c0db8518170b6139dd3a17d6a4fd1 565 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 215 528 2.9E-90 T 01-11-2018 IPR005565 Haemolysin activator HlyB, C-terminal D3790_00375 f52c0db8518170b6139dd3a17d6a4fd1 565 Pfam PF08479 POTRA domain, ShlB-type 84 157 8.3E-22 T 01-11-2018 IPR013686 Polypeptide-transport-associated, ShlB-type D3790_00375 f52c0db8518170b6139dd3a17d6a4fd1 565 Pfam PF17287 POTRA domain 158 210 2.1E-20 T 01-11-2018 IPR035251 ShlB, POTRA domain D3790_00375 f52c0db8518170b6139dd3a17d6a4fd1 565 PIRSF PIRSF029745 3 565 9.8E-136 T 01-11-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 D3790_00375 f52c0db8518170b6139dd3a17d6a4fd1 565 Gene3D G3DSA:2.40.160.50 187 565 7.0E-84 T 01-11-2018 D3790_00375 f52c0db8518170b6139dd3a17d6a4fd1 565 Gene3D G3DSA:3.10.20.310 73 157 8.7E-13 T 01-11-2018 D3790_18315 b1a0d9022d18127940885deab1fdcec8 251 Gene3D G3DSA:3.40.50.1010 1 160 1.7E-59 T 01-11-2018 D3790_18315 b1a0d9022d18127940885deab1fdcec8 251 Gene3D G3DSA:1.10.150.20 161 250 4.2E-28 T 01-11-2018 D3790_18315 b1a0d9022d18127940885deab1fdcec8 251 Hamap MF_01192 Flap endonuclease Xni [xni]. 1 250 44.578 T 01-11-2018 IPR022895 Flap endonuclease Xni GO:0048256 D3790_18315 b1a0d9022d18127940885deab1fdcec8 251 SUPERFAMILY SSF88723 3 158 1.47E-40 T 01-11-2018 IPR029060 PIN-like domain superfamily D3790_18315 b1a0d9022d18127940885deab1fdcec8 251 SUPERFAMILY SSF47807 159 245 8.82E-25 T 01-11-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily D3790_18315 b1a0d9022d18127940885deab1fdcec8 251 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 153 4.2E-32 T 01-11-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 D3790_18315 b1a0d9022d18127940885deab1fdcec8 251 SMART SM00279 161 196 5.0E-11 T 01-11-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 D3790_18315 b1a0d9022d18127940885deab1fdcec8 251 SMART SM00475 2 249 3.2E-92 T 01-11-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 D3790_18315 b1a0d9022d18127940885deab1fdcec8 251 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 159 249 2.5E-26 T 01-11-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 D3790_12210 67d978b3bdb382fcc5c28e483138a538 318 Pfam PF01548 Transposase 7 152 7.5E-18 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D3790_12210 67d978b3bdb382fcc5c28e483138a538 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 194 277 7.7E-18 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D3790_12825 114f7ae231f9a12d1f0f68f8720983e4 450 Gene3D G3DSA:1.20.1250.20 240 448 2.5E-61 T 01-11-2018 D3790_12825 114f7ae231f9a12d1f0f68f8720983e4 450 Gene3D G3DSA:1.20.1250.20 18 226 2.3E-58 T 01-11-2018 D3790_12825 114f7ae231f9a12d1f0f68f8720983e4 450 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 2.0E-164 T 01-11-2018 D3790_12825 114f7ae231f9a12d1f0f68f8720983e4 450 PIRSF PIRSF002808 5 449 7.8E-172 T 01-11-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 D3790_12825 114f7ae231f9a12d1f0f68f8720983e4 450 SUPERFAMILY SSF103473 13 442 9.42E-84 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_12825 114f7ae231f9a12d1f0f68f8720983e4 450 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 2.5E-260 T 01-11-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 D3790_12825 114f7ae231f9a12d1f0f68f8720983e4 450 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 01-11-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 D3790_12825 114f7ae231f9a12d1f0f68f8720983e4 450 Pfam PF07690 Major Facilitator Superfamily 34 400 9.7E-46 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_03525 00d2f8ac48872ad44aba99745155a135 701 Gene3D G3DSA:1.20.1560.10 128 442 5.3E-70 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_03525 00d2f8ac48872ad44aba99745155a135 701 Pfam PF03412 Peptidase C39 family 38 122 1.0E-6 T 01-11-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 D3790_03525 00d2f8ac48872ad44aba99745155a135 701 SUPERFAMILY SSF90123 129 440 2.62E-61 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_03525 00d2f8ac48872ad44aba99745155a135 701 Gene3D G3DSA:3.40.50.300 450 700 3.0E-89 T 01-11-2018 D3790_03525 00d2f8ac48872ad44aba99745155a135 701 SUPERFAMILY SSF52540 446 690 6.35E-89 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_03525 00d2f8ac48872ad44aba99745155a135 701 Gene3D G3DSA:3.90.70.10 17 127 7.6E-13 T 01-11-2018 D3790_03525 00d2f8ac48872ad44aba99745155a135 701 ProSitePatterns PS00211 ABC transporters family signature. 592 606 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_03525 00d2f8ac48872ad44aba99745155a135 701 Pfam PF00005 ABC transporter 472 620 2.0E-36 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_03525 00d2f8ac48872ad44aba99745155a135 701 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 26 691 1.2E-235 T 01-11-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 D3790_03525 00d2f8ac48872ad44aba99745155a135 701 SMART SM00382 480 665 1.0E-17 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_03525 00d2f8ac48872ad44aba99745155a135 701 Pfam PF00664 ABC transporter transmembrane region 143 411 1.3E-44 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D3790_13005 a90db0214647534e3a407d5c895aa9c7 255 SUPERFAMILY SSF110399 1 238 3.79E-82 T 01-11-2018 D3790_13005 a90db0214647534e3a407d5c895aa9c7 255 Gene3D G3DSA:3.20.20.70 1 253 4.1E-109 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_13005 a90db0214647534e3a407d5c895aa9c7 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 42.194 T 01-11-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 D3790_13005 a90db0214647534e3a407d5c895aa9c7 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 1.9E-107 T 01-11-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 D3790_06040 b09add1ca7d1d9207e906d721cce6211 447 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 443 2.6E-140 T 01-11-2018 IPR010263 Type VI secretion protein, VC_A0114 D3790_06040 b09add1ca7d1d9207e906d721cce6211 447 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 441 1.3E-148 T 01-11-2018 IPR010263 Type VI secretion protein, VC_A0114 D3790_10270 65464b750bdd762dbc800f4ef455e9ba 711 SMART SM00491 545 677 3.6E-29 T 01-11-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 D3790_10270 65464b750bdd762dbc800f4ef455e9ba 711 SMART SM00487 23 291 0.0031 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_10270 65464b750bdd762dbc800f4ef455e9ba 711 Gene3D G3DSA:3.40.50.300 500 690 1.8E-20 T 01-11-2018 D3790_10270 65464b750bdd762dbc800f4ef455e9ba 711 SUPERFAMILY SSF52540 13 666 1.36E-16 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_10270 65464b750bdd762dbc800f4ef455e9ba 711 Gene3D G3DSA:3.40.50.300 27 291 3.2E-42 T 01-11-2018 D3790_10270 65464b750bdd762dbc800f4ef455e9ba 711 Pfam PF13307 Helicase C-terminal domain 532 688 2.4E-24 T 01-11-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 D3790_10270 65464b750bdd762dbc800f4ef455e9ba 711 SMART SM00488 25 308 8.3E-4 T 01-11-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 D3790_10270 65464b750bdd762dbc800f4ef455e9ba 711 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 34 696 34.29 T 01-11-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 D3790_10270 65464b750bdd762dbc800f4ef455e9ba 711 Pfam PF06733 DEAD_2 192 263 8.1E-9 T 01-11-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 D3790_10065 306b0c713882a6fc4891385e52da78ef 206 SUPERFAMILY SSF52833 1 84 4.23E-23 T 01-11-2018 IPR036249 Thioredoxin-like superfamily D3790_10065 306b0c713882a6fc4891385e52da78ef 206 Gene3D G3DSA:1.20.1050.10 84 201 2.9E-38 T 01-11-2018 D3790_10065 306b0c713882a6fc4891385e52da78ef 206 SUPERFAMILY SSF47616 79 201 1.5E-32 T 01-11-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D3790_10065 306b0c713882a6fc4891385e52da78ef 206 Pfam PF13410 Glutathione S-transferase, C-terminal domain 127 189 2.3E-9 T 01-11-2018 D3790_10065 306b0c713882a6fc4891385e52da78ef 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 1.0E-14 T 01-11-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 D3790_10065 306b0c713882a6fc4891385e52da78ef 206 Gene3D G3DSA:3.40.30.10 1 83 2.8E-31 T 01-11-2018 D3790_15090 5f2fc84c77c8eebc462556d317fd8a1a 138 SUPERFAMILY SSF143100 1 63 1.11E-17 T 01-11-2018 IPR035069 TTHA1013/TTHA0281-like D3790_15090 5f2fc84c77c8eebc462556d317fd8a1a 138 Gene3D G3DSA:3.30.160.250 1 76 1.7E-17 T 01-11-2018 D3790_15090 5f2fc84c77c8eebc462556d317fd8a1a 138 Gene3D G3DSA:1.10.260.40 79 138 1.3E-6 T 01-11-2018 D3790_15090 5f2fc84c77c8eebc462556d317fd8a1a 138 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 65 3.2E-10 T 01-11-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system D3790_15090 5f2fc84c77c8eebc462556d317fd8a1a 138 SUPERFAMILY SSF47413 86 136 2.1E-6 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_03035 60958c98281ec5f60fe5712a636c6891 243 Gene3D G3DSA:1.25.40.10 30 243 6.4E-60 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_03035 60958c98281ec5f60fe5712a636c6891 243 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 242 37.362 T 01-11-2018 IPR017689 Outer membrane protein assembly factor BamD D3790_03035 60958c98281ec5f60fe5712a636c6891 243 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 241 4.5E-85 T 01-11-2018 IPR017689 Outer membrane protein assembly factor BamD D3790_03035 60958c98281ec5f60fe5712a636c6891 243 Pfam PF13525 Outer membrane lipoprotein 28 237 7.8E-85 T 01-11-2018 IPR039565 Outer membrane lipoprotein BamD-like D3790_03035 60958c98281ec5f60fe5712a636c6891 243 SUPERFAMILY SSF48452 34 121 1.68E-9 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_01350 ef4ea6a77078a13b0cb2d46e0ef0faa9 229 SUPERFAMILY SSF53335 31 191 2.09E-28 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_01350 ef4ea6a77078a13b0cb2d46e0ef0faa9 229 Gene3D G3DSA:3.40.50.150 12 208 1.4E-29 T 01-11-2018 D3790_01350 ef4ea6a77078a13b0cb2d46e0ef0faa9 229 Pfam PF13649 Methyltransferase domain 56 142 4.2E-13 T 01-11-2018 D3790_10790 73aed50986cddd738009d15362811d2a 290 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 01-11-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 D3790_10790 73aed50986cddd738009d15362811d2a 290 SUPERFAMILY SSF50182 114 179 2.71E-16 T 01-11-2018 IPR010920 LSM domain superfamily D3790_10790 73aed50986cddd738009d15362811d2a 290 SUPERFAMILY SSF82689 181 279 3.27E-30 T 01-11-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 D3790_10790 73aed50986cddd738009d15362811d2a 290 Gene3D G3DSA:3.30.70.100 179 273 1.4E-24 T 01-11-2018 D3790_10790 73aed50986cddd738009d15362811d2a 290 Pfam PF00924 Mechanosensitive ion channel 71 268 6.2E-56 T 01-11-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 D3790_10790 73aed50986cddd738009d15362811d2a 290 Pfam PF05552 Conserved TM helix 16 64 3.6E-15 T 01-11-2018 IPR008910 Conserved TM helix D3790_10790 73aed50986cddd738009d15362811d2a 290 SUPERFAMILY SSF82861 27 112 1.09E-17 T 01-11-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 D3790_10790 73aed50986cddd738009d15362811d2a 290 Gene3D G3DSA:2.30.30.60 129 177 2.3E-18 T 01-11-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily D3790_10410 9d25f800e9e3bc513ccc8a9dcde26f11 180 Pfam PF13302 Acetyltransferase (GNAT) domain 9 150 1.0E-34 T 01-11-2018 IPR000182 GNAT domain D3790_10410 9d25f800e9e3bc513ccc8a9dcde26f11 180 Gene3D G3DSA:3.40.630.30 2 159 1.7E-45 T 01-11-2018 D3790_10410 9d25f800e9e3bc513ccc8a9dcde26f11 180 SUPERFAMILY SSF55729 3 153 6.16E-42 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_04505 52f2a5e198cc6a3c6b143d3b85b5b76e 166 Pfam PF11066 Protein of unknown function (DUF2867) 30 159 5.0E-24 T 01-11-2018 IPR021295 Protein of unknown function DUF2867 D3790_01210 a71d4fcb47dd16eb7f47b07f0f3243db 335 Gene3D G3DSA:1.10.150.130 3 111 9.6E-8 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal D3790_01210 a71d4fcb47dd16eb7f47b07f0f3243db 335 SUPERFAMILY SSF56349 10 317 1.03E-37 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_01210 a71d4fcb47dd16eb7f47b07f0f3243db 335 Gene3D G3DSA:1.10.443.10 112 327 5.0E-26 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_01210 a71d4fcb47dd16eb7f47b07f0f3243db 335 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 16 92 2.3E-6 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 D3790_01210 a71d4fcb47dd16eb7f47b07f0f3243db 335 Pfam PF00589 Phage integrase family 157 315 2.5E-19 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D3790_01430 f1659a00d617168f226eda047c71132f 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 1.1E-196 T 01-11-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 D3790_01430 f1659a00d617168f226eda047c71132f 433 PIRSF PIRSF004539 1 433 1.1E-174 T 01-11-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 D3790_01430 f1659a00d617168f226eda047c71132f 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 1.5E-141 T 01-11-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 D3790_02215 496d5961e0afeb7c9afcfa7bc795bdfc 211 PIRSF PIRSF016938 1 204 6.9E-26 T 01-11-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 D3790_02215 496d5961e0afeb7c9afcfa7bc795bdfc 211 SUPERFAMILY SSF89069 1 66 5.62E-18 T 01-11-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 D3790_02215 496d5961e0afeb7c9afcfa7bc795bdfc 211 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 135 189 5.3E-18 T 01-11-2018 IPR005573 Anti sigma-E protein RseA, C-terminal D3790_02215 496d5961e0afeb7c9afcfa7bc795bdfc 211 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 86 2.6E-34 T 01-11-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 D3790_02215 496d5961e0afeb7c9afcfa7bc795bdfc 211 Gene3D G3DSA:1.10.10.880 1 66 1.3E-25 T 01-11-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 D3790_12625 ee2f472f0566ca616f45d4fe0c8a8634 316 Pfam PF00288 GHMP kinases N terminal domain 92 157 4.8E-12 T 01-11-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 D3790_12625 ee2f472f0566ca616f45d4fe0c8a8634 316 PRINTS PR00958 Homoserine kinase signature 261 276 8.2E-33 T 01-11-2018 D3790_12625 ee2f472f0566ca616f45d4fe0c8a8634 316 PRINTS PR00958 Homoserine kinase signature 104 119 8.2E-33 T 01-11-2018 D3790_12625 ee2f472f0566ca616f45d4fe0c8a8634 316 PRINTS PR00958 Homoserine kinase signature 182 199 8.2E-33 T 01-11-2018 D3790_12625 ee2f472f0566ca616f45d4fe0c8a8634 316 PRINTS PR00958 Homoserine kinase signature 16 31 8.2E-33 T 01-11-2018 D3790_12625 ee2f472f0566ca616f45d4fe0c8a8634 316 PRINTS PR00958 Homoserine kinase signature 144 157 8.2E-33 T 01-11-2018 D3790_12625 ee2f472f0566ca616f45d4fe0c8a8634 316 Hamap MF_00384 Homoserine kinase [thrB]. 11 315 28.367 T 01-11-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 D3790_12625 ee2f472f0566ca616f45d4fe0c8a8634 316 PIRSF PIRSF000676 6 316 8.0E-81 T 01-11-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 D3790_12625 ee2f472f0566ca616f45d4fe0c8a8634 316 SUPERFAMILY SSF55060 180 296 7.44E-32 T 01-11-2018 IPR036554 GHMP kinase, C-terminal domain superfamily D3790_12625 ee2f472f0566ca616f45d4fe0c8a8634 316 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 97 108 - T 01-11-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 D3790_12625 ee2f472f0566ca616f45d4fe0c8a8634 316 Pfam PF08544 GHMP kinases C terminal 229 294 4.0E-9 T 01-11-2018 IPR013750 GHMP kinase, C-terminal domain D3790_12625 ee2f472f0566ca616f45d4fe0c8a8634 316 Gene3D G3DSA:3.30.70.890 175 284 4.5E-95 T 01-11-2018 IPR036554 GHMP kinase, C-terminal domain superfamily D3790_12625 ee2f472f0566ca616f45d4fe0c8a8634 316 Gene3D G3DSA:3.30.230.10 11 174 4.5E-95 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3790_12625 ee2f472f0566ca616f45d4fe0c8a8634 316 SUPERFAMILY SSF54211 7 167 2.05E-32 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_12625 ee2f472f0566ca616f45d4fe0c8a8634 316 TIGRFAM TIGR00191 thrB: homoserine kinase 9 315 7.7E-108 T 01-11-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 D3790_07210 ff57ae6bd8af5bd4d8f3c848b932e387 420 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 9 16 - T 01-11-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D3790_07210 ff57ae6bd8af5bd4d8f3c848b932e387 420 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 420 121.705 T 01-11-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D3790_07210 ff57ae6bd8af5bd4d8f3c848b932e387 420 SMART SM00788 2 417 1.3E-176 T 01-11-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D3790_07210 ff57ae6bd8af5bd4d8f3c848b932e387 420 Gene3D G3DSA:3.90.170.10 261 420 1.4E-56 T 01-11-2018 D3790_07210 ff57ae6bd8af5bd4d8f3c848b932e387 420 SUPERFAMILY SSF52540 3 419 4.67E-122 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_07210 ff57ae6bd8af5bd4d8f3c848b932e387 420 Pfam PF00709 Adenylosuccinate synthetase 4 415 4.7E-130 T 01-11-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D3790_07210 ff57ae6bd8af5bd4d8f3c848b932e387 420 Gene3D G3DSA:3.40.440.10 5 251 7.4E-69 T 01-11-2018 D3790_07210 ff57ae6bd8af5bd4d8f3c848b932e387 420 Gene3D G3DSA:1.10.300.10 96 196 7.4E-69 T 01-11-2018 D3790_08900 8dfea6ba9157ae1dac0b8f0bc3dc8c9e 350 ProSitePatterns PS00482 Dihydroorotase signature 1. 15 23 - T 01-11-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_08900 8dfea6ba9157ae1dac0b8f0bc3dc8c9e 350 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 01-11-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_08900 8dfea6ba9157ae1dac0b8f0bc3dc8c9e 350 PIRSF PIRSF001237 4 349 1.5E-139 T 01-11-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_08900 8dfea6ba9157ae1dac0b8f0bc3dc8c9e 350 SUPERFAMILY SSF51556 7 346 6.01E-144 T 01-11-2018 IPR032466 Metal-dependent hydrolase D3790_08900 8dfea6ba9157ae1dac0b8f0bc3dc8c9e 350 Gene3D G3DSA:3.20.20.140 6 348 3.3E-108 T 01-11-2018 D3790_08900 8dfea6ba9157ae1dac0b8f0bc3dc8c9e 350 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 7.5E-147 T 01-11-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_08900 8dfea6ba9157ae1dac0b8f0bc3dc8c9e 350 Pfam PF01979 Amidohydrolase family 15 313 1.1E-17 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 D3790_08900 8dfea6ba9157ae1dac0b8f0bc3dc8c9e 350 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 45.603 T 01-11-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D3790_07450 8d6d7ffabbced5d1f061543ce12980b5 144 PRINTS PR00502 NUDIX hydrolase family signature 33 47 7.1E-5 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D3790_07450 8d6d7ffabbced5d1f061543ce12980b5 144 PRINTS PR00502 NUDIX hydrolase family signature 47 62 7.1E-5 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D3790_07450 8d6d7ffabbced5d1f061543ce12980b5 144 SUPERFAMILY SSF55811 2 142 4.06E-24 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D3790_07450 8d6d7ffabbced5d1f061543ce12980b5 144 Gene3D G3DSA:3.90.79.10 1 144 7.0E-43 T 01-11-2018 D3790_07450 8d6d7ffabbced5d1f061543ce12980b5 144 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D3790_07450 8d6d7ffabbced5d1f061543ce12980b5 144 Pfam PF00293 NUDIX domain 6 139 2.9E-18 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D3790_07450 8d6d7ffabbced5d1f061543ce12980b5 144 PRINTS PR01404 DATP pyrophosphohydrolase signature 99 120 1.2E-45 T 01-11-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 D3790_07450 8d6d7ffabbced5d1f061543ce12980b5 144 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 1.2E-45 T 01-11-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 D3790_07450 8d6d7ffabbced5d1f061543ce12980b5 144 PRINTS PR01404 DATP pyrophosphohydrolase signature 3 20 1.2E-45 T 01-11-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 D3790_07450 8d6d7ffabbced5d1f061543ce12980b5 144 PRINTS PR01404 DATP pyrophosphohydrolase signature 20 41 1.2E-45 T 01-11-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 D3790_07450 8d6d7ffabbced5d1f061543ce12980b5 144 PRINTS PR01404 DATP pyrophosphohydrolase signature 71 90 1.2E-45 T 01-11-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 D3790_16765 f485dba235b43b3feb77ac83c080d64d 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 12.579 T 01-11-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D3790_16765 f485dba235b43b3feb77ac83c080d64d 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 2.1E-35 T 01-11-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 D3790_16765 f485dba235b43b3feb77ac83c080d64d 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 2.1E-35 T 01-11-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 D3790_16765 f485dba235b43b3feb77ac83c080d64d 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 2.1E-35 T 01-11-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 D3790_16765 f485dba235b43b3feb77ac83c080d64d 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 2.1E-35 T 01-11-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 D3790_16765 f485dba235b43b3feb77ac83c080d64d 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 1.3E-19 T 01-11-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D3790_16765 f485dba235b43b3feb77ac83c080d64d 127 Gene3D G3DSA:1.20.5.1030 66 123 7.2E-16 T 01-11-2018 IPR038379 SecE superfamily D3790_16765 f485dba235b43b3feb77ac83c080d64d 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 70 123 8.6E-17 T 01-11-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 D3790_16765 f485dba235b43b3feb77ac83c080d64d 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 01-11-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D3790_04345 151cb87bbfd2e0815c95f08398acca10 250 PRINTS PR01805 VacJ lipoprotein signature 139 156 1.1E-31 T 01-11-2018 IPR007428 MlaA lipoprotein GO:0016020 D3790_04345 151cb87bbfd2e0815c95f08398acca10 250 PRINTS PR01805 VacJ lipoprotein signature 100 117 1.1E-31 T 01-11-2018 IPR007428 MlaA lipoprotein GO:0016020 D3790_04345 151cb87bbfd2e0815c95f08398acca10 250 PRINTS PR01805 VacJ lipoprotein signature 31 44 1.1E-31 T 01-11-2018 IPR007428 MlaA lipoprotein GO:0016020 D3790_04345 151cb87bbfd2e0815c95f08398acca10 250 PRINTS PR01805 VacJ lipoprotein signature 49 65 1.1E-31 T 01-11-2018 IPR007428 MlaA lipoprotein GO:0016020 D3790_04345 151cb87bbfd2e0815c95f08398acca10 250 Pfam PF04333 MlaA lipoprotein 30 223 1.4E-65 T 01-11-2018 IPR007428 MlaA lipoprotein GO:0016020 D3790_13250 ea07ae1470bf8694cb63058ce3860c29 141 SUPERFAMILY SSF55166 43 121 1.45E-20 T 01-11-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 D3790_13250 ea07ae1470bf8694cb63058ce3860c29 141 Pfam PF01427 D-ala-D-ala dipeptidase 43 121 5.9E-11 T 01-11-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 D3790_13250 ea07ae1470bf8694cb63058ce3860c29 141 Gene3D G3DSA:3.30.1380.10 40 122 4.4E-21 T 01-11-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 D3790_11255 4e64b79d7fe87200011c3d8eaacd4a9f 455 Pfam PF07690 Major Facilitator Superfamily 20 354 4.0E-41 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_11255 4e64b79d7fe87200011c3d8eaacd4a9f 455 Gene3D G3DSA:1.20.1250.20 3 389 1.3E-100 T 01-11-2018 D3790_11255 4e64b79d7fe87200011c3d8eaacd4a9f 455 SUPERFAMILY SSF103473 1 391 2.22E-62 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_11255 4e64b79d7fe87200011c3d8eaacd4a9f 455 Gene3D G3DSA:3.30.70.100 390 453 6.9E-23 T 01-11-2018 D3790_08590 a34941b0050ef246fa1d2d02a64dac66 205 SUPERFAMILY SSF52172 1 128 3.27E-24 T 01-11-2018 IPR011006 CheY-like superfamily D3790_08590 a34941b0050ef246fa1d2d02a64dac66 205 SMART SM00421 140 197 3.2E-19 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_08590 a34941b0050ef246fa1d2d02a64dac66 205 Pfam PF00072 Response regulator receiver domain 4 113 7.5E-22 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_08590 a34941b0050ef246fa1d2d02a64dac66 205 Gene3D G3DSA:3.40.50.12740 2 201 1.7E-49 T 01-11-2018 D3790_08590 a34941b0050ef246fa1d2d02a64dac66 205 SUPERFAMILY SSF46894 127 199 8.84E-18 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D3790_08590 a34941b0050ef246fa1d2d02a64dac66 205 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_08590 a34941b0050ef246fa1d2d02a64dac66 205 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 5.4E-18 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_08590 a34941b0050ef246fa1d2d02a64dac66 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 6.1E-11 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_08590 a34941b0050ef246fa1d2d02a64dac66 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 6.1E-11 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_08590 a34941b0050ef246fa1d2d02a64dac66 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 6.1E-11 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_08590 a34941b0050ef246fa1d2d02a64dac66 205 SMART SM00448 2 112 1.8E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_03670 4772a12cfb7de5db1dce9b122249ad1f 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 2.1E-31 T 01-11-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_03670 4772a12cfb7de5db1dce9b122249ad1f 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3790_03670 4772a12cfb7de5db1dce9b122249ad1f 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 3.3E-10 T 01-11-2018 D3790_03670 4772a12cfb7de5db1dce9b122249ad1f 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 5.6E-90 T 01-11-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_03670 4772a12cfb7de5db1dce9b122249ad1f 238 SUPERFAMILY SSF46548 107 237 2.44E-39 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 D3790_03670 4772a12cfb7de5db1dce9b122249ad1f 238 SUPERFAMILY SSF54292 1 106 9.53E-31 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D3790_03670 4772a12cfb7de5db1dce9b122249ad1f 238 Gene3D G3DSA:3.10.20.30 1 106 4.8E-34 T 01-11-2018 IPR012675 Beta-grasp domain superfamily D3790_03670 4772a12cfb7de5db1dce9b122249ad1f 238 Gene3D G3DSA:1.10.1060.10 107 238 2.0E-58 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 D3790_11825 fa71c5e96896495181190c1d29c4ef13 305 Pfam PF04754 Putative transposase, YhgA-like 9 208 4.1E-74 T 01-11-2018 IPR006842 Transposase (putative), YhgA-like D3790_11825 fa71c5e96896495181190c1d29c4ef13 305 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 303 2.1E-54 T 01-11-2018 IPR010106 Recombination-promoting nuclease RpnA D3790_01030 3838af9b19720dc2c18df88cb9f829bf 412 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 2.3E-197 T 01-11-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 D3790_01030 3838af9b19720dc2c18df88cb9f829bf 412 Pfam PF03116 NQR2, RnfD, RnfE family 41 405 4.0E-107 T 01-11-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 D3790_01030 3838af9b19720dc2c18df88cb9f829bf 412 PIRSF PIRSF016055 1 412 7.0E-199 T 01-11-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 D3790_01030 3838af9b19720dc2c18df88cb9f829bf 412 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.758 T 01-11-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 D3790_15305 a81d643b201e42382df8e66678afb568 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 217 8.5E-99 T 01-11-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 D3790_15305 a81d643b201e42382df8e66678afb568 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 204 5.8E-93 T 01-11-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 D3790_15305 a81d643b201e42382df8e66678afb568 224 SUPERFAMILY SSF51366 5 218 9.94E-77 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D3790_15305 a81d643b201e42382df8e66678afb568 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 137 159 - T 01-11-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 D3790_15305 a81d643b201e42382df8e66678afb568 224 Gene3D G3DSA:3.20.20.70 6 223 5.5E-85 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_15305 a81d643b201e42382df8e66678afb568 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 01-11-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 D3790_15305 a81d643b201e42382df8e66678afb568 224 PIRSF PIRSF001461 1 224 1.5E-106 T 01-11-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 D3790_00315 7df9ebcd91cf10f09a590152300b1205 109 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 12 105 6.5E-22 T 01-11-2018 IPR019110 Uncharacterised protein family, RAQPRD D3790_00315 7df9ebcd91cf10f09a590152300b1205 109 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 24 103 3.3E-24 T 01-11-2018 IPR019110 Uncharacterised protein family, RAQPRD D3790_00770 7df9ebcd91cf10f09a590152300b1205 109 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 12 105 6.5E-22 T 01-11-2018 IPR019110 Uncharacterised protein family, RAQPRD D3790_00770 7df9ebcd91cf10f09a590152300b1205 109 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 24 103 3.3E-24 T 01-11-2018 IPR019110 Uncharacterised protein family, RAQPRD D3790_15240 d4c4389d11d9ddaf1da811285ffa4c2b 267 SUPERFAMILY SSF74653 167 267 3.01E-21 T 01-11-2018 D3790_15240 d4c4389d11d9ddaf1da811285ffa4c2b 267 Gene3D G3DSA:3.30.1150.10 101 267 5.3E-24 T 01-11-2018 D3790_15240 d4c4389d11d9ddaf1da811285ffa4c2b 267 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 193 266 1.8E-18 T 01-11-2018 IPR006260 TonB/TolA, C-terminal D3790_15240 d4c4389d11d9ddaf1da811285ffa4c2b 267 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 191 266 2.3E-17 T 01-11-2018 IPR037682 TonB, C-terminal GO:0055085 D3790_09905 3c9edf88588db16e291bc04481d5ac42 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 01-11-2018 IPR024002 Formate/nitrite transporter, conserved site D3790_09905 3c9edf88588db16e291bc04481d5ac42 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 15 279 3.4E-123 T 01-11-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 D3790_09905 3c9edf88588db16e291bc04481d5ac42 285 Gene3D G3DSA:1.20.1080.10 1 268 2.0E-100 T 01-11-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 D3790_09905 3c9edf88588db16e291bc04481d5ac42 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 27 280 2.8E-89 T 01-11-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 D3790_09905 3c9edf88588db16e291bc04481d5ac42 285 Pfam PF01226 Formate/nitrite transporter 16 276 4.0E-75 T 01-11-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 D3790_15165 1801b6c26d03de5fd76910f1e4e39002 259 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 84 3.2E-14 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_15165 1801b6c26d03de5fd76910f1e4e39002 259 SMART SM00345 25 84 2.0E-14 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_15165 1801b6c26d03de5fd76910f1e4e39002 259 SUPERFAMILY SSF46785 15 88 2.12E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_15165 1801b6c26d03de5fd76910f1e4e39002 259 SMART SM00866 104 240 1.3E-24 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 D3790_15165 1801b6c26d03de5fd76910f1e4e39002 259 Gene3D G3DSA:1.10.10.10 11 85 9.5E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_15165 1801b6c26d03de5fd76910f1e4e39002 259 Gene3D G3DSA:3.40.1410.10 88 243 3.2E-35 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily D3790_15165 1801b6c26d03de5fd76910f1e4e39002 259 SUPERFAMILY SSF64288 72 242 1.49E-39 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily D3790_15165 1801b6c26d03de5fd76910f1e4e39002 259 Pfam PF07702 UTRA domain 105 239 7.0E-33 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 D3790_15165 1801b6c26d03de5fd76910f1e4e39002 259 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 5.5E-9 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_15165 1801b6c26d03de5fd76910f1e4e39002 259 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 5.5E-9 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_11620 6697f59f90be7e43fab07c6b63e5dc43 290 SUPERFAMILY SSF46689 16 136 2.78E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_11620 6697f59f90be7e43fab07c6b63e5dc43 290 Gene3D G3DSA:3.30.420.470 139 284 4.5E-6 T 01-11-2018 D3790_11620 6697f59f90be7e43fab07c6b63e5dc43 290 Pfam PF13358 DDE superfamily endonuclease 176 284 4.6E-23 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_11620 6697f59f90be7e43fab07c6b63e5dc43 290 Pfam PF13592 Winged helix-turn helix 103 161 9.6E-17 T 01-11-2018 IPR025959 Winged helix-turn helix domain D3790_11620 6697f59f90be7e43fab07c6b63e5dc43 290 Pfam PF13384 Homeodomain-like domain 20 64 8.7E-12 T 01-11-2018 D3790_17315 be93afc8db1e51c284f8fdaa4bbbf056 427 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 01-11-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 D3790_17315 be93afc8db1e51c284f8fdaa4bbbf056 427 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 421 52.182 T 01-11-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 D3790_17315 be93afc8db1e51c284f8fdaa4bbbf056 427 Pfam PF00464 Serine hydroxymethyltransferase 9 386 8.4E-188 T 01-11-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 D3790_17315 be93afc8db1e51c284f8fdaa4bbbf056 427 SUPERFAMILY SSF53383 6 408 4.68E-179 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_17315 be93afc8db1e51c284f8fdaa4bbbf056 427 Gene3D G3DSA:3.40.640.10 37 289 3.1E-187 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_17315 be93afc8db1e51c284f8fdaa4bbbf056 427 PIRSF PIRSF000412 1 422 6.7E-171 T 01-11-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 D3790_17315 be93afc8db1e51c284f8fdaa4bbbf056 427 Gene3D G3DSA:3.90.1150.10 10 395 3.1E-187 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_06940 6c760bcf841e378ecaa5df8393a2d2f8 2530 Pfam PF12920 TcdA/TcdB pore forming domain 1152 1828 6.7E-302 T 01-11-2018 IPR024769 TcdA/TcdB toxin, pore forming domain GO:0009405 D3790_06940 6c760bcf841e378ecaa5df8393a2d2f8 2530 Gene3D G3DSA:3.40.50.11050 902 1106 9.6E-58 T 01-11-2018 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily D3790_06940 6c760bcf841e378ecaa5df8393a2d2f8 2530 Pfam PF11713 Peptidase C80 family 936 1090 1.2E-33 T 01-11-2018 IPR020974 CGT/MARTX, cysteine protease (CPD) domain D3790_15540 016422f1376889d9e64ccc6fb8a1f998 372 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 148 358 2.1E-57 T 01-11-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D3790_15540 016422f1376889d9e64ccc6fb8a1f998 372 PIRSF PIRSF000148 1 372 5.1E-67 T 01-11-2018 D3790_15540 016422f1376889d9e64ccc6fb8a1f998 372 SUPERFAMILY SSF55347 138 359 5.24E-77 T 01-11-2018 D3790_15540 016422f1376889d9e64ccc6fb8a1f998 372 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 125 5.0E-24 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 D3790_15540 016422f1376889d9e64ccc6fb8a1f998 372 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 266 280 - T 01-11-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D3790_15540 016422f1376889d9e64ccc6fb8a1f998 372 SUPERFAMILY SSF51735 1 151 1.29E-50 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_15540 016422f1376889d9e64ccc6fb8a1f998 372 Gene3D G3DSA:3.30.360.10 139 355 8.6E-145 T 01-11-2018 D3790_15540 016422f1376889d9e64ccc6fb8a1f998 372 Gene3D G3DSA:3.40.50.720 4 361 8.6E-145 T 01-11-2018 D3790_15540 016422f1376889d9e64ccc6fb8a1f998 372 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 372 1.4E-205 T 01-11-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D3790_15540 016422f1376889d9e64ccc6fb8a1f998 372 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 372 33.517 T 01-11-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D3790_15540 016422f1376889d9e64ccc6fb8a1f998 372 SMART SM00859 3 126 5.0E-27 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 D3790_13065 13ef40ea8a474013b0bb0da89ff0b1d1 64 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 55 7.5E-8 T 01-11-2018 IPR009241 Toxin HigB-like D3790_04795 038e06d63811577ffdf3be4e66844f94 181 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 37 181 6.0E-51 T 01-11-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04795 038e06d63811577ffdf3be4e66844f94 181 SUPERFAMILY SSF52833 30 180 1.57E-48 T 01-11-2018 IPR036249 Thioredoxin-like superfamily D3790_04795 038e06d63811577ffdf3be4e66844f94 181 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 38 181 1.1E-49 T 01-11-2018 D3790_04795 038e06d63811577ffdf3be4e66844f94 181 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 138 156 - T 01-11-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04795 038e06d63811577ffdf3be4e66844f94 181 PIRSF PIRSF000216 12 181 1.4E-51 T 01-11-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04795 038e06d63811577ffdf3be4e66844f94 181 Gene3D G3DSA:3.40.30.10 98 180 6.8E-23 T 01-11-2018 D3790_04795 038e06d63811577ffdf3be4e66844f94 181 Gene3D G3DSA:1.10.10.1590 28 97 2.2E-17 T 01-11-2018 D3790_15040 0757d6e0fcc946d4b150dc619248b834 420 Pfam PF13440 Polysaccharide biosynthesis protein 31 326 3.9E-34 T 01-11-2018 D3790_16360 c5a2f04eab2bd93e35df3470860054c3 391 Pfam PF01168 Alanine racemase, N-terminal domain 33 264 8.9E-19 T 01-11-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_16360 c5a2f04eab2bd93e35df3470860054c3 391 Gene3D G3DSA:3.20.20.10 99 251 1.3E-151 T 01-11-2018 IPR029066 PLP-binding barrel D3790_16360 c5a2f04eab2bd93e35df3470860054c3 391 SUPERFAMILY SSF51419 34 265 2.78E-26 T 01-11-2018 IPR029066 PLP-binding barrel D3790_16360 c5a2f04eab2bd93e35df3470860054c3 391 Gene3D G3DSA:2.40.37.30 8 382 1.3E-151 T 01-11-2018 D3790_10365 df72773620466294ce6cf32b93edcf4f 211 Gene3D G3DSA:2.40.50.230 2 87 1.5E-33 T 01-11-2018 IPR037026 Vgr protein, OB-fold domain superfamily D3790_10365 df72773620466294ce6cf32b93edcf4f 211 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 117 4.3E-47 T 01-11-2018 IPR006531 Gp5 N-terminal D3790_10365 df72773620466294ce6cf32b93edcf4f 211 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 209 1.3E-66 T 01-11-2018 IPR013046 Phage baseplate assembly protein V/Gp45 D3790_10365 df72773620466294ce6cf32b93edcf4f 211 Gene3D G3DSA:2.60.220.40 89 161 6.4E-33 T 01-11-2018 D3790_14250 2cd0d3ed29fabd078596bdf03f21fc8a 201 SUPERFAMILY SSF52166 10 200 3.01E-73 T 01-11-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 D3790_14250 2cd0d3ed29fabd078596bdf03f21fc8a 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 1.6E-64 T 01-11-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 D3790_14250 2cd0d3ed29fabd078596bdf03f21fc8a 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 34.034 T 01-11-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14250 2cd0d3ed29fabd078596bdf03f21fc8a 201 Gene3D G3DSA:3.40.1370.10 1 201 2.1E-69 T 01-11-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 D3790_14250 2cd0d3ed29fabd078596bdf03f21fc8a 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 1.9E-75 T 01-11-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14565 23e9ee42c3c39740d33cee48a9907fab 507 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 268 457 7.3E-63 T 01-11-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 D3790_14565 23e9ee42c3c39740d33cee48a9907fab 507 Gene3D G3DSA:3.30.420.40 261 507 1.6E-96 T 01-11-2018 D3790_14565 23e9ee42c3c39740d33cee48a9907fab 507 Hamap MF_00186 Glycerol kinase [glpK]. 9 504 59.433 T 01-11-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 D3790_14565 23e9ee42c3c39740d33cee48a9907fab 507 Gene3D G3DSA:3.30.420.40 7 260 1.0E-113 T 01-11-2018 D3790_14565 23e9ee42c3c39740d33cee48a9907fab 507 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 10 503 6.1E-228 T 01-11-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 D3790_14565 23e9ee42c3c39740d33cee48a9907fab 507 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 142 154 - T 01-11-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 D3790_14565 23e9ee42c3c39740d33cee48a9907fab 507 PIRSF PIRSF000538 9 507 2.3E-177 T 01-11-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 D3790_14565 23e9ee42c3c39740d33cee48a9907fab 507 SUPERFAMILY SSF53067 10 262 2.7E-93 T 01-11-2018 D3790_14565 23e9ee42c3c39740d33cee48a9907fab 507 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 369 389 - T 01-11-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 D3790_14565 23e9ee42c3c39740d33cee48a9907fab 507 SUPERFAMILY SSF53067 262 503 1.68E-86 T 01-11-2018 D3790_14565 23e9ee42c3c39740d33cee48a9907fab 507 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 11 259 5.7E-88 T 01-11-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 D3790_06405 5c9df7e1a04a07916231ddffdf2c553b 454 SUPERFAMILY SSF51366 258 451 9.1E-59 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D3790_06405 5c9df7e1a04a07916231ddffdf2c553b 454 Gene3D G3DSA:3.20.20.70 257 447 7.6E-183 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_06405 5c9df7e1a04a07916231ddffdf2c553b 454 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 51 69 - T 01-11-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 D3790_06405 5c9df7e1a04a07916231ddffdf2c553b 454 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 256 453 30.019 T 01-11-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 D3790_06405 5c9df7e1a04a07916231ddffdf2c553b 454 Pfam PF00218 Indole-3-glycerol phosphate synthase 6 253 3.5E-94 T 01-11-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 D3790_06405 5c9df7e1a04a07916231ddffdf2c553b 454 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 258 449 2.7E-57 T 01-11-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 D3790_06405 5c9df7e1a04a07916231ddffdf2c553b 454 SUPERFAMILY SSF51366 13 255 2.12E-81 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D3790_06405 5c9df7e1a04a07916231ddffdf2c553b 454 Gene3D G3DSA:3.20.20.70 9 256 7.6E-183 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_06405 5c9df7e1a04a07916231ddffdf2c553b 454 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 4 255 35.005 T 01-11-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 D3790_06855 c46d85a6e3d6061edfc5ce4b3ced5f36 260 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 33 211 1.6E-40 T 01-11-2018 IPR001303 Class II aldolase/adducin N-terminal D3790_06855 c46d85a6e3d6061edfc5ce4b3ced5f36 260 Gene3D G3DSA:3.40.225.10 17 258 2.4E-56 T 01-11-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily D3790_06855 c46d85a6e3d6061edfc5ce4b3ced5f36 260 SMART SM01007 33 211 3.2E-47 T 01-11-2018 IPR001303 Class II aldolase/adducin N-terminal D3790_06855 c46d85a6e3d6061edfc5ce4b3ced5f36 260 SUPERFAMILY SSF53639 26 242 1.71E-65 T 01-11-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily D3790_02035 4952a8b14cafe552293268b5e8f2c3b4 50 SUPERFAMILY SSF141452 4 49 3.14E-5 T 01-11-2018 IPR036624 Hcp1-like superfamily D3790_02035 4952a8b14cafe552293268b5e8f2c3b4 50 Gene3D G3DSA:2.30.110.20 2 50 1.3E-15 T 01-11-2018 IPR036624 Hcp1-like superfamily D3790_02035 4952a8b14cafe552293268b5e8f2c3b4 50 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 49 2.8E-19 T 01-11-2018 IPR008514 Type VI secretion system effector, Hcp D3790_15590 ccf3fe0a8360cc20efc33a26f9ffa57b 85 SMART SM01234 8 75 2.4E-42 T 01-11-2018 IPR002696 Putative membrane protein insertion efficiency factor D3790_15590 ccf3fe0a8360cc20efc33a26f9ffa57b 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.446 T 01-11-2018 IPR002696 Putative membrane protein insertion efficiency factor D3790_15590 ccf3fe0a8360cc20efc33a26f9ffa57b 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 83 5.4E-34 T 01-11-2018 IPR002696 Putative membrane protein insertion efficiency factor D3790_15590 ccf3fe0a8360cc20efc33a26f9ffa57b 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 75 3.0E-25 T 01-11-2018 IPR002696 Putative membrane protein insertion efficiency factor D3790_15590 ccf3fe0a8360cc20efc33a26f9ffa57b 85 Pfam PF01809 Haemolytic domain 10 75 3.8E-30 T 01-11-2018 IPR002696 Putative membrane protein insertion efficiency factor D3790_08880 9e5dda29640dc8ab74abf02c05eaed87 194 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 174 1.5E-83 T 01-11-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 D3790_08880 9e5dda29640dc8ab74abf02c05eaed87 194 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 187 2.0E-109 T 01-11-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 D3790_08880 9e5dda29640dc8ab74abf02c05eaed87 194 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 188 46.83 T 01-11-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 D3790_08880 9e5dda29640dc8ab74abf02c05eaed87 194 SUPERFAMILY SSF160930 5 162 5.89E-66 T 01-11-2018 D3790_08880 9e5dda29640dc8ab74abf02c05eaed87 194 PIRSF PIRSF003159 1 183 1.6E-90 T 01-11-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 D3790_00060 81e198f30554f2c217332dbf1312c3e2 249 Pfam PF00929 Exonuclease 9 173 2.5E-39 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D3790_00060 81e198f30554f2c217332dbf1312c3e2 249 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 1.2E-92 T 01-11-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_00060 81e198f30554f2c217332dbf1312c3e2 249 SMART SM00479 7 184 1.5E-45 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D3790_00060 81e198f30554f2c217332dbf1312c3e2 249 Gene3D G3DSA:3.20.20.140 210 249 5.8E-8 T 01-11-2018 D3790_00060 81e198f30554f2c217332dbf1312c3e2 249 Gene3D G3DSA:3.30.420.10 1 190 1.3E-59 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_00060 81e198f30554f2c217332dbf1312c3e2 249 SUPERFAMILY SSF53098 7 185 1.27E-52 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_00060 81e198f30554f2c217332dbf1312c3e2 249 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 225 7.1E-88 T 01-11-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_19735 81e198f30554f2c217332dbf1312c3e2 249 Pfam PF00929 Exonuclease 9 173 2.5E-39 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D3790_19735 81e198f30554f2c217332dbf1312c3e2 249 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 1.2E-92 T 01-11-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_19735 81e198f30554f2c217332dbf1312c3e2 249 SMART SM00479 7 184 1.5E-45 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D3790_19735 81e198f30554f2c217332dbf1312c3e2 249 Gene3D G3DSA:3.20.20.140 210 249 5.8E-8 T 01-11-2018 D3790_19735 81e198f30554f2c217332dbf1312c3e2 249 Gene3D G3DSA:3.30.420.10 1 190 1.3E-59 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_19735 81e198f30554f2c217332dbf1312c3e2 249 SUPERFAMILY SSF53098 7 185 1.27E-52 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_19735 81e198f30554f2c217332dbf1312c3e2 249 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 225 7.1E-88 T 01-11-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_17960 55bdfc95b4609473139eb29c2c11bd02 582 SMART SM00493 259 330 1.8E-20 T 01-11-2018 IPR006171 TOPRIM domain D3790_17960 55bdfc95b4609473139eb29c2c11bd02 582 SUPERFAMILY SSF56731 116 427 1.13E-113 T 01-11-2018 D3790_17960 55bdfc95b4609473139eb29c2c11bd02 582 SUPERFAMILY SSF57783 4 100 7.14E-36 T 01-11-2018 D3790_17960 55bdfc95b4609473139eb29c2c11bd02 582 Hamap MF_00974 DNA primase [dnaG]. 4 577 29.797 T 01-11-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 D3790_17960 55bdfc95b4609473139eb29c2c11bd02 582 Pfam PF08278 DNA primase DnaG DnaB-binding 452 573 2.8E-33 T 01-11-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 D3790_17960 55bdfc95b4609473139eb29c2c11bd02 582 SMART SM00766 451 576 1.5E-41 T 01-11-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 D3790_17960 55bdfc95b4609473139eb29c2c11bd02 582 SUPERFAMILY SSF117023 448 575 1.44E-40 T 01-11-2018 D3790_17960 55bdfc95b4609473139eb29c2c11bd02 582 TIGRFAM TIGR01391 dnaG: DNA primase 4 417 5.3E-149 T 01-11-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 D3790_17960 55bdfc95b4609473139eb29c2c11bd02 582 Gene3D G3DSA:1.20.50.20 368 426 1.2E-23 T 01-11-2018 D3790_17960 55bdfc95b4609473139eb29c2c11bd02 582 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 9.6E-44 T 01-11-2018 IPR013264 DNA primase, catalytic core, N-terminal D3790_17960 55bdfc95b4609473139eb29c2c11bd02 582 Gene3D G3DSA:3.40.1360.10 241 367 8.5E-44 T 01-11-2018 D3790_17960 55bdfc95b4609473139eb29c2c11bd02 582 Gene3D G3DSA:3.90.980.10 115 240 1.5E-47 T 01-11-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily D3790_17960 55bdfc95b4609473139eb29c2c11bd02 582 Gene3D G3DSA:3.90.580.10 1 101 5.7E-37 T 01-11-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 D3790_17960 55bdfc95b4609473139eb29c2c11bd02 582 Gene3D G3DSA:1.10.860.10 436 582 5.5E-50 T 01-11-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal D3790_17960 55bdfc95b4609473139eb29c2c11bd02 582 Pfam PF13155 Toprim-like 263 348 6.7E-14 T 01-11-2018 D3790_17960 55bdfc95b4609473139eb29c2c11bd02 582 PIRSF PIRSF002811 2 577 1.1E-144 T 01-11-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 D3790_17960 55bdfc95b4609473139eb29c2c11bd02 582 Pfam PF10410 DnaB-helicase binding domain of primase 369 423 7.3E-13 T 01-11-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 D3790_17960 55bdfc95b4609473139eb29c2c11bd02 582 Pfam PF01807 CHC2 zinc finger 6 100 1.0E-38 T 01-11-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 D3790_17960 55bdfc95b4609473139eb29c2c11bd02 582 SMART SM00400 36 90 1.1E-37 T 01-11-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 D3790_00630 a14b9578fbd494d9332b0fd985eca06e 811 Gene3D G3DSA:1.10.10.10 703 802 3.2E-37 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_00630 a14b9578fbd494d9332b0fd985eca06e 811 SMART SM00778 53 92 2.3E-9 T 01-11-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 D3790_00630 a14b9578fbd494d9332b0fd985eca06e 811 Gene3D G3DSA:3.40.50.300 487 666 1.2E-12 T 01-11-2018 D3790_00630 a14b9578fbd494d9332b0fd985eca06e 811 Pfam PF03288 Poxvirus D5 protein-like 704 799 1.9E-11 T 01-11-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal D3790_00630 a14b9578fbd494d9332b0fd985eca06e 811 SUPERFAMILY SSF52540 463 672 4.93E-14 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_00630 a14b9578fbd494d9332b0fd985eca06e 811 SUPERFAMILY SSF46785 704 794 7.62E-33 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_00630 a14b9578fbd494d9332b0fd985eca06e 811 SMART SM00885 368 502 1.2E-21 T 01-11-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal D3790_00630 a14b9578fbd494d9332b0fd985eca06e 811 Pfam PF08706 D5 N terminal like 369 498 1.0E-9 T 01-11-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal D3790_00630 a14b9578fbd494d9332b0fd985eca06e 811 Gene3D G3DSA:3.90.580.10 45 121 1.6E-5 T 01-11-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 D3790_00630 a14b9578fbd494d9332b0fd985eca06e 811 Pfam PF13362 Toprim domain 219 323 6.4E-9 T 01-11-2018 IPR006171 TOPRIM domain D3790_00630 a14b9578fbd494d9332b0fd985eca06e 811 SUPERFAMILY SSF57783 37 122 1.62E-11 T 01-11-2018 D3790_00630 a14b9578fbd494d9332b0fd985eca06e 811 Pfam PF08273 Zinc-binding domain of primase-helicase 53 92 4.4E-9 T 01-11-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 D3790_10395 1c4451aa4e4c7675da2620acf2da6da6 647 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 134 462 7.4E-107 T 01-11-2018 IPR008766 Replication gene A protein GO:0006260 D3790_13405 57b72cb4620ef1272be2deb47d213eb9 158 Gene3D G3DSA:1.10.287.180 1 75 2.9E-33 T 01-11-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 D3790_13405 57b72cb4620ef1272be2deb47d213eb9 158 Gene3D G3DSA:3.10.50.30 76 158 1.8E-31 T 01-11-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 D3790_13405 57b72cb4620ef1272be2deb47d213eb9 158 SUPERFAMILY SSF46557 3 78 3.66E-29 T 01-11-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 D3790_13405 57b72cb4620ef1272be2deb47d213eb9 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 2.4E-59 T 01-11-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 D3790_13405 57b72cb4620ef1272be2deb47d213eb9 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 5.0E-28 T 01-11-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 D3790_13405 57b72cb4620ef1272be2deb47d213eb9 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 3.1E-32 T 01-11-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 D3790_13405 57b72cb4620ef1272be2deb47d213eb9 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 32.808 T 01-11-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 D3790_13405 57b72cb4620ef1272be2deb47d213eb9 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 01-11-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 D3790_13405 57b72cb4620ef1272be2deb47d213eb9 158 PIRSF PIRSF006092 1 158 9.6E-54 T 01-11-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 D3790_13405 57b72cb4620ef1272be2deb47d213eb9 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 01-11-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 D3790_13405 57b72cb4620ef1272be2deb47d213eb9 158 SUPERFAMILY SSF54534 81 157 6.54E-24 T 01-11-2018 D3790_15195 0189f1f09ede4fb12185b8631658137e 101 Pfam PF01845 CcdB protein 2 100 6.0E-33 T 01-11-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 D3790_15195 0189f1f09ede4fb12185b8631658137e 101 SUPERFAMILY SSF50118 1 101 1.57E-31 T 01-11-2018 D3790_15195 0189f1f09ede4fb12185b8631658137e 101 Gene3D G3DSA:2.30.30.110 1 101 7.8E-35 T 01-11-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor D3790_15195 0189f1f09ede4fb12185b8631658137e 101 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 14 100 1.0E-30 T 01-11-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 D3790_04315 d9242b9ac9e5d5333c926bbf244d5567 180 Pfam PF01713 Smr domain 98 171 2.0E-16 T 01-11-2018 IPR002625 Smr domain D3790_04315 d9242b9ac9e5d5333c926bbf244d5567 180 SUPERFAMILY SSF160443 96 150 5.89E-9 T 01-11-2018 IPR036063 Smr domain superfamily D3790_04315 d9242b9ac9e5d5333c926bbf244d5567 180 SMART SM00463 95 173 6.6E-19 T 01-11-2018 IPR002625 Smr domain D3790_04315 d9242b9ac9e5d5333c926bbf244d5567 180 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 39.641 T 01-11-2018 IPR022990 Uncharacterised protein family UPF0115 D3790_04315 d9242b9ac9e5d5333c926bbf244d5567 180 Gene3D G3DSA:3.30.1370.110 50 177 6.9E-27 T 01-11-2018 D3790_04090 770dfe9b8ccabe79454b41e6a6576627 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 4.9E-23 T 01-11-2018 IPR009857 Uncharacterised protein family UPF0352 D3790_04090 770dfe9b8ccabe79454b41e6a6576627 75 PIRSF PIRSF006188 1 72 5.1E-33 T 01-11-2018 IPR009857 Uncharacterised protein family UPF0352 D3790_04090 770dfe9b8ccabe79454b41e6a6576627 75 Gene3D G3DSA:1.10.3390.10 1 75 1.5E-34 T 01-11-2018 IPR023202 YejL-like superfamily D3790_04090 770dfe9b8ccabe79454b41e6a6576627 75 SUPERFAMILY SSF158651 1 75 1.7E-30 T 01-11-2018 IPR023202 YejL-like superfamily D3790_04090 770dfe9b8ccabe79454b41e6a6576627 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 22.148 T 01-11-2018 IPR009857 Uncharacterised protein family UPF0352 D3790_04090 770dfe9b8ccabe79454b41e6a6576627 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 1.0E-27 T 01-11-2018 IPR009857 Uncharacterised protein family UPF0352 D3790_09725 53792f20a86df726f07e4294dfb3097f 208 Gene3D G3DSA:3.40.50.10610 47 205 5.4E-7 T 01-11-2018 D3790_09725 53792f20a86df726f07e4294dfb3097f 208 SUPERFAMILY SSF159594 35 206 2.17E-25 T 01-11-2018 D3790_09725 53792f20a86df726f07e4294dfb3097f 208 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 59 201 8.0E-33 T 01-11-2018 IPR005586 ABC-type transport auxiliary lipoprotein component D3790_11940 d39b6b5f9145dd5f50f7030800c6bb50 586 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 374 398 - T 01-11-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 D3790_11940 d39b6b5f9145dd5f50f7030800c6bb50 586 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 33 544 2.0E-175 T 01-11-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 D3790_11940 d39b6b5f9145dd5f50f7030800c6bb50 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 245 261 1.8E-76 T 01-11-2018 D3790_11940 d39b6b5f9145dd5f50f7030800c6bb50 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 55 80 1.8E-76 T 01-11-2018 D3790_11940 d39b6b5f9145dd5f50f7030800c6bb50 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 374 392 1.8E-76 T 01-11-2018 D3790_11940 d39b6b5f9145dd5f50f7030800c6bb50 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 463 480 1.8E-76 T 01-11-2018 D3790_11940 d39b6b5f9145dd5f50f7030800c6bb50 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 398 416 1.8E-76 T 01-11-2018 D3790_11940 d39b6b5f9145dd5f50f7030800c6bb50 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 439 454 1.8E-76 T 01-11-2018 D3790_11940 d39b6b5f9145dd5f50f7030800c6bb50 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 128 146 1.8E-76 T 01-11-2018 D3790_11940 d39b6b5f9145dd5f50f7030800c6bb50 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 146 165 1.8E-76 T 01-11-2018 D3790_11940 d39b6b5f9145dd5f50f7030800c6bb50 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 275 294 1.8E-76 T 01-11-2018 D3790_11940 d39b6b5f9145dd5f50f7030800c6bb50 586 Pfam PF01019 Gamma-glutamyltranspeptidase 48 566 2.8E-183 T 01-11-2018 D3790_11940 d39b6b5f9145dd5f50f7030800c6bb50 586 Gene3D G3DSA:3.60.20.40 374 578 5.2E-68 T 01-11-2018 D3790_11940 d39b6b5f9145dd5f50f7030800c6bb50 586 Gene3D G3DSA:1.10.246.130 261 372 1.8E-42 T 01-11-2018 D3790_11940 d39b6b5f9145dd5f50f7030800c6bb50 586 SUPERFAMILY SSF56235 24 585 1.58E-185 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D3790_01630 d9ecd35350c5970d8be055cb72d8e660 541 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 113 119 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D3790_01630 d9ecd35350c5970d8be055cb72d8e660 541 SUPERFAMILY SSF53335 7 228 8.93E-34 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_01630 d9ecd35350c5970d8be055cb72d8e660 541 Gene3D G3DSA:3.40.50.150 16 230 1.2E-37 T 01-11-2018 D3790_01630 d9ecd35350c5970d8be055cb72d8e660 541 Pfam PF02384 N-6 DNA Methylase 7 223 6.2E-17 T 01-11-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 D3790_01630 d9ecd35350c5970d8be055cb72d8e660 541 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 14 30 4.7E-21 T 01-11-2018 D3790_01630 d9ecd35350c5970d8be055cb72d8e660 541 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 149 173 4.7E-21 T 01-11-2018 D3790_01630 d9ecd35350c5970d8be055cb72d8e660 541 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 110 122 4.7E-21 T 01-11-2018 D3790_01630 d9ecd35350c5970d8be055cb72d8e660 541 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 38 52 4.7E-21 T 01-11-2018 D3790_06485 6644480306e61165e72cbbf759416ac4 901 Pfam PF00694 Aconitase C-terminal domain 701 828 4.1E-49 T 01-11-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 D3790_06485 6644480306e61165e72cbbf759416ac4 901 PRINTS PR00415 Aconitase family signature 227 242 5.1E-42 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D3790_06485 6644480306e61165e72cbbf759416ac4 901 PRINTS PR00415 Aconitase family signature 303 316 5.1E-42 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D3790_06485 6644480306e61165e72cbbf759416ac4 901 PRINTS PR00415 Aconitase family signature 213 226 5.1E-42 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D3790_06485 6644480306e61165e72cbbf759416ac4 901 PRINTS PR00415 Aconitase family signature 180 188 5.1E-42 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D3790_06485 6644480306e61165e72cbbf759416ac4 901 PRINTS PR00415 Aconitase family signature 503 516 5.1E-42 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D3790_06485 6644480306e61165e72cbbf759416ac4 901 PRINTS PR00415 Aconitase family signature 156 169 5.1E-42 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D3790_06485 6644480306e61165e72cbbf759416ac4 901 PRINTS PR00415 Aconitase family signature 382 396 5.1E-42 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D3790_06485 6644480306e61165e72cbbf759416ac4 901 PRINTS PR00415 Aconitase family signature 289 302 5.1E-42 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D3790_06485 6644480306e61165e72cbbf759416ac4 901 PRINTS PR00415 Aconitase family signature 441 452 5.1E-42 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D3790_06485 6644480306e61165e72cbbf759416ac4 901 Gene3D G3DSA:3.20.19.10 662 901 2.1E-107 T 01-11-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 D3790_06485 6644480306e61165e72cbbf759416ac4 901 ProSitePatterns PS01244 Aconitase family signature 2. 503 516 - T 01-11-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 D3790_06485 6644480306e61165e72cbbf759416ac4 901 SUPERFAMILY SSF53732 21 636 8.37E-223 T 01-11-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 D3790_06485 6644480306e61165e72cbbf759416ac4 901 Gene3D G3DSA:3.30.499.10 383 600 3.3E-99 T 01-11-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 D3790_06485 6644480306e61165e72cbbf759416ac4 901 ProSitePatterns PS00450 Aconitase family signature 1. 437 453 - T 01-11-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 D3790_06485 6644480306e61165e72cbbf759416ac4 901 SUPERFAMILY SSF52016 640 900 3.14E-89 T 01-11-2018 D3790_06485 6644480306e61165e72cbbf759416ac4 901 Pfam PF00330 Aconitase family (aconitate hydratase) 79 572 8.1E-182 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D3790_06485 6644480306e61165e72cbbf759416ac4 901 Gene3D G3DSA:1.10.1440.20 601 661 3.8E-18 T 01-11-2018 D3790_06485 6644480306e61165e72cbbf759416ac4 901 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 28 900 0.0 T 01-11-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 D3790_06485 6644480306e61165e72cbbf759416ac4 901 Gene3D G3DSA:3.30.499.20 17 382 1.1E-158 T 01-11-2018 D3790_14645 49eca1321b495a9f631e8a316f182ad5 906 Pfam PF13362 Toprim domain 221 315 1.6E-9 T 01-11-2018 IPR006171 TOPRIM domain D3790_14645 49eca1321b495a9f631e8a316f182ad5 906 Pfam PF08273 Zinc-binding domain of primase-helicase 45 81 6.2E-15 T 01-11-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 D3790_14645 49eca1321b495a9f631e8a316f182ad5 906 SUPERFAMILY SSF57783 29 101 1.12E-8 T 01-11-2018 D3790_14645 49eca1321b495a9f631e8a316f182ad5 906 SMART SM00778 45 81 8.7E-15 T 01-11-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 D3790_14645 49eca1321b495a9f631e8a316f182ad5 906 Pfam PF06048 Domain of unknown function (DUF927) 342 625 8.1E-99 T 01-11-2018 IPR009270 Domain of unknown function DUF927 D3790_18760 d19521d1b3416c6698e01949289a43cb 760 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 285 291 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D3790_18760 d19521d1b3416c6698e01949289a43cb 760 Gene3D G3DSA:1.20.1260.30 1 79 4.2E-5 T 01-11-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily D3790_18760 d19521d1b3416c6698e01949289a43cb 760 Pfam PF02384 N-6 DNA Methylase 155 462 2.2E-52 T 01-11-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 D3790_18760 d19521d1b3416c6698e01949289a43cb 760 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 210 224 2.8E-10 T 01-11-2018 D3790_18760 d19521d1b3416c6698e01949289a43cb 760 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 282 294 2.8E-10 T 01-11-2018 D3790_18760 d19521d1b3416c6698e01949289a43cb 760 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 178 194 2.8E-10 T 01-11-2018 D3790_18760 d19521d1b3416c6698e01949289a43cb 760 SUPERFAMILY SSF53335 8 552 4.07E-110 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_18760 d19521d1b3416c6698e01949289a43cb 760 Pfam PF12161 HsdM N-terminal domain 11 143 3.1E-20 T 01-11-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain D3790_18760 d19521d1b3416c6698e01949289a43cb 760 Gene3D G3DSA:3.40.50.150 157 479 5.1E-87 T 01-11-2018 D3790_00145 161741f79c5af15e4039524409ac67b4 87 Pfam PF05488 PAAR motif 10 79 7.6E-20 T 01-11-2018 IPR008727 PAAR motif D3790_00145 161741f79c5af15e4039524409ac67b4 87 Gene3D G3DSA:2.60.200.60 18 86 2.3E-6 T 01-11-2018 D3790_18440 920a7158cc003023be8fb5fbbd158ea3 796 Gene3D G3DSA:3.10.20.310 20 91 1.9E-20 T 01-11-2018 D3790_18440 920a7158cc003023be8fb5fbbd158ea3 796 Gene3D G3DSA:3.10.20.310 92 174 1.2E-15 T 01-11-2018 D3790_18440 920a7158cc003023be8fb5fbbd158ea3 796 Gene3D G3DSA:3.10.20.310 265 346 2.1E-16 T 01-11-2018 D3790_18440 920a7158cc003023be8fb5fbbd158ea3 796 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 796 25.888 T 01-11-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 D3790_18440 920a7158cc003023be8fb5fbbd158ea3 796 Pfam PF07244 Surface antigen variable number repeat 176 263 4.9E-16 T 01-11-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 D3790_18440 920a7158cc003023be8fb5fbbd158ea3 796 Pfam PF07244 Surface antigen variable number repeat 266 344 2.4E-11 T 01-11-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 D3790_18440 920a7158cc003023be8fb5fbbd158ea3 796 Pfam PF07244 Surface antigen variable number repeat 348 421 5.0E-14 T 01-11-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 D3790_18440 920a7158cc003023be8fb5fbbd158ea3 796 Pfam PF07244 Surface antigen variable number repeat 92 172 2.2E-10 T 01-11-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 D3790_18440 920a7158cc003023be8fb5fbbd158ea3 796 Gene3D G3DSA:3.10.20.310 175 264 6.2E-24 T 01-11-2018 D3790_18440 920a7158cc003023be8fb5fbbd158ea3 796 PIRSF PIRSF006076 1 796 2.3E-253 T 01-11-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 D3790_18440 920a7158cc003023be8fb5fbbd158ea3 796 Gene3D G3DSA:3.10.20.310 347 425 3.9E-26 T 01-11-2018 D3790_18440 920a7158cc003023be8fb5fbbd158ea3 796 Pfam PF01103 Surface antigen 448 796 1.6E-99 T 01-11-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 D3790_18440 920a7158cc003023be8fb5fbbd158ea3 796 Gene3D G3DSA:2.40.160.50 426 796 3.9E-140 T 01-11-2018 D3790_18440 920a7158cc003023be8fb5fbbd158ea3 796 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 796 2.7E-283 T 01-11-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 D3790_06680 099ab13eac20dc16dd92531c00f0f620 464 Pfam PF00206 Lyase 12 342 4.3E-118 T 01-11-2018 IPR022761 Fumarate lyase, N-terminal D3790_06680 099ab13eac20dc16dd92531c00f0f620 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 461 1.5E-243 T 01-11-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D3790_06680 099ab13eac20dc16dd92531c00f0f620 464 Gene3D G3DSA:1.10.275.10 5 138 3.8E-54 T 01-11-2018 IPR024083 Fumarase/histidase, N-terminal D3790_06680 099ab13eac20dc16dd92531c00f0f620 464 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 3.0E-33 T 01-11-2018 IPR000362 Fumarate lyase family D3790_06680 099ab13eac20dc16dd92531c00f0f620 464 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 3.0E-33 T 01-11-2018 IPR000362 Fumarate lyase family D3790_06680 099ab13eac20dc16dd92531c00f0f620 464 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 3.0E-33 T 01-11-2018 IPR000362 Fumarate lyase family D3790_06680 099ab13eac20dc16dd92531c00f0f620 464 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 3.0E-33 T 01-11-2018 IPR000362 Fumarate lyase family D3790_06680 099ab13eac20dc16dd92531c00f0f620 464 Gene3D G3DSA:1.20.200.10 139 407 2.8E-121 T 01-11-2018 D3790_06680 099ab13eac20dc16dd92531c00f0f620 464 Pfam PF10415 Fumarase C C-terminus 408 461 1.5E-25 T 01-11-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D3790_06680 099ab13eac20dc16dd92531c00f0f620 464 Gene3D G3DSA:1.10.40.30 408 464 1.4E-30 T 01-11-2018 D3790_06680 099ab13eac20dc16dd92531c00f0f620 464 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 5.5E-5 T 01-11-2018 D3790_06680 099ab13eac20dc16dd92531c00f0f620 464 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 5.5E-5 T 01-11-2018 D3790_06680 099ab13eac20dc16dd92531c00f0f620 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 92.639 T 01-11-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D3790_06680 099ab13eac20dc16dd92531c00f0f620 464 SUPERFAMILY SSF48557 4 462 5.18E-159 T 01-11-2018 IPR008948 L-Aspartase-like GO:0003824 D3790_06680 099ab13eac20dc16dd92531c00f0f620 464 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 01-11-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 D3790_18075 65825308bcc22bc4a2e5a1187f8746d3 473 SUPERFAMILY SSF49503 354 468 2.87E-16 T 01-11-2018 IPR008972 Cupredoxin D3790_18075 65825308bcc22bc4a2e5a1187f8746d3 473 Pfam PF07731 Multicopper oxidase 361 470 3.4E-15 T 01-11-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 D3790_18075 65825308bcc22bc4a2e5a1187f8746d3 473 Gene3D G3DSA:2.60.40.420 348 472 1.1E-22 T 01-11-2018 IPR008972 Cupredoxin D3790_18075 65825308bcc22bc4a2e5a1187f8746d3 473 Gene3D G3DSA:2.60.40.420 166 346 3.1E-55 T 01-11-2018 IPR008972 Cupredoxin D3790_18075 65825308bcc22bc4a2e5a1187f8746d3 473 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 469 55.863 T 01-11-2018 IPR026589 Cell division protein FtsP GO:0043093 D3790_18075 65825308bcc22bc4a2e5a1187f8746d3 473 SUPERFAMILY SSF49503 35 169 1.6E-25 T 01-11-2018 IPR008972 Cupredoxin D3790_18075 65825308bcc22bc4a2e5a1187f8746d3 473 SUPERFAMILY SSF49503 173 287 3.05E-30 T 01-11-2018 IPR008972 Cupredoxin D3790_18075 65825308bcc22bc4a2e5a1187f8746d3 473 Pfam PF07732 Multicopper oxidase 53 168 6.4E-26 T 01-11-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 D3790_18075 65825308bcc22bc4a2e5a1187f8746d3 473 Gene3D G3DSA:2.60.40.420 30 165 1.5E-32 T 01-11-2018 IPR008972 Cupredoxin D3790_00095 e6cc0cd54c71c50ef2776d8ea8ad6e6f 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 252 1.5E-20 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_00095 e6cc0cd54c71c50ef2776d8ea8ad6e6f 259 SUPERFAMILY SSF161098 3 254 5.89E-56 T 01-11-2018 IPR035906 MetI-like superfamily D3790_00095 e6cc0cd54c71c50ef2776d8ea8ad6e6f 259 Gene3D G3DSA:1.10.3720.10 7 258 1.3E-48 T 01-11-2018 IPR035906 MetI-like superfamily D3790_17575 2cdadf5ef1d653e9417a712ba3b58b38 420 Gene3D G3DSA:3.65.10.10 8 413 1.3E-172 T 01-11-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 D3790_17575 2cdadf5ef1d653e9417a712ba3b58b38 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 43.867 T 01-11-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D3790_17575 2cdadf5ef1d653e9417a712ba3b58b38 420 Gene3D G3DSA:3.65.10.10 21 228 1.3E-172 T 01-11-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 D3790_17575 2cdadf5ef1d653e9417a712ba3b58b38 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 1.0E-181 T 01-11-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D3790_17575 2cdadf5ef1d653e9417a712ba3b58b38 420 SUPERFAMILY SSF55205 1 417 1.19E-144 T 01-11-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 D3790_17575 2cdadf5ef1d653e9417a712ba3b58b38 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 1.5E-124 T 01-11-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 D3790_10530 0200db38599ae314589ee9969bce25eb 209 SUPERFAMILY SSF53790 1 204 8.9E-38 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 D3790_10530 0200db38599ae314589ee9969bce25eb 209 Gene3D G3DSA:3.40.1010.10 1 106 1.5E-21 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 D3790_10530 0200db38599ae314589ee9969bce25eb 209 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 4 203 1.2E-56 T 01-11-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 D3790_10530 0200db38599ae314589ee9969bce25eb 209 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 190 1.1E-27 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 D3790_07425 8695407e2e2511a2a80ffb5a0fe81d94 392 TIGRFAM TIGR00238 TIGR00238: KamA family protein 6 330 3.9E-93 T 01-11-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase D3790_07425 8695407e2e2511a2a80ffb5a0fe81d94 392 PIRSF PIRSF004911 2 387 4.7E-140 T 01-11-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase D3790_07425 8695407e2e2511a2a80ffb5a0fe81d94 392 Gene3D G3DSA:3.20.20.70 51 338 3.1E-102 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_07425 8695407e2e2511a2a80ffb5a0fe81d94 392 Pfam PF13353 4Fe-4S single cluster domain 112 219 4.3E-5 T 01-11-2018 D3790_07425 8695407e2e2511a2a80ffb5a0fe81d94 392 TIGRFAM TIGR04468 arg_2_3_am_muta: arginine 2,3-aminomutase 12 362 2.2E-200 T 01-11-2018 IPR031015 Arginine 2,3-aminomutase D3790_07425 8695407e2e2511a2a80ffb5a0fe81d94 392 Pfam PF04055 Radical SAM superfamily 117 273 1.6E-8 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D3790_07425 8695407e2e2511a2a80ffb5a0fe81d94 392 SUPERFAMILY SSF102114 106 328 3.92E-28 T 01-11-2018 D3790_04775 42743d792fa250dac3f398cf72a47af0 180 SUPERFAMILY SSF54862 33 152 3.77E-29 T 01-11-2018 D3790_04775 42743d792fa250dac3f398cf72a47af0 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 7 163 26.826 T 01-11-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04775 42743d792fa250dac3f398cf72a47af0 180 Gene3D G3DSA:3.30.70.3270 33 174 7.6E-43 T 01-11-2018 D3790_04775 42743d792fa250dac3f398cf72a47af0 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3790_04775 42743d792fa250dac3f398cf72a47af0 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 1.5E-11 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3790_04775 42743d792fa250dac3f398cf72a47af0 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 2.8E-51 T 01-11-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_15150 43de6e5503ab4b86967d80ec95526f2a 107 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 5 71 6.6E-25 T 01-11-2018 IPR022789 Antitoxin ParD D3790_15150 43de6e5503ab4b86967d80ec95526f2a 107 Gene3D G3DSA:1.10.8.1250 10 84 1.2E-19 T 01-11-2018 IPR038296 Antitoxin ParD superfamily D3790_15150 43de6e5503ab4b86967d80ec95526f2a 107 SUPERFAMILY SSF47598 4 45 6.56E-9 T 01-11-2018 IPR010985 Ribbon-helix-helix GO:0006355 D3790_15150 43de6e5503ab4b86967d80ec95526f2a 107 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 64 6.4E-19 T 01-11-2018 IPR022789 Antitoxin ParD D3790_06275 ecf1a3818746153e3b3cf8f34c0f8a6c 151 Gene3D G3DSA:3.40.630.30 1 150 3.8E-23 T 01-11-2018 D3790_06275 ecf1a3818746153e3b3cf8f34c0f8a6c 151 SUPERFAMILY SSF55729 1 143 9.41E-27 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_06275 ecf1a3818746153e3b3cf8f34c0f8a6c 151 Pfam PF00583 Acetyltransferase (GNAT) family 42 131 3.0E-14 T 01-11-2018 IPR000182 GNAT domain D3790_07440 27c0cd1adf47ae1d9d03139a5e6abf71 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 2.3E-43 T 01-11-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D3790_07440 27c0cd1adf47ae1d9d03139a5e6abf71 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 2.3E-43 T 01-11-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D3790_07440 27c0cd1adf47ae1d9d03139a5e6abf71 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 2.3E-43 T 01-11-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D3790_07440 27c0cd1adf47ae1d9d03139a5e6abf71 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 2.3E-43 T 01-11-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D3790_07440 27c0cd1adf47ae1d9d03139a5e6abf71 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 2.3E-43 T 01-11-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D3790_07440 27c0cd1adf47ae1d9d03139a5e6abf71 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 3.0E-66 T 01-11-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D3790_07440 27c0cd1adf47ae1d9d03139a5e6abf71 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 01-11-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 D3790_07440 27c0cd1adf47ae1d9d03139a5e6abf71 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 48.095 T 01-11-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D3790_07440 27c0cd1adf47ae1d9d03139a5e6abf71 173 SUPERFAMILY SSF53098 3 157 2.5E-56 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_07440 27c0cd1adf47ae1d9d03139a5e6abf71 173 Gene3D G3DSA:3.30.420.10 2 159 2.3E-55 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_07440 27c0cd1adf47ae1d9d03139a5e6abf71 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 158 7.7E-82 T 01-11-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D3790_12925 b48128a9c31d91104de8722dc9d18817 427 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 421 1.4E-29 T 01-11-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D3790_12925 b48128a9c31d91104de8722dc9d18817 427 SUPERFAMILY SSF51246 329 424 1.94E-32 T 01-11-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 D3790_12925 b48128a9c31d91104de8722dc9d18817 427 SUPERFAMILY SSF52440 1 103 1.44E-36 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily D3790_12925 b48128a9c31d91104de8722dc9d18817 427 Gene3D G3DSA:3.90.600.10 330 424 1.2E-33 T 01-11-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D3790_12925 b48128a9c31d91104de8722dc9d18817 427 SMART SM01210 330 423 7.2E-53 T 01-11-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D3790_12925 b48128a9c31d91104de8722dc9d18817 427 Gene3D G3DSA:3.30.470.20 191 329 5.4E-61 T 01-11-2018 D3790_12925 b48128a9c31d91104de8722dc9d18817 427 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.531 T 01-11-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D3790_12925 b48128a9c31d91104de8722dc9d18817 427 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 1.2E-83 T 01-11-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D3790_12925 b48128a9c31d91104de8722dc9d18817 427 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.2E-34 T 01-11-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D3790_12925 b48128a9c31d91104de8722dc9d18817 427 SMART SM01209 103 296 1.4E-138 T 01-11-2018 D3790_12925 b48128a9c31d91104de8722dc9d18817 427 SUPERFAMILY SSF56059 104 320 5.48E-68 T 01-11-2018 D3790_12925 b48128a9c31d91104de8722dc9d18817 427 Gene3D G3DSA:3.30.1490.20 121 190 8.7E-27 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D3790_12925 b48128a9c31d91104de8722dc9d18817 427 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 01-11-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D3790_12925 b48128a9c31d91104de8722dc9d18817 427 Gene3D G3DSA:3.40.50.20 2 95 5.6E-37 T 01-11-2018 D3790_12925 b48128a9c31d91104de8722dc9d18817 427 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 8.5E-183 T 01-11-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D3790_00105 d29245531295833c0fd311db900acf66 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 34 50 1.6E-91 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 D3790_00105 d29245531295833c0fd311db900acf66 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 206 225 1.6E-91 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 D3790_00105 d29245531295833c0fd311db900acf66 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 151 165 1.6E-91 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 D3790_00105 d29245531295833c0fd311db900acf66 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 50 71 1.6E-91 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 D3790_00105 d29245531295833c0fd311db900acf66 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 125 141 1.6E-91 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 D3790_00105 d29245531295833c0fd311db900acf66 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 78 92 1.6E-91 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 D3790_00105 d29245531295833c0fd311db900acf66 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 169 188 1.6E-91 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 D3790_00105 d29245531295833c0fd311db900acf66 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 94 107 1.6E-91 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 D3790_00105 d29245531295833c0fd311db900acf66 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 250 269 1.6E-91 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 D3790_00105 d29245531295833c0fd311db900acf66 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 295 321 1.6E-91 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 D3790_00105 d29245531295833c0fd311db900acf66 350 PIRSF PIRSF019574 1 350 1.0E-128 T 01-11-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 D3790_00105 d29245531295833c0fd311db900acf66 350 Pfam PF13343 Bacterial extracellular solute-binding protein 79 325 3.9E-40 T 01-11-2018 D3790_00105 d29245531295833c0fd311db900acf66 350 Gene3D G3DSA:3.40.190.10 134 322 4.4E-122 T 01-11-2018 D3790_00105 d29245531295833c0fd311db900acf66 350 SUPERFAMILY SSF53850 28 347 4.6E-96 T 01-11-2018 D3790_00105 d29245531295833c0fd311db900acf66 350 Gene3D G3DSA:3.40.190.10 33 317 4.4E-122 T 01-11-2018 D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 Gene3D G3DSA:3.30.230.10 585 772 1.4E-85 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 Gene3D G3DSA:3.40.50.300 314 490 2.8E-61 T 01-11-2018 D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 Gene3D G3DSA:1.20.58.1480 120 245 4.3E-46 T 01-11-2018 D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 01-11-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 PIRSF PIRSF001174 1 775 0.0 T 01-11-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 3.0E-96 T 01-11-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 SMART SM00382 348 492 1.2E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 8.2E-57 T 01-11-2018 D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 8.2E-57 T 01-11-2018 D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 8.2E-57 T 01-11-2018 D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 8.2E-57 T 01-11-2018 D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 8.2E-57 T 01-11-2018 D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 Gene3D G3DSA:1.10.8.60 491 584 1.4E-32 T 01-11-2018 D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 SUPERFAMILY SSF54211 595 770 8.34E-57 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.559 T 01-11-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 Gene3D G3DSA:2.30.130.40 1 118 2.7E-38 T 01-11-2018 D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 SUPERFAMILY SSF88697 10 201 4.72E-52 T 01-11-2018 IPR015947 PUA-like superfamily D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 1.7E-43 T 01-11-2018 IPR003111 Lon, substrate-binding domain D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 7.3E-18 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 01-11-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 SUPERFAMILY SSF52540 313 586 1.21E-51 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_11325 421fe5027f2ceded9a9fc887c8894825 784 SMART SM00464 10 202 5.0E-82 T 01-11-2018 IPR003111 Lon, substrate-binding domain D3790_07985 1603d7c81aab9a11b87a5bcd6a20de64 210 Pfam PF01527 Transposase 95 141 2.9E-12 T 01-11-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D3790_07985 1603d7c81aab9a11b87a5bcd6a20de64 210 SUPERFAMILY SSF46689 93 139 5.2E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_12150 bc7d4a725718e7ac7a18fa960f44c555 268 SUPERFAMILY SSF51621 3 256 1.95E-84 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D3790_12150 bc7d4a725718e7ac7a18fa960f44c555 268 Gene3D G3DSA:3.20.20.60 1 264 1.8E-94 T 01-11-2018 D3790_12150 bc7d4a725718e7ac7a18fa960f44c555 268 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 6 253 6.8E-129 T 01-11-2018 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 D3790_12150 bc7d4a725718e7ac7a18fa960f44c555 268 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 242 4.4E-64 T 01-11-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 D3790_05930 70b4c9ba387076e2c7d1cc43ee29daa9 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 71 3.7E-20 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_05930 70b4c9ba387076e2c7d1cc43ee29daa9 240 Pfam PF07840 FadR C-terminal domain 72 234 1.4E-72 T 01-11-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 D3790_05930 70b4c9ba387076e2c7d1cc43ee29daa9 240 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 240 158.199 T 01-11-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 D3790_05930 70b4c9ba387076e2c7d1cc43ee29daa9 240 Gene3D G3DSA:1.10.10.10 1 79 5.2E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_05930 70b4c9ba387076e2c7d1cc43ee29daa9 240 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 235 1.8E-121 T 01-11-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 D3790_05930 70b4c9ba387076e2c7d1cc43ee29daa9 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_05930 70b4c9ba387076e2c7d1cc43ee29daa9 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_05930 70b4c9ba387076e2c7d1cc43ee29daa9 240 SUPERFAMILY SSF48008 79 230 6.93E-65 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D3790_05930 70b4c9ba387076e2c7d1cc43ee29daa9 240 SMART SM00345 12 71 1.0E-22 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_05930 70b4c9ba387076e2c7d1cc43ee29daa9 240 Gene3D G3DSA:1.20.120.530 80 238 9.1E-39 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D3790_05930 70b4c9ba387076e2c7d1cc43ee29daa9 240 SUPERFAMILY SSF46785 9 88 1.65E-17 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_04585 d855533b3975ec26dbee5f71b2280365 879 SUPERFAMILY SSF101904 533 863 2.09E-110 T 01-11-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal D3790_04585 d855533b3975ec26dbee5f71b2280365 879 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 806 852 1.5E-13 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D3790_04585 d855533b3975ec26dbee5f71b2280365 879 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 756 802 8.7E-14 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D3790_04585 d855533b3975ec26dbee5f71b2280365 879 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 1.2E-10 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D3790_04585 d855533b3975ec26dbee5f71b2280365 879 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 709 1.4 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D3790_04585 d855533b3975ec26dbee5f71b2280365 879 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 721 750 5.3E-7 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D3790_04585 d855533b3975ec26dbee5f71b2280365 879 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 8.1E-11 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D3790_04585 d855533b3975ec26dbee5f71b2280365 879 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 7.3E-10 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D3790_04585 d855533b3975ec26dbee5f71b2280365 879 Gene3D G3DSA:1.10.268.10 370 493 1.1E-236 T 01-11-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 D3790_04585 d855533b3975ec26dbee5f71b2280365 879 Gene3D G3DSA:2.120.10.90 535 854 1.1E-128 T 01-11-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal D3790_04585 d855533b3975ec26dbee5f71b2280365 879 SUPERFAMILY SSF56719 30 521 4.19E-184 T 01-11-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 D3790_04585 d855533b3975ec26dbee5f71b2280365 879 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 853 0.0 T 01-11-2018 D3790_04585 d855533b3975ec26dbee5f71b2280365 879 Gene3D G3DSA:3.30.1360.40 236 333 1.1E-236 T 01-11-2018 D3790_04585 d855533b3975ec26dbee5f71b2280365 879 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 854 24.777 T 01-11-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D3790_04585 d855533b3975ec26dbee5f71b2280365 879 SMART SM00434 11 499 7.6E-300 T 01-11-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D3790_04585 d855533b3975ec26dbee5f71b2280365 879 Gene3D G3DSA:3.90.199.10 33 520 1.1E-236 T 01-11-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 D3790_04585 d855533b3975ec26dbee5f71b2280365 879 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 4.3E-154 T 01-11-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 Gene3D G3DSA:3.40.50.12780 537 937 2.3E-116 T 01-11-2018 D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 ProSitePatterns PS00455 Putative AMP-binding domain signature. 691 702 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 Gene3D G3DSA:1.10.10.1830 5 58 3.5E-8 T 01-11-2018 D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 PRINTS PR00154 AMP-binding signature 686 697 8.9E-5 T 01-11-2018 IPR020459 AMP-binding D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 PRINTS PR00154 AMP-binding signature 698 706 8.9E-5 T 01-11-2018 IPR020459 AMP-binding D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 Pfam PF00668 Condensation domain 75 526 2.5E-90 T 01-11-2018 IPR001242 Condensation domain D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 Pfam PF13193 AMP-binding enzyme C-terminal domain 951 1024 5.1E-10 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 Gene3D G3DSA:3.30.559.10 78 456 1.7E-117 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 Pfam PF00550 Phosphopantetheine attachment site 1053 1116 2.6E-6 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 Gene3D G3DSA:3.30.559.30 266 511 1.7E-117 T 01-11-2018 D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 Gene3D G3DSA:3.30.300.30 939 1039 1.2E-28 T 01-11-2018 D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 PIRSF PIRSF001617 679 997 5.2E-30 T 01-11-2018 D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 PIRSF PIRSF001617 989 1137 1.6E-5 T 01-11-2018 D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 PIRSF PIRSF001617 270 682 6.8E-22 T 01-11-2018 D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 Pfam PF00501 AMP-binding enzyme 548 943 3.1E-90 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 SUPERFAMILY SSF52777 270 515 2.45E-56 T 01-11-2018 D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 SUPERFAMILY SSF47336 1044 1117 4.06E-11 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 SUPERFAMILY SSF56801 515 1063 1.02E-135 T 01-11-2018 D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 Gene3D G3DSA:1.10.1200.10 1040 1124 6.2E-14 T 01-11-2018 IPR036736 ACP-like superfamily D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 SUPERFAMILY SSF52777 79 262 5.23E-34 T 01-11-2018 D3790_06290 e24d7ca92169ba37ac5a594e30831034 1138 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 568 967 5.3E-117 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_17190 186be27030944b626aeb9d39df38ac33 523 Pfam PF13817 IS66 C-terminal element 479 516 4.4E-15 T 01-11-2018 IPR039552 Transposase IS66, C-terminal D3790_17190 186be27030944b626aeb9d39df38ac33 523 Pfam PF13007 Transposase C of IS166 homeodomain 46 120 1.5E-10 T 01-11-2018 IPR024463 Transposase TnpC, homeodomain D3790_17190 186be27030944b626aeb9d39df38ac33 523 Pfam PF03050 Transposase IS66 family 187 472 5.8E-96 T 01-11-2018 IPR004291 Transposase, IS66 D3790_17190 186be27030944b626aeb9d39df38ac33 523 Pfam PF13005 zinc-finger binding domain of transposase IS66 128 172 2.6E-14 T 01-11-2018 IPR024474 Zinc-finger binding domain of transposase IS66 D3790_13955 f29a2365eef68b6d078ae0deb2e71da8 676 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 2.8E-70 T 01-11-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 D3790_13955 f29a2365eef68b6d078ae0deb2e71da8 676 Gene3D G3DSA:3.40.50.300 274 632 2.6E-134 T 01-11-2018 D3790_13955 f29a2365eef68b6d078ae0deb2e71da8 676 Gene3D G3DSA:1.10.10.160 108 181 5.3E-100 T 01-11-2018 IPR013986 DExx box DNA helicase domain superfamily D3790_13955 f29a2365eef68b6d078ae0deb2e71da8 676 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 40.718 T 01-11-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 D3790_13955 f29a2365eef68b6d078ae0deb2e71da8 676 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 665 0.0 T 01-11-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 D3790_13955 f29a2365eef68b6d078ae0deb2e71da8 676 SUPERFAMILY SSF52540 2 639 5.57E-163 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_13955 f29a2365eef68b6d078ae0deb2e71da8 676 Gene3D G3DSA:1.10.486.10 377 539 2.6E-134 T 01-11-2018 D3790_13955 f29a2365eef68b6d078ae0deb2e71da8 676 Gene3D G3DSA:3.40.50.300 4 266 5.3E-100 T 01-11-2018 D3790_13955 f29a2365eef68b6d078ae0deb2e71da8 676 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 1.2E-74 T 01-11-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 D3790_04070 25769c5ef0f300485cbe33339d827f63 55 Pfam PF03013 Pyrimidine dimer DNA glycosylase 1 52 5.2E-10 T 01-11-2018 IPR004260 Pyrimidine dimer DNA glycosylase D3790_04070 25769c5ef0f300485cbe33339d827f63 55 Gene3D G3DSA:1.10.440.10 1 55 2.1E-10 T 01-11-2018 IPR024796 T4 endonuclease V D3790_04070 25769c5ef0f300485cbe33339d827f63 55 SUPERFAMILY SSF47077 2 55 6.15E-11 T 01-11-2018 D3790_04070 25769c5ef0f300485cbe33339d827f63 55 ProDom PD021350 ENDONUCLEASE PYRIMIDINE GLYCOSYLASE DIMER-SPECIFIC V DNA DENV HYDROLASE V DIMER 10 55 4.0E-4 T 01-11-2018 IPR021143 Pyrimidine dimer DNA glycosylase, endonuclease V type D3790_10905 5c0f4689d264df86ded199201aa4f673 533 SMART SM00382 34 343 0.0026 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_10905 5c0f4689d264df86ded199201aa4f673 533 SMART SM00382 364 532 0.0029 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_10905 5c0f4689d264df86ded199201aa4f673 533 Gene3D G3DSA:3.40.50.300 5 270 3.3E-31 T 01-11-2018 D3790_10905 5c0f4689d264df86ded199201aa4f673 533 Gene3D G3DSA:3.40.50.300 307 529 2.7E-37 T 01-11-2018 D3790_10905 5c0f4689d264df86ded199201aa4f673 533 Pfam PF00005 ABC transporter 358 485 2.7E-17 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_10905 5c0f4689d264df86ded199201aa4f673 533 Pfam PF00005 ABC transporter 36 174 1.1E-12 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_10905 5c0f4689d264df86ded199201aa4f673 533 SUPERFAMILY SSF52540 344 519 3.39E-33 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_10905 5c0f4689d264df86ded199201aa4f673 533 SUPERFAMILY SSF52540 9 214 1.25E-27 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16285 e4b145dffff345220eeb8d8d21b368e3 177 Gene3D G3DSA:2.30.110.10 4 151 5.4E-12 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 D3790_16285 e4b145dffff345220eeb8d8d21b368e3 177 SUPERFAMILY SSF50475 1 150 6.17E-13 T 01-11-2018 D3790_02920 97ddd39383d6b80df54deffd9fc6566e 167 Pfam PF02464 Competence-damaged protein 8 163 7.9E-56 T 01-11-2018 IPR008136 CinA, C-terminal D3790_02920 97ddd39383d6b80df54deffd9fc6566e 167 SUPERFAMILY SSF142433 9 164 2.22E-55 T 01-11-2018 IPR036653 CinA-like, C-terminal D3790_02920 97ddd39383d6b80df54deffd9fc6566e 167 Gene3D G3DSA:3.90.950.20 1 165 2.8E-59 T 01-11-2018 IPR036653 CinA-like, C-terminal D3790_02920 97ddd39383d6b80df54deffd9fc6566e 167 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 161 3.4E-55 T 01-11-2018 IPR008136 CinA, C-terminal D3790_18940 cbee9c2819561d0ced9b3602c0ac47a6 251 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 64 79 - T 01-11-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 D3790_18940 cbee9c2819561d0ced9b3602c0ac47a6 251 Gene3D G3DSA:3.40.50.1580 1 251 2.3E-78 T 01-11-2018 D3790_18940 cbee9c2819561d0ced9b3602c0ac47a6 251 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 4 251 4.6E-120 T 01-11-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 D3790_18940 cbee9c2819561d0ced9b3602c0ac47a6 251 SUPERFAMILY SSF53167 4 247 6.41E-72 T 01-11-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 D3790_18940 cbee9c2819561d0ced9b3602c0ac47a6 251 Pfam PF01048 Phosphorylase superfamily 19 224 1.4E-39 T 01-11-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 D3790_14090 14a5637dce50c98ffee5a6a855556200 362 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 65 281 1.2E-81 T 01-11-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 D3790_14090 14a5637dce50c98ffee5a6a855556200 362 Pfam PF02481 DNA recombination-mediator protein A 67 273 1.2E-75 T 01-11-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 D3790_14090 14a5637dce50c98ffee5a6a855556200 362 Gene3D G3DSA:1.10.10.10 289 361 1.1E-6 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_14090 14a5637dce50c98ffee5a6a855556200 362 SUPERFAMILY SSF102405 76 282 7.94E-42 T 01-11-2018 D3790_14090 14a5637dce50c98ffee5a6a855556200 362 Gene3D G3DSA:3.40.50.450 13 288 4.6E-91 T 01-11-2018 D3790_16355 e25b076862ca412339f7cbcdb2963984 341 Gene3D G3DSA:3.20.20.140 48 338 5.8E-100 T 01-11-2018 D3790_16355 e25b076862ca412339f7cbcdb2963984 341 SUPERFAMILY SSF51556 50 337 1.05E-90 T 01-11-2018 IPR032466 Metal-dependent hydrolase D3790_16355 e25b076862ca412339f7cbcdb2963984 341 Pfam PF02126 Phosphotriesterase family 50 338 2.3E-95 T 01-11-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 D3790_16355 e25b076862ca412339f7cbcdb2963984 341 PIRSF PIRSF016839 37 340 8.0E-121 T 01-11-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 D3790_17135 be93e95d2ce141b7a302cedf94ba0fea 518 SUPERFAMILY SSF161098 265 507 6.41E-58 T 01-11-2018 IPR035906 MetI-like superfamily D3790_17135 be93e95d2ce141b7a302cedf94ba0fea 518 Gene3D G3DSA:1.20.58.370 2 96 1.1E-34 T 01-11-2018 IPR035277 MalF, N-terminal D3790_17135 be93e95d2ce141b7a302cedf94ba0fea 518 SUPERFAMILY SSF160964 16 264 8.5E-80 T 01-11-2018 D3790_17135 be93e95d2ce141b7a302cedf94ba0fea 518 Gene3D G3DSA:3.10.650.10 99 271 5.6E-51 T 01-11-2018 D3790_17135 be93e95d2ce141b7a302cedf94ba0fea 518 Gene3D G3DSA:1.10.3720.10 274 518 2.0E-72 T 01-11-2018 IPR035906 MetI-like superfamily D3790_17135 be93e95d2ce141b7a302cedf94ba0fea 518 Gene3D G3DSA:2.40.430.10 119 208 5.6E-51 T 01-11-2018 D3790_17135 be93e95d2ce141b7a302cedf94ba0fea 518 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 101 264 9.3E-62 T 01-11-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain D3790_17135 be93e95d2ce141b7a302cedf94ba0fea 518 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 304 506 6.8E-21 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_18175 05d527bad0276dcc9d1074c1c38f7837 279 Gene3D G3DSA:3.30.980.10 112 275 3.4E-7 T 01-11-2018 D3790_18175 05d527bad0276dcc9d1074c1c38f7837 279 SUPERFAMILY SSF55186 112 259 4.84E-10 T 01-11-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 D3790_18175 05d527bad0276dcc9d1074c1c38f7837 279 Gene3D G3DSA:2.40.30.130 2 80 5.6E-5 T 01-11-2018 D3790_18175 05d527bad0276dcc9d1074c1c38f7837 279 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 242 264 2.2E-4 T 01-11-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 D3790_00030 dbd4b6de6ab0c98aeec3dc68a4647a74 183 TIGRFAM TIGR02548 casB_cse2: CRISPR type I-E/ECOLI-associated protein CasB/Cse2 22 180 6.6E-27 T 01-11-2018 IPR013382 CRISPR-associated protein Cse2 D3790_00030 dbd4b6de6ab0c98aeec3dc68a4647a74 183 Gene3D G3DSA:1.10.520.40 21 183 7.1E-31 T 01-11-2018 IPR038287 Cse2 superfamily D3790_00030 dbd4b6de6ab0c98aeec3dc68a4647a74 183 Pfam PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) 36 179 2.0E-21 T 01-11-2018 IPR013382 CRISPR-associated protein Cse2 D3790_19705 dbd4b6de6ab0c98aeec3dc68a4647a74 183 TIGRFAM TIGR02548 casB_cse2: CRISPR type I-E/ECOLI-associated protein CasB/Cse2 22 180 6.6E-27 T 01-11-2018 IPR013382 CRISPR-associated protein Cse2 D3790_19705 dbd4b6de6ab0c98aeec3dc68a4647a74 183 Gene3D G3DSA:1.10.520.40 21 183 7.1E-31 T 01-11-2018 IPR038287 Cse2 superfamily D3790_19705 dbd4b6de6ab0c98aeec3dc68a4647a74 183 Pfam PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) 36 179 2.0E-21 T 01-11-2018 IPR013382 CRISPR-associated protein Cse2 D3790_13725 ffef3cb42a388a8a80327cfe64896463 335 Gene3D G3DSA:3.40.50.2300 70 308 3.2E-69 T 01-11-2018 D3790_13725 ffef3cb42a388a8a80327cfe64896463 335 SUPERFAMILY SSF47413 6 66 6.88E-15 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_13725 ffef3cb42a388a8a80327cfe64896463 335 SMART SM00354 7 78 2.9E-21 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D3790_13725 ffef3cb42a388a8a80327cfe64896463 335 Gene3D G3DSA:3.40.50.2300 166 294 3.2E-69 T 01-11-2018 D3790_13725 ffef3cb42a388a8a80327cfe64896463 335 Pfam PF13377 Periplasmic binding protein-like domain 174 329 2.7E-29 T 01-11-2018 D3790_13725 ffef3cb42a388a8a80327cfe64896463 335 SUPERFAMILY SSF53822 70 331 2.94E-66 T 01-11-2018 IPR028082 Periplasmic binding protein-like I D3790_13725 ffef3cb42a388a8a80327cfe64896463 335 Gene3D G3DSA:1.10.260.40 6 66 1.2E-20 T 01-11-2018 D3790_13725 ffef3cb42a388a8a80327cfe64896463 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 55 2.5E-13 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D3790_13600 1129cfefa437de5cf3157ade7b6e4d19 100 SUPERFAMILY SSF50182 7 69 3.85E-24 T 01-11-2018 IPR010920 LSM domain superfamily D3790_13600 1129cfefa437de5cf3157ade7b6e4d19 100 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 1.9E-29 T 01-11-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 D3790_13600 1129cfefa437de5cf3157ade7b6e4d19 100 Pfam PF17209 Hfq protein 7 69 4.6E-31 T 01-11-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 D3790_13600 1129cfefa437de5cf3157ade7b6e4d19 100 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.396 T 01-11-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 D3790_13600 1129cfefa437de5cf3157ade7b6e4d19 100 Gene3D G3DSA:2.30.30.100 1 72 1.1E-34 T 01-11-2018 D3790_15085 3bbf598fe66b2ce2e51a01345b5bab20 57 SUPERFAMILY SSF54786 2 57 1.06E-9 T 01-11-2018 D3790_15085 3bbf598fe66b2ce2e51a01345b5bab20 57 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 57 1.3E-9 T 01-11-2018 IPR012933 HicA mRNA interferase family GO:0003729 D3790_15085 3bbf598fe66b2ce2e51a01345b5bab20 57 Gene3D G3DSA:3.30.920.30 1 57 5.6E-5 T 01-11-2018 IPR038570 HicA superfamily D3790_17895 1acf4ae499ec7363c1bde7b4b23cbdca 383 SUPERFAMILY SSF56563 94 380 4.05E-60 T 01-11-2018 D3790_17895 1acf4ae499ec7363c1bde7b4b23cbdca 383 Pfam PF05065 Phage capsid family 102 377 8.9E-60 T 01-11-2018 IPR024455 Phage capsid D3790_17895 1acf4ae499ec7363c1bde7b4b23cbdca 383 Gene3D G3DSA:3.30.2320.10 238 332 1.2E-11 T 01-11-2018 D3790_17895 1acf4ae499ec7363c1bde7b4b23cbdca 383 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 5 378 1.9E-92 T 01-11-2018 IPR024455 Phage capsid D3790_17895 1acf4ae499ec7363c1bde7b4b23cbdca 383 Gene3D G3DSA:3.30.2400.10 158 339 1.2E-11 T 01-11-2018 D3790_13580 1f97687ea36a15021dbb0d7c1be3c826 432 SMART SM00788 4 425 3.3E-297 T 01-11-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D3790_13580 1f97687ea36a15021dbb0d7c1be3c826 432 SUPERFAMILY SSF52540 3 431 1.59E-178 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_13580 1f97687ea36a15021dbb0d7c1be3c826 432 Gene3D G3DSA:3.90.170.10 267 432 9.9E-70 T 01-11-2018 D3790_13580 1f97687ea36a15021dbb0d7c1be3c826 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 01-11-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D3790_13580 1f97687ea36a15021dbb0d7c1be3c826 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 216.388 T 01-11-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D3790_13580 1f97687ea36a15021dbb0d7c1be3c826 432 Gene3D G3DSA:1.10.300.10 102 201 7.8E-107 T 01-11-2018 D3790_13580 1f97687ea36a15021dbb0d7c1be3c826 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 6.1E-179 T 01-11-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D3790_13580 1f97687ea36a15021dbb0d7c1be3c826 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 4.2E-200 T 01-11-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D3790_13580 1f97687ea36a15021dbb0d7c1be3c826 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 01-11-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D3790_13580 1f97687ea36a15021dbb0d7c1be3c826 432 Gene3D G3DSA:3.40.440.10 6 249 7.8E-107 T 01-11-2018 D3790_19585 d2392a4c56a163e472ecf81c5ac21502 84 SUPERFAMILY SSF143120 1 81 2.53E-25 T 01-11-2018 IPR036165 YefM-like superfamily D3790_19585 d2392a4c56a163e472ecf81c5ac21502 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 54 1.2E-10 T 01-11-2018 D3790_19585 d2392a4c56a163e472ecf81c5ac21502 84 Gene3D G3DSA:3.40.1620.10 1 40 6.6E-20 T 01-11-2018 D3790_19585 d2392a4c56a163e472ecf81c5ac21502 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 73 3.2E-22 T 01-11-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM D3790_19585 d2392a4c56a163e472ecf81c5ac21502 84 Gene3D G3DSA:1.10.1220.170 41 84 1.2E-12 T 01-11-2018 D3790_11315 a4a07882bc93aca0591e35f41c90991a 423 Gene3D G3DSA:1.10.8.60 316 423 2.9E-42 T 01-11-2018 D3790_11315 a4a07882bc93aca0591e35f41c90991a 423 Gene3D G3DSA:3.40.50.300 62 315 3.7E-109 T 01-11-2018 D3790_11315 a4a07882bc93aca0591e35f41c90991a 423 SMART SM00994 12 51 1.0E-24 T 01-11-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 D3790_11315 a4a07882bc93aca0591e35f41c90991a 423 Pfam PF06689 ClpX C4-type zinc finger 13 50 1.2E-20 T 01-11-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 D3790_11315 a4a07882bc93aca0591e35f41c90991a 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.567 T 01-11-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 D3790_11315 a4a07882bc93aca0591e35f41c90991a 423 SUPERFAMILY SSF52540 63 404 1.15E-71 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_11315 a4a07882bc93aca0591e35f41c90991a 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 5.0E-215 T 01-11-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 D3790_11315 a4a07882bc93aca0591e35f41c90991a 423 SMART SM01086 317 412 5.8E-35 T 01-11-2018 IPR019489 Clp ATPase, C-terminal D3790_11315 a4a07882bc93aca0591e35f41c90991a 423 Gene3D G3DSA:3.30.50.30 2 52 9.3E-28 T 01-11-2018 IPR038366 Zinc finger, ClpX C4-type superfamily D3790_11315 a4a07882bc93aca0591e35f41c90991a 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 394 1.1E-16 T 01-11-2018 IPR019489 Clp ATPase, C-terminal D3790_11315 a4a07882bc93aca0591e35f41c90991a 423 SUPERFAMILY SSF57716 13 48 5.84E-12 T 01-11-2018 D3790_11315 a4a07882bc93aca0591e35f41c90991a 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 8.1E-49 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D3790_11315 a4a07882bc93aca0591e35f41c90991a 423 SMART SM00382 111 314 1.9E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_18035 30459010302c613f90623ee53841630f 227 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 3 227 35.55 T 01-11-2018 IPR009576 Biofilm formation YgiB D3790_18035 30459010302c613f90623ee53841630f 227 Pfam PF06693 Protein of unknown function (DUF1190) 43 211 1.7E-57 T 01-11-2018 IPR009576 Biofilm formation YgiB D3790_12575 953fc6016ab8f797ad54fbb51c455bc5 129 SUPERFAMILY SSF54427 5 122 2.0E-13 T 01-11-2018 IPR032710 NTF2-like domain superfamily D3790_12575 953fc6016ab8f797ad54fbb51c455bc5 129 Gene3D G3DSA:3.10.450.50 3 128 7.3E-21 T 01-11-2018 D3790_12575 953fc6016ab8f797ad54fbb51c455bc5 129 Pfam PF12680 SnoaL-like domain 7 114 3.2E-6 T 01-11-2018 IPR037401 SnoaL-like domain D3790_16240 bba1fdb25a95cd3de5dd606a45fce37b 238 Gene3D G3DSA:1.20.58.220 1 116 2.6E-39 T 01-11-2018 IPR038078 PhoU-like domain superfamily D3790_16240 bba1fdb25a95cd3de5dd606a45fce37b 238 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 1.3E-71 T 01-11-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 D3790_16240 bba1fdb25a95cd3de5dd606a45fce37b 238 SUPERFAMILY SSF109755 13 231 3.24E-68 T 01-11-2018 D3790_16240 bba1fdb25a95cd3de5dd606a45fce37b 238 Gene3D G3DSA:1.20.58.220 118 238 1.2E-33 T 01-11-2018 IPR038078 PhoU-like domain superfamily D3790_16240 bba1fdb25a95cd3de5dd606a45fce37b 238 Pfam PF01895 PhoU domain 128 212 3.6E-17 T 01-11-2018 IPR026022 PhoU domain D3790_16240 bba1fdb25a95cd3de5dd606a45fce37b 238 Pfam PF01895 PhoU domain 26 111 1.9E-19 T 01-11-2018 IPR026022 PhoU domain D3790_16240 bba1fdb25a95cd3de5dd606a45fce37b 238 PIRSF PIRSF003107 7 226 1.5E-66 T 01-11-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 D3790_13610 697719b9ab065e3d7d4ce2a499112281 640 SUPERFAMILY SSF54211 191 330 1.59E-36 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_13610 697719b9ab065e3d7d4ce2a499112281 640 Gene3D G3DSA:3.30.230.10 217 329 1.0E-40 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3790_13610 697719b9ab065e3d7d4ce2a499112281 640 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 637 25.541 T 01-11-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 D3790_13610 697719b9ab065e3d7d4ce2a499112281 640 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 1.2E-37 T 01-11-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 D3790_13610 697719b9ab065e3d7d4ce2a499112281 640 SMART SM01340 212 330 1.4E-55 T 01-11-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 D3790_13610 697719b9ab065e3d7d4ce2a499112281 640 SUPERFAMILY SSF118116 458 638 1.19E-37 T 01-11-2018 IPR037198 MutL, C-terminal domain superfamily D3790_13610 697719b9ab065e3d7d4ce2a499112281 640 SMART SM00853 463 598 2.4E-12 T 01-11-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 D3790_13610 697719b9ab065e3d7d4ce2a499112281 640 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 01-11-2018 IPR014762 DNA mismatch repair, conserved site D3790_13610 697719b9ab065e3d7d4ce2a499112281 640 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 121 1.2E-12 T 01-11-2018 D3790_13610 697719b9ab065e3d7d4ce2a499112281 640 Pfam PF08676 MutL C terminal dimerisation domain 460 589 1.2E-23 T 01-11-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 D3790_13610 697719b9ab065e3d7d4ce2a499112281 640 Gene3D G3DSA:2.30.42.20 460 634 8.4E-61 T 01-11-2018 D3790_13610 697719b9ab065e3d7d4ce2a499112281 640 Gene3D G3DSA:3.30.565.10 1 216 2.0E-73 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_13610 697719b9ab065e3d7d4ce2a499112281 640 SUPERFAMILY SSF55874 2 208 2.1E-56 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_13610 697719b9ab065e3d7d4ce2a499112281 640 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 3.1E-104 T 01-11-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 D3790_13610 697719b9ab065e3d7d4ce2a499112281 640 Gene3D G3DSA:3.30.1370.100 504 592 8.4E-61 T 01-11-2018 D3790_18105 51f9e90fe97a5d558c3bdf5fe07d3a76 434 Gene3D G3DSA:3.10.50.40 281 387 2.6E-83 T 01-11-2018 D3790_18105 51f9e90fe97a5d558c3bdf5fe07d3a76 434 Gene3D G3DSA:3.10.50.40 176 389 2.6E-83 T 01-11-2018 D3790_18105 51f9e90fe97a5d558c3bdf5fe07d3a76 434 SUPERFAMILY SSF54534 174 277 2.29E-27 T 01-11-2018 D3790_18105 51f9e90fe97a5d558c3bdf5fe07d3a76 434 Pfam PF00639 PPIC-type PPIASE domain 179 273 2.9E-18 T 01-11-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 D3790_18105 51f9e90fe97a5d558c3bdf5fe07d3a76 434 Pfam PF00639 PPIC-type PPIASE domain 290 381 2.3E-25 T 01-11-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 D3790_18105 51f9e90fe97a5d558c3bdf5fe07d3a76 434 Hamap MF_01183 Chaperone SurA [surA]. 8 429 33.515 T 01-11-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 D3790_18105 51f9e90fe97a5d558c3bdf5fe07d3a76 434 Gene3D G3DSA:1.10.4030.10 22 149 3.2E-40 T 01-11-2018 D3790_18105 51f9e90fe97a5d558c3bdf5fe07d3a76 434 SUPERFAMILY SSF54534 284 385 4.45E-31 T 01-11-2018 D3790_18105 51f9e90fe97a5d558c3bdf5fe07d3a76 434 Pfam PF09312 SurA N-terminal domain 26 143 3.9E-40 T 01-11-2018 IPR015391 SurA N-terminal D3790_18105 51f9e90fe97a5d558c3bdf5fe07d3a76 434 SUPERFAMILY SSF109998 26 200 4.32E-39 T 01-11-2018 IPR027304 Trigger factor/SurA domain superfamily D3790_18105 51f9e90fe97a5d558c3bdf5fe07d3a76 434 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 322 343 - T 01-11-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 D3790_11770 c2b45344de046f31ee544eae6336e1c6 266 SUPERFAMILY SSF101386 140 237 1.25E-24 T 01-11-2018 D3790_11770 c2b45344de046f31ee544eae6336e1c6 266 Gene3D G3DSA:1.10.287.1080 134 265 6.9E-49 T 01-11-2018 D3790_11770 c2b45344de046f31ee544eae6336e1c6 266 TIGRFAM TIGR00444 mazG: MazG family protein 15 262 1.5E-103 T 01-11-2018 IPR011551 NTP pyrophosphohydrolase MazG D3790_11770 c2b45344de046f31ee544eae6336e1c6 266 SUPERFAMILY SSF101386 9 107 8.34E-25 T 01-11-2018 D3790_11770 c2b45344de046f31ee544eae6336e1c6 266 Gene3D G3DSA:1.10.287.1080 5 130 4.3E-44 T 01-11-2018 D3790_11770 c2b45344de046f31ee544eae6336e1c6 266 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 235 2.5E-11 T 01-11-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core D3790_11770 c2b45344de046f31ee544eae6336e1c6 266 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 32 105 4.5E-28 T 01-11-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core D3790_01735 98cf81d26611953ba54500630a0f1cb9 675 SUPERFAMILY SSF69279 16 195 2.1E-43 T 01-11-2018 D3790_01735 98cf81d26611953ba54500630a0f1cb9 675 Pfam PF05954 Phage late control gene D protein (GPD) 36 338 2.3E-68 T 01-11-2018 D3790_01735 98cf81d26611953ba54500630a0f1cb9 675 Gene3D G3DSA:3.55.50.10 113 199 7.9E-65 T 01-11-2018 D3790_01735 98cf81d26611953ba54500630a0f1cb9 675 SUPERFAMILY SSF69349 451 619 2.04E-37 T 01-11-2018 D3790_01735 98cf81d26611953ba54500630a0f1cb9 675 Gene3D G3DSA:3.30.1920.30 231 296 7.9E-65 T 01-11-2018 D3790_01735 98cf81d26611953ba54500630a0f1cb9 675 Gene3D G3DSA:2.30.110.50 31 338 7.9E-65 T 01-11-2018 D3790_01735 98cf81d26611953ba54500630a0f1cb9 675 Gene3D G3DSA:2.40.50.230 367 465 7.9E-38 T 01-11-2018 IPR037026 Vgr protein, OB-fold domain superfamily D3790_01735 98cf81d26611953ba54500630a0f1cb9 675 SUPERFAMILY SSF69279 195 374 1.31E-31 T 01-11-2018 D3790_01735 98cf81d26611953ba54500630a0f1cb9 675 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 16 529 1.0E-164 T 01-11-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset D3790_01735 98cf81d26611953ba54500630a0f1cb9 675 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 29 512 2.5E-107 T 01-11-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein D3790_01735 98cf81d26611953ba54500630a0f1cb9 675 SUPERFAMILY SSF69255 373 461 4.97E-29 T 01-11-2018 D3790_15255 4f5b9067e36d8cf6c842adecc834546b 136 Pfam PF05598 Transposase domain (DUF772) 68 123 1.2E-8 T 01-11-2018 IPR008490 Transposase InsH, N-terminal D3790_09390 035d3f127df68e0282790119eccbf828 489 Gene3D G3DSA:3.40.710.10 29 358 2.3E-77 T 01-11-2018 D3790_09390 035d3f127df68e0282790119eccbf828 489 SUPERFAMILY SSF56601 28 353 8.77E-63 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like D3790_09390 035d3f127df68e0282790119eccbf828 489 Pfam PF00144 Beta-lactamase 37 340 9.4E-49 T 01-11-2018 IPR001466 Beta-lactamase-related D3790_05175 1459692eb0a5cb20e2b705d2c99955af 329 SUPERFAMILY SSF52540 1 207 6.57E-46 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05175 1459692eb0a5cb20e2b705d2c99955af 329 SUPERFAMILY SSF48019 209 327 3.06E-33 T 01-11-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 D3790_05175 1459692eb0a5cb20e2b705d2c99955af 329 Gene3D G3DSA:1.20.272.10 209 328 6.1E-39 T 01-11-2018 D3790_05175 1459692eb0a5cb20e2b705d2c99955af 329 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 209 322 8.9E-40 T 01-11-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_05175 1459692eb0a5cb20e2b705d2c99955af 329 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 202 7.2E-56 T 01-11-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_05175 1459692eb0a5cb20e2b705d2c99955af 329 Pfam PF13177 DNA polymerase III, delta subunit 9 161 6.6E-41 T 01-11-2018 D3790_05175 1459692eb0a5cb20e2b705d2c99955af 329 Gene3D G3DSA:3.40.50.300 1 166 1.5E-48 T 01-11-2018 D3790_13095 7b23dbeb27aee2b1aa671f53c9c8e0e7 477 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 475 1.8E-208 T 01-11-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 D3790_13095 7b23dbeb27aee2b1aa671f53c9c8e0e7 477 Pfam PF00171 Aldehyde dehydrogenase family 19 475 1.0E-164 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D3790_13095 7b23dbeb27aee2b1aa671f53c9c8e0e7 477 Gene3D G3DSA:3.40.309.10 261 450 1.2E-177 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D3790_13095 7b23dbeb27aee2b1aa671f53c9c8e0e7 477 SUPERFAMILY SSF53720 8 473 1.2E-164 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D3790_13095 7b23dbeb27aee2b1aa671f53c9c8e0e7 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 D3790_13095 7b23dbeb27aee2b1aa671f53c9c8e0e7 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 D3790_13095 7b23dbeb27aee2b1aa671f53c9c8e0e7 477 Gene3D G3DSA:3.40.605.10 20 473 1.2E-177 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D3790_03410 6a208d5d683853f34d7ed66284211418 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 528 2.6E-60 T 01-11-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D3790_03410 6a208d5d683853f34d7ed66284211418 555 Gene3D G3DSA:3.40.50.620 30 247 7.1E-107 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_03410 6a208d5d683853f34d7ed66284211418 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_03410 6a208d5d683853f34d7ed66284211418 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 3.0E-126 T 01-11-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 D3790_03410 6a208d5d683853f34d7ed66284211418 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.4E-9 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D3790_03410 6a208d5d683853f34d7ed66284211418 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 2.4E-9 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D3790_03410 6a208d5d683853f34d7ed66284211418 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.4E-9 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D3790_03410 6a208d5d683853f34d7ed66284211418 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 2.4E-9 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D3790_03410 6a208d5d683853f34d7ed66284211418 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 549 53.531 T 01-11-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 D3790_03410 6a208d5d683853f34d7ed66284211418 555 Gene3D G3DSA:3.90.800.10 101 209 7.1E-107 T 01-11-2018 D3790_03410 6a208d5d683853f34d7ed66284211418 555 SUPERFAMILY SSF50715 340 547 3.3E-78 T 01-11-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D3790_03410 6a208d5d683853f34d7ed66284211418 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 551 1.8E-301 T 01-11-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D3790_03410 6a208d5d683853f34d7ed66284211418 555 Gene3D G3DSA:2.40.240.10 348 462 1.1E-46 T 01-11-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D3790_03410 6a208d5d683853f34d7ed66284211418 555 Gene3D G3DSA:1.10.1160.10 261 339 1.9E-36 T 01-11-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 D3790_03410 6a208d5d683853f34d7ed66284211418 555 Gene3D G3DSA:2.40.240.10 463 547 6.0E-29 T 01-11-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D3790_03410 6a208d5d683853f34d7ed66284211418 555 SUPERFAMILY SSF52374 10 337 6.19E-103 T 01-11-2018 D3790_19620 12a4a4f666bdc189d964d7d62374f54c 173 Gene3D G3DSA:1.10.10.10 91 166 3.6E-11 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_19620 12a4a4f666bdc189d964d7d62374f54c 173 Gene3D G3DSA:1.10.1740.10 4 78 1.7E-9 T 01-11-2018 D3790_19620 12a4a4f666bdc189d964d7d62374f54c 173 Pfam PF08281 Sigma-70, region 4 112 164 1.2E-15 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D3790_19620 12a4a4f666bdc189d964d7d62374f54c 173 Pfam PF04542 Sigma-70 region 2 16 81 5.2E-13 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D3790_19620 12a4a4f666bdc189d964d7d62374f54c 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 164 5.0E-21 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D3790_19620 12a4a4f666bdc189d964d7d62374f54c 173 SUPERFAMILY SSF88946 13 97 7.85E-15 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D3790_19620 12a4a4f666bdc189d964d7d62374f54c 173 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 38 68 - T 01-11-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D3790_19620 12a4a4f666bdc189d964d7d62374f54c 173 SUPERFAMILY SSF88659 107 164 4.14E-13 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D3790_05640 bea6a936f1f7f347908bfbab29081dd5 368 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 56 341 1.7E-131 T 01-11-2018 IPR006507 Uncharacterised protein family UPF0283 D3790_05640 bea6a936f1f7f347908bfbab29081dd5 368 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 347 38.964 T 01-11-2018 IPR006507 Uncharacterised protein family UPF0283 D3790_05640 bea6a936f1f7f347908bfbab29081dd5 368 Pfam PF05128 Domain of unknown function (DUF697) 182 341 5.7E-55 T 01-11-2018 IPR021147 Protein of unknown function DUF697 D3790_15320 afa9a54730b8bf397d2d24e007a6d3ba 222 Gene3D G3DSA:2.40.33.20 1 222 1.0E-72 T 01-11-2018 D3790_15320 afa9a54730b8bf397d2d24e007a6d3ba 222 Pfam PF03475 3-alpha domain 167 210 1.4E-14 T 01-11-2018 IPR005163 3-alpha domain D3790_15320 afa9a54730b8bf397d2d24e007a6d3ba 222 SUPERFAMILY SSF50800 4 222 2.2E-70 T 01-11-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily D3790_15320 afa9a54730b8bf397d2d24e007a6d3ba 222 Pfam PF03473 MOSC domain 47 158 2.5E-19 T 01-11-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 D3790_09750 b9e3cecc45810d1f73732dec95cb84ac 370 Gene3D G3DSA:3.10.20.30 272 370 8.2E-17 T 01-11-2018 IPR012675 Beta-grasp domain superfamily D3790_09750 b9e3cecc45810d1f73732dec95cb84ac 370 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 323 331 - T 01-11-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 D3790_09750 b9e3cecc45810d1f73732dec95cb84ac 370 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 302 362 5.0E-12 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 D3790_09750 b9e3cecc45810d1f73732dec95cb84ac 370 Pfam PF03476 MOSC N-terminal beta barrel domain 1 116 1.6E-26 T 01-11-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 D3790_09750 b9e3cecc45810d1f73732dec95cb84ac 370 Pfam PF03473 MOSC domain 139 262 6.8E-27 T 01-11-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 D3790_09750 b9e3cecc45810d1f73732dec95cb84ac 370 SUPERFAMILY SSF50800 3 264 2.09E-14 T 01-11-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily D3790_09750 b9e3cecc45810d1f73732dec95cb84ac 370 SUPERFAMILY SSF141673 4 131 6.15E-29 T 01-11-2018 D3790_09750 b9e3cecc45810d1f73732dec95cb84ac 370 SUPERFAMILY SSF54292 289 369 2.23E-20 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D3790_19090 36b026378d27d6595a5c3fccedc346e8 579 SUPERFAMILY SSF56014 432 564 2.75E-32 T 01-11-2018 D3790_19090 36b026378d27d6595a5c3fccedc346e8 579 SUPERFAMILY SSF55124 15 148 5.07E-27 T 01-11-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_19090 36b026378d27d6595a5c3fccedc346e8 579 SUPERFAMILY SSF56014 153 347 6.15E-59 T 01-11-2018 D3790_19090 36b026378d27d6595a5c3fccedc346e8 579 SUPERFAMILY SSF55124 349 426 1.8E-20 T 01-11-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_19090 36b026378d27d6595a5c3fccedc346e8 579 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 437 543 0.26 T 01-11-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_19090 36b026378d27d6595a5c3fccedc346e8 579 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 13 574 57.592 T 01-11-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_19090 36b026378d27d6595a5c3fccedc346e8 579 PRINTS PR00397 Sirohaem Fe-binding site signature 433 451 2.6E-8 T 01-11-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_19090 36b026378d27d6595a5c3fccedc346e8 579 PRINTS PR00397 Sirohaem Fe-binding site signature 481 499 2.6E-8 T 01-11-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_19090 36b026378d27d6595a5c3fccedc346e8 579 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 176 334 3.6E-47 T 01-11-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_19090 36b026378d27d6595a5c3fccedc346e8 579 Gene3D G3DSA:3.30.413.10 144 351 4.4E-88 T 01-11-2018 D3790_19090 36b026378d27d6595a5c3fccedc346e8 579 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 83 142 8.6E-13 T 01-11-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_19090 36b026378d27d6595a5c3fccedc346e8 579 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 358 420 2.2E-13 T 01-11-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_19090 36b026378d27d6595a5c3fccedc346e8 579 Gene3D G3DSA:3.90.480.20 20 410 4.4E-88 T 01-11-2018 D3790_19090 36b026378d27d6595a5c3fccedc346e8 579 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 481 497 - T 01-11-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_19090 36b026378d27d6595a5c3fccedc346e8 579 Gene3D G3DSA:3.30.413.10 429 571 4.2E-34 T 01-11-2018 D3790_19090 36b026378d27d6595a5c3fccedc346e8 579 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 22 562 2.7E-288 T 01-11-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D3790_17530 ab46020706209b78098f59af393d8630 187 Pfam PF08282 haloacid dehalogenase-like hydrolase 94 157 8.1E-10 T 01-11-2018 D3790_17530 ab46020706209b78098f59af393d8630 187 PIRSF PIRSF006118 12 187 2.0E-72 T 01-11-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 D3790_17530 ab46020706209b78098f59af393d8630 187 Gene3D G3DSA:3.40.50.1000 2 187 3.7E-59 T 01-11-2018 IPR023214 HAD superfamily D3790_17530 ab46020706209b78098f59af393d8630 187 SUPERFAMILY SSF56784 22 179 7.63E-41 T 01-11-2018 IPR036412 HAD-like superfamily D3790_17530 ab46020706209b78098f59af393d8630 187 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 26 178 2.2E-70 T 01-11-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 D3790_08420 1bdfa5aebdc685f54acf2299fd54411a 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 1.4E-7 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D3790_08420 1bdfa5aebdc685f54acf2299fd54411a 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 1.4E-7 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D3790_08420 1bdfa5aebdc685f54acf2299fd54411a 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 1.4E-7 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D3790_08420 1bdfa5aebdc685f54acf2299fd54411a 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 191 1.6E-29 T 01-11-2018 D3790_08420 1bdfa5aebdc685f54acf2299fd54411a 221 SUPERFAMILY SSF56784 7 215 7.71E-51 T 01-11-2018 IPR036412 HAD-like superfamily D3790_08420 1bdfa5aebdc685f54acf2299fd54411a 221 Gene3D G3DSA:1.10.150.240 20 87 4.7E-27 T 01-11-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D3790_08420 1bdfa5aebdc685f54acf2299fd54411a 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 9 191 2.0E-13 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D3790_08420 1bdfa5aebdc685f54acf2299fd54411a 221 Gene3D G3DSA:3.40.50.1000 88 221 5.3E-31 T 01-11-2018 IPR023214 HAD superfamily D3790_13660 92e67dbf33ecb8b9a1239f21ef6c6e16 300 Pfam PF03466 LysR substrate binding domain 89 289 6.3E-37 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_13660 92e67dbf33ecb8b9a1239f21ef6c6e16 300 SUPERFAMILY SSF46785 3 110 3.03E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_13660 92e67dbf33ecb8b9a1239f21ef6c6e16 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.5E-15 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_13660 92e67dbf33ecb8b9a1239f21ef6c6e16 300 Gene3D G3DSA:1.10.10.10 4 89 3.2E-22 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_13660 92e67dbf33ecb8b9a1239f21ef6c6e16 300 SUPERFAMILY SSF53850 89 292 3.98E-41 T 01-11-2018 D3790_13660 92e67dbf33ecb8b9a1239f21ef6c6e16 300 Gene3D G3DSA:3.40.190.290 90 292 2.4E-58 T 01-11-2018 D3790_09320 25a1ffb0b0360200cbd2f29d047b2d68 335 SUPERFAMILY SSF103039 50 231 2.09E-19 T 01-11-2018 IPR028976 CheC-like superfamily D3790_09320 25a1ffb0b0360200cbd2f29d047b2d68 335 Pfam PF02154 Flagellar motor switch protein FliM 38 231 4.3E-76 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 D3790_09320 25a1ffb0b0360200cbd2f29d047b2d68 335 Gene3D G3DSA:3.40.1550.10 44 233 3.3E-56 T 01-11-2018 IPR028976 CheC-like superfamily D3790_09320 25a1ffb0b0360200cbd2f29d047b2d68 335 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 321 6.1E-14 T 01-11-2018 IPR001543 Surface presentation of antigen (SpoA) D3790_09320 25a1ffb0b0360200cbd2f29d047b2d68 335 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 321 2.7E-110 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 D3790_09320 25a1ffb0b0360200cbd2f29d047b2d68 335 SUPERFAMILY SSF101801 250 323 1.57E-11 T 01-11-2018 IPR036429 SpoA-like superfamily D3790_09320 25a1ffb0b0360200cbd2f29d047b2d68 335 PIRSF PIRSF002888 2 330 2.5E-96 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 D3790_09320 25a1ffb0b0360200cbd2f29d047b2d68 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 213 231 3.9E-29 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 D3790_09320 25a1ffb0b0360200cbd2f29d047b2d68 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 3.9E-29 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 D3790_09320 25a1ffb0b0360200cbd2f29d047b2d68 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 3.9E-29 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 D3790_09320 25a1ffb0b0360200cbd2f29d047b2d68 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 3.9E-29 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 D3790_13585 f157c65a4e42d8fa26d7da7739855d83 333 SUPERFAMILY SSF117892 56 156 9.02E-16 T 01-11-2018 IPR036013 Band 7/SPFH domain superfamily D3790_13585 f157c65a4e42d8fa26d7da7739855d83 333 SMART SM00244 18 222 4.2E-36 T 01-11-2018 IPR001107 Band 7 domain D3790_13585 f157c65a4e42d8fa26d7da7739855d83 333 SUPERFAMILY SSF117892 192 228 1.7E-7 T 01-11-2018 IPR036013 Band 7/SPFH domain superfamily D3790_13585 f157c65a4e42d8fa26d7da7739855d83 333 PIRSF PIRSF005651 1 331 7.1E-100 T 01-11-2018 IPR010200 HflC GO:0016021|GO:0052547 D3790_13585 f157c65a4e42d8fa26d7da7739855d83 333 TIGRFAM TIGR01932 hflC: HflC protein 1 322 3.8E-126 T 01-11-2018 IPR010200 HflC GO:0016021|GO:0052547 D3790_13585 f157c65a4e42d8fa26d7da7739855d83 333 Pfam PF01145 SPFH domain / Band 7 family 22 237 2.0E-33 T 01-11-2018 IPR001107 Band 7 domain D3790_13585 f157c65a4e42d8fa26d7da7739855d83 333 Gene3D G3DSA:3.30.479.30 53 162 1.3E-11 T 01-11-2018 D3790_18380 6b7c25e77db867b099fce7d6000570a7 133 SUPERFAMILY SSF46785 30 101 1.52E-7 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_18380 6b7c25e77db867b099fce7d6000570a7 133 Gene3D G3DSA:1.10.10.10 37 105 2.7E-5 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_18380 6b7c25e77db867b099fce7d6000570a7 133 Pfam PF01047 MarR family 46 97 6.8E-6 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D3790_06005 49bb84131737b66aea17ac600d60b30c 509 Gene3D G3DSA:2.60.200.20 2 108 1.3E-10 T 01-11-2018 D3790_06005 49bb84131737b66aea17ac600d60b30c 509 Pfam PF00498 FHA domain 28 96 2.3E-7 T 01-11-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 D3790_06005 49bb84131737b66aea17ac600d60b30c 509 SUPERFAMILY SSF49879 17 110 6.12E-14 T 01-11-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 D3790_06005 49bb84131737b66aea17ac600d60b30c 509 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 19 501 9.4E-44 T 01-11-2018 IPR017735 Type VI secretion system, FHA domain-containing protein D3790_19135 625d771a1ae316615ffc87a17bf0ec19 349 Gene3D G3DSA:3.30.2340.10 166 300 2.0E-119 T 01-11-2018 D3790_19135 625d771a1ae316615ffc87a17bf0ec19 349 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 9 340 1.2E-77 T 01-11-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_19135 625d771a1ae316615ffc87a17bf0ec19 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 76 89 - T 01-11-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 D3790_19135 625d771a1ae316615ffc87a17bf0ec19 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 4 341 28.221 T 01-11-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_19135 625d771a1ae316615ffc87a17bf0ec19 349 Gene3D G3DSA:3.30.2350.20 16 336 2.0E-119 T 01-11-2018 D3790_19135 625d771a1ae316615ffc87a17bf0ec19 349 SUPERFAMILY SSF55120 3 339 5.47E-104 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_19135 625d771a1ae316615ffc87a17bf0ec19 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 175 336 6.9E-17 T 01-11-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_19135 625d771a1ae316615ffc87a17bf0ec19 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 4 166 4.6E-42 T 01-11-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_14145 82a66a4738cb3f77fc0514f2ad2820fd 118 Gene3D G3DSA:1.10.8.50 1 71 1.9E-28 T 01-11-2018 D3790_14145 82a66a4738cb3f77fc0514f2ad2820fd 118 Gene3D G3DSA:4.10.910.10 72 118 1.7E-26 T 01-11-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14145 82a66a4738cb3f77fc0514f2ad2820fd 118 PIRSF PIRSF002134 1 118 2.7E-43 T 01-11-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14145 82a66a4738cb3f77fc0514f2ad2820fd 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.819 T 01-11-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14145 82a66a4738cb3f77fc0514f2ad2820fd 118 SUPERFAMILY SSF46946 2 114 6.06E-47 T 01-11-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 D3790_14145 82a66a4738cb3f77fc0514f2ad2820fd 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.1E-34 T 01-11-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14145 82a66a4738cb3f77fc0514f2ad2820fd 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 5.8E-54 T 01-11-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14145 82a66a4738cb3f77fc0514f2ad2820fd 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 01-11-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_15060 d8574dd92ee7f3a574789c45970b7a42 436 SUPERFAMILY SSF48179 212 309 3.88E-30 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D3790_15060 d8574dd92ee7f3a574789c45970b7a42 436 PIRSF PIRSF000124 16 435 1.2E-59 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 D3790_15060 d8574dd92ee7f3a574789c45970b7a42 436 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 17 424 6.6E-133 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 D3790_15060 d8574dd92ee7f3a574789c45970b7a42 436 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 213 303 1.6E-28 T 01-11-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D3790_15060 d8574dd92ee7f3a574789c45970b7a42 436 Gene3D G3DSA:3.40.50.720 2 209 4.7E-55 T 01-11-2018 D3790_15060 d8574dd92ee7f3a574789c45970b7a42 436 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 330 425 5.1E-22 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D3790_15060 d8574dd92ee7f3a574789c45970b7a42 436 SUPERFAMILY SSF52413 317 429 1.2E-28 T 01-11-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 D3790_15060 d8574dd92ee7f3a574789c45970b7a42 436 PIRSF PIRSF500136 6 435 3.5E-141 T 01-11-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 D3790_15060 d8574dd92ee7f3a574789c45970b7a42 436 SUPERFAMILY SSF51735 18 206 4.29E-42 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_15060 d8574dd92ee7f3a574789c45970b7a42 436 SMART SM00984 330 428 1.4E-30 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D3790_15060 d8574dd92ee7f3a574789c45970b7a42 436 Gene3D G3DSA:3.40.50.720 211 435 5.2E-63 T 01-11-2018 D3790_15060 d8574dd92ee7f3a574789c45970b7a42 436 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 17 192 8.9E-45 T 01-11-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D3790_16140 1d477403d8f3479f59eaf7812be9dd6c 469 SMART SM01230 102 379 4.5E-154 T 01-11-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 D3790_16140 1d477403d8f3479f59eaf7812be9dd6c 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 7.8E-32 T 01-11-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 D3790_16140 1d477403d8f3479f59eaf7812be9dd6c 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 1.1E-211 T 01-11-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 D3790_16140 1d477403d8f3479f59eaf7812be9dd6c 469 Gene3D G3DSA:3.30.590.10 105 457 3.6E-148 T 01-11-2018 D3790_16140 1d477403d8f3479f59eaf7812be9dd6c 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 3.6E-136 T 01-11-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 D3790_16140 1d477403d8f3479f59eaf7812be9dd6c 469 Gene3D G3DSA:3.10.20.70 2 104 2.6E-42 T 01-11-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 D3790_16140 1d477403d8f3479f59eaf7812be9dd6c 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 01-11-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 D3790_16140 1d477403d8f3479f59eaf7812be9dd6c 469 SUPERFAMILY SSF54368 3 100 1.07E-37 T 01-11-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 D3790_16140 1d477403d8f3479f59eaf7812be9dd6c 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 01-11-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 D3790_16140 1d477403d8f3479f59eaf7812be9dd6c 469 SUPERFAMILY SSF55931 102 468 3.04E-137 T 01-11-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 D3790_16140 1d477403d8f3479f59eaf7812be9dd6c 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 01-11-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 D3790_05275 e8ce6c048a8076fb6bf0a18807c92dd7 456 SUPERFAMILY SSF48557 4 448 6.91E-106 T 01-11-2018 IPR008948 L-Aspartase-like GO:0003824 D3790_05275 e8ce6c048a8076fb6bf0a18807c92dd7 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 1.5E-16 T 01-11-2018 IPR000362 Fumarate lyase family D3790_05275 e8ce6c048a8076fb6bf0a18807c92dd7 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.5E-16 T 01-11-2018 IPR000362 Fumarate lyase family D3790_05275 e8ce6c048a8076fb6bf0a18807c92dd7 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 1.5E-16 T 01-11-2018 IPR000362 Fumarate lyase family D3790_05275 e8ce6c048a8076fb6bf0a18807c92dd7 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.5E-16 T 01-11-2018 IPR000362 Fumarate lyase family D3790_05275 e8ce6c048a8076fb6bf0a18807c92dd7 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 4.7E-53 T 01-11-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 D3790_05275 e8ce6c048a8076fb6bf0a18807c92dd7 456 Gene3D G3DSA:1.10.40.30 382 445 1.7E-157 T 01-11-2018 D3790_05275 e8ce6c048a8076fb6bf0a18807c92dd7 456 Gene3D G3DSA:1.10.275.10 1 117 7.4E-52 T 01-11-2018 IPR024083 Fumarase/histidase, N-terminal D3790_05275 e8ce6c048a8076fb6bf0a18807c92dd7 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 3.4E-150 T 01-11-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D3790_05275 e8ce6c048a8076fb6bf0a18807c92dd7 456 Pfam PF00206 Lyase 14 312 7.5E-75 T 01-11-2018 IPR022761 Fumarate lyase, N-terminal D3790_05275 e8ce6c048a8076fb6bf0a18807c92dd7 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 01-11-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 D3790_05275 e8ce6c048a8076fb6bf0a18807c92dd7 456 Gene3D G3DSA:1.20.200.10 118 446 1.7E-157 T 01-11-2018 D3790_14905 d8d4985b09ed77026ced4ed45e46fcad 346 Pfam PF13551 Winged helix-turn helix 30 79 2.2E-9 T 01-11-2018 D3790_14905 d8d4985b09ed77026ced4ed45e46fcad 346 SUPERFAMILY SSF53098 207 311 8.09E-7 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_14905 d8d4985b09ed77026ced4ed45e46fcad 346 Pfam PF13358 DDE superfamily endonuclease 177 310 1.5E-26 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_14905 d8d4985b09ed77026ced4ed45e46fcad 346 SUPERFAMILY SSF46689 27 140 5.91E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_14905 d8d4985b09ed77026ced4ed45e46fcad 346 Gene3D G3DSA:3.30.420.470 145 340 3.0E-11 T 01-11-2018 D3790_03370 80bc995fdac0995e5c700a2111ac7400 520 Pfam PF02378 Phosphotransferase system, EIIC 12 324 4.9E-69 T 01-11-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 D3790_03370 80bc995fdac0995e5c700a2111ac7400 520 Gene3D G3DSA:3.30.1360.60 416 498 9.7E-26 T 01-11-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 D3790_03370 80bc995fdac0995e5c700a2111ac7400 520 SUPERFAMILY SSF55604 421 495 3.66E-19 T 01-11-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 D3790_03370 80bc995fdac0995e5c700a2111ac7400 520 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 4 492 4.5E-193 T 01-11-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 D3790_03370 80bc995fdac0995e5c700a2111ac7400 520 Pfam PF00367 phosphotransferase system, EIIB 423 456 1.4E-12 T 01-11-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 D3790_03370 80bc995fdac0995e5c700a2111ac7400 520 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 383 481 2.4E-21 T 01-11-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 D3790_13325 4abb762f7c5764d7739688e0e75e1bc0 294 SUPERFAMILY SSF48452 27 283 1.34E-68 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_13325 4abb762f7c5764d7739688e0e75e1bc0 294 Gene3D G3DSA:1.25.40.10 20 294 4.6E-108 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_13325 4abb762f7c5764d7739688e0e75e1bc0 294 SMART SM00028 62 95 10.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D3790_13325 4abb762f7c5764d7739688e0e75e1bc0 294 SMART SM00028 96 129 3.2E-4 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D3790_13325 4abb762f7c5764d7739688e0e75e1bc0 294 PIRSF PIRSF004654 1 292 5.2E-109 T 01-11-2018 IPR023605 Lipoprotein NlpI D3790_10430 2cff0b8675ae85cd2b67365251808f69 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.4E-40 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_10430 2cff0b8675ae85cd2b67365251808f69 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 3.4E-40 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_10430 2cff0b8675ae85cd2b67365251808f69 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 3.4E-40 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_10430 2cff0b8675ae85cd2b67365251808f69 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 3.4E-40 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_10430 2cff0b8675ae85cd2b67365251808f69 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 3.4E-40 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_10430 2cff0b8675ae85cd2b67365251808f69 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 3.4E-40 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_10430 2cff0b8675ae85cd2b67365251808f69 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 240 5.0E-66 T 01-11-2018 D3790_10430 2cff0b8675ae85cd2b67365251808f69 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.8E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_10430 2cff0b8675ae85cd2b67365251808f69 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.8E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_10430 2cff0b8675ae85cd2b67365251808f69 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.8E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_10430 2cff0b8675ae85cd2b67365251808f69 246 Gene3D G3DSA:3.40.50.720 1 244 4.9E-81 T 01-11-2018 D3790_10430 2cff0b8675ae85cd2b67365251808f69 246 SUPERFAMILY SSF51735 6 242 6.5E-80 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_09010 ac177b845c4dd157b8dcf437b1921870 334 SUPERFAMILY SSF69279 182 321 6.8E-29 T 01-11-2018 D3790_09010 ac177b845c4dd157b8dcf437b1921870 334 Gene3D G3DSA:3.55.50.10 89 176 3.3E-85 T 01-11-2018 D3790_09010 ac177b845c4dd157b8dcf437b1921870 334 Gene3D G3DSA:2.30.300.10 7 283 3.3E-85 T 01-11-2018 D3790_09010 ac177b845c4dd157b8dcf437b1921870 334 SUPERFAMILY SSF69279 1 175 1.08E-53 T 01-11-2018 D3790_09010 ac177b845c4dd157b8dcf437b1921870 334 PIRSF PIRSF004440 1 288 2.4E-69 T 01-11-2018 IPR026276 Baseplate protein GpP D3790_09010 ac177b845c4dd157b8dcf437b1921870 334 PIRSF PIRSF004440 283 332 0.0068 T 01-11-2018 IPR026276 Baseplate protein GpP D3790_09010 ac177b845c4dd157b8dcf437b1921870 334 Pfam PF05954 Phage late control gene D protein (GPD) 27 283 7.2E-12 T 01-11-2018 D3790_09010 ac177b845c4dd157b8dcf437b1921870 334 Gene3D G3DSA:3.30.1920.10 205 279 3.3E-85 T 01-11-2018 IPR023399 Baseplate-like, two-layer sandwich fold D3790_03250 5bc1809f95ee30a2f1f7a79900c95e4e 343 SUPERFAMILY SSF48019 212 336 3.4E-33 T 01-11-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 D3790_03250 5bc1809f95ee30a2f1f7a79900c95e4e 343 SUPERFAMILY SSF52540 1 210 1.06E-53 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_03250 5bc1809f95ee30a2f1f7a79900c95e4e 343 Gene3D G3DSA:3.40.50.300 1 140 4.1E-49 T 01-11-2018 D3790_03250 5bc1809f95ee30a2f1f7a79900c95e4e 343 Pfam PF06144 DNA polymerase III, delta subunit 21 190 5.0E-43 T 01-11-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 D3790_03250 5bc1809f95ee30a2f1f7a79900c95e4e 343 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 337 1.2E-57 T 01-11-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_03250 5bc1809f95ee30a2f1f7a79900c95e4e 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 332 3.7E-98 T 01-11-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 D3790_03250 5bc1809f95ee30a2f1f7a79900c95e4e 343 Gene3D G3DSA:1.10.8.60 143 213 4.1E-25 T 01-11-2018 D3790_03250 5bc1809f95ee30a2f1f7a79900c95e4e 343 Gene3D G3DSA:1.20.272.10 214 343 6.9E-45 T 01-11-2018 D3790_05765 a3408ce0db9c37a13dce7aa6465d6235 420 Gene3D G3DSA:1.10.443.10 213 394 4.9E-10 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_05765 a3408ce0db9c37a13dce7aa6465d6235 420 SUPERFAMILY SSF56349 98 391 2.24E-45 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_05765 a3408ce0db9c37a13dce7aa6465d6235 420 Gene3D G3DSA:1.10.150.130 90 204 4.0E-30 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal D3790_05765 a3408ce0db9c37a13dce7aa6465d6235 420 Pfam PF13356 Arm DNA-binding domain 3 88 6.3E-19 T 01-11-2018 IPR025166 Integrase, DNA-binding domain D3790_05765 a3408ce0db9c37a13dce7aa6465d6235 420 Gene3D G3DSA:3.30.160.390 1 89 8.7E-30 T 01-11-2018 IPR038488 Integrase, DNA-binding domain superfamily D3790_05765 a3408ce0db9c37a13dce7aa6465d6235 420 Pfam PF00589 Phage integrase family 224 385 2.3E-15 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D3790_11045 59bab69aeee536a83104229f852c5b8e 247 Pfam PF02976 DNA mismatch repair enzyme MutH 76 174 7.3E-32 T 01-11-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 D3790_11045 59bab69aeee536a83104229f852c5b8e 247 SMART SM00927 76 174 6.9E-61 T 01-11-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 D3790_11045 59bab69aeee536a83104229f852c5b8e 247 Gene3D G3DSA:3.40.600.10 24 246 9.7E-53 T 01-11-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 D3790_11045 59bab69aeee536a83104229f852c5b8e 247 SUPERFAMILY SSF52980 25 245 2.68E-81 T 01-11-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 D3790_11045 59bab69aeee536a83104229f852c5b8e 247 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 247 148.06 T 01-11-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 D3790_11045 59bab69aeee536a83104229f852c5b8e 247 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 27 243 3.0E-107 T 01-11-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 D3790_04365 4ececda28a532570b7581c996d70a8c4 146 Pfam PF03692 Putative zinc- or iron-chelating domain 15 107 5.9E-10 T 01-11-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein D3790_11380 e1a60a047d4dd83785d512ad829e299b 112 PIRSF PIRSF039144 1 112 8.1E-52 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D3790_11380 e1a60a047d4dd83785d512ad829e299b 112 PRINTS PR00340 P-II protein signature 23 41 1.3E-38 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D3790_11380 e1a60a047d4dd83785d512ad829e299b 112 PRINTS PR00340 P-II protein signature 83 103 1.3E-38 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D3790_11380 e1a60a047d4dd83785d512ad829e299b 112 PRINTS PR00340 P-II protein signature 2 17 1.3E-38 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D3790_11380 e1a60a047d4dd83785d512ad829e299b 112 PRINTS PR00340 P-II protein signature 52 75 1.3E-38 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D3790_11380 e1a60a047d4dd83785d512ad829e299b 112 SMART SM00938 4 105 3.9E-61 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D3790_11380 e1a60a047d4dd83785d512ad829e299b 112 SUPERFAMILY SSF54913 1 112 2.99E-42 T 01-11-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta D3790_11380 e1a60a047d4dd83785d512ad829e299b 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 01-11-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 D3790_11380 e1a60a047d4dd83785d512ad829e299b 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 01-11-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 D3790_11380 e1a60a047d4dd83785d512ad829e299b 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.5E-40 T 01-11-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D3790_11380 e1a60a047d4dd83785d512ad829e299b 112 Gene3D G3DSA:3.30.70.120 1 112 1.7E-44 T 01-11-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal D3790_17150 1dc6a8738fb98ed649e549716e20b92f 816 PIRSF PIRSF000460 3 816 6.2E-202 T 01-11-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 D3790_17150 1dc6a8738fb98ed649e549716e20b92f 816 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 22 814 0.0 T 01-11-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 D3790_17150 1dc6a8738fb98ed649e549716e20b92f 816 Pfam PF00343 Carbohydrate phosphorylase 109 814 1.7E-302 T 01-11-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 D3790_17150 1dc6a8738fb98ed649e549716e20b92f 816 Gene3D G3DSA:3.40.50.2000 473 800 0.0 T 01-11-2018 D3790_17150 1dc6a8738fb98ed649e549716e20b92f 816 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 659 671 - T 01-11-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 D3790_17150 1dc6a8738fb98ed649e549716e20b92f 816 SUPERFAMILY SSF53756 19 815 1.41E-288 T 01-11-2018 D3790_17150 1dc6a8738fb98ed649e549716e20b92f 816 Gene3D G3DSA:3.40.50.2000 77 814 0.0 T 01-11-2018 D3790_16010 885817f5a7b9f5a3fb975d6239379269 184 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 20 175 6.7E-39 T 01-11-2018 IPR017734 Type VI secretion system, lipoprotein SciN D3790_16010 885817f5a7b9f5a3fb975d6239379269 184 Gene3D G3DSA:2.60.40.4150 47 182 1.0E-32 T 01-11-2018 IPR038706 Type VI secretion protein SciN-like superfamily D3790_16010 885817f5a7b9f5a3fb975d6239379269 184 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 14 177 1.8E-42 T 01-11-2018 IPR017734 Type VI secretion system, lipoprotein SciN D3790_08685 8d04ed6d3217a190a4db3f38f85a41ae 88 SUPERFAMILY SSF47413 3 73 1.04E-31 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_08685 8d04ed6d3217a190a4db3f38f85a41ae 88 Gene3D G3DSA:1.10.260.40 1 72 7.2E-34 T 01-11-2018 D3790_08685 8d04ed6d3217a190a4db3f38f85a41ae 88 Pfam PF13693 Winged helix-turn-helix DNA-binding 8 81 1.2E-38 T 01-11-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain D3790_10645 7eaa39c1d2c9124d775939a8ab45c8e5 201 Gene3D G3DSA:1.10.3210.10 11 201 1.1E-51 T 01-11-2018 D3790_10645 7eaa39c1d2c9124d775939a8ab45c8e5 201 SUPERFAMILY SSF109604 14 191 4.71E-45 T 01-11-2018 D3790_10645 7eaa39c1d2c9124d775939a8ab45c8e5 201 Pfam PF13023 HD domain 24 184 1.3E-50 T 01-11-2018 IPR006674 HD domain D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 Gene3D G3DSA:3.20.20.80 344 831 4.4E-162 T 01-11-2018 D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 SUPERFAMILY SSF49384 37 207 3.77E-59 T 01-11-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 346 777 3.3E-112 T 01-11-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 224 343 1.6E-15 T 01-11-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 SUPERFAMILY SSF81296 795 896 5.18E-35 T 01-11-2018 IPR014756 Immunoglobulin E-set D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 PRINTS PR00738 Glycosyl hydrolase family 20 signature 513 531 8.3E-46 T 01-11-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 PRINTS PR00738 Glycosyl hydrolase family 20 signature 340 357 8.3E-46 T 01-11-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 PRINTS PR00738 Glycosyl hydrolase family 20 signature 540 553 8.3E-46 T 01-11-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 PRINTS PR00738 Glycosyl hydrolase family 20 signature 369 390 8.3E-46 T 01-11-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 PRINTS PR00738 Glycosyl hydrolase family 20 signature 306 326 8.3E-46 T 01-11-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 PRINTS PR00738 Glycosyl hydrolase family 20 signature 759 776 8.3E-46 T 01-11-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 PRINTS PR00738 Glycosyl hydrolase family 20 signature 741 757 8.3E-46 T 01-11-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 PRINTS PR00738 Glycosyl hydrolase family 20 signature 446 463 8.3E-46 T 01-11-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 SMART SM01081 44 205 1.3E-82 T 01-11-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 Gene3D G3DSA:3.30.379.10 218 343 2.5E-26 T 01-11-2018 IPR029018 Beta-hexosaminidase-like, domain 2 D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 818 894 4.7E-28 T 01-11-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 Pfam PF03173 Putative carbohydrate binding domain 45 204 3.2E-62 T 01-11-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 SUPERFAMILY SSF55545 219 345 7.98E-26 T 01-11-2018 IPR029018 Beta-hexosaminidase-like, domain 2 D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 Gene3D G3DSA:2.60.40.10 832 897 7.1E-24 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 SUPERFAMILY SSF51445 346 785 3.51E-136 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily D3790_03405 39afe8db7cb4281d85522c8b65172f59 899 Gene3D G3DSA:2.60.40.290 36 177 2.9E-52 T 01-11-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 D3790_12770 589a0000f535e320bf0bb586deb2c52e 196 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 125 131 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D3790_12770 589a0000f535e320bf0bb586deb2c52e 196 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 190 5.8E-67 T 01-11-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 D3790_12770 589a0000f535e320bf0bb586deb2c52e 196 Gene3D G3DSA:3.40.50.150 1 195 1.1E-65 T 01-11-2018 D3790_12770 589a0000f535e320bf0bb586deb2c52e 196 Pfam PF03602 Conserved hypothetical protein 95 13 188 4.7E-64 T 01-11-2018 D3790_12770 589a0000f535e320bf0bb586deb2c52e 196 SUPERFAMILY SSF53335 12 190 5.72E-55 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_12770 589a0000f535e320bf0bb586deb2c52e 196 PIRSF PIRSF004553 12 192 1.8E-58 T 01-11-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 D3790_00985 0276954384edc10befb111d868bb54e7 339 SUPERFAMILY SSF51735 1 177 1.16E-52 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_00985 0276954384edc10befb111d868bb54e7 339 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 3.1E-176 T 01-11-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 D3790_00985 0276954384edc10befb111d868bb54e7 339 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 1.5E-33 T 01-11-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00985 0276954384edc10befb111d868bb54e7 339 Gene3D G3DSA:3.30.360.10 154 318 1.5E-127 T 01-11-2018 D3790_00985 0276954384edc10befb111d868bb54e7 339 Gene3D G3DSA:3.40.50.720 4 328 1.5E-127 T 01-11-2018 D3790_00985 0276954384edc10befb111d868bb54e7 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 3.1E-30 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00985 0276954384edc10befb111d868bb54e7 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 3.1E-30 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00985 0276954384edc10befb111d868bb54e7 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 3.1E-30 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00985 0276954384edc10befb111d868bb54e7 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 3.1E-30 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00985 0276954384edc10befb111d868bb54e7 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 3.1E-30 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00985 0276954384edc10befb111d868bb54e7 339 PIRSF PIRSF000149 1 337 8.8E-130 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00985 0276954384edc10befb111d868bb54e7 339 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 9.3E-54 T 01-11-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00985 0276954384edc10befb111d868bb54e7 339 SMART SM00846 3 155 7.2E-77 T 01-11-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_00985 0276954384edc10befb111d868bb54e7 339 SUPERFAMILY SSF55347 155 317 1.34E-56 T 01-11-2018 D3790_00985 0276954384edc10befb111d868bb54e7 339 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 64.134 T 01-11-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 D3790_00985 0276954384edc10befb111d868bb54e7 339 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 01-11-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_15975 f043cfa463e63ff8cbb74757f4b6900a 172 Pfam PF05638 Type VI secretion system effector, Hcp 9 155 3.2E-32 T 01-11-2018 IPR008514 Type VI secretion system effector, Hcp D3790_15975 f043cfa463e63ff8cbb74757f4b6900a 172 SUPERFAMILY SSF141452 3 169 7.32E-40 T 01-11-2018 IPR036624 Hcp1-like superfamily D3790_15975 f043cfa463e63ff8cbb74757f4b6900a 172 Gene3D G3DSA:2.30.110.20 2 172 1.0E-66 T 01-11-2018 IPR036624 Hcp1-like superfamily D3790_15975 f043cfa463e63ff8cbb74757f4b6900a 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 3.8E-64 T 01-11-2018 IPR008514 Type VI secretion system effector, Hcp D3790_06445 1be749bb35627c9ca9be350ec7681a31 307 Pfam PF00849 RNA pseudouridylate synthase 72 202 6.3E-15 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_06445 1be749bb35627c9ca9be350ec7681a31 307 Pfam PF01479 S4 domain 7 46 2.8E-9 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_06445 1be749bb35627c9ca9be350ec7681a31 307 SMART SM00363 6 77 1.0E-6 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_06445 1be749bb35627c9ca9be350ec7681a31 307 Gene3D G3DSA:3.10.290.10 2 64 2.1E-19 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D3790_06445 1be749bb35627c9ca9be350ec7681a31 307 Gene3D G3DSA:3.30.70.1560 134 224 7.6E-52 T 01-11-2018 D3790_06445 1be749bb35627c9ca9be350ec7681a31 307 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 76 235 5.3E-62 T 01-11-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 D3790_06445 1be749bb35627c9ca9be350ec7681a31 307 SUPERFAMILY SSF55120 72 236 1.33E-42 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_06445 1be749bb35627c9ca9be350ec7681a31 307 SUPERFAMILY SSF55174 8 102 1.06E-10 T 01-11-2018 D3790_06445 1be749bb35627c9ca9be350ec7681a31 307 Gene3D G3DSA:3.30.70.580 74 232 7.6E-52 T 01-11-2018 D3790_06445 1be749bb35627c9ca9be350ec7681a31 307 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 110 124 - T 01-11-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 D3790_17335 bcbfccbe25f9a3a232b296b917f3f43a 83 SUPERFAMILY SSF47413 6 72 4.35E-17 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_17335 bcbfccbe25f9a3a232b296b917f3f43a 83 Gene3D G3DSA:1.10.260.40 1 83 3.3E-17 T 01-11-2018 D3790_17335 bcbfccbe25f9a3a232b296b917f3f43a 83 Pfam PF01381 Helix-turn-helix 13 65 9.2E-12 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_17335 bcbfccbe25f9a3a232b296b917f3f43a 83 SMART SM00530 12 67 2.3E-8 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_16460 51df235253424bbabd8aa0a26f254810 338 Pfam PF00005 ABC transporter 42 193 4.3E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_16460 51df235253424bbabd8aa0a26f254810 338 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_16460 51df235253424bbabd8aa0a26f254810 338 Gene3D G3DSA:3.40.50.300 14 336 2.3E-92 T 01-11-2018 D3790_16460 51df235253424bbabd8aa0a26f254810 338 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 244 328 2.1E-23 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 D3790_16460 51df235253424bbabd8aa0a26f254810 338 SUPERFAMILY SSF52540 16 265 6.17E-70 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16460 51df235253424bbabd8aa0a26f254810 338 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 245 310 3.2E-18 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 D3790_16460 51df235253424bbabd8aa0a26f254810 338 SMART SM00382 51 243 5.5E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_08485 d65e6001e6559be285a13b90aafaa866 332 Pfam PF05425 Copper resistance protein D 227 325 3.2E-15 T 01-11-2018 IPR008457 Copper resistance protein D GO:0016021 D3790_02260 e65788325ceb7c46a8bd141d01e7bfbc 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 1.1E-51 T 01-11-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 D3790_02260 e65788325ceb7c46a8bd141d01e7bfbc 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.154 T 01-11-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 D3790_02260 e65788325ceb7c46a8bd141d01e7bfbc 126 Gene3D G3DSA:3.90.470.20 1 126 6.9E-39 T 01-11-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 D3790_02260 e65788325ceb7c46a8bd141d01e7bfbc 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 121 7.6E-24 T 01-11-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 D3790_02260 e65788325ceb7c46a8bd141d01e7bfbc 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 6.7E-36 T 01-11-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 D3790_02260 e65788325ceb7c46a8bd141d01e7bfbc 126 SUPERFAMILY SSF56214 3 125 9.29E-30 T 01-11-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 D3790_02260 e65788325ceb7c46a8bd141d01e7bfbc 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 93 6.0E-36 T 01-11-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 D3790_07870 495bbdd35f89bfd5d8153af8d5702126 208 Gene3D G3DSA:2.60.40.1720 95 204 5.5E-10 T 01-11-2018 IPR038423 Calcium-dependent cell adhesion molecule, C-terminal domain superfamily D3790_07870 495bbdd35f89bfd5d8153af8d5702126 208 Pfam PF08964 Beta/Gamma crystallin 7 92 6.7E-32 T 01-11-2018 IPR015059 Calcium-dependent cell adhesion molecule, N-terminal GO:0016020|GO:0098609 D3790_07870 495bbdd35f89bfd5d8153af8d5702126 208 Pfam PF14564 Membrane binding 98 201 3.6E-25 T 01-11-2018 IPR029283 Calcium-dependent cell adhesion molecule 1, membrane-binding domain D3790_07870 495bbdd35f89bfd5d8153af8d5702126 208 Gene3D G3DSA:2.60.20.10 6 92 3.8E-17 T 01-11-2018 D3790_07070 788370d0391b1655ae0b63a5d1cf5f70 338 SUPERFAMILY SSF56349 153 337 1.06E-46 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_07070 788370d0391b1655ae0b63a5d1cf5f70 338 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 58 119 1.8E-5 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 D3790_07070 788370d0391b1655ae0b63a5d1cf5f70 338 Gene3D G3DSA:1.10.443.10 147 337 2.7E-42 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_07070 788370d0391b1655ae0b63a5d1cf5f70 338 Pfam PF00589 Phage integrase family 155 323 2.9E-30 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D3790_07070 788370d0391b1655ae0b63a5d1cf5f70 338 Gene3D G3DSA:1.10.150.130 49 135 9.8E-6 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal D3790_11125 35c010ee0812a457cf5687359cddf9ba 384 SUPERFAMILY SSF55973 233 382 8.24E-72 T 01-11-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D3790_11125 35c010ee0812a457cf5687359cddf9ba 384 SUPERFAMILY SSF55973 112 232 3.1E-51 T 01-11-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D3790_11125 35c010ee0812a457cf5687359cddf9ba 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.873 T 01-11-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D3790_11125 35c010ee0812a457cf5687359cddf9ba 384 Gene3D G3DSA:3.30.300.10 103 372 2.5E-181 T 01-11-2018 D3790_11125 35c010ee0812a457cf5687359cddf9ba 384 Gene3D G3DSA:3.30.300.10 5 233 2.5E-181 T 01-11-2018 D3790_11125 35c010ee0812a457cf5687359cddf9ba 384 SUPERFAMILY SSF55973 3 109 5.49E-48 T 01-11-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D3790_11125 35c010ee0812a457cf5687359cddf9ba 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 9.8E-200 T 01-11-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D3790_11125 35c010ee0812a457cf5687359cddf9ba 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 2.3E-45 T 01-11-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D3790_11125 35c010ee0812a457cf5687359cddf9ba 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 01-11-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D3790_11125 35c010ee0812a457cf5687359cddf9ba 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 1.4E-43 T 01-11-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D3790_11125 35c010ee0812a457cf5687359cddf9ba 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 01-11-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D3790_11125 35c010ee0812a457cf5687359cddf9ba 384 PIRSF PIRSF000497 1 382 1.1E-175 T 01-11-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D3790_11125 35c010ee0812a457cf5687359cddf9ba 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 5.8E-70 T 01-11-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D3790_11125 35c010ee0812a457cf5687359cddf9ba 384 Gene3D G3DSA:3.30.300.10 11 270 2.5E-181 T 01-11-2018 D3790_18220 4c65b34ffc7d1695d6aa13ef7e836488 1238 Gene3D G3DSA:3.40.50.300 478 883 1.1E-165 T 01-11-2018 D3790_18220 4c65b34ffc7d1695d6aa13ef7e836488 1238 Gene3D G3DSA:1.10.486.10 616 761 1.1E-165 T 01-11-2018 D3790_18220 4c65b34ffc7d1695d6aa13ef7e836488 1238 SUPERFAMILY SSF52980 936 1230 1.5E-88 T 01-11-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 D3790_18220 4c65b34ffc7d1695d6aa13ef7e836488 1238 Gene3D G3DSA:3.90.320.10 926 1237 3.4E-108 T 01-11-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal D3790_18220 4c65b34ffc7d1695d6aa13ef7e836488 1238 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 18 1230 22.656 T 01-11-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 D3790_18220 4c65b34ffc7d1695d6aa13ef7e836488 1238 SUPERFAMILY SSF52540 28 856 8.21E-105 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_18220 4c65b34ffc7d1695d6aa13ef7e836488 1238 Pfam PF13361 UvrD-like helicase C-terminal domain 715 845 9.6E-11 T 01-11-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 D3790_18220 4c65b34ffc7d1695d6aa13ef7e836488 1238 Pfam PF13361 UvrD-like helicase C-terminal domain 474 664 4.7E-9 T 01-11-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 D3790_18220 4c65b34ffc7d1695d6aa13ef7e836488 1238 Pfam PF00580 UvrD/REP helicase N-terminal domain 22 469 4.5E-58 T 01-11-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 D3790_18220 4c65b34ffc7d1695d6aa13ef7e836488 1238 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 20 1229 0.0 T 01-11-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 D3790_18220 4c65b34ffc7d1695d6aa13ef7e836488 1238 Gene3D G3DSA:1.10.3170.10 169 362 4.4E-160 T 01-11-2018 D3790_18220 4c65b34ffc7d1695d6aa13ef7e836488 1238 Gene3D G3DSA:3.40.50.300 20 469 4.4E-160 T 01-11-2018 D3790_18220 4c65b34ffc7d1695d6aa13ef7e836488 1238 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1007 1211 3.5E-7 T 01-11-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type D3790_19715 d776b5c4863c56242fd8f174839cccbf 916 Pfam PF04851 Type III restriction enzyme, res subunit 308 469 3.6E-5 T 01-11-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 D3790_19715 d776b5c4863c56242fd8f174839cccbf 916 Gene3D G3DSA:3.40.50.300 530 691 2.0E-7 T 01-11-2018 D3790_19715 d776b5c4863c56242fd8f174839cccbf 916 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 310 684 3.1E-59 T 01-11-2018 IPR006474 Helicase Cas3, CRISPR-associated, core D3790_19715 d776b5c4863c56242fd8f174839cccbf 916 SMART SM00487 287 521 7.9E-5 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_19715 d776b5c4863c56242fd8f174839cccbf 916 Gene3D G3DSA:1.10.3210.30 6 269 1.9E-48 T 01-11-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily D3790_19715 d776b5c4863c56242fd8f174839cccbf 916 SUPERFAMILY SSF52540 307 686 8.5E-23 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_19715 d776b5c4863c56242fd8f174839cccbf 916 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 31 237 1.7E-28 T 01-11-2018 IPR006483 CRISPR-associated Cas3-type HD domain D3790_16395 6ff2f95915f06e8f715d682bc298711c 282 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 276 43.862 T 01-11-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 D3790_16395 6ff2f95915f06e8f715d682bc298711c 282 SUPERFAMILY SSF144091 97 277 8.37E-38 T 01-11-2018 D3790_16395 6ff2f95915f06e8f715d682bc298711c 282 Gene3D G3DSA:1.20.1540.10 94 272 2.3E-53 T 01-11-2018 IPR035952 Rhomboid-like superfamily D3790_16395 6ff2f95915f06e8f715d682bc298711c 282 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 85 2.5E-25 T 01-11-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 D3790_16395 6ff2f95915f06e8f715d682bc298711c 282 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 271 1.3E-107 T 01-11-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 D3790_16395 6ff2f95915f06e8f715d682bc298711c 282 Gene3D G3DSA:3.30.70.2350 1 70 8.5E-22 T 01-11-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily D3790_16395 6ff2f95915f06e8f715d682bc298711c 282 Pfam PF01694 Rhomboid family 132 270 2.5E-27 T 01-11-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 D3790_18400 d2844a73f011325b6546a478460091c2 241 Pfam PF00318 Ribosomal protein S2 9 224 4.4E-93 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_18400 d2844a73f011325b6546a478460091c2 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 01-11-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 D3790_18400 d2844a73f011325b6546a478460091c2 241 Gene3D G3DSA:1.10.287.610 103 150 8.9E-93 T 01-11-2018 D3790_18400 d2844a73f011325b6546a478460091c2 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.332 T 01-11-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_18400 d2844a73f011325b6546a478460091c2 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 01-11-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 D3790_18400 d2844a73f011325b6546a478460091c2 241 SUPERFAMILY SSF52313 6 235 2.22E-95 T 01-11-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily D3790_18400 d2844a73f011325b6546a478460091c2 241 Gene3D G3DSA:3.40.50.10490 8 219 8.9E-93 T 01-11-2018 D3790_18400 d2844a73f011325b6546a478460091c2 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 8.5E-108 T 01-11-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_18400 d2844a73f011325b6546a478460091c2 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 5.0E-38 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_18400 d2844a73f011325b6546a478460091c2 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 5.0E-38 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_18400 d2844a73f011325b6546a478460091c2 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 5.0E-38 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_18400 d2844a73f011325b6546a478460091c2 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 5.0E-38 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_18400 d2844a73f011325b6546a478460091c2 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 5.0E-38 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_18400 d2844a73f011325b6546a478460091c2 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 5.0E-38 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_13335 d53a8eb4343229d61e29650941e2b539 89 SMART SM01387 8 88 8.9E-48 T 01-11-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_13335 d53a8eb4343229d61e29650941e2b539 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 4.2E-37 T 01-11-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13335 d53a8eb4343229d61e29650941e2b539 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.508 T 01-11-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13335 d53a8eb4343229d61e29650941e2b539 89 Pfam PF00312 Ribosomal protein S15 8 88 5.2E-35 T 01-11-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_13335 d53a8eb4343229d61e29650941e2b539 89 SUPERFAMILY SSF47060 3 89 1.82E-32 T 01-11-2018 IPR009068 S15/NS1, RNA-binding D3790_13335 d53a8eb4343229d61e29650941e2b539 89 Gene3D G3DSA:1.10.287.10 2 89 1.9E-34 T 01-11-2018 D3790_13335 d53a8eb4343229d61e29650941e2b539 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 1.0E-32 T 01-11-2018 D3790_13335 d53a8eb4343229d61e29650941e2b539 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 01-11-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_01005 f787d10a05ffe6d27e6d880707473932 342 Gene3D G3DSA:3.10.520.20 22 342 1.0E-113 T 01-11-2018 D3790_01005 f787d10a05ffe6d27e6d880707473932 342 PIRSF PIRSF006268 2 341 2.2E-92 T 01-11-2018 IPR024932 Flavin transferase ApbE GO:0017013 D3790_01005 f787d10a05ffe6d27e6d880707473932 342 SUPERFAMILY SSF143631 29 339 4.71E-101 T 01-11-2018 IPR003374 ApbE-like superfamily D3790_01005 f787d10a05ffe6d27e6d880707473932 342 Pfam PF02424 ApbE family 35 316 1.2E-83 T 01-11-2018 IPR024932 Flavin transferase ApbE GO:0017013 D3790_00750 2eaa8a6f4177f9fb4a599304567fbe97 252 Pfam PF14348 Domain of unknown function (DUF4400) 54 249 2.6E-74 T 01-11-2018 IPR022266 Integrating conjugative element protein, PFL4697-type D3790_00750 2eaa8a6f4177f9fb4a599304567fbe97 252 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 17 252 2.7E-96 T 01-11-2018 IPR022266 Integrating conjugative element protein, PFL4697-type D3790_11805 6cb15b51da3c1e4d99dbf29d50e5b06f 425 SUPERFAMILY SSF118215 14 407 9.81E-118 T 01-11-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 D3790_11805 6cb15b51da3c1e4d99dbf29d50e5b06f 425 Pfam PF00375 Sodium:dicarboxylate symporter family 14 406 3.0E-108 T 01-11-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 D3790_11805 6cb15b51da3c1e4d99dbf29d50e5b06f 425 Gene3D G3DSA:1.10.3860.10 1 424 6.6E-121 T 01-11-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 D3790_11805 6cb15b51da3c1e4d99dbf29d50e5b06f 425 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 41 56 - T 01-11-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site D3790_11805 6cb15b51da3c1e4d99dbf29d50e5b06f 425 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 300 323 - T 01-11-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site D3790_11805 6cb15b51da3c1e4d99dbf29d50e5b06f 425 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 7 425 36.396 T 01-11-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 D3790_11805 6cb15b51da3c1e4d99dbf29d50e5b06f 425 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 3.3E-30 T 01-11-2018 D3790_11805 6cb15b51da3c1e4d99dbf29d50e5b06f 425 PRINTS PR00173 Glutamate-aspartate symporter signature 150 172 3.3E-30 T 01-11-2018 D3790_11805 6cb15b51da3c1e4d99dbf29d50e5b06f 425 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 3.3E-30 T 01-11-2018 D3790_11805 6cb15b51da3c1e4d99dbf29d50e5b06f 425 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 3.3E-30 T 01-11-2018 D3790_11805 6cb15b51da3c1e4d99dbf29d50e5b06f 425 PRINTS PR00173 Glutamate-aspartate symporter signature 49 69 3.3E-30 T 01-11-2018 D3790_11805 6cb15b51da3c1e4d99dbf29d50e5b06f 425 PRINTS PR00173 Glutamate-aspartate symporter signature 79 104 3.3E-30 T 01-11-2018 D3790_14155 a2a41cf170059b13ccfa5c60adbd663e 443 Gene3D G3DSA:1.10.3370.10 13 429 2.0E-163 T 01-11-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D3790_14155 a2a41cf170059b13ccfa5c60adbd663e 443 Pfam PF00344 SecY translocase 76 417 8.2E-119 T 01-11-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D3790_14155 a2a41cf170059b13ccfa5c60adbd663e 443 PIRSF PIRSF004557 11 441 3.0E-123 T 01-11-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D3790_14155 a2a41cf170059b13ccfa5c60adbd663e 443 SUPERFAMILY SSF103491 16 424 1.44E-133 T 01-11-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D3790_14155 a2a41cf170059b13ccfa5c60adbd663e 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 01-11-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D3790_14155 a2a41cf170059b13ccfa5c60adbd663e 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 01-11-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D3790_14155 a2a41cf170059b13ccfa5c60adbd663e 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 29.874 T 01-11-2018 IPR026593 Protein translocase subunit SecY D3790_14155 a2a41cf170059b13ccfa5c60adbd663e 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 2.1E-98 T 01-11-2018 D3790_14155 a2a41cf170059b13ccfa5c60adbd663e 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 2.1E-98 T 01-11-2018 D3790_14155 a2a41cf170059b13ccfa5c60adbd663e 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 2.1E-98 T 01-11-2018 D3790_14155 a2a41cf170059b13ccfa5c60adbd663e 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 2.1E-98 T 01-11-2018 D3790_14155 a2a41cf170059b13ccfa5c60adbd663e 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 2.1E-98 T 01-11-2018 D3790_14155 a2a41cf170059b13ccfa5c60adbd663e 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 2.1E-98 T 01-11-2018 D3790_14155 a2a41cf170059b13ccfa5c60adbd663e 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 2.1E-98 T 01-11-2018 D3790_14155 a2a41cf170059b13ccfa5c60adbd663e 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 2.1E-98 T 01-11-2018 D3790_14155 a2a41cf170059b13ccfa5c60adbd663e 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 2.1E-98 T 01-11-2018 D3790_14155 a2a41cf170059b13ccfa5c60adbd663e 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 4.4E-140 T 01-11-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D3790_02180 714c1dc861cff20ddcec5249052bac18 193 Gene3D G3DSA:2.30.22.10 137 193 8.7E-26 T 01-11-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 D3790_02180 714c1dc861cff20ddcec5249052bac18 193 ProSitePatterns PS01071 grpE protein signature. 148 191 - T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D3790_02180 714c1dc861cff20ddcec5249052bac18 193 Gene3D G3DSA:3.90.20.20 33 136 4.8E-35 T 01-11-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 D3790_02180 714c1dc861cff20ddcec5249052bac18 193 SUPERFAMILY SSF51064 138 193 1.7E-18 T 01-11-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 D3790_02180 714c1dc861cff20ddcec5249052bac18 193 Pfam PF01025 GrpE 28 193 1.4E-49 T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D3790_02180 714c1dc861cff20ddcec5249052bac18 193 SUPERFAMILY SSF58014 47 137 2.48E-27 T 01-11-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 D3790_02180 714c1dc861cff20ddcec5249052bac18 193 PRINTS PR00773 GrpE protein signature 172 191 1.8E-27 T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D3790_02180 714c1dc861cff20ddcec5249052bac18 193 PRINTS PR00773 GrpE protein signature 90 105 1.8E-27 T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D3790_02180 714c1dc861cff20ddcec5249052bac18 193 PRINTS PR00773 GrpE protein signature 145 160 1.8E-27 T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D3790_02180 714c1dc861cff20ddcec5249052bac18 193 PRINTS PR00773 GrpE protein signature 62 78 1.8E-27 T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D3790_02180 714c1dc861cff20ddcec5249052bac18 193 Hamap MF_01151 Protein GrpE [grpE]. 10 193 21.76 T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D3790_14440 3ea61944a0aeb7fa54e1a0f4dd0ed4f7 334 SUPERFAMILY SSF51735 2 183 1.78E-44 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_14440 3ea61944a0aeb7fa54e1a0f4dd0ed4f7 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 8.5E-125 T 01-11-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D3790_14440 3ea61944a0aeb7fa54e1a0f4dd0ed4f7 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 5.5E-17 T 01-11-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D3790_14440 3ea61944a0aeb7fa54e1a0f4dd0ed4f7 334 SMART SM00859 3 146 4.5E-49 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 D3790_14440 3ea61944a0aeb7fa54e1a0f4dd0ed4f7 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 01-11-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D3790_14440 3ea61944a0aeb7fa54e1a0f4dd0ed4f7 334 Gene3D G3DSA:3.40.50.720 6 330 1.7E-125 T 01-11-2018 D3790_14440 3ea61944a0aeb7fa54e1a0f4dd0ed4f7 334 SUPERFAMILY SSF55347 154 308 3.79E-49 T 01-11-2018 D3790_14440 3ea61944a0aeb7fa54e1a0f4dd0ed4f7 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 3.5E-32 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 D3790_14440 3ea61944a0aeb7fa54e1a0f4dd0ed4f7 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 39.12 T 01-11-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D3790_14440 3ea61944a0aeb7fa54e1a0f4dd0ed4f7 334 Gene3D G3DSA:3.30.360.10 153 312 1.7E-125 T 01-11-2018 D3790_03690 d3ba9164ca0aa9c0b5ac43906ef4b596 289 Pfam PF02629 CoA binding domain 6 99 1.7E-31 T 01-11-2018 IPR003781 CoA-binding GO:0048037 D3790_03690 d3ba9164ca0aa9c0b5ac43906ef4b596 289 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 2.8E-146 T 01-11-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D3790_03690 d3ba9164ca0aa9c0b5ac43906ef4b596 289 SMART SM00881 4 100 2.3E-37 T 01-11-2018 IPR003781 CoA-binding GO:0048037 D3790_03690 d3ba9164ca0aa9c0b5ac43906ef4b596 289 Gene3D G3DSA:3.40.50.261 124 289 1.2E-77 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D3790_03690 d3ba9164ca0aa9c0b5ac43906ef4b596 289 PIRSF PIRSF001553 1 289 1.7E-135 T 01-11-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D3790_03690 d3ba9164ca0aa9c0b5ac43906ef4b596 289 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 01-11-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site D3790_03690 d3ba9164ca0aa9c0b5ac43906ef4b596 289 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 01-11-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site D3790_03690 d3ba9164ca0aa9c0b5ac43906ef4b596 289 SUPERFAMILY SSF52210 123 287 1.15E-57 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D3790_03690 d3ba9164ca0aa9c0b5ac43906ef4b596 289 Pfam PF00549 CoA-ligase 151 271 1.6E-21 T 01-11-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D3790_03690 d3ba9164ca0aa9c0b5ac43906ef4b596 289 Gene3D G3DSA:3.40.50.720 1 123 1.8E-51 T 01-11-2018 D3790_03690 d3ba9164ca0aa9c0b5ac43906ef4b596 289 SUPERFAMILY SSF51735 1 122 4.93E-44 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_03690 d3ba9164ca0aa9c0b5ac43906ef4b596 289 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.258 T 01-11-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D3790_03690 d3ba9164ca0aa9c0b5ac43906ef4b596 289 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.6E-39 T 01-11-2018 D3790_03690 d3ba9164ca0aa9c0b5ac43906ef4b596 289 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.6E-39 T 01-11-2018 D3790_03690 d3ba9164ca0aa9c0b5ac43906ef4b596 289 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.6E-39 T 01-11-2018 D3790_03690 d3ba9164ca0aa9c0b5ac43906ef4b596 289 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.6E-39 T 01-11-2018 D3790_16410 b1336efd3f5345751e1da704586a1d16 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 4.2E-13 T 01-11-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 D3790_16410 b1336efd3f5345751e1da704586a1d16 191 SUPERFAMILY SSF89360 1 97 7.46E-21 T 01-11-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D3790_16410 b1336efd3f5345751e1da704586a1d16 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 1.6E-100 T 01-11-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 D3790_16410 b1336efd3f5345751e1da704586a1d16 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 3.0E-26 T 01-11-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 D3790_16410 b1336efd3f5345751e1da704586a1d16 191 Gene3D G3DSA:2.60.300.12 1 98 1.3E-12 T 01-11-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D3790_16410 b1336efd3f5345751e1da704586a1d16 191 Gene3D G3DSA:3.30.300.130 101 188 9.8E-21 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily D3790_16410 b1336efd3f5345751e1da704586a1d16 191 SUPERFAMILY SSF117916 95 184 8.94E-25 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily D3790_16410 b1336efd3f5345751e1da704586a1d16 191 Pfam PF01106 NifU-like domain 111 177 1.7E-20 T 01-11-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 D3790_16410 b1336efd3f5345751e1da704586a1d16 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 45.705 T 01-11-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 D3790_04355 a2e2c2f4843dd1e4ff5b9a467baa7755 145 Pfam PF13551 Winged helix-turn helix 18 78 4.7E-9 T 01-11-2018 D3790_04355 a2e2c2f4843dd1e4ff5b9a467baa7755 145 SUPERFAMILY SSF46689 11 120 2.33E-5 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_13275 8deef4162650c0d24c8ce6979cbd81d1 154 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 7.7E-61 T 01-11-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 D3790_13275 8deef4162650c0d24c8ce6979cbd81d1 154 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 01-11-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 D3790_13275 8deef4162650c0d24c8ce6979cbd81d1 154 Pfam PF13353 4Fe-4S single cluster domain 12 151 1.3E-50 T 01-11-2018 D3790_13275 8deef4162650c0d24c8ce6979cbd81d1 154 SUPERFAMILY SSF102114 24 109 6.54E-7 T 01-11-2018 D3790_13275 8deef4162650c0d24c8ce6979cbd81d1 154 PIRSF PIRSF000368 1 154 3.9E-57 T 01-11-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 D3790_13275 8deef4162650c0d24c8ce6979cbd81d1 154 Gene3D G3DSA:3.20.20.70 2 154 1.3E-18 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_13710 2ad69f71179d864a7b70d4e001b1f7e7 401 SUPERFAMILY SSF103473 9 399 2.09E-34 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_13710 2ad69f71179d864a7b70d4e001b1f7e7 401 Pfam PF05977 Transmembrane secretion effector 17 387 2.8E-24 T 01-11-2018 IPR010290 Transmembrane secretion effector D3790_13710 2ad69f71179d864a7b70d4e001b1f7e7 401 Gene3D G3DSA:1.20.1250.20 7 397 1.6E-28 T 01-11-2018 D3790_18390 cf52dc11c7d84eb487b4a114d0a17032 884 SUPERFAMILY SSF55021 807 871 4.2E-10 T 01-11-2018 D3790_18390 cf52dc11c7d84eb487b4a114d0a17032 884 Pfam PF01909 Nucleotidyltransferase domain 67 124 6.4E-6 T 01-11-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 D3790_18390 cf52dc11c7d84eb487b4a114d0a17032 884 SUPERFAMILY SSF81301 26 183 3.52E-22 T 01-11-2018 D3790_18390 cf52dc11c7d84eb487b4a114d0a17032 884 Gene3D G3DSA:1.10.3210.10 449 574 6.8E-9 T 01-11-2018 D3790_18390 cf52dc11c7d84eb487b4a114d0a17032 884 SUPERFAMILY SSF55021 699 774 3.83E-9 T 01-11-2018 D3790_18390 cf52dc11c7d84eb487b4a114d0a17032 884 SMART SM00471 458 605 6.5E-10 T 01-11-2018 IPR003607 HD/PDEase domain D3790_18390 cf52dc11c7d84eb487b4a114d0a17032 884 Pfam PF01842 ACT domain 812 859 2.2E-8 T 01-11-2018 IPR002912 ACT domain D3790_18390 cf52dc11c7d84eb487b4a114d0a17032 884 SUPERFAMILY SSF109604 451 552 1.71E-13 T 01-11-2018 D3790_18390 cf52dc11c7d84eb487b4a114d0a17032 884 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 41 878 1.2E-303 T 01-11-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 D3790_18390 cf52dc11c7d84eb487b4a114d0a17032 884 Pfam PF08335 GlnD PII-uridylyltransferase 186 325 1.0E-36 T 01-11-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 D3790_18390 cf52dc11c7d84eb487b4a114d0a17032 884 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 884 328.671 T 01-11-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 D3790_18390 cf52dc11c7d84eb487b4a114d0a17032 884 Pfam PF01966 HD domain 462 595 5.2E-14 T 01-11-2018 IPR006674 HD domain D3790_18390 cf52dc11c7d84eb487b4a114d0a17032 884 SUPERFAMILY SSF81891 416 660 1.57E-10 T 01-11-2018 D3790_18390 cf52dc11c7d84eb487b4a114d0a17032 884 PIRSF PIRSF006288 20 884 0.0 T 01-11-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 D3790_18390 cf52dc11c7d84eb487b4a114d0a17032 884 SUPERFAMILY SSF81593 207 320 1.88E-10 T 01-11-2018 D3790_18390 cf52dc11c7d84eb487b4a114d0a17032 884 Gene3D G3DSA:3.30.70.260 804 882 1.1E-5 T 01-11-2018 D3790_05005 b4dd58022aa72312d7bcacefe7345d01 360 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 20 356 9.9E-122 T 01-11-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 D3790_05005 b4dd58022aa72312d7bcacefe7345d01 360 Pfam PF03601 Conserved hypothetical protein 698 22 337 1.1E-103 T 01-11-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 SUPERFAMILY SSF52151 1236 1529 8.89E-48 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 SUPERFAMILY SSF53901 699 1069 7.21E-83 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 Gene3D G3DSA:3.40.47.10 696 1149 9.0E-149 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 SUPERFAMILY SSF55048 1369 1434 5.36E-7 T 01-11-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1239 1557 1.7E-48 T 01-11-2018 IPR020801 Polyketide synthase, acyl transferase domain D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 ProSitePatterns PS00012 Phosphopantetheine attachment site. 635 650 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 ProSitePatterns PS00455 Putative AMP-binding domain signature. 206 217 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 Pfam PF00550 Phosphopantetheine attachment site 626 672 6.1E-7 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 SUPERFAMILY SSF47336 609 714 4.71E-12 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 Gene3D G3DSA:3.40.366.10 1237 1546 3.4E-87 T 01-11-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1078 1172 5.8E-9 T 01-11-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 Pfam PF00698 Acyl transferase domain 1239 1521 6.1E-34 T 01-11-2018 IPR014043 Acyl transferase D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 Gene3D G3DSA:1.10.1200.10 609 685 1.3E-6 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 959 1074 3.9E-32 T 01-11-2018 IPR014031 Beta-ketoacyl synthase, C-terminal D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 Gene3D G3DSA:3.40.50.12780 23 440 1.1E-72 T 01-11-2018 D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 Pfam PF00501 AMP-binding enzyme 47 444 1.4E-72 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 SUPERFAMILY SSF56801 39 578 7.85E-86 T 01-11-2018 D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 SMART SM00825 Beta-ketoacyl synthase 703 1123 1.5E-127 T 01-11-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 702 949 2.1E-74 T 01-11-2018 IPR014030 Beta-ketoacyl synthase, N-terminal D3790_07410 4e507889fb797d9fc04f72bc6af2ed5a 1644 Gene3D G3DSA:3.30.70.3290 1150 1590 3.4E-87 T 01-11-2018 D3790_13430 80a936b9b4f60c1567b78aa1263c99c2 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 01-11-2018 IPR033749 Polyprenyl synthetase, conserved site D3790_13430 80a936b9b4f60c1567b78aa1263c99c2 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 01-11-2018 IPR033749 Polyprenyl synthetase, conserved site D3790_13430 80a936b9b4f60c1567b78aa1263c99c2 323 Pfam PF00348 Polyprenyl synthetase 31 263 1.6E-76 T 01-11-2018 IPR000092 Polyprenyl synthetase GO:0008299 D3790_13430 80a936b9b4f60c1567b78aa1263c99c2 323 SUPERFAMILY SSF48576 5 322 8.35E-100 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily D3790_13430 80a936b9b4f60c1567b78aa1263c99c2 323 Gene3D G3DSA:1.10.600.10 1 322 4.5E-121 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily D3790_17505 14728f454f747c5296e2b16a35c12839 95 SUPERFAMILY SSF69754 1 95 1.44E-32 T 01-11-2018 IPR036567 Ribosome hibernation promotion factor-like D3790_17505 14728f454f747c5296e2b16a35c12839 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 1.6E-26 T 01-11-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 D3790_17505 14728f454f747c5296e2b16a35c12839 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 6.0E-31 T 01-11-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 D3790_17505 14728f454f747c5296e2b16a35c12839 95 Gene3D G3DSA:3.30.160.100 1 95 2.6E-35 T 01-11-2018 IPR036567 Ribosome hibernation promotion factor-like D3790_12865 a32668f2e516c28702b888f91894fe28 686 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 50 686 2.1E-96 T 01-11-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 D3790_12865 a32668f2e516c28702b888f91894fe28 686 Pfam PF00593 TonB dependent receptor 254 685 9.5E-36 T 01-11-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D3790_12865 a32668f2e516c28702b888f91894fe28 686 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 57 - T 01-11-2018 IPR010916 TonB box, conserved site D3790_12865 a32668f2e516c28702b888f91894fe28 686 Gene3D G3DSA:2.40.170.20 167 686 4.0E-85 T 01-11-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3790_12865 a32668f2e516c28702b888f91894fe28 686 SUPERFAMILY SSF56935 46 686 5.7E-76 T 01-11-2018 D3790_12865 a32668f2e516c28702b888f91894fe28 686 Gene3D G3DSA:2.170.130.10 57 166 9.3E-31 T 01-11-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D3790_12865 a32668f2e516c28702b888f91894fe28 686 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 161 2.0E-19 T 01-11-2018 IPR012910 TonB-dependent receptor, plug domain D3790_15015 dad90617e10a50543b53d6d1650bd770 379 Pfam PF00534 Glycosyl transferases group 1 192 345 1.6E-12 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 D3790_15015 dad90617e10a50543b53d6d1650bd770 379 Pfam PF13439 Glycosyltransferase Family 4 35 178 5.9E-11 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D3790_15015 dad90617e10a50543b53d6d1650bd770 379 Gene3D G3DSA:3.40.50.2000 195 360 1.8E-22 T 01-11-2018 D3790_15015 dad90617e10a50543b53d6d1650bd770 379 Gene3D G3DSA:3.40.50.2000 31 194 7.1E-15 T 01-11-2018 D3790_15015 dad90617e10a50543b53d6d1650bd770 379 SUPERFAMILY SSF53756 34 378 5.38E-41 T 01-11-2018 D3790_03890 059d053df5118bad2484d000834d4d77 81 Gene3D G3DSA:3.10.20.30 1 81 1.6E-26 T 01-11-2018 IPR012675 Beta-grasp domain superfamily D3790_03890 059d053df5118bad2484d000834d4d77 81 SUPERFAMILY SSF54285 1 81 1.1E-22 T 01-11-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp D3790_03890 059d053df5118bad2484d000834d4d77 81 Pfam PF02597 ThiS family 4 81 1.3E-20 T 01-11-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 D3790_03890 059d053df5118bad2484d000834d4d77 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 2.3E-24 T 01-11-2018 D3790_19685 c3be7dc07d6af7c0a39a823f0432f7ec 306 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 17 131 3.3E-21 T 01-11-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 D3790_19685 c3be7dc07d6af7c0a39a823f0432f7ec 306 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 133 246 5.1E-31 T 01-11-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 D3790_19685 c3be7dc07d6af7c0a39a823f0432f7ec 306 Gene3D G3DSA:1.20.120.920 96 292 4.1E-86 T 01-11-2018 D3790_19685 c3be7dc07d6af7c0a39a823f0432f7ec 306 Pfam PF01867 CRISPR associated protein Cas1 25 122 1.8E-5 T 01-11-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 D3790_19685 c3be7dc07d6af7c0a39a823f0432f7ec 306 Pfam PF01867 CRISPR associated protein Cas1 130 245 1.9E-10 T 01-11-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 D3790_19685 c3be7dc07d6af7c0a39a823f0432f7ec 306 TIGRFAM TIGR03638 cas1_ECOLI: CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI 7 273 5.9E-113 T 01-11-2018 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype GO:0004520|GO:0043571|GO:0046872 D3790_19685 c3be7dc07d6af7c0a39a823f0432f7ec 306 Gene3D G3DSA:3.100.10.20 1 95 1.9E-40 T 01-11-2018 D3790_19685 c3be7dc07d6af7c0a39a823f0432f7ec 306 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 14 280 17.845 T 01-11-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 D3790_11055 eed1112f2fce914624cd663c94d7efaa 168 PRINTS PR01576 Peptide deformylase signature 33 62 7.9E-33 T 01-11-2018 IPR023635 Peptide deformylase D3790_11055 eed1112f2fce914624cd663c94d7efaa 168 PRINTS PR01576 Peptide deformylase signature 89 100 7.9E-33 T 01-11-2018 IPR023635 Peptide deformylase D3790_11055 eed1112f2fce914624cd663c94d7efaa 168 PRINTS PR01576 Peptide deformylase signature 120 149 7.9E-33 T 01-11-2018 IPR023635 Peptide deformylase D3790_11055 eed1112f2fce914624cd663c94d7efaa 168 PRINTS PR01576 Peptide deformylase signature 101 119 7.9E-33 T 01-11-2018 IPR023635 Peptide deformylase D3790_11055 eed1112f2fce914624cd663c94d7efaa 168 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.791 T 01-11-2018 IPR023635 Peptide deformylase D3790_11055 eed1112f2fce914624cd663c94d7efaa 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 5.7E-52 T 01-11-2018 IPR023635 Peptide deformylase D3790_11055 eed1112f2fce914624cd663c94d7efaa 168 Gene3D G3DSA:3.90.45.10 1 168 1.1E-64 T 01-11-2018 IPR036821 Peptide deformylase superfamily D3790_11055 eed1112f2fce914624cd663c94d7efaa 168 SUPERFAMILY SSF56420 2 163 3.01E-59 T 01-11-2018 IPR036821 Peptide deformylase superfamily D3790_11055 eed1112f2fce914624cd663c94d7efaa 168 PIRSF PIRSF004749 1 168 1.1E-54 T 01-11-2018 IPR023635 Peptide deformylase D3790_11055 eed1112f2fce914624cd663c94d7efaa 168 Pfam PF01327 Polypeptide deformylase 4 152 5.8E-51 T 01-11-2018 IPR023635 Peptide deformylase D3790_18775 b4125835c1eb90ef2aa254797b27f48c 342 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 24 339 3.8E-166 T 01-11-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 D3790_18775 b4125835c1eb90ef2aa254797b27f48c 342 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 19 340 53.059 T 01-11-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 D3790_18775 b4125835c1eb90ef2aa254797b27f48c 342 Pfam PF01207 Dihydrouridine synthase (Dus) 27 336 4.9E-95 T 01-11-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 D3790_18775 b4125835c1eb90ef2aa254797b27f48c 342 Gene3D G3DSA:1.20.120.1460 268 342 4.9E-24 T 01-11-2018 D3790_18775 b4125835c1eb90ef2aa254797b27f48c 342 PIRSF PIRSF006621 13 340 6.7E-74 T 01-11-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 D3790_18775 b4125835c1eb90ef2aa254797b27f48c 342 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 105 123 - T 01-11-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 D3790_18775 b4125835c1eb90ef2aa254797b27f48c 342 Gene3D G3DSA:3.20.20.70 21 263 3.5E-72 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_18775 b4125835c1eb90ef2aa254797b27f48c 342 SUPERFAMILY SSF51395 24 334 2.48E-73 T 01-11-2018 D3790_09540 dfda9efa71b2812e046acf3188a1a5dc 695 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 691 1.7E-275 T 01-11-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 D3790_09540 dfda9efa71b2812e046acf3188a1a5dc 695 PIRSF PIRSF005419 15 694 2.3E-242 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 D3790_09540 dfda9efa71b2812e046acf3188a1a5dc 695 Pfam PF00771 FHIPEP family 31 683 2.8E-265 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 D3790_09540 dfda9efa71b2812e046acf3188a1a5dc 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 3.5E-56 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 D3790_09540 dfda9efa71b2812e046acf3188a1a5dc 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 3.5E-56 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 D3790_09540 dfda9efa71b2812e046acf3188a1a5dc 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 3.5E-56 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 D3790_09540 dfda9efa71b2812e046acf3188a1a5dc 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 3.5E-56 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 D3790_09540 dfda9efa71b2812e046acf3188a1a5dc 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 3.5E-56 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 D3790_09540 dfda9efa71b2812e046acf3188a1a5dc 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 3.5E-56 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 D3790_09540 dfda9efa71b2812e046acf3188a1a5dc 695 Gene3D G3DSA:1.10.8.540 507 595 5.1E-28 T 01-11-2018 D3790_09540 dfda9efa71b2812e046acf3188a1a5dc 695 Gene3D G3DSA:1.10.490.80 598 691 9.6E-6 T 01-11-2018 D3790_09540 dfda9efa71b2812e046acf3188a1a5dc 695 Gene3D G3DSA:3.40.30.60 363 506 1.7E-49 T 01-11-2018 D3790_09540 dfda9efa71b2812e046acf3188a1a5dc 695 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 01-11-2018 IPR025505 FHIPEP conserved site D3790_15425 9206e4034e097e10ad79ef6fb774fd93 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.65 T 01-11-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 D3790_15425 9206e4034e097e10ad79ef6fb774fd93 629 Gene3D G3DSA:1.10.150.570 569 622 4.8E-23 T 01-11-2018 D3790_15425 9206e4034e097e10ad79ef6fb774fd93 629 Gene3D G3DSA:3.50.50.60 2 240 2.0E-91 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_15425 9206e4034e097e10ad79ef6fb774fd93 629 Gene3D G3DSA:3.50.50.60 293 458 1.3E-56 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_15425 9206e4034e097e10ad79ef6fb774fd93 629 Gene3D G3DSA:1.10.10.1800 459 550 7.0E-29 T 01-11-2018 D3790_15425 9206e4034e097e10ad79ef6fb774fd93 629 SMART SM01228 546 617 8.9E-45 T 01-11-2018 D3790_15425 9206e4034e097e10ad79ef6fb774fd93 629 Pfam PF01134 Glucose inhibited division protein A 8 399 2.0E-170 T 01-11-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 D3790_15425 9206e4034e097e10ad79ef6fb774fd93 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 01-11-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 D3790_15425 9206e4034e097e10ad79ef6fb774fd93 629 SUPERFAMILY SSF51905 5 261 2.09E-49 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_15425 9206e4034e097e10ad79ef6fb774fd93 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 2.5E-296 T 01-11-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 D3790_15425 9206e4034e097e10ad79ef6fb774fd93 629 Pfam PF13932 GidA associated domain 402 616 3.2E-76 T 01-11-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 D3790_15425 9206e4034e097e10ad79ef6fb774fd93 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 01-11-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 D3790_05110 0c588788fc8979399fd2f5f159b0fc51 318 SUPERFAMILY SSF55174 19 70 1.3E-8 T 01-11-2018 D3790_05110 0c588788fc8979399fd2f5f159b0fc51 318 Gene3D G3DSA:3.30.2350.10 92 317 1.7E-85 T 01-11-2018 D3790_05110 0c588788fc8979399fd2f5f159b0fc51 318 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 314 6.8E-94 T 01-11-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_05110 0c588788fc8979399fd2f5f159b0fc51 318 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 01-11-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_05110 0c588788fc8979399fd2f5f159b0fc51 318 SMART SM00363 20 86 9.1E-7 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_05110 0c588788fc8979399fd2f5f159b0fc51 318 Gene3D G3DSA:3.10.290.10 5 72 5.8E-16 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D3790_05110 0c588788fc8979399fd2f5f159b0fc51 318 Pfam PF00849 RNA pseudouridylate synthase 101 248 1.2E-28 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_05110 0c588788fc8979399fd2f5f159b0fc51 318 Pfam PF01479 S4 domain 20 66 9.1E-10 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_05110 0c588788fc8979399fd2f5f159b0fc51 318 SUPERFAMILY SSF55120 90 315 9.44E-65 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_10955 9e15a19eb525d18c9015ad15fb344435 365 SUPERFAMILY SSF53756 6 353 2.55E-128 T 01-11-2018 D3790_10955 9e15a19eb525d18c9015ad15fb344435 365 Gene3D G3DSA:3.40.50.2000 162 319 3.4E-125 T 01-11-2018 D3790_10955 9e15a19eb525d18c9015ad15fb344435 365 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 5.6E-48 T 01-11-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_10955 9e15a19eb525d18c9015ad15fb344435 365 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 333 1.2E-37 T 01-11-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 D3790_10955 9e15a19eb525d18c9015ad15fb344435 365 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 2.2E-114 T 01-11-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_10955 9e15a19eb525d18c9015ad15fb344435 365 Gene3D G3DSA:3.40.50.2000 9 161 3.4E-125 T 01-11-2018 D3790_10955 9e15a19eb525d18c9015ad15fb344435 365 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 353 35.082 T 01-11-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_02730 058f5f091ee7ea259d433b7d2316fc5c 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 74 7.2E-22 T 01-11-2018 IPR025161 Putative transposase IS4/IS5 family D3790_02730 058f5f091ee7ea259d433b7d2316fc5c 253 Pfam PF01609 Transposase DDE domain 87 244 3.5E-21 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_06950 22822f9ddf153f0f729d9c42b61a261c 443 Gene3D G3DSA:3.90.1150.10 28 435 8.6E-151 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_06950 22822f9ddf153f0f729d9c42b61a261c 443 PIRSF PIRSF000521 30 142 9.1E-4 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_06950 22822f9ddf153f0f729d9c42b61a261c 443 PIRSF PIRSF000521 199 442 4.4E-18 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_06950 22822f9ddf153f0f729d9c42b61a261c 443 Pfam PF00202 Aminotransferase class-III 30 438 2.4E-86 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_06950 22822f9ddf153f0f729d9c42b61a261c 443 Gene3D G3DSA:3.40.640.10 64 346 8.6E-151 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_06950 22822f9ddf153f0f729d9c42b61a261c 443 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 251 288 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_06950 22822f9ddf153f0f729d9c42b61a261c 443 SUPERFAMILY SSF53383 15 441 2.18E-112 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_10715 0e60e2c72c98e989a29b80219fa63940 129 Pfam PF01597 Glycine cleavage H-protein 8 128 3.1E-47 T 01-11-2018 IPR033753 Glycine cleavage system H-protein/Simiate D3790_10715 0e60e2c72c98e989a29b80219fa63940 129 Gene3D G3DSA:2.40.50.100 2 129 5.9E-52 T 01-11-2018 D3790_10715 0e60e2c72c98e989a29b80219fa63940 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 40.327 T 01-11-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 D3790_10715 0e60e2c72c98e989a29b80219fa63940 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 129 2.6E-54 T 01-11-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 D3790_10715 0e60e2c72c98e989a29b80219fa63940 129 SUPERFAMILY SSF51230 4 128 5.37E-45 T 01-11-2018 IPR011053 Single hybrid motif D3790_10715 0e60e2c72c98e989a29b80219fa63940 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 01-11-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 D3790_12370 743db795b700fa98e7b84f48550a128d 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 1.6E-62 T 01-11-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D3790_12370 743db795b700fa98e7b84f48550a128d 150 SUPERFAMILY SSF52304 6 148 2.62E-63 T 01-11-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D3790_12370 743db795b700fa98e7b84f48550a128d 150 Gene3D G3DSA:3.40.50.9100 1 150 7.4E-69 T 01-11-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D3790_12370 743db795b700fa98e7b84f48550a128d 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 74.97 T 01-11-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D3790_12370 743db795b700fa98e7b84f48550a128d 150 PIRSF PIRSF001399 3 149 7.5E-61 T 01-11-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D3790_12370 743db795b700fa98e7b84f48550a128d 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 01-11-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D3790_12370 743db795b700fa98e7b84f48550a128d 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 20 150 1.0E-59 T 01-11-2018 D3790_12370 743db795b700fa98e7b84f48550a128d 150 Pfam PF01220 Dehydroquinase class II 6 142 7.4E-62 T 01-11-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D3790_00075 0530ec376467c42e4a0a41c6de7280dd 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 4.8E-100 T 01-11-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 D3790_00075 0530ec376467c42e4a0a41c6de7280dd 251 PIRSF PIRSF005457 1 251 3.9E-86 T 01-11-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 D3790_00075 0530ec376467c42e4a0a41c6de7280dd 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 3.0E-24 T 01-11-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 D3790_00075 0530ec376467c42e4a0a41c6de7280dd 251 SUPERFAMILY SSF56281 1 251 7.86E-68 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3790_00075 0530ec376467c42e4a0a41c6de7280dd 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 43.692 T 01-11-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 D3790_00075 0530ec376467c42e4a0a41c6de7280dd 251 Pfam PF00753 Metallo-beta-lactamase superfamily 13 165 5.5E-16 T 01-11-2018 IPR001279 Metallo-beta-lactamase D3790_00075 0530ec376467c42e4a0a41c6de7280dd 251 SMART SM00849 11 165 3.7E-34 T 01-11-2018 IPR001279 Metallo-beta-lactamase D3790_00075 0530ec376467c42e4a0a41c6de7280dd 251 Gene3D G3DSA:3.60.15.10 1 251 7.1E-95 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3790_09515 c5abf7067417fd02af1520f33dd1ca42 146 Gene3D G3DSA:1.20.58.300 3 119 3.7E-9 T 01-11-2018 D3790_09515 c5abf7067417fd02af1520f33dd1ca42 146 SUPERFAMILY SSF140566 1 118 1.96E-14 T 01-11-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 D3790_09515 c5abf7067417fd02af1520f33dd1ca42 146 Pfam PF05130 FlgN protein 1 134 1.7E-25 T 01-11-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 D3790_02120 3f54e7f91950f7a38f6ee1fa2fd6fb8d 71 Pfam PF11153 Protein of unknown function (DUF2931) 5 70 2.7E-7 T 01-11-2018 IPR021326 Protein of unknown function DUF2931 D3790_13160 1eb69b33e9592ffd82bbcea7fca873c1 44 Gene3D G3DSA:3.40.50.1100 3 30 7.7E-17 T 01-11-2018 D3790_13160 1eb69b33e9592ffd82bbcea7fca873c1 44 Gene3D G3DSA:3.40.50.1100 31 44 7.7E-17 T 01-11-2018 D3790_13160 1eb69b33e9592ffd82bbcea7fca873c1 44 SUPERFAMILY SSF53686 4 43 1.58E-11 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D3790_10890 9041d83099f9eeb1c053d7633f86cdfd 252 Gene3D G3DSA:2.60.440.10 9 252 3.0E-78 T 01-11-2018 IPR027462 Z ring-associated protein D, C-terminal D3790_10890 9041d83099f9eeb1c053d7633f86cdfd 252 Pfam PF07072 Cell division protein 22 230 2.9E-71 T 01-11-2018 IPR009777 Cell division protein ZapD D3790_10890 9041d83099f9eeb1c053d7633f86cdfd 252 Gene3D G3DSA:1.10.3900.10 16 182 3.0E-78 T 01-11-2018 D3790_10890 9041d83099f9eeb1c053d7633f86cdfd 252 SUPERFAMILY SSF160950 6 252 5.62E-84 T 01-11-2018 IPR036268 ZapD domain superfamily D3790_10890 9041d83099f9eeb1c053d7633f86cdfd 252 Hamap MF_01092 Cell division protein ZapD [zapD]. 7 252 31.003 T 01-11-2018 IPR009777 Cell division protein ZapD D3790_04200 9cc216936cfc1ccfe350826664a6f499 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 316 1.3E-33 T 01-11-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D3790_04200 9cc216936cfc1ccfe350826664a6f499 336 Gene3D G3DSA:3.40.50.720 7 328 2.0E-104 T 01-11-2018 D3790_04200 9cc216936cfc1ccfe350826664a6f499 336 SUPERFAMILY SSF51735 5 157 8.81E-43 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_04200 9cc216936cfc1ccfe350826664a6f499 336 SMART SM00859 6 121 1.3E-29 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 D3790_04200 9cc216936cfc1ccfe350826664a6f499 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 3.5E-25 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 D3790_04200 9cc216936cfc1ccfe350826664a6f499 336 SUPERFAMILY SSF55347 132 318 2.31E-49 T 01-11-2018 D3790_04200 9cc216936cfc1ccfe350826664a6f499 336 Gene3D G3DSA:3.30.360.10 130 314 2.0E-104 T 01-11-2018 D3790_04200 9cc216936cfc1ccfe350826664a6f499 336 PIRSF PIRSF000148 4 336 1.1E-90 T 01-11-2018 D3790_06860 3e85e6186f21e4c9f5d174cb9a59a46b 295 PIRSF PIRSF001365 1 295 4.9E-80 T 01-11-2018 IPR002220 DapA-like GO:0016829 D3790_06860 3e85e6186f21e4c9f5d174cb9a59a46b 295 SMART SM01130 5 295 1.5E-98 T 01-11-2018 IPR002220 DapA-like GO:0016829 D3790_06860 3e85e6186f21e4c9f5d174cb9a59a46b 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 6.0E-12 T 01-11-2018 IPR002220 DapA-like GO:0016829 D3790_06860 3e85e6186f21e4c9f5d174cb9a59a46b 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 6.0E-12 T 01-11-2018 IPR002220 DapA-like GO:0016829 D3790_06860 3e85e6186f21e4c9f5d174cb9a59a46b 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 6.0E-12 T 01-11-2018 IPR002220 DapA-like GO:0016829 D3790_06860 3e85e6186f21e4c9f5d174cb9a59a46b 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 6.0E-12 T 01-11-2018 IPR002220 DapA-like GO:0016829 D3790_06860 3e85e6186f21e4c9f5d174cb9a59a46b 295 SUPERFAMILY SSF51569 5 294 1.78E-85 T 01-11-2018 D3790_06860 3e85e6186f21e4c9f5d174cb9a59a46b 295 Gene3D G3DSA:3.20.20.70 5 295 2.3E-102 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_06860 3e85e6186f21e4c9f5d174cb9a59a46b 295 Pfam PF00701 Dihydrodipicolinate synthetase family 6 292 7.6E-56 T 01-11-2018 IPR002220 DapA-like GO:0016829 D3790_16800 a9891b05852b0704edc4461d60ef1a01 131 Pfam PF02635 DsrE/DsrF-like family 5 131 3.3E-28 T 01-11-2018 IPR003787 Sulphur relay, DsrE/F-like protein D3790_16800 a9891b05852b0704edc4461d60ef1a01 131 Gene3D G3DSA:3.40.1260.10 1 131 1.2E-54 T 01-11-2018 IPR027396 DsrEFH-like D3790_16800 a9891b05852b0704edc4461d60ef1a01 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 6 131 1.3E-52 T 01-11-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 D3790_16800 a9891b05852b0704edc4461d60ef1a01 131 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 4 131 39.415 T 01-11-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 D3790_16800 a9891b05852b0704edc4461d60ef1a01 131 SUPERFAMILY SSF75169 5 131 8.44E-37 T 01-11-2018 IPR027396 DsrEFH-like D3790_11735 c99858b165a6c3f9447e3f9dfa57dfa2 299 SUPERFAMILY SSF103481 43 145 4.32E-11 T 01-11-2018 D3790_11735 c99858b165a6c3f9447e3f9dfa57dfa2 299 SUPERFAMILY SSF103481 189 292 1.7E-12 T 01-11-2018 D3790_11735 c99858b165a6c3f9447e3f9dfa57dfa2 299 Pfam PF00892 EamA-like transporter family 156 287 2.4E-13 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D3790_11735 c99858b165a6c3f9447e3f9dfa57dfa2 299 Pfam PF00892 EamA-like transporter family 8 144 7.9E-15 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D3790_01585 76dcb173c290f6e0f15d94d2bb66e412 687 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 652 1.7E-267 T 01-11-2018 IPR022458 Conjugative coupling factor TraG/TraD D3790_01585 76dcb173c290f6e0f15d94d2bb66e412 687 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 652 0.0 T 01-11-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 D3790_01585 76dcb173c290f6e0f15d94d2bb66e412 687 Pfam PF12696 TraM recognition site of TraD and TraG 503 631 2.9E-11 T 01-11-2018 IPR032689 TraD/TraG, TraM recognition site D3790_01585 76dcb173c290f6e0f15d94d2bb66e412 687 SUPERFAMILY SSF52540 146 651 2.54E-53 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_01585 76dcb173c290f6e0f15d94d2bb66e412 687 Gene3D G3DSA:3.40.50.300 128 261 1.4E-10 T 01-11-2018 D3790_01585 76dcb173c290f6e0f15d94d2bb66e412 687 Gene3D G3DSA:3.40.50.300 421 655 1.9E-26 T 01-11-2018 D3790_01585 76dcb173c290f6e0f15d94d2bb66e412 687 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 183 225 1.5E-4 T 01-11-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain D3790_18710 f02ba11cdc4c4203608debf5b2e1e7a5 548 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 01-11-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_18710 f02ba11cdc4c4203608debf5b2e1e7a5 548 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 01-11-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_18710 f02ba11cdc4c4203608debf5b2e1e7a5 548 Gene3D G3DSA:3.40.50.10490 98 291 4.9E-240 T 01-11-2018 D3790_18710 f02ba11cdc4c4203608debf5b2e1e7a5 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 2.3E-55 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_18710 f02ba11cdc4c4203608debf5b2e1e7a5 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 2.3E-55 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_18710 f02ba11cdc4c4203608debf5b2e1e7a5 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 2.3E-55 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_18710 f02ba11cdc4c4203608debf5b2e1e7a5 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 2.3E-55 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_18710 f02ba11cdc4c4203608debf5b2e1e7a5 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 2.3E-55 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_18710 f02ba11cdc4c4203608debf5b2e1e7a5 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 2.3E-55 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_18710 f02ba11cdc4c4203608debf5b2e1e7a5 548 Gene3D G3DSA:3.40.50.10490 12 506 4.9E-240 T 01-11-2018 D3790_18710 f02ba11cdc4c4203608debf5b2e1e7a5 548 Gene3D G3DSA:1.10.1390.10 507 548 4.0E-20 T 01-11-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_18710 f02ba11cdc4c4203608debf5b2e1e7a5 548 SUPERFAMILY SSF53697 5 547 2.42E-224 T 01-11-2018 D3790_18710 f02ba11cdc4c4203608debf5b2e1e7a5 548 Pfam PF00342 Phosphoglucose isomerase 52 541 7.5E-257 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_18710 f02ba11cdc4c4203608debf5b2e1e7a5 548 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.176 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D3790_11010 763cddf8b69bd6ed51b090e716a49feb 164 Pfam PF13710 ACT domain 13 74 6.7E-15 T 01-11-2018 D3790_11010 763cddf8b69bd6ed51b090e716a49feb 164 SUPERFAMILY SSF55021 3 76 1.43E-21 T 01-11-2018 D3790_11010 763cddf8b69bd6ed51b090e716a49feb 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 2 160 1.3E-67 T 01-11-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 D3790_11010 763cddf8b69bd6ed51b090e716a49feb 164 Gene3D G3DSA:3.30.70.1150 81 158 3.3E-26 T 01-11-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal D3790_11010 763cddf8b69bd6ed51b090e716a49feb 164 SUPERFAMILY SSF55021 80 163 3.08E-25 T 01-11-2018 D3790_11010 763cddf8b69bd6ed51b090e716a49feb 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 77 1.0E-35 T 01-11-2018 D3790_11010 763cddf8b69bd6ed51b090e716a49feb 164 Pfam PF10369 Small subunit of acetolactate synthase 85 159 1.5E-22 T 01-11-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 D3790_11010 763cddf8b69bd6ed51b090e716a49feb 164 Gene3D G3DSA:3.30.70.260 1 80 5.0E-35 T 01-11-2018 D3790_18140 2d5a3bc6c948d82ba1315f171b5e7a4c 235 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_18140 2d5a3bc6c948d82ba1315f171b5e7a4c 235 Gene3D G3DSA:3.40.50.300 1 228 4.9E-63 T 01-11-2018 D3790_18140 2d5a3bc6c948d82ba1315f171b5e7a4c 235 Pfam PF00005 ABC transporter 19 157 5.0E-35 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_18140 2d5a3bc6c948d82ba1315f171b5e7a4c 235 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 212 8.8E-102 T 01-11-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 D3790_18140 2d5a3bc6c948d82ba1315f171b5e7a4c 235 SMART SM00382 24 209 8.0E-19 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_18140 2d5a3bc6c948d82ba1315f171b5e7a4c 235 SUPERFAMILY SSF52540 1 225 3.79E-65 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_12750 2a27bb306838d097043cee48c2406811 285 SUPERFAMILY SSF88946 12 122 2.22E-39 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D3790_12750 2a27bb306838d097043cee48c2406811 285 SUPERFAMILY SSF88659 200 283 1.21E-18 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D3790_12750 2a27bb306838d097043cee48c2406811 285 Gene3D G3DSA:1.10.10.10 214 283 1.3E-15 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_12750 2a27bb306838d097043cee48c2406811 285 Pfam PF04542 Sigma-70 region 2 53 122 1.2E-16 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D3790_12750 2a27bb306838d097043cee48c2406811 285 Pfam PF04545 Sigma-70, region 4 229 280 2.9E-16 T 01-11-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 D3790_12750 2a27bb306838d097043cee48c2406811 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 282 1.0E-35 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D3790_12750 2a27bb306838d097043cee48c2406811 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_12750 2a27bb306838d097043cee48c2406811 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 284 1.6E-129 T 01-11-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 D3790_12750 2a27bb306838d097043cee48c2406811 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 4.5E-19 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_12750 2a27bb306838d097043cee48c2406811 285 PRINTS PR00046 Major sigma-70 factor signature 253 268 4.5E-19 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_12750 2a27bb306838d097043cee48c2406811 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 4.5E-19 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_12750 2a27bb306838d097043cee48c2406811 285 PRINTS PR00046 Major sigma-70 factor signature 268 279 4.5E-19 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_12750 2a27bb306838d097043cee48c2406811 285 PIRSF PIRSF000770 4 285 6.6E-34 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_12750 2a27bb306838d097043cee48c2406811 285 Gene3D G3DSA:1.20.120.1810 4 122 9.2E-28 T 01-11-2018 D3790_12750 2a27bb306838d097043cee48c2406811 285 Pfam PF00140 Sigma-70 factor, region 1.2 24 40 1.7E-4 T 01-11-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D3790_12750 2a27bb306838d097043cee48c2406811 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D3790_12750 2a27bb306838d097043cee48c2406811 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 54.378 T 01-11-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 D3790_06700 852db4e896fe662ba374fd79cd71764b 222 PIRSF PIRSF006755 1 222 7.6E-63 T 01-11-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 D3790_06700 852db4e896fe662ba374fd79cd71764b 222 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 202 23.38 T 01-11-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 D3790_06700 852db4e896fe662ba374fd79cd71764b 222 SUPERFAMILY SSF52540 1 206 1.43E-49 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_06700 852db4e896fe662ba374fd79cd71764b 222 Pfam PF13500 AAA domain 4 200 6.2E-28 T 01-11-2018 D3790_06700 852db4e896fe662ba374fd79cd71764b 222 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 169 6.1E-38 T 01-11-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 D3790_06700 852db4e896fe662ba374fd79cd71764b 222 Gene3D G3DSA:3.40.50.300 3 217 8.6E-49 T 01-11-2018 D3790_11600 7381bae6d839db42f2bde73517f9c2b6 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.6E-11 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D3790_11600 7381bae6d839db42f2bde73517f9c2b6 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.6E-11 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D3790_11600 7381bae6d839db42f2bde73517f9c2b6 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.6E-11 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D3790_11600 7381bae6d839db42f2bde73517f9c2b6 164 PIRSF PIRSF001467 1 164 1.3E-29 T 01-11-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 D3790_11600 7381bae6d839db42f2bde73517f9c2b6 164 SUPERFAMILY SSF50891 1 162 4.38E-59 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily D3790_11600 7381bae6d839db42f2bde73517f9c2b6 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 161 3.1E-47 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D3790_11600 7381bae6d839db42f2bde73517f9c2b6 164 Gene3D G3DSA:2.40.100.10 1 164 1.4E-70 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily D3790_11600 7381bae6d839db42f2bde73517f9c2b6 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 01-11-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 D3790_04215 200b94d909990e26f72828d14ed4d585 304 Pfam PF00892 EamA-like transporter family 4 136 9.2E-22 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D3790_04215 200b94d909990e26f72828d14ed4d585 304 Pfam PF00892 EamA-like transporter family 151 281 2.5E-18 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D3790_04215 200b94d909990e26f72828d14ed4d585 304 SUPERFAMILY SSF103481 36 139 3.4E-12 T 01-11-2018 D3790_04215 200b94d909990e26f72828d14ed4d585 304 SUPERFAMILY SSF103481 188 283 9.02E-12 T 01-11-2018 D3790_08490 7c42e5b6b43da0f9ee10f95593d557d5 128 Gene3D G3DSA:2.60.40.1220 31 128 1.9E-27 T 01-11-2018 D3790_08490 7c42e5b6b43da0f9ee10f95593d557d5 128 Pfam PF04234 CopC domain 31 127 7.4E-25 T 01-11-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 D3790_08490 7c42e5b6b43da0f9ee10f95593d557d5 128 SUPERFAMILY SSF81296 30 128 1.4E-25 T 01-11-2018 IPR014756 Immunoglobulin E-set D3790_08315 2cf7dad18bb42e1e8e9902c08129d213 553 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 5 552 41.609 T 01-11-2018 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 D3790_08315 2cf7dad18bb42e1e8e9902c08129d213 553 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 12 241 7.5E-31 T 01-11-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 D3790_16500 419dc22f46bf641e16dbb048605dcd62 306 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 1.5E-174 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D3790_16500 419dc22f46bf641e16dbb048605dcd62 306 SUPERFAMILY SSF55681 8 292 5.47E-133 T 01-11-2018 D3790_16500 419dc22f46bf641e16dbb048605dcd62 306 Gene3D G3DSA:3.30.930.10 1 214 1.0E-110 T 01-11-2018 D3790_16500 419dc22f46bf641e16dbb048605dcd62 306 Gene3D G3DSA:1.20.58.180 215 297 8.9E-34 T 01-11-2018 D3790_16500 419dc22f46bf641e16dbb048605dcd62 306 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 2.0E-149 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D3790_16500 419dc22f46bf641e16dbb048605dcd62 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.2E-71 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D3790_16500 419dc22f46bf641e16dbb048605dcd62 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.2E-71 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D3790_16500 419dc22f46bf641e16dbb048605dcd62 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.2E-71 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D3790_16500 419dc22f46bf641e16dbb048605dcd62 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.2E-71 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D3790_16500 419dc22f46bf641e16dbb048605dcd62 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.2E-71 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D3790_16500 419dc22f46bf641e16dbb048605dcd62 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.2E-71 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D3790_16500 419dc22f46bf641e16dbb048605dcd62 306 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.116 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D3790_13390 615138bb271bfffdc36071c62477a203 637 Gene3D G3DSA:1.20.58.760 401 604 1.6E-69 T 01-11-2018 D3790_13390 615138bb271bfffdc36071c62477a203 637 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 613 37.305 T 01-11-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 D3790_13390 615138bb271bfffdc36071c62477a203 637 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 104 597 3.9E-246 T 01-11-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 D3790_13390 615138bb271bfffdc36071c62477a203 637 Gene3D G3DSA:2.40.50.920 27 102 1.7E-29 T 01-11-2018 D3790_13390 615138bb271bfffdc36071c62477a203 637 Gene3D G3DSA:3.40.50.300 145 324 3.8E-70 T 01-11-2018 D3790_13390 615138bb271bfffdc36071c62477a203 637 SMART SM00382 188 327 1.9E-26 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_13390 615138bb271bfffdc36071c62477a203 637 Gene3D G3DSA:1.10.8.60 326 400 3.0E-28 T 01-11-2018 D3790_13390 615138bb271bfffdc36071c62477a203 637 Pfam PF01434 Peptidase family M41 386 595 2.8E-81 T 01-11-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 D3790_13390 615138bb271bfffdc36071c62477a203 637 Pfam PF06480 FtsH Extracellular 8 97 1.6E-14 T 01-11-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 D3790_13390 615138bb271bfffdc36071c62477a203 637 SUPERFAMILY SSF140990 406 605 1.44E-72 T 01-11-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 D3790_13390 615138bb271bfffdc36071c62477a203 637 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 01-11-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 D3790_13390 615138bb271bfffdc36071c62477a203 637 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 7.7E-46 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D3790_13390 615138bb271bfffdc36071c62477a203 637 SUPERFAMILY SSF52540 145 395 9.89E-73 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_03280 55996d2c6e95974a971de6d28731bc09 295 SUPERFAMILY SSF53850 1 267 5.37E-59 T 01-11-2018 D3790_03280 55996d2c6e95974a971de6d28731bc09 295 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 264 3.7E-45 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3790_03280 55996d2c6e95974a971de6d28731bc09 295 Gene3D G3DSA:3.40.190.10 24 269 3.1E-95 T 01-11-2018 D3790_03280 55996d2c6e95974a971de6d28731bc09 295 Gene3D G3DSA:3.40.190.10 128 223 3.1E-95 T 01-11-2018 D3790_03280 55996d2c6e95974a971de6d28731bc09 295 SMART SM00062 34 266 2.2E-56 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3790_07835 3da470d78f6fea695a5ccd93228f977c 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 1.1E-26 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 D3790_07835 3da470d78f6fea695a5ccd93228f977c 369 Pfam PF00107 Zinc-binding dehydrogenase 197 329 8.0E-23 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 D3790_07835 3da470d78f6fea695a5ccd93228f977c 369 Gene3D G3DSA:3.40.50.720 174 312 8.6E-150 T 01-11-2018 D3790_07835 3da470d78f6fea695a5ccd93228f977c 369 SUPERFAMILY SSF50129 1 185 2.89E-71 T 01-11-2018 IPR011032 GroES-like superfamily D3790_07835 3da470d78f6fea695a5ccd93228f977c 369 Gene3D G3DSA:3.90.180.10 6 364 8.6E-150 T 01-11-2018 D3790_07835 3da470d78f6fea695a5ccd93228f977c 369 SUPERFAMILY SSF51735 161 333 5.19E-46 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_07835 3da470d78f6fea695a5ccd93228f977c 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 01-11-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 D3790_07835 3da470d78f6fea695a5ccd93228f977c 369 SUPERFAMILY SSF50129 318 369 1.32E-10 T 01-11-2018 IPR011032 GroES-like superfamily D3790_07835 3da470d78f6fea695a5ccd93228f977c 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 2.0E-221 T 01-11-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 D3790_07835 3da470d78f6fea695a5ccd93228f977c 369 SMART SM00829 10 367 6.9E-5 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 D3790_01260 bb2dde8363c392fd6921678d2a00fce4 477 Pfam PF01609 Transposase DDE domain 230 311 2.0E-5 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_01260 bb2dde8363c392fd6921678d2a00fce4 477 Pfam PF13751 Transposase DDE domain 343 461 5.6E-16 T 01-11-2018 IPR025668 Transposase DDE domain D3790_01260 bb2dde8363c392fd6921678d2a00fce4 477 Pfam PF05598 Transposase domain (DUF772) 56 122 3.6E-19 T 01-11-2018 IPR008490 Transposase InsH, N-terminal D3790_09015 8a7b84a2f514654ebb429dfee9e41d19 466 Pfam PF07157 DNA circularisation protein N-terminus 22 108 4.9E-30 T 01-11-2018 IPR009826 DNA circulation, N-terminal D3790_09015 8a7b84a2f514654ebb429dfee9e41d19 466 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 26 144 4.0E-23 T 01-11-2018 IPR009826 DNA circulation, N-terminal D3790_06650 c65d840b7d264b787fa7732b02ec60a8 146 Pfam PF10754 Protein of unknown function (DUF2569) 8 143 5.4E-40 T 01-11-2018 IPR019690 Protein of unknown function DUF2569 D3790_08915 996657e25acbdd689de7982510175501 155 SUPERFAMILY SSF46689 22 128 8.24E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_08915 996657e25acbdd689de7982510175501 155 Pfam PF13551 Winged helix-turn helix 30 90 5.2E-12 T 01-11-2018 D3790_19575 849123ef3fd2df257b7a35855337240b 425 Gene3D G3DSA:3.40.50.12780 8 325 1.6E-38 T 01-11-2018 D3790_19575 849123ef3fd2df257b7a35855337240b 425 TIGRFAM TIGR02304 aden_form_hyp: putative adenylate-forming enzyme 2 423 9.1E-168 T 01-11-2018 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related D3790_10940 5bf5075478154bdbb43e85bfd99accfd 271 Gene3D G3DSA:3.40.50.11690 127 258 1.2E-44 T 01-11-2018 D3790_10940 5bf5075478154bdbb43e85bfd99accfd 271 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 26 252 23.718 T 01-11-2018 IPR026579 Cell division protein FtsQ GO:0090529 D3790_10940 5bf5075478154bdbb43e85bfd99accfd 271 Pfam PF03799 Cell division protein FtsQ 130 244 1.4E-24 T 01-11-2018 IPR005548 Cell division protein FtsQ/DivIB D3790_10940 5bf5075478154bdbb43e85bfd99accfd 271 Pfam PF08478 POTRA domain, FtsQ-type 57 126 1.2E-20 T 01-11-2018 IPR013685 POTRA domain, FtsQ-type D3790_10940 5bf5075478154bdbb43e85bfd99accfd 271 Gene3D G3DSA:3.10.20.310 58 126 4.0E-32 T 01-11-2018 D3790_01540 301cdc002ca21e4a7c0497c532009ac4 225 SUPERFAMILY SSF53098 82 210 5.31E-30 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_01540 301cdc002ca21e4a7c0497c532009ac4 225 Gene3D G3DSA:3.30.420.10 88 221 4.4E-9 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_01540 301cdc002ca21e4a7c0497c532009ac4 225 Pfam PF00665 Integrase core domain 90 200 1.8E-23 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 D3790_11370 a0f1b99939fed9e1da3c68c633c4fb57 582 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_11370 a0f1b99939fed9e1da3c68c633c4fb57 582 Pfam PF00664 ABC transporter transmembrane region 21 291 3.8E-39 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D3790_11370 a0f1b99939fed9e1da3c68c633c4fb57 582 SMART SM00382 361 547 3.9E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_11370 a0f1b99939fed9e1da3c68c633c4fb57 582 Gene3D G3DSA:1.20.1560.10 4 318 5.2E-72 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_11370 a0f1b99939fed9e1da3c68c633c4fb57 582 SUPERFAMILY SSF52540 335 572 3.09E-80 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_11370 a0f1b99939fed9e1da3c68c633c4fb57 582 SUPERFAMILY SSF90123 7 322 8.24E-69 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_11370 a0f1b99939fed9e1da3c68c633c4fb57 582 Gene3D G3DSA:3.40.50.300 333 580 7.6E-79 T 01-11-2018 D3790_11370 a0f1b99939fed9e1da3c68c633c4fb57 582 Pfam PF00005 ABC transporter 353 500 2.6E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_03510 a94471b7e0466a9e875acab59d36c3c0 329 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 277 319 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 D3790_03510 a94471b7e0466a9e875acab59d36c3c0 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 292 307 1.5E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D3790_03510 a94471b7e0466a9e875acab59d36c3c0 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 307 323 1.5E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D3790_03510 a94471b7e0466a9e875acab59d36c3c0 329 SUPERFAMILY SSF52317 6 201 7.99E-22 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_03510 a94471b7e0466a9e875acab59d36c3c0 329 SUPERFAMILY SSF46689 224 274 8.06E-6 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_03510 a94471b7e0466a9e875acab59d36c3c0 329 Pfam PF12833 Helix-turn-helix domain 246 324 1.2E-20 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D3790_03510 a94471b7e0466a9e875acab59d36c3c0 329 Gene3D G3DSA:1.10.10.60 221 327 3.8E-28 T 01-11-2018 D3790_03510 a94471b7e0466a9e875acab59d36c3c0 329 SUPERFAMILY SSF46689 276 327 8.96E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_03510 a94471b7e0466a9e875acab59d36c3c0 329 Gene3D G3DSA:3.40.50.880 1 210 4.3E-31 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_03510 a94471b7e0466a9e875acab59d36c3c0 329 SMART SM00342 240 323 4.8E-28 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D3790_08410 281c2324e0831da6c7f1bcd36a4d11e4 287 SUPERFAMILY SSF56112 2 271 2.92E-39 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily D3790_08410 281c2324e0831da6c7f1bcd36a4d11e4 287 PIRSF PIRSF006221 1 287 5.4E-87 T 01-11-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 D3790_08410 281c2324e0831da6c7f1bcd36a4d11e4 287 Gene3D G3DSA:3.90.1200.10 98 286 1.9E-55 T 01-11-2018 D3790_08410 281c2324e0831da6c7f1bcd36a4d11e4 287 Gene3D G3DSA:3.30.200.20 1 92 1.6E-19 T 01-11-2018 D3790_08410 281c2324e0831da6c7f1bcd36a4d11e4 287 Pfam PF03881 Fructosamine kinase 1 285 4.2E-114 T 01-11-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 D3790_17845 a5ac0af60c5e187228a04cc3a8f3f398 138 SUPERFAMILY SSF56349 61 126 1.15E-19 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_17845 a5ac0af60c5e187228a04cc3a8f3f398 138 Pfam PF00589 Phage integrase family 51 114 5.1E-17 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D3790_17845 a5ac0af60c5e187228a04cc3a8f3f398 138 Gene3D G3DSA:1.10.443.10 25 129 1.3E-18 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_07245 91ae0a563e073bbf1813ffd8294d8150 270 Pfam PF13614 AAA domain 3 162 2.7E-21 T 01-11-2018 IPR025669 AAA domain D3790_07245 91ae0a563e073bbf1813ffd8294d8150 270 Gene3D G3DSA:3.40.50.300 1 260 8.0E-76 T 01-11-2018 D3790_07245 91ae0a563e073bbf1813ffd8294d8150 270 PIRSF PIRSF003092 1 270 1.4E-97 T 01-11-2018 IPR025501 ATP binding protein MinD D3790_07245 91ae0a563e073bbf1813ffd8294d8150 270 SUPERFAMILY SSF52540 1 268 5.49E-54 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_07245 91ae0a563e073bbf1813ffd8294d8150 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.8E-112 T 01-11-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 D3790_10935 d56aca125d2550eaf70c25ccd7774cb9 418 Gene3D G3DSA:3.30.1490.110 87 169 1.7E-116 T 01-11-2018 D3790_10935 d56aca125d2550eaf70c25ccd7774cb9 418 SUPERFAMILY SSF53067 8 221 2.1E-61 T 01-11-2018 D3790_10935 d56aca125d2550eaf70c25ccd7774cb9 418 PIRSF PIRSF003101 1 418 1.3E-153 T 01-11-2018 IPR020823 Cell division protein FtsA D3790_10935 d56aca125d2550eaf70c25ccd7774cb9 418 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 8.3E-162 T 01-11-2018 IPR020823 Cell division protein FtsA D3790_10935 d56aca125d2550eaf70c25ccd7774cb9 418 Gene3D G3DSA:3.30.420.40 197 359 1.7E-116 T 01-11-2018 D3790_10935 d56aca125d2550eaf70c25ccd7774cb9 418 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 418 29.631 T 01-11-2018 IPR020823 Cell division protein FtsA D3790_10935 d56aca125d2550eaf70c25ccd7774cb9 418 Pfam PF14450 Cell division protein FtsA 207 381 2.0E-25 T 01-11-2018 D3790_10935 d56aca125d2550eaf70c25ccd7774cb9 418 Gene3D G3DSA:3.30.420.40 13 379 1.7E-116 T 01-11-2018 D3790_10935 d56aca125d2550eaf70c25ccd7774cb9 418 Gene3D G3DSA:3.90.640.10 235 300 1.7E-116 T 01-11-2018 D3790_10935 d56aca125d2550eaf70c25ccd7774cb9 418 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 1.0E-29 T 01-11-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 D3790_10935 d56aca125d2550eaf70c25ccd7774cb9 418 SMART SM00842 10 196 9.7E-96 T 01-11-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 D3790_10935 d56aca125d2550eaf70c25ccd7774cb9 418 SUPERFAMILY SSF53067 198 384 5.04E-48 T 01-11-2018 D3790_06380 1c38bbd5a1b50b5d790849cbe0265438 568 Pfam PF00916 Sulfate permease family 24 387 6.6E-85 T 01-11-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 D3790_06380 1c38bbd5a1b50b5d790849cbe0265438 568 SUPERFAMILY SSF52091 442 533 4.91E-7 T 01-11-2018 IPR036513 STAS domain superfamily D3790_06380 1c38bbd5a1b50b5d790849cbe0265438 568 Gene3D G3DSA:3.30.750.24 436 564 6.2E-17 T 01-11-2018 IPR036513 STAS domain superfamily D3790_06380 1c38bbd5a1b50b5d790849cbe0265438 568 Pfam PF01740 STAS domain 444 536 1.6E-10 T 01-11-2018 IPR002645 STAS domain D3790_10115 b8712589c57dfe0be52e844aaf3e84cf 211 Gene3D G3DSA:3.10.20.400 5 102 1.3E-33 T 01-11-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 D3790_10115 b8712589c57dfe0be52e844aaf3e84cf 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 120 203 2.2E-30 T 01-11-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 D3790_10115 b8712589c57dfe0be52e844aaf3e84cf 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 4.6E-31 T 01-11-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 D3790_10115 b8712589c57dfe0be52e844aaf3e84cf 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 121 206 7.7E-17 T 01-11-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 D3790_10115 b8712589c57dfe0be52e844aaf3e84cf 211 SUPERFAMILY SSF101386 119 207 2.99E-23 T 01-11-2018 D3790_10115 b8712589c57dfe0be52e844aaf3e84cf 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 2.0E-22 T 01-11-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 D3790_10115 b8712589c57dfe0be52e844aaf3e84cf 211 SUPERFAMILY SSF141734 13 127 1.09E-45 T 01-11-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 D3790_10115 b8712589c57dfe0be52e844aaf3e84cf 211 Gene3D G3DSA:1.10.287.1080 117 209 2.5E-28 T 01-11-2018 D3790_10115 b8712589c57dfe0be52e844aaf3e84cf 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 208 37.586 T 01-11-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 D3790_10115 b8712589c57dfe0be52e844aaf3e84cf 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 117 203 18.442 T 01-11-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 D3790_12465 5623b9b15ad562800fbe90a1791d31e9 315 Gene3D G3DSA:1.10.10.10 24 105 1.6E-15 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_12465 5623b9b15ad562800fbe90a1791d31e9 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 82 2.2E-14 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_12465 5623b9b15ad562800fbe90a1791d31e9 315 Gene3D G3DSA:3.40.190.290 110 304 1.3E-27 T 01-11-2018 D3790_12465 5623b9b15ad562800fbe90a1791d31e9 315 Pfam PF03466 LysR substrate binding domain 107 302 1.3E-24 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_12465 5623b9b15ad562800fbe90a1791d31e9 315 SUPERFAMILY SSF53850 108 303 5.43E-28 T 01-11-2018 D3790_12465 5623b9b15ad562800fbe90a1791d31e9 315 SUPERFAMILY SSF46785 24 130 5.12E-17 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_14510 157b45e0c5cb97b5f0343d7d330a3ed2 71 Pfam PF01197 Ribosomal protein L31 1 64 3.5E-29 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14510 157b45e0c5cb97b5f0343d7d330a3ed2 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 1.4E-33 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14510 157b45e0c5cb97b5f0343d7d330a3ed2 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 30.418 T 01-11-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14510 157b45e0c5cb97b5f0343d7d330a3ed2 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14510 157b45e0c5cb97b5f0343d7d330a3ed2 71 Gene3D G3DSA:2.30.170.50 1 70 9.0E-33 T 01-11-2018 D3790_14510 157b45e0c5cb97b5f0343d7d330a3ed2 71 SUPERFAMILY SSF143800 1 66 1.53E-26 T 01-11-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14510 157b45e0c5cb97b5f0343d7d330a3ed2 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 2.0E-22 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14510 157b45e0c5cb97b5f0343d7d330a3ed2 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.0E-22 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14510 157b45e0c5cb97b5f0343d7d330a3ed2 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 2.0E-22 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_03270 42fc698928837456c97464697a5b02a1 224 Gene3D G3DSA:1.10.3720.10 2 224 1.6E-49 T 01-11-2018 IPR035906 MetI-like superfamily D3790_03270 42fc698928837456c97464697a5b02a1 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 2.2E-16 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_03270 42fc698928837456c97464697a5b02a1 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 8.4E-23 T 01-11-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 D3790_03270 42fc698928837456c97464697a5b02a1 224 SUPERFAMILY SSF161098 14 209 1.11E-37 T 01-11-2018 IPR035906 MetI-like superfamily D3790_16385 77f3e821014c6099c5d767fc97e8971f 501 Gene3D G3DSA:3.50.50.60 5 366 1.4E-145 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_16385 77f3e821014c6099c5d767fc97e8971f 501 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 494 8.7E-12 T 01-11-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D3790_16385 77f3e821014c6099c5d767fc97e8971f 501 Gene3D G3DSA:1.10.8.870 393 462 4.5E-25 T 01-11-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D3790_16385 77f3e821014c6099c5d767fc97e8971f 501 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D3790_16385 77f3e821014c6099c5d767fc97e8971f 501 Gene3D G3DSA:3.30.9.10 82 320 1.4E-145 T 01-11-2018 D3790_16385 77f3e821014c6099c5d767fc97e8971f 501 SUPERFAMILY SSF51905 1 374 6.87E-37 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_16385 77f3e821014c6099c5d767fc97e8971f 501 SUPERFAMILY SSF54373 226 319 4.32E-8 T 01-11-2018 D3790_16385 77f3e821014c6099c5d767fc97e8971f 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 2.7E-28 T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D3790_16385 77f3e821014c6099c5d767fc97e8971f 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 2.7E-28 T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D3790_16385 77f3e821014c6099c5d767fc97e8971f 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 2.7E-28 T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D3790_16385 77f3e821014c6099c5d767fc97e8971f 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 2.7E-28 T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D3790_16385 77f3e821014c6099c5d767fc97e8971f 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 2.7E-28 T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D3790_16385 77f3e821014c6099c5d767fc97e8971f 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 2.7E-28 T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D3790_16385 77f3e821014c6099c5d767fc97e8971f 501 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D3790_16385 77f3e821014c6099c5d767fc97e8971f 501 Pfam PF01266 FAD dependent oxidoreductase 5 323 3.9E-49 T 01-11-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 D3790_18415 13437a67c04fcf52062e17cc39618b08 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 28.224 T 01-11-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 D3790_18415 13437a67c04fcf52062e17cc39618b08 185 SUPERFAMILY SSF55194 2 184 8.77E-73 T 01-11-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 D3790_18415 13437a67c04fcf52062e17cc39618b08 185 Gene3D G3DSA:1.10.132.20 101 185 1.2E-27 T 01-11-2018 D3790_18415 13437a67c04fcf52062e17cc39618b08 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 2.3E-79 T 01-11-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 D3790_18415 13437a67c04fcf52062e17cc39618b08 185 Gene3D G3DSA:1.10.132.20 1 35 2.2E-9 T 01-11-2018 D3790_18415 13437a67c04fcf52062e17cc39618b08 185 Pfam PF01765 Ribosome recycling factor 20 183 2.1E-64 T 01-11-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 D3790_18415 13437a67c04fcf52062e17cc39618b08 185 Gene3D G3DSA:3.30.1360.40 36 100 3.8E-31 T 01-11-2018 D3790_17920 c689d9256ab83dcace49cf97a1aea3f9 128 SMART SM00507 52 108 5.4E-5 T 01-11-2018 IPR003615 HNH nuclease D3790_17920 c689d9256ab83dcace49cf97a1aea3f9 128 Pfam PF01844 HNH endonuclease 64 111 4.9E-10 T 01-11-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 D3790_15690 02a5763010d1cde8557a6b422c7c3eee 542 SUPERFAMILY SSF48179 189 294 7.31E-29 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D3790_15690 02a5763010d1cde8557a6b422c7c3eee 542 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 439 515 1.9E-16 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D3790_15690 02a5763010d1cde8557a6b422c7c3eee 542 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 190 287 1.9E-28 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D3790_15690 02a5763010d1cde8557a6b422c7c3eee 542 Gene3D G3DSA:3.40.50.720 8 192 8.2E-64 T 01-11-2018 D3790_15690 02a5763010d1cde8557a6b422c7c3eee 542 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 10 186 7.3E-58 T 01-11-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D3790_15690 02a5763010d1cde8557a6b422c7c3eee 542 SUPERFAMILY SSF48179 439 517 1.79E-17 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D3790_15690 02a5763010d1cde8557a6b422c7c3eee 542 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 187 212 - T 01-11-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D3790_15690 02a5763010d1cde8557a6b422c7c3eee 542 SUPERFAMILY SSF51735 9 189 2.23E-49 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 519 555 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 Pfam PF00202 Aminotransferase class-III 323 676 1.7E-43 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 SUPERFAMILY SSF47336 6 82 1.16E-8 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 Gene3D G3DSA:3.90.1150.10 286 699 7.0E-108 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 SUPERFAMILY SSF53383 289 705 1.14E-79 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1807 1822 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 Gene3D G3DSA:3.40.50.12780 1210 1648 4.2E-97 T 01-11-2018 D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 Gene3D G3DSA:3.30.559.30 926 1180 3.1E-54 T 01-11-2018 D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 Gene3D G3DSA:1.10.1200.10 2 82 1.8E-7 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 Gene3D G3DSA:1.10.1200.10 1786 1852 5.2E-11 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 Gene3D G3DSA:3.30.300.30 1650 1764 1.6E-19 T 01-11-2018 D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 Pfam PF00550 Phosphopantetheine attachment site 1799 1848 1.7E-11 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 Pfam PF00550 Phosphopantetheine attachment site 23 75 9.5E-7 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 Pfam PF00668 Condensation domain 756 1179 8.3E-43 T 01-11-2018 IPR001242 Condensation domain D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 SUPERFAMILY SSF52777 934 1184 1.67E-31 T 01-11-2018 D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 Gene3D G3DSA:3.30.559.10 742 1123 3.1E-54 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 Gene3D G3DSA:3.40.640.10 357 619 7.0E-108 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 SUPERFAMILY SSF47336 1795 1864 1.57E-13 T 01-11-2018 IPR036736 ACP-like superfamily D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 Pfam PF00501 AMP-binding enzyme 1218 1656 1.5E-72 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 SUPERFAMILY SSF52777 742 924 6.45E-17 T 01-11-2018 D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 SUPERFAMILY SSF56801 1212 1754 6.8E-112 T 01-11-2018 D3790_07405 b0e96e2d9cb95eb6b06f37e9603cf8a3 1892 Pfam PF13193 AMP-binding enzyme C-terminal domain 1665 1747 1.7E-5 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_04445 12d6201c36f28899b9a02d32d58859a5 258 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 16 232 2.8E-42 T 01-11-2018 D3790_04445 12d6201c36f28899b9a02d32d58859a5 258 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 10 250 28.578 T 01-11-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 D3790_10755 a015b282be2af14c8c0706082a3c66ef 203 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 16 196 1.7E-49 T 01-11-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase D3790_10755 a015b282be2af14c8c0706082a3c66ef 203 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 15 196 2.6E-58 T 01-11-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase D3790_10755 a015b282be2af14c8c0706082a3c66ef 203 Gene3D G3DSA:3.40.50.10420 9 201 1.2E-60 T 01-11-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily D3790_10755 a015b282be2af14c8c0706082a3c66ef 203 PIRSF PIRSF006806 12 199 2.7E-43 T 01-11-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase D3790_10755 a015b282be2af14c8c0706082a3c66ef 203 SUPERFAMILY SSF100950 15 202 2.51E-58 T 01-11-2018 IPR037171 NagB/RpiA transferase-like D3790_03115 cd124a1d75666b20b3c9e6cd773b1519 336 SUPERFAMILY SSF81345 5 323 2.48E-70 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_03115 cd124a1d75666b20b3c9e6cd773b1519 336 Pfam PF01032 FecCD transport family 21 325 3.4E-82 T 01-11-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 D3790_03115 cd124a1d75666b20b3c9e6cd773b1519 336 Gene3D G3DSA:1.10.3470.10 8 333 8.7E-86 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_18870 e369834c22821e5f9608baaee76206d2 299 Pfam PF13612 Transposase DDE domain 109 254 9.6E-28 T 01-11-2018 IPR025668 Transposase DDE domain D3790_03780 e369834c22821e5f9608baaee76206d2 299 Pfam PF13612 Transposase DDE domain 109 254 9.6E-28 T 01-11-2018 IPR025668 Transposase DDE domain D3790_17110 e369834c22821e5f9608baaee76206d2 299 Pfam PF13612 Transposase DDE domain 109 254 9.6E-28 T 01-11-2018 IPR025668 Transposase DDE domain D3790_11130 e369834c22821e5f9608baaee76206d2 299 Pfam PF13612 Transposase DDE domain 109 254 9.6E-28 T 01-11-2018 IPR025668 Transposase DDE domain D3790_02820 e369834c22821e5f9608baaee76206d2 299 Pfam PF13612 Transposase DDE domain 109 254 9.6E-28 T 01-11-2018 IPR025668 Transposase DDE domain D3790_00300 e369834c22821e5f9608baaee76206d2 299 Pfam PF13612 Transposase DDE domain 109 254 9.6E-28 T 01-11-2018 IPR025668 Transposase DDE domain D3790_02525 e369834c22821e5f9608baaee76206d2 299 Pfam PF13612 Transposase DDE domain 109 254 9.6E-28 T 01-11-2018 IPR025668 Transposase DDE domain D3790_11815 e369834c22821e5f9608baaee76206d2 299 Pfam PF13612 Transposase DDE domain 109 254 9.6E-28 T 01-11-2018 IPR025668 Transposase DDE domain D3790_09660 e369834c22821e5f9608baaee76206d2 299 Pfam PF13612 Transposase DDE domain 109 254 9.6E-28 T 01-11-2018 IPR025668 Transposase DDE domain D3790_01570 e369834c22821e5f9608baaee76206d2 299 Pfam PF13612 Transposase DDE domain 109 254 9.6E-28 T 01-11-2018 IPR025668 Transposase DDE domain D3790_08775 e369834c22821e5f9608baaee76206d2 299 Pfam PF13612 Transposase DDE domain 109 254 9.6E-28 T 01-11-2018 IPR025668 Transposase DDE domain D3790_12315 e369834c22821e5f9608baaee76206d2 299 Pfam PF13612 Transposase DDE domain 109 254 9.6E-28 T 01-11-2018 IPR025668 Transposase DDE domain D3790_02340 3d6f1a83827de79680404a7de961f1c2 244 SUPERFAMILY SSF75217 4 166 4.71E-39 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases D3790_02340 3d6f1a83827de79680404a7de961f1c2 244 Gene3D G3DSA:3.40.1280.10 1 164 9.6E-65 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D3790_02340 3d6f1a83827de79680404a7de961f1c2 244 PIRSF PIRSF004808 1 244 4.3E-76 T 01-11-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 D3790_02340 3d6f1a83827de79680404a7de961f1c2 244 Pfam PF00588 SpoU rRNA Methylase family 5 154 3.2E-34 T 01-11-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 D3790_02340 3d6f1a83827de79680404a7de961f1c2 244 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 241 3.3E-87 T 01-11-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 D3790_02340 3d6f1a83827de79680404a7de961f1c2 244 Gene3D G3DSA:1.10.8.590 168 244 2.1E-29 T 01-11-2018 D3790_18770 0056992f3d0d1c52cd6fb54e59fdd4ac 1084 Gene3D G3DSA:3.40.50.300 310 524 2.6E-22 T 01-11-2018 D3790_18770 0056992f3d0d1c52cd6fb54e59fdd4ac 1084 Pfam PF04851 Type III restriction enzyme, res subunit 310 471 2.0E-13 T 01-11-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 D3790_18770 0056992f3d0d1c52cd6fb54e59fdd4ac 1084 Gene3D G3DSA:3.40.50.300 540 783 3.2E-20 T 01-11-2018 D3790_18770 0056992f3d0d1c52cd6fb54e59fdd4ac 1084 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 129 237 2.2E-11 T 01-11-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 D3790_18770 0056992f3d0d1c52cd6fb54e59fdd4ac 1084 SMART SM00487 306 540 7.5E-9 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_18770 0056992f3d0d1c52cd6fb54e59fdd4ac 1084 Gene3D G3DSA:3.90.1570.50 127 213 4.1E-5 T 01-11-2018 D3790_18770 0056992f3d0d1c52cd6fb54e59fdd4ac 1084 SUPERFAMILY SSF52540 269 567 7.63E-20 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_08405 b1b14220c80d1e34b06a256f80b8322a 298 Pfam PF00950 ABC 3 transport family 13 268 4.9E-93 T 01-11-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 D3790_08405 b1b14220c80d1e34b06a256f80b8322a 298 Gene3D G3DSA:1.10.3470.10 41 273 2.9E-9 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_08405 b1b14220c80d1e34b06a256f80b8322a 298 SUPERFAMILY SSF81345 6 265 5.49E-46 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_13315 80fa097f0c81a209ad1aa72f153e641b 239 SUPERFAMILY SSF52172 1 121 8.11E-32 T 01-11-2018 IPR011006 CheY-like superfamily D3790_13315 80fa097f0c81a209ad1aa72f153e641b 239 Gene3D G3DSA:3.40.50.2300 1 122 7.1E-31 T 01-11-2018 D3790_13315 80fa097f0c81a209ad1aa72f153e641b 239 SMART SM00850 142 237 2.3E-23 T 01-11-2018 IPR007492 LytTR DNA-binding domain GO:0003677 D3790_13315 80fa097f0c81a209ad1aa72f153e641b 239 SMART SM00448 1 111 3.7E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_13315 80fa097f0c81a209ad1aa72f153e641b 239 Pfam PF04397 LytTr DNA-binding domain 143 236 9.8E-23 T 01-11-2018 IPR007492 LytTR DNA-binding domain GO:0003677 D3790_13315 80fa097f0c81a209ad1aa72f153e641b 239 Gene3D G3DSA:2.40.50.1020 129 238 2.2E-11 T 01-11-2018 D3790_13315 80fa097f0c81a209ad1aa72f153e641b 239 Pfam PF00072 Response regulator receiver domain 3 111 1.1E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_14975 db32dc82685d396f9afd6e7b57e4d5e3 356 SUPERFAMILY SSF53756 1 355 1.08E-104 T 01-11-2018 D3790_14975 db32dc82685d396f9afd6e7b57e4d5e3 356 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 3 354 2.2E-94 T 01-11-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 D3790_14975 db32dc82685d396f9afd6e7b57e4d5e3 356 Gene3D G3DSA:3.40.50.2000 188 339 3.8E-116 T 01-11-2018 D3790_14975 db32dc82685d396f9afd6e7b57e4d5e3 356 Gene3D G3DSA:3.40.50.2000 7 349 3.8E-116 T 01-11-2018 D3790_14975 db32dc82685d396f9afd6e7b57e4d5e3 356 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 24 352 5.5E-111 T 01-11-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 D3790_01025 c8d533e77a37d0f2430adf85ce3927fa 264 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 10 259 34.708 T 01-11-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 D3790_01025 c8d533e77a37d0f2430adf85ce3927fa 264 PIRSF PIRSF009437 3 262 1.4E-93 T 01-11-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 D3790_01025 c8d533e77a37d0f2430adf85ce3927fa 264 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 9 255 1.8E-86 T 01-11-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 D3790_01025 c8d533e77a37d0f2430adf85ce3927fa 264 Pfam PF04205 FMN-binding domain 150 244 8.4E-13 T 01-11-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 D3790_01025 c8d533e77a37d0f2430adf85ce3927fa 264 SMART SM00900 150 247 4.9E-26 T 01-11-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 D3790_11465 9d0ca483e59b3f738f02c034d9c0a304 109 SUPERFAMILY SSF82607 11 103 1.31E-36 T 01-11-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily D3790_11465 9d0ca483e59b3f738f02c034d9c0a304 109 PIRSF PIRSF004555 3 109 6.4E-40 T 01-11-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family D3790_11465 9d0ca483e59b3f738f02c034d9c0a304 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.624 T 01-11-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family D3790_11465 9d0ca483e59b3f738f02c034d9c0a304 109 Gene3D G3DSA:3.30.1310.10 1 109 2.0E-48 T 01-11-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily D3790_11465 9d0ca483e59b3f738f02c034d9c0a304 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 2.1E-42 T 01-11-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family D3790_11465 9d0ca483e59b3f738f02c034d9c0a304 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 99 2.4E-35 T 01-11-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family D3790_14105 84b776ba6e9d5be7e4812a2be5a2786b 437 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 426 2.0E-72 T 01-11-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 D3790_14105 84b776ba6e9d5be7e4812a2be5a2786b 437 SUPERFAMILY SSF48013 6 149 7.19E-34 T 01-11-2018 IPR035926 NusB-like superfamily D3790_14105 84b776ba6e9d5be7e4812a2be5a2786b 437 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 01-11-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 D3790_14105 84b776ba6e9d5be7e4812a2be5a2786b 437 Gene3D G3DSA:3.40.50.150 231 429 2.6E-69 T 01-11-2018 D3790_14105 84b776ba6e9d5be7e4812a2be5a2786b 437 SUPERFAMILY SSF53335 142 428 1.34E-75 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_14105 84b776ba6e9d5be7e4812a2be5a2786b 437 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 429 68.28 T 01-11-2018 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 D3790_14105 84b776ba6e9d5be7e4812a2be5a2786b 437 Pfam PF01029 NusB family 6 127 5.1E-23 T 01-11-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 D3790_14105 84b776ba6e9d5be7e4812a2be5a2786b 437 Gene3D G3DSA:3.30.70.1170 173 230 5.3E-24 T 01-11-2018 D3790_14105 84b776ba6e9d5be7e4812a2be5a2786b 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 2.6E-30 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase D3790_14105 84b776ba6e9d5be7e4812a2be5a2786b 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 428 2.6E-30 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase D3790_14105 84b776ba6e9d5be7e4812a2be5a2786b 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 2.6E-30 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase D3790_14105 84b776ba6e9d5be7e4812a2be5a2786b 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 2.6E-30 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase D3790_14105 84b776ba6e9d5be7e4812a2be5a2786b 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 2.6E-30 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase D3790_14105 84b776ba6e9d5be7e4812a2be5a2786b 437 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 428 3.5E-171 T 01-11-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 D3790_14105 84b776ba6e9d5be7e4812a2be5a2786b 437 Gene3D G3DSA:1.10.940.10 1 145 2.5E-46 T 01-11-2018 IPR035926 NusB-like superfamily D3790_14105 84b776ba6e9d5be7e4812a2be5a2786b 437 Gene3D G3DSA:1.10.287.730 146 172 2.0E-10 T 01-11-2018 D3790_13730 78c6ab8e9fbf1bd2cb2cd4aa67cc312b 465 Gene3D G3DSA:1.20.1250.20 30 464 8.8E-66 T 01-11-2018 D3790_13730 78c6ab8e9fbf1bd2cb2cd4aa67cc312b 465 Pfam PF00083 Sugar (and other) transporter 78 462 1.4E-31 T 01-11-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 D3790_13730 78c6ab8e9fbf1bd2cb2cd4aa67cc312b 465 SUPERFAMILY SSF103473 21 459 2.88E-65 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_13730 78c6ab8e9fbf1bd2cb2cd4aa67cc312b 465 ProSitePatterns PS00217 Sugar transport proteins signature 2. 144 169 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 D3790_06705 08b40f26da941fde3d2c38f11613617c 103 Pfam PF06649 Protein of unknown function (DUF1161) 29 85 1.9E-22 T 01-11-2018 IPR010595 Protein of unknown function DUF1161 D3790_06705 08b40f26da941fde3d2c38f11613617c 103 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 3 85 1.0E-17 T 01-11-2018 IPR010595 Protein of unknown function DUF1161 D3790_15710 486bee3826bb88f76128c2a1c1fbfc5f 167 SUPERFAMILY SSF117916 14 106 1.05E-20 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily D3790_15710 486bee3826bb88f76128c2a1c1fbfc5f 167 Gene3D G3DSA:3.30.300.130 7 106 9.4E-23 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily D3790_15710 486bee3826bb88f76128c2a1c1fbfc5f 167 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 23 167 1.6E-58 T 01-11-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit D3790_15710 486bee3826bb88f76128c2a1c1fbfc5f 167 Pfam PF01883 Iron-sulfur cluster assembly protein 15 75 1.3E-8 T 01-11-2018 IPR002744 MIP18 family-like D3790_16810 e0a267718fff2307f2e2a42638e8048f 254 Gene3D G3DSA:1.10.287.460 25 139 3.3E-26 T 01-11-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 D3790_16810 e0a267718fff2307f2e2a42638e8048f 254 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 245 9.3E-27 T 01-11-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D3790_16810 e0a267718fff2307f2e2a42638e8048f 254 Gene3D G3DSA:3.10.50.40 140 253 5.9E-41 T 01-11-2018 D3790_16810 e0a267718fff2307f2e2a42638e8048f 254 SUPERFAMILY SSF54534 40 248 7.29E-60 T 01-11-2018 D3790_16810 e0a267718fff2307f2e2a42638e8048f 254 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 32 151 2.2E-32 T 01-11-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 D3790_09950 ccce72716a5ae6b5dc021232e2d9d745 1156 Pfam PF09397 Ftsk gamma domain 1090 1150 7.8E-27 T 01-11-2018 IPR018541 FtsK gamma domain D3790_09950 ccce72716a5ae6b5dc021232e2d9d745 1156 SUPERFAMILY SSF52540 748 1060 1.14E-52 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09950 ccce72716a5ae6b5dc021232e2d9d745 1156 SUPERFAMILY SSF46785 1088 1153 2.72E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_09950 ccce72716a5ae6b5dc021232e2d9d745 1156 Gene3D G3DSA:3.30.980.40 666 770 2.0E-34 T 01-11-2018 D3790_09950 ccce72716a5ae6b5dc021232e2d9d745 1156 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 57 228 3.4E-46 T 01-11-2018 IPR025199 DNA translocase FtsK, 4TM region D3790_09950 ccce72716a5ae6b5dc021232e2d9d745 1156 Pfam PF01580 FtsK/SpoIIIE family 774 987 2.8E-75 T 01-11-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 D3790_09950 ccce72716a5ae6b5dc021232e2d9d745 1156 Gene3D G3DSA:3.40.50.300 771 1073 2.2E-124 T 01-11-2018 D3790_09950 ccce72716a5ae6b5dc021232e2d9d745 1156 Gene3D G3DSA:1.10.10.10 1092 1155 1.8E-29 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_09950 ccce72716a5ae6b5dc021232e2d9d745 1156 SMART SM00843 1088 1153 1.3E-40 T 01-11-2018 IPR018541 FtsK gamma domain D3790_00575 b8ccff0acffcc6470683175fc9a44393 94 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 6 91 4.1E-35 T 01-11-2018 IPR014057 Uncharacterized protein HI1420 D3790_00575 b8ccff0acffcc6470683175fc9a44393 94 Pfam PF01381 Helix-turn-helix 47 89 1.4E-9 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_00575 b8ccff0acffcc6470683175fc9a44393 94 SMART SM00530 39 92 0.0015 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_00575 b8ccff0acffcc6470683175fc9a44393 94 Gene3D G3DSA:1.10.260.40 28 90 1.3E-6 T 01-11-2018 D3790_00575 b8ccff0acffcc6470683175fc9a44393 94 SUPERFAMILY SSF47413 29 89 1.55E-11 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_01900 6e6cd7807073a55133c011fc5604f510 231 SMART SM00421 153 210 5.2E-4 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_01900 6e6cd7807073a55133c011fc5604f510 231 Pfam PF08448 PAS fold 20 125 8.5E-6 T 01-11-2018 IPR013656 PAS fold-4 D3790_01900 6e6cd7807073a55133c011fc5604f510 231 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 205 2.0E-9 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_01900 6e6cd7807073a55133c011fc5604f510 231 Gene3D G3DSA:3.30.450.20 3 128 4.9E-5 T 01-11-2018 D3790_01900 6e6cd7807073a55133c011fc5604f510 231 Gene3D G3DSA:1.10.10.10 144 214 2.2E-11 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_01900 6e6cd7807073a55133c011fc5604f510 231 SUPERFAMILY SSF46894 142 212 1.19E-13 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D3790_07275 6cd2d6c2b60ef414d0c100fcd21b6780 563 Gene3D G3DSA:3.30.300.310 457 558 1.8E-30 T 01-11-2018 D3790_07275 6cd2d6c2b60ef414d0c100fcd21b6780 563 Gene3D G3DSA:3.40.50.12780 13 456 2.0E-116 T 01-11-2018 D3790_07275 6cd2d6c2b60ef414d0c100fcd21b6780 563 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 5.1E-18 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_07275 6cd2d6c2b60ef414d0c100fcd21b6780 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_07275 6cd2d6c2b60ef414d0c100fcd21b6780 563 Pfam PF00501 AMP-binding enzyme 29 460 5.9E-110 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07275 6cd2d6c2b60ef414d0c100fcd21b6780 563 SUPERFAMILY SSF56801 18 553 4.19E-149 T 01-11-2018 D3790_09860 2359828049639466985ade2c1e3b63c4 781 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 143 745 3.4E-169 T 01-11-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 D3790_09860 2359828049639466985ade2c1e3b63c4 781 Pfam PF00753 Metallo-beta-lactamase superfamily 533 706 9.4E-15 T 01-11-2018 IPR001279 Metallo-beta-lactamase D3790_09860 2359828049639466985ade2c1e3b63c4 781 Pfam PF03772 Competence protein 230 498 4.0E-50 T 01-11-2018 IPR004477 ComEC/Rec2-related protein D3790_09860 2359828049639466985ade2c1e3b63c4 781 SUPERFAMILY SSF56281 525 769 4.74E-42 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3790_09860 2359828049639466985ade2c1e3b63c4 781 SMART SM00849 535 716 1.3E-10 T 01-11-2018 IPR001279 Metallo-beta-lactamase D3790_09860 2359828049639466985ade2c1e3b63c4 781 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 251 434 5.4E-37 T 01-11-2018 IPR004477 ComEC/Rec2-related protein D3790_09860 2359828049639466985ade2c1e3b63c4 781 Gene3D G3DSA:3.60.15.10 524 757 3.5E-42 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3790_09860 2359828049639466985ade2c1e3b63c4 781 Pfam PF13567 Domain of unknown function (DUF4131) 53 183 1.5E-8 T 01-11-2018 IPR025405 Domain of unknown function DUF4131 D3790_11925 625284372df18cb1f804f244b8ccf794 359 SUPERFAMILY SSF111337 1 348 1.83E-136 T 01-11-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 D3790_11925 625284372df18cb1f804f244b8ccf794 359 Gene3D G3DSA:3.40.1780.10 14 348 2.0E-116 T 01-11-2018 D3790_11925 625284372df18cb1f804f244b8ccf794 359 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 349 46.972 T 01-11-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 D3790_11925 625284372df18cb1f804f244b8ccf794 359 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 349 2.3E-161 T 01-11-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 D3790_11925 625284372df18cb1f804f244b8ccf794 359 Gene3D G3DSA:2.40.10.240 64 168 2.0E-116 T 01-11-2018 D3790_11925 625284372df18cb1f804f244b8ccf794 359 Pfam PF02547 Queuosine biosynthesis protein 4 348 5.3E-132 T 01-11-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 D3790_03520 7f185a515a4650baf22fbb557c0f3335 451 Gene3D G3DSA:2.40.50.100 303 339 1.4E-14 T 01-11-2018 D3790_03520 7f185a515a4650baf22fbb557c0f3335 451 Pfam PF13437 HlyD family secretion protein 303 413 2.2E-19 T 01-11-2018 D3790_03520 7f185a515a4650baf22fbb557c0f3335 451 Gene3D G3DSA:2.40.30.170 340 428 1.4E-14 T 01-11-2018 D3790_03520 7f185a515a4650baf22fbb557c0f3335 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 46 69 1.0E-53 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D3790_03520 7f185a515a4650baf22fbb557c0f3335 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 415 430 1.0E-53 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D3790_03520 7f185a515a4650baf22fbb557c0f3335 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 315 336 1.0E-53 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D3790_03520 7f185a515a4650baf22fbb557c0f3335 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 348 372 1.0E-53 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D3790_03520 7f185a515a4650baf22fbb557c0f3335 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 430 450 1.0E-53 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D3790_03520 7f185a515a4650baf22fbb557c0f3335 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 88 108 1.0E-53 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D3790_03520 7f185a515a4650baf22fbb557c0f3335 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 372 395 1.0E-53 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D3790_03520 7f185a515a4650baf22fbb557c0f3335 451 Gene3D G3DSA:1.10.287.470 208 295 1.4E-14 T 01-11-2018 D3790_03520 7f185a515a4650baf22fbb557c0f3335 451 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 35 451 3.9E-116 T 01-11-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 D3790_09485 bd76499b3ba371489e009d86602710ca 398 Gene3D G3DSA:2.60.98.20 144 280 3.3E-34 T 01-11-2018 IPR037058 Flagellar hook protein FlgE superfamily D3790_09485 bd76499b3ba371489e009d86602710ca 398 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 01-11-2018 IPR019776 Flagellar basal body rod protein, conserved site D3790_09485 bd76499b3ba371489e009d86602710ca 398 Pfam PF00460 Flagella basal body rod protein 4 33 1.3E-9 T 01-11-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 D3790_09485 bd76499b3ba371489e009d86602710ca 398 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 320 397 2.8E-19 T 01-11-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D3790_09485 bd76499b3ba371489e009d86602710ca 398 SUPERFAMILY SSF117143 73 359 3.53E-79 T 01-11-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like D3790_09485 bd76499b3ba371489e009d86602710ca 398 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 380 8.0E-92 T 01-11-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G D3790_09485 bd76499b3ba371489e009d86602710ca 398 Pfam PF07559 Flagellar basal body protein FlaE 170 279 8.4E-18 T 01-11-2018 IPR011491 Flagellar hook protein FlgE D3790_02490 4c1f91bc25ce74aa11d49e677ec24228 178 Pfam PF01202 Shikimate kinase 17 169 4.1E-10 T 01-11-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 D3790_02490 4c1f91bc25ce74aa11d49e677ec24228 178 Gene3D G3DSA:3.40.50.300 1 174 1.9E-58 T 01-11-2018 D3790_02490 4c1f91bc25ce74aa11d49e677ec24228 178 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 11 170 3.5E-64 T 01-11-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 D3790_02490 4c1f91bc25ce74aa11d49e677ec24228 178 SUPERFAMILY SSF52540 9 171 1.57E-23 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05970 c65aab5a9e60e32e54fd314338727ec7 480 SUPERFAMILY SSF51294 328 448 1.15E-15 T 01-11-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 D3790_05970 c65aab5a9e60e32e54fd314338727ec7 480 Pfam PF07591 Pretoxin HINT domain 339 445 4.2E-8 T 01-11-2018 D3790_05970 c65aab5a9e60e32e54fd314338727ec7 480 SMART SM00306 327 421 1.1E-7 T 01-11-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 D3790_05970 c65aab5a9e60e32e54fd314338727ec7 480 Gene3D G3DSA:2.170.16.10 329 467 6.3E-17 T 01-11-2018 D3790_19745 66d615ed354199c07ed5bfcb899fe866 246 Gene3D G3DSA:3.40.50.150 53 183 3.2E-8 T 01-11-2018 D3790_19745 66d615ed354199c07ed5bfcb899fe866 246 Pfam PF08241 Methyltransferase domain 77 125 1.8E-5 T 01-11-2018 IPR013216 Methyltransferase type 11 GO:0008168 D3790_19745 66d615ed354199c07ed5bfcb899fe866 246 SUPERFAMILY SSF53335 77 205 1.85E-10 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_00070 66d615ed354199c07ed5bfcb899fe866 246 Gene3D G3DSA:3.40.50.150 53 183 3.2E-8 T 01-11-2018 D3790_00070 66d615ed354199c07ed5bfcb899fe866 246 Pfam PF08241 Methyltransferase domain 77 125 1.8E-5 T 01-11-2018 IPR013216 Methyltransferase type 11 GO:0008168 D3790_00070 66d615ed354199c07ed5bfcb899fe866 246 SUPERFAMILY SSF53335 77 205 1.85E-10 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_04160 84908d6227a85ed1f94f594f7fdc1151 194 Gene3D G3DSA:3.40.50.1950 2 193 6.3E-77 T 01-11-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 D3790_04160 84908d6227a85ed1f94f594f7fdc1151 194 Pfam PF02441 Flavoprotein 2 165 1.0E-21 T 01-11-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 D3790_04160 84908d6227a85ed1f94f594f7fdc1151 194 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 36.723 T 01-11-2018 IPR004507 Flavin prenyltransferase UbiX-like D3790_04160 84908d6227a85ed1f94f594f7fdc1151 194 SUPERFAMILY SSF52507 2 188 8.5E-58 T 01-11-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 D3790_04160 84908d6227a85ed1f94f594f7fdc1151 194 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 2.2E-71 T 01-11-2018 IPR004507 Flavin prenyltransferase UbiX-like D3790_09430 f962e539093f7c9dc42b62575d77c8e0 308 Gene3D G3DSA:3.40.50.1110 10 271 2.4E-9 T 01-11-2018 IPR036514 SGNH hydrolase superfamily D3790_09430 f962e539093f7c9dc42b62575d77c8e0 308 SUPERFAMILY SSF52266 23 302 7.51E-18 T 01-11-2018 D3790_02495 de71232b7127ad8998f70d7e49a83e6e 445 Pfam PF02447 GntP family permease 5 441 1.2E-154 T 01-11-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 D3790_02495 de71232b7127ad8998f70d7e49a83e6e 445 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 4 444 5.1E-161 T 01-11-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 D3790_02495 de71232b7127ad8998f70d7e49a83e6e 445 PIRSF PIRSF002746 1 445 2.1E-149 T 01-11-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 D3790_15810 b17e63ddf54e38fc450a50875bbaf734 290 SUPERFAMILY SSF118352 226 282 1.57E-18 T 01-11-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 D3790_15810 b17e63ddf54e38fc450a50875bbaf734 290 SUPERFAMILY SSF64397 4 233 3.79E-78 T 01-11-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 D3790_15810 b17e63ddf54e38fc450a50875bbaf734 290 PIRSF PIRSF005261 1 286 5.5E-73 T 01-11-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 D3790_15810 b17e63ddf54e38fc450a50875bbaf734 290 Gene3D G3DSA:1.10.287.480 178 226 1.3E-20 T 01-11-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily D3790_15810 b17e63ddf54e38fc450a50875bbaf734 290 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 285 32.94 T 01-11-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 D3790_15810 b17e63ddf54e38fc450a50875bbaf734 290 Pfam PF01430 Hsp33 protein 5 273 1.1E-88 T 01-11-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 D3790_15810 b17e63ddf54e38fc450a50875bbaf734 290 Gene3D G3DSA:3.90.1280.10 227 284 5.0E-22 T 01-11-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 D3790_15810 b17e63ddf54e38fc450a50875bbaf734 290 Gene3D G3DSA:3.55.30.10 1 176 1.3E-66 T 01-11-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 D3790_03850 208407302cf8c8db627042bc6ebd4abb 346 Gene3D G3DSA:3.20.20.70 4 315 4.5E-136 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_03850 208407302cf8c8db627042bc6ebd4abb 346 SMART SM00876 220 312 6.5E-50 T 01-11-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 D3790_03850 208407302cf8c8db627042bc6ebd4abb 346 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.805 T 01-11-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 D3790_03850 208407302cf8c8db627042bc6ebd4abb 346 SMART SM00729 43 255 4.6E-42 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D3790_03850 208407302cf8c8db627042bc6ebd4abb 346 PIRSF PIRSF001619 1 318 2.2E-140 T 01-11-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 D3790_03850 208407302cf8c8db627042bc6ebd4abb 346 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 8.3E-21 T 01-11-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 D3790_03850 208407302cf8c8db627042bc6ebd4abb 346 Pfam PF04055 Radical SAM superfamily 50 203 1.5E-16 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D3790_03850 208407302cf8c8db627042bc6ebd4abb 346 SUPERFAMILY SSF102114 5 313 1.31E-94 T 01-11-2018 D3790_03850 208407302cf8c8db627042bc6ebd4abb 346 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 6.5E-127 T 01-11-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 D3790_14800 fdff1faf8b6c928717827b9e9f1100a3 367 Gene3D G3DSA:3.40.50.2000 4 192 2.8E-10 T 01-11-2018 D3790_14800 fdff1faf8b6c928717827b9e9f1100a3 367 Pfam PF00534 Glycosyl transferases group 1 196 344 4.8E-22 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 D3790_14800 fdff1faf8b6c928717827b9e9f1100a3 367 Gene3D G3DSA:3.40.50.2000 193 353 4.3E-27 T 01-11-2018 D3790_14800 fdff1faf8b6c928717827b9e9f1100a3 367 Pfam PF13439 Glycosyltransferase Family 4 15 186 5.3E-11 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D3790_14800 fdff1faf8b6c928717827b9e9f1100a3 367 SUPERFAMILY SSF53756 5 366 8.37E-50 T 01-11-2018 D3790_04525 c743718b6ee596ccac12a4b14bd27dba 42 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 1 37 4.3E-10 T 01-11-2018 D3790_04525 c743718b6ee596ccac12a4b14bd27dba 42 SUPERFAMILY SSF51735 1 37 1.93E-11 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_04525 c743718b6ee596ccac12a4b14bd27dba 42 Gene3D G3DSA:3.40.50.720 1 40 3.8E-11 T 01-11-2018 D3790_05635 474773732d32db13f13825af7defe7e4 465 Pfam PF04317 YcjX-like family, DUF463 20 464 2.2E-187 T 01-11-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein D3790_05635 474773732d32db13f13825af7defe7e4 465 SUPERFAMILY SSF52540 12 93 4.81E-5 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05635 474773732d32db13f13825af7defe7e4 465 PIRSF PIRSF019381 1 465 1.4E-217 T 01-11-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein D3790_15220 e6b95569520ce4236cf887cf50169606 254 SUPERFAMILY SSF55729 8 172 5.22E-7 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_15220 e6b95569520ce4236cf887cf50169606 254 Gene3D G3DSA:3.40.630.30 7 212 9.5E-31 T 01-11-2018 D3790_10045 56a958d5d0f7ce20019f8ecca8f5aa20 89 Gene3D G3DSA:3.40.30.10 2 85 5.2E-25 T 01-11-2018 D3790_10045 56a958d5d0f7ce20019f8ecca8f5aa20 89 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 01-11-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 D3790_10045 56a958d5d0f7ce20019f8ecca8f5aa20 89 Pfam PF00462 Glutaredoxin 4 69 3.9E-17 T 01-11-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 D3790_10045 56a958d5d0f7ce20019f8ecca8f5aa20 89 PRINTS PR00160 Glutaredoxin signature 66 79 3.2E-12 T 01-11-2018 IPR014025 Glutaredoxin subgroup D3790_10045 56a958d5d0f7ce20019f8ecca8f5aa20 89 PRINTS PR00160 Glutaredoxin signature 3 21 3.2E-12 T 01-11-2018 IPR014025 Glutaredoxin subgroup D3790_10045 56a958d5d0f7ce20019f8ecca8f5aa20 89 PRINTS PR00160 Glutaredoxin signature 52 65 3.2E-12 T 01-11-2018 IPR014025 Glutaredoxin subgroup D3790_10045 56a958d5d0f7ce20019f8ecca8f5aa20 89 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 2.0E-49 T 01-11-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 D3790_10045 56a958d5d0f7ce20019f8ecca8f5aa20 89 SUPERFAMILY SSF52833 4 81 1.49E-21 T 01-11-2018 IPR036249 Thioredoxin-like superfamily D3790_06975 1df0380ea56be21833adcc56d11dbbbe 86 Gene3D G3DSA:3.40.1620.10 3 48 2.5E-6 T 01-11-2018 D3790_06975 1df0380ea56be21833adcc56d11dbbbe 86 SUPERFAMILY SSF143120 1 76 2.88E-14 T 01-11-2018 IPR036165 YefM-like superfamily D3790_06975 1df0380ea56be21833adcc56d11dbbbe 86 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 50 2.7E-10 T 01-11-2018 D3790_06975 1df0380ea56be21833adcc56d11dbbbe 86 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 64 6.9E-14 T 01-11-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM D3790_10735 b2efd86dce77ed2f98f8f343daec1238 438 Gene3D G3DSA:3.40.350.10 1 171 8.8E-61 T 01-11-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal D3790_10735 b2efd86dce77ed2f98f8f343daec1238 438 Gene3D G3DSA:3.90.230.10 172 438 2.0E-104 T 01-11-2018 D3790_10735 b2efd86dce77ed2f98f8f343daec1238 438 PRINTS PR00599 Methionine aminopeptidase-1 signature 370 382 5.3E-6 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 D3790_10735 b2efd86dce77ed2f98f8f343daec1238 438 PRINTS PR00599 Methionine aminopeptidase-1 signature 253 269 5.3E-6 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 D3790_10735 b2efd86dce77ed2f98f8f343daec1238 438 SUPERFAMILY SSF53092 2 174 1.15E-50 T 01-11-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal D3790_10735 b2efd86dce77ed2f98f8f343daec1238 438 SUPERFAMILY SSF55920 175 434 1.19E-88 T 01-11-2018 IPR036005 Creatinase/aminopeptidase-like D3790_10735 b2efd86dce77ed2f98f8f343daec1238 438 Pfam PF00557 Metallopeptidase family M24 181 411 6.9E-67 T 01-11-2018 IPR000994 Peptidase M24 D3790_10735 b2efd86dce77ed2f98f8f343daec1238 438 SMART SM01011 1 136 4.4E-55 T 01-11-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 D3790_10735 b2efd86dce77ed2f98f8f343daec1238 438 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 348 360 - T 01-11-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site D3790_10735 b2efd86dce77ed2f98f8f343daec1238 438 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 123 1.1E-33 T 01-11-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 D3790_13720 6464fbcbcb39647aed64f97858ade0ad 88 Pfam PF05656 Protein of unknown function (DUF805) 1 82 6.2E-21 T 01-11-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 D3790_16935 56468f5bdde3f92d5d07e9df4242276d 426 Pfam PF00202 Aminotransferase class-III 42 414 5.7E-131 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_16935 56468f5bdde3f92d5d07e9df4242276d 426 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 28 418 1.1E-200 T 01-11-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 D3790_16935 56468f5bdde3f92d5d07e9df4242276d 426 SUPERFAMILY SSF53383 32 416 3.13E-125 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_16935 56468f5bdde3f92d5d07e9df4242276d 426 Gene3D G3DSA:3.90.1150.10 47 409 2.5E-152 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_16935 56468f5bdde3f92d5d07e9df4242276d 426 Gene3D G3DSA:3.40.640.10 76 321 2.5E-152 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_16935 56468f5bdde3f92d5d07e9df4242276d 426 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 33 416 2.1E-152 T 01-11-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 D3790_16935 56468f5bdde3f92d5d07e9df4242276d 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_16935 56468f5bdde3f92d5d07e9df4242276d 426 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 32 419 69.699 T 01-11-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 D3790_16935 56468f5bdde3f92d5d07e9df4242276d 426 PIRSF PIRSF000521 45 178 2.4E-9 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_16935 56468f5bdde3f92d5d07e9df4242276d 426 PIRSF PIRSF000521 189 419 3.7E-35 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_03455 f5266a21a3f83822fc6139aa413ef1d3 48 Gene3D G3DSA:3.30.70.1290 1 48 2.7E-9 T 01-11-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D3790_03455 f5266a21a3f83822fc6139aa413ef1d3 48 Pfam PF01797 Transposase IS200 like 2 47 1.0E-8 T 01-11-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D3790_03455 f5266a21a3f83822fc6139aa413ef1d3 48 SUPERFAMILY SSF143422 3 47 5.89E-9 T 01-11-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D3790_16965 395c2ae00e24980b63a72cf72bcf97b1 207 SUPERFAMILY SSF52833 22 184 1.07E-38 T 01-11-2018 IPR036249 Thioredoxin-like superfamily D3790_16965 395c2ae00e24980b63a72cf72bcf97b1 207 Pfam PF01323 DSBA-like thioredoxin domain 40 179 4.1E-20 T 01-11-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 D3790_16965 395c2ae00e24980b63a72cf72bcf97b1 207 PIRSF PIRSF001488 1 207 4.3E-76 T 01-11-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL D3790_16965 395c2ae00e24980b63a72cf72bcf97b1 207 Gene3D G3DSA:3.40.30.10 18 207 3.2E-48 T 01-11-2018 D3790_16965 395c2ae00e24980b63a72cf72bcf97b1 207 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 01-11-2018 IPR017937 Thioredoxin, conserved site GO:0045454 D3790_09545 2cf3c6b7619ade82b3daa52fdf78d719 383 Gene3D G3DSA:3.40.1690.10 217 359 3.8E-58 T 01-11-2018 IPR029025 Type III secretion system substrate exporter, C-terminal D3790_09545 2cf3c6b7619ade82b3daa52fdf78d719 383 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 347 3.6E-121 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 D3790_09545 2cf3c6b7619ade82b3daa52fdf78d719 383 SUPERFAMILY SSF160544 252 355 9.16E-40 T 01-11-2018 IPR029025 Type III secretion system substrate exporter, C-terminal D3790_09545 2cf3c6b7619ade82b3daa52fdf78d719 383 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 353 4.0E-128 T 01-11-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 D3790_09545 2cf3c6b7619ade82b3daa52fdf78d719 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 5.8E-41 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 D3790_09545 2cf3c6b7619ade82b3daa52fdf78d719 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 5.8E-41 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 D3790_09545 2cf3c6b7619ade82b3daa52fdf78d719 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 5.8E-41 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 D3790_09545 2cf3c6b7619ade82b3daa52fdf78d719 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 5.8E-41 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 D3790_09545 2cf3c6b7619ade82b3daa52fdf78d719 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 5.8E-41 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 D3790_00555 17bb885d38b1cdad15b8e9f9ecd4bc4c 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 20 53 5.3E-7 T 01-11-2018 D3790_00555 17bb885d38b1cdad15b8e9f9ecd4bc4c 84 SUPERFAMILY SSF143120 4 66 1.31E-10 T 01-11-2018 IPR036165 YefM-like superfamily D3790_00555 17bb885d38b1cdad15b8e9f9ecd4bc4c 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 5 62 3.2E-9 T 01-11-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM D3790_00555 17bb885d38b1cdad15b8e9f9ecd4bc4c 84 Gene3D G3DSA:3.40.1620.10 18 51 7.7E-7 T 01-11-2018 D3790_18815 ce4f0b3a768731c261cfafd5780210d8 129 Pfam PF13683 Integrase core domain 45 111 7.0E-9 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 D3790_18815 ce4f0b3a768731c261cfafd5780210d8 129 SUPERFAMILY SSF53098 33 117 1.23E-14 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_07370 e5316b2eba755394b8078c88a01e32ae 252 Pfam PF00005 ABC transporter 20 149 1.3E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_07370 e5316b2eba755394b8078c88a01e32ae 252 SMART SM00382 29 199 2.9E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_07370 e5316b2eba755394b8078c88a01e32ae 252 SUPERFAMILY SSF52540 3 225 2.62E-54 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_07370 e5316b2eba755394b8078c88a01e32ae 252 Gene3D G3DSA:3.40.50.300 1 239 1.7E-58 T 01-11-2018 D3790_05945 48a523eb5e46d5d3f43feb5022451a12 97 Pfam PF13358 DDE superfamily endonuclease 15 91 1.8E-9 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_14500 603e35e6f81696f67052cebd8cdb366e 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 381 1.4E-201 T 01-11-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 D3790_14500 603e35e6f81696f67052cebd8cdb366e 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 380 5.5E-143 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D3790_14500 603e35e6f81696f67052cebd8cdb366e 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D3790_14500 603e35e6f81696f67052cebd8cdb366e 386 Gene3D G3DSA:3.40.640.10 2 247 6.9E-85 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_14500 603e35e6f81696f67052cebd8cdb366e 386 SUPERFAMILY SSF53383 7 381 1.5E-119 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_14500 603e35e6f81696f67052cebd8cdb366e 386 Gene3D G3DSA:3.90.1150.10 248 385 7.3E-53 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_14500 603e35e6f81696f67052cebd8cdb366e 386 PIRSF PIRSF001434 3 384 1.1E-132 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D3790_07890 f1b43065a4bed3388bdc448f9aba3524 562 SUPERFAMILY SSF53383 66 544 1.17E-103 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_07890 f1b43065a4bed3388bdc448f9aba3524 562 Gene3D G3DSA:3.90.1150.170 65 538 1.0E-104 T 01-11-2018 D3790_07890 f1b43065a4bed3388bdc448f9aba3524 562 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 32 542 5.8E-232 T 01-11-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 D3790_07890 f1b43065a4bed3388bdc448f9aba3524 562 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 102 457 4.0E-48 T 01-11-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 D3790_07890 f1b43065a4bed3388bdc448f9aba3524 562 Gene3D G3DSA:3.40.640.10 137 402 1.0E-104 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_07890 f1b43065a4bed3388bdc448f9aba3524 562 ProSitePatterns PS00018 EF-hand calcium-binding domain. 260 272 - T 01-11-2018 IPR018247 EF-Hand 1, calcium-binding site D3790_06870 e88005c37392c49eb66ff4c01a7d5b86 513 Gene3D G3DSA:3.50.50.60 107 461 3.5E-60 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_06870 e88005c37392c49eb66ff4c01a7d5b86 513 SUPERFAMILY SSF51905 103 395 1.85E-35 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_06870 e88005c37392c49eb66ff4c01a7d5b86 513 Pfam PF01266 FAD dependent oxidoreductase 107 461 4.0E-44 T 01-11-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 D3790_06870 e88005c37392c49eb66ff4c01a7d5b86 513 Gene3D G3DSA:3.30.9.10 200 422 3.5E-60 T 01-11-2018 D3790_04640 3409abcf908c2c4ab7950fb86429f938 268 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 23 265 33.952 T 01-11-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 D3790_04640 3409abcf908c2c4ab7950fb86429f938 268 SUPERFAMILY SSF53474 24 264 3.88E-40 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_04640 3409abcf908c2c4ab7950fb86429f938 268 Gene3D G3DSA:3.40.50.1820 16 265 5.0E-57 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_04640 3409abcf908c2c4ab7950fb86429f938 268 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 27 264 5.3E-78 T 01-11-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 D3790_04640 3409abcf908c2c4ab7950fb86429f938 268 Pfam PF12697 Alpha/beta hydrolase family 29 254 2.0E-13 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_09855 9fcd03aeb40dc622b81c5e8d665a7720 582 SUPERFAMILY SSF90123 14 327 1.16E-73 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_09855 9fcd03aeb40dc622b81c5e8d665a7720 582 SMART SM00382 368 555 9.2E-19 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_09855 9fcd03aeb40dc622b81c5e8d665a7720 582 Pfam PF00005 ABC transporter 359 509 3.8E-34 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_09855 9fcd03aeb40dc622b81c5e8d665a7720 582 SUPERFAMILY SSF52540 331 580 1.81E-94 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09855 9fcd03aeb40dc622b81c5e8d665a7720 582 Gene3D G3DSA:1.20.1560.10 2 328 2.2E-80 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_09855 9fcd03aeb40dc622b81c5e8d665a7720 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 3.9E-259 T 01-11-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 D3790_09855 9fcd03aeb40dc622b81c5e8d665a7720 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_09855 9fcd03aeb40dc622b81c5e8d665a7720 582 Pfam PF00664 ABC transporter transmembrane region 28 297 8.2E-60 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D3790_09855 9fcd03aeb40dc622b81c5e8d665a7720 582 Gene3D G3DSA:3.40.50.300 329 581 7.9E-95 T 01-11-2018 D3790_05180 c44535a1f87bebbdac2e24c803beca37 261 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 01-11-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 D3790_05180 c44535a1f87bebbdac2e24c803beca37 261 Gene3D G3DSA:3.20.20.140 1 260 1.2E-101 T 01-11-2018 D3790_05180 c44535a1f87bebbdac2e24c803beca37 261 Pfam PF01026 TatD related DNase 4 255 5.4E-79 T 01-11-2018 IPR001130 TatD family GO:0016788 D3790_05180 c44535a1f87bebbdac2e24c803beca37 261 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 01-11-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 D3790_05180 c44535a1f87bebbdac2e24c803beca37 261 SUPERFAMILY SSF51556 1 257 1.98E-88 T 01-11-2018 IPR032466 Metal-dependent hydrolase D3790_05180 c44535a1f87bebbdac2e24c803beca37 261 PIRSF PIRSF005902 1 258 2.6E-77 T 01-11-2018 IPR001130 TatD family GO:0016788 D3790_05180 c44535a1f87bebbdac2e24c803beca37 261 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 01-11-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 D3790_05180 c44535a1f87bebbdac2e24c803beca37 261 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 255 2.4E-95 T 01-11-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 D3790_01615 b45bbe60444e79c69dcd942c788ec12e 107 Pfam PF01710 Transposase 1 103 2.4E-22 T 01-11-2018 IPR002622 Transposase, Synechocystis PCC 6803 D3790_11090 b45bbe60444e79c69dcd942c788ec12e 107 Pfam PF01710 Transposase 1 103 2.4E-22 T 01-11-2018 IPR002622 Transposase, Synechocystis PCC 6803 D3790_02025 b45bbe60444e79c69dcd942c788ec12e 107 Pfam PF01710 Transposase 1 103 2.4E-22 T 01-11-2018 IPR002622 Transposase, Synechocystis PCC 6803 D3790_12245 b45bbe60444e79c69dcd942c788ec12e 107 Pfam PF01710 Transposase 1 103 2.4E-22 T 01-11-2018 IPR002622 Transposase, Synechocystis PCC 6803 D3790_17085 b45bbe60444e79c69dcd942c788ec12e 107 Pfam PF01710 Transposase 1 103 2.4E-22 T 01-11-2018 IPR002622 Transposase, Synechocystis PCC 6803 D3790_00460 b45bbe60444e79c69dcd942c788ec12e 107 Pfam PF01710 Transposase 1 103 2.4E-22 T 01-11-2018 IPR002622 Transposase, Synechocystis PCC 6803 D3790_09210 b45bbe60444e79c69dcd942c788ec12e 107 Pfam PF01710 Transposase 1 103 2.4E-22 T 01-11-2018 IPR002622 Transposase, Synechocystis PCC 6803 D3790_12485 938a1faf1b2215955d22e628b79d305a 286 Gene3D G3DSA:3.50.50.60 105 175 4.9E-10 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_12485 938a1faf1b2215955d22e628b79d305a 286 Pfam PF13454 FAD-NAD(P)-binding 2 102 2.3E-10 T 01-11-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain D3790_12485 938a1faf1b2215955d22e628b79d305a 286 Gene3D G3DSA:3.50.50.60 62 104 4.9E-10 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_12485 938a1faf1b2215955d22e628b79d305a 286 SUPERFAMILY SSF51905 66 177 7.77E-7 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_08580 041b5b3d39d851dc0f770d618d1c4086 84 Pfam PF04221 RelB antitoxin 1 59 4.7E-15 T 01-11-2018 IPR007337 RelB antitoxin/Antitoxin DinJ D3790_08580 041b5b3d39d851dc0f770d618d1c4086 84 Gene3D G3DSA:1.10.1220.10 1 84 2.7E-32 T 01-11-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 D3790_08580 041b5b3d39d851dc0f770d618d1c4086 84 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 84 3.8E-25 T 01-11-2018 IPR007337 RelB antitoxin/Antitoxin DinJ D3790_03425 9777e39c3d4940633e38408489d60eec 237 SUPERFAMILY SSF51197 14 176 1.22E-18 T 01-11-2018 D3790_03425 9777e39c3d4940633e38408489d60eec 237 Gene3D G3DSA:2.60.120.620 12 233 2.1E-10 T 01-11-2018 D3790_01290 f3fb216809c4352cf3cd9fe7b1973d7a 398 SUPERFAMILY SSF116734 192 389 2.94E-30 T 01-11-2018 D3790_01290 f3fb216809c4352cf3cd9fe7b1973d7a 398 Gene3D G3DSA:3.90.220.20 2 189 1.4E-35 T 01-11-2018 D3790_01290 f3fb216809c4352cf3cd9fe7b1973d7a 398 Gene3D G3DSA:3.90.220.20 190 385 3.2E-32 T 01-11-2018 D3790_01290 f3fb216809c4352cf3cd9fe7b1973d7a 398 Pfam PF01420 Type I restriction modification DNA specificity domain 1 178 7.0E-20 T 01-11-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 D3790_01290 f3fb216809c4352cf3cd9fe7b1973d7a 398 SUPERFAMILY SSF116734 3 192 2.29E-37 T 01-11-2018 D3790_11730 a39a69ac44ed8df6ed29e53c9c849103 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 01-11-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 D3790_11730 a39a69ac44ed8df6ed29e53c9c849103 114 Gene3D G3DSA:2.60.300.12 9 114 2.1E-33 T 01-11-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D3790_11730 a39a69ac44ed8df6ed29e53c9c849103 114 SUPERFAMILY SSF89360 8 103 2.35E-30 T 01-11-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D3790_11730 a39a69ac44ed8df6ed29e53c9c849103 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 9.2E-20 T 01-11-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 D3790_11730 a39a69ac44ed8df6ed29e53c9c849103 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 36.475 T 01-11-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 D3790_11730 a39a69ac44ed8df6ed29e53c9c849103 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 114 2.6E-38 T 01-11-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 D3790_10330 cad172b36487d746cfbfb1b6b064e237 152 Pfam PF07484 Phage Tail Collar Domain 8 55 3.3E-15 T 01-11-2018 IPR011083 Phage tail collar domain D3790_10330 cad172b36487d746cfbfb1b6b064e237 152 SUPERFAMILY SSF88874 3 151 7.19E-43 T 01-11-2018 D3790_10330 cad172b36487d746cfbfb1b6b064e237 152 Gene3D G3DSA:3.90.1340.10 3 56 2.6E-24 T 01-11-2018 IPR037053 Phage tail collar domain superfamily D3790_05265 bb5e849490a7151fd1621f1a2cc188f8 478 Pfam PF08918 PhoQ Sensor 9 185 1.8E-79 T 01-11-2018 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 D3790_05265 bb5e849490a7151fd1621f1a2cc188f8 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 5.7E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_05265 bb5e849490a7151fd1621f1a2cc188f8 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 5.7E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_05265 bb5e849490a7151fd1621f1a2cc188f8 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 436 5.7E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_05265 bb5e849490a7151fd1621f1a2cc188f8 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 376 475 1.6E-13 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_05265 bb5e849490a7151fd1621f1a2cc188f8 478 SUPERFAMILY SSF47384 247 325 4.71E-5 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D3790_05265 bb5e849490a7151fd1621f1a2cc188f8 478 SUPERFAMILY SSF55874 341 475 2.62E-29 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_05265 bb5e849490a7151fd1621f1a2cc188f8 478 Gene3D G3DSA:1.10.287.130 213 321 7.2E-7 T 01-11-2018 D3790_05265 bb5e849490a7151fd1621f1a2cc188f8 478 Gene3D G3DSA:3.30.565.10 336 478 8.7E-32 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_05265 bb5e849490a7151fd1621f1a2cc188f8 478 Gene3D G3DSA:3.30.450.140 42 192 4.1E-52 T 01-11-2018 IPR038429 PhoQ Sensor superfamily D3790_05265 bb5e849490a7151fd1621f1a2cc188f8 478 SMART SM00387 373 478 9.4E-20 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_08130 cfdf56dcf53c11173a9cb19e6d022904 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 2.1E-23 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D3790_08130 cfdf56dcf53c11173a9cb19e6d022904 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 1.8E-66 T 01-11-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 D3790_08130 cfdf56dcf53c11173a9cb19e6d022904 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 01-11-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 D3790_08130 cfdf56dcf53c11173a9cb19e6d022904 135 SUPERFAMILY SSF54593 1 127 1.61E-33 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D3790_08130 cfdf56dcf53c11173a9cb19e6d022904 135 Gene3D G3DSA:3.10.180.10 1 133 5.0E-48 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D3790_08130 cfdf56dcf53c11173a9cb19e6d022904 135 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 01-11-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 D3790_09850 cf97c046d3dded4c73d3357d773cf326 331 SUPERFAMILY SSF52540 46 163 1.1E-14 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09850 cf97c046d3dded4c73d3357d773cf326 331 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 325 41.022 T 01-11-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 D3790_09850 cf97c046d3dded4c73d3357d773cf326 331 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 319 1.1E-115 T 01-11-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 D3790_09850 cf97c046d3dded4c73d3357d773cf326 331 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 320 2.7E-105 T 01-11-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 D3790_10120 108225b2e5c22046003b924cf24f735f 360 Pfam PF13847 Methyltransferase domain 72 188 1.3E-26 T 01-11-2018 IPR025714 Methyltransferase domain D3790_10120 108225b2e5c22046003b924cf24f735f 360 Gene3D G3DSA:3.40.50.150 39 268 1.2E-61 T 01-11-2018 D3790_10120 108225b2e5c22046003b924cf24f735f 360 SUPERFAMILY SSF53335 15 302 1.07E-42 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_10120 108225b2e5c22046003b924cf24f735f 360 Gene3D G3DSA:3.40.5.100 269 359 4.9E-31 T 01-11-2018 D3790_12615 a55e1a5fb0a03990ce9c1a9940e41072 411 PRINTS PR01035 Tetracycline resistance protein signature 153 175 9.5E-6 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 D3790_12615 a55e1a5fb0a03990ce9c1a9940e41072 411 PRINTS PR01035 Tetracycline resistance protein signature 38 54 9.5E-6 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 D3790_12615 a55e1a5fb0a03990ce9c1a9940e41072 411 PRINTS PR01035 Tetracycline resistance protein signature 181 201 9.5E-6 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 D3790_12615 a55e1a5fb0a03990ce9c1a9940e41072 411 PRINTS PR01035 Tetracycline resistance protein signature 294 315 9.5E-6 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 D3790_12615 a55e1a5fb0a03990ce9c1a9940e41072 411 ProSitePatterns PS00216 Sugar transport proteins signature 1. 82 98 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 D3790_12615 a55e1a5fb0a03990ce9c1a9940e41072 411 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 26 405 2.9E-78 T 01-11-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 D3790_12615 a55e1a5fb0a03990ce9c1a9940e41072 411 Gene3D G3DSA:1.20.1720.10 28 406 7.6E-91 T 01-11-2018 D3790_12615 a55e1a5fb0a03990ce9c1a9940e41072 411 Pfam PF07690 Major Facilitator Superfamily 34 373 3.2E-40 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_12615 a55e1a5fb0a03990ce9c1a9940e41072 411 SUPERFAMILY SSF103473 24 408 1.44E-59 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_04280 e61e4cba57c38fea7a77ad0192438175 454 PIRSF PIRSF006060 1 454 1.2E-75 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D3790_04280 e61e4cba57c38fea7a77ad0192438175 454 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 01-11-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 D3790_04280 e61e4cba57c38fea7a77ad0192438175 454 Gene3D G3DSA:1.20.1740.10 5 454 1.4E-65 T 01-11-2018 D3790_04280 e61e4cba57c38fea7a77ad0192438175 454 Pfam PF00324 Amino acid permease 15 450 1.3E-105 T 01-11-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 D3790_10105 60daa515cd0f0dde40dd4fec1bf6807c 245 Gene3D G3DSA:3.20.20.70 1 245 9.8E-92 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_10105 60daa515cd0f0dde40dd4fec1bf6807c 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 5.6E-79 T 01-11-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 D3790_10105 60daa515cd0f0dde40dd4fec1bf6807c 245 SUPERFAMILY SSF51366 1 244 9.42E-66 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D3790_10105 60daa515cd0f0dde40dd4fec1bf6807c 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.454 T 01-11-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 D3790_10105 60daa515cd0f0dde40dd4fec1bf6807c 245 Pfam PF00977 Histidine biosynthesis protein 1 234 1.2E-77 T 01-11-2018 IPR006062 Histidine biosynthesis GO:0000105 D3790_10685 a48efd415fc982f5b02c35c1b88bda84 487 Gene3D G3DSA:1.20.1600.10 32 482 3.2E-71 T 01-11-2018 D3790_10685 a48efd415fc982f5b02c35c1b88bda84 487 SUPERFAMILY SSF56954 1 479 1.57E-60 T 01-11-2018 D3790_10685 a48efd415fc982f5b02c35c1b88bda84 487 Pfam PF02321 Outer membrane efflux protein 52 270 2.0E-14 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D3790_10685 a48efd415fc982f5b02c35c1b88bda84 487 Pfam PF02321 Outer membrane efflux protein 294 475 1.0E-17 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D3790_15000 6909cbf04fa42bacb5240cf7dcb6294a 381 TIGRFAM TIGR03573 WbuX: N-acetyl sugar amidotransferase 7 341 6.1E-95 T 01-11-2018 IPR020022 N-acetyl sugar amidotransferase D3790_15000 6909cbf04fa42bacb5240cf7dcb6294a 381 Gene3D G3DSA:3.40.50.620 8 309 9.2E-19 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_15000 6909cbf04fa42bacb5240cf7dcb6294a 381 SUPERFAMILY SSF52402 52 315 2.12E-23 T 01-11-2018 D3790_01805 64729bd48d71405a945b89e85034d700 210 SUPERFAMILY SSF46689 93 139 5.02E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_01805 64729bd48d71405a945b89e85034d700 210 Pfam PF01527 Transposase 95 141 2.9E-12 T 01-11-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D3790_08525 b9a89c1290cf248b0e571808eedcdc43 189 ProSitePatterns PS01293 Nudix CoA signature. 44 64 - T 01-11-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918|Reactome: R-HSA-9033241 D3790_08525 b9a89c1290cf248b0e571808eedcdc43 189 SUPERFAMILY SSF55811 27 178 2.84E-30 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D3790_08525 b9a89c1290cf248b0e571808eedcdc43 189 Gene3D G3DSA:3.90.79.10 5 186 1.9E-48 T 01-11-2018 D3790_08525 b9a89c1290cf248b0e571808eedcdc43 189 Pfam PF00293 NUDIX domain 28 110 3.8E-12 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D3790_06420 f1ef892d7e60e9a953f9f2b927e8ac25 519 Pfam PF04715 Anthranilate synthase component I, N terminal region 20 191 8.5E-17 T 01-11-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D3790_06420 f1ef892d7e60e9a953f9f2b927e8ac25 519 PRINTS PR00095 Anthranilate synthase component I signature 443 457 2.4E-23 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D3790_06420 f1ef892d7e60e9a953f9f2b927e8ac25 519 PRINTS PR00095 Anthranilate synthase component I signature 349 362 2.4E-23 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D3790_06420 f1ef892d7e60e9a953f9f2b927e8ac25 519 PRINTS PR00095 Anthranilate synthase component I signature 458 472 2.4E-23 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D3790_06420 f1ef892d7e60e9a953f9f2b927e8ac25 519 PRINTS PR00095 Anthranilate synthase component I signature 363 376 2.4E-23 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D3790_06420 f1ef892d7e60e9a953f9f2b927e8ac25 519 Gene3D G3DSA:3.60.120.10 4 519 1.3E-186 T 01-11-2018 IPR005801 ADC synthase GO:0009058 D3790_06420 f1ef892d7e60e9a953f9f2b927e8ac25 519 SUPERFAMILY SSF56322 13 509 4.84E-161 T 01-11-2018 IPR005801 ADC synthase GO:0009058 D3790_06420 f1ef892d7e60e9a953f9f2b927e8ac25 519 Pfam PF00425 chorismate binding enzyme 241 501 2.4E-86 T 01-11-2018 IPR015890 Chorismate-utilising enzyme, C-terminal D3790_06420 f1ef892d7e60e9a953f9f2b927e8ac25 519 PIRSF PIRSF001373 2 519 1.2E-241 T 01-11-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D3790_06420 f1ef892d7e60e9a953f9f2b927e8ac25 519 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 514 3.2E-225 T 01-11-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D3790_11230 8d795cc624337848ab3e5f510b48190a 85 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 16 70 4.3E-22 T 01-11-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 D3790_11230 8d795cc624337848ab3e5f510b48190a 85 SUPERFAMILY SSF116842 10 75 6.28E-20 T 01-11-2018 D3790_11230 8d795cc624337848ab3e5f510b48190a 85 PIRSF PIRSF006488 3 85 3.3E-22 T 01-11-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 D3790_11230 8d795cc624337848ab3e5f510b48190a 85 Gene3D G3DSA:1.10.287.1040 9 85 5.5E-23 T 01-11-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 D3790_11230 8d795cc624337848ab3e5f510b48190a 85 Pfam PF02609 Exonuclease VII small subunit 16 67 1.8E-19 T 01-11-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 D3790_11230 8d795cc624337848ab3e5f510b48190a 85 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 15 57 8.0E-14 T 01-11-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 D3790_11230 8d795cc624337848ab3e5f510b48190a 85 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 15 75 15.953 T 01-11-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 D3790_13045 523fae4affd64db2da39c3a0635ca56d 257 SMART SM00062 35 254 6.6E-66 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3790_13045 523fae4affd64db2da39c3a0635ca56d 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 01-11-2018 IPR018313 Solute-binding protein family 3, conserved site D3790_13045 523fae4affd64db2da39c3a0635ca56d 257 Gene3D G3DSA:3.40.190.10 36 246 1.0E-66 T 01-11-2018 D3790_13045 523fae4affd64db2da39c3a0635ca56d 257 Gene3D G3DSA:3.40.190.10 118 215 1.0E-66 T 01-11-2018 D3790_13045 523fae4affd64db2da39c3a0635ca56d 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 252 8.1E-59 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3790_13045 523fae4affd64db2da39c3a0635ca56d 257 SUPERFAMILY SSF53850 7 252 1.09E-63 T 01-11-2018 D3790_05585 907929e23a79b740bf6c656c380ef9aa 262 Gene3D G3DSA:3.40.50.720 1 262 1.2E-60 T 01-11-2018 D3790_05585 907929e23a79b740bf6c656c380ef9aa 262 SUPERFAMILY SSF51735 6 253 8.97E-61 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_05585 907929e23a79b740bf6c656c380ef9aa 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.4E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_05585 907929e23a79b740bf6c656c380ef9aa 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 9.4E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_05585 907929e23a79b740bf6c656c380ef9aa 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 9.4E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_05585 907929e23a79b740bf6c656c380ef9aa 262 PIRSF PIRSF000094 1 260 1.0E-123 T 01-11-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D3790_05585 907929e23a79b740bf6c656c380ef9aa 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 1.5E-83 T 01-11-2018 D3790_11215 d7bef8fa51691472bbb46b28e68d3cd2 389 Pfam PF04055 Radical SAM superfamily 133 283 1.1E-7 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D3790_11215 d7bef8fa51691472bbb46b28e68d3cd2 389 TIGRFAM TIGR00238 TIGR00238: KamA family protein 18 346 8.6E-60 T 01-11-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase D3790_11215 d7bef8fa51691472bbb46b28e68d3cd2 389 Pfam PF13353 4Fe-4S single cluster domain 127 208 1.0E-5 T 01-11-2018 D3790_11215 d7bef8fa51691472bbb46b28e68d3cd2 389 SUPERFAMILY SSF102114 123 379 3.66E-20 T 01-11-2018 D3790_11215 d7bef8fa51691472bbb46b28e68d3cd2 389 SMART SM00729 126 329 0.0043 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D3790_11215 d7bef8fa51691472bbb46b28e68d3cd2 389 Gene3D G3DSA:3.20.20.70 60 354 2.5E-78 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_15595 cefebca902cf4ba4e269f3cd1e4d6cdc 545 PRINTS PR00701 60kDa inner membrane protein signature 492 515 6.2E-105 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D3790_15595 cefebca902cf4ba4e269f3cd1e4d6cdc 545 PRINTS PR00701 60kDa inner membrane protein signature 317 337 6.2E-105 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D3790_15595 cefebca902cf4ba4e269f3cd1e4d6cdc 545 PRINTS PR00701 60kDa inner membrane protein signature 408 431 6.2E-105 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D3790_15595 cefebca902cf4ba4e269f3cd1e4d6cdc 545 PRINTS PR00701 60kDa inner membrane protein signature 243 258 6.2E-105 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D3790_15595 cefebca902cf4ba4e269f3cd1e4d6cdc 545 PRINTS PR00701 60kDa inner membrane protein signature 210 228 6.2E-105 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D3790_15595 cefebca902cf4ba4e269f3cd1e4d6cdc 545 PRINTS PR00701 60kDa inner membrane protein signature 455 477 6.2E-105 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D3790_15595 cefebca902cf4ba4e269f3cd1e4d6cdc 545 PRINTS PR00701 60kDa inner membrane protein signature 151 171 6.2E-105 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D3790_15595 cefebca902cf4ba4e269f3cd1e4d6cdc 545 PRINTS PR00701 60kDa inner membrane protein signature 2 23 6.2E-105 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D3790_15595 cefebca902cf4ba4e269f3cd1e4d6cdc 545 PRINTS PR00701 60kDa inner membrane protein signature 61 82 6.2E-105 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D3790_15595 cefebca902cf4ba4e269f3cd1e4d6cdc 545 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 346 525 6.5E-70 T 01-11-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_15595 cefebca902cf4ba4e269f3cd1e4d6cdc 545 PRINTS PR01900 YidC translocation/secretion protein signature 332 348 7.6E-29 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D3790_15595 cefebca902cf4ba4e269f3cd1e4d6cdc 545 PRINTS PR01900 YidC translocation/secretion protein signature 481 505 7.6E-29 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D3790_15595 cefebca902cf4ba4e269f3cd1e4d6cdc 545 PRINTS PR01900 YidC translocation/secretion protein signature 461 476 7.6E-29 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D3790_15595 cefebca902cf4ba4e269f3cd1e4d6cdc 545 Pfam PF02096 60Kd inner membrane protein 347 524 3.5E-60 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D3790_15595 cefebca902cf4ba4e269f3cd1e4d6cdc 545 Pfam PF14849 YidC periplasmic domain 56 336 7.1E-87 T 01-11-2018 IPR038210 Membrane insertase YidC, periplasmic domain D3790_15595 cefebca902cf4ba4e269f3cd1e4d6cdc 545 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 345 7.8E-111 T 01-11-2018 IPR028053 Membrane insertase YidC, N-terminal D3790_15595 cefebca902cf4ba4e269f3cd1e4d6cdc 545 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 528 26.398 T 01-11-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 D3790_15595 cefebca902cf4ba4e269f3cd1e4d6cdc 545 Gene3D G3DSA:2.70.98.90 51 326 4.2E-103 T 01-11-2018 IPR038221 YidC, periplasmic domain superfamily D3790_19210 5e4d568cf3c4b6ea0cfb9a9fbe5fab96 109 SMART SM00731 1 106 7.4E-12 T 01-11-2018 IPR006640 SprT-like D3790_19210 5e4d568cf3c4b6ea0cfb9a9fbe5fab96 109 Pfam PF17283 SprT-like zinc ribbon domain 66 106 7.8E-8 T 01-11-2018 IPR035240 SprT-like, zinc ribbon domain D3790_19210 5e4d568cf3c4b6ea0cfb9a9fbe5fab96 109 Pfam PF10263 SprT-like family 4 60 7.8E-11 T 01-11-2018 IPR006640 SprT-like D3790_13190 4538e2b7fd3bc9b8680708c06f260241 149 SUPERFAMILY SSF103365 10 81 3.01E-21 T 01-11-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 D3790_13190 4538e2b7fd3bc9b8680708c06f260241 149 SUPERFAMILY SSF103365 81 149 2.62E-21 T 01-11-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 D3790_13190 4538e2b7fd3bc9b8680708c06f260241 149 ProSitePatterns PS01288 Uncharacterized protein family UPF0027 signature. 33 62 - T 01-11-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 D3790_13190 4538e2b7fd3bc9b8680708c06f260241 149 Gene3D G3DSA:3.90.1860.10 81 149 9.5E-17 T 01-11-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 D3790_13190 4538e2b7fd3bc9b8680708c06f260241 149 Gene3D G3DSA:3.90.1860.10 2 80 8.0E-17 T 01-11-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 D3790_13190 4538e2b7fd3bc9b8680708c06f260241 149 Pfam PF01139 tRNA-splicing ligase RtcB 81 149 5.4E-22 T 01-11-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 D3790_13190 4538e2b7fd3bc9b8680708c06f260241 149 Pfam PF01139 tRNA-splicing ligase RtcB 33 80 2.4E-18 T 01-11-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 D3790_05455 2a8a6e680645470d5a11a2972bf63ec7 487 Pfam PF14559 Tetratricopeptide repeat 354 412 2.6E-9 T 01-11-2018 D3790_05455 2a8a6e680645470d5a11a2972bf63ec7 487 SUPERFAMILY SSF48452 311 457 1.0E-13 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_05455 2a8a6e680645470d5a11a2972bf63ec7 487 Gene3D G3DSA:3.30.2010.10 74 151 7.2E-6 T 01-11-2018 D3790_05455 2a8a6e680645470d5a11a2972bf63ec7 487 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 485 42.393 T 01-11-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 D3790_05455 2a8a6e680645470d5a11a2972bf63ec7 487 Pfam PF01435 Peptidase family M48 73 259 2.0E-26 T 01-11-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 D3790_05455 2a8a6e680645470d5a11a2972bf63ec7 487 Gene3D G3DSA:1.25.40.10 310 486 4.1E-16 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_11510 3354d1074028c306a230e3fc36d0ce28 552 Pfam PF02872 5'-nucleotidase, C-terminal domain 365 509 3.0E-32 T 01-11-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_11510 3354d1074028c306a230e3fc36d0ce28 552 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 01-11-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_11510 3354d1074028c306a230e3fc36d0ce28 552 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 4.4E-18 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 D3790_11510 3354d1074028c306a230e3fc36d0ce28 552 Gene3D G3DSA:3.90.780.10 365 551 4.2E-60 T 01-11-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_11510 3354d1074028c306a230e3fc36d0ce28 552 PRINTS PR01607 Apyrase family signature 32 50 1.2E-57 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_11510 3354d1074028c306a230e3fc36d0ce28 552 PRINTS PR01607 Apyrase family signature 486 505 1.2E-57 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_11510 3354d1074028c306a230e3fc36d0ce28 552 PRINTS PR01607 Apyrase family signature 207 224 1.2E-57 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_11510 3354d1074028c306a230e3fc36d0ce28 552 PRINTS PR01607 Apyrase family signature 419 442 1.2E-57 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_11510 3354d1074028c306a230e3fc36d0ce28 552 PRINTS PR01607 Apyrase family signature 285 305 1.2E-57 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_11510 3354d1074028c306a230e3fc36d0ce28 552 PRINTS PR01607 Apyrase family signature 238 261 1.2E-57 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_11510 3354d1074028c306a230e3fc36d0ce28 552 SUPERFAMILY SSF55816 365 541 4.71E-53 T 01-11-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_11510 3354d1074028c306a230e3fc36d0ce28 552 Gene3D G3DSA:3.60.21.10 26 364 3.7E-130 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like D3790_11510 3354d1074028c306a230e3fc36d0ce28 552 SUPERFAMILY SSF56300 27 363 4.03E-98 T 01-11-2018 D3790_11510 3354d1074028c306a230e3fc36d0ce28 552 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 01-11-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_10100 082f36ef3fb3ce44277d413df0a5a7f5 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 7.2E-67 T 01-11-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 D3790_10100 082f36ef3fb3ce44277d413df0a5a7f5 196 PIRSF PIRSF000495 1 196 7.7E-62 T 01-11-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 D3790_10100 082f36ef3fb3ce44277d413df0a5a7f5 196 Pfam PF00117 Glutamine amidotransferase class-I 5 194 9.1E-19 T 01-11-2018 IPR017926 Glutamine amidotransferase D3790_10100 082f36ef3fb3ce44277d413df0a5a7f5 196 Gene3D G3DSA:3.40.50.880 1 196 5.3E-67 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_10100 082f36ef3fb3ce44277d413df0a5a7f5 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 32.89 T 01-11-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 D3790_10100 082f36ef3fb3ce44277d413df0a5a7f5 196 SUPERFAMILY SSF52317 3 195 1.78E-50 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_10615 8febe99b50820d3fdfad1c3097124231 233 Pfam PF13098 Thioredoxin-like domain 105 228 1.5E-27 T 01-11-2018 IPR012336 Thioredoxin-like fold D3790_10615 8febe99b50820d3fdfad1c3097124231 233 SUPERFAMILY SSF54423 22 78 7.06E-12 T 01-11-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 D3790_10615 8febe99b50820d3fdfad1c3097124231 233 Gene3D G3DSA:3.40.30.10 71 232 8.8E-49 T 01-11-2018 D3790_10615 8febe99b50820d3fdfad1c3097124231 233 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 01-11-2018 IPR017937 Thioredoxin, conserved site GO:0045454 D3790_10615 8febe99b50820d3fdfad1c3097124231 233 SUPERFAMILY SSF52833 90 230 2.02E-36 T 01-11-2018 IPR036249 Thioredoxin-like superfamily D3790_10615 8febe99b50820d3fdfad1c3097124231 233 Pfam PF10411 Disulfide bond isomerase protein N-terminus 29 76 3.8E-11 T 01-11-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal D3790_10615 8febe99b50820d3fdfad1c3097124231 233 Gene3D G3DSA:3.10.450.70 22 70 8.6E-15 T 01-11-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 D3790_08200 5e8d0a6bd55f3f0c631c19409cd3267a 78 PIRSF PIRSF002855 1 78 5.1E-26 T 01-11-2018 IPR016367 Murein-lipoprotein D3790_08200 5e8d0a6bd55f3f0c631c19409cd3267a 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 2.2E-23 T 01-11-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 D3790_08200 5e8d0a6bd55f3f0c631c19409cd3267a 78 SUPERFAMILY SSF58042 23 77 2.09E-18 T 01-11-2018 D3790_08200 5e8d0a6bd55f3f0c631c19409cd3267a 78 Gene3D G3DSA:1.20.5.190 22 77 7.3E-23 T 01-11-2018 D3790_11280 51b5a907ce0c8404c851d57191a32e78 321 SUPERFAMILY SSF49503 119 281 2.77E-51 T 01-11-2018 IPR008972 Cupredoxin D3790_11280 51b5a907ce0c8404c851d57191a32e78 321 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 15 239 1.2E-117 T 01-11-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 D3790_11280 51b5a907ce0c8404c851d57191a32e78 321 SUPERFAMILY SSF81464 27 117 1.03E-21 T 01-11-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_11280 51b5a907ce0c8404c851d57191a32e78 321 Pfam PF06481 COX Aromatic Rich Motif 239 285 1.2E-19 T 01-11-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 D3790_11280 51b5a907ce0c8404c851d57191a32e78 321 Gene3D G3DSA:2.60.40.420 113 282 2.7E-60 T 01-11-2018 IPR008972 Cupredoxin D3790_11280 51b5a907ce0c8404c851d57191a32e78 321 PIRSF PIRSF000292 1 313 2.5E-133 T 01-11-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 D3790_11280 51b5a907ce0c8404c851d57191a32e78 321 Gene3D G3DSA:1.10.287.90 28 112 1.8E-31 T 01-11-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_11280 51b5a907ce0c8404c851d57191a32e78 321 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 148 219 1.5E-5 T 01-11-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_19080 8d2a5fec24dd34aa1b4a5098bdcd485c 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 1.2E-32 T 01-11-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 D3790_19080 8d2a5fec24dd34aa1b4a5098bdcd485c 120 Gene3D G3DSA:3.30.479.10 1 120 4.2E-48 T 01-11-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 D3790_19080 8d2a5fec24dd34aa1b4a5098bdcd485c 120 PIRSF PIRSF006113 1 120 2.2E-53 T 01-11-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 D3790_19080 8d2a5fec24dd34aa1b4a5098bdcd485c 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 3.4E-33 T 01-11-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 D3790_19080 8d2a5fec24dd34aa1b4a5098bdcd485c 120 SUPERFAMILY SSF55620 2 119 6.12E-39 T 01-11-2018 D3790_05305 71c09a47b768870f4905d7ee40c604ea 102 Pfam PF11080 Endoribonuclease GhoS 2 87 6.7E-7 T 01-11-2018 IPR022597 Endoribonuclease antitoxin GhoS GO:0004521 D3790_07030 084ca3cd05cf34f01548c98caae9986f 297 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 2 263 4.6E-12 T 01-11-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 D3790_10090 51778cfaf8c6b7306eda91556a0a85e8 368 SUPERFAMILY SSF53383 10 353 1.14E-82 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_10090 51778cfaf8c6b7306eda91556a0a85e8 368 Pfam PF00155 Aminotransferase class I and II 48 352 2.1E-58 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D3790_10090 51778cfaf8c6b7306eda91556a0a85e8 368 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 212 221 - T 01-11-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 D3790_10090 51778cfaf8c6b7306eda91556a0a85e8 368 Gene3D G3DSA:3.40.640.10 55 259 2.1E-131 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_10090 51778cfaf8c6b7306eda91556a0a85e8 368 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 10 356 54.126 T 01-11-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 D3790_10090 51778cfaf8c6b7306eda91556a0a85e8 368 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 353 2.2E-119 T 01-11-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 D3790_10090 51778cfaf8c6b7306eda91556a0a85e8 368 Gene3D G3DSA:3.90.1150.10 10 348 2.1E-131 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_18405 50b8d9687266a8be5dad554975deff8a 285 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 284 2.0E-114 T 01-11-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D3790_18405 50b8d9687266a8be5dad554975deff8a 285 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 01-11-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D3790_18405 50b8d9687266a8be5dad554975deff8a 285 Gene3D G3DSA:3.30.479.20 57 143 5.5E-28 T 01-11-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 D3790_18405 50b8d9687266a8be5dad554975deff8a 285 SUPERFAMILY SSF54713 144 283 3.53E-53 T 01-11-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 D3790_18405 50b8d9687266a8be5dad554975deff8a 285 SUPERFAMILY SSF54713 56 141 2.83E-20 T 01-11-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 D3790_18405 50b8d9687266a8be5dad554975deff8a 285 Hamap MF_00050 Elongation factor Ts [tsf]. 1 282 79.289 T 01-11-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D3790_18405 50b8d9687266a8be5dad554975deff8a 285 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 01-11-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D3790_18405 50b8d9687266a8be5dad554975deff8a 285 Gene3D G3DSA:1.10.8.10 1 56 3.8E-27 T 01-11-2018 D3790_18405 50b8d9687266a8be5dad554975deff8a 285 Pfam PF00889 Elongation factor TS 73 265 3.4E-67 T 01-11-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 D3790_18405 50b8d9687266a8be5dad554975deff8a 285 Gene3D G3DSA:1.10.286.20 189 228 3.0E-23 T 01-11-2018 D3790_18405 50b8d9687266a8be5dad554975deff8a 285 SUPERFAMILY SSF46934 3 56 7.06E-19 T 01-11-2018 IPR009060 UBA-like superfamily GO:0005515 D3790_18255 3b47117bb7c8cfcdc9af8ce67949de4e 364 Gene3D G3DSA:2.40.240.50 123 261 8.0E-151 T 01-11-2018 D3790_18255 3b47117bb7c8cfcdc9af8ce67949de4e 364 Pfam PF06725 3D domain 276 353 4.7E-25 T 01-11-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 D3790_18255 3b47117bb7c8cfcdc9af8ce67949de4e 364 SMART SM00925 123 256 1.2E-63 T 01-11-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 D3790_18255 3b47117bb7c8cfcdc9af8ce67949de4e 364 Gene3D G3DSA:2.40.40.10 52 352 8.0E-151 T 01-11-2018 IPR036908 RlpA-like domain superfamily D3790_18255 3b47117bb7c8cfcdc9af8ce67949de4e 364 SUPERFAMILY SSF50685 23 353 8.02E-111 T 01-11-2018 IPR036908 RlpA-like domain superfamily D3790_18255 3b47117bb7c8cfcdc9af8ce67949de4e 364 Pfam PF03562 MltA specific insert domain 93 256 1.5E-38 T 01-11-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 D3790_18255 3b47117bb7c8cfcdc9af8ce67949de4e 364 PIRSF PIRSF019422 6 147 1.3E-13 T 01-11-2018 IPR026044 Membrane-bound lytic murein transglycosylase A D3790_18255 3b47117bb7c8cfcdc9af8ce67949de4e 364 PIRSF PIRSF019422 144 363 2.0E-68 T 01-11-2018 IPR026044 Membrane-bound lytic murein transglycosylase A D3790_12000 75df2499de72664dfad465aea560ffd6 67 Gene3D G3DSA:3.60.21.10 9 67 7.3E-12 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like D3790_12000 75df2499de72664dfad465aea560ffd6 67 SUPERFAMILY SSF56300 11 65 2.18E-10 T 01-11-2018 D3790_18200 1907b331b2e85bd47055b9ac451a024a 161 Pfam PF10713 Protein of unknown function (DUF2509) 25 160 1.5E-44 T 01-11-2018 IPR019652 Protein of unknown function DUF2509 D3790_00345 458fb884ea4aabb1498de80277523d99 476 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 4 461 8.5E-170 T 01-11-2018 IPR021207 Integrating conjugative element protein, PFL4705 D3790_00345 458fb884ea4aabb1498de80277523d99 476 Pfam PF03743 Bacterial conjugation TrbI-like protein 339 447 2.0E-7 T 01-11-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI D3790_00800 458fb884ea4aabb1498de80277523d99 476 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 4 461 8.5E-170 T 01-11-2018 IPR021207 Integrating conjugative element protein, PFL4705 D3790_00800 458fb884ea4aabb1498de80277523d99 476 Pfam PF03743 Bacterial conjugation TrbI-like protein 339 447 2.0E-7 T 01-11-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI D3790_17350 54c0eccb4987b4b608dd9a4cf39d50e0 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 66 3.7E-12 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_17350 54c0eccb4987b4b608dd9a4cf39d50e0 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.3E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_17350 54c0eccb4987b4b608dd9a4cf39d50e0 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.3E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_17350 54c0eccb4987b4b608dd9a4cf39d50e0 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.3E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_17350 54c0eccb4987b4b608dd9a4cf39d50e0 296 Pfam PF03466 LysR substrate binding domain 92 293 5.0E-19 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_17350 54c0eccb4987b4b608dd9a4cf39d50e0 296 Gene3D G3DSA:3.40.190.10 95 288 1.1E-11 T 01-11-2018 D3790_17350 54c0eccb4987b4b608dd9a4cf39d50e0 296 SUPERFAMILY SSF46785 6 84 4.99E-14 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_17350 54c0eccb4987b4b608dd9a4cf39d50e0 296 Gene3D G3DSA:3.40.190.10 168 266 1.1E-11 T 01-11-2018 D3790_17350 54c0eccb4987b4b608dd9a4cf39d50e0 296 Gene3D G3DSA:1.10.10.10 2 87 7.5E-16 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_17350 54c0eccb4987b4b608dd9a4cf39d50e0 296 SUPERFAMILY SSF53850 94 294 1.03E-18 T 01-11-2018 D3790_02205 8630f0c2f1dc647463a26af5473898f4 255 Gene3D G3DSA:3.40.50.150 10 251 6.4E-49 T 01-11-2018 D3790_02205 8630f0c2f1dc647463a26af5473898f4 255 Pfam PF05175 Methyltransferase small domain 45 139 7.6E-10 T 01-11-2018 IPR007848 Methyltransferase small domain GO:0008168 D3790_02205 8630f0c2f1dc647463a26af5473898f4 255 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 12 255 52.813 T 01-11-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 D3790_02205 8630f0c2f1dc647463a26af5473898f4 255 SUPERFAMILY SSF53335 14 187 9.03E-24 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_01085 72fc3dee1f0509e1e80fbfc9a203ab66 148 Pfam PF01478 Type IV leader peptidase family 1 107 1.1E-24 T 01-11-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 D3790_01085 72fc3dee1f0509e1e80fbfc9a203ab66 148 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 10 27 1.1E-20 T 01-11-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial D3790_01085 72fc3dee1f0509e1e80fbfc9a203ab66 148 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 90 105 1.1E-20 T 01-11-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial D3790_01085 72fc3dee1f0509e1e80fbfc9a203ab66 148 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 78 89 1.1E-20 T 01-11-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial D3790_01085 72fc3dee1f0509e1e80fbfc9a203ab66 148 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 67 77 1.1E-20 T 01-11-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial D3790_01085 72fc3dee1f0509e1e80fbfc9a203ab66 148 Gene3D G3DSA:1.20.120.1220 2 118 4.2E-5 T 01-11-2018 D3790_10990 33feb3d56dba9e858376598f3073a5d3 106 Pfam PF04999 Cell division protein FtsL 10 104 1.8E-30 T 01-11-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 D3790_10990 33feb3d56dba9e858376598f3073a5d3 106 Hamap MF_00910 Cell division protein FtsL [ftsL]. 20 103 15.81 T 01-11-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 D3790_10990 33feb3d56dba9e858376598f3073a5d3 106 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 22 103 4.2E-24 T 01-11-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 D3790_19075 10baf1261c23abd7191ce9af605489fe 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 222 7.8E-110 T 01-11-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 D3790_19075 10baf1261c23abd7191ce9af605489fe 223 Gene3D G3DSA:3.20.20.70 2 223 1.6E-56 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_19075 10baf1261c23abd7191ce9af605489fe 223 Pfam PF04055 Radical SAM superfamily 26 123 1.0E-8 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D3790_19075 10baf1261c23abd7191ce9af605489fe 223 PIRSF PIRSF000370 1 223 8.4E-70 T 01-11-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 D3790_19075 10baf1261c23abd7191ce9af605489fe 223 SUPERFAMILY SSF102114 23 128 6.54E-8 T 01-11-2018 D3790_19075 10baf1261c23abd7191ce9af605489fe 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 36.871 T 01-11-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 D3790_19075 10baf1261c23abd7191ce9af605489fe 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 1.5E-12 T 01-11-2018 D3790_06025 aee301383297e4517332fa51db0b67b7 348 Pfam PF06812 ImpA, N-terminal, type VI secretion system 7 130 3.6E-34 T 01-11-2018 IPR010657 ImpA, N-terminal D3790_06025 aee301383297e4517332fa51db0b67b7 348 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 1 337 8.5E-56 T 01-11-2018 IPR017740 Type VI secretion system-associated, ImpA D3790_07495 285eccc894c027d94ecdaa2b3e66c6dc 195 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 9.3E-18 T 01-11-2018 IPR000182 GNAT domain D3790_07495 285eccc894c027d94ecdaa2b3e66c6dc 195 SUPERFAMILY SSF55729 13 186 5.22E-39 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_07495 285eccc894c027d94ecdaa2b3e66c6dc 195 Gene3D G3DSA:3.40.630.30 10 191 2.1E-44 T 01-11-2018 D3790_02200 f86ba4640826ea1e3b26e057d54aabb4 446 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 428 49.175 T 01-11-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 D3790_02200 f86ba4640826ea1e3b26e057d54aabb4 446 Gene3D G3DSA:3.40.50.300 223 388 8.0E-52 T 01-11-2018 D3790_02200 f86ba4640826ea1e3b26e057d54aabb4 446 Pfam PF00271 Helicase conserved C-terminal domain 235 343 2.3E-29 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_02200 f86ba4640826ea1e3b26e057d54aabb4 446 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 01-11-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D3790_02200 f86ba4640826ea1e3b26e057d54aabb4 446 SUPERFAMILY SSF52540 76 360 1.52E-66 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_02200 f86ba4640826ea1e3b26e057d54aabb4 446 Pfam PF00270 DEAD/DEAH box helicase 28 197 3.6E-46 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D3790_02200 f86ba4640826ea1e3b26e057d54aabb4 446 SMART SM00490 262 343 5.8E-30 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_02200 f86ba4640826ea1e3b26e057d54aabb4 446 Gene3D G3DSA:3.40.50.300 1 222 6.5E-71 T 01-11-2018 D3790_02200 f86ba4640826ea1e3b26e057d54aabb4 446 SMART SM00487 23 225 1.3E-58 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_03710 bcca749c37358739cb1c0cec4837d35c 95 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 4 94 7.3E-32 T 01-11-2018 IPR011846 Cyd operon protein YbgE D3790_03710 bcca749c37358739cb1c0cec4837d35c 95 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 15 92 1.6E-28 T 01-11-2018 IPR011846 Cyd operon protein YbgE D3790_05270 f01084c976244e32add09e05c7b9ed94 227 Pfam PF00072 Response regulator receiver domain 3 112 2.1E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_05270 f01084c976244e32add09e05c7b9ed94 227 SUPERFAMILY SSF52172 1 178 1.17E-38 T 01-11-2018 IPR011006 CheY-like superfamily D3790_05270 f01084c976244e32add09e05c7b9ed94 227 SMART SM00448 1 112 1.1E-38 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_05270 f01084c976244e32add09e05c7b9ed94 227 Gene3D G3DSA:1.10.10.10 123 226 1.3E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_05270 f01084c976244e32add09e05c7b9ed94 227 Gene3D G3DSA:3.40.50.2300 1 121 9.2E-39 T 01-11-2018 D3790_05270 f01084c976244e32add09e05c7b9ed94 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 1.5E-20 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D3790_05270 f01084c976244e32add09e05c7b9ed94 227 SMART SM00862 145 220 2.4E-18 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D3790_05145 2dbecab7d94d168f08e4ddb158fecb8f 244 Gene3D G3DSA:3.40.50.720 1 244 5.1E-86 T 01-11-2018 D3790_05145 2dbecab7d94d168f08e4ddb158fecb8f 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D3790_05145 2dbecab7d94d168f08e4ddb158fecb8f 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.3E-15 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_05145 2dbecab7d94d168f08e4ddb158fecb8f 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.3E-15 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_05145 2dbecab7d94d168f08e4ddb158fecb8f 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.3E-15 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_05145 2dbecab7d94d168f08e4ddb158fecb8f 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 2.1E-101 T 01-11-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D3790_05145 2dbecab7d94d168f08e4ddb158fecb8f 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.7E-50 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_05145 2dbecab7d94d168f08e4ddb158fecb8f 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.7E-50 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_05145 2dbecab7d94d168f08e4ddb158fecb8f 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 4.7E-50 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_05145 2dbecab7d94d168f08e4ddb158fecb8f 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 4.7E-50 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_05145 2dbecab7d94d168f08e4ddb158fecb8f 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.7E-50 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_05145 2dbecab7d94d168f08e4ddb158fecb8f 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 4.7E-50 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_05145 2dbecab7d94d168f08e4ddb158fecb8f 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 1.5E-67 T 01-11-2018 D3790_05145 2dbecab7d94d168f08e4ddb158fecb8f 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 5.5E-4 T 01-11-2018 D3790_05145 2dbecab7d94d168f08e4ddb158fecb8f 244 SUPERFAMILY SSF51735 4 243 4.0E-85 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_03630 1f49251cd8eb00ecf06bbb703b55b3c5 247 Gene3D G3DSA:3.40.1390.30 14 232 7.9E-84 T 01-11-2018 D3790_03630 1f49251cd8eb00ecf06bbb703b55b3c5 247 SUPERFAMILY SSF102705 1 246 1.02E-80 T 01-11-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily D3790_03630 1f49251cd8eb00ecf06bbb703b55b3c5 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 233 2.0E-55 T 01-11-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 D3790_03630 1f49251cd8eb00ecf06bbb703b55b3c5 247 Gene3D G3DSA:3.40.1390.30 97 218 7.9E-84 T 01-11-2018 D3790_03630 1f49251cd8eb00ecf06bbb703b55b3c5 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 1.3E-66 T 01-11-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 D3790_12525 4527aaf4ee0e85e8c00da4b2aa106eb8 344 SUPERFAMILY SSF46689 13 138 2.51E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_12525 4527aaf4ee0e85e8c00da4b2aa106eb8 344 SUPERFAMILY SSF53098 207 321 2.53E-8 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_12525 4527aaf4ee0e85e8c00da4b2aa106eb8 344 Pfam PF13551 Winged helix-turn helix 30 83 4.9E-7 T 01-11-2018 D3790_12525 4527aaf4ee0e85e8c00da4b2aa106eb8 344 Pfam PF13358 DDE superfamily endonuclease 177 311 2.2E-29 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_12525 4527aaf4ee0e85e8c00da4b2aa106eb8 344 Gene3D G3DSA:3.30.420.470 142 341 4.1E-14 T 01-11-2018 D3790_12710 4d86b24907425717add78478962d1083 233 SUPERFAMILY SSF52540 2 231 4.57E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_12710 4d86b24907425717add78478962d1083 233 SMART SM00382 26 212 3.3E-4 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_12710 4d86b24907425717add78478962d1083 233 Pfam PF00005 ABC transporter 17 161 1.6E-34 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_12710 4d86b24907425717add78478962d1083 233 PIRSF PIRSF039137 1 233 5.4E-103 T 01-11-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 D3790_12710 4d86b24907425717add78478962d1083 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_12710 4d86b24907425717add78478962d1083 233 Gene3D G3DSA:3.40.50.300 1 233 1.3E-64 T 01-11-2018 D3790_13595 a2072aedf6fb80e8b3843e64e5ed7596 426 SUPERFAMILY SSF54980 365 421 5.75E-13 T 01-11-2018 IPR035647 EF-G domain III/V-like D3790_13595 a2072aedf6fb80e8b3843e64e5ed7596 426 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 2.3E-28 T 01-11-2018 IPR032305 GTP-binding protein, middle domain D3790_13595 a2072aedf6fb80e8b3843e64e5ed7596 426 PIRSF PIRSF006809 5 421 9.1E-148 T 01-11-2018 IPR016496 GTPase HflX GO:0005525 D3790_13595 a2072aedf6fb80e8b3843e64e5ed7596 426 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 8.1E-31 T 01-11-2018 IPR025121 GTPase HflX, N-terminal D3790_13595 a2072aedf6fb80e8b3843e64e5ed7596 426 Pfam PF01926 50S ribosome-binding GTPase 200 318 3.8E-21 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_13595 a2072aedf6fb80e8b3843e64e5ed7596 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 3.2E-10 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_13595 a2072aedf6fb80e8b3843e64e5ed7596 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 3.2E-10 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_13595 a2072aedf6fb80e8b3843e64e5ed7596 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 3.2E-10 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_13595 a2072aedf6fb80e8b3843e64e5ed7596 426 SUPERFAMILY SSF52540 197 374 6.96E-40 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_13595 a2072aedf6fb80e8b3843e64e5ed7596 426 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.394 T 01-11-2018 IPR016496 GTPase HflX GO:0005525 D3790_13595 a2072aedf6fb80e8b3843e64e5ed7596 426 Gene3D G3DSA:3.40.50.300 197 368 6.4E-39 T 01-11-2018 D3790_13595 a2072aedf6fb80e8b3843e64e5ed7596 426 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 361 6.6E-154 T 01-11-2018 IPR016496 GTPase HflX GO:0005525 D3790_13595 a2072aedf6fb80e8b3843e64e5ed7596 426 Gene3D G3DSA:3.40.50.11060 17 138 3.2E-37 T 01-11-2018 D3790_19105 6d0114583894d11c8a9fb0cddd2a5a86 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 4.9E-64 T 01-11-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 D3790_19105 6d0114583894d11c8a9fb0cddd2a5a86 302 SUPERFAMILY SSF52402 6 210 4.68E-74 T 01-11-2018 D3790_19105 6d0114583894d11c8a9fb0cddd2a5a86 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 6.9E-162 T 01-11-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 D3790_19105 6d0114583894d11c8a9fb0cddd2a5a86 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 57.515 T 01-11-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 D3790_19105 6d0114583894d11c8a9fb0cddd2a5a86 302 Gene3D G3DSA:3.40.50.620 7 212 4.3E-64 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_19105 6d0114583894d11c8a9fb0cddd2a5a86 302 PIRSF PIRSF002936 1 302 1.5E-153 T 01-11-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 D3790_11440 144c0f72084c3c448c2c17aa9b62a5f3 1142 Gene3D G3DSA:3.30.70.100 1019 1112 1.7E-21 T 01-11-2018 D3790_11440 144c0f72084c3c448c2c17aa9b62a5f3 1142 Pfam PF00924 Mechanosensitive ion channel 908 1107 1.1E-56 T 01-11-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 D3790_11440 144c0f72084c3c448c2c17aa9b62a5f3 1142 SUPERFAMILY SSF82689 1018 1118 5.75E-26 T 01-11-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 D3790_11440 144c0f72084c3c448c2c17aa9b62a5f3 1142 SUPERFAMILY SSF50182 951 1016 3.27E-16 T 01-11-2018 IPR010920 LSM domain superfamily D3790_11440 144c0f72084c3c448c2c17aa9b62a5f3 1142 Gene3D G3DSA:2.30.30.60 966 1015 1.9E-12 T 01-11-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily D3790_11440 144c0f72084c3c448c2c17aa9b62a5f3 1142 SUPERFAMILY SSF82861 867 949 1.01E-7 T 01-11-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 D3790_11440 144c0f72084c3c448c2c17aa9b62a5f3 1142 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 980 1014 - T 01-11-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 D3790_11440 144c0f72084c3c448c2c17aa9b62a5f3 1142 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 531 847 1.0E-96 T 01-11-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 D3790_11440 144c0f72084c3c448c2c17aa9b62a5f3 1142 Pfam PF12795 Mechanosensitive ion channel porin domain 63 305 5.8E-60 T 01-11-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain D3790_12500 ce565450258bacf84a2f1b1ce9bc2838 105 Gene3D G3DSA:3.40.640.10 10 100 1.1E-29 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_12500 ce565450258bacf84a2f1b1ce9bc2838 105 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 53 66 - T 01-11-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 D3790_12500 ce565450258bacf84a2f1b1ce9bc2838 105 SUPERFAMILY SSF53383 14 100 1.38E-23 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_12500 ce565450258bacf84a2f1b1ce9bc2838 105 Pfam PF00155 Aminotransferase class I and II 18 100 2.4E-17 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D3790_08595 4a0d90a84d1086c5b412dbccdbf3c125 458 Gene3D G3DSA:1.20.1250.20 246 457 5.1E-36 T 01-11-2018 D3790_08595 4a0d90a84d1086c5b412dbccdbf3c125 458 PIRSF PIRSF002808 10 458 1.9E-104 T 01-11-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 D3790_08595 4a0d90a84d1086c5b412dbccdbf3c125 458 Pfam PF07690 Major Facilitator Superfamily 35 396 7.2E-35 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_08595 4a0d90a84d1086c5b412dbccdbf3c125 458 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 01-11-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 D3790_08595 4a0d90a84d1086c5b412dbccdbf3c125 458 SUPERFAMILY SSF103473 19 449 1.96E-57 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_08595 4a0d90a84d1086c5b412dbccdbf3c125 458 Gene3D G3DSA:1.20.1250.20 28 228 2.6E-35 T 01-11-2018 D3790_08595 4a0d90a84d1086c5b412dbccdbf3c125 458 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 2.8E-134 T 01-11-2018 D3790_10455 13a5bc65654157b0bd5e22adb3ecf011 214 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 4 183 3.8E-50 T 01-11-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 D3790_10455 13a5bc65654157b0bd5e22adb3ecf011 214 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 198 4.0E-47 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D3790_10455 13a5bc65654157b0bd5e22adb3ecf011 214 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 01-11-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 D3790_10455 13a5bc65654157b0bd5e22adb3ecf011 214 PIRSF PIRSF000709 2 190 2.0E-8 T 01-11-2018 D3790_10455 13a5bc65654157b0bd5e22adb3ecf011 214 SMART SM00855 2 159 2.8E-18 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D3790_10455 13a5bc65654157b0bd5e22adb3ecf011 214 Gene3D G3DSA:3.40.50.1240 1 206 1.0E-51 T 01-11-2018 IPR029033 Histidine phosphatase superfamily D3790_10455 13a5bc65654157b0bd5e22adb3ecf011 214 SUPERFAMILY SSF53254 1 197 1.58E-51 T 01-11-2018 IPR029033 Histidine phosphatase superfamily D3790_08765 595d6bf7f916db46573ba0e31b64cac8 104 SUPERFAMILY SSF143100 7 51 3.4E-5 T 01-11-2018 IPR035069 TTHA1013/TTHA0281-like D3790_03820 7bd2001206a3df068357b50357e2856f 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 266 3.9E-61 T 01-11-2018 D3790_03820 7bd2001206a3df068357b50357e2856f 271 Gene3D G3DSA:3.30.1240.10 84 195 1.6E-60 T 01-11-2018 D3790_03820 7bd2001206a3df068357b50357e2856f 271 SUPERFAMILY SSF56784 1 270 1.06E-64 T 01-11-2018 IPR036412 HAD-like superfamily D3790_03820 7bd2001206a3df068357b50357e2856f 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 239 5.4E-23 T 01-11-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 D3790_03820 7bd2001206a3df068357b50357e2856f 271 Gene3D G3DSA:3.40.50.1000 5 266 1.6E-60 T 01-11-2018 IPR023214 HAD superfamily D3790_03820 7bd2001206a3df068357b50357e2856f 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 220 242 - T 01-11-2018 D3790_03820 7bd2001206a3df068357b50357e2856f 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 266 3.1E-64 T 01-11-2018 IPR000150 Cof family GO:0016787 D3790_06990 612fd7887cd685e845ddd3f11160b8d3 147 Pfam PF13673 Acetyltransferase (GNAT) domain 39 145 3.0E-12 T 01-11-2018 IPR000182 GNAT domain D3790_06990 612fd7887cd685e845ddd3f11160b8d3 147 SUPERFAMILY SSF55729 6 143 5.87E-21 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_06990 612fd7887cd685e845ddd3f11160b8d3 147 Gene3D G3DSA:3.40.630.30 6 146 1.2E-27 T 01-11-2018 D3790_19130 46a699603cb68849875cff14c93ec0fc 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 01-11-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 D3790_19130 46a699603cb68849875cff14c93ec0fc 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.646 T 01-11-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 D3790_19130 46a699603cb68849875cff14c93ec0fc 157 Pfam PF02542 YgbB family 1 154 5.3E-67 T 01-11-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 D3790_19130 46a699603cb68849875cff14c93ec0fc 157 Gene3D G3DSA:3.30.1330.50 1 157 3.5E-72 T 01-11-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 D3790_19130 46a699603cb68849875cff14c93ec0fc 157 SUPERFAMILY SSF69765 1 156 6.54E-66 T 01-11-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 D3790_19130 46a699603cb68849875cff14c93ec0fc 157 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 3.9E-71 T 01-11-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 D3790_17750 d07a31db25283718dbbed4183699adfc 198 Gene3D G3DSA:3.40.630.30 4 195 1.1E-40 T 01-11-2018 D3790_17750 d07a31db25283718dbbed4183699adfc 198 Pfam PF13302 Acetyltransferase (GNAT) domain 15 154 2.8E-14 T 01-11-2018 IPR000182 GNAT domain D3790_17750 d07a31db25283718dbbed4183699adfc 198 SUPERFAMILY SSF55729 6 179 5.31E-37 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_11790 c920f476b7978a5391b45e2176fe8a0d 461 Pfam PF00939 Sodium:sulfate symporter transmembrane region 27 460 1.9E-54 T 01-11-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 D3790_11790 c920f476b7978a5391b45e2176fe8a0d 461 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 410 426 - T 01-11-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 D3790_11790 c920f476b7978a5391b45e2176fe8a0d 461 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 43 460 1.0E-113 T 01-11-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 D3790_05280 75329027f7aa402c499164d00ca05b0e 208 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 206 35.609 T 01-11-2018 IPR007451 High frequency lysogenization protein HflD D3790_05280 75329027f7aa402c499164d00ca05b0e 208 SUPERFAMILY SSF101322 2 206 4.32E-76 T 01-11-2018 IPR035932 HflD-like superfamily D3790_05280 75329027f7aa402c499164d00ca05b0e 208 Pfam PF04356 Protein of unknown function (DUF489) 7 198 1.7E-72 T 01-11-2018 IPR007451 High frequency lysogenization protein HflD D3790_05280 75329027f7aa402c499164d00ca05b0e 208 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 197 2.0E-84 T 01-11-2018 D3790_05280 75329027f7aa402c499164d00ca05b0e 208 Gene3D G3DSA:1.10.3890.10 1 208 1.4E-75 T 01-11-2018 IPR035932 HflD-like superfamily D3790_14885 90c0e42c1095590cbc40eab33d8c5fc6 167 Pfam PF00588 SpoU rRNA Methylase family 2 151 8.6E-30 T 01-11-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 D3790_14885 90c0e42c1095590cbc40eab33d8c5fc6 167 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 162 1.9E-69 T 01-11-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 D3790_14885 90c0e42c1095590cbc40eab33d8c5fc6 167 PIRSF PIRSF029256 1 164 1.1E-68 T 01-11-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 D3790_14885 90c0e42c1095590cbc40eab33d8c5fc6 167 SUPERFAMILY SSF75217 1 162 7.85E-41 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases D3790_14885 90c0e42c1095590cbc40eab33d8c5fc6 167 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 161 34.301 T 01-11-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 D3790_14885 90c0e42c1095590cbc40eab33d8c5fc6 167 Gene3D G3DSA:3.40.1280.10 1 167 1.4E-70 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D3790_01100 9c44728233503e575c53eaf051733b47 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 9.9E-50 T 01-11-2018 IPR003774 Protein of unknown function UPF0301 D3790_01100 9c44728233503e575c53eaf051733b47 187 Gene3D G3DSA:3.40.1740.10 1 187 4.0E-65 T 01-11-2018 D3790_01100 9c44728233503e575c53eaf051733b47 187 SUPERFAMILY SSF143456 1 187 2.22E-65 T 01-11-2018 D3790_01100 9c44728233503e575c53eaf051733b47 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.456 T 01-11-2018 IPR003774 Protein of unknown function UPF0301 D3790_17425 88eea52fc67fe25b4ff4f151fdfbff7f 178 SUPERFAMILY SSF158710 36 175 9.29E-51 T 01-11-2018 IPR023153 PSPTO4464-like domain superfamily D3790_17425 88eea52fc67fe25b4ff4f151fdfbff7f 178 Gene3D G3DSA:1.10.60.30 34 107 4.9E-21 T 01-11-2018 D3790_17425 88eea52fc67fe25b4ff4f151fdfbff7f 178 PIRSF PIRSF016183 7 178 2.4E-69 T 01-11-2018 IPR006839 Ribosome-associated, YjgA D3790_17425 88eea52fc67fe25b4ff4f151fdfbff7f 178 Gene3D G3DSA:1.10.60.30 110 178 3.5E-27 T 01-11-2018 D3790_17425 88eea52fc67fe25b4ff4f151fdfbff7f 178 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 13 176 22.932 T 01-11-2018 IPR006839 Ribosome-associated, YjgA D3790_17425 88eea52fc67fe25b4ff4f151fdfbff7f 178 Pfam PF04751 Protein of unknown function (DUF615) 23 172 5.9E-55 T 01-11-2018 IPR006839 Ribosome-associated, YjgA D3790_10960 10c248726fac03d45caee66c3883606f 397 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 28 383 1.1E-130 T 01-11-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_10960 10c248726fac03d45caee66c3883606f 397 Pfam PF01098 Cell cycle protein 30 384 1.6E-119 T 01-11-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_10960 10c248726fac03d45caee66c3883606f 397 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 26 393 40.415 T 01-11-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_10960 10c248726fac03d45caee66c3883606f 397 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 342 366 - T 01-11-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_14945 1566528d0c9f669da6edffdf36d6ffa1 199 Pfam PF02397 Bacterial sugar transferase 9 198 2.5E-47 T 01-11-2018 IPR003362 Bacterial sugar transferase D3790_05960 6d5205ccd451f8c73a7af8fcaf224655 147 SMART SM01321 11 131 4.3E-23 T 01-11-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D3790_05960 6d5205ccd451f8c73a7af8fcaf224655 147 SUPERFAMILY SSF143422 1 132 1.7E-36 T 01-11-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D3790_05960 6d5205ccd451f8c73a7af8fcaf224655 147 Pfam PF01797 Transposase IS200 like 13 131 1.1E-31 T 01-11-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D3790_05960 6d5205ccd451f8c73a7af8fcaf224655 147 Gene3D G3DSA:3.30.70.1290 1 135 1.1E-33 T 01-11-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D3790_04895 6d5205ccd451f8c73a7af8fcaf224655 147 SMART SM01321 11 131 4.3E-23 T 01-11-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D3790_04895 6d5205ccd451f8c73a7af8fcaf224655 147 SUPERFAMILY SSF143422 1 132 1.7E-36 T 01-11-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D3790_04895 6d5205ccd451f8c73a7af8fcaf224655 147 Pfam PF01797 Transposase IS200 like 13 131 1.1E-31 T 01-11-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D3790_04895 6d5205ccd451f8c73a7af8fcaf224655 147 Gene3D G3DSA:3.30.70.1290 1 135 1.1E-33 T 01-11-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D3790_11920 d97f6760a70abaa5e61d01c92acade9d 374 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 6.9E-191 T 01-11-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 D3790_11920 d97f6760a70abaa5e61d01c92acade9d 374 Gene3D G3DSA:3.20.20.105 1 368 2.3E-172 T 01-11-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 D3790_11920 d97f6760a70abaa5e61d01c92acade9d 374 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 368 4.9E-181 T 01-11-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 D3790_11920 d97f6760a70abaa5e61d01c92acade9d 374 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 364 57.507 T 01-11-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 D3790_11920 d97f6760a70abaa5e61d01c92acade9d 374 SUPERFAMILY SSF51713 2 365 1.16E-164 T 01-11-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 D3790_11920 d97f6760a70abaa5e61d01c92acade9d 374 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 3.6E-94 T 01-11-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 D3790_19455 756e794431187215c684d60aa05d4472 382 Gene3D G3DSA:2.40.160.10 23 382 3.9E-132 T 01-11-2018 IPR023614 Porin domain superfamily D3790_19455 756e794431187215c684d60aa05d4472 382 PRINTS PR00183 E.coli/Salmonella-type porin signature 280 299 1.1E-59 T 01-11-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 D3790_19455 756e794431187215c684d60aa05d4472 382 PRINTS PR00183 E.coli/Salmonella-type porin signature 246 263 1.1E-59 T 01-11-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 D3790_19455 756e794431187215c684d60aa05d4472 382 PRINTS PR00183 E.coli/Salmonella-type porin signature 152 174 1.1E-59 T 01-11-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 D3790_19455 756e794431187215c684d60aa05d4472 382 PRINTS PR00183 E.coli/Salmonella-type porin signature 52 70 1.1E-59 T 01-11-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 D3790_19455 756e794431187215c684d60aa05d4472 382 PRINTS PR00183 E.coli/Salmonella-type porin signature 97 119 1.1E-59 T 01-11-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 D3790_19455 756e794431187215c684d60aa05d4472 382 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 1.1E-59 T 01-11-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 D3790_19455 756e794431187215c684d60aa05d4472 382 SUPERFAMILY SSF56935 23 382 2.75E-74 T 01-11-2018 D3790_19455 756e794431187215c684d60aa05d4472 382 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 154 165 1.4E-12 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 D3790_19455 756e794431187215c684d60aa05d4472 382 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 334 351 1.4E-12 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 D3790_19455 756e794431187215c684d60aa05d4472 382 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 97 107 1.4E-12 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 D3790_19455 756e794431187215c684d60aa05d4472 382 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 240 252 1.4E-12 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 D3790_19455 756e794431187215c684d60aa05d4472 382 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 53 64 1.4E-12 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 D3790_19455 756e794431187215c684d60aa05d4472 382 Pfam PF00267 Gram-negative porin 28 382 2.1E-125 T 01-11-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 D3790_11595 822b00ad91104968c770f34f16557c63 240 Gene3D G3DSA:3.60.21.10 1 236 4.5E-18 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like D3790_11595 822b00ad91104968c770f34f16557c63 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 125.565 T 01-11-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 D3790_11595 822b00ad91104968c770f34f16557c63 240 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 4.7E-11 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 D3790_11595 822b00ad91104968c770f34f16557c63 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 231 4.9E-105 T 01-11-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 D3790_11595 822b00ad91104968c770f34f16557c63 240 SUPERFAMILY SSF56300 1 220 2.11E-31 T 01-11-2018 D3790_13055 c1532a215bce88920e4ff6db25cfd2d2 254 Pfam PF00005 ABC transporter 17 171 1.2E-36 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_13055 c1532a215bce88920e4ff6db25cfd2d2 254 PIRSF PIRSF039085 1 247 3.7E-97 T 01-11-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 D3790_13055 c1532a215bce88920e4ff6db25cfd2d2 254 SMART SM00382 26 219 3.1E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_13055 c1532a215bce88920e4ff6db25cfd2d2 254 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_13055 c1532a215bce88920e4ff6db25cfd2d2 254 Gene3D G3DSA:3.40.50.300 1 253 1.0E-74 T 01-11-2018 D3790_13055 c1532a215bce88920e4ff6db25cfd2d2 254 SUPERFAMILY SSF52540 1 240 8.96E-73 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_14835 6b93261f1d5c8c2ae974071e5311149d 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 1.4E-215 T 01-11-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 D3790_14835 6b93261f1d5c8c2ae974071e5311149d 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 01-11-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 D3790_14835 6b93261f1d5c8c2ae974071e5311149d 398 Gene3D G3DSA:3.90.1150.10 38 387 1.3E-138 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_14835 6b93261f1d5c8c2ae974071e5311149d 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.423 T 01-11-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 D3790_14835 6b93261f1d5c8c2ae974071e5311149d 398 Gene3D G3DSA:3.40.640.10 58 296 1.3E-138 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_14835 6b93261f1d5c8c2ae974071e5311149d 398 SUPERFAMILY SSF53383 5 396 1.33E-124 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_14835 6b93261f1d5c8c2ae974071e5311149d 398 Pfam PF00155 Aminotransferase class I and II 43 386 6.4E-77 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D3790_11625 cb080d627e3806dff6508203d79e9b90 156 SUPERFAMILY SSF52499 13 150 1.44E-35 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 D3790_11625 cb080d627e3806dff6508203d79e9b90 156 Pfam PF00857 Isochorismatase family 10 148 3.7E-29 T 01-11-2018 IPR000868 Isochorismatase-like GO:0003824 D3790_11625 cb080d627e3806dff6508203d79e9b90 156 Gene3D G3DSA:3.40.50.850 3 151 9.5E-34 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 D3790_06205 6d8cc0747ac31f35443cc9c3fac77cdc 198 Gene3D G3DSA:3.40.50.300 1 141 2.7E-28 T 01-11-2018 D3790_06205 6d8cc0747ac31f35443cc9c3fac77cdc 198 SUPERFAMILY SSF57716 142 192 2.61E-16 T 01-11-2018 D3790_06205 6d8cc0747ac31f35443cc9c3fac77cdc 198 PIRSF PIRSF035805 1 198 7.7E-61 T 01-11-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 D3790_06205 6d8cc0747ac31f35443cc9c3fac77cdc 198 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.3 T 01-11-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 D3790_06205 6d8cc0747ac31f35443cc9c3fac77cdc 198 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 01-11-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 D3790_06205 6d8cc0747ac31f35443cc9c3fac77cdc 198 Gene3D G3DSA:3.30.60.20 144 189 7.8E-9 T 01-11-2018 D3790_06205 6d8cc0747ac31f35443cc9c3fac77cdc 198 Pfam PF00265 Thymidine kinase 2 186 9.7E-62 T 01-11-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 D3790_06205 6d8cc0747ac31f35443cc9c3fac77cdc 198 SUPERFAMILY SSF52540 1 141 1.13E-42 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16785 85b69b60e52dcf306a4bfada9b5a4c89 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.797 T 01-11-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_16785 85b69b60e52dcf306a4bfada9b5a4c89 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_16785 85b69b60e52dcf306a4bfada9b5a4c89 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 4.0E-42 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_16785 85b69b60e52dcf306a4bfada9b5a4c89 124 Gene3D G3DSA:2.40.50.140 1 124 7.2E-63 T 01-11-2018 D3790_16785 85b69b60e52dcf306a4bfada9b5a4c89 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 5.7E-70 T 01-11-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_16785 85b69b60e52dcf306a4bfada9b5a4c89 124 SUPERFAMILY SSF50249 3 123 1.37E-51 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_16785 85b69b60e52dcf306a4bfada9b5a4c89 124 PIRSF PIRSF002133 1 124 5.4E-54 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_16785 85b69b60e52dcf306a4bfada9b5a4c89 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.8E-60 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_16785 85b69b60e52dcf306a4bfada9b5a4c89 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.8E-60 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_16785 85b69b60e52dcf306a4bfada9b5a4c89 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.8E-60 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_16785 85b69b60e52dcf306a4bfada9b5a4c89 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.8E-60 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_16785 85b69b60e52dcf306a4bfada9b5a4c89 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.8E-60 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_16785 85b69b60e52dcf306a4bfada9b5a4c89 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.8E-60 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_01680 db9c4a81a8655ed56ff30fe122406545 667 SMART SM00493 1 123 5.7E-21 T 01-11-2018 IPR006171 TOPRIM domain D3790_01680 db9c4a81a8655ed56ff30fe122406545 667 SUPERFAMILY SSF56712 1 604 2.22E-176 T 01-11-2018 IPR023405 DNA topoisomerase, type IA, core domain D3790_01680 db9c4a81a8655ed56ff30fe122406545 667 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 619 648 1.7E-8 T 01-11-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 D3790_01680 db9c4a81a8655ed56ff30fe122406545 667 SMART SM00436 123 218 9.0E-29 T 01-11-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 D3790_01680 db9c4a81a8655ed56ff30fe122406545 667 SUPERFAMILY SSF57783 603 650 9.35E-8 T 01-11-2018 D3790_01680 db9c4a81a8655ed56ff30fe122406545 667 SMART SM00437 272 556 6.5E-65 T 01-11-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 D3790_01680 db9c4a81a8655ed56ff30fe122406545 667 Pfam PF01131 DNA topoisomerase 150 590 5.1E-113 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_01680 db9c4a81a8655ed56ff30fe122406545 667 Gene3D G3DSA:1.10.460.10 158 600 1.6E-151 T 01-11-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 D3790_01680 db9c4a81a8655ed56ff30fe122406545 667 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 309 324 - T 01-11-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 D3790_01680 db9c4a81a8655ed56ff30fe122406545 667 Gene3D G3DSA:2.70.20.10 212 486 1.6E-151 T 01-11-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 D3790_01680 db9c4a81a8655ed56ff30fe122406545 667 Gene3D G3DSA:1.10.290.10 281 410 1.6E-151 T 01-11-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 D3790_01680 db9c4a81a8655ed56ff30fe122406545 667 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 2.8E-25 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_01680 db9c4a81a8655ed56ff30fe122406545 667 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 188 206 2.8E-25 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_01680 db9c4a81a8655ed56ff30fe122406545 667 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 519 533 2.8E-25 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_01680 db9c4a81a8655ed56ff30fe122406545 667 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 315 324 2.8E-25 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_01680 db9c4a81a8655ed56ff30fe122406545 667 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 97 110 2.8E-25 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D3790_01680 db9c4a81a8655ed56ff30fe122406545 667 Pfam PF01751 Toprim domain 3 129 2.1E-19 T 01-11-2018 IPR006171 TOPRIM domain D3790_01680 db9c4a81a8655ed56ff30fe122406545 667 Gene3D G3DSA:3.40.50.140 1 149 8.8E-49 T 01-11-2018 D3790_01680 db9c4a81a8655ed56ff30fe122406545 667 TIGRFAM TIGR01056 topB: DNA topoisomerase III 2 662 3.1E-243 T 01-11-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 D3790_03365 fa019133ced384afe62dff06ec882216 268 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 01-11-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 D3790_03365 fa019133ced384afe62dff06ec882216 268 SUPERFAMILY SSF100950 1 261 1.38E-103 T 01-11-2018 IPR037171 NagB/RpiA transferase-like D3790_03365 fa019133ced384afe62dff06ec882216 268 Gene3D G3DSA:3.40.50.1360 1 267 1.3E-114 T 01-11-2018 D3790_03365 fa019133ced384afe62dff06ec882216 268 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 6.7E-135 T 01-11-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 D3790_03365 fa019133ced384afe62dff06ec882216 268 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 17 230 3.7E-20 T 01-11-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 D3790_03365 fa019133ced384afe62dff06ec882216 268 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.5 T 01-11-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 D3790_13195 88172f8c4f0a6ec974958f81e2eb546c 92 SUPERFAMILY SSF47413 23 86 3.49E-15 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_13195 88172f8c4f0a6ec974958f81e2eb546c 92 Gene3D G3DSA:1.10.260.40 11 89 1.4E-14 T 01-11-2018 D3790_13195 88172f8c4f0a6ec974958f81e2eb546c 92 Pfam PF13560 Helix-turn-helix domain 32 86 2.0E-12 T 01-11-2018 D3790_13195 88172f8c4f0a6ec974958f81e2eb546c 92 SMART SM00530 35 90 1.4E-10 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_18570 29702c7818387dd02097ef767a20c41e 85 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 80 8.8E-37 T 01-11-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain D3790_18570 29702c7818387dd02097ef767a20c41e 85 SUPERFAMILY SSF47413 2 73 9.9E-31 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_18570 29702c7818387dd02097ef767a20c41e 85 Gene3D G3DSA:1.10.260.40 1 71 7.0E-32 T 01-11-2018 D3790_13010 2bd89ecad9b1b7f469d19dd8ea6c2f8f 374 Pfam PF04055 Radical SAM superfamily 84 234 3.3E-9 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D3790_13010 2bd89ecad9b1b7f469d19dd8ea6c2f8f 374 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 260 362 6.3E-22 T 01-11-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 D3790_13010 2bd89ecad9b1b7f469d19dd8ea6c2f8f 374 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 6 370 7.5E-165 T 01-11-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 D3790_13010 2bd89ecad9b1b7f469d19dd8ea6c2f8f 374 SMART SM00876 260 363 9.4E-31 T 01-11-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 D3790_13010 2bd89ecad9b1b7f469d19dd8ea6c2f8f 374 SUPERFAMILY SSF102114 38 342 7.06E-53 T 01-11-2018 D3790_13010 2bd89ecad9b1b7f469d19dd8ea6c2f8f 374 Gene3D G3DSA:3.20.20.70 14 367 1.2E-102 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_09465 2025d1d9c83765b94baad4f0758ea591 372 PRINTS PR01010 Flagellar P-ring protein signature 63 78 2.6E-90 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D3790_09465 2025d1d9c83765b94baad4f0758ea591 372 PRINTS PR01010 Flagellar P-ring protein signature 128 146 2.6E-90 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D3790_09465 2025d1d9c83765b94baad4f0758ea591 372 PRINTS PR01010 Flagellar P-ring protein signature 194 212 2.6E-90 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D3790_09465 2025d1d9c83765b94baad4f0758ea591 372 PRINTS PR01010 Flagellar P-ring protein signature 43 58 2.6E-90 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D3790_09465 2025d1d9c83765b94baad4f0758ea591 372 PRINTS PR01010 Flagellar P-ring protein signature 168 186 2.6E-90 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D3790_09465 2025d1d9c83765b94baad4f0758ea591 372 PRINTS PR01010 Flagellar P-ring protein signature 28 43 2.6E-90 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D3790_09465 2025d1d9c83765b94baad4f0758ea591 372 PRINTS PR01010 Flagellar P-ring protein signature 89 108 2.6E-90 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D3790_09465 2025d1d9c83765b94baad4f0758ea591 372 PRINTS PR01010 Flagellar P-ring protein signature 111 128 2.6E-90 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D3790_09465 2025d1d9c83765b94baad4f0758ea591 372 PRINTS PR01010 Flagellar P-ring protein signature 258 270 2.6E-90 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D3790_09465 2025d1d9c83765b94baad4f0758ea591 372 Pfam PF02119 Flagellar P-ring protein 28 371 5.4E-135 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D3790_09465 2025d1d9c83765b94baad4f0758ea591 372 Hamap MF_00416 Flagellar P-ring protein [flgI]. 7 372 37.939 T 01-11-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D3790_16480 ed8f33b6acf2424ae0e6e4996d4a23e2 536 Gene3D G3DSA:3.10.105.10 293 511 1.1E-182 T 01-11-2018 D3790_16480 ed8f33b6acf2424ae0e6e4996d4a23e2 536 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 454 3.2E-100 T 01-11-2018 IPR000914 Solute-binding protein family 5 domain D3790_16480 ed8f33b6acf2424ae0e6e4996d4a23e2 536 PIRSF PIRSF002741 11 536 2.4E-109 T 01-11-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 D3790_16480 ed8f33b6acf2424ae0e6e4996d4a23e2 536 Gene3D G3DSA:3.40.190.10 212 524 1.1E-182 T 01-11-2018 D3790_16480 ed8f33b6acf2424ae0e6e4996d4a23e2 536 SUPERFAMILY SSF53850 30 535 3.8E-148 T 01-11-2018 D3790_16480 ed8f33b6acf2424ae0e6e4996d4a23e2 536 Gene3D G3DSA:3.90.76.10 51 211 1.1E-182 T 01-11-2018 D3790_17580 4bdb7079747160b1499a7fec96eb50bc 354 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 351 7.4E-151 T 01-11-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 D3790_17580 4bdb7079747160b1499a7fec96eb50bc 354 Gene3D G3DSA:2.40.10.10 34 141 3.7E-28 T 01-11-2018 D3790_17580 4bdb7079747160b1499a7fec96eb50bc 354 Pfam PF13180 PDZ domain 258 347 2.9E-15 T 01-11-2018 IPR001478 PDZ domain GO:0005515 D3790_17580 4bdb7079747160b1499a7fec96eb50bc 354 Pfam PF13365 Trypsin-like peptidase domain 81 215 5.4E-29 T 01-11-2018 D3790_17580 4bdb7079747160b1499a7fec96eb50bc 354 Gene3D G3DSA:2.30.42.10 257 352 2.2E-21 T 01-11-2018 D3790_17580 4bdb7079747160b1499a7fec96eb50bc 354 Gene3D G3DSA:2.40.10.10 142 256 8.6E-38 T 01-11-2018 D3790_17580 4bdb7079747160b1499a7fec96eb50bc 354 SUPERFAMILY SSF50156 240 347 7.36E-22 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 D3790_17580 4bdb7079747160b1499a7fec96eb50bc 354 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 8.1E-47 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D3790_17580 4bdb7079747160b1499a7fec96eb50bc 354 PRINTS PR00834 HtrA/DegQ protease family signature 111 131 8.1E-47 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D3790_17580 4bdb7079747160b1499a7fec96eb50bc 354 PRINTS PR00834 HtrA/DegQ protease family signature 90 102 8.1E-47 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D3790_17580 4bdb7079747160b1499a7fec96eb50bc 354 PRINTS PR00834 HtrA/DegQ protease family signature 151 175 8.1E-47 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D3790_17580 4bdb7079747160b1499a7fec96eb50bc 354 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 8.1E-47 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D3790_17580 4bdb7079747160b1499a7fec96eb50bc 354 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 8.1E-47 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D3790_17580 4bdb7079747160b1499a7fec96eb50bc 354 SUPERFAMILY SSF50494 46 254 1.12E-59 T 01-11-2018 IPR009003 Peptidase S1, PA clan D3790_17580 4bdb7079747160b1499a7fec96eb50bc 354 SMART SM00228 257 339 3.2E-10 T 01-11-2018 IPR001478 PDZ domain GO:0005515 D3790_02365 1b1617392d069918c71397b95acbcd10 173 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.635 T 01-11-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D3790_02365 1b1617392d069918c71397b95acbcd10 173 Gene3D G3DSA:1.10.287.110 1 79 5.8E-23 T 01-11-2018 IPR036869 Chaperone J-domain superfamily D3790_02365 1b1617392d069918c71397b95acbcd10 173 SUPERFAMILY SSF46565 1 73 1.02E-17 T 01-11-2018 IPR036869 Chaperone J-domain superfamily D3790_02365 1b1617392d069918c71397b95acbcd10 173 SUPERFAMILY SSF47144 77 170 7.06E-26 T 01-11-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D3790_02365 1b1617392d069918c71397b95acbcd10 173 SMART SM00271 1 66 7.6E-9 T 01-11-2018 IPR001623 DnaJ domain D3790_02365 1b1617392d069918c71397b95acbcd10 173 Gene3D G3DSA:1.20.1280.20 80 171 3.5E-25 T 01-11-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D3790_02365 1b1617392d069918c71397b95acbcd10 173 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 1.1E-16 T 01-11-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D3790_02365 1b1617392d069918c71397b95acbcd10 173 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 1.8E-47 T 01-11-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D3790_13690 3ede6843a3a0042521c0fe2ed0883314 181 Gene3D G3DSA:3.30.420.10 1 181 8.7E-73 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_13690 3ede6843a3a0042521c0fe2ed0883314 181 SUPERFAMILY SSF53098 3 179 5.52E-48 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_13690 3ede6843a3a0042521c0fe2ed0883314 181 Pfam PF00929 Exonuclease 9 170 5.5E-38 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D3790_13690 3ede6843a3a0042521c0fe2ed0883314 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.492 T 01-11-2018 IPR022894 Oligoribonuclease GO:0000175 D3790_13690 3ede6843a3a0042521c0fe2ed0883314 181 SMART SM00479 7 180 2.8E-20 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D3790_11710 462ca472b1c347955188d1ac6763ef35 236 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 54.425 T 01-11-2018 IPR005224 Sugar fermentation stimulation protein D3790_11710 462ca472b1c347955188d1ac6763ef35 236 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 230 4.4E-82 T 01-11-2018 IPR005224 Sugar fermentation stimulation protein D3790_11710 462ca472b1c347955188d1ac6763ef35 236 Pfam PF03749 Sugar fermentation stimulation protein 13 224 1.4E-74 T 01-11-2018 IPR005224 Sugar fermentation stimulation protein D3790_11710 462ca472b1c347955188d1ac6763ef35 236 Gene3D G3DSA:3.40.1350.60 81 233 6.4E-53 T 01-11-2018 D3790_11710 462ca472b1c347955188d1ac6763ef35 236 Gene3D G3DSA:2.40.50.580 1 80 2.1E-30 T 01-11-2018 D3790_04830 a0e46b1983def3ecf64ad57b741b7558 193 Gene3D G3DSA:1.10.3210.10 1 193 2.1E-84 T 01-11-2018 D3790_04830 a0e46b1983def3ecf64ad57b741b7558 193 Pfam PF13023 HD domain 9 169 2.7E-19 T 01-11-2018 IPR006674 HD domain D3790_04830 a0e46b1983def3ecf64ad57b741b7558 193 SUPERFAMILY SSF109604 2 191 6.54E-45 T 01-11-2018 D3790_04830 a0e46b1983def3ecf64ad57b741b7558 193 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 1 193 44.871 T 01-11-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 D3790_04830 a0e46b1983def3ecf64ad57b741b7558 193 SMART SM00471 24 149 2.1E-7 T 01-11-2018 IPR003607 HD/PDEase domain D3790_04830 a0e46b1983def3ecf64ad57b741b7558 193 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 78 183 7.0E-38 T 01-11-2018 D3790_15825 e56b49e81e82a4744c071c053dc7a961 187 SUPERFAMILY SSF55811 6 180 1.16E-34 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D3790_15825 e56b49e81e82a4744c071c053dc7a961 187 ProSitePatterns PS00893 Nudix box signature. 79 100 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D3790_15825 e56b49e81e82a4744c071c053dc7a961 187 Gene3D G3DSA:3.90.79.10 7 186 4.8E-44 T 01-11-2018 D3790_15825 e56b49e81e82a4744c071c053dc7a961 187 Pfam PF00293 NUDIX domain 45 143 2.9E-13 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D3790_17850 f40a0400f8a02a03cb4e7dab0489daf3 469 Gene3D G3DSA:1.10.443.10 233 439 2.6E-23 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_17850 f40a0400f8a02a03cb4e7dab0489daf3 469 Pfam PF00589 Phage integrase family 267 403 6.8E-13 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D3790_17850 f40a0400f8a02a03cb4e7dab0489daf3 469 SUPERFAMILY SSF56349 100 419 2.03E-32 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_17850 f40a0400f8a02a03cb4e7dab0489daf3 469 Gene3D G3DSA:3.30.160.390 4 110 1.1E-7 T 01-11-2018 IPR038488 Integrase, DNA-binding domain superfamily D3790_17850 f40a0400f8a02a03cb4e7dab0489daf3 469 Pfam PF13356 Arm DNA-binding domain 6 93 9.3E-11 T 01-11-2018 IPR025166 Integrase, DNA-binding domain D3790_16300 d5d8762b716f4550b4b0d3b0c84f66f1 79 Pfam PF09012 FeoC like transcriptional regulator 3 73 2.3E-20 T 01-11-2018 IPR015102 Transcriptional regulator HTH-type, FeoC D3790_16300 d5d8762b716f4550b4b0d3b0c84f66f1 79 Gene3D G3DSA:1.10.10.10 1 76 1.1E-29 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_16300 d5d8762b716f4550b4b0d3b0c84f66f1 79 Hamap MF_01586 Probable [Fe-S]-dependent transcriptional repressor [feoC]. 1 76 24.574 T 01-11-2018 IPR023732 Probable [Fe-S]-dependent transcriptional repressor D3790_16300 d5d8762b716f4550b4b0d3b0c84f66f1 79 SUPERFAMILY SSF46785 1 72 6.19E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_12945 df222f799d4ebd2d2f66bd7931ccbd38 225 Gene3D G3DSA:3.30.2170.10 1 216 2.8E-81 T 01-11-2018 D3790_12945 df222f799d4ebd2d2f66bd7931ccbd38 225 Hamap MF_00801 Endonuclease V [nfi]. 3 218 33.261 T 01-11-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 D3790_12945 df222f799d4ebd2d2f66bd7931ccbd38 225 Pfam PF04493 Endonuclease V 17 208 5.0E-74 T 01-11-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 D3790_10275 e93d66b1810cb2082418cfaad85eaab8 279 Gene3D G3DSA:3.40.250.10 3 153 8.1E-45 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily D3790_10275 e93d66b1810cb2082418cfaad85eaab8 279 SUPERFAMILY SSF52821 159 278 3.54E-32 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily D3790_10275 e93d66b1810cb2082418cfaad85eaab8 279 SMART SM00450 155 275 6.2E-18 T 01-11-2018 IPR001763 Rhodanese-like domain D3790_10275 e93d66b1810cb2082418cfaad85eaab8 279 SMART SM00450 7 131 2.8E-18 T 01-11-2018 IPR001763 Rhodanese-like domain D3790_10275 e93d66b1810cb2082418cfaad85eaab8 279 Gene3D G3DSA:3.40.250.10 159 279 2.8E-38 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily D3790_10275 e93d66b1810cb2082418cfaad85eaab8 279 SUPERFAMILY SSF52821 2 150 4.06E-40 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily D3790_10275 e93d66b1810cb2082418cfaad85eaab8 279 Pfam PF00581 Rhodanese-like domain 8 127 3.0E-14 T 01-11-2018 IPR001763 Rhodanese-like domain D3790_10275 e93d66b1810cb2082418cfaad85eaab8 279 Pfam PF00581 Rhodanese-like domain 160 271 2.3E-9 T 01-11-2018 IPR001763 Rhodanese-like domain D3790_02310 d26bcbec042c3cb3166db39f43a73f66 540 Pfam PF02540 NAD synthase 264 512 3.4E-73 T 01-11-2018 IPR022310 NAD/GMP synthase D3790_02310 d26bcbec042c3cb3166db39f43a73f66 540 TIGRFAM TIGR00552 nadE: NAD+ synthetase 271 516 6.6E-61 T 01-11-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 D3790_02310 d26bcbec042c3cb3166db39f43a73f66 540 Pfam PF00795 Carbon-nitrogen hydrolase 7 237 2.2E-23 T 01-11-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 D3790_02310 d26bcbec042c3cb3166db39f43a73f66 540 SUPERFAMILY SSF52402 258 521 5.82E-77 T 01-11-2018 D3790_02310 d26bcbec042c3cb3166db39f43a73f66 540 PIRSF PIRSF006630 2 253 9.3E-83 T 01-11-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 D3790_02310 d26bcbec042c3cb3166db39f43a73f66 540 PIRSF PIRSF006630 251 539 6.3E-124 T 01-11-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 D3790_02310 d26bcbec042c3cb3166db39f43a73f66 540 Gene3D G3DSA:3.40.50.620 261 539 1.7E-111 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_02310 d26bcbec042c3cb3166db39f43a73f66 540 Gene3D G3DSA:3.60.110.10 1 253 1.7E-83 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D3790_02310 d26bcbec042c3cb3166db39f43a73f66 540 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 5 537 27.868 T 01-11-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 D3790_02310 d26bcbec042c3cb3166db39f43a73f66 540 SUPERFAMILY SSF56317 3 243 3.01E-60 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D3790_15835 8f565572069c9e8fb1b6bfc482b5de8e 477 Pfam PF02378 Phosphotransferase system, EIIC 114 405 5.4E-33 T 01-11-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 D3790_15835 8f565572069c9e8fb1b6bfc482b5de8e 477 Pfam PF00367 phosphotransferase system, EIIB 13 44 9.0E-13 T 01-11-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 D3790_15835 8f565572069c9e8fb1b6bfc482b5de8e 477 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 8 461 2.6E-212 T 01-11-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 D3790_15835 8f565572069c9e8fb1b6bfc482b5de8e 477 Gene3D G3DSA:3.30.1360.60 3 80 2.3E-22 T 01-11-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 D3790_15835 8f565572069c9e8fb1b6bfc482b5de8e 477 SUPERFAMILY SSF55604 12 84 6.28E-20 T 01-11-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 D3790_15835 8f565572069c9e8fb1b6bfc482b5de8e 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 32 113 5.8E-17 T 01-11-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 D3790_02890 6c8a6adeaa87e6ced386cc1b04c91d36 133 Gene3D G3DSA:3.30.310.230 1 132 1.4E-53 T 01-11-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 D3790_02890 6c8a6adeaa87e6ced386cc1b04c91d36 133 Pfam PF07417 Transcriptional regulator Crl 6 122 4.9E-51 T 01-11-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 D3790_02890 6c8a6adeaa87e6ced386cc1b04c91d36 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 3 128 30.987 T 01-11-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 D3790_14940 9ac3883244aa6f81a0c6e471a540a037 394 Gene3D G3DSA:3.90.1150.10 257 393 1.2E-19 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_14940 9ac3883244aa6f81a0c6e471a540a037 394 SUPERFAMILY SSF53383 9 388 2.06E-103 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_14940 9ac3883244aa6f81a0c6e471a540a037 394 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 376 3.4E-97 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase D3790_14940 9ac3883244aa6f81a0c6e471a540a037 394 Gene3D G3DSA:3.40.640.10 4 256 2.4E-83 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_14940 9ac3883244aa6f81a0c6e471a540a037 394 PIRSF PIRSF000390 1 390 3.8E-117 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase D3790_14820 7537b5c013298bc2ad65a72e91eb31dc 325 SUPERFAMILY SSF53756 1 321 4.71E-73 T 01-11-2018 D3790_14820 7537b5c013298bc2ad65a72e91eb31dc 325 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 320 1.2E-128 T 01-11-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 D3790_14820 7537b5c013298bc2ad65a72e91eb31dc 325 Gene3D G3DSA:3.40.50.2000 164 324 1.2E-52 T 01-11-2018 D3790_14820 7537b5c013298bc2ad65a72e91eb31dc 325 Gene3D G3DSA:3.40.50.2000 1 163 3.2E-64 T 01-11-2018 D3790_14820 7537b5c013298bc2ad65a72e91eb31dc 325 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 298 3.9E-71 T 01-11-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 D3790_10070 bbd4f6f7ab61bd3ad54e0f7f10371884 276 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 213 1.7E-6 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 D3790_10070 bbd4f6f7ab61bd3ad54e0f7f10371884 276 SUPERFAMILY SSF51735 4 267 1.93E-27 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_10070 bbd4f6f7ab61bd3ad54e0f7f10371884 276 Gene3D G3DSA:3.40.50.720 1 271 3.9E-56 T 01-11-2018 D3790_18115 ebd64a7495c1e621db853c7bfbefacdc 272 SMART SM00271 205 270 5.6E-15 T 01-11-2018 IPR001623 DnaJ domain D3790_18115 ebd64a7495c1e621db853c7bfbefacdc 272 Pfam PF05099 Tellurite resistance protein TerB 40 170 4.3E-13 T 01-11-2018 IPR007791 Co-chaperone DjlA, N-terminal D3790_18115 ebd64a7495c1e621db853c7bfbefacdc 272 PRINTS PR00625 DnaJ domain signature 226 241 3.9E-6 T 01-11-2018 IPR001623 DnaJ domain D3790_18115 ebd64a7495c1e621db853c7bfbefacdc 272 PRINTS PR00625 DnaJ domain signature 250 270 3.9E-6 T 01-11-2018 IPR001623 DnaJ domain D3790_18115 ebd64a7495c1e621db853c7bfbefacdc 272 PRINTS PR00625 DnaJ domain signature 208 226 3.9E-6 T 01-11-2018 IPR001623 DnaJ domain D3790_18115 ebd64a7495c1e621db853c7bfbefacdc 272 Pfam PF00226 DnaJ domain 209 268 1.5E-9 T 01-11-2018 IPR001623 DnaJ domain D3790_18115 ebd64a7495c1e621db853c7bfbefacdc 272 Gene3D G3DSA:1.10.3680.10 36 190 2.0E-21 T 01-11-2018 IPR029024 TerB-like D3790_18115 ebd64a7495c1e621db853c7bfbefacdc 272 Gene3D G3DSA:1.10.287.110 194 269 4.0E-13 T 01-11-2018 IPR036869 Chaperone J-domain superfamily D3790_18115 ebd64a7495c1e621db853c7bfbefacdc 272 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 271 38.941 T 01-11-2018 IPR023749 Co-chaperone DjlA GO:0051087 D3790_18115 ebd64a7495c1e621db853c7bfbefacdc 272 SUPERFAMILY SSF46565 131 268 7.32E-29 T 01-11-2018 IPR036869 Chaperone J-domain superfamily D3790_18150 10373349f15f501b8e77744e8e946a6e 337 SUPERFAMILY SSF53850 31 332 2.8E-65 T 01-11-2018 D3790_18150 10373349f15f501b8e77744e8e946a6e 337 Pfam PF13343 Bacterial extracellular solute-binding protein 85 320 3.2E-21 T 01-11-2018 D3790_18150 10373349f15f501b8e77744e8e946a6e 337 Gene3D G3DSA:3.40.190.10 33 307 1.7E-115 T 01-11-2018 D3790_18150 10373349f15f501b8e77744e8e946a6e 337 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 29 331 1.5E-135 T 01-11-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 D3790_18150 10373349f15f501b8e77744e8e946a6e 337 Gene3D G3DSA:3.40.190.10 133 332 1.7E-115 T 01-11-2018 D3790_18150 10373349f15f501b8e77744e8e946a6e 337 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 22 337 5.5E-151 T 01-11-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 D3790_03870 b755f0f1c30452a6b1a3ee5a9053fdc0 675 Pfam PF04851 Type III restriction enzyme, res subunit 20 123 1.3E-8 T 01-11-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 D3790_03870 b755f0f1c30452a6b1a3ee5a9053fdc0 675 SUPERFAMILY SSF52540 7 419 1.7E-136 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_03870 b755f0f1c30452a6b1a3ee5a9053fdc0 675 SMART SM00487 13 430 6.5E-28 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_03870 b755f0f1c30452a6b1a3ee5a9053fdc0 675 Pfam PF12344 Ultra-violet resistance protein B 556 597 1.8E-19 T 01-11-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain D3790_03870 b755f0f1c30452a6b1a3ee5a9053fdc0 675 Gene3D G3DSA:3.40.50.300 419 600 2.9E-48 T 01-11-2018 D3790_03870 b755f0f1c30452a6b1a3ee5a9053fdc0 675 Hamap MF_00204 UvrABC system protein B [uvrB]. 7 670 43.787 T 01-11-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 D3790_03870 b755f0f1c30452a6b1a3ee5a9053fdc0 675 Gene3D G3DSA:3.40.50.300 1 235 9.0E-77 T 01-11-2018 D3790_03870 b755f0f1c30452a6b1a3ee5a9053fdc0 675 SUPERFAMILY SSF52540 41 580 9.32E-36 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_03870 b755f0f1c30452a6b1a3ee5a9053fdc0 675 Gene3D G3DSA:3.40.50.300 236 418 4.0E-52 T 01-11-2018 D3790_03870 b755f0f1c30452a6b1a3ee5a9053fdc0 675 SUPERFAMILY SSF46600 624 671 3.01E-12 T 01-11-2018 IPR036876 UVR domain superfamily D3790_03870 b755f0f1c30452a6b1a3ee5a9053fdc0 675 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 9 668 0.0 T 01-11-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 D3790_03870 b755f0f1c30452a6b1a3ee5a9053fdc0 675 SMART SM00490 464 550 8.9E-20 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_03870 b755f0f1c30452a6b1a3ee5a9053fdc0 675 Pfam PF00271 Helicase conserved C-terminal domain 446 548 3.7E-17 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_03870 b755f0f1c30452a6b1a3ee5a9053fdc0 675 Pfam PF02151 UvrB/uvrC motif 635 670 5.9E-10 T 01-11-2018 IPR001943 UVR domain GO:0005515 D3790_03870 b755f0f1c30452a6b1a3ee5a9053fdc0 675 Gene3D G3DSA:4.10.860.10 630 675 7.7E-19 T 01-11-2018 D3790_15955 a392de074cf5b71ce354fb8a16c5c7c0 68 Gene3D G3DSA:3.30.429.10 2 65 1.2E-26 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily D3790_15955 a392de074cf5b71ce354fb8a16c5c7c0 68 SUPERFAMILY SSF55331 2 64 3.95E-22 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily D3790_15955 a392de074cf5b71ce354fb8a16c5c7c0 68 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 63 4.9E-28 T 01-11-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 D3790_15955 a392de074cf5b71ce354fb8a16c5c7c0 68 Pfam PF01361 Tautomerase enzyme 2 61 1.8E-23 T 01-11-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 D3790_09900 26c97e0370591edef77f4942bdb4b007 586 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 2.1E-79 T 01-11-2018 IPR003776 YcaO-like domain D3790_09900 26c97e0370591edef77f4942bdb4b007 586 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 2.2E-157 T 01-11-2018 IPR003776 YcaO-like domain D3790_17175 4dac73941daf733e9a20251f0eb64a6e 383 Pfam PF07690 Major Facilitator Superfamily 19 182 7.1E-11 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_17175 4dac73941daf733e9a20251f0eb64a6e 383 Gene3D G3DSA:1.20.1250.20 12 192 5.5E-19 T 01-11-2018 D3790_17175 4dac73941daf733e9a20251f0eb64a6e 383 SUPERFAMILY SSF103473 16 380 7.32E-37 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_17175 4dac73941daf733e9a20251f0eb64a6e 383 Gene3D G3DSA:1.20.1250.20 200 380 2.9E-17 T 01-11-2018 D3790_12610 eb8d5cfd52fd2259a43f4e10a4fab554 753 ProSitePatterns PS00211 ABC transporters family signature. 645 659 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_12610 eb8d5cfd52fd2259a43f4e10a4fab554 753 Gene3D G3DSA:1.10.8.280 150 259 3.3E-158 T 01-11-2018 D3790_12610 eb8d5cfd52fd2259a43f4e10a4fab554 753 Gene3D G3DSA:1.20.1580.10 96 337 3.3E-158 T 01-11-2018 D3790_12610 eb8d5cfd52fd2259a43f4e10a4fab554 753 SUPERFAMILY SSF52540 10 419 6.69E-34 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_12610 eb8d5cfd52fd2259a43f4e10a4fab554 753 Pfam PF00005 ABC transporter 468 672 1.1E-11 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_12610 eb8d5cfd52fd2259a43f4e10a4fab554 753 SUPERFAMILY SSF52540 465 725 1.03E-37 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_12610 eb8d5cfd52fd2259a43f4e10a4fab554 753 Gene3D G3DSA:3.40.50.300 463 748 9.5E-98 T 01-11-2018 D3790_12610 eb8d5cfd52fd2259a43f4e10a4fab554 753 Gene3D G3DSA:1.20.1580.10 545 583 9.5E-98 T 01-11-2018 D3790_12610 eb8d5cfd52fd2259a43f4e10a4fab554 753 Gene3D G3DSA:3.40.50.300 10 438 3.3E-158 T 01-11-2018 D3790_09535 32141d97f3201bf62da39e26c8cfb118 169 Gene3D G3DSA:2.60.40.1090 26 168 5.2E-29 T 01-11-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 D3790_09535 32141d97f3201bf62da39e26c8cfb118 169 Pfam PF00419 Fimbrial protein 27 168 6.8E-16 T 01-11-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 D3790_09535 32141d97f3201bf62da39e26c8cfb118 169 SUPERFAMILY SSF49401 26 169 5.97E-25 T 01-11-2018 IPR008966 Adhesion domain superfamily D3790_04995 9ea0b1e844a4ac9bb13890f23189d916 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 8.9E-93 T 01-11-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 D3790_04995 9ea0b1e844a4ac9bb13890f23189d916 312 SUPERFAMILY SSF53613 7 291 3.27E-60 T 01-11-2018 IPR029056 Ribokinase-like D3790_04995 9ea0b1e844a4ac9bb13890f23189d916 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 2.6E-92 T 01-11-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 D3790_04995 9ea0b1e844a4ac9bb13890f23189d916 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 01-11-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 D3790_04995 9ea0b1e844a4ac9bb13890f23189d916 312 PIRSF PIRSF000535 2 311 5.2E-106 T 01-11-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 D3790_04995 9ea0b1e844a4ac9bb13890f23189d916 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 01-11-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 D3790_04995 9ea0b1e844a4ac9bb13890f23189d916 312 Pfam PF00294 pfkB family carbohydrate kinase 14 293 5.6E-54 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB D3790_04995 9ea0b1e844a4ac9bb13890f23189d916 312 Gene3D G3DSA:3.40.1190.20 2 311 2.3E-83 T 01-11-2018 IPR029056 Ribokinase-like D3790_18020 a5b40803433eecff50a40828d316511c 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 9.3E-85 T 01-11-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D3790_18020 a5b40803433eecff50a40828d316511c 217 SUPERFAMILY SSF55821 7 211 1.33E-87 T 01-11-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily D3790_18020 a5b40803433eecff50a40828d316511c 217 Gene3D G3DSA:3.90.870.10 1 217 3.1E-95 T 01-11-2018 D3790_18020 a5b40803433eecff50a40828d316511c 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 43.271 T 01-11-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D3790_18020 a5b40803433eecff50a40828d316511c 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 209 8.4E-85 T 01-11-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D3790_07000 b9321fe1d9e60c67d73b9f529fb2943d 1033 Pfam PF00082 Subtilase family 70 395 8.9E-42 T 01-11-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 D3790_07000 b9321fe1d9e60c67d73b9f529fb2943d 1033 SUPERFAMILY SSF52743 52 407 3.01E-58 T 01-11-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 D3790_07000 b9321fe1d9e60c67d73b9f529fb2943d 1033 Pfam PF12951 Passenger-associated-transport-repeat 471 501 2.1E-5 T 01-11-2018 IPR013425 Autotransporter-associated beta strand repeat D3790_07000 b9321fe1d9e60c67d73b9f529fb2943d 1033 SMART SM00869 760 1023 1.2E-52 T 01-11-2018 IPR005546 Autotransporter beta-domain D3790_07000 b9321fe1d9e60c67d73b9f529fb2943d 1033 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 345 355 - T 01-11-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site D3790_07000 b9321fe1d9e60c67d73b9f529fb2943d 1033 PRINTS PR00723 Subtilisin serine protease family (S8) signature 344 360 9.6E-12 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related D3790_07000 b9321fe1d9e60c67d73b9f529fb2943d 1033 PRINTS PR00723 Subtilisin serine protease family (S8) signature 113 126 9.6E-12 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related D3790_07000 b9321fe1d9e60c67d73b9f529fb2943d 1033 PRINTS PR00723 Subtilisin serine protease family (S8) signature 70 89 9.6E-12 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related D3790_07000 b9321fe1d9e60c67d73b9f529fb2943d 1033 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 470 502 1.9E-8 T 01-11-2018 IPR013425 Autotransporter-associated beta strand repeat D3790_07000 b9321fe1d9e60c67d73b9f529fb2943d 1033 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 556 1033 1.8E-58 T 01-11-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 D3790_07000 b9321fe1d9e60c67d73b9f529fb2943d 1033 Pfam PF03797 Autotransporter beta-domain 763 1013 1.3E-61 T 01-11-2018 IPR005546 Autotransporter beta-domain D3790_07000 b9321fe1d9e60c67d73b9f529fb2943d 1033 Gene3D G3DSA:2.40.128.130 711 1033 1.1E-70 T 01-11-2018 IPR036709 Autotransporter beta-domain superfamily D3790_07000 b9321fe1d9e60c67d73b9f529fb2943d 1033 SUPERFAMILY SSF103515 719 1033 6.93E-66 T 01-11-2018 IPR036709 Autotransporter beta-domain superfamily D3790_08000 8eade73b3e8b85078ecdb0822f8b17f9 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 01-11-2018 IPR019844 Cold-shock conserved site D3790_08000 8eade73b3e8b85078ecdb0822f8b17f9 71 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 2.9E-33 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_08000 8eade73b3e8b85078ecdb0822f8b17f9 71 PRINTS PR00050 Cold shock protein signature 7 22 2.6E-18 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_08000 8eade73b3e8b85078ecdb0822f8b17f9 71 PRINTS PR00050 Cold shock protein signature 43 61 2.6E-18 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_08000 8eade73b3e8b85078ecdb0822f8b17f9 71 PRINTS PR00050 Cold shock protein signature 28 37 2.6E-18 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_08000 8eade73b3e8b85078ecdb0822f8b17f9 71 SUPERFAMILY SSF50249 3 69 1.2E-25 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_08000 8eade73b3e8b85078ecdb0822f8b17f9 71 PIRSF PIRSF002599 1 71 7.2E-26 T 01-11-2018 IPR012156 Cold shock, CspA GO:0003676 D3790_08000 8eade73b3e8b85078ecdb0822f8b17f9 71 Gene3D G3DSA:2.40.50.140 2 68 3.2E-30 T 01-11-2018 D3790_08000 8eade73b3e8b85078ecdb0822f8b17f9 71 SMART SM00357 6 70 2.8E-30 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 D3790_17995 8fdc0c7e0310cff17ace9b583605bb32 206 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 204 7.9E-50 T 01-11-2018 IPR016476 SH3 domain protein D3790_17995 8fdc0c7e0310cff17ace9b583605bb32 206 Pfam PF08239 Bacterial SH3 domain 34 85 1.1E-9 T 01-11-2018 IPR003646 SH3-like domain, bacterial-type D3790_17995 8fdc0c7e0310cff17ace9b583605bb32 206 Gene3D G3DSA:2.30.30.40 19 88 4.3E-9 T 01-11-2018 D3790_17995 8fdc0c7e0310cff17ace9b583605bb32 206 SMART SM00287 23 88 1.4E-5 T 01-11-2018 IPR003646 SH3-like domain, bacterial-type D3790_17995 8fdc0c7e0310cff17ace9b583605bb32 206 PIRSF PIRSF006158 1 205 8.9E-62 T 01-11-2018 IPR016476 SH3 domain protein D3790_02615 74d86597bc661dc8c4cb0b1982c378b0 110 SUPERFAMILY SSF47413 1 70 2.82E-17 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_02615 74d86597bc661dc8c4cb0b1982c378b0 110 SMART SM00530 6 61 2.2E-14 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_02615 74d86597bc661dc8c4cb0b1982c378b0 110 Pfam PF01381 Helix-turn-helix 8 59 2.2E-15 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_02615 74d86597bc661dc8c4cb0b1982c378b0 110 Gene3D G3DSA:1.10.260.40 3 103 1.8E-19 T 01-11-2018 D3790_01330 8dcf5cd07488646c9de2c93ab2f89995 283 PIRSF PIRSF016184 4 282 2.3E-62 T 01-11-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 D3790_01330 8dcf5cd07488646c9de2c93ab2f89995 283 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 11 273 4.3E-46 T 01-11-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 D3790_01330 8dcf5cd07488646c9de2c93ab2f89995 283 Gene3D G3DSA:3.10.310.10 12 124 2.5E-74 T 01-11-2018 D3790_01330 8dcf5cd07488646c9de2c93ab2f89995 283 Gene3D G3DSA:3.10.310.10 125 266 2.5E-74 T 01-11-2018 D3790_01330 8dcf5cd07488646c9de2c93ab2f89995 283 SUPERFAMILY SSF54506 7 277 1.57E-54 T 01-11-2018 D3790_01330 8dcf5cd07488646c9de2c93ab2f89995 283 Pfam PF02567 Phenazine biosynthesis-like protein 13 272 1.4E-51 T 01-11-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 D3790_12955 27ac7634581fa5a7256cfe59f1d35da6 732 Gene3D G3DSA:1.10.1370.10 197 662 1.7E-244 T 01-11-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 D3790_12955 27ac7634581fa5a7256cfe59f1d35da6 732 SUPERFAMILY SSF55486 62 729 4.77E-175 T 01-11-2018 D3790_12955 27ac7634581fa5a7256cfe59f1d35da6 732 Pfam PF01432 Peptidase family M3 282 729 1.6E-137 T 01-11-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 D3790_12955 27ac7634581fa5a7256cfe59f1d35da6 732 Gene3D G3DSA:1.10.1370.40 85 724 1.7E-244 T 01-11-2018 D3790_17290 93145dc387a1c3bdc0210f540e387cad 199 Gene3D G3DSA:3.90.950.10 10 198 4.5E-35 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D3790_17290 93145dc387a1c3bdc0210f540e387cad 199 Pfam PF01931 Protein of unknown function DUF84 26 190 1.2E-33 T 01-11-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 D3790_17290 93145dc387a1c3bdc0210f540e387cad 199 SUPERFAMILY SSF52972 22 190 5.23E-25 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D3790_07160 0926e5d7ae7e4dd612b6e63d2e20067b 1301 Gene3D G3DSA:3.40.50.300 253 421 1.3E-56 T 01-11-2018 D3790_07160 0926e5d7ae7e4dd612b6e63d2e20067b 1301 Pfam PF00270 DEAD/DEAH box helicase 86 233 3.8E-7 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D3790_07160 0926e5d7ae7e4dd612b6e63d2e20067b 1301 Pfam PF11898 Domain of unknown function (DUF3418) 714 1297 7.0E-233 T 01-11-2018 IPR024590 RNA helicase HrpA, C-terminal D3790_07160 0926e5d7ae7e4dd612b6e63d2e20067b 1301 SMART SM00847 464 560 1.1E-37 T 01-11-2018 IPR007502 Helicase-associated domain GO:0004386 D3790_07160 0926e5d7ae7e4dd612b6e63d2e20067b 1301 SMART SM00490 304 404 5.2E-14 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_07160 0926e5d7ae7e4dd612b6e63d2e20067b 1301 SMART SM00382 92 384 2.2E-5 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_07160 0926e5d7ae7e4dd612b6e63d2e20067b 1301 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 623 700 5.8E-17 T 01-11-2018 IPR011709 Domain of unknown function DUF1605 D3790_07160 0926e5d7ae7e4dd612b6e63d2e20067b 1301 Gene3D G3DSA:3.40.50.300 28 252 3.4E-77 T 01-11-2018 D3790_07160 0926e5d7ae7e4dd612b6e63d2e20067b 1301 SMART SM00487 74 259 1.5E-28 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_07160 0926e5d7ae7e4dd612b6e63d2e20067b 1301 Gene3D G3DSA:1.20.120.1080 449 553 9.8E-19 T 01-11-2018 D3790_07160 0926e5d7ae7e4dd612b6e63d2e20067b 1301 Pfam PF00271 Helicase conserved C-terminal domain 283 403 2.0E-11 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_07160 0926e5d7ae7e4dd612b6e63d2e20067b 1301 Pfam PF04408 Helicase associated domain (HA2) 466 558 3.4E-17 T 01-11-2018 IPR007502 Helicase-associated domain GO:0004386 D3790_07160 0926e5d7ae7e4dd612b6e63d2e20067b 1301 SUPERFAMILY SSF52540 74 602 2.63E-114 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_07160 0926e5d7ae7e4dd612b6e63d2e20067b 1301 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 14 1297 0.0 T 01-11-2018 IPR010222 RNA helicase HrpA GO:0004004 D3790_09450 3eb0253cb7cbf354af5faa6f4bd5b062 322 Gene3D G3DSA:1.20.1330.10 40 268 8.0E-56 T 01-11-2018 D3790_09450 3eb0253cb7cbf354af5faa6f4bd5b062 322 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 195 2.1E-55 T 01-11-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 D3790_09450 3eb0253cb7cbf354af5faa6f4bd5b062 322 SUPERFAMILY SSF64518 2 318 3.79E-47 T 01-11-2018 D3790_09450 3eb0253cb7cbf354af5faa6f4bd5b062 322 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 2.6E-18 T 01-11-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 D3790_01320 2eaffc6b330562da10a5b3405ee19894 209 Pfam PF00857 Isochorismatase family 33 204 8.6E-36 T 01-11-2018 IPR000868 Isochorismatase-like GO:0003824 D3790_01320 2eaffc6b330562da10a5b3405ee19894 209 Gene3D G3DSA:3.40.50.850 3 207 4.3E-68 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 D3790_01320 2eaffc6b330562da10a5b3405ee19894 209 PRINTS PR01398 Isochorismatase signature 167 185 9.1E-34 T 01-11-2018 IPR016291 Isochorismatase GO:0008908 D3790_01320 2eaffc6b330562da10a5b3405ee19894 209 PRINTS PR01398 Isochorismatase signature 79 98 9.1E-34 T 01-11-2018 IPR016291 Isochorismatase GO:0008908 D3790_01320 2eaffc6b330562da10a5b3405ee19894 209 PRINTS PR01398 Isochorismatase signature 111 133 9.1E-34 T 01-11-2018 IPR016291 Isochorismatase GO:0008908 D3790_01320 2eaffc6b330562da10a5b3405ee19894 209 PRINTS PR01398 Isochorismatase signature 62 79 9.1E-34 T 01-11-2018 IPR016291 Isochorismatase GO:0008908 D3790_01320 2eaffc6b330562da10a5b3405ee19894 209 PRINTS PR01398 Isochorismatase signature 185 202 9.1E-34 T 01-11-2018 IPR016291 Isochorismatase GO:0008908 D3790_01320 2eaffc6b330562da10a5b3405ee19894 209 SUPERFAMILY SSF52499 4 207 8.9E-55 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 D3790_06060 d08c5a49ef07fc322390d65db56cdeef 355 SUPERFAMILY SSF141571 12 153 6.02E-27 T 01-11-2018 D3790_06060 d08c5a49ef07fc322390d65db56cdeef 355 Gene3D G3DSA:2.160.20.100 2 158 2.6E-26 T 01-11-2018 D3790_06060 d08c5a49ef07fc322390d65db56cdeef 355 Pfam PF00805 Pentapeptide repeats (8 copies) 24 59 0.0037 T 01-11-2018 IPR001646 Pentapeptide repeat D3790_06060 d08c5a49ef07fc322390d65db56cdeef 355 Pfam PF00805 Pentapeptide repeats (8 copies) 197 231 9.4E-8 T 01-11-2018 IPR001646 Pentapeptide repeat D3790_06060 d08c5a49ef07fc322390d65db56cdeef 355 Gene3D G3DSA:2.160.20.80 159 337 1.5E-30 T 01-11-2018 D3790_06060 d08c5a49ef07fc322390d65db56cdeef 355 SUPERFAMILY SSF141571 154 320 1.08E-32 T 01-11-2018 D3790_06060 d08c5a49ef07fc322390d65db56cdeef 355 Pfam PF13599 Pentapeptide repeats (9 copies) 73 149 5.7E-12 T 01-11-2018 IPR001646 Pentapeptide repeat D3790_06060 d08c5a49ef07fc322390d65db56cdeef 355 Pfam PF13599 Pentapeptide repeats (9 copies) 243 316 9.2E-7 T 01-11-2018 IPR001646 Pentapeptide repeat D3790_10885 2f1b44dfc72a723e9bc9682ec5bd0c70 206 Pfam PF01121 Dephospho-CoA kinase 3 178 6.5E-71 T 01-11-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 D3790_10885 2f1b44dfc72a723e9bc9682ec5bd0c70 206 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 178 1.6E-60 T 01-11-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 D3790_10885 2f1b44dfc72a723e9bc9682ec5bd0c70 206 SUPERFAMILY SSF52540 1 198 7.94E-41 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_10885 2f1b44dfc72a723e9bc9682ec5bd0c70 206 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 204 27.189 T 01-11-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 D3790_10885 2f1b44dfc72a723e9bc9682ec5bd0c70 206 Gene3D G3DSA:3.40.50.300 1 206 5.9E-65 T 01-11-2018 D3790_12995 2e91f3d65822b7ad671abc0a989f0dea 259 Pfam PF00899 ThiF family 10 243 4.5E-65 T 01-11-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 D3790_12995 2e91f3d65822b7ad671abc0a989f0dea 259 Gene3D G3DSA:3.40.50.720 2 249 1.1E-96 T 01-11-2018 D3790_12995 2e91f3d65822b7ad671abc0a989f0dea 259 SUPERFAMILY SSF69572 2 245 7.72E-83 T 01-11-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 D3790_16600 587f0498471453ddff6f2a06473f49cc 305 SUPERFAMILY SSF54637 155 297 3.57E-40 T 01-11-2018 IPR029069 HotDog domain superfamily D3790_16600 587f0498471453ddff6f2a06473f49cc 305 Gene3D G3DSA:3.40.630.30 2 145 2.1E-25 T 01-11-2018 D3790_16600 587f0498471453ddff6f2a06473f49cc 305 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 298 2.0E-49 T 01-11-2018 IPR012660 Thioesterase, putative D3790_16600 587f0498471453ddff6f2a06473f49cc 305 SUPERFAMILY SSF55729 2 145 1.06E-26 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_16600 587f0498471453ddff6f2a06473f49cc 305 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 158 297 4.5E-50 T 01-11-2018 IPR012660 Thioesterase, putative D3790_16600 587f0498471453ddff6f2a06473f49cc 305 Gene3D G3DSA:3.10.129.10 148 298 8.6E-46 T 01-11-2018 D3790_16600 587f0498471453ddff6f2a06473f49cc 305 Pfam PF00583 Acetyltransferase (GNAT) family 22 122 1.2E-13 T 01-11-2018 IPR000182 GNAT domain D3790_00815 881f698138b5a0986194878e6760f24c 923 Gene3D G3DSA:3.40.50.300 692 873 6.2E-18 T 01-11-2018 D3790_00815 881f698138b5a0986194878e6760f24c 923 Gene3D G3DSA:3.40.50.300 467 576 1.4E-7 T 01-11-2018 D3790_00815 881f698138b5a0986194878e6760f24c 923 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 15 913 0.0 T 01-11-2018 IPR022303 Conjugative transfer ATPase D3790_00815 881f698138b5a0986194878e6760f24c 923 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 26 297 1.2E-70 T 01-11-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase D3790_00815 881f698138b5a0986194878e6760f24c 923 SUPERFAMILY SSF52540 445 851 9.4E-33 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_02850 a06c05be4cfda51bebf086bebb34cc04 492 SUPERFAMILY SSF53720 6 485 7.72E-164 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D3790_02850 a06c05be4cfda51bebf086bebb34cc04 492 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 253 260 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 D3790_02850 a06c05be4cfda51bebf086bebb34cc04 492 Pfam PF00171 Aldehyde dehydrogenase family 20 481 1.3E-173 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D3790_02850 a06c05be4cfda51bebf086bebb34cc04 492 Gene3D G3DSA:3.40.309.10 257 487 1.9E-78 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D3790_02850 a06c05be4cfda51bebf086bebb34cc04 492 Gene3D G3DSA:3.40.605.10 3 256 8.4E-98 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D3790_02850 a06c05be4cfda51bebf086bebb34cc04 492 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 281 292 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 D3790_02850 a06c05be4cfda51bebf086bebb34cc04 492 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 479 3.0E-222 T 01-11-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 D3790_03075 208215a8909232d1b30dfda380e80ed7 117 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 34 113 1.3E-9 T 01-11-2018 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein D3790_01905 e4fc09a70c4bdf0bb82b3ecd04227db2 204 SUPERFAMILY SSF47413 7 68 1.97E-7 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_01905 e4fc09a70c4bdf0bb82b3ecd04227db2 204 Gene3D G3DSA:1.10.260.40 3 78 4.2E-8 T 01-11-2018 D3790_01475 e636c36b78cdf1b0c95cf42357764252 70 Pfam PF13693 Winged helix-turn-helix DNA-binding 5 68 1.4E-32 T 01-11-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain D3790_01475 e636c36b78cdf1b0c95cf42357764252 70 SUPERFAMILY SSF47413 3 68 1.8E-28 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_01475 e636c36b78cdf1b0c95cf42357764252 70 Gene3D G3DSA:1.10.260.40 1 70 3.6E-34 T 01-11-2018 D3790_09710 7a48afcfbd5419db2350facd16f7de2f 576 Pfam PF13654 AAA domain 119 316 2.7E-23 T 01-11-2018 D3790_09710 7a48afcfbd5419db2350facd16f7de2f 576 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 345 361 2.9E-10 T 01-11-2018 D3790_09710 7a48afcfbd5419db2350facd16f7de2f 576 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 458 477 2.9E-10 T 01-11-2018 D3790_09710 7a48afcfbd5419db2350facd16f7de2f 576 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 428 447 2.9E-10 T 01-11-2018 D3790_09710 7a48afcfbd5419db2350facd16f7de2f 576 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 488 506 2.9E-10 T 01-11-2018 D3790_09710 7a48afcfbd5419db2350facd16f7de2f 576 Gene3D G3DSA:3.40.50.300 64 233 2.0E-12 T 01-11-2018 D3790_09710 7a48afcfbd5419db2350facd16f7de2f 576 Gene3D G3DSA:3.30.230.10 321 561 2.4E-94 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3790_09710 7a48afcfbd5419db2350facd16f7de2f 576 SUPERFAMILY SSF54211 345 536 1.29E-36 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_09710 7a48afcfbd5419db2350facd16f7de2f 576 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 431 532 5.1E-10 T 01-11-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 D3790_00725 22b1cfed81c5ddc7845b17defe6c8d67 94 Pfam PF13693 Winged helix-turn-helix DNA-binding 9 82 2.6E-36 T 01-11-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain D3790_00725 22b1cfed81c5ddc7845b17defe6c8d67 94 SUPERFAMILY SSF47413 3 74 2.02E-28 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_00725 22b1cfed81c5ddc7845b17defe6c8d67 94 Gene3D G3DSA:1.10.260.40 3 74 1.2E-31 T 01-11-2018 D3790_13455 fd738b2242ffb87f7ae3f48b6ed66563 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 4.5E-24 T 01-11-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 D3790_13455 fd738b2242ffb87f7ae3f48b6ed66563 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 4.5E-24 T 01-11-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 D3790_13455 fd738b2242ffb87f7ae3f48b6ed66563 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 4.5E-24 T 01-11-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 D3790_13455 fd738b2242ffb87f7ae3f48b6ed66563 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 4.5E-24 T 01-11-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 D3790_13455 fd738b2242ffb87f7ae3f48b6ed66563 156 SUPERFAMILY SSF46785 3 76 2.99E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_13455 fd738b2242ffb87f7ae3f48b6ed66563 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 3.0E-26 T 01-11-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 D3790_13455 fd738b2242ffb87f7ae3f48b6ed66563 156 Gene3D G3DSA:3.30.1360.40 79 156 5.1E-30 T 01-11-2018 D3790_13455 fd738b2242ffb87f7ae3f48b6ed66563 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 1.1E-25 T 01-11-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 D3790_13455 fd738b2242ffb87f7ae3f48b6ed66563 156 Gene3D G3DSA:1.10.10.10 1 78 2.7E-34 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_13455 fd738b2242ffb87f7ae3f48b6ed66563 156 SUPERFAMILY SSF55252 82 151 3.01E-19 T 01-11-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 D3790_13455 fd738b2242ffb87f7ae3f48b6ed66563 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 152 2.1E-47 T 01-11-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 D3790_13455 fd738b2242ffb87f7ae3f48b6ed66563 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 9.8E-22 T 01-11-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 D3790_13455 fd738b2242ffb87f7ae3f48b6ed66563 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.502 T 01-11-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 D3790_00115 23e6edd650f054b65ef92e579d92b6fc 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 1.4E-20 T 01-11-2018 IPR025161 Putative transposase IS4/IS5 family D3790_00115 23e6edd650f054b65ef92e579d92b6fc 253 Pfam PF13586 Transposase DDE domain 163 248 5.7E-18 T 01-11-2018 IPR025668 Transposase DDE domain D3790_14920 23e6edd650f054b65ef92e579d92b6fc 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 1.4E-20 T 01-11-2018 IPR025161 Putative transposase IS4/IS5 family D3790_14920 23e6edd650f054b65ef92e579d92b6fc 253 Pfam PF13586 Transposase DDE domain 163 248 5.7E-18 T 01-11-2018 IPR025668 Transposase DDE domain D3790_17610 7e2db3d8d99b4afd5e7d1c8ba8a6a68a 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 01-11-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 D3790_17610 7e2db3d8d99b4afd5e7d1c8ba8a6a68a 130 Gene3D G3DSA:3.30.230.10 1 130 1.5E-53 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3790_17610 7e2db3d8d99b4afd5e7d1c8ba8a6a68a 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 6.4E-46 T 01-11-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 D3790_17610 7e2db3d8d99b4afd5e7d1c8ba8a6a68a 130 SUPERFAMILY SSF54211 5 130 2.05E-48 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_17610 7e2db3d8d99b4afd5e7d1c8ba8a6a68a 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.527 T 01-11-2018 IPR023035 Ribosomal protein S9, bacterial/plastid D3790_18265 27182715bac83ab69ea08f1ab41442d7 152 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 10 147 7.3E-70 T 01-11-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE D3790_18265 27182715bac83ab69ea08f1ab41442d7 152 Gene3D G3DSA:3.90.1010.10 3 150 7.2E-50 T 01-11-2018 D3790_18265 27182715bac83ab69ea08f1ab41442d7 152 Pfam PF02657 Fe-S metabolism associated domain 24 145 7.4E-41 T 01-11-2018 IPR003808 Fe-S metabolism associated domain, SufE-like D3790_18265 27182715bac83ab69ea08f1ab41442d7 152 SUPERFAMILY SSF82649 8 149 6.8E-46 T 01-11-2018 D3790_10535 a1607c175f5d6b9e397d3348729b119f 386 Pfam PF01888 CbiD 26 281 1.4E-91 T 01-11-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 D3790_10535 a1607c175f5d6b9e397d3348729b119f 386 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 25 375 29.755 T 01-11-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 D3790_10535 a1607c175f5d6b9e397d3348729b119f 386 SUPERFAMILY SSF111342 17 299 3.79E-83 T 01-11-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 D3790_10535 a1607c175f5d6b9e397d3348729b119f 386 Gene3D G3DSA:3.30.2110.10 27 196 7.6E-47 T 01-11-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 D3790_10535 a1607c175f5d6b9e397d3348729b119f 386 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 32 375 2.0E-83 T 01-11-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 D3790_10535 a1607c175f5d6b9e397d3348729b119f 386 PIRSF PIRSF026782 21 382 8.7E-124 T 01-11-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 D3790_07355 83c3505992c2185bf9328836cbfb9eac 322 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 308 1.4E-86 T 01-11-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 D3790_07355 83c3505992c2185bf9328836cbfb9eac 322 PIRSF PIRSF026649 13 317 4.6E-89 T 01-11-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 D3790_07355 83c3505992c2185bf9328836cbfb9eac 322 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 313 51.504 T 01-11-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 D3790_07355 83c3505992c2185bf9328836cbfb9eac 322 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 13 317 5.4E-127 T 01-11-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 D3790_13465 e44a67f66990942395fbd414bbb55497 334 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 194 4.4E-79 T 01-11-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D3790_13465 e44a67f66990942395fbd414bbb55497 334 SUPERFAMILY SSF56655 2 328 5.36E-111 T 01-11-2018 D3790_13465 e44a67f66990942395fbd414bbb55497 334 PIRSF PIRSF000904 1 333 2.0E-122 T 01-11-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D3790_13465 e44a67f66990942395fbd414bbb55497 334 Gene3D G3DSA:3.30.540.10 1 195 4.4E-74 T 01-11-2018 D3790_13465 e44a67f66990942395fbd414bbb55497 334 Gene3D G3DSA:3.40.190.80 197 334 5.8E-59 T 01-11-2018 D3790_13465 e44a67f66990942395fbd414bbb55497 334 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 330 42.42 T 01-11-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D3790_13465 e44a67f66990942395fbd414bbb55497 334 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 270 282 - T 01-11-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D3790_13465 e44a67f66990942395fbd414bbb55497 334 PIRSF PIRSF500210 1 332 8.5E-126 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D3790_13465 e44a67f66990942395fbd414bbb55497 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 5.9E-74 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D3790_13465 e44a67f66990942395fbd414bbb55497 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 5.9E-74 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D3790_13465 e44a67f66990942395fbd414bbb55497 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 5.9E-74 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D3790_13465 e44a67f66990942395fbd414bbb55497 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 304 329 5.9E-74 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D3790_13465 e44a67f66990942395fbd414bbb55497 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 5.9E-74 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D3790_13465 e44a67f66990942395fbd414bbb55497 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 5.9E-74 T 01-11-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D3790_09475 40975c4d155560539b687042c994e1bc 260 SUPERFAMILY SSF117143 94 222 3.53E-34 T 01-11-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like D3790_09475 40975c4d155560539b687042c994e1bc 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 1.1E-44 T 01-11-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G D3790_09475 40975c4d155560539b687042c994e1bc 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 3.9E-27 T 01-11-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G D3790_09475 40975c4d155560539b687042c994e1bc 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 5.3E-112 T 01-11-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 D3790_09475 40975c4d155560539b687042c994e1bc 260 Pfam PF00460 Flagella basal body rod protein 5 35 2.5E-12 T 01-11-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 D3790_09475 40975c4d155560539b687042c994e1bc 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 01-11-2018 IPR019776 Flagellar basal body rod protein, conserved site D3790_09475 40975c4d155560539b687042c994e1bc 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 1.1E-25 T 01-11-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D3790_14610 b09ee4ed89d16828414216360191aa1e 132 SUPERFAMILY SSF140931 5 91 6.54E-9 T 01-11-2018 IPR036597 Fido-like domain superfamily D3790_14610 b09ee4ed89d16828414216360191aa1e 132 PIRSF PIRSF018297 1 127 2.5E-39 T 01-11-2018 IPR006440 Death on curing protein GO:0016301 D3790_14610 b09ee4ed89d16828414216360191aa1e 132 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 5 120 9.4E-25 T 01-11-2018 IPR006440 Death on curing protein GO:0016301 D3790_14610 b09ee4ed89d16828414216360191aa1e 132 Gene3D G3DSA:1.20.120.1870 1 130 7.5E-44 T 01-11-2018 D3790_14610 b09ee4ed89d16828414216360191aa1e 132 Pfam PF02661 Fic/DOC family 3 84 1.3E-9 T 01-11-2018 IPR003812 Fido domain D3790_16310 33f1264005baabfe6f72bacf191c7412 680 SUPERFAMILY SSF55486 1 677 5.76E-202 T 01-11-2018 D3790_16310 33f1264005baabfe6f72bacf191c7412 680 Pfam PF01432 Peptidase family M3 222 677 1.4E-163 T 01-11-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 D3790_16310 33f1264005baabfe6f72bacf191c7412 680 Gene3D G3DSA:1.10.1370.40 13 675 4.4E-264 T 01-11-2018 D3790_16310 33f1264005baabfe6f72bacf191c7412 680 Gene3D G3DSA:1.10.1370.10 140 610 4.4E-264 T 01-11-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 D3790_03275 73c40939bbb8649f9af3b2f69c4eb33e 246 Gene3D G3DSA:1.10.3720.10 18 239 3.3E-43 T 01-11-2018 IPR035906 MetI-like superfamily D3790_03275 73c40939bbb8649f9af3b2f69c4eb33e 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 132 8.0E-16 T 01-11-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 D3790_03275 73c40939bbb8649f9af3b2f69c4eb33e 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 238 8.2E-26 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_03275 73c40939bbb8649f9af3b2f69c4eb33e 246 SUPERFAMILY SSF161098 24 223 5.23E-37 T 01-11-2018 IPR035906 MetI-like superfamily D3790_10400 fa525d0a36bdae2cbb1988010290e7bc 115 ProDom PD073252 TRANSPOSABLE STY4640 FELS-2 RETRON ORFC C0938 ELEMENT STY3664 EC67 PHAGE-RELATED 15 110 2.0E-22 T 01-11-2018 IPR035232 Protein of unknown function DUF5347 D3790_10400 fa525d0a36bdae2cbb1988010290e7bc 115 Pfam PF17282 Family of unknown function (DUF5347) 11 110 1.4E-40 T 01-11-2018 IPR035232 Protein of unknown function DUF5347 D3790_11885 8db2b24900ab02eee74ccbc5145b71f0 138 SUPERFAMILY SSF48013 3 131 4.71E-42 T 01-11-2018 IPR035926 NusB-like superfamily D3790_11885 8db2b24900ab02eee74ccbc5145b71f0 138 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 130 5.6E-45 T 01-11-2018 IPR011605 NusB antitermination factor GO:0006353 D3790_11885 8db2b24900ab02eee74ccbc5145b71f0 138 Pfam PF01029 NusB family 7 129 4.9E-35 T 01-11-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 D3790_11885 8db2b24900ab02eee74ccbc5145b71f0 138 Gene3D G3DSA:1.10.940.10 1 138 9.0E-51 T 01-11-2018 IPR035926 NusB-like superfamily D3790_11885 8db2b24900ab02eee74ccbc5145b71f0 138 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 4 135 23.37 T 01-11-2018 IPR011605 NusB antitermination factor GO:0006353 D3790_07960 c81c5c8e660510544f0072f0ec767e98 263 Gene3D G3DSA:3.40.50.150 44 260 5.6E-35 T 01-11-2018 D3790_07960 c81c5c8e660510544f0072f0ec767e98 263 Pfam PF13649 Methyltransferase domain 62 155 1.8E-17 T 01-11-2018 D3790_07960 c81c5c8e660510544f0072f0ec767e98 263 SUPERFAMILY SSF53335 26 236 1.82E-37 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_05590 7fa32accd94fe3b22e55240454d6e625 269 Pfam PF00005 ABC transporter 31 178 1.2E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_05590 7fa32accd94fe3b22e55240454d6e625 269 Gene3D G3DSA:3.40.50.300 2 266 1.3E-71 T 01-11-2018 D3790_05590 7fa32accd94fe3b22e55240454d6e625 269 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_05590 7fa32accd94fe3b22e55240454d6e625 269 SUPERFAMILY SSF52540 5 250 2.88E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05590 7fa32accd94fe3b22e55240454d6e625 269 SMART SM00382 39 228 5.2E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_14390 ab0d6d2814decedf2997be54a29dbc4f 287 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 204 214 - T 01-11-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 D3790_14390 ab0d6d2814decedf2997be54a29dbc4f 287 Pfam PF01177 Asp/Glu/Hydantoin racemase 28 239 2.6E-27 T 01-11-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 D3790_14390 ab0d6d2814decedf2997be54a29dbc4f 287 Hamap MF_00258 Glutamate racemase [murI]. 26 278 34.077 T 01-11-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 D3790_14390 ab0d6d2814decedf2997be54a29dbc4f 287 Gene3D G3DSA:3.40.50.1860 118 231 3.5E-91 T 01-11-2018 D3790_14390 ab0d6d2814decedf2997be54a29dbc4f 287 SUPERFAMILY SSF53681 28 128 1.63E-32 T 01-11-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 D3790_14390 ab0d6d2814decedf2997be54a29dbc4f 287 TIGRFAM TIGR00067 glut_race: glutamate racemase 28 264 4.3E-81 T 01-11-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 D3790_14390 ab0d6d2814decedf2997be54a29dbc4f 287 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 93 101 - T 01-11-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 D3790_14390 ab0d6d2814decedf2997be54a29dbc4f 287 Gene3D G3DSA:3.40.50.1860 30 264 3.5E-91 T 01-11-2018 D3790_14390 ab0d6d2814decedf2997be54a29dbc4f 287 SUPERFAMILY SSF53681 131 282 5.01E-34 T 01-11-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 D3790_10900 9d360254aa17e20d9020e9cbae05280d 134 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D3790_10900 9d360254aa17e20d9020e9cbae05280d 134 PRINTS PR00502 NUDIX hydrolase family signature 35 49 1.4E-7 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D3790_10900 9d360254aa17e20d9020e9cbae05280d 134 PRINTS PR00502 NUDIX hydrolase family signature 49 64 1.4E-7 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D3790_10900 9d360254aa17e20d9020e9cbae05280d 134 PRINTS PR01401 Mutator MutT protein signature 4 25 2.4E-12 T 01-11-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 D3790_10900 9d360254aa17e20d9020e9cbae05280d 134 PRINTS PR01401 Mutator MutT protein signature 79 92 2.4E-12 T 01-11-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 D3790_10900 9d360254aa17e20d9020e9cbae05280d 134 Gene3D G3DSA:3.90.79.10 4 130 2.8E-37 T 01-11-2018 D3790_10900 9d360254aa17e20d9020e9cbae05280d 134 Pfam PF00293 NUDIX domain 7 124 7.1E-19 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D3790_10900 9d360254aa17e20d9020e9cbae05280d 134 SUPERFAMILY SSF55811 3 128 1.62E-37 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D3790_10900 9d360254aa17e20d9020e9cbae05280d 134 TIGRFAM TIGR00586 mutt: mutator mutT protein 3 128 5.2E-49 T 01-11-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 D3790_06850 6df2f58e8a49b7b1c8e16a28328fc596 180 SUPERFAMILY SSF51182 68 175 6.88E-19 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily D3790_06850 6df2f58e8a49b7b1c8e16a28328fc596 180 SUPERFAMILY SSF47413 4 64 1.21E-17 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_06850 6df2f58e8a49b7b1c8e16a28328fc596 180 SMART SM00530 4 59 6.7E-17 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_06850 6df2f58e8a49b7b1c8e16a28328fc596 180 Gene3D G3DSA:2.60.120.10 71 176 7.7E-18 T 01-11-2018 IPR014710 RmlC-like jelly roll fold D3790_06850 6df2f58e8a49b7b1c8e16a28328fc596 180 Gene3D G3DSA:1.10.260.40 2 68 2.8E-18 T 01-11-2018 D3790_06850 6df2f58e8a49b7b1c8e16a28328fc596 180 Pfam PF07883 Cupin domain 106 174 6.2E-12 T 01-11-2018 IPR013096 Cupin 2, conserved barrel D3790_06850 6df2f58e8a49b7b1c8e16a28328fc596 180 Pfam PF01381 Helix-turn-helix 5 59 1.3E-17 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_15655 e83e6dd2fc6c0fcd2d2c440a8d6e7fb1 129 Gene3D G3DSA:3.40.50.1010 1 128 2.7E-33 T 01-11-2018 D3790_15655 e83e6dd2fc6c0fcd2d2c440a8d6e7fb1 129 Pfam PF01850 PIN domain 2 117 1.1E-12 T 01-11-2018 IPR002716 PIN domain D3790_15655 e83e6dd2fc6c0fcd2d2c440a8d6e7fb1 129 SUPERFAMILY SSF88723 1 127 1.04E-32 T 01-11-2018 IPR029060 PIN-like domain superfamily D3790_09280 8ccc66f7176112f55d5f16b2569c6bfc 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 3 103 3.2E-27 T 01-11-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 D3790_09280 8ccc66f7176112f55d5f16b2569c6bfc 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 5.3E-17 T 01-11-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 D3790_09280 8ccc66f7176112f55d5f16b2569c6bfc 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 5.3E-17 T 01-11-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 D3790_09280 8ccc66f7176112f55d5f16b2569c6bfc 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 5.3E-17 T 01-11-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 D3790_09280 8ccc66f7176112f55d5f16b2569c6bfc 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 25 103 1.2E-27 T 01-11-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 D3790_09280 8ccc66f7176112f55d5f16b2569c6bfc 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 103 18.056 T 01-11-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 D3790_06985 2b8567f5317b03095a285c9d702c78a7 205 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 11 205 4.9E-77 T 01-11-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent D3790_06985 2b8567f5317b03095a285c9d702c78a7 205 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 32 124 4.2E-14 T 01-11-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D3790_06985 2b8567f5317b03095a285c9d702c78a7 205 SUPERFAMILY SSF50475 31 167 2.89E-18 T 01-11-2018 D3790_06985 2b8567f5317b03095a285c9d702c78a7 205 Gene3D G3DSA:2.30.110.10 31 155 4.3E-20 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 D3790_11245 34b8d73e491f54bf27c0f001684f301f 306 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 293 1.7E-74 T 01-11-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 D3790_11245 34b8d73e491f54bf27c0f001684f301f 306 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 144 2.2E-26 T 01-11-2018 IPR013332 Ketopantoate reductase, N-terminal domain D3790_11245 34b8d73e491f54bf27c0f001684f301f 306 Gene3D G3DSA:1.10.1040.10 170 292 3.6E-43 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 D3790_11245 34b8d73e491f54bf27c0f001684f301f 306 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 171 291 3.8E-34 T 01-11-2018 IPR013752 Ketopantoate reductase, C-terminal domain D3790_11245 34b8d73e491f54bf27c0f001684f301f 306 Gene3D G3DSA:3.40.50.720 1 169 1.4E-54 T 01-11-2018 D3790_11245 34b8d73e491f54bf27c0f001684f301f 306 SUPERFAMILY SSF48179 171 291 9.18E-34 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D3790_11245 34b8d73e491f54bf27c0f001684f301f 306 SUPERFAMILY SSF51735 1 169 1.82E-56 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_14240 827cee8a6fd2f7e76ac0db9185ebd849 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.38 T 01-11-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 D3790_14240 827cee8a6fd2f7e76ac0db9185ebd849 274 SMART SM01382 124 251 2.1E-91 T 01-11-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 D3790_14240 827cee8a6fd2f7e76ac0db9185ebd849 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.6E-34 T 01-11-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14240 827cee8a6fd2f7e76ac0db9185ebd849 274 Gene3D G3DSA:2.40.50.140 1 114 1.2E-51 T 01-11-2018 D3790_14240 827cee8a6fd2f7e76ac0db9185ebd849 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 272 1.7E-131 T 01-11-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 D3790_14240 827cee8a6fd2f7e76ac0db9185ebd849 274 SMART SM01383 42 118 2.2E-48 T 01-11-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14240 827cee8a6fd2f7e76ac0db9185ebd849 274 SUPERFAMILY SSF50249 3 125 4.46E-50 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_14240 827cee8a6fd2f7e76ac0db9185ebd849 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 01-11-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14240 827cee8a6fd2f7e76ac0db9185ebd849 274 Gene3D G3DSA:2.30.30.30 115 195 5.2E-34 T 01-11-2018 IPR014722 Ribosomal protein L2, domain 2 D3790_14240 827cee8a6fd2f7e76ac0db9185ebd849 274 Gene3D G3DSA:4.10.950.10 196 273 1.1E-36 T 01-11-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14240 827cee8a6fd2f7e76ac0db9185ebd849 274 SUPERFAMILY SSF50104 127 269 1.26E-60 T 01-11-2018 IPR008991 Translation protein SH3-like domain superfamily D3790_14240 827cee8a6fd2f7e76ac0db9185ebd849 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 2.3E-56 T 01-11-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 D3790_14240 827cee8a6fd2f7e76ac0db9185ebd849 274 PIRSF PIRSF002158 12 274 2.7E-101 T 01-11-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_12030 37369bfba7ae016aae7477b244e60c52 262 Pfam PF00561 alpha/beta hydrolase fold 28 126 2.9E-8 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_12030 37369bfba7ae016aae7477b244e60c52 262 SUPERFAMILY SSF53474 26 261 2.43E-36 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_12030 37369bfba7ae016aae7477b244e60c52 262 Gene3D G3DSA:3.40.50.1820 10 260 3.1E-36 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_12030 37369bfba7ae016aae7477b244e60c52 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 4.3E-6 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_12030 37369bfba7ae016aae7477b244e60c52 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 4.3E-6 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_12030 37369bfba7ae016aae7477b244e60c52 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 4.3E-6 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_12030 37369bfba7ae016aae7477b244e60c52 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 207 221 4.3E-6 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_07165 9d82155df8b275c1a82610a6edf9b4f1 212 SUPERFAMILY SSF52218 1 201 2.68E-54 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_07165 9d82155df8b275c1a82610a6edf9b4f1 212 Pfam PF02525 Flavodoxin-like fold 3 197 1.1E-45 T 01-11-2018 IPR003680 Flavodoxin-like fold D3790_07165 9d82155df8b275c1a82610a6edf9b4f1 212 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 31.912 T 01-11-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 D3790_07165 9d82155df8b275c1a82610a6edf9b4f1 212 Gene3D G3DSA:3.40.50.360 2 201 5.1E-59 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_00945 f0d88ea8c845cde1f646e62571efb6e1 316 Pfam PF13592 Winged helix-turn helix 103 161 1.1E-16 T 01-11-2018 IPR025959 Winged helix-turn helix domain D3790_00945 f0d88ea8c845cde1f646e62571efb6e1 316 Pfam PF13358 DDE superfamily endonuclease 176 315 1.3E-35 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_00945 f0d88ea8c845cde1f646e62571efb6e1 316 Gene3D G3DSA:3.30.420.470 139 316 1.5E-16 T 01-11-2018 D3790_00945 f0d88ea8c845cde1f646e62571efb6e1 316 Pfam PF13384 Homeodomain-like domain 20 64 6.3E-11 T 01-11-2018 D3790_00945 f0d88ea8c845cde1f646e62571efb6e1 316 SUPERFAMILY SSF46689 16 136 1.52E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_06070 17798ad7d47946545bef4894d4b11f42 720 Gene3D G3DSA:3.55.50.10 96 186 1.3E-82 T 01-11-2018 D3790_06070 17798ad7d47946545bef4894d4b11f42 720 Gene3D G3DSA:2.30.110.50 13 330 1.3E-82 T 01-11-2018 D3790_06070 17798ad7d47946545bef4894d4b11f42 720 Pfam PF05954 Phage late control gene D protein (GPD) 24 328 2.5E-67 T 01-11-2018 D3790_06070 17798ad7d47946545bef4894d4b11f42 720 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 512 9.1E-112 T 01-11-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein D3790_06070 17798ad7d47946545bef4894d4b11f42 720 SUPERFAMILY SSF69279 10 181 7.65E-43 T 01-11-2018 D3790_06070 17798ad7d47946545bef4894d4b11f42 720 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 8 530 2.2E-150 T 01-11-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset D3790_06070 17798ad7d47946545bef4894d4b11f42 720 SUPERFAMILY SSF69279 185 371 1.24E-33 T 01-11-2018 D3790_06070 17798ad7d47946545bef4894d4b11f42 720 Gene3D G3DSA:3.30.1920.30 224 286 1.3E-82 T 01-11-2018 D3790_06070 17798ad7d47946545bef4894d4b11f42 720 SUPERFAMILY SSF69349 449 657 1.41E-33 T 01-11-2018 D3790_06070 17798ad7d47946545bef4894d4b11f42 720 Gene3D G3DSA:2.40.50.230 363 464 5.6E-39 T 01-11-2018 IPR037026 Vgr protein, OB-fold domain superfamily D3790_06070 17798ad7d47946545bef4894d4b11f42 720 SUPERFAMILY SSF69255 371 458 1.7E-30 T 01-11-2018 D3790_01325 b1dfa5abc75a4979aefcef69b582b8aa 635 Gene3D G3DSA:3.60.120.10 1 382 1.5E-115 T 01-11-2018 IPR005801 ADC synthase GO:0009058 D3790_01325 b1dfa5abc75a4979aefcef69b582b8aa 635 Pfam PF00117 Glutamine amidotransferase class-I 442 620 4.7E-17 T 01-11-2018 IPR017926 Glutamine amidotransferase D3790_01325 b1dfa5abc75a4979aefcef69b582b8aa 635 PRINTS PR00096 Glutamine amidotransferase superfamily signature 514 525 1.7E-6 T 01-11-2018 D3790_01325 b1dfa5abc75a4979aefcef69b582b8aa 635 PRINTS PR00096 Glutamine amidotransferase superfamily signature 599 612 1.7E-6 T 01-11-2018 D3790_01325 b1dfa5abc75a4979aefcef69b582b8aa 635 PRINTS PR00096 Glutamine amidotransferase superfamily signature 481 490 1.7E-6 T 01-11-2018 D3790_01325 b1dfa5abc75a4979aefcef69b582b8aa 635 Gene3D G3DSA:3.40.50.880 438 631 1.3E-36 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_01325 b1dfa5abc75a4979aefcef69b582b8aa 635 PRINTS PR00097 Anthranilate synthase component II signature 514 525 3.8E-5 T 01-11-2018 D3790_01325 b1dfa5abc75a4979aefcef69b582b8aa 635 PRINTS PR00097 Anthranilate synthase component II signature 440 454 3.8E-5 T 01-11-2018 D3790_01325 b1dfa5abc75a4979aefcef69b582b8aa 635 PRINTS PR00097 Anthranilate synthase component II signature 599 612 3.8E-5 T 01-11-2018 D3790_01325 b1dfa5abc75a4979aefcef69b582b8aa 635 Pfam PF00425 chorismate binding enzyme 115 372 8.5E-46 T 01-11-2018 IPR015890 Chorismate-utilising enzyme, C-terminal D3790_01325 b1dfa5abc75a4979aefcef69b582b8aa 635 SUPERFAMILY SSF52317 437 622 5.53E-23 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_01325 b1dfa5abc75a4979aefcef69b582b8aa 635 SUPERFAMILY SSF56322 91 380 1.07E-60 T 01-11-2018 IPR005801 ADC synthase GO:0009058 D3790_15230 c85aab8e6e82e00add323b6656c3fc63 491 Pfam PF14559 Tetratricopeptide repeat 124 178 4.7E-6 T 01-11-2018 D3790_15230 c85aab8e6e82e00add323b6656c3fc63 491 Pfam PF04575 Protein of unknown function (DUF560) 198 491 5.3E-56 T 01-11-2018 IPR007655 Protein of unknown function DUF560 D3790_15230 c85aab8e6e82e00add323b6656c3fc63 491 Gene3D G3DSA:1.25.40.10 113 192 7.7E-7 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_15230 c85aab8e6e82e00add323b6656c3fc63 491 SUPERFAMILY SSF48452 111 169 4.22E-5 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_00995 d4ffccab6891c072764e72b8d106325f 70 Pfam PF01385 Probable transposase 14 47 1.2E-7 T 01-11-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 D3790_19190 8bcb723d715542cd2ced42a85f4b74cf 330 Gene3D G3DSA:3.30.1220.10 216 328 4.4E-31 T 01-11-2018 IPR036627 CobW-like, C-terminal domain superfamily D3790_19190 8bcb723d715542cd2ced42a85f4b74cf 330 SMART SM00833 234 328 1.0E-10 T 01-11-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal D3790_19190 8bcb723d715542cd2ced42a85f4b74cf 330 SUPERFAMILY SSF52540 2 188 3.44E-43 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_19190 8bcb723d715542cd2ced42a85f4b74cf 330 Gene3D G3DSA:3.40.50.300 1 202 7.6E-69 T 01-11-2018 D3790_19190 8bcb723d715542cd2ced42a85f4b74cf 330 SUPERFAMILY SSF90002 234 327 4.71E-23 T 01-11-2018 D3790_19190 8bcb723d715542cd2ced42a85f4b74cf 330 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 234 326 1.8E-17 T 01-11-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal D3790_19190 8bcb723d715542cd2ced42a85f4b74cf 330 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 183 1.6E-49 T 01-11-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain D3790_13740 b4ce0481279236fe806fbc8b9327e3cc 332 Pfam PF12146 Serine aminopeptidase, S33 54 315 3.9E-48 T 01-11-2018 IPR022742 Serine aminopeptidase, S33 D3790_13740 b4ce0481279236fe806fbc8b9327e3cc 332 Gene3D G3DSA:3.40.50.1820 27 332 7.4E-39 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_13740 b4ce0481279236fe806fbc8b9327e3cc 332 SUPERFAMILY SSF53474 10 332 5.26E-35 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_07710 c1d3710d47c5e0d1aeb21670476d4477 189 Gene3D G3DSA:2.60.120.10 114 150 2.9E-25 T 01-11-2018 IPR014710 RmlC-like jelly roll fold D3790_07710 c1d3710d47c5e0d1aeb21670476d4477 189 Gene3D G3DSA:2.60.120.10 12 113 2.9E-25 T 01-11-2018 IPR014710 RmlC-like jelly roll fold D3790_07710 c1d3710d47c5e0d1aeb21670476d4477 189 Pfam PF05962 HutD 10 166 3.2E-41 T 01-11-2018 IPR010282 Uncharacterised protein family HutD/Ves D3790_07710 c1d3710d47c5e0d1aeb21670476d4477 189 SUPERFAMILY SSF51182 1 187 3.02E-40 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily D3790_13320 fbd2af09aae822ddd80506cc28d36a84 649 Pfam PF03880 DbpA RNA binding domain 494 563 1.3E-19 T 01-11-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain D3790_13320 fbd2af09aae822ddd80506cc28d36a84 649 Pfam PF00270 DEAD/DEAH box helicase 32 196 5.8E-51 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D3790_13320 fbd2af09aae822ddd80506cc28d36a84 649 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 01-11-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D3790_13320 fbd2af09aae822ddd80506cc28d36a84 649 SMART SM00487 26 224 2.8E-65 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_13320 fbd2af09aae822ddd80506cc28d36a84 649 Gene3D G3DSA:3.40.50.300 2 213 2.1E-77 T 01-11-2018 D3790_13320 fbd2af09aae822ddd80506cc28d36a84 649 Gene3D G3DSA:3.30.70.330 491 565 1.7E-9 T 01-11-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily D3790_13320 fbd2af09aae822ddd80506cc28d36a84 649 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 2 565 47.051 T 01-11-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 D3790_13320 fbd2af09aae822ddd80506cc28d36a84 649 SMART SM00490 260 341 5.0E-32 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_13320 fbd2af09aae822ddd80506cc28d36a84 649 SUPERFAMILY SSF52540 148 355 1.08E-51 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_13320 fbd2af09aae822ddd80506cc28d36a84 649 Gene3D G3DSA:3.40.50.300 218 434 3.1E-50 T 01-11-2018 D3790_13320 fbd2af09aae822ddd80506cc28d36a84 649 SUPERFAMILY SSF52540 5 210 1.84E-73 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_13320 fbd2af09aae822ddd80506cc28d36a84 649 Pfam PF00271 Helicase conserved C-terminal domain 233 341 3.4E-29 T 01-11-2018 IPR001650 Helicase, C-terminal D3790_17370 5ebc0df5d160d9cc68d24f5e74c9ca85 295 Pfam PF13612 Transposase DDE domain 104 258 6.3E-78 T 01-11-2018 IPR025668 Transposase DDE domain D3790_15840 313cfbae1e786a68b98e0fd0a63720bc 554 SUPERFAMILY SSF51445 5 472 4.77E-156 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily D3790_15840 313cfbae1e786a68b98e0fd0a63720bc 554 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 550 2.1E-257 T 01-11-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 D3790_15840 313cfbae1e786a68b98e0fd0a63720bc 554 Gene3D G3DSA:2.60.40.1180 476 551 3.4E-19 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta D3790_15840 313cfbae1e786a68b98e0fd0a63720bc 554 Pfam PF00128 Alpha amylase, catalytic domain 30 372 1.6E-123 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 D3790_15840 313cfbae1e786a68b98e0fd0a63720bc 554 SUPERFAMILY SSF51011 475 551 7.2E-20 T 01-11-2018 D3790_15840 313cfbae1e786a68b98e0fd0a63720bc 554 Gene3D G3DSA:3.20.20.80 7 467 2.0E-188 T 01-11-2018 D3790_15840 313cfbae1e786a68b98e0fd0a63720bc 554 Pfam PF11941 Domain of unknown function (DUF3459) 459 546 5.0E-8 T 01-11-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) D3790_15840 313cfbae1e786a68b98e0fd0a63720bc 554 Gene3D G3DSA:3.90.400.10 107 175 2.0E-188 T 01-11-2018 D3790_15840 313cfbae1e786a68b98e0fd0a63720bc 554 SMART SM00642 15 414 2.2E-155 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 D3790_17180 fed0d7e86e1e7a8003e16de747cce32f 199 Pfam PF07081 Protein of unknown function (DUF1349) 8 189 2.9E-64 T 01-11-2018 IPR009784 Protein of unknown function DUF1349 D3790_17180 fed0d7e86e1e7a8003e16de747cce32f 199 SUPERFAMILY SSF49899 7 188 4.35E-34 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D3790_17180 fed0d7e86e1e7a8003e16de747cce32f 199 Gene3D G3DSA:2.60.120.200 1 199 2.2E-59 T 01-11-2018 D3790_17180 fed0d7e86e1e7a8003e16de747cce32f 199 PIRSF PIRSF022704 1 199 9.9E-66 T 01-11-2018 IPR015987 Uncharacterised conserved protein UCP022704 D3790_05840 6fe730bcda16fdd11645212ba3f55802 127 SUPERFAMILY SSF101756 29 125 4.32E-35 T 01-11-2018 IPR036700 Bacterial OB-fold superfamily D3790_05840 6fe730bcda16fdd11645212ba3f55802 127 Gene3D G3DSA:2.40.50.200 20 127 1.9E-41 T 01-11-2018 IPR036700 Bacterial OB-fold superfamily D3790_05840 6fe730bcda16fdd11645212ba3f55802 127 Pfam PF04076 Bacterial OB fold (BOF) protein 23 124 6.0E-36 T 01-11-2018 IPR005220 Bacterial OB-fold D3790_05840 6fe730bcda16fdd11645212ba3f55802 127 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 1 125 9.1E-39 T 01-11-2018 IPR016052 Bacteriophage 933W, L0136 D3790_01200 be242206e1072bd207e8b88ce68f000c 357 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 1 357 59.659 T 01-11-2018 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 D3790_01200 be242206e1072bd207e8b88ce68f000c 357 Pfam PF01464 Transglycosylase SLT domain 195 319 6.1E-35 T 01-11-2018 IPR008258 Transglycosylase SLT domain 1 D3790_01200 be242206e1072bd207e8b88ce68f000c 357 Pfam PF11873 Domain of unknown function (DUF3393) 5 190 1.6E-76 T 01-11-2018 IPR024570 Murein transglycosylase-C, N-terminal D3790_01200 be242206e1072bd207e8b88ce68f000c 357 Gene3D G3DSA:1.10.530.10 178 354 1.6E-53 T 01-11-2018 D3790_01200 be242206e1072bd207e8b88ce68f000c 357 SUPERFAMILY SSF53955 190 356 8.45E-39 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily D3790_01200 be242206e1072bd207e8b88ce68f000c 357 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 212 240 - T 01-11-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 D3790_04085 8590c16d42dc6dee9f8b005b07f4e922 577 Pfam PF00884 Sulfatase 410 491 1.0E-11 T 01-11-2018 IPR000917 Sulfatase, N-terminal GO:0008484 D3790_04085 8590c16d42dc6dee9f8b005b07f4e922 577 Gene3D G3DSA:3.40.720.10 248 402 1.3E-8 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D3790_04085 8590c16d42dc6dee9f8b005b07f4e922 577 SUPERFAMILY SSF53649 257 551 3.49E-35 T 01-11-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D3790_04085 8590c16d42dc6dee9f8b005b07f4e922 577 PIRSF PIRSF004950 6 409 7.0E-152 T 01-11-2018 IPR012159 Inner membrane protein YejM D3790_04085 8590c16d42dc6dee9f8b005b07f4e922 577 PIRSF PIRSF004950 402 577 2.2E-53 T 01-11-2018 IPR012159 Inner membrane protein YejM D3790_04085 8590c16d42dc6dee9f8b005b07f4e922 577 Gene3D G3DSA:3.40.720.10 407 556 7.6E-16 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D3790_04085 8590c16d42dc6dee9f8b005b07f4e922 577 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 1.5E-106 T 01-11-2018 IPR024588 Inner membrane protein YejM, N-terminal D3790_14725 bd02b031a8e9f6239c25745d16c15d66 230 Gene3D G3DSA:3.40.140.10 107 230 1.6E-42 T 01-11-2018 D3790_14725 bd02b031a8e9f6239c25745d16c15d66 230 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 179 184 - T 01-11-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site D3790_14725 bd02b031a8e9f6239c25745d16c15d66 230 Hamap MF_00018 UPF0758 protein YicR [yicR]. 10 230 48.673 T 01-11-2018 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily D3790_14725 bd02b031a8e9f6239c25745d16c15d66 230 Pfam PF04002 RadC-like JAB domain 110 228 4.3E-42 T 01-11-2018 IPR025657 RadC-like JAB domain D3790_14725 bd02b031a8e9f6239c25745d16c15d66 230 TIGRFAM TIGR00608 radc: DNA repair protein RadC 18 230 3.0E-78 T 01-11-2018 IPR001405 Uncharacterised protein family UPF0758 D3790_14725 bd02b031a8e9f6239c25745d16c15d66 230 SUPERFAMILY SSF47781 22 93 1.37E-9 T 01-11-2018 IPR010994 RuvA domain 2-like D3790_02460 c96f0dec0aaf8316f41c2422cad667e0 496 Gene3D G3DSA:3.30.300.20 385 467 4.5E-19 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta D3790_02460 c96f0dec0aaf8316f41c2422cad667e0 496 Hamap MF_00195 GTPase Der [der]. 2 468 39.32 T 01-11-2018 IPR016484 GTP-binding protein EngA GO:0005525 D3790_02460 c96f0dec0aaf8316f41c2422cad667e0 496 Pfam PF01926 50S ribosome-binding GTPase 212 329 5.8E-24 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_02460 c96f0dec0aaf8316f41c2422cad667e0 496 Pfam PF01926 50S ribosome-binding GTPase 5 119 3.2E-27 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_02460 c96f0dec0aaf8316f41c2422cad667e0 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 210 372 2.4E-22 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D3790_02460 c96f0dec0aaf8316f41c2422cad667e0 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 2.3E-23 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D3790_02460 c96f0dec0aaf8316f41c2422cad667e0 496 Gene3D G3DSA:3.40.50.300 2 160 1.6E-43 T 01-11-2018 D3790_02460 c96f0dec0aaf8316f41c2422cad667e0 496 SMART SM00382 208 355 0.057 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_02460 c96f0dec0aaf8316f41c2422cad667e0 496 SMART SM00382 1 173 6.5 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_02460 c96f0dec0aaf8316f41c2422cad667e0 496 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 385 465 3.3E-25 T 01-11-2018 IPR032859 GTPase Der, C-terminal KH-domain-like D3790_02460 c96f0dec0aaf8316f41c2422cad667e0 496 Gene3D G3DSA:3.40.50.300 207 383 4.3E-48 T 01-11-2018 D3790_02460 c96f0dec0aaf8316f41c2422cad667e0 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.3E-9 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_02460 c96f0dec0aaf8316f41c2422cad667e0 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 1.3E-9 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 D3790_02460 c96f0dec0aaf8316f41c2422cad667e0 496 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 465 1.7E-180 T 01-11-2018 IPR016484 GTP-binding protein EngA GO:0005525 D3790_02460 c96f0dec0aaf8316f41c2422cad667e0 496 PIRSF PIRSF006485 1 473 4.1E-181 T 01-11-2018 IPR016484 GTP-binding protein EngA GO:0005525 D3790_02460 c96f0dec0aaf8316f41c2422cad667e0 496 SUPERFAMILY SSF52540 137 471 3.62E-60 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_02460 c96f0dec0aaf8316f41c2422cad667e0 496 SUPERFAMILY SSF52540 4 182 8.39E-46 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09480 da748f0e5bb9207b9272f7b4a80480a8 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 170 247 2.6E-22 T 01-11-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D3790_09480 da748f0e5bb9207b9272f7b4a80480a8 251 SUPERFAMILY SSF117143 77 209 1.83E-14 T 01-11-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like D3790_09480 da748f0e5bb9207b9272f7b4a80480a8 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 2.7E-31 T 01-11-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G D3790_09480 da748f0e5bb9207b9272f7b4a80480a8 251 Pfam PF00460 Flagella basal body rod protein 5 35 6.6E-9 T 01-11-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 D3790_07310 df0e73c98b8b808ae436fb5aca0890ae 114 Pfam PF01042 Endoribonuclease L-PSP 3 113 4.2E-24 T 01-11-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 D3790_07310 df0e73c98b8b808ae436fb5aca0890ae 114 Gene3D G3DSA:3.30.1330.40 1 114 2.7E-33 T 01-11-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 D3790_07310 df0e73c98b8b808ae436fb5aca0890ae 114 SUPERFAMILY SSF55298 1 113 1.38E-25 T 01-11-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 D3790_10515 bee689f25db39f8d0f69a170261bf17b 359 SUPERFAMILY SSF159672 14 244 7.19E-57 T 01-11-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 D3790_10515 bee689f25db39f8d0f69a170261bf17b 359 Pfam PF11760 Cobalamin synthesis G N-terminal 60 140 1.6E-36 T 01-11-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 D3790_10515 bee689f25db39f8d0f69a170261bf17b 359 Gene3D G3DSA:3.40.50.11220 16 135 1.6E-32 T 01-11-2018 D3790_10515 bee689f25db39f8d0f69a170261bf17b 359 Gene3D G3DSA:3.30.420.180 228 357 7.5E-31 T 01-11-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 D3790_10515 bee689f25db39f8d0f69a170261bf17b 359 Pfam PF01890 Cobalamin synthesis G C-terminus 237 352 2.3E-25 T 01-11-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 D3790_10515 bee689f25db39f8d0f69a170261bf17b 359 SUPERFAMILY SSF159664 230 356 5.1E-31 T 01-11-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 D3790_07330 0cc1ccc8144c57e3b5babc45834a0982 282 SUPERFAMILY SSF46689 1 80 4.84E-21 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_07330 0cc1ccc8144c57e3b5babc45834a0982 282 Gene3D G3DSA:3.40.50.10490 94 276 1.9E-42 T 01-11-2018 D3790_07330 0cc1ccc8144c57e3b5babc45834a0982 282 SUPERFAMILY SSF53697 92 277 5.87E-43 T 01-11-2018 D3790_07330 0cc1ccc8144c57e3b5babc45834a0982 282 Pfam PF01380 SIS domain 124 252 2.8E-24 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 D3790_07330 0cc1ccc8144c57e3b5babc45834a0982 282 Gene3D G3DSA:1.10.10.10 1 79 5.7E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_07330 0cc1ccc8144c57e3b5babc45834a0982 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 3.9E-29 T 01-11-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 D3790_04800 7c7765160b27963f7c463c94c4ba9399 598 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 49 176 9.2E-41 T 01-11-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04800 7c7765160b27963f7c463c94c4ba9399 598 Gene3D G3DSA:1.10.645.20 213 598 4.2E-144 T 01-11-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04800 7c7765160b27963f7c463c94c4ba9399 598 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 137 158 - T 01-11-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04800 7c7765160b27963f7c463c94c4ba9399 598 SUPERFAMILY SSF143243 24 228 2.48E-58 T 01-11-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04800 7c7765160b27963f7c463c94c4ba9399 598 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 328 598 1.0E-103 T 01-11-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04800 7c7765160b27963f7c463c94c4ba9399 598 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 251 262 - T 01-11-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04800 7c7765160b27963f7c463c94c4ba9399 598 SUPERFAMILY SSF56762 224 598 6.28E-123 T 01-11-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04800 7c7765160b27963f7c463c94c4ba9399 598 Gene3D G3DSA:3.30.460.80 2 156 1.4E-34 T 01-11-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04800 7c7765160b27963f7c463c94c4ba9399 598 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 210 598 42.039 T 01-11-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04800 7c7765160b27963f7c463c94c4ba9399 598 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 48 175 2.1E-43 T 01-11-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04800 7c7765160b27963f7c463c94c4ba9399 598 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 15 598 72.292 T 01-11-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 D3790_04800 7c7765160b27963f7c463c94c4ba9399 598 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 104 158 3.0E-21 T 01-11-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04800 7c7765160b27963f7c463c94c4ba9399 598 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 214 598 1.3E-175 T 01-11-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_14025 59b4e516b8b0b17d9bbc51cd9d295f06 278 SUPERFAMILY SSF46785 2 83 7.82E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_14025 59b4e516b8b0b17d9bbc51cd9d295f06 278 SUPERFAMILY SSF53850 90 272 2.17E-16 T 01-11-2018 D3790_14025 59b4e516b8b0b17d9bbc51cd9d295f06 278 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.7E-20 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_14025 59b4e516b8b0b17d9bbc51cd9d295f06 278 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_14025 59b4e516b8b0b17d9bbc51cd9d295f06 278 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_14025 59b4e516b8b0b17d9bbc51cd9d295f06 278 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_14025 59b4e516b8b0b17d9bbc51cd9d295f06 278 Gene3D G3DSA:1.10.10.10 1 84 3.4E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_14025 59b4e516b8b0b17d9bbc51cd9d295f06 278 Gene3D G3DSA:3.40.190.290 89 275 1.1E-9 T 01-11-2018 D3790_14025 59b4e516b8b0b17d9bbc51cd9d295f06 278 Pfam PF03466 LysR substrate binding domain 89 269 1.3E-14 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_14025 59b4e516b8b0b17d9bbc51cd9d295f06 278 Hamap MF_01233 HTH-type transcriptional regulator HdfR [hdfR]. 1 272 49.545 T 01-11-2018 IPR020890 Transcription regulator HTH, HdfR GO:0003677|GO:0003700|GO:0045892 D3790_02275 43fc9f0dafe2142f056456ab7921f52a 213 SUPERFAMILY SSF48150 26 207 2.51E-29 T 01-11-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 D3790_02275 43fc9f0dafe2142f056456ab7921f52a 213 Gene3D G3DSA:1.10.1670.40 13 205 6.2E-31 T 01-11-2018 D3790_02275 43fc9f0dafe2142f056456ab7921f52a 213 SMART SM00478 45 209 1.7E-4 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 D3790_02275 43fc9f0dafe2142f056456ab7921f52a 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 43 188 8.3E-6 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 D3790_02275 43fc9f0dafe2142f056456ab7921f52a 213 Gene3D G3DSA:1.10.340.30 33 156 6.2E-31 T 01-11-2018 D3790_17340 4aeaa5b51ada293eac77f0c3d5bb7427 432 Pfam PF07804 HipA-like C-terminal domain 148 397 2.5E-50 T 01-11-2018 IPR012893 HipA-like, C-terminal D3790_17340 4aeaa5b51ada293eac77f0c3d5bb7427 432 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 3 103 6.9E-32 T 01-11-2018 IPR017508 HipA, N-terminal subdomain 1 D3790_17340 4aeaa5b51ada293eac77f0c3d5bb7427 432 Pfam PF13657 HipA N-terminal domain 5 103 9.4E-26 T 01-11-2018 IPR017508 HipA, N-terminal subdomain 1 D3790_04220 22c508818c06f9757495d4637d5bcd38 477 SUPERFAMILY SSF55874 313 468 1.83E-26 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_04220 22c508818c06f9757495d4637d5bcd38 477 SMART SM00388 247 312 5.5E-9 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_04220 22c508818c06f9757495d4637d5bcd38 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 465 2.4E-13 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_04220 22c508818c06f9757495d4637d5bcd38 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 3.7E-6 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_04220 22c508818c06f9757495d4637d5bcd38 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 412 3.7E-6 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_04220 22c508818c06f9757495d4637d5bcd38 477 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 309 4.2E-9 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_04220 22c508818c06f9757495d4637d5bcd38 477 SMART SM00387 359 474 1.5E-22 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_04220 22c508818c06f9757495d4637d5bcd38 477 Gene3D G3DSA:1.10.287.130 198 310 1.9E-18 T 01-11-2018 D3790_04220 22c508818c06f9757495d4637d5bcd38 477 SMART SM00304 194 246 0.0018 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D3790_04220 22c508818c06f9757495d4637d5bcd38 477 SUPERFAMILY SSF47384 230 310 1.77E-13 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D3790_04220 22c508818c06f9757495d4637d5bcd38 477 Gene3D G3DSA:3.30.565.10 311 472 7.3E-25 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_04220 22c508818c06f9757495d4637d5bcd38 477 Pfam PF08521 Two-component sensor kinase N-terminal 22 170 1.2E-39 T 01-11-2018 IPR013727 Two-component sensor kinase, N-terminal D3790_08250 103f7d9e6d4cbfd90a01c3ebd8fc77d0 357 Gene3D G3DSA:3.40.1570.10 82 339 1.8E-125 T 01-11-2018 D3790_08250 103f7d9e6d4cbfd90a01c3ebd8fc77d0 357 Pfam PF05171 Haemin-degrading HemS.ChuX domain 207 345 9.9E-37 T 01-11-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 D3790_08250 103f7d9e6d4cbfd90a01c3ebd8fc77d0 357 Pfam PF05171 Haemin-degrading HemS.ChuX domain 29 157 6.0E-40 T 01-11-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 D3790_08250 103f7d9e6d4cbfd90a01c3ebd8fc77d0 357 SUPERFAMILY SSF144064 5 347 2.55E-126 T 01-11-2018 D3790_08250 103f7d9e6d4cbfd90a01c3ebd8fc77d0 357 Gene3D G3DSA:3.40.1570.10 13 288 1.8E-125 T 01-11-2018 D3790_15170 72b9b69dd5f4b52116937ebf2b03e16e 549 Pfam PF00884 Sulfatase 262 454 1.8E-14 T 01-11-2018 IPR000917 Sulfatase, N-terminal GO:0008484 D3790_15170 72b9b69dd5f4b52116937ebf2b03e16e 549 SUPERFAMILY SSF53649 262 452 3.11E-11 T 01-11-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D3790_15170 72b9b69dd5f4b52116937ebf2b03e16e 549 Gene3D G3DSA:3.40.720.10 209 483 1.0E-22 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D3790_06100 2f45406792f0b335a149d9f6ef381774 93 Pfam PF07023 Protein of unknown function (DUF1315) 5 81 1.9E-26 T 01-11-2018 IPR009749 Protein of unknown function DUF1315 D3790_04665 3682b6d0e2d3bb8b70f197ba5ecf2578 678 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 55 670 1.9E-273 T 01-11-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0043708 D3790_04665 3682b6d0e2d3bb8b70f197ba5ecf2578 678 SUPERFAMILY SSF88713 72 331 5.34E-41 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 D3790_04665 3682b6d0e2d3bb8b70f197ba5ecf2578 678 Gene3D G3DSA:3.20.20.80 315 678 2.0E-144 T 01-11-2018 D3790_04665 3682b6d0e2d3bb8b70f197ba5ecf2578 678 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 324 651 5.9E-150 T 01-11-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal D3790_04665 3682b6d0e2d3bb8b70f197ba5ecf2578 678 Gene3D G3DSA:3.20.20.370 48 314 6.1E-76 T 01-11-2018 D3790_04665 3682b6d0e2d3bb8b70f197ba5ecf2578 678 Pfam PF01522 Polysaccharide deacetylase 109 276 6.1E-30 T 01-11-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 D3790_11865 5b33f88cf7e5599a5d7252d8c8dd429d 338 Pfam PF06166 Protein of unknown function (DUF979) 5 337 4.1E-126 T 01-11-2018 IPR009323 Protein of unknown function DUF979 D3790_19220 69407bf27f86d34c5d023ae305bc1993 538 Pfam PF01609 Transposase DDE domain 156 461 1.4E-13 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_19220 69407bf27f86d34c5d023ae305bc1993 538 Pfam PF14104 Domain of unknown function (DUF4277) 8 113 5.8E-42 T 01-11-2018 IPR025457 Domain of unknown function DUF4277 D3790_19220 69407bf27f86d34c5d023ae305bc1993 538 SUPERFAMILY SSF53098 396 484 1.74E-6 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_04040 a598d3a280bf72a02d0ad0142c943d92 1534 Pfam PF03527 RHS protein 1270 1304 3.4E-7 T 01-11-2018 IPR001826 RHS protein D3790_04040 a598d3a280bf72a02d0ad0142c943d92 1534 Pfam PF05593 RHS Repeat 639 674 2.8E-11 T 01-11-2018 IPR031325 RHS repeat D3790_04040 a598d3a280bf72a02d0ad0142c943d92 1534 Pfam PF05593 RHS Repeat 618 647 1.2E-4 T 01-11-2018 IPR031325 RHS repeat D3790_04040 a598d3a280bf72a02d0ad0142c943d92 1534 Pfam PF05593 RHS Repeat 1094 1144 1.4E-4 T 01-11-2018 IPR031325 RHS repeat D3790_04040 a598d3a280bf72a02d0ad0142c943d92 1534 Pfam PF05593 RHS Repeat 1134 1167 3.6E-5 T 01-11-2018 IPR031325 RHS repeat D3790_04040 a598d3a280bf72a02d0ad0142c943d92 1534 Pfam PF05593 RHS Repeat 753 786 7.5E-5 T 01-11-2018 IPR031325 RHS repeat D3790_04040 a598d3a280bf72a02d0ad0142c943d92 1534 Pfam PF05593 RHS Repeat 834 869 6.3E-5 T 01-11-2018 IPR031325 RHS repeat D3790_04040 a598d3a280bf72a02d0ad0142c943d92 1534 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 834 874 6.1E-6 T 01-11-2018 IPR006530 YD repeat D3790_04040 a598d3a280bf72a02d0ad0142c943d92 1534 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1159 1189 2.2E-6 T 01-11-2018 IPR006530 YD repeat D3790_04040 a598d3a280bf72a02d0ad0142c943d92 1534 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 556 595 9.7E-6 T 01-11-2018 IPR006530 YD repeat D3790_04040 a598d3a280bf72a02d0ad0142c943d92 1534 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 752 789 1.3E-5 T 01-11-2018 IPR006530 YD repeat D3790_04040 a598d3a280bf72a02d0ad0142c943d92 1534 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 702 742 0.0028 T 01-11-2018 IPR006530 YD repeat D3790_04040 a598d3a280bf72a02d0ad0142c943d92 1534 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 513 547 0.003 T 01-11-2018 IPR006530 YD repeat D3790_04040 a598d3a280bf72a02d0ad0142c943d92 1534 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 660 701 1.3E-6 T 01-11-2018 IPR006530 YD repeat D3790_04040 a598d3a280bf72a02d0ad0142c943d92 1534 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 618 659 4.0E-7 T 01-11-2018 IPR006530 YD repeat D3790_04040 a598d3a280bf72a02d0ad0142c943d92 1534 Gene3D G3DSA:3.90.930.1 607 751 2.4E-13 T 01-11-2018 D3790_04040 a598d3a280bf72a02d0ad0142c943d92 1534 Gene3D G3DSA:2.180.10.10 834 1153 2.0E-9 T 01-11-2018 D3790_04040 a598d3a280bf72a02d0ad0142c943d92 1534 Gene3D G3DSA:2.180.10.10 1154 1379 2.2E-33 T 01-11-2018 D3790_04040 a598d3a280bf72a02d0ad0142c943d92 1534 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1298 1379 3.6E-23 T 01-11-2018 IPR022385 Rhs repeat-associated core GO:0097264 D3790_09490 b8488b98238ce3d7dc5e0c4a3fea19a8 233 Pfam PF03963 Flagellar hook capping protein - N-terminal region 13 81 4.1E-23 T 01-11-2018 IPR005648 Flagellar hook capping protein D3790_09490 b8488b98238ce3d7dc5e0c4a3fea19a8 233 Gene3D G3DSA:2.60.40.4070 106 199 2.6E-33 T 01-11-2018 D3790_09490 b8488b98238ce3d7dc5e0c4a3fea19a8 233 Pfam PF13860 FlgD Ig-like domain 122 189 1.9E-24 T 01-11-2018 IPR025965 FlgD Ig-like domain D3790_09490 b8488b98238ce3d7dc5e0c4a3fea19a8 233 Pfam PF13861 FlgD Tudor-like domain 89 230 5.1E-14 T 01-11-2018 IPR025963 FlgD Tudor-like domain D3790_09490 b8488b98238ce3d7dc5e0c4a3fea19a8 233 Gene3D G3DSA:2.30.30.910 90 227 2.6E-33 T 01-11-2018 D3790_03265 1de69c6ae87c699b827c1a2fa5db15a7 241 Pfam PF00005 ABC transporter 17 165 2.3E-35 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_03265 1de69c6ae87c699b827c1a2fa5db15a7 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_03265 1de69c6ae87c699b827c1a2fa5db15a7 241 Gene3D G3DSA:3.40.50.300 1 241 2.8E-76 T 01-11-2018 D3790_03265 1de69c6ae87c699b827c1a2fa5db15a7 241 PIRSF PIRSF039085 1 241 7.6E-106 T 01-11-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 D3790_03265 1de69c6ae87c699b827c1a2fa5db15a7 241 SMART SM00382 26 208 1.6E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_03265 1de69c6ae87c699b827c1a2fa5db15a7 241 SUPERFAMILY SSF52540 1 235 5.08E-77 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_18145 3458e5886d3b18bed9b9069549215530 534 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 255 3.8E-9 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_18145 3458e5886d3b18bed9b9069549215530 534 Gene3D G3DSA:1.10.3720.10 288 533 2.7E-25 T 01-11-2018 IPR035906 MetI-like superfamily D3790_18145 3458e5886d3b18bed9b9069549215530 534 Gene3D G3DSA:1.10.3720.10 8 268 2.1E-43 T 01-11-2018 IPR035906 MetI-like superfamily D3790_18145 3458e5886d3b18bed9b9069549215530 534 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 525 2.5E-233 T 01-11-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 D3790_18145 3458e5886d3b18bed9b9069549215530 534 SUPERFAMILY SSF161098 285 528 1.09E-31 T 01-11-2018 IPR035906 MetI-like superfamily D3790_18145 3458e5886d3b18bed9b9069549215530 534 SUPERFAMILY SSF161098 14 264 6.32E-43 T 01-11-2018 IPR035906 MetI-like superfamily D3790_01145 6c713172174c3abe5aef4676224e2fb3 432 Gene3D G3DSA:3.30.499.20 4 275 3.8E-95 T 01-11-2018 D3790_01145 6c713172174c3abe5aef4676224e2fb3 432 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 430 1.1E-124 T 01-11-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 D3790_01145 6c713172174c3abe5aef4676224e2fb3 432 Gene3D G3DSA:3.30.499.10 278 432 3.0E-47 T 01-11-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 D3790_01145 6c713172174c3abe5aef4676224e2fb3 432 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 429 2.5E-130 T 01-11-2018 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 D3790_01145 6c713172174c3abe5aef4676224e2fb3 432 Pfam PF00330 Aconitase family (aconitate hydratase) 74 423 7.2E-80 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D3790_01145 6c713172174c3abe5aef4676224e2fb3 432 SUPERFAMILY SSF53732 1 431 1.83E-121 T 01-11-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 D3790_01145 6c713172174c3abe5aef4676224e2fb3 432 PRINTS PR00415 Aconitase family signature 361 374 6.3E-17 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D3790_01145 6c713172174c3abe5aef4676224e2fb3 432 PRINTS PR00415 Aconitase family signature 119 132 6.3E-17 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D3790_01145 6c713172174c3abe5aef4676224e2fb3 432 PRINTS PR00415 Aconitase family signature 209 222 6.3E-17 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D3790_01145 6c713172174c3abe5aef4676224e2fb3 432 PRINTS PR00415 Aconitase family signature 195 208 6.3E-17 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D3790_01145 6c713172174c3abe5aef4676224e2fb3 432 PRINTS PR00415 Aconitase family signature 133 148 6.3E-17 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D3790_06625 ac366635b28b71ac01817a4aa7095897 208 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 26.928 T 01-11-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 D3790_06625 ac366635b28b71ac01817a4aa7095897 208 PIRSF PIRSF006091 1 205 4.7E-74 T 01-11-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 D3790_06625 ac366635b28b71ac01817a4aa7095897 208 Pfam PF04205 FMN-binding domain 100 187 6.0E-19 T 01-11-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 D3790_06625 ac366635b28b71ac01817a4aa7095897 208 SMART SM00900 100 192 5.9E-37 T 01-11-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 D3790_06625 ac366635b28b71ac01817a4aa7095897 208 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 4.6E-67 T 01-11-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 D3790_04270 4982a87e3567cc9bcfc024d1afef8e3e 361 PIRSF PIRSF001456 3 356 7.4E-139 T 01-11-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D3790_04270 4982a87e3567cc9bcfc024d1afef8e3e 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 01-11-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D3790_04270 4982a87e3567cc9bcfc024d1afef8e3e 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.181 T 01-11-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D3790_04270 4982a87e3567cc9bcfc024d1afef8e3e 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 01-11-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D3790_04270 4982a87e3567cc9bcfc024d1afef8e3e 361 Pfam PF01264 Chorismate synthase 10 345 2.6E-141 T 01-11-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D3790_04270 4982a87e3567cc9bcfc024d1afef8e3e 361 SUPERFAMILY SSF103263 4 351 4.58E-147 T 01-11-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D3790_04270 4982a87e3567cc9bcfc024d1afef8e3e 361 Gene3D G3DSA:3.60.150.10 1 360 1.5E-156 T 01-11-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D3790_04270 4982a87e3567cc9bcfc024d1afef8e3e 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 4.3E-138 T 01-11-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D3790_04270 4982a87e3567cc9bcfc024d1afef8e3e 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 01-11-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D3790_01355 fd19298b65abd05bd5b9eefefa488c26 477 Pfam PF07690 Major Facilitator Superfamily 12 408 6.3E-36 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_01355 fd19298b65abd05bd5b9eefefa488c26 477 SUPERFAMILY SSF103473 4 459 6.15E-53 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_01910 8a5074990c919c6927ae1428e20087c7 281 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 86 277 7.0E-33 T 01-11-2018 IPR003744 Queuosine precursor transporter GO:1990397 D3790_01910 8a5074990c919c6927ae1428e20087c7 281 Hamap MF_02088 Probable queuosine precursor transporter. 74 280 14.402 T 01-11-2018 IPR003744 Queuosine precursor transporter GO:1990397 D3790_01910 8a5074990c919c6927ae1428e20087c7 281 Pfam PF02592 Putative vitamin uptake transporter 113 270 2.3E-37 T 01-11-2018 IPR003744 Queuosine precursor transporter GO:1990397 D3790_10020 1aa5664702fabb22460dfe7ce925898b 238 Gene3D G3DSA:1.10.3720.10 1 232 2.3E-47 T 01-11-2018 IPR035906 MetI-like superfamily D3790_10020 1aa5664702fabb22460dfe7ce925898b 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 230 2.2E-14 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_10020 1aa5664702fabb22460dfe7ce925898b 238 SUPERFAMILY SSF161098 7 216 7.33E-37 T 01-11-2018 IPR035906 MetI-like superfamily D3790_10020 1aa5664702fabb22460dfe7ce925898b 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 4 79 3.5E-12 T 01-11-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 D3790_10560 5f3ef121b99ed496a9a9ded5628d447d 357 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 4 350 4.0E-103 T 01-11-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 D3790_10560 5f3ef121b99ed496a9a9ded5628d447d 357 Gene3D G3DSA:3.90.1150.10 22 350 5.3E-117 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_10560 5f3ef121b99ed496a9a9ded5628d447d 357 Gene3D G3DSA:3.40.640.10 34 259 5.3E-117 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_10560 5f3ef121b99ed496a9a9ded5628d447d 357 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 210 223 - T 01-11-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 D3790_10560 5f3ef121b99ed496a9a9ded5628d447d 357 Pfam PF00155 Aminotransferase class I and II 21 348 4.5E-42 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D3790_10560 5f3ef121b99ed496a9a9ded5628d447d 357 SUPERFAMILY SSF53383 3 351 2.09E-76 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_05225 f7e523b4ff8272bc5dbaf76f1ced7b73 234 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_05225 f7e523b4ff8272bc5dbaf76f1ced7b73 234 Pfam PF00005 ABC transporter 26 174 8.3E-36 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_05225 f7e523b4ff8272bc5dbaf76f1ced7b73 234 Gene3D G3DSA:3.40.50.300 5 230 8.5E-65 T 01-11-2018 D3790_05225 f7e523b4ff8272bc5dbaf76f1ced7b73 234 SUPERFAMILY SSF52540 7 226 4.54E-68 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05225 f7e523b4ff8272bc5dbaf76f1ced7b73 234 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 6 225 1.3E-107 T 01-11-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 D3790_05225 f7e523b4ff8272bc5dbaf76f1ced7b73 234 SMART SM00382 35 224 8.7E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_15960 d365ce4d5e1d4a155394424069d6d322 325 Pfam PF03631 Virulence factor BrkB 61 322 5.7E-45 T 01-11-2018 IPR017039 Virulence factor BrkB D3790_15960 d365ce4d5e1d4a155394424069d6d322 325 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 48 322 1.7E-114 T 01-11-2018 IPR005274 Inner membrane protein YhjD D3790_15960 d365ce4d5e1d4a155394424069d6d322 325 PIRSF PIRSF035875 41 325 1.9E-23 T 01-11-2018 IPR017039 Virulence factor BrkB D3790_10970 e92fe4929c6f252a5b86477e03dc41cb 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.845 T 01-11-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_10970 e92fe4929c6f252a5b86477e03dc41cb 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 01-11-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_10970 e92fe4929c6f252a5b86477e03dc41cb 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 01-11-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_10970 e92fe4929c6f252a5b86477e03dc41cb 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 360 5.2E-157 T 01-11-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_10970 e92fe4929c6f252a5b86477e03dc41cb 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 01-11-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_10970 e92fe4929c6f252a5b86477e03dc41cb 360 Pfam PF00953 Glycosyl transferase family 4 99 284 1.6E-35 T 01-11-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 D3790_02575 645828150209e63264341840726814d1 101 Pfam PF01526 Tn3 transposase DDE domain 5 64 1.7E-14 T 01-11-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 D3790_02960 da97c63e922bc10e115f3eb74ef23d9d 519 Pfam PF04262 Glutamate-cysteine ligase 10 380 1.8E-174 T 01-11-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 D3790_02960 da97c63e922bc10e115f3eb74ef23d9d 519 Gene3D G3DSA:3.30.590.20 18 518 1.8E-192 T 01-11-2018 D3790_02960 da97c63e922bc10e115f3eb74ef23d9d 519 SUPERFAMILY SSF55931 4 514 1.24E-202 T 01-11-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 D3790_02960 da97c63e922bc10e115f3eb74ef23d9d 519 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 514 7.1E-245 T 01-11-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 D3790_02960 da97c63e922bc10e115f3eb74ef23d9d 519 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 519 218.794 T 01-11-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 D3790_13395 90090631bb11ccbcefabe5ebdb9063b3 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 2.9E-94 T 01-11-2018 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 D3790_13395 90090631bb11ccbcefabe5ebdb9063b3 209 SUPERFAMILY SSF53335 31 207 5.16E-44 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_13395 90090631bb11ccbcefabe5ebdb9063b3 209 Gene3D G3DSA:3.40.50.150 30 208 3.0E-61 T 01-11-2018 D3790_13395 90090631bb11ccbcefabe5ebdb9063b3 209 PIRSF PIRSF005461 1 209 4.1E-81 T 01-11-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 D3790_13395 90090631bb11ccbcefabe5ebdb9063b3 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 8.9E-58 T 01-11-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 D3790_13395 90090631bb11ccbcefabe5ebdb9063b3 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 27.719 T 01-11-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 D3790_07020 367bc1b1b49c9f1715dd44dc94a10b8e 281 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 9 259 9.4E-32 T 01-11-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 D3790_07020 367bc1b1b49c9f1715dd44dc94a10b8e 281 SUPERFAMILY SSF51197 3 258 2.56E-35 T 01-11-2018 D3790_07020 367bc1b1b49c9f1715dd44dc94a10b8e 281 Gene3D G3DSA:3.60.130.10 1 272 2.3E-36 T 01-11-2018 D3790_09470 2c2224235275fd0acff806f949d56f88 263 Pfam PF02107 Flagellar L-ring protein 78 262 4.0E-58 T 01-11-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 D3790_09470 2c2224235275fd0acff806f949d56f88 263 Hamap MF_00415 Flagellar L-ring protein [flgH]. 33 261 26.23 T 01-11-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 D3790_09470 2c2224235275fd0acff806f949d56f88 263 PRINTS PR01008 Flagellar L-ring protein signature 240 254 6.9E-33 T 01-11-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 D3790_09470 2c2224235275fd0acff806f949d56f88 263 PRINTS PR01008 Flagellar L-ring protein signature 177 192 6.9E-33 T 01-11-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 D3790_09470 2c2224235275fd0acff806f949d56f88 263 PRINTS PR01008 Flagellar L-ring protein signature 203 219 6.9E-33 T 01-11-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 D3790_09470 2c2224235275fd0acff806f949d56f88 263 PRINTS PR01008 Flagellar L-ring protein signature 224 238 6.9E-33 T 01-11-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 D3790_09470 2c2224235275fd0acff806f949d56f88 263 PRINTS PR01008 Flagellar L-ring protein signature 104 116 6.9E-33 T 01-11-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 D3790_00990 cb3e31d60081eab3b8499b1abab5a66b 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 1.7E-47 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D3790_00990 cb3e31d60081eab3b8499b1abab5a66b 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 9.9E-170 T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D3790_00990 cb3e31d60081eab3b8499b1abab5a66b 664 Gene3D G3DSA:3.40.50.920 538 664 1.1E-43 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D3790_00990 cb3e31d60081eab3b8499b1abab5a66b 664 SUPERFAMILY SSF52518 4 328 6.16E-119 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_00990 cb3e31d60081eab3b8499b1abab5a66b 664 SUPERFAMILY SSF52922 533 664 4.06E-44 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D3790_00990 cb3e31d60081eab3b8499b1abab5a66b 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D3790_00990 cb3e31d60081eab3b8499b1abab5a66b 664 SMART SM00861 355 525 3.9E-69 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D3790_00990 cb3e31d60081eab3b8499b1abab5a66b 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 663 0.0 T 01-11-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 D3790_00990 cb3e31d60081eab3b8499b1abab5a66b 664 Gene3D G3DSA:3.40.50.970 2 326 1.7E-134 T 01-11-2018 D3790_00990 cb3e31d60081eab3b8499b1abab5a66b 664 Pfam PF02780 Transketolase, C-terminal domain 549 655 1.6E-18 T 01-11-2018 IPR033248 Transketolase, C-terminal domain D3790_00990 cb3e31d60081eab3b8499b1abab5a66b 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 01-11-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D3790_00990 cb3e31d60081eab3b8499b1abab5a66b 664 SUPERFAMILY SSF52518 331 525 3.54E-69 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_00990 cb3e31d60081eab3b8499b1abab5a66b 664 Gene3D G3DSA:3.40.50.970 327 537 9.2E-85 T 01-11-2018 D3790_03800 e30b3fda03b7335fee78086df0be8489 425 SUPERFAMILY SSF103473 28 421 2.22E-84 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_03800 e30b3fda03b7335fee78086df0be8489 425 Pfam PF07690 Major Facilitator Superfamily 43 286 4.3E-36 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_03800 e30b3fda03b7335fee78086df0be8489 425 ProSitePatterns PS00217 Sugar transport proteins signature 2. 130 155 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 D3790_03800 e30b3fda03b7335fee78086df0be8489 425 Gene3D G3DSA:1.20.1250.20 31 425 1.2E-88 T 01-11-2018 D3790_03800 e30b3fda03b7335fee78086df0be8489 425 ProSitePatterns PS00216 Sugar transport proteins signature 1. 294 309 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 D3790_17720 2463852cdee5202019c808ba0f4a8f69 93 Pfam PF13997 YqjK-like protein 13 85 4.3E-27 T 01-11-2018 IPR025612 YqjK-like protein D3790_05480 b4bfc73a8c8d06ead07b21b1522cd0cd 348 Gene3D G3DSA:3.30.530.50 101 213 1.4E-38 T 01-11-2018 D3790_05480 b4bfc73a8c8d06ead07b21b1522cd0cd 348 PIRSF PIRSF026343 9 345 8.5E-109 T 01-11-2018 IPR014524 Outer membrane protein assembly factor BamC D3790_05480 b4bfc73a8c8d06ead07b21b1522cd0cd 348 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 343 39.489 T 01-11-2018 IPR014524 Outer membrane protein assembly factor BamC D3790_05480 b4bfc73a8c8d06ead07b21b1522cd0cd 348 Gene3D G3DSA:3.30.310.170 226 348 1.5E-47 T 01-11-2018 D3790_05480 b4bfc73a8c8d06ead07b21b1522cd0cd 348 Pfam PF06804 NlpB/DapX lipoprotein 40 342 1.7E-109 T 01-11-2018 IPR010653 NlpB/DapX lipoprotein D3790_16575 d2ae78ce7b643849c70848df85b42f5b 235 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 36.152 T 01-11-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 D3790_16575 d2ae78ce7b643849c70848df85b42f5b 235 Pfam PF00588 SpoU rRNA Methylase family 20 159 4.0E-36 T 01-11-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 D3790_16575 d2ae78ce7b643849c70848df85b42f5b 235 Gene3D G3DSA:3.40.1280.10 1 205 5.1E-61 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D3790_16575 d2ae78ce7b643849c70848df85b42f5b 235 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 217 8.8E-22 T 01-11-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 D3790_16575 d2ae78ce7b643849c70848df85b42f5b 235 SUPERFAMILY SSF75217 4 174 7.85E-48 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases D3790_16255 7d87d31aa46bfad11305e57be90a522a 318 SUPERFAMILY SSF161098 28 304 6.07E-33 T 01-11-2018 IPR035906 MetI-like superfamily D3790_16255 7d87d31aa46bfad11305e57be90a522a 318 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 311 8.3E-93 T 01-11-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 D3790_16255 7d87d31aa46bfad11305e57be90a522a 318 Gene3D G3DSA:1.10.3720.10 68 316 5.0E-32 T 01-11-2018 IPR035906 MetI-like superfamily D3790_16255 7d87d31aa46bfad11305e57be90a522a 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 308 8.1E-18 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_12490 540f73751eeff02fbb7509cb172ce1f0 157 Pfam PF13551 Winged helix-turn helix 30 90 2.8E-11 T 01-11-2018 D3790_12490 540f73751eeff02fbb7509cb172ce1f0 157 SUPERFAMILY SSF46689 19 132 8.96E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_02085 233561fa3c8b9a2447d0fd74a243b810 346 Pfam PF13358 DDE superfamily endonuclease 177 310 7.4E-29 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_02085 233561fa3c8b9a2447d0fd74a243b810 346 SUPERFAMILY SSF46689 14 136 9.68E-11 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_02085 233561fa3c8b9a2447d0fd74a243b810 346 Pfam PF13592 Winged helix-turn helix 108 156 7.4E-6 T 01-11-2018 IPR025959 Winged helix-turn helix domain D3790_02085 233561fa3c8b9a2447d0fd74a243b810 346 Gene3D G3DSA:3.30.420.470 144 329 1.1E-12 T 01-11-2018 D3790_02085 233561fa3c8b9a2447d0fd74a243b810 346 Pfam PF13384 Homeodomain-like domain 25 72 2.0E-9 T 01-11-2018 D3790_02085 233561fa3c8b9a2447d0fd74a243b810 346 SUPERFAMILY SSF53098 207 319 2.85E-8 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_15335 c804d07a750312f1e2498ecc20dead46 651 Gene3D G3DSA:3.40.50.12780 51 515 1.2E-105 T 01-11-2018 D3790_15335 c804d07a750312f1e2498ecc20dead46 651 Pfam PF00501 AMP-binding enzyme 83 522 3.5E-93 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_15335 c804d07a750312f1e2498ecc20dead46 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_15335 c804d07a750312f1e2498ecc20dead46 651 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 1.8E-19 T 01-11-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 D3790_15335 c804d07a750312f1e2498ecc20dead46 651 SUPERFAMILY SSF56801 13 643 1.96E-186 T 01-11-2018 D3790_15335 c804d07a750312f1e2498ecc20dead46 651 Gene3D G3DSA:3.30.300.30 518 651 6.3E-33 T 01-11-2018 D3790_15335 c804d07a750312f1e2498ecc20dead46 651 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 01-11-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 D3790_15335 c804d07a750312f1e2498ecc20dead46 651 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 9.4E-26 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_15335 c804d07a750312f1e2498ecc20dead46 651 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.755 T 01-11-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 D3790_03495 6962770c675ffad56dd6d3d06a106eac 289 Gene3D G3DSA:1.20.1600.10 37 250 1.1E-40 T 01-11-2018 D3790_03495 6962770c675ffad56dd6d3d06a106eac 289 SUPERFAMILY SSF56954 10 243 3.4E-38 T 01-11-2018 D3790_03495 6962770c675ffad56dd6d3d06a106eac 289 Pfam PF02321 Outer membrane efflux protein 38 236 2.8E-19 T 01-11-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D3790_02255 511fc2332bb6f6bc508b9d8cf4cc9e87 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 3.0E-99 T 01-11-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 D3790_02255 511fc2332bb6f6bc508b9d8cf4cc9e87 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 237 7.4E-102 T 01-11-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 D3790_02255 511fc2332bb6f6bc508b9d8cf4cc9e87 243 SUPERFAMILY SSF63892 4 242 9.94E-99 T 01-11-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 D3790_02255 511fc2332bb6f6bc508b9d8cf4cc9e87 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 128.147 T 01-11-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 D3790_02255 511fc2332bb6f6bc508b9d8cf4cc9e87 243 Gene3D G3DSA:3.20.20.70 1 243 1.0E-104 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_03825 023bed4255053196587dfbb9aab086df 328 Gene3D G3DSA:2.130.10.10 1 327 6.5E-112 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D3790_03825 023bed4255053196587dfbb9aab086df 328 SUPERFAMILY SSF50974 4 288 5.49E-47 T 01-11-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 D3790_03825 023bed4255053196587dfbb9aab086df 328 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 328 52.537 T 01-11-2018 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 D3790_03825 023bed4255053196587dfbb9aab086df 328 Pfam PF10282 Lactonase, 7-bladed beta-propeller 7 324 8.4E-80 T 01-11-2018 IPR019405 Lactonase, 7-bladed beta propeller D3790_19690 7299f1aeec8d281c37fe06099adeb5ae 225 Gene3D G3DSA:3.30.70.1200 1 84 2.9E-7 T 01-11-2018 D3790_19690 7299f1aeec8d281c37fe06099adeb5ae 225 Gene3D G3DSA:3.30.70.1210 85 225 2.1E-27 T 01-11-2018 D3790_19690 7299f1aeec8d281c37fe06099adeb5ae 225 TIGRFAM TIGR01907 casE_Cse3: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI 1 223 1.4E-54 T 01-11-2018 IPR010179 CRISPR-associated protein Cse3 D3790_19690 7299f1aeec8d281c37fe06099adeb5ae 225 SMART SM01101 1 224 2.6E-76 T 01-11-2018 IPR010179 CRISPR-associated protein Cse3 D3790_19690 7299f1aeec8d281c37fe06099adeb5ae 225 Pfam PF08798 CRISPR associated protein 1 223 4.6E-50 T 01-11-2018 IPR010179 CRISPR-associated protein Cse3 D3790_19690 7299f1aeec8d281c37fe06099adeb5ae 225 SUPERFAMILY SSF117987 1 69 1.86E-8 T 01-11-2018 D3790_19690 7299f1aeec8d281c37fe06099adeb5ae 225 SUPERFAMILY SSF117987 85 223 4.45E-26 T 01-11-2018 D3790_16750 8216658fd10092d93311a725d83a1628 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.656 T 01-11-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 D3790_16750 8216658fd10092d93311a725d83a1628 234 Gene3D G3DSA:3.40.50.790 68 159 5.0E-81 T 01-11-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich D3790_16750 8216658fd10092d93311a725d83a1628 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 9.3E-108 T 01-11-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 D3790_16750 8216658fd10092d93311a725d83a1628 234 Gene3D G3DSA:3.30.190.20 21 225 5.0E-81 T 01-11-2018 D3790_16750 8216658fd10092d93311a725d83a1628 234 SUPERFAMILY SSF56808 6 225 4.06E-83 T 01-11-2018 IPR023674 Ribosomal protein L1-like D3790_16750 8216658fd10092d93311a725d83a1628 234 PIRSF PIRSF002155 1 227 1.2E-79 T 01-11-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_16750 8216658fd10092d93311a725d83a1628 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 4.0E-52 T 01-11-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein D3790_16750 8216658fd10092d93311a725d83a1628 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 01-11-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_07240 41b72fb7700265005ee63dd2ff1e8a31 226 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 103 1.9E-29 T 01-11-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 D3790_07240 41b72fb7700265005ee63dd2ff1e8a31 226 Gene3D G3DSA:2.160.20.70 117 226 1.8E-29 T 01-11-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 D3790_07240 41b72fb7700265005ee63dd2ff1e8a31 226 SUPERFAMILY SSF63848 120 225 1.44E-30 T 01-11-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 D3790_07240 41b72fb7700265005ee63dd2ff1e8a31 226 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 122 223 3.4E-30 T 01-11-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 D3790_07240 41b72fb7700265005ee63dd2ff1e8a31 226 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 225 7.8E-65 T 01-11-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 D3790_07240 41b72fb7700265005ee63dd2ff1e8a31 226 Gene3D G3DSA:3.30.750.120 1 115 3.6E-36 T 01-11-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily D3790_07240 41b72fb7700265005ee63dd2ff1e8a31 226 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 226 27.291 T 01-11-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 D3790_08850 e176b0328adb977f91ba57dd90767f4e 540 SUPERFAMILY SSF47170 40 174 6.41E-31 T 01-11-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily D3790_08850 e176b0328adb977f91ba57dd90767f4e 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 1.7E-78 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D3790_08850 e176b0328adb977f91ba57dd90767f4e 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 1.7E-78 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D3790_08850 e176b0328adb977f91ba57dd90767f4e 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.7E-78 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D3790_08850 e176b0328adb977f91ba57dd90767f4e 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 190 210 1.7E-78 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D3790_08850 e176b0328adb977f91ba57dd90767f4e 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 1.7E-78 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D3790_08850 e176b0328adb977f91ba57dd90767f4e 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 1.7E-78 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D3790_08850 e176b0328adb977f91ba57dd90767f4e 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 1.7E-78 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D3790_08850 e176b0328adb977f91ba57dd90767f4e 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 482 9.5E-57 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D3790_08850 e176b0328adb977f91ba57dd90767f4e 540 Gene3D G3DSA:1.20.120.30 22 188 7.9E-29 T 01-11-2018 D3790_08850 e176b0328adb977f91ba57dd90767f4e 540 Gene3D G3DSA:1.10.287.950 214 516 1.1E-91 T 01-11-2018 D3790_08850 e176b0328adb977f91ba57dd90767f4e 540 Pfam PF02203 Tar ligand binding domain homologue 1 170 1.7E-32 T 01-11-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 D3790_08850 e176b0328adb977f91ba57dd90767f4e 540 SMART SM00304 214 266 1.2E-8 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D3790_08850 e176b0328adb977f91ba57dd90767f4e 540 SMART SM00283 267 514 8.1E-91 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D3790_08850 e176b0328adb977f91ba57dd90767f4e 540 SMART SM00319 44 181 7.6E-13 T 01-11-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 D3790_08850 e176b0328adb977f91ba57dd90767f4e 540 SUPERFAMILY SSF58104 236 515 8.11E-74 T 01-11-2018 D3790_08305 f43b62dc160015fc16c34c5eea8aae28 136 Gene3D G3DSA:1.10.3730.20 31 130 5.9E-6 T 01-11-2018 D3790_08305 f43b62dc160015fc16c34c5eea8aae28 136 SUPERFAMILY SSF103481 35 128 7.45E-13 T 01-11-2018 D3790_08305 f43b62dc160015fc16c34c5eea8aae28 136 Pfam PF00892 EamA-like transporter family 2 124 3.7E-6 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D3790_08305 f43b62dc160015fc16c34c5eea8aae28 136 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 2 129 21.956 T 01-11-2018 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF D3790_00730 bd4267f62af97df7465a17daeb83beb0 178 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 58 160 8.7E-39 T 01-11-2018 IPR022260 Integrating conjugative element protein PilL, PFGI-1 D3790_08515 02c1c61ca6c15a333284eeb497e0ab6f 60 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 58 19.72 T 01-11-2018 IPR005371 Uncharacterised protein family UPF0181 D3790_08515 02c1c61ca6c15a333284eeb497e0ab6f 60 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 1.0E-26 T 01-11-2018 IPR005371 Uncharacterised protein family UPF0181 D3790_08515 02c1c61ca6c15a333284eeb497e0ab6f 60 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 6.0E-15 T 01-11-2018 IPR005371 Uncharacterised protein family UPF0181 D3790_15075 881dc805ddc953c0d386434304cae802 166 PIRSF PIRSF034445 1 166 1.8E-32 T 01-11-2018 IPR012899 LTXXQ motif family protein GO:0042597 D3790_15075 881dc805ddc953c0d386434304cae802 166 Pfam PF07813 LTXXQ motif family protein 65 155 6.9E-14 T 01-11-2018 IPR012899 LTXXQ motif family protein GO:0042597 D3790_15075 881dc805ddc953c0d386434304cae802 166 Gene3D G3DSA:1.20.120.1490 60 166 4.2E-27 T 01-11-2018 D3790_05730 bfaba1bbc60afa1a1f06a82082107e58 133 SUPERFAMILY SSF51316 3 125 8.58E-36 T 01-11-2018 IPR011057 Mss4-like superfamily D3790_05730 bfaba1bbc60afa1a1f06a82082107e58 133 Gene3D G3DSA:2.170.150.70 2 115 3.0E-16 T 01-11-2018 D3790_05730 bfaba1bbc60afa1a1f06a82082107e58 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 108 1.8E-14 T 01-11-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 D3790_03395 4b12cb8003f69b6f2d447ec61cead2bc 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 169 1.7E-74 T 01-11-2018 IPR010086 Flavodoxin, long chain GO:0010181 D3790_03395 4b12cb8003f69b6f2d447ec61cead2bc 177 Pfam PF00258 Flavodoxin 6 161 1.9E-32 T 01-11-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 D3790_03395 4b12cb8003f69b6f2d447ec61cead2bc 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 01-11-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 D3790_03395 4b12cb8003f69b6f2d447ec61cead2bc 177 Gene3D G3DSA:3.40.50.360 2 177 1.1E-56 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_03395 4b12cb8003f69b6f2d447ec61cead2bc 177 SUPERFAMILY SSF52218 4 171 1.95E-52 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_03395 4b12cb8003f69b6f2d447ec61cead2bc 177 PIRSF PIRSF038996 1 173 1.6E-70 T 01-11-2018 IPR010086 Flavodoxin, long chain GO:0010181 D3790_18345 0eef0f942e496c4297cb6212d8285361 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 01-11-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_18345 0eef0f942e496c4297cb6212d8285361 250 Gene3D G3DSA:3.30.2350.10 3 235 3.0E-61 T 01-11-2018 D3790_18345 0eef0f942e496c4297cb6212d8285361 250 Pfam PF00849 RNA pseudouridylate synthase 10 170 1.1E-31 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_18345 0eef0f942e496c4297cb6212d8285361 250 SUPERFAMILY SSF55120 2 237 7.36E-63 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_11915 a2febd12ef108ad966013d0ad5dd161b 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 61 79 6.2E-17 T 01-11-2018 IPR003849 Preprotein translocase YajC D3790_11915 a2febd12ef108ad966013d0ad5dd161b 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 23 43 6.2E-17 T 01-11-2018 IPR003849 Preprotein translocase YajC D3790_11915 a2febd12ef108ad966013d0ad5dd161b 112 SMART SM01323 21 104 5.5E-40 T 01-11-2018 IPR003849 Preprotein translocase YajC D3790_11915 a2febd12ef108ad966013d0ad5dd161b 112 Pfam PF02699 Preprotein translocase subunit 25 101 1.5E-27 T 01-11-2018 IPR003849 Preprotein translocase YajC D3790_11915 a2febd12ef108ad966013d0ad5dd161b 112 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 23 104 1.4E-33 T 01-11-2018 IPR003849 Preprotein translocase YajC D3790_01120 7a35d1fa6bf886e9aa11bbb2d3b43369 273 SUPERFAMILY SSF51735 4 162 2.48E-41 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_01120 7a35d1fa6bf886e9aa11bbb2d3b43369 273 SUPERFAMILY SSF48179 163 271 2.04E-29 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D3790_01120 7a35d1fa6bf886e9aa11bbb2d3b43369 273 Gene3D G3DSA:1.10.3730.10 166 273 1.3E-34 T 01-11-2018 D3790_01120 7a35d1fa6bf886e9aa11bbb2d3b43369 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 269 2.5E-74 T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 D3790_01120 7a35d1fa6bf886e9aa11bbb2d3b43369 273 Gene3D G3DSA:3.40.50.720 2 165 1.4E-52 T 01-11-2018 D3790_01120 7a35d1fa6bf886e9aa11bbb2d3b43369 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 269 25.102 T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 D3790_01120 7a35d1fa6bf886e9aa11bbb2d3b43369 273 PIRSF PIRSF000193 3 271 2.2E-76 T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 D3790_01120 7a35d1fa6bf886e9aa11bbb2d3b43369 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 269 1.1E-29 T 01-11-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 D3790_01120 7a35d1fa6bf886e9aa11bbb2d3b43369 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 100 1.7E-22 T 01-11-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal D3790_19615 b1e3655ddfb01d6d15556420e8a5fdf3 317 Pfam PF16220 Domain of unknown function (DUF4880) 14 54 1.7E-10 T 01-11-2018 IPR032623 FecR, N-terminal D3790_19615 b1e3655ddfb01d6d15556420e8a5fdf3 317 Gene3D G3DSA:2.60.120.1440 100 240 2.7E-17 T 01-11-2018 D3790_19615 b1e3655ddfb01d6d15556420e8a5fdf3 317 PIRSF PIRSF018266 5 317 7.0E-83 T 01-11-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component D3790_19615 b1e3655ddfb01d6d15556420e8a5fdf3 317 Gene3D G3DSA:3.55.50.30 242 312 3.1E-6 T 01-11-2018 D3790_19615 b1e3655ddfb01d6d15556420e8a5fdf3 317 Pfam PF16344 Domain of unknown function (DUF4974) 219 305 6.4E-9 T 01-11-2018 IPR032508 Protein FecR, C-terminal D3790_19615 b1e3655ddfb01d6d15556420e8a5fdf3 317 Pfam PF04773 FecR protein 110 203 4.5E-19 T 01-11-2018 IPR006860 FecR protein D3790_05520 ad7808b245ad5d7f1b4e2b7f8f28e739 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 7.1E-173 T 01-11-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 D3790_05520 ad7808b245ad5d7f1b4e2b7f8f28e739 375 Gene3D G3DSA:3.40.630.10 8 362 3.3E-126 T 01-11-2018 D3790_05520 ad7808b245ad5d7f1b4e2b7f8f28e739 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 51.75 T 01-11-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 D3790_05520 ad7808b245ad5d7f1b4e2b7f8f28e739 375 Gene3D G3DSA:3.30.70.360 179 292 3.3E-126 T 01-11-2018 D3790_05520 ad7808b245ad5d7f1b4e2b7f8f28e739 375 SUPERFAMILY SSF53187 5 373 4.28E-62 T 01-11-2018 D3790_05520 ad7808b245ad5d7f1b4e2b7f8f28e739 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 5.0E-43 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 D3790_05520 ad7808b245ad5d7f1b4e2b7f8f28e739 375 Pfam PF07687 Peptidase dimerisation domain 175 282 4.3E-24 T 01-11-2018 IPR011650 Peptidase M20, dimerisation domain D3790_05520 ad7808b245ad5d7f1b4e2b7f8f28e739 375 SUPERFAMILY SSF55031 179 286 2.24E-26 T 01-11-2018 IPR036264 Bacterial exopeptidase dimerisation domain D3790_00775 ebb36a0c9d6771a55077b5208e64b2f6 78 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 2 78 1.4E-24 T 01-11-2018 IPR021676 Protein of unknown function DUF3262 D3790_00775 ebb36a0c9d6771a55077b5208e64b2f6 78 Pfam PF11660 Protein of unknown function (DUF3262) 1 77 7.0E-28 T 01-11-2018 IPR021676 Protein of unknown function DUF3262 D3790_00320 ebb36a0c9d6771a55077b5208e64b2f6 78 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 2 78 1.4E-24 T 01-11-2018 IPR021676 Protein of unknown function DUF3262 D3790_00320 ebb36a0c9d6771a55077b5208e64b2f6 78 Pfam PF11660 Protein of unknown function (DUF3262) 1 77 7.0E-28 T 01-11-2018 IPR021676 Protein of unknown function DUF3262 D3790_01640 8fc21ce203c53d7da74ec673f9f1f954 997 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 522 528 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D3790_01640 8fc21ce203c53d7da74ec673f9f1f954 997 SUPERFAMILY SSF53335 231 632 1.42E-55 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_01640 8fc21ce203c53d7da74ec673f9f1f954 997 Pfam PF07669 Eco57I restriction-modification methylase 519 632 1.1E-15 T 01-11-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 D3790_01640 8fc21ce203c53d7da74ec673f9f1f954 997 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 519 531 8.9E-14 T 01-11-2018 D3790_01640 8fc21ce203c53d7da74ec673f9f1f954 997 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 557 581 8.9E-14 T 01-11-2018 D3790_01640 8fc21ce203c53d7da74ec673f9f1f954 997 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 388 402 8.9E-14 T 01-11-2018 D3790_01640 8fc21ce203c53d7da74ec673f9f1f954 997 Gene3D G3DSA:3.40.50.150 357 725 6.8E-50 T 01-11-2018 D3790_13240 f48667103e58bd884e13d0868d2c2b5a 127 SUPERFAMILY SSF47413 13 78 4.5E-11 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_13240 f48667103e58bd884e13d0868d2c2b5a 127 Pfam PF01381 Helix-turn-helix 27 77 2.8E-8 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_13240 f48667103e58bd884e13d0868d2c2b5a 127 SMART SM00530 22 77 0.0016 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_13240 f48667103e58bd884e13d0868d2c2b5a 127 Gene3D G3DSA:1.10.260.40 16 87 1.0E-10 T 01-11-2018 D3790_11645 c68a6ecf0c8262569972623906fc495d 217 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 43 50 - T 01-11-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 D3790_11645 c68a6ecf0c8262569972623906fc495d 217 Pfam PF00484 Carbonic anhydrase 39 189 4.8E-51 T 01-11-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 D3790_11645 c68a6ecf0c8262569972623906fc495d 217 SMART SM00947 31 193 3.1E-69 T 01-11-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 D3790_11645 c68a6ecf0c8262569972623906fc495d 217 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 83 103 - T 01-11-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 D3790_11645 c68a6ecf0c8262569972623906fc495d 217 SUPERFAMILY SSF53056 2 211 1.44E-76 T 01-11-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 D3790_11645 c68a6ecf0c8262569972623906fc495d 217 Gene3D G3DSA:3.40.1050.10 1 217 3.9E-91 T 01-11-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 D3790_09840 c45c51a681e0a441c528d2b438af6818 249 SUPERFAMILY SSF53448 1 245 1.08E-64 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_09840 c45c51a681e0a441c528d2b438af6818 249 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 2 240 5.4E-121 T 01-11-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 D3790_09840 c45c51a681e0a441c528d2b438af6818 249 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 247 44.471 T 01-11-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 D3790_09840 c45c51a681e0a441c528d2b438af6818 249 Gene3D G3DSA:3.90.550.10 1 248 5.6E-94 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_09840 c45c51a681e0a441c528d2b438af6818 249 Pfam PF02348 Cytidylyltransferase 4 220 1.1E-68 T 01-11-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 D3790_06965 5896dfa8f77a082252abbc001791a13e 668 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 62 668 4.5E-239 T 01-11-2018 IPR010100 TonB-dependent copper receptor D3790_06965 5896dfa8f77a082252abbc001791a13e 668 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 159 9.4E-10 T 01-11-2018 IPR012910 TonB-dependent receptor, plug domain D3790_06965 5896dfa8f77a082252abbc001791a13e 668 SUPERFAMILY SSF56935 47 668 4.76E-83 T 01-11-2018 D3790_06965 5896dfa8f77a082252abbc001791a13e 668 Gene3D G3DSA:2.170.130.10 55 166 1.7E-9 T 01-11-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D3790_06965 5896dfa8f77a082252abbc001791a13e 668 Pfam PF00593 TonB dependent receptor 215 667 1.8E-39 T 01-11-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D3790_06965 5896dfa8f77a082252abbc001791a13e 668 Gene3D G3DSA:2.40.170.20 173 668 6.4E-59 T 01-11-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3790_14925 6651e80c194132eefcd075f27dcd922a 171 SUPERFAMILY SSF56235 2 159 2.57E-20 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D3790_14925 6651e80c194132eefcd075f27dcd922a 171 Pfam PF13522 Glutamine amidotransferase domain 63 156 8.6E-12 T 01-11-2018 D3790_14925 6651e80c194132eefcd075f27dcd922a 171 Gene3D G3DSA:3.60.20.10 2 169 1.4E-21 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D3790_07510 0b2d3936858d8c05066d732b5070ccf4 180 PIRSF PIRSF004690 1 180 1.4E-64 T 01-11-2018 IPR026269 Tat proofreading chaperone DmsD-type D3790_07510 0b2d3936858d8c05066d732b5070ccf4 180 Pfam PF02613 Nitrate reductase delta subunit 35 146 1.4E-7 T 01-11-2018 IPR020945 DMSO/Nitrate reductase chaperone D3790_07510 0b2d3936858d8c05066d732b5070ccf4 180 SUPERFAMILY SSF89155 2 178 3.53E-39 T 01-11-2018 IPR036411 TorD-like superfamily D3790_07510 0b2d3936858d8c05066d732b5070ccf4 180 Gene3D G3DSA:1.10.3480.10 1 180 2.8E-27 T 01-11-2018 D3790_06400 4247f8fa93d8615e4c39e4c537b5b30a 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 50.018 T 01-11-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D3790_06400 4247f8fa93d8615e4c39e4c537b5b30a 396 Gene3D G3DSA:3.40.50.1100 9 204 6.3E-183 T 01-11-2018 D3790_06400 4247f8fa93d8615e4c39e4c537b5b30a 396 SUPERFAMILY SSF53686 4 389 1.19E-142 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D3790_06400 4247f8fa93d8615e4c39e4c537b5b30a 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 01-11-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D3790_06400 4247f8fa93d8615e4c39e4c537b5b30a 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 372 2.8E-48 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D3790_06400 4247f8fa93d8615e4c39e4c537b5b30a 396 PIRSF PIRSF001413 1 396 4.8E-171 T 01-11-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D3790_06400 4247f8fa93d8615e4c39e4c537b5b30a 396 Gene3D G3DSA:3.40.50.1100 53 383 6.3E-183 T 01-11-2018 D3790_06400 4247f8fa93d8615e4c39e4c537b5b30a 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 388 6.5E-192 T 01-11-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D3790_08520 33faab541c531328dd775070fffcf153 456 Pfam PF04715 Anthranilate synthase component I, N terminal region 21 153 1.3E-27 T 01-11-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D3790_08520 33faab541c531328dd775070fffcf153 456 SUPERFAMILY SSF56322 3 450 3.53E-146 T 01-11-2018 IPR005801 ADC synthase GO:0009058 D3790_08520 33faab541c531328dd775070fffcf153 456 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 106 443 1.6E-124 T 01-11-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 D3790_08520 33faab541c531328dd775070fffcf153 456 PRINTS PR00095 Anthranilate synthase component I signature 384 398 7.1E-17 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D3790_08520 33faab541c531328dd775070fffcf153 456 PRINTS PR00095 Anthranilate synthase component I signature 290 303 7.1E-17 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D3790_08520 33faab541c531328dd775070fffcf153 456 PRINTS PR00095 Anthranilate synthase component I signature 304 317 7.1E-17 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D3790_08520 33faab541c531328dd775070fffcf153 456 PRINTS PR00095 Anthranilate synthase component I signature 399 413 7.1E-17 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D3790_08520 33faab541c531328dd775070fffcf153 456 Gene3D G3DSA:3.60.120.10 2 451 1.7E-176 T 01-11-2018 IPR005801 ADC synthase GO:0009058 D3790_08520 33faab541c531328dd775070fffcf153 456 Pfam PF00425 chorismate binding enzyme 189 442 8.2E-93 T 01-11-2018 IPR015890 Chorismate-utilising enzyme, C-terminal D3790_17235 b59fdf8e14c2d73546d4984030d19e38 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 8.3E-116 T 01-11-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 D3790_17235 b59fdf8e14c2d73546d4984030d19e38 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 2.3E-74 T 01-11-2018 IPR005495 Permease LptG/LptF-related GO:0016021 D3790_10255 86c8a84a0ac7202cd1ce26e42798dd0d 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 1.4E-13 T 01-11-2018 IPR002177 DNA-binding protein Dps D3790_10255 86c8a84a0ac7202cd1ce26e42798dd0d 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 1.4E-13 T 01-11-2018 IPR002177 DNA-binding protein Dps D3790_10255 86c8a84a0ac7202cd1ce26e42798dd0d 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 1.4E-13 T 01-11-2018 IPR002177 DNA-binding protein Dps D3790_10255 86c8a84a0ac7202cd1ce26e42798dd0d 167 Gene3D G3DSA:1.20.1260.10 1 167 6.5E-52 T 01-11-2018 IPR012347 Ferritin-like D3790_10255 86c8a84a0ac7202cd1ce26e42798dd0d 167 SUPERFAMILY SSF47240 12 167 3.28E-47 T 01-11-2018 IPR009078 Ferritin-like superfamily D3790_10255 86c8a84a0ac7202cd1ce26e42798dd0d 167 Pfam PF00210 Ferritin-like domain 30 166 2.9E-23 T 01-11-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 D3790_10255 86c8a84a0ac7202cd1ce26e42798dd0d 167 PIRSF PIRSF005900 11 167 6.4E-43 T 01-11-2018 IPR002177 DNA-binding protein Dps D3790_18455 d7d2f5c634631052643b29899a7b48b5 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 7 148 37.686 T 01-11-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D3790_18455 d7d2f5c634631052643b29899a7b48b5 150 Gene3D G3DSA:3.10.129.10 4 147 3.0E-67 T 01-11-2018 D3790_18455 d7d2f5c634631052643b29899a7b48b5 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 7 145 9.3E-61 T 01-11-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D3790_18455 d7d2f5c634631052643b29899a7b48b5 150 SUPERFAMILY SSF54637 6 146 3.23E-51 T 01-11-2018 IPR029069 HotDog domain superfamily D3790_18455 d7d2f5c634631052643b29899a7b48b5 150 Pfam PF07977 FabA-like domain 16 141 1.0E-39 T 01-11-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D3790_19445 aa336dbb4c8b755f7a03fecede567d6e 301 ProSitePatterns PS01125 ROK family signature. 130 157 - T 01-11-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 D3790_19445 aa336dbb4c8b755f7a03fecede567d6e 301 Gene3D G3DSA:3.30.420.40 4 296 1.1E-79 T 01-11-2018 D3790_19445 aa336dbb4c8b755f7a03fecede567d6e 301 Pfam PF00480 ROK family 3 301 5.1E-83 T 01-11-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 D3790_19445 aa336dbb4c8b755f7a03fecede567d6e 301 SUPERFAMILY SSF53067 2 299 2.33E-61 T 01-11-2018 D3790_19445 aa336dbb4c8b755f7a03fecede567d6e 301 Gene3D G3DSA:3.30.420.40 119 289 1.1E-79 T 01-11-2018 D3790_06535 3bd9cfae784f493156e839a713060e5d 647 Gene3D G3DSA:2.40.50.640 83 157 5.1E-29 T 01-11-2018 D3790_06535 3bd9cfae784f493156e839a713060e5d 647 SMART SM00955 192 520 1.5E-122 T 01-11-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 D3790_06535 3bd9cfae784f493156e839a713060e5d 647 Pfam PF00575 S1 RNA binding domain 564 642 4.7E-8 T 01-11-2018 IPR003029 S1 domain GO:0003676 D3790_06535 3bd9cfae784f493156e839a713060e5d 647 Gene3D G3DSA:2.40.50.140 1 82 2.5E-28 T 01-11-2018 D3790_06535 3bd9cfae784f493156e839a713060e5d 647 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 646 45.128 T 01-11-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 D3790_06535 3bd9cfae784f493156e839a713060e5d 647 Pfam PF00773 RNB domain 192 519 2.4E-87 T 01-11-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 D3790_06535 3bd9cfae784f493156e839a713060e5d 647 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 646 3.6E-218 T 01-11-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 D3790_06535 3bd9cfae784f493156e839a713060e5d 647 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 645 0.0 T 01-11-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 D3790_06535 3bd9cfae784f493156e839a713060e5d 647 SUPERFAMILY SSF50249 563 645 3.73E-19 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_06535 3bd9cfae784f493156e839a713060e5d 647 Gene3D G3DSA:2.40.50.140 561 647 1.6E-33 T 01-11-2018 D3790_06535 3bd9cfae784f493156e839a713060e5d 647 SUPERFAMILY SSF50249 8 80 1.58E-14 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_06535 3bd9cfae784f493156e839a713060e5d 647 SUPERFAMILY SSF50249 191 559 1.41E-115 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_06535 3bd9cfae784f493156e839a713060e5d 647 Pfam PF08206 Ribonuclease B OB domain 24 80 4.6E-17 T 01-11-2018 IPR013223 Ribonuclease B, N-terminal OB domain D3790_06535 3bd9cfae784f493156e839a713060e5d 647 SMART SM00357 23 79 1.1E-10 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 D3790_06535 3bd9cfae784f493156e839a713060e5d 647 SUPERFAMILY SSF50249 83 173 9.14E-32 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_06535 3bd9cfae784f493156e839a713060e5d 647 ProSitePatterns PS01175 Ribonuclease II family signature. 487 511 - T 01-11-2018 IPR022966 Ribonuclease II/R, conserved site D3790_12920 5a770cb3084591a36fbd54d516e6274f 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 44.975 T 01-11-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D3790_12920 5a770cb3084591a36fbd54d516e6274f 529 SMART SM00798 137 461 5.0E-214 T 01-11-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D3790_12920 5a770cb3084591a36fbd54d516e6274f 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 3.0E-120 T 01-11-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D3790_12920 5a770cb3084591a36fbd54d516e6274f 529 SUPERFAMILY SSF52335 7 197 7.06E-72 T 01-11-2018 IPR036914 Methylglyoxal synthase-like domain superfamily D3790_12920 5a770cb3084591a36fbd54d516e6274f 529 Gene3D G3DSA:3.40.140.20 392 529 8.1E-60 T 01-11-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D3790_12920 5a770cb3084591a36fbd54d516e6274f 529 SMART SM00851 19 132 1.5E-60 T 01-11-2018 IPR011607 Methylglyoxal synthase-like domain D3790_12920 5a770cb3084591a36fbd54d516e6274f 529 Gene3D G3DSA:3.40.50.1380 4 197 1.5E-86 T 01-11-2018 IPR036914 Methylglyoxal synthase-like domain superfamily D3790_12920 5a770cb3084591a36fbd54d516e6274f 529 SUPERFAMILY SSF53927 221 529 3.21E-129 T 01-11-2018 IPR016193 Cytidine deaminase-like GO:0003824 D3790_12920 5a770cb3084591a36fbd54d516e6274f 529 Pfam PF02142 MGS-like domain 19 132 1.1E-29 T 01-11-2018 IPR011607 Methylglyoxal synthase-like domain D3790_12920 5a770cb3084591a36fbd54d516e6274f 529 PIRSF PIRSF000414 1 529 1.3E-227 T 01-11-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D3790_12920 5a770cb3084591a36fbd54d516e6274f 529 Gene3D G3DSA:3.40.140.20 218 372 3.7E-57 T 01-11-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D3790_12920 5a770cb3084591a36fbd54d516e6274f 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 1.1E-256 T 01-11-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D3790_12300 e4d7e64eb1820705bab787cd1b9691d1 236 Gene3D G3DSA:2.60.120.620 2 236 6.7E-30 T 01-11-2018 D3790_12300 e4d7e64eb1820705bab787cd1b9691d1 236 Pfam PF10014 2OG-Fe dioxygenase 41 232 2.6E-39 T 01-11-2018 IPR018724 2OG-Fe dioxygenase D3790_18785 70bf2374816c8971ec58f643cdc30205 469 Pfam PF00772 DnaB-like helicase N terminal domain 25 126 4.9E-36 T 01-11-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 D3790_18785 70bf2374816c8971ec58f643cdc30205 469 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 24 462 1.5E-174 T 01-11-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 D3790_18785 70bf2374816c8971ec58f643cdc30205 469 Gene3D G3DSA:3.40.50.300 182 461 6.8E-106 T 01-11-2018 D3790_18785 70bf2374816c8971ec58f643cdc30205 469 Pfam PF03796 DnaB-like helicase C terminal domain 204 460 6.7E-111 T 01-11-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 D3790_18785 70bf2374816c8971ec58f643cdc30205 469 Gene3D G3DSA:1.10.860.10 18 181 5.6E-54 T 01-11-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal D3790_18785 70bf2374816c8971ec58f643cdc30205 469 SUPERFAMILY SSF48024 23 134 3.14E-37 T 01-11-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 D3790_18785 70bf2374816c8971ec58f643cdc30205 469 SMART SM00382 221 427 4.1E-4 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_18785 70bf2374816c8971ec58f643cdc30205 469 SUPERFAMILY SSF52540 202 454 1.44E-53 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_19420 371f0831ebc085d1f1d8d46c5b644d1f 308 SUPERFAMILY SSF46785 2 86 1.13E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_19420 371f0831ebc085d1f1d8d46c5b644d1f 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.0E-16 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_19420 371f0831ebc085d1f1d8d46c5b644d1f 308 Gene3D G3DSA:3.40.190.10 171 267 2.9E-7 T 01-11-2018 D3790_19420 371f0831ebc085d1f1d8d46c5b644d1f 308 Gene3D G3DSA:3.40.190.10 99 283 2.9E-7 T 01-11-2018 D3790_19420 371f0831ebc085d1f1d8d46c5b644d1f 308 SUPERFAMILY SSF53850 92 289 2.02E-27 T 01-11-2018 D3790_19420 371f0831ebc085d1f1d8d46c5b644d1f 308 Pfam PF03466 LysR substrate binding domain 98 286 3.8E-12 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_19420 371f0831ebc085d1f1d8d46c5b644d1f 308 Gene3D G3DSA:1.10.10.10 5 95 2.7E-18 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_02335 4c53e60b98d443de7a6b5acc9ed40992 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 4.3E-36 T 01-11-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 D3790_02335 4c53e60b98d443de7a6b5acc9ed40992 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 4.3E-36 T 01-11-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 D3790_02335 4c53e60b98d443de7a6b5acc9ed40992 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 4.3E-36 T 01-11-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 D3790_02335 4c53e60b98d443de7a6b5acc9ed40992 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 4.3E-36 T 01-11-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 D3790_02335 4c53e60b98d443de7a6b5acc9ed40992 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 01-11-2018 IPR020583 Inositol monophosphatase, metal-binding site D3790_02335 4c53e60b98d443de7a6b5acc9ed40992 267 Gene3D G3DSA:3.30.540.10 1 140 2.4E-53 T 01-11-2018 D3790_02335 4c53e60b98d443de7a6b5acc9ed40992 267 Gene3D G3DSA:3.40.190.80 142 267 1.3E-37 T 01-11-2018 D3790_02335 4c53e60b98d443de7a6b5acc9ed40992 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 3.6E-57 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D3790_02335 4c53e60b98d443de7a6b5acc9ed40992 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 3.6E-57 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D3790_02335 4c53e60b98d443de7a6b5acc9ed40992 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 3.6E-57 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D3790_02335 4c53e60b98d443de7a6b5acc9ed40992 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 3.6E-57 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D3790_02335 4c53e60b98d443de7a6b5acc9ed40992 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 3.6E-57 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D3790_02335 4c53e60b98d443de7a6b5acc9ed40992 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 3.6E-57 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D3790_02335 4c53e60b98d443de7a6b5acc9ed40992 267 SUPERFAMILY SSF56655 1 259 7.2E-83 T 01-11-2018 D3790_02335 4c53e60b98d443de7a6b5acc9ed40992 267 Pfam PF00459 Inositol monophosphatase family 2 260 1.5E-69 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D3790_13590 96c9a9c2851057534637fa69597ee230 411 Gene3D G3DSA:3.30.479.30 117 251 1.3E-17 T 01-11-2018 D3790_13590 96c9a9c2851057534637fa69597ee230 411 SUPERFAMILY SSF117892 122 255 9.55E-21 T 01-11-2018 IPR036013 Band 7/SPFH domain superfamily D3790_13590 96c9a9c2851057534637fa69597ee230 411 TIGRFAM TIGR01933 hflK: HflK protein 91 349 5.3E-116 T 01-11-2018 IPR010201 HflK GO:0016021 D3790_13590 96c9a9c2851057534637fa69597ee230 411 SMART SM00244 89 249 2.7E-41 T 01-11-2018 IPR001107 Band 7 domain D3790_13590 96c9a9c2851057534637fa69597ee230 411 Pfam PF01145 SPFH domain / Band 7 family 93 264 9.0E-32 T 01-11-2018 IPR001107 Band 7 domain D3790_13590 96c9a9c2851057534637fa69597ee230 411 Pfam PF12221 Bacterial membrane protein N terminal 1 58 1.0E-11 T 01-11-2018 IPR020980 Menbrane protein HflK, N-terminal D3790_13590 96c9a9c2851057534637fa69597ee230 411 PRINTS PR00721 Stomatin signature 143 164 2.8E-6 T 01-11-2018 IPR001972 Stomatin family GO:0016020 D3790_13590 96c9a9c2851057534637fa69597ee230 411 PRINTS PR00721 Stomatin signature 96 118 2.8E-6 T 01-11-2018 IPR001972 Stomatin family GO:0016020 D3790_13590 96c9a9c2851057534637fa69597ee230 411 PRINTS PR00721 Stomatin signature 178 195 2.8E-6 T 01-11-2018 IPR001972 Stomatin family GO:0016020 D3790_07270 99abc768f73d8e867fa430ed1f0eccac 386 Gene3D G3DSA:3.30.420.10 11 204 1.0E-66 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_07270 99abc768f73d8e867fa430ed1f0eccac 386 Pfam PF01612 3'-5' exonuclease 13 180 5.0E-40 T 01-11-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 D3790_07270 99abc768f73d8e867fa430ed1f0eccac 386 Pfam PF00570 HRDC domain 223 289 1.6E-16 T 01-11-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 D3790_07270 99abc768f73d8e867fa430ed1f0eccac 386 SUPERFAMILY SSF47819 206 311 7.66E-29 T 01-11-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 D3790_07270 99abc768f73d8e867fa430ed1f0eccac 386 Gene3D G3DSA:1.10.150.80 205 302 2.6E-22 T 01-11-2018 D3790_07270 99abc768f73d8e867fa430ed1f0eccac 386 SUPERFAMILY SSF53098 9 220 7.11E-66 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_07270 99abc768f73d8e867fa430ed1f0eccac 386 SUPERFAMILY SSF47819 306 382 2.22E-20 T 01-11-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 D3790_07270 99abc768f73d8e867fa430ed1f0eccac 386 TIGRFAM TIGR01388 rnd: ribonuclease D 15 374 1.9E-140 T 01-11-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 D3790_07270 99abc768f73d8e867fa430ed1f0eccac 386 SMART SM00474 13 181 4.4E-45 T 01-11-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 D3790_07270 99abc768f73d8e867fa430ed1f0eccac 386 SMART SM00341 220 299 4.0E-17 T 01-11-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 D3790_07270 99abc768f73d8e867fa430ed1f0eccac 386 Hamap MF_01899 Ribonuclease D [rnd]. 13 381 44.326 T 01-11-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 D3790_07270 99abc768f73d8e867fa430ed1f0eccac 386 Gene3D G3DSA:1.10.150.80 304 385 4.3E-27 T 01-11-2018 D3790_08930 6de0eca5987d190c82ebed68834f8c7f 170 Pfam PF07566 Domain of Unknown Function (DUF1543) 90 135 1.5E-14 T 01-11-2018 IPR011440 Domain of unknown function DUF1543 D3790_08930 6de0eca5987d190c82ebed68834f8c7f 170 Pfam PF07566 Domain of Unknown Function (DUF1543) 16 66 4.0E-17 T 01-11-2018 IPR011440 Domain of unknown function DUF1543 D3790_08930 6de0eca5987d190c82ebed68834f8c7f 170 Gene3D G3DSA:3.10.20.10 4 165 4.3E-60 T 01-11-2018 D3790_08930 6de0eca5987d190c82ebed68834f8c7f 170 Gene3D G3DSA:3.50.100.10 57 157 4.3E-60 T 01-11-2018 D3790_09330 11eccb3b078c017a113706440ab10148 153 Pfam PF04347 Flagellar biosynthesis protein, FliO 57 140 1.7E-21 T 01-11-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 D3790_09330 11eccb3b078c017a113706440ab10148 153 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 45 114 3.6E-23 T 01-11-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 D3790_01090 fab0a1c6be2d26f734c359b9b13b2bfb 243 PIRSF PIRSF015601 2 242 4.2E-54 T 01-11-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 D3790_01090 fab0a1c6be2d26f734c359b9b13b2bfb 243 SUPERFAMILY SSF88697 2 68 3.73E-17 T 01-11-2018 IPR015947 PUA-like superfamily D3790_01090 fab0a1c6be2d26f734c359b9b13b2bfb 243 SUPERFAMILY SSF75217 75 242 5.98E-52 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases D3790_01090 fab0a1c6be2d26f734c359b9b13b2bfb 243 Pfam PF04452 RNA methyltransferase 19 236 1.3E-73 T 01-11-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 D3790_01090 fab0a1c6be2d26f734c359b9b13b2bfb 243 Gene3D G3DSA:3.40.1280.10 74 243 5.0E-66 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D3790_01090 fab0a1c6be2d26f734c359b9b13b2bfb 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 242 1.3E-88 T 01-11-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 D3790_01090 fab0a1c6be2d26f734c359b9b13b2bfb 243 Gene3D G3DSA:2.40.240.20 1 72 1.0E-21 T 01-11-2018 D3790_02765 725b03fe249765883bbd21aac67c529a 359 SUPERFAMILY SSF56801 3 358 2.88E-86 T 01-11-2018 D3790_02765 725b03fe249765883bbd21aac67c529a 359 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 57 2.5E-23 T 01-11-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 D3790_02765 725b03fe249765883bbd21aac67c529a 359 Gene3D G3DSA:3.40.50.12780 30 359 3.6E-63 T 01-11-2018 D3790_02765 725b03fe249765883bbd21aac67c529a 359 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_02765 725b03fe249765883bbd21aac67c529a 359 Pfam PF00501 AMP-binding enzyme 59 357 1.1E-50 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_02980 334f7ee7f572299f046a2f786dadaa20 263 Pfam PF01578 Cytochrome C assembly protein 39 261 8.0E-38 T 01-11-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 D3790_05685 af09c2ccd1f5362b23c7b6582fa259a2 468 ProSitePatterns PS00218 Amino acid permeases signature. 51 81 - T 01-11-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 D3790_05685 af09c2ccd1f5362b23c7b6582fa259a2 468 Gene3D G3DSA:1.20.1740.10 17 467 9.9E-59 T 01-11-2018 D3790_05685 af09c2ccd1f5362b23c7b6582fa259a2 468 Pfam PF00324 Amino acid permease 26 465 4.9E-113 T 01-11-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 D3790_05685 af09c2ccd1f5362b23c7b6582fa259a2 468 PIRSF PIRSF006060 2 467 8.0E-73 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D3790_00120 e7ebd04959e375599ff175762c79de39 166 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 88 106 1.3E-12 T 01-11-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D3790_00120 e7ebd04959e375599ff175762c79de39 166 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 29 42 1.3E-12 T 01-11-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D3790_00120 e7ebd04959e375599ff175762c79de39 166 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 43 55 1.3E-12 T 01-11-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D3790_00120 e7ebd04959e375599ff175762c79de39 166 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 72 86 1.3E-12 T 01-11-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D3790_00120 e7ebd04959e375599ff175762c79de39 166 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 34 115 5.4E-11 T 01-11-2018 IPR000477 Reverse transcriptase domain D3790_13375 e61998925c3dd82beebd61506b45283d 112 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 7.7E-26 T 01-11-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 D3790_13375 e61998925c3dd82beebd61506b45283d 112 Pfam PF03840 Preprotein translocase SecG subunit 5 72 1.6E-21 T 01-11-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 D3790_13375 e61998925c3dd82beebd61506b45283d 112 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 3.8E-39 T 01-11-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 D3790_13375 e61998925c3dd82beebd61506b45283d 112 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 3.8E-39 T 01-11-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 D3790_13375 e61998925c3dd82beebd61506b45283d 112 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 3.8E-39 T 01-11-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 D3790_13375 e61998925c3dd82beebd61506b45283d 112 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 3.8E-39 T 01-11-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 D3790_08095 635bad858dc37b589eceb97f7095ebe7 292 Pfam PF08543 Phosphomethylpyrimidine kinase 74 256 1.1E-15 T 01-11-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 D3790_08095 635bad858dc37b589eceb97f7095ebe7 292 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 289 9.8E-124 T 01-11-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 D3790_08095 635bad858dc37b589eceb97f7095ebe7 292 SUPERFAMILY SSF53613 1 283 3.9E-73 T 01-11-2018 IPR029056 Ribokinase-like D3790_08095 635bad858dc37b589eceb97f7095ebe7 292 Gene3D G3DSA:3.40.1190.20 1 292 1.4E-90 T 01-11-2018 IPR029056 Ribokinase-like D3790_08095 635bad858dc37b589eceb97f7095ebe7 292 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 291 51.398 T 01-11-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 D3790_00830 887a0324271e7475276dd101866a777c 565 Pfam PF08479 POTRA domain, ShlB-type 83 157 4.5E-22 T 01-11-2018 IPR013686 Polypeptide-transport-associated, ShlB-type D3790_00830 887a0324271e7475276dd101866a777c 565 Pfam PF17287 POTRA domain 158 210 2.1E-20 T 01-11-2018 IPR035251 ShlB, POTRA domain D3790_00830 887a0324271e7475276dd101866a777c 565 PIRSF PIRSF029745 3 565 1.6E-137 T 01-11-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 D3790_00830 887a0324271e7475276dd101866a777c 565 Gene3D G3DSA:3.10.20.310 71 157 3.3E-12 T 01-11-2018 D3790_00830 887a0324271e7475276dd101866a777c 565 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 215 528 2.7E-91 T 01-11-2018 IPR005565 Haemolysin activator HlyB, C-terminal D3790_00830 887a0324271e7475276dd101866a777c 565 Gene3D G3DSA:2.40.160.50 187 565 1.5E-84 T 01-11-2018 D3790_13565 a9f4ab5b38681530641cd2bbe8ad804b 245 Gene3D G3DSA:3.30.1330.30 1 76 5.8E-30 T 01-11-2018 IPR029064 50S ribosomal protein L30e-like D3790_13565 a9f4ab5b38681530641cd2bbe8ad804b 245 SUPERFAMILY SSF55315 2 76 8.0E-22 T 01-11-2018 IPR029064 50S ribosomal protein L30e-like D3790_13565 a9f4ab5b38681530641cd2bbe8ad804b 245 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 4 77 8.6E-22 T 01-11-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 D3790_13565 a9f4ab5b38681530641cd2bbe8ad804b 245 SUPERFAMILY SSF75217 70 243 5.3E-50 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases D3790_13565 a9f4ab5b38681530641cd2bbe8ad804b 245 Gene3D G3DSA:3.40.1280.10 77 243 2.6E-67 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D3790_13565 a9f4ab5b38681530641cd2bbe8ad804b 245 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 6.9E-93 T 01-11-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 D3790_13565 a9f4ab5b38681530641cd2bbe8ad804b 245 Pfam PF00588 SpoU rRNA Methylase family 96 236 4.9E-41 T 01-11-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 D3790_13565 a9f4ab5b38681530641cd2bbe8ad804b 245 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.6 T 01-11-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB D3790_13565 a9f4ab5b38681530641cd2bbe8ad804b 245 SMART SM00967 4 80 3.6E-22 T 01-11-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 D3790_10465 53d8e875ee70fcfadf1b12c4afb898af 182 PIRSF PIRSF006135 1 182 6.8E-55 T 01-11-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 D3790_10465 53d8e875ee70fcfadf1b12c4afb898af 182 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 181 6.6E-59 T 01-11-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 D3790_10465 53d8e875ee70fcfadf1b12c4afb898af 182 Gene3D G3DSA:3.40.50.300 2 182 1.6E-62 T 01-11-2018 D3790_10465 53d8e875ee70fcfadf1b12c4afb898af 182 SUPERFAMILY SSF52540 2 182 1.17E-50 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_00545 33ba08bd62e55bdb621560800a499ad4 290 Pfam PF13592 Winged helix-turn helix 103 161 6.6E-18 T 01-11-2018 IPR025959 Winged helix-turn helix domain D3790_00545 33ba08bd62e55bdb621560800a499ad4 290 Pfam PF13384 Homeodomain-like domain 20 64 5.5E-11 T 01-11-2018 D3790_00545 33ba08bd62e55bdb621560800a499ad4 290 Pfam PF13358 DDE superfamily endonuclease 176 284 4.6E-23 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_00545 33ba08bd62e55bdb621560800a499ad4 290 Gene3D G3DSA:3.30.420.470 139 284 4.5E-6 T 01-11-2018 D3790_00545 33ba08bd62e55bdb621560800a499ad4 290 SUPERFAMILY SSF46689 16 136 6.09E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_06570 33ba08bd62e55bdb621560800a499ad4 290 Pfam PF13592 Winged helix-turn helix 103 161 6.6E-18 T 01-11-2018 IPR025959 Winged helix-turn helix domain D3790_06570 33ba08bd62e55bdb621560800a499ad4 290 Pfam PF13384 Homeodomain-like domain 20 64 5.5E-11 T 01-11-2018 D3790_06570 33ba08bd62e55bdb621560800a499ad4 290 Pfam PF13358 DDE superfamily endonuclease 176 284 4.6E-23 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_06570 33ba08bd62e55bdb621560800a499ad4 290 Gene3D G3DSA:3.30.420.470 139 284 4.5E-6 T 01-11-2018 D3790_06570 33ba08bd62e55bdb621560800a499ad4 290 SUPERFAMILY SSF46689 16 136 6.09E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_19440 977f639b16036d97f9b1f36b4125306a 653 SUPERFAMILY SSF55816 360 601 2.62E-36 T 01-11-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_19440 977f639b16036d97f9b1f36b4125306a 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 360 554 1.9E-19 T 01-11-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_19440 977f639b16036d97f9b1f36b4125306a 653 SUPERFAMILY SSF56300 23 357 4.27E-83 T 01-11-2018 D3790_19440 977f639b16036d97f9b1f36b4125306a 653 Gene3D G3DSA:3.60.21.10 20 358 2.2E-135 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like D3790_19440 977f639b16036d97f9b1f36b4125306a 653 Gene3D G3DSA:3.90.780.10 417 593 5.0E-49 T 01-11-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_19440 977f639b16036d97f9b1f36b4125306a 653 PRINTS PR01607 Apyrase family signature 26 44 3.5E-31 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_19440 977f639b16036d97f9b1f36b4125306a 653 PRINTS PR01607 Apyrase family signature 287 307 3.5E-31 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_19440 977f639b16036d97f9b1f36b4125306a 653 PRINTS PR01607 Apyrase family signature 432 455 3.5E-31 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_19440 977f639b16036d97f9b1f36b4125306a 653 PRINTS PR01607 Apyrase family signature 534 553 3.5E-31 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_19440 977f639b16036d97f9b1f36b4125306a 653 PRINTS PR01607 Apyrase family signature 219 236 3.5E-31 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_19440 977f639b16036d97f9b1f36b4125306a 653 PRINTS PR01607 Apyrase family signature 247 270 3.5E-31 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_19440 977f639b16036d97f9b1f36b4125306a 653 ProSitePatterns PS00785 5'-nucleotidase signature 1. 28 40 - T 01-11-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_19440 977f639b16036d97f9b1f36b4125306a 653 Pfam PF00149 Calcineurin-like phosphoesterase 28 263 5.4E-10 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 D3790_19440 977f639b16036d97f9b1f36b4125306a 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 26 651 0.0 T 01-11-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 D3790_08570 990de539d6ade046931a776f2d68a239 507 Pfam PF05231 MASE1 13 276 9.5E-16 T 01-11-2018 IPR007895 MASE1 D3790_08570 990de539d6ade046931a776f2d68a239 507 Gene3D G3DSA:3.30.565.10 366 506 4.5E-24 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_08570 990de539d6ade046931a776f2d68a239 507 Pfam PF07730 Histidine kinase 304 367 4.9E-9 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 D3790_08570 990de539d6ade046931a776f2d68a239 507 SMART SM00387 411 507 4.3E-5 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_08570 990de539d6ade046931a776f2d68a239 507 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 414 485 3.2E-7 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_08570 990de539d6ade046931a776f2d68a239 507 SUPERFAMILY SSF55874 404 505 1.31E-12 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_15755 5dbd2d5c67b04467f7a2870457ae7c6b 109 Pfam PF10625 Universal stress protein B (UspB) 1 106 3.5E-53 T 01-11-2018 IPR019598 Universal stress protein B D3790_05990 5a09504747f2337b047c2707874aca24 344 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 27 328 5.3E-92 T 01-11-2018 IPR010732 Type VI secretion, TssG-like D3790_05990 5a09504747f2337b047c2707874aca24 344 Pfam PF06996 Type VI secretion, TssG 26 328 4.9E-100 T 01-11-2018 IPR010732 Type VI secretion, TssG-like D3790_03915 0165f0dca72ecc332ff711a83dd9fe65 386 Pfam PF12698 ABC-2 family transporter protein 39 378 2.6E-39 T 01-11-2018 D3790_10085 f63492ced8f46f1cf3c853ddf02e10bf 441 Gene3D G3DSA:3.40.50.1980 36 234 8.2E-126 T 01-11-2018 D3790_10085 f63492ced8f46f1cf3c853ddf02e10bf 441 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 38 428 2.2E-163 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D3790_10085 f63492ced8f46f1cf3c853ddf02e10bf 441 PIRSF PIRSF000099 2 432 1.0E-168 T 01-11-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D3790_10085 f63492ced8f46f1cf3c853ddf02e10bf 441 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 9 429 41.064 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D3790_10085 f63492ced8f46f1cf3c853ddf02e10bf 441 Pfam PF00815 Histidinol dehydrogenase 29 429 4.7E-169 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D3790_10085 f63492ced8f46f1cf3c853ddf02e10bf 441 PRINTS PR00083 Histidinol dehydrogenase signature 38 62 3.7E-99 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D3790_10085 f63492ced8f46f1cf3c853ddf02e10bf 441 PRINTS PR00083 Histidinol dehydrogenase signature 232 253 3.7E-99 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D3790_10085 f63492ced8f46f1cf3c853ddf02e10bf 441 PRINTS PR00083 Histidinol dehydrogenase signature 363 381 3.7E-99 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D3790_10085 f63492ced8f46f1cf3c853ddf02e10bf 441 PRINTS PR00083 Histidinol dehydrogenase signature 200 225 3.7E-99 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D3790_10085 f63492ced8f46f1cf3c853ddf02e10bf 441 PRINTS PR00083 Histidinol dehydrogenase signature 139 165 3.7E-99 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D3790_10085 f63492ced8f46f1cf3c853ddf02e10bf 441 PRINTS PR00083 Histidinol dehydrogenase signature 322 347 3.7E-99 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D3790_10085 f63492ced8f46f1cf3c853ddf02e10bf 441 PRINTS PR00083 Histidinol dehydrogenase signature 254 273 3.7E-99 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D3790_10085 f63492ced8f46f1cf3c853ddf02e10bf 441 PRINTS PR00083 Histidinol dehydrogenase signature 170 196 3.7E-99 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D3790_10085 f63492ced8f46f1cf3c853ddf02e10bf 441 SUPERFAMILY SSF53720 9 434 1.79E-88 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D3790_10085 f63492ced8f46f1cf3c853ddf02e10bf 441 Gene3D G3DSA:3.40.50.1980 236 351 8.2E-126 T 01-11-2018 D3790_13070 d83f1242a102ef4ccb77abce96e94ae6 99 Gene3D G3DSA:1.10.260.40 8 89 1.1E-10 T 01-11-2018 D3790_13070 d83f1242a102ef4ccb77abce96e94ae6 99 SMART SM00530 31 86 2.4E-7 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_13070 d83f1242a102ef4ccb77abce96e94ae6 99 Pfam PF13744 Helix-turn-helix domain 9 87 5.7E-13 T 01-11-2018 IPR039554 HigA2-like, helix-turn-helix domain D3790_13070 d83f1242a102ef4ccb77abce96e94ae6 99 SUPERFAMILY SSF47413 19 92 4.02E-14 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_02265 3f007d417a3c742de83fc6c80fdf408c 86 Gene3D G3DSA:3.30.70.20 2 86 5.4E-35 T 01-11-2018 D3790_02265 3f007d417a3c742de83fc6c80fdf408c 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3790_02265 3f007d417a3c742de83fc6c80fdf408c 86 Pfam PF12838 4Fe-4S dicluster domain 8 55 8.9E-7 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3790_02265 3f007d417a3c742de83fc6c80fdf408c 86 SUPERFAMILY SSF54862 4 72 5.68E-17 T 01-11-2018 D3790_17570 b0eecd31d8161183debb6d55f43593b0 84 Gene3D G3DSA:3.30.300.90 1 84 6.8E-34 T 01-11-2018 D3790_17570 b0eecd31d8161183debb6d55f43593b0 84 SUPERFAMILY SSF82657 1 81 2.09E-27 T 01-11-2018 IPR036065 BolA-like superfamily D3790_17570 b0eecd31d8161183debb6d55f43593b0 84 PIRSF PIRSF003113 1 83 4.7E-22 T 01-11-2018 IPR002634 BolA protein D3790_17570 b0eecd31d8161183debb6d55f43593b0 84 Pfam PF01722 BolA-like protein 22 74 1.7E-13 T 01-11-2018 IPR002634 BolA protein D3790_13145 0e6af6542d5d6365c5acfb899f2e810b 337 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 329 3.0E-54 T 01-11-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 D3790_13145 0e6af6542d5d6365c5acfb899f2e810b 337 PRINTS PR00102 Ornithine carbamoyltransferase signature 310 321 3.1E-32 T 01-11-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 D3790_13145 0e6af6542d5d6365c5acfb899f2e810b 337 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 3.1E-32 T 01-11-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 D3790_13145 0e6af6542d5d6365c5acfb899f2e810b 337 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 3.1E-32 T 01-11-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 D3790_13145 0e6af6542d5d6365c5acfb899f2e810b 337 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 3.1E-32 T 01-11-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 D3790_13145 0e6af6542d5d6365c5acfb899f2e810b 337 PRINTS PR00102 Ornithine carbamoyltransferase signature 228 238 3.1E-32 T 01-11-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 D3790_13145 0e6af6542d5d6365c5acfb899f2e810b 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 1.6E-25 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D3790_13145 0e6af6542d5d6365c5acfb899f2e810b 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 296 319 1.6E-25 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D3790_13145 0e6af6542d5d6365c5acfb899f2e810b 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 1.6E-25 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D3790_13145 0e6af6542d5d6365c5acfb899f2e810b 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 1.6E-25 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D3790_13145 0e6af6542d5d6365c5acfb899f2e810b 337 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D3790_13145 0e6af6542d5d6365c5acfb899f2e810b 337 Gene3D G3DSA:3.40.50.1370 7 328 2.1E-134 T 01-11-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 D3790_13145 0e6af6542d5d6365c5acfb899f2e810b 337 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 332 78.664 T 01-11-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 D3790_13145 0e6af6542d5d6365c5acfb899f2e810b 337 SUPERFAMILY SSF53671 1 331 2.1E-94 T 01-11-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 D3790_13145 0e6af6542d5d6365c5acfb899f2e810b 337 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 331 3.3E-129 T 01-11-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 D3790_13145 0e6af6542d5d6365c5acfb899f2e810b 337 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 3.4E-44 T 01-11-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 D3790_13145 0e6af6542d5d6365c5acfb899f2e810b 337 Gene3D G3DSA:3.40.50.1370 150 318 2.1E-134 T 01-11-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 D3790_02295 850072f0668dd5f3ed487e261894002c 547 Pfam PF00512 His Kinase A (phospho-acceptor) domain 322 385 1.2E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_02295 850072f0668dd5f3ed487e261894002c 547 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 497 5.6E-8 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_02295 850072f0668dd5f3ed487e261894002c 547 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 483 5.6E-8 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_02295 850072f0668dd5f3ed487e261894002c 547 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 522 5.6E-8 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D3790_02295 850072f0668dd5f3ed487e261894002c 547 SUPERFAMILY SSF47384 304 385 6.67E-16 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D3790_02295 850072f0668dd5f3ed487e261894002c 547 SMART SM00388 321 389 8.4E-16 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D3790_02295 850072f0668dd5f3ed487e261894002c 547 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 435 543 2.4E-15 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_02295 850072f0668dd5f3ed487e261894002c 547 Gene3D G3DSA:1.10.287.130 264 385 1.6E-18 T 01-11-2018 D3790_02295 850072f0668dd5f3ed487e261894002c 547 Gene3D G3DSA:3.30.565.10 393 547 1.1E-29 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_02295 850072f0668dd5f3ed487e261894002c 547 SUPERFAMILY SSF55874 393 542 5.5E-31 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_02295 850072f0668dd5f3ed487e261894002c 547 SMART SM00387 432 544 7.0E-26 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase D3790_15450 40132776f0ab34b870ba0a919a000fd5 156 Gene3D G3DSA:1.20.5.620 62 122 3.5E-23 T 01-11-2018 D3790_15450 40132776f0ab34b870ba0a919a000fd5 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.681 T 01-11-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 D3790_15450 40132776f0ab34b870ba0a919a000fd5 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 8.5E-57 T 01-11-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 D3790_15450 40132776f0ab34b870ba0a919a000fd5 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 1.5E-36 T 01-11-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 D3790_15450 40132776f0ab34b870ba0a919a000fd5 156 SUPERFAMILY SSF81573 63 121 7.45E-15 T 01-11-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily D3790_05010 dacdbc072296902a0aa83350254dab83 287 SUPERFAMILY SSF46785 1 109 1.2E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_05010 dacdbc072296902a0aa83350254dab83 287 Gene3D G3DSA:3.40.190.10 89 283 1.3E-42 T 01-11-2018 D3790_05010 dacdbc072296902a0aa83350254dab83 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.1E-16 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_05010 dacdbc072296902a0aa83350254dab83 287 SUPERFAMILY SSF53850 89 286 3.69E-43 T 01-11-2018 D3790_05010 dacdbc072296902a0aa83350254dab83 287 Pfam PF03466 LysR substrate binding domain 89 286 3.0E-46 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_05010 dacdbc072296902a0aa83350254dab83 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 9.7E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_05010 dacdbc072296902a0aa83350254dab83 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 9.7E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_05010 dacdbc072296902a0aa83350254dab83 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 9.7E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_05010 dacdbc072296902a0aa83350254dab83 287 Gene3D G3DSA:3.40.190.10 162 262 1.3E-42 T 01-11-2018 D3790_05010 dacdbc072296902a0aa83350254dab83 287 Gene3D G3DSA:1.10.10.10 1 84 7.9E-21 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_05920 71e40ec6a04d7de19435e646105336aa 171 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 5.3E-46 T 01-11-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 D3790_05920 71e40ec6a04d7de19435e646105336aa 171 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.491 T 01-11-2018 IPR022920 Disulphide bond formation protein DsbB D3790_05920 71e40ec6a04d7de19435e646105336aa 171 Gene3D G3DSA:1.20.1550.10 1 171 9.2E-65 T 01-11-2018 IPR023380 DsbB-like superfamily D3790_05920 71e40ec6a04d7de19435e646105336aa 171 SUPERFAMILY SSF158442 15 161 1.7E-46 T 01-11-2018 IPR023380 DsbB-like superfamily D3790_17710 ee64d06ae512747b8b4f8bc17304d090 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 6.3E-16 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_17710 ee64d06ae512747b8b4f8bc17304d090 297 Pfam PF03466 LysR substrate binding domain 94 280 5.0E-18 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_17710 ee64d06ae512747b8b4f8bc17304d090 297 Gene3D G3DSA:3.40.190.10 124 279 1.0E-10 T 01-11-2018 D3790_17710 ee64d06ae512747b8b4f8bc17304d090 297 SUPERFAMILY SSF53850 93 288 3.04E-22 T 01-11-2018 D3790_17710 ee64d06ae512747b8b4f8bc17304d090 297 SUPERFAMILY SSF46785 4 116 7.07E-17 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_17710 ee64d06ae512747b8b4f8bc17304d090 297 Gene3D G3DSA:1.10.10.10 6 94 4.4E-19 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_17710 ee64d06ae512747b8b4f8bc17304d090 297 Gene3D G3DSA:3.40.190.10 171 268 1.0E-10 T 01-11-2018 D3790_17300 6efe86e5b61a60bc366d2b7d49c99644 428 Gene3D G3DSA:3.20.20.140 58 354 1.3E-67 T 01-11-2018 D3790_17300 6efe86e5b61a60bc366d2b7d49c99644 428 SUPERFAMILY SSF51556 57 352 3.4E-48 T 01-11-2018 IPR032466 Metal-dependent hydrolase D3790_17300 6efe86e5b61a60bc366d2b7d49c99644 428 Gene3D G3DSA:2.30.40.10 14 400 1.3E-67 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D3790_17300 6efe86e5b61a60bc366d2b7d49c99644 428 Pfam PF01979 Amidohydrolase family 54 401 5.9E-42 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 D3790_17300 6efe86e5b61a60bc366d2b7d49c99644 428 SUPERFAMILY SSF51338 13 426 6.0E-14 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D3790_19395 96793d001436e5c6f78518921bff63e7 156 SUPERFAMILY SSF54534 4 143 3.93E-33 T 01-11-2018 D3790_19395 96793d001436e5c6f78518921bff63e7 156 Gene3D G3DSA:3.10.50.40 14 142 6.9E-38 T 01-11-2018 D3790_19395 96793d001436e5c6f78518921bff63e7 156 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 140 1.2E-11 T 01-11-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D3790_19395 96793d001436e5c6f78518921bff63e7 156 Gene3D G3DSA:2.40.10.330 73 129 6.9E-38 T 01-11-2018 D3790_13820 eea6c38fe90940078a8fca08ae9f3f39 866 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 01-11-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 D3790_13820 eea6c38fe90940078a8fca08ae9f3f39 866 Pfam PF12633 Adenylate cyclase NT domain 5 200 9.1E-78 T 01-11-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 D3790_13820 eea6c38fe90940078a8fca08ae9f3f39 866 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 602 616 - T 01-11-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 D3790_13820 eea6c38fe90940078a8fca08ae9f3f39 866 Pfam PF01295 Adenylate cyclase, class-I 228 827 2.3E-260 T 01-11-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 D3790_13820 eea6c38fe90940078a8fca08ae9f3f39 866 PIRSF PIRSF001444 1 850 0.0 T 01-11-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 459 1.6E-148 T 01-11-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 SUPERFAMILY SSF55424 343 466 4.12E-39 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 Gene3D G3DSA:3.30.390.30 346 467 7.4E-45 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 01-11-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 SUPERFAMILY SSF51905 2 337 1.67E-56 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 4.3E-35 T 01-11-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.6E-69 T 01-11-2018 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.6E-69 T 01-11-2018 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.6E-69 T 01-11-2018 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.6E-69 T 01-11-2018 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.6E-69 T 01-11-2018 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.6E-69 T 01-11-2018 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.6E-69 T 01-11-2018 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.6E-69 T 01-11-2018 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.6E-69 T 01-11-2018 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 PIRSF PIRSF000350 1 468 1.4E-85 T 01-11-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 Gene3D G3DSA:3.50.50.60 150 271 2.8E-124 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 Gene3D G3DSA:3.50.50.60 9 332 2.8E-124 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 1.0E-61 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.8E-41 T 01-11-2018 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 3.8E-41 T 01-11-2018 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 3.8E-41 T 01-11-2018 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 3.8E-41 T 01-11-2018 D3790_10840 e088db1bb6e27e6b777fab521d18e15f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 3.8E-41 T 01-11-2018 D3790_17675 eb0685a038e6d965adcd8ac0bf37c295 196 Pfam PF13580 SIS domain 9 144 6.8E-33 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 D3790_17675 eb0685a038e6d965adcd8ac0bf37c295 196 Gene3D G3DSA:3.40.50.10490 2 196 1.9E-66 T 01-11-2018 D3790_17675 eb0685a038e6d965adcd8ac0bf37c295 196 SUPERFAMILY SSF53697 3 191 9.71E-49 T 01-11-2018 D3790_01375 4994486ceed02c4321f0dca7f4a447bd 79 SUPERFAMILY SSF47336 5 62 3.53E-9 T 01-11-2018 IPR036736 ACP-like superfamily D3790_01375 4994486ceed02c4321f0dca7f4a447bd 79 Gene3D G3DSA:1.10.1200.10 4 72 7.2E-9 T 01-11-2018 IPR036736 ACP-like superfamily D3790_01375 4994486ceed02c4321f0dca7f4a447bd 79 Pfam PF00550 Phosphopantetheine attachment site 7 61 2.6E-6 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_01375 4994486ceed02c4321f0dca7f4a447bd 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site D3790_17605 663421a12dee78fc69f8a78d536f5348 142 Pfam PF00572 Ribosomal protein L13 15 138 2.5E-57 T 01-11-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 D3790_17605 663421a12dee78fc69f8a78d536f5348 142 Gene3D G3DSA:3.90.1180.10 1 142 8.7E-66 T 01-11-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 D3790_17605 663421a12dee78fc69f8a78d536f5348 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 01-11-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 D3790_17605 663421a12dee78fc69f8a78d536f5348 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.842 T 01-11-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 D3790_17605 663421a12dee78fc69f8a78d536f5348 142 SUPERFAMILY SSF52161 1 140 1.96E-61 T 01-11-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 D3790_17605 663421a12dee78fc69f8a78d536f5348 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 7.2E-68 T 01-11-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_17605 663421a12dee78fc69f8a78d536f5348 142 PIRSF PIRSF002181 1 142 3.2E-52 T 01-11-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 D3790_03770 a079cd963ba179597b7c4de63359da10 250 SUPERFAMILY SSF53254 4 247 7.49E-78 T 01-11-2018 IPR029033 Histidine phosphatase superfamily D3790_03770 a079cd963ba179597b7c4de63359da10 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 01-11-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 D3790_03770 a079cd963ba179597b7c4de63359da10 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 2.9E-128 T 01-11-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 D3790_03770 a079cd963ba179597b7c4de63359da10 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 124 2.2E-30 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D3790_03770 a079cd963ba179597b7c4de63359da10 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 130 227 9.3E-7 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D3790_03770 a079cd963ba179597b7c4de63359da10 250 SMART SM00855 5 191 2.8E-29 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D3790_03770 a079cd963ba179597b7c4de63359da10 250 PIRSF PIRSF000709 3 114 6.3E-9 T 01-11-2018 D3790_03770 a079cd963ba179597b7c4de63359da10 250 PIRSF PIRSF000709 148 242 0.0046 T 01-11-2018 D3790_03770 a079cd963ba179597b7c4de63359da10 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 45.989 T 01-11-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 D3790_03770 a079cd963ba179597b7c4de63359da10 250 Gene3D G3DSA:3.40.50.1240 2 250 2.0E-93 T 01-11-2018 IPR029033 Histidine phosphatase superfamily D3790_14170 14996cbbf2126b3a10a556d262d10f8e 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.376 T 01-11-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 D3790_14170 14996cbbf2126b3a10a556d262d10f8e 166 SUPERFAMILY SSF54211 79 159 2.12E-26 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_14170 14996cbbf2126b3a10a556d262d10f8e 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 01-11-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site D3790_14170 14996cbbf2126b3a10a556d262d10f8e 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 2.9E-29 T 01-11-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 D3790_14170 14996cbbf2126b3a10a556d262d10f8e 166 Gene3D G3DSA:3.30.160.20 1 72 2.4E-33 T 01-11-2018 D3790_14170 14996cbbf2126b3a10a556d262d10f8e 166 Gene3D G3DSA:3.30.230.10 74 166 1.1E-37 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3790_14170 14996cbbf2126b3a10a556d262d10f8e 166 SUPERFAMILY SSF54768 9 75 1.57E-23 T 01-11-2018 D3790_14170 14996cbbf2126b3a10a556d262d10f8e 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 5.4E-70 T 01-11-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 D3790_14170 14996cbbf2126b3a10a556d262d10f8e 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 6.3E-29 T 01-11-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 D3790_12170 b45b5ef00dcfa71c412c0e04fb174584 283 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 281 5.0E-156 T 01-11-2018 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase GO:0008687 KEGG: 00350+1.13.11.15 D3790_12170 b45b5ef00dcfa71c412c0e04fb174584 283 Gene3D G3DSA:3.40.830.10 1 283 2.7E-84 T 01-11-2018 D3790_12170 b45b5ef00dcfa71c412c0e04fb174584 283 SUPERFAMILY SSF53213 12 279 3.79E-51 T 01-11-2018 D3790_12170 b45b5ef00dcfa71c412c0e04fb174584 283 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 279 7.5E-86 T 01-11-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 D3790_01955 5ac1f9f1dec7635b73f9e62011f05445 151 SUPERFAMILY SSF158682 23 150 1.24E-18 T 01-11-2018 IPR029024 TerB-like D3790_01955 5ac1f9f1dec7635b73f9e62011f05445 151 Pfam PF05099 Tellurite resistance protein TerB 15 150 1.8E-24 T 01-11-2018 IPR007791 Co-chaperone DjlA, N-terminal D3790_01955 5ac1f9f1dec7635b73f9e62011f05445 151 Gene3D G3DSA:1.10.3680.10 1 151 3.0E-45 T 01-11-2018 IPR029024 TerB-like D3790_09995 da115e9832a67856f6ca43e1377787ea 76 SMART SM00357 3 67 3.0E-27 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 D3790_09995 da115e9832a67856f6ca43e1377787ea 76 PIRSF PIRSF002599 1 75 2.3E-22 T 01-11-2018 IPR012156 Cold shock, CspA GO:0003676 D3790_09995 da115e9832a67856f6ca43e1377787ea 76 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 1.8E-28 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_09995 da115e9832a67856f6ca43e1377787ea 76 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 8.8E-41 T 01-11-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 D3790_09995 da115e9832a67856f6ca43e1377787ea 76 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 01-11-2018 IPR019844 Cold-shock conserved site D3790_09995 da115e9832a67856f6ca43e1377787ea 76 Gene3D G3DSA:2.40.50.140 2 65 2.1E-25 T 01-11-2018 D3790_09995 da115e9832a67856f6ca43e1377787ea 76 PRINTS PR00050 Cold shock protein signature 4 19 2.8E-15 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_09995 da115e9832a67856f6ca43e1377787ea 76 PRINTS PR00050 Cold shock protein signature 25 34 2.8E-15 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_09995 da115e9832a67856f6ca43e1377787ea 76 PRINTS PR00050 Cold shock protein signature 40 58 2.8E-15 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D3790_09995 da115e9832a67856f6ca43e1377787ea 76 SUPERFAMILY SSF50249 1 66 1.18E-22 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_01410 2d381830c9ec4f600369e131f9e0bab6 335 SUPERFAMILY SSF56349 10 317 1.15E-37 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_01410 2d381830c9ec4f600369e131f9e0bab6 335 Gene3D G3DSA:1.10.150.130 3 111 4.0E-7 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal D3790_01410 2d381830c9ec4f600369e131f9e0bab6 335 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 16 92 6.4E-6 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 D3790_01410 2d381830c9ec4f600369e131f9e0bab6 335 Pfam PF00589 Phage integrase family 157 315 2.5E-19 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D3790_01410 2d381830c9ec4f600369e131f9e0bab6 335 Gene3D G3DSA:1.10.443.10 112 327 5.0E-26 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_12160 6022de95a4d23ae1d88703f4e7305b11 490 Gene3D G3DSA:3.40.309.10 263 452 9.8E-183 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D3790_12160 6022de95a4d23ae1d88703f4e7305b11 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 284 295 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 D3790_12160 6022de95a4d23ae1d88703f4e7305b11 490 Gene3D G3DSA:3.40.605.10 20 475 9.8E-183 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D3790_12160 6022de95a4d23ae1d88703f4e7305b11 490 Pfam PF00171 Aldehyde dehydrogenase family 20 479 7.5E-171 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D3790_12160 6022de95a4d23ae1d88703f4e7305b11 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 D3790_12160 6022de95a4d23ae1d88703f4e7305b11 490 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 31 478 2.5E-219 T 01-11-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 D3790_12160 6022de95a4d23ae1d88703f4e7305b11 490 SUPERFAMILY SSF53720 5 483 1.31E-171 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D3790_07285 695d5386a5da4b43e98f223403c0b11c 231 SUPERFAMILY SSF53067 5 106 2.5E-29 T 01-11-2018 D3790_07285 695d5386a5da4b43e98f223403c0b11c 231 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 220 8.0E-70 T 01-11-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 D3790_07285 695d5386a5da4b43e98f223403c0b11c 231 Pfam PF00814 Glycoprotease family 31 152 1.8E-28 T 01-11-2018 IPR000905 Gcp-like domain D3790_07285 695d5386a5da4b43e98f223403c0b11c 231 Gene3D G3DSA:3.30.420.40 5 223 4.4E-84 T 01-11-2018 D3790_07285 695d5386a5da4b43e98f223403c0b11c 231 Gene3D G3DSA:3.30.420.40 96 189 4.4E-84 T 01-11-2018 D3790_07285 695d5386a5da4b43e98f223403c0b11c 231 SUPERFAMILY SSF53067 111 218 1.09E-29 T 01-11-2018 D3790_11470 4460b93e13da9c78a3afe93a4323dd9e 202 Gene3D G3DSA:1.10.8.420 1 53 2.1E-19 T 01-11-2018 D3790_11470 4460b93e13da9c78a3afe93a4323dd9e 202 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 01-11-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 D3790_11470 4460b93e13da9c78a3afe93a4323dd9e 202 Gene3D G3DSA:3.40.1360.10 77 199 1.6E-39 T 01-11-2018 D3790_11470 4460b93e13da9c78a3afe93a4323dd9e 202 SUPERFAMILY SSF111304 2 199 1.83E-71 T 01-11-2018 IPR023627 Recombination protein RecR D3790_11470 4460b93e13da9c78a3afe93a4323dd9e 202 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 102.913 T 01-11-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 D3790_11470 4460b93e13da9c78a3afe93a4323dd9e 202 Pfam PF02132 RecR protein 41 77 6.5E-15 T 01-11-2018 IPR023628 Recombination protein RecR, C4-type zinc finger D3790_11470 4460b93e13da9c78a3afe93a4323dd9e 202 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 1.2E-79 T 01-11-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 D3790_11470 4460b93e13da9c78a3afe93a4323dd9e 202 Pfam PF13662 Toprim domain 82 172 1.4E-22 T 01-11-2018 IPR006171 TOPRIM domain D3790_11470 4460b93e13da9c78a3afe93a4323dd9e 202 SMART SM00493 81 166 1.3E-17 T 01-11-2018 IPR006171 TOPRIM domain D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 SUPERFAMILY SSF49373 433 523 4.51E-18 T 01-11-2018 IPR008964 Invasin/intimin cell-adhesion fragments D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 Pfam PF02369 Bacterial Ig-like domain (group 1) 630 699 1.0E-7 T 01-11-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 Pfam PF02369 Bacterial Ig-like domain (group 1) 436 514 8.2E-12 T 01-11-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 Pfam PF02369 Bacterial Ig-like domain (group 1) 810 891 4.0E-10 T 01-11-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 Pfam PF02369 Bacterial Ig-like domain (group 1) 533 611 1.3E-7 T 01-11-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 Pfam PF02369 Bacterial Ig-like domain (group 1) 716 795 9.0E-9 T 01-11-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 SUPERFAMILY SSF49373 622 702 5.89E-15 T 01-11-2018 IPR008964 Invasin/intimin cell-adhesion fragments D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 Pfam PF11924 Inverse autotransporter, beta-domain 53 326 3.5E-98 T 01-11-2018 IPR024519 Inverse autotransporter, beta-domain D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 SUPERFAMILY SSF49373 528 612 2.16E-16 T 01-11-2018 IPR008964 Invasin/intimin cell-adhesion fragments D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 SMART SM00634 807 895 1.6E-13 T 01-11-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 SMART SM00634 713 799 3.5E-11 T 01-11-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 SMART SM00634 525 613 7.6E-8 T 01-11-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 SMART SM00634 619 703 1.3E-6 T 01-11-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 SMART SM00634 431 518 1.5E-15 T 01-11-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 Gene3D G3DSA:2.60.40.10 433 521 1.1E-19 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 Gene3D G3DSA:2.60.40.10 715 803 1.4E-16 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 Gene3D G3DSA:2.60.40.10 621 709 4.3E-16 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 Gene3D G3DSA:2.60.40.10 528 617 1.0E-17 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 Gene3D G3DSA:2.60.40.10 808 899 4.8E-19 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 PRINTS PR01369 Intimin signature 274 293 2.1E-6 T 01-11-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 PRINTS PR01369 Intimin signature 206 225 2.1E-6 T 01-11-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 PRINTS PR01369 Intimin signature 178 193 2.1E-6 T 01-11-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 SUPERFAMILY SSF49373 714 800 5.89E-17 T 01-11-2018 IPR008964 Invasin/intimin cell-adhesion fragments D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 Gene3D G3DSA:2.40.160.160 89 333 3.0E-95 T 01-11-2018 IPR038177 Inverse autotransporter, beta-domain superfamily D3790_00835 bcd8250965e7c6a804353db5341ef4fc 1087 SUPERFAMILY SSF49373 808 897 2.16E-18 T 01-11-2018 IPR008964 Invasin/intimin cell-adhesion fragments D3790_16020 5eba68a0657aa9c07232265c605d81b8 255 Gene3D G3DSA:1.25.40.590 31 190 2.8E-51 T 01-11-2018 IPR038522 Type IV / VI secretion system, DotU superfamily D3790_16020 5eba68a0657aa9c07232265c605d81b8 255 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 34 243 7.5E-62 T 01-11-2018 IPR017732 Type IV / VI secretion system, DotU D3790_16020 5eba68a0657aa9c07232265c605d81b8 255 Pfam PF09850 Type VI secretion system protein DotU 35 236 2.1E-57 T 01-11-2018 IPR017732 Type IV / VI secretion system, DotU D3790_04595 c6718ccb3da8326c1d76d2f98f24d4bc 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_04595 c6718ccb3da8326c1d76d2f98f24d4bc 216 SMART SM00448 4 120 5.1E-14 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_04595 c6718ccb3da8326c1d76d2f98f24d4bc 216 Gene3D G3DSA:3.40.50.2300 1 142 8.1E-29 T 01-11-2018 D3790_04595 c6718ccb3da8326c1d76d2f98f24d4bc 216 SUPERFAMILY SSF52172 3 135 1.04E-21 T 01-11-2018 IPR011006 CheY-like superfamily D3790_04595 c6718ccb3da8326c1d76d2f98f24d4bc 216 SUPERFAMILY SSF46894 148 206 1.02E-15 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D3790_04595 c6718ccb3da8326c1d76d2f98f24d4bc 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 3.0E-17 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_04595 c6718ccb3da8326c1d76d2f98f24d4bc 216 Gene3D G3DSA:1.10.10.10 143 208 4.8E-13 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_04595 c6718ccb3da8326c1d76d2f98f24d4bc 216 SMART SM00421 148 205 2.7E-14 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_04595 c6718ccb3da8326c1d76d2f98f24d4bc 216 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.656 T 01-11-2018 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 D3790_04595 c6718ccb3da8326c1d76d2f98f24d4bc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 8.0E-8 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_04595 c6718ccb3da8326c1d76d2f98f24d4bc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 8.0E-8 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_04595 c6718ccb3da8326c1d76d2f98f24d4bc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 8.0E-8 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D3790_04595 c6718ccb3da8326c1d76d2f98f24d4bc 216 Pfam PF00072 Response regulator receiver domain 6 120 4.9E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_07745 ec0c740965dc49dd2586c1f5723cef53 330 SUPERFAMILY SSF54060 27 238 4.83E-85 T 01-11-2018 D3790_07745 ec0c740965dc49dd2586c1f5723cef53 330 Pfam PF04231 Endonuclease I 30 237 4.8E-57 T 01-11-2018 IPR007346 Endonuclease I GO:0004518 D3790_07745 ec0c740965dc49dd2586c1f5723cef53 330 SUPERFAMILY SSF57884 272 329 1.11E-6 T 01-11-2018 IPR035451 Ada-like domain superfamily D3790_03125 ed4d2e7e78435257fc37d5a7cd255352 271 SUPERFAMILY SSF52540 14 238 4.66E-60 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_03125 ed4d2e7e78435257fc37d5a7cd255352 271 Gene3D G3DSA:3.40.50.300 6 265 4.7E-65 T 01-11-2018 D3790_03125 ed4d2e7e78435257fc37d5a7cd255352 271 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_03125 ed4d2e7e78435257fc37d5a7cd255352 271 SMART SM00382 38 226 7.6E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_03125 ed4d2e7e78435257fc37d5a7cd255352 271 Pfam PF00005 ABC transporter 30 177 1.6E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_06435 5b0604c3891678c17cb5bb90bf906071 290 SMART SM00481 12 79 4.5E-15 T 01-11-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal D3790_06435 5b0604c3891678c17cb5bb90bf906071 290 Gene3D G3DSA:1.10.150.650 107 178 2.0E-78 T 01-11-2018 D3790_06435 5b0604c3891678c17cb5bb90bf906071 290 Gene3D G3DSA:3.20.20.140 13 259 2.0E-78 T 01-11-2018 D3790_06435 5b0604c3891678c17cb5bb90bf906071 290 Pfam PF02811 PHP domain 13 99 1.7E-8 T 01-11-2018 IPR004013 PHP domain GO:0003824 D3790_06435 5b0604c3891678c17cb5bb90bf906071 290 SUPERFAMILY SSF89550 8 286 3.92E-54 T 01-11-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 D3790_16795 d5c21bcbe8c4d633e858e5763e8375f5 119 SUPERFAMILY SSF75169 1 119 4.32E-34 T 01-11-2018 IPR027396 DsrEFH-like D3790_16795 d5c21bcbe8c4d633e858e5763e8375f5 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 119 6.3E-45 T 01-11-2018 IPR017462 Sulphur relay, TusC/DsrF D3790_16795 d5c21bcbe8c4d633e858e5763e8375f5 119 Gene3D G3DSA:3.40.1260.10 1 119 3.9E-37 T 01-11-2018 IPR027396 DsrEFH-like D3790_16795 d5c21bcbe8c4d633e858e5763e8375f5 119 Hamap MF_00389 Protein TusC [tusC]. 1 119 34.101 T 01-11-2018 IPR037450 Sulphur relay, TusC D3790_16795 d5c21bcbe8c4d633e858e5763e8375f5 119 Pfam PF02635 DsrE/DsrF-like family 2 119 2.7E-21 T 01-11-2018 IPR003787 Sulphur relay, DsrE/F-like protein D3790_15685 a023e2617a3e6a5d818ab82a5308f50a 183 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 25 137 2.0E-42 T 01-11-2018 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 D3790_15685 a023e2617a3e6a5d818ab82a5308f50a 183 SUPERFAMILY SSF54637 13 133 4.66E-27 T 01-11-2018 IPR029069 HotDog domain superfamily D3790_15685 a023e2617a3e6a5d818ab82a5308f50a 183 Gene3D G3DSA:3.10.129.10 6 153 2.4E-49 T 01-11-2018 D3790_15685 a023e2617a3e6a5d818ab82a5308f50a 183 Pfam PF03061 Thioesterase superfamily 55 128 1.6E-14 T 01-11-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 D3790_15685 a023e2617a3e6a5d818ab82a5308f50a 183 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 23 135 2.2E-27 T 01-11-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 D3790_04095 1d9ebb2326bdc5a6055a0d00599b8b57 335 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 7.2E-101 T 01-11-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 D3790_04095 1d9ebb2326bdc5a6055a0d00599b8b57 335 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 45.456 T 01-11-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 D3790_14100 e73fcd050463379a9ebfac524cc04803 315 SUPERFAMILY SSF50486 208 309 9.26E-37 T 01-11-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 D3790_14100 e73fcd050463379a9ebfac524cc04803 315 Gene3D G3DSA:3.40.50.170 1 209 5.2E-85 T 01-11-2018 D3790_14100 e73fcd050463379a9ebfac524cc04803 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 01-11-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D3790_14100 e73fcd050463379a9ebfac524cc04803 315 SUPERFAMILY SSF53328 5 207 1.07E-66 T 01-11-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D3790_14100 e73fcd050463379a9ebfac524cc04803 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 5.9E-31 T 01-11-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D3790_14100 e73fcd050463379a9ebfac524cc04803 315 Pfam PF00551 Formyl transferase 6 183 3.7E-48 T 01-11-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D3790_14100 e73fcd050463379a9ebfac524cc04803 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 2.5E-109 T 01-11-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 D3790_14100 e73fcd050463379a9ebfac524cc04803 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 36.7 T 01-11-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 D3790_14100 e73fcd050463379a9ebfac524cc04803 315 Gene3D G3DSA:3.10.25.10 210 315 1.3E-38 T 01-11-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D3790_11310 048f5048ee009331cc3593a3572f2eea 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 01-11-2018 IPR033135 ClpP, histidine active site D3790_11310 048f5048ee009331cc3593a3572f2eea 207 SUPERFAMILY SSF52096 24 206 5.47E-75 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily D3790_11310 048f5048ee009331cc3593a3572f2eea 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 204 1.0E-108 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D3790_11310 048f5048ee009331cc3593a3572f2eea 207 Pfam PF00574 Clp protease 26 205 7.6E-90 T 01-11-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA D3790_11310 048f5048ee009331cc3593a3572f2eea 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 01-11-2018 IPR018215 ClpP, Ser active site D3790_11310 048f5048ee009331cc3593a3572f2eea 207 Gene3D G3DSA:3.90.226.10 5 207 1.5E-84 T 01-11-2018 D3790_11310 048f5048ee009331cc3593a3572f2eea 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.38 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D3790_11310 048f5048ee009331cc3593a3572f2eea 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.2E-53 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D3790_11310 048f5048ee009331cc3593a3572f2eea 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.2E-53 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D3790_11310 048f5048ee009331cc3593a3572f2eea 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.2E-53 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D3790_11310 048f5048ee009331cc3593a3572f2eea 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.2E-53 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D3790_11310 048f5048ee009331cc3593a3572f2eea 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.2E-53 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D3790_10600 0041ae959f9c51353d68a5d5b2c64161 504 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 20 504 45.246 T 01-11-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D3790_10600 0041ae959f9c51353d68a5d5b2c64161 504 SUPERFAMILY SSF55681 161 501 3.25E-124 T 01-11-2018 D3790_10600 0041ae959f9c51353d68a5d5b2c64161 504 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 500 3.7E-84 T 01-11-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_10600 0041ae959f9c51353d68a5d5b2c64161 504 Gene3D G3DSA:3.30.930.10 154 498 2.7E-136 T 01-11-2018 D3790_10600 0041ae959f9c51353d68a5d5b2c64161 504 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 13 504 5.1E-227 T 01-11-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D3790_10600 0041ae959f9c51353d68a5d5b2c64161 504 SUPERFAMILY SSF50249 13 154 5.88E-48 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_10600 0041ae959f9c51353d68a5d5b2c64161 504 Pfam PF01336 OB-fold nucleic acid binding domain 67 145 1.2E-15 T 01-11-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 D3790_10600 0041ae959f9c51353d68a5d5b2c64161 504 PIRSF PIRSF039101 1 504 8.1E-199 T 01-11-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D3790_10600 0041ae959f9c51353d68a5d5b2c64161 504 Gene3D G3DSA:2.40.50.140 14 153 4.4E-43 T 01-11-2018 D3790_10600 0041ae959f9c51353d68a5d5b2c64161 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 2.0E-38 T 01-11-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D3790_10600 0041ae959f9c51353d68a5d5b2c64161 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 2.0E-38 T 01-11-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D3790_10600 0041ae959f9c51353d68a5d5b2c64161 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 2.0E-38 T 01-11-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D3790_10600 0041ae959f9c51353d68a5d5b2c64161 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 2.0E-38 T 01-11-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D3790_10600 0041ae959f9c51353d68a5d5b2c64161 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 385 401 2.0E-38 T 01-11-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D3790_14270 b6d16728896bb7f23d89050b0485e280 158 Pfam PF00210 Ferritin-like domain 8 144 1.4E-40 T 01-11-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 D3790_14270 b6d16728896bb7f23d89050b0485e280 158 PRINTS PR00601 Bacterioferritin signature 86 106 4.6E-76 T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D3790_14270 b6d16728896bb7f23d89050b0485e280 158 PRINTS PR00601 Bacterioferritin signature 3 22 4.6E-76 T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D3790_14270 b6d16728896bb7f23d89050b0485e280 158 PRINTS PR00601 Bacterioferritin signature 65 85 4.6E-76 T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D3790_14270 b6d16728896bb7f23d89050b0485e280 158 PRINTS PR00601 Bacterioferritin signature 23 43 4.6E-76 T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D3790_14270 b6d16728896bb7f23d89050b0485e280 158 PRINTS PR00601 Bacterioferritin signature 128 149 4.6E-76 T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D3790_14270 b6d16728896bb7f23d89050b0485e280 158 PRINTS PR00601 Bacterioferritin signature 44 64 4.6E-76 T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D3790_14270 b6d16728896bb7f23d89050b0485e280 158 PRINTS PR00601 Bacterioferritin signature 107 127 4.6E-76 T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D3790_14270 b6d16728896bb7f23d89050b0485e280 158 PIRSF PIRSF002560 1 157 1.9E-72 T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D3790_14270 b6d16728896bb7f23d89050b0485e280 158 Gene3D G3DSA:1.20.1260.10 1 157 5.5E-72 T 01-11-2018 IPR012347 Ferritin-like D3790_14270 b6d16728896bb7f23d89050b0485e280 158 SUPERFAMILY SSF47240 1 154 7.27E-55 T 01-11-2018 IPR009078 Ferritin-like superfamily D3790_14270 b6d16728896bb7f23d89050b0485e280 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D3790_14270 b6d16728896bb7f23d89050b0485e280 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 156 7.8E-80 T 01-11-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D3790_02155 ea1546ba78735cc37c9361e899296524 144 Gene3D G3DSA:3.30.530.20 3 143 3.4E-40 T 01-11-2018 IPR023393 START-like domain superfamily D3790_02155 ea1546ba78735cc37c9361e899296524 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 1.1E-32 T 01-11-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 D3790_02155 ea1546ba78735cc37c9361e899296524 144 SUPERFAMILY SSF55961 1 142 7.41E-35 T 01-11-2018 D3790_12585 c317e12e9290f7a5cd6a5ce3eedbedc0 613 Gene3D G3DSA:1.10.1200.10 529 611 1.2E-9 T 01-11-2018 IPR036736 ACP-like superfamily D3790_12585 c317e12e9290f7a5cd6a5ce3eedbedc0 613 Pfam PF00550 Phosphopantetheine attachment site 539 601 2.3E-7 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_12585 c317e12e9290f7a5cd6a5ce3eedbedc0 613 Gene3D G3DSA:3.40.50.12780 3 427 1.1E-84 T 01-11-2018 D3790_12585 c317e12e9290f7a5cd6a5ce3eedbedc0 613 SUPERFAMILY SSF47336 533 604 8.24E-10 T 01-11-2018 IPR036736 ACP-like superfamily D3790_12585 c317e12e9290f7a5cd6a5ce3eedbedc0 613 ProSitePatterns PS00455 Putative AMP-binding domain signature. 178 189 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_12585 c317e12e9290f7a5cd6a5ce3eedbedc0 613 SUPERFAMILY SSF56801 8 531 6.15E-102 T 01-11-2018 D3790_12585 c317e12e9290f7a5cd6a5ce3eedbedc0 613 Pfam PF00501 AMP-binding enzyme 18 433 8.5E-68 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_12585 c317e12e9290f7a5cd6a5ce3eedbedc0 613 Gene3D G3DSA:3.30.300.30 428 528 5.2E-23 T 01-11-2018 D3790_12585 c317e12e9290f7a5cd6a5ce3eedbedc0 613 Pfam PF13193 AMP-binding enzyme C-terminal domain 442 514 7.3E-6 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_13640 0be7bef8f29920ee65fec913759ca655 405 SUPERFAMILY SSF56645 30 216 5.24E-21 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 D3790_13640 0be7bef8f29920ee65fec913759ca655 405 PIRSF PIRSF016578 9 402 5.9E-47 T 01-11-2018 D3790_13640 0be7bef8f29920ee65fec913759ca655 405 Gene3D G3DSA:2.40.110.10 127 219 1.2E-17 T 01-11-2018 D3790_13640 0be7bef8f29920ee65fec913759ca655 405 Gene3D G3DSA:1.20.140.10 228 401 1.2E-16 T 01-11-2018 D3790_13640 0be7bef8f29920ee65fec913759ca655 405 Gene3D G3DSA:1.10.540.10 14 125 1.5E-16 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 D3790_02780 8f555b6495a120b6ab46f48bad3a5e1e 301 SUPERFAMILY SSF51621 8 290 2.78E-97 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D3790_02780 8f555b6495a120b6ab46f48bad3a5e1e 301 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 7 291 3.1E-131 T 01-11-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 D3790_02780 8f555b6495a120b6ab46f48bad3a5e1e 301 ProSitePatterns PS00161 Isocitrate lyase signature. 121 126 - T 01-11-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 D3790_02780 8f555b6495a120b6ab46f48bad3a5e1e 301 Pfam PF13714 Phosphoenolpyruvate phosphomutase 12 253 1.3E-49 T 01-11-2018 D3790_02780 8f555b6495a120b6ab46f48bad3a5e1e 301 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 4 292 49.653 T 01-11-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 D3790_02780 8f555b6495a120b6ab46f48bad3a5e1e 301 Gene3D G3DSA:3.20.20.60 4 296 1.4E-103 T 01-11-2018 D3790_19635 6c7f6bcce8a17b2fe4b8178594ed1914 192 Gene3D G3DSA:2.40.160.20 24 192 9.6E-51 T 01-11-2018 D3790_19635 6c7f6bcce8a17b2fe4b8178594ed1914 192 Pfam PF13505 Outer membrane protein beta-barrel domain 10 192 4.7E-19 T 01-11-2018 IPR027385 Outer membrane protein beta-barrel D3790_19635 6c7f6bcce8a17b2fe4b8178594ed1914 192 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 184 192 - T 01-11-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 D3790_19635 6c7f6bcce8a17b2fe4b8178594ed1914 192 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 45 57 2.6E-22 T 01-11-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 D3790_19635 6c7f6bcce8a17b2fe4b8178594ed1914 192 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 91 114 2.6E-22 T 01-11-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 D3790_19635 6c7f6bcce8a17b2fe4b8178594ed1914 192 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 149 170 2.6E-22 T 01-11-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 D3790_19635 6c7f6bcce8a17b2fe4b8178594ed1914 192 SUPERFAMILY SSF56925 31 192 6.02E-21 T 01-11-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D3790_05160 63f5a15e7c7fdce71c5d36159ed0fdab 275 Gene3D G3DSA:3.20.10.10 122 272 1.9E-52 T 01-11-2018 D3790_05160 63f5a15e7c7fdce71c5d36159ed0fdab 275 ProSitePatterns PS00770 Aminotransferases class-IV signature. 174 203 - T 01-11-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 D3790_05160 63f5a15e7c7fdce71c5d36159ed0fdab 275 SUPERFAMILY SSF56752 3 252 6.93E-66 T 01-11-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 D3790_05160 63f5a15e7c7fdce71c5d36159ed0fdab 275 Pfam PF01063 Amino-transferase class IV 25 248 7.9E-49 T 01-11-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 D3790_05160 63f5a15e7c7fdce71c5d36159ed0fdab 275 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 4 268 1.2E-109 T 01-11-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 D3790_05160 63f5a15e7c7fdce71c5d36159ed0fdab 275 Gene3D G3DSA:3.30.470.10 2 108 1.7E-29 T 01-11-2018 D3790_11455 b9365a8a260b14155d59facb97799bbb 183 Pfam PF00156 Phosphoribosyl transferase domain 32 156 3.1E-16 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 D3790_11455 b9365a8a260b14155d59facb97799bbb 183 SUPERFAMILY SSF53271 15 179 1.11E-51 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like D3790_11455 b9365a8a260b14155d59facb97799bbb 183 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 180 37.394 T 01-11-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 D3790_11455 b9365a8a260b14155d59facb97799bbb 183 Gene3D G3DSA:3.40.50.2020 1 183 8.8E-67 T 01-11-2018 D3790_11455 b9365a8a260b14155d59facb97799bbb 183 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 179 4.8E-71 T 01-11-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 D3790_19565 b21c3d3bde461729d25ac65da6fab586 339 SUPERFAMILY SSF51735 1 330 1.23E-62 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_19565 b21c3d3bde461729d25ac65da6fab586 339 Gene3D G3DSA:3.40.50.720 1 334 3.3E-65 T 01-11-2018 D3790_19565 b21c3d3bde461729d25ac65da6fab586 339 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 233 8.6E-31 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 D3790_00955 a38f46ef7f6f5d63658df93c47de6f9f 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 1.4E-20 T 01-11-2018 IPR025161 Putative transposase IS4/IS5 family D3790_00955 a38f46ef7f6f5d63658df93c47de6f9f 253 Pfam PF13586 Transposase DDE domain 163 248 5.7E-18 T 01-11-2018 IPR025668 Transposase DDE domain D3790_11340 36c3056c0faaff96423d934b3a333b5a 626 Pfam PF13624 SurA N-terminal domain 1 169 3.6E-47 T 01-11-2018 D3790_11340 36c3056c0faaff96423d934b3a333b5a 626 SUPERFAMILY SSF109998 40 248 2.82E-28 T 01-11-2018 IPR027304 Trigger factor/SurA domain superfamily D3790_11340 36c3056c0faaff96423d934b3a333b5a 626 Pfam PF13145 PPIC-type PPIASE domain 252 372 1.3E-17 T 01-11-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 D3790_11340 36c3056c0faaff96423d934b3a333b5a 626 SUPERFAMILY SSF54534 227 360 9.81E-20 T 01-11-2018 D3790_11340 36c3056c0faaff96423d934b3a333b5a 626 Gene3D G3DSA:1.10.4030.30 40 197 2.6E-13 T 01-11-2018 D3790_11340 36c3056c0faaff96423d934b3a333b5a 626 Gene3D G3DSA:3.10.50.40 269 368 4.6E-28 T 01-11-2018 D3790_11340 36c3056c0faaff96423d934b3a333b5a 626 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 300 321 - T 01-11-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 D3790_14870 ab990eda39dffaa3ae46a11202592c36 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 8.6E-41 T 01-11-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D3790_14870 ab990eda39dffaa3ae46a11202592c36 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 8.6E-41 T 01-11-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D3790_14870 ab990eda39dffaa3ae46a11202592c36 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 8.6E-41 T 01-11-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D3790_14870 ab990eda39dffaa3ae46a11202592c36 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 8.6E-41 T 01-11-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D3790_14870 ab990eda39dffaa3ae46a11202592c36 156 Pfam PF02556 Preprotein translocase subunit SecB 5 144 4.8E-57 T 01-11-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D3790_14870 ab990eda39dffaa3ae46a11202592c36 156 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.061 T 01-11-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D3790_14870 ab990eda39dffaa3ae46a11202592c36 156 SUPERFAMILY SSF54611 10 142 1.07E-51 T 01-11-2018 IPR035958 SecB-like superfamily D3790_14870 ab990eda39dffaa3ae46a11202592c36 156 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 5 146 3.2E-67 T 01-11-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D3790_14870 ab990eda39dffaa3ae46a11202592c36 156 Gene3D G3DSA:3.10.420.10 1 153 1.6E-61 T 01-11-2018 IPR035958 SecB-like superfamily D3790_17685 a5f814fbeb29a7aa078e57f4bc89b5f1 626 Gene3D G3DSA:3.40.50.2300 396 574 9.8E-27 T 01-11-2018 D3790_17685 a5f814fbeb29a7aa078e57f4bc89b5f1 626 Pfam PF04348 LppC putative lipoprotein 264 581 1.0E-90 T 01-11-2018 IPR007443 Penicillin-binding protein activator LpoA D3790_17685 a5f814fbeb29a7aa078e57f4bc89b5f1 626 Pfam PF04348 LppC putative lipoprotein 87 236 7.9E-25 T 01-11-2018 IPR007443 Penicillin-binding protein activator LpoA D3790_17685 a5f814fbeb29a7aa078e57f4bc89b5f1 626 SUPERFAMILY SSF53822 187 584 3.24E-79 T 01-11-2018 IPR028082 Periplasmic binding protein-like I D3790_17685 a5f814fbeb29a7aa078e57f4bc89b5f1 626 Gene3D G3DSA:1.25.40.650 60 179 3.1E-30 T 01-11-2018 D3790_01215 08f62c73a397fee2fae8a5a7e99ce7d7 296 Pfam PF07514 Putative helicase 32 241 2.7E-31 T 01-11-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative D3790_01215 08f62c73a397fee2fae8a5a7e99ce7d7 296 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 32 241 4.9E-65 T 01-11-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class D3790_01215 08f62c73a397fee2fae8a5a7e99ce7d7 296 Gene3D G3DSA:1.10.3210.40 36 253 3.1E-10 T 01-11-2018 D3790_13615 e28021d75c515abae5f3893207d11b58 418 Pfam PF11741 AMIN domain 42 130 1.4E-6 T 01-11-2018 IPR021731 AMIN domain D3790_13615 e28021d75c515abae5f3893207d11b58 418 Gene3D G3DSA:3.40.630.40 171 416 2.3E-67 T 01-11-2018 D3790_13615 e28021d75c515abae5f3893207d11b58 418 Gene3D G3DSA:2.60.40.3500 20 136 3.2E-12 T 01-11-2018 D3790_13615 e28021d75c515abae5f3893207d11b58 418 SUPERFAMILY SSF53187 185 409 2.2E-50 T 01-11-2018 D3790_13615 e28021d75c515abae5f3893207d11b58 418 SMART SM00646 247 405 6.7E-69 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 D3790_13615 e28021d75c515abae5f3893207d11b58 418 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 187 404 1.6E-46 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 D3790_00740 976612e3dc5e19a4524114b0fe3ecfc7 179 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 71 175 5.2E-40 T 01-11-2018 IPR021300 Integrating conjugative element protein, PFL4695 D3790_00740 976612e3dc5e19a4524114b0fe3ecfc7 179 Pfam PF11072 Protein of unknown function (DUF2859) 31 172 6.7E-53 T 01-11-2018 IPR021300 Integrating conjugative element protein, PFL4695 D3790_09265 71d4cd4666a61b127153a49b9327840a 124 Pfam PF05400 Flagellar protein FliT 21 106 1.2E-18 T 01-11-2018 IPR008622 Flagellar protein FliT D3790_09265 71d4cd4666a61b127153a49b9327840a 124 Gene3D G3DSA:1.20.58.380 2 111 2.2E-32 T 01-11-2018 D3790_10695 c8d7368ad690d3fc1c31d51e940e263e 246 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_10695 c8d7368ad690d3fc1c31d51e940e263e 246 Pfam PF00005 ABC transporter 37 185 9.6E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_10695 c8d7368ad690d3fc1c31d51e940e263e 246 Gene3D G3DSA:3.40.50.300 14 243 1.1E-60 T 01-11-2018 D3790_10695 c8d7368ad690d3fc1c31d51e940e263e 246 SUPERFAMILY SSF52540 16 239 1.3E-67 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_10695 c8d7368ad690d3fc1c31d51e940e263e 246 SMART SM00382 46 241 2.2E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_10050 2c07d7caa002312b93519c062d3f63d2 202 SUPERFAMILY SSF48317 3 199 1.31E-30 T 01-11-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily D3790_10050 2c07d7caa002312b93519c062d3f63d2 202 SMART SM00014 63 169 1.4E-14 T 01-11-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase D3790_10050 2c07d7caa002312b93519c062d3f63d2 202 Gene3D G3DSA:1.20.144.10 94 187 6.7E-15 T 01-11-2018 D3790_10050 2c07d7caa002312b93519c062d3f63d2 202 Pfam PF01569 PAP2 superfamily 75 171 3.0E-10 T 01-11-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase D3790_15585 48069f37abfe5c1c21390961e822819a 119 Pfam PF00825 Ribonuclease P 6 111 1.8E-32 T 01-11-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 D3790_15585 48069f37abfe5c1c21390961e822819a 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 01-11-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 D3790_15585 48069f37abfe5c1c21390961e822819a 119 Gene3D G3DSA:3.30.230.10 1 119 5.3E-44 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3790_15585 48069f37abfe5c1c21390961e822819a 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 115 4.7E-34 T 01-11-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 D3790_15585 48069f37abfe5c1c21390961e822819a 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 98 1.0E-38 T 01-11-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 D3790_15585 48069f37abfe5c1c21390961e822819a 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 18.091 T 01-11-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 D3790_15585 48069f37abfe5c1c21390961e822819a 119 SUPERFAMILY SSF54211 5 115 2.07E-30 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_06540 4b0744c69de4d08fcb46fdea65d56b6b 145 SUPERFAMILY SSF46689 7 120 9.86E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_06540 4b0744c69de4d08fcb46fdea65d56b6b 145 Pfam PF13551 Winged helix-turn helix 18 78 2.3E-11 T 01-11-2018 D3790_18840 3ac2fdbfcc8b950f497921a0113ccaa3 109 SUPERFAMILY SSF50022 1 108 4.03E-36 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 D3790_18840 3ac2fdbfcc8b950f497921a0113ccaa3 109 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 106 2.2E-35 T 01-11-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 D3790_18840 3ac2fdbfcc8b950f497921a0113ccaa3 109 Gene3D G3DSA:2.102.10.10 1 107 1.7E-32 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 D3790_18840 3ac2fdbfcc8b950f497921a0113ccaa3 109 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 106 1.3E-37 T 01-11-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 D3790_17835 3f9560cec6634559ce84adfb1bc9f162 93 Gene3D G3DSA:1.10.260.40 14 92 4.5E-18 T 01-11-2018 D3790_17835 3f9560cec6634559ce84adfb1bc9f162 93 Pfam PF01381 Helix-turn-helix 37 86 1.4E-13 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_17835 3f9560cec6634559ce84adfb1bc9f162 93 SUPERFAMILY SSF47413 21 90 6.97E-19 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_17835 3f9560cec6634559ce84adfb1bc9f162 93 SMART SM00530 33 88 9.2E-12 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_15650 c3519f696b759e56b1110751c80e9b78 87 SUPERFAMILY SSF89447 5 58 3.87E-7 T 01-11-2018 IPR037914 SpoVT-AbrB domain superfamily D3790_15650 c3519f696b759e56b1110751c80e9b78 87 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 41 4.9E-6 T 01-11-2018 IPR007159 SpoVT-AbrB domain GO:0003677 D3790_15650 c3519f696b759e56b1110751c80e9b78 87 Gene3D G3DSA:2.10.260.10 2 84 7.3E-21 T 01-11-2018 D3790_02250 eb1d58ae7f0c2370c2a1a4e09196ac62 245 SUPERFAMILY SSF57863 86 160 4.18E-9 T 01-11-2018 IPR037278 ARFGAP/RecO-like zinc finger D3790_02250 eb1d58ae7f0c2370c2a1a4e09196ac62 245 Pfam PF11967 Recombination protein O N terminal 5 76 3.6E-23 T 01-11-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal D3790_02250 eb1d58ae7f0c2370c2a1a4e09196ac62 245 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 2.7E-37 T 01-11-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 D3790_02250 eb1d58ae7f0c2370c2a1a4e09196ac62 245 Gene3D G3DSA:2.40.50.140 1 78 6.2E-33 T 01-11-2018 D3790_02250 eb1d58ae7f0c2370c2a1a4e09196ac62 245 Gene3D G3DSA:1.20.1440.120 79 242 6.9E-52 T 01-11-2018 D3790_02250 eb1d58ae7f0c2370c2a1a4e09196ac62 245 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 22.52 T 01-11-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 D3790_02250 eb1d58ae7f0c2370c2a1a4e09196ac62 245 SUPERFAMILY SSF50249 5 75 3.6E-14 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_02250 eb1d58ae7f0c2370c2a1a4e09196ac62 245 Pfam PF02565 Recombination protein O C terminal 86 226 5.6E-19 T 01-11-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 D3790_12380 e5dae055eb0326a3bc63c07d94a4efc5 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 2.3E-248 T 01-11-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 D3790_12380 e5dae055eb0326a3bc63c07d94a4efc5 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D3790_12380 e5dae055eb0326a3bc63c07d94a4efc5 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 3.0E-39 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D3790_12380 e5dae055eb0326a3bc63c07d94a4efc5 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D3790_12380 e5dae055eb0326a3bc63c07d94a4efc5 449 SUPERFAMILY SSF56059 83 347 1.61E-68 T 01-11-2018 D3790_12380 e5dae055eb0326a3bc63c07d94a4efc5 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.6E-43 T 01-11-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D3790_12380 e5dae055eb0326a3bc63c07d94a4efc5 449 SMART SM00878 336 441 6.7E-67 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D3790_12380 e5dae055eb0326a3bc63c07d94a4efc5 449 Gene3D G3DSA:3.40.50.20 1 85 3.3E-33 T 01-11-2018 D3790_12380 e5dae055eb0326a3bc63c07d94a4efc5 449 Gene3D G3DSA:3.30.470.20 86 433 9.8E-157 T 01-11-2018 D3790_12380 e5dae055eb0326a3bc63c07d94a4efc5 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 3.2E-84 T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D3790_12380 e5dae055eb0326a3bc63c07d94a4efc5 449 Gene3D G3DSA:3.30.1490.20 131 203 9.8E-157 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D3790_12380 e5dae055eb0326a3bc63c07d94a4efc5 449 SUPERFAMILY SSF51246 331 444 1.94E-44 T 01-11-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 D3790_12380 e5dae055eb0326a3bc63c07d94a4efc5 449 SUPERFAMILY SSF52440 1 113 1.08E-45 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily D3790_13450 b92a462fd81ff82ad8396ac40ef50541 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 1.4E-45 T 01-11-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 D3790_13450 b92a462fd81ff82ad8396ac40ef50541 312 Gene3D G3DSA:3.40.50.720 1 146 3.6E-64 T 01-11-2018 D3790_13450 b92a462fd81ff82ad8396ac40ef50541 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 01-11-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 D3790_13450 b92a462fd81ff82ad8396ac40ef50541 312 Gene3D G3DSA:3.90.110.10 147 311 2.8E-53 T 01-11-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 D3790_13450 b92a462fd81ff82ad8396ac40ef50541 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 308 2.9E-49 T 01-11-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 D3790_13450 b92a462fd81ff82ad8396ac40ef50541 312 PIRSF PIRSF000102 1 310 3.3E-61 T 01-11-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 D3790_13450 b92a462fd81ff82ad8396ac40ef50541 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.6 T 01-11-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 D3790_13450 b92a462fd81ff82ad8396ac40ef50541 312 SUPERFAMILY SSF56327 146 310 2.16E-43 T 01-11-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 D3790_13450 b92a462fd81ff82ad8396ac40ef50541 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 6.7E-134 T 01-11-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 D3790_13450 b92a462fd81ff82ad8396ac40ef50541 312 SUPERFAMILY SSF51735 1 145 5.35E-39 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_16505 eee341c21d8aa3e4837d383078116731 187 SUPERFAMILY SSF48150 5 186 1.26E-79 T 01-11-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 D3790_16505 eee341c21d8aa3e4837d383078116731 187 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 7 185 1.9E-81 T 01-11-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 D3790_16505 eee341c21d8aa3e4837d383078116731 187 Gene3D G3DSA:1.10.340.30 5 187 3.7E-85 T 01-11-2018 D3790_16505 eee341c21d8aa3e4837d383078116731 187 Pfam PF03352 Methyladenine glycosylase 10 185 3.6E-80 T 01-11-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 D3790_11795 34a2a77aa1a29b2413850ad358dae991 262 SUPERFAMILY SSF56399 24 210 1.15E-23 T 01-11-2018 D3790_11795 34a2a77aa1a29b2413850ad358dae991 262 Pfam PF01375 Heat-labile enterotoxin alpha chain 14 195 2.2E-6 T 01-11-2018 IPR001144 Heat-labile enterotoxin, A chain GO:0005615|GO:0009405|GO:0090729 D3790_11795 34a2a77aa1a29b2413850ad358dae991 262 Gene3D G3DSA:3.90.210.10 23 254 1.4E-53 T 01-11-2018 D3790_02320 cab296b4b679ae9787a760fe6e2d1289 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 372 4.6E-15 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 D3790_02320 cab296b4b679ae9787a760fe6e2d1289 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 1.3E-8 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D3790_02320 cab296b4b679ae9787a760fe6e2d1289 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 1.3E-8 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D3790_02320 cab296b4b679ae9787a760fe6e2d1289 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 1.3E-8 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D3790_02320 cab296b4b679ae9787a760fe6e2d1289 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 1.3E-8 T 01-11-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D3790_02320 cab296b4b679ae9787a760fe6e2d1289 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 56.584 T 01-11-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 D3790_02320 cab296b4b679ae9787a760fe6e2d1289 396 SUPERFAMILY SSF63380 149 254 2.55E-27 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel D3790_02320 cab296b4b679ae9787a760fe6e2d1289 396 Gene3D G3DSA:2.40.30.10 149 254 1.1E-32 T 01-11-2018 D3790_02320 cab296b4b679ae9787a760fe6e2d1289 396 Pfam PF00042 Globin 8 102 1.2E-12 T 01-11-2018 IPR000971 Globin GO:0020037 D3790_02320 cab296b4b679ae9787a760fe6e2d1289 396 Gene3D G3DSA:3.40.50.80 255 396 1.7E-33 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3790_02320 cab296b4b679ae9787a760fe6e2d1289 396 Gene3D G3DSA:1.10.490.10 1 142 7.5E-49 T 01-11-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 D3790_02320 cab296b4b679ae9787a760fe6e2d1289 396 SUPERFAMILY SSF52343 254 395 1.96E-35 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3790_02320 cab296b4b679ae9787a760fe6e2d1289 396 Pfam PF00970 Oxidoreductase FAD-binding domain 155 252 5.4E-11 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 D3790_02320 cab296b4b679ae9787a760fe6e2d1289 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 1.1E-6 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D3790_02320 cab296b4b679ae9787a760fe6e2d1289 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 1.1E-6 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D3790_02320 cab296b4b679ae9787a760fe6e2d1289 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 358 366 1.1E-6 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D3790_02320 cab296b4b679ae9787a760fe6e2d1289 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 1.1E-6 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D3790_02320 cab296b4b679ae9787a760fe6e2d1289 396 SUPERFAMILY SSF46458 1 139 5.65E-38 T 01-11-2018 IPR009050 Globin-like superfamily D3790_00490 549b58f3ed1550f251e58f7ccd606052 304 Pfam PF12834 Phage integrase, N-terminal 13 100 2.3E-25 T 01-11-2018 IPR024457 Putative integrase, N-terminal D3790_00490 549b58f3ed1550f251e58f7ccd606052 304 Gene3D G3DSA:1.10.150.130 3 109 8.9E-10 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal D3790_00490 549b58f3ed1550f251e58f7ccd606052 304 Gene3D G3DSA:1.10.443.10 123 295 3.0E-7 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_00490 549b58f3ed1550f251e58f7ccd606052 304 SUPERFAMILY SSF56349 11 260 2.65E-19 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_00490 549b58f3ed1550f251e58f7ccd606052 304 Pfam PF12835 Integrase 113 260 6.9E-60 T 01-11-2018 IPR024456 Integrase catalytic domain, putative D3790_18880 bdc311bcdfa9b8eb4f67ef5b1ade1afc 448 Pfam PF00860 Permease family 26 408 3.0E-75 T 01-11-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 D3790_09035 1dd4d64ebce687a410b41a212ececf94 156 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 8 147 7.6E-26 T 01-11-2018 IPR006522 Phage virion morphogensis protein D3790_09035 1dd4d64ebce687a410b41a212ececf94 156 Pfam PF05069 Phage virion morphogenesis family 8 147 4.0E-32 T 01-11-2018 IPR006522 Phage virion morphogensis protein D3790_07740 06c12d138c25b4ecd13d3cdafcfb0bb9 271 Pfam PF02562 PhoH-like protein 66 270 2.5E-75 T 01-11-2018 IPR003714 PhoH-like protein GO:0005524 D3790_07740 06c12d138c25b4ecd13d3cdafcfb0bb9 271 Gene3D G3DSA:3.40.50.300 63 271 1.6E-62 T 01-11-2018 D3790_07740 06c12d138c25b4ecd13d3cdafcfb0bb9 271 SUPERFAMILY SSF52540 65 243 7.11E-29 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09520 6f152201f8471c4fd84e19a8e2c0ffdc 340 Gene3D G3DSA:2.60.40.1090 191 339 1.2E-26 T 01-11-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 D3790_09520 6f152201f8471c4fd84e19a8e2c0ffdc 340 SUPERFAMILY SSF49401 200 340 1.14E-21 T 01-11-2018 IPR008966 Adhesion domain superfamily D3790_09520 6f152201f8471c4fd84e19a8e2c0ffdc 340 Pfam PF00419 Fimbrial protein 192 339 2.5E-15 T 01-11-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 D3790_02725 0a30c5cbb905f21e52dfaeb5a60bd31d 231 PRINTS PR00783 Major intrinsic protein family signature 167 189 2.8E-53 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D3790_02725 0a30c5cbb905f21e52dfaeb5a60bd31d 231 PRINTS PR00783 Major intrinsic protein family signature 43 67 2.8E-53 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D3790_02725 0a30c5cbb905f21e52dfaeb5a60bd31d 231 PRINTS PR00783 Major intrinsic protein family signature 3 22 2.8E-53 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D3790_02725 0a30c5cbb905f21e52dfaeb5a60bd31d 231 PRINTS PR00783 Major intrinsic protein family signature 137 155 2.8E-53 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D3790_02725 0a30c5cbb905f21e52dfaeb5a60bd31d 231 PRINTS PR00783 Major intrinsic protein family signature 80 99 2.8E-53 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D3790_02725 0a30c5cbb905f21e52dfaeb5a60bd31d 231 PRINTS PR00783 Major intrinsic protein family signature 206 226 2.8E-53 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D3790_02725 0a30c5cbb905f21e52dfaeb5a60bd31d 231 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 223 5.3E-62 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D3790_02725 0a30c5cbb905f21e52dfaeb5a60bd31d 231 SUPERFAMILY SSF81338 2 229 1.83E-67 T 01-11-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 D3790_02725 0a30c5cbb905f21e52dfaeb5a60bd31d 231 Hamap MF_01146 Aquaporin Z [aqpZ]. 2 230 35.507 T 01-11-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 D3790_02725 0a30c5cbb905f21e52dfaeb5a60bd31d 231 Gene3D G3DSA:1.20.1080.10 1 231 3.3E-89 T 01-11-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 D3790_02725 0a30c5cbb905f21e52dfaeb5a60bd31d 231 ProSitePatterns PS00221 MIP family signature. 61 69 - T 01-11-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 D3790_02725 0a30c5cbb905f21e52dfaeb5a60bd31d 231 Pfam PF00230 Major intrinsic protein 3 223 1.7E-51 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D3790_18305 e1a9cd35d7240c896e6ba2a8fbf828f1 445 ProSitePatterns PS00543 HlyD family secretion proteins signature. 409 431 - T 01-11-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 D3790_18305 e1a9cd35d7240c896e6ba2a8fbf828f1 445 SUPERFAMILY SSF111369 247 346 3.53E-5 T 01-11-2018 D3790_18305 e1a9cd35d7240c896e6ba2a8fbf828f1 445 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 26 444 9.0E-119 T 01-11-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 D3790_18305 e1a9cd35d7240c896e6ba2a8fbf828f1 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 366 389 2.7E-62 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D3790_18305 e1a9cd35d7240c896e6ba2a8fbf828f1 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 2.7E-62 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D3790_18305 e1a9cd35d7240c896e6ba2a8fbf828f1 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 342 366 2.7E-62 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D3790_18305 e1a9cd35d7240c896e6ba2a8fbf828f1 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 309 330 2.7E-62 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D3790_18305 e1a9cd35d7240c896e6ba2a8fbf828f1 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 409 424 2.7E-62 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D3790_18305 e1a9cd35d7240c896e6ba2a8fbf828f1 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 34 57 2.7E-62 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D3790_18305 e1a9cd35d7240c896e6ba2a8fbf828f1 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 424 444 2.7E-62 T 01-11-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D3790_18305 e1a9cd35d7240c896e6ba2a8fbf828f1 445 SUPERFAMILY SSF51230 61 106 3.14E-5 T 01-11-2018 IPR011053 Single hybrid motif D3790_18305 e1a9cd35d7240c896e6ba2a8fbf828f1 445 Gene3D G3DSA:2.40.50.100 282 329 5.8E-13 T 01-11-2018 D3790_18305 e1a9cd35d7240c896e6ba2a8fbf828f1 445 Gene3D G3DSA:2.40.50.100 67 131 2.5E-8 T 01-11-2018 D3790_18305 e1a9cd35d7240c896e6ba2a8fbf828f1 445 Pfam PF00529 HlyD membrane-fusion protein of T1SS 37 401 1.1E-17 T 01-11-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D3790_18305 e1a9cd35d7240c896e6ba2a8fbf828f1 445 Gene3D G3DSA:2.40.30.170 330 415 5.8E-13 T 01-11-2018 D3790_18305 e1a9cd35d7240c896e6ba2a8fbf828f1 445 Gene3D G3DSA:1.10.287.470 224 281 5.8E-13 T 01-11-2018 D3790_11430 7a32a9cf5db7d900f5de9615966c1e27 233 Gene3D G3DSA:1.10.357.10 16 232 8.5E-70 T 01-11-2018 D3790_11430 7a32a9cf5db7d900f5de9615966c1e27 233 ProSitePatterns PS01081 TetR-type HTH domain signature. 45 76 - T 01-11-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site D3790_11430 7a32a9cf5db7d900f5de9615966c1e27 233 SUPERFAMILY SSF46689 18 96 1.35E-19 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_11430 7a32a9cf5db7d900f5de9615966c1e27 233 Pfam PF00440 Bacterial regulatory proteins, tetR family 33 77 4.3E-18 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D3790_11430 7a32a9cf5db7d900f5de9615966c1e27 233 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 101 220 3.1E-41 T 01-11-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 D3790_11430 7a32a9cf5db7d900f5de9615966c1e27 233 SUPERFAMILY SSF48498 104 220 4.45E-12 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D3790_11430 7a32a9cf5db7d900f5de9615966c1e27 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 54 77 2.3E-12 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D3790_11430 7a32a9cf5db7d900f5de9615966c1e27 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 46 2.3E-12 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D3790_08320 3248ec451d9097bcfa38fa75d33e6e6f 297 Pfam PF01522 Polysaccharide deacetylase 15 170 1.1E-13 T 01-11-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 D3790_08320 3248ec451d9097bcfa38fa75d33e6e6f 297 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 296 65.514 T 01-11-2018 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 D3790_08320 3248ec451d9097bcfa38fa75d33e6e6f 297 SUPERFAMILY SSF88713 15 275 2.34E-30 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 D3790_08140 da25b4446c4dc5e26dca6b34675fbcf2 126 PIRSF PIRSF005894 13 123 2.9E-51 T 01-11-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 D3790_08140 da25b4446c4dc5e26dca6b34675fbcf2 126 SUPERFAMILY SSF52833 18 117 6.38E-34 T 01-11-2018 IPR036249 Thioredoxin-like superfamily D3790_08140 da25b4446c4dc5e26dca6b34675fbcf2 126 Gene3D G3DSA:3.40.30.10 17 123 2.2E-31 T 01-11-2018 D3790_08140 da25b4446c4dc5e26dca6b34675fbcf2 126 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 20 116 1.2E-45 T 01-11-2018 IPR004480 Monothiol glutaredoxin-related D3790_08140 da25b4446c4dc5e26dca6b34675fbcf2 126 Pfam PF00462 Glutaredoxin 32 96 1.9E-17 T 01-11-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 D3790_06735 436599f11ed9c20a503bef3cde9329c6 57 Gene3D G3DSA:3.40.710.10 1 56 3.1E-15 T 01-11-2018 D3790_06735 436599f11ed9c20a503bef3cde9329c6 57 SUPERFAMILY SSF56601 2 44 3.09E-15 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like D3790_06735 436599f11ed9c20a503bef3cde9329c6 57 Pfam PF00144 Beta-lactamase 2 47 3.7E-11 T 01-11-2018 IPR001466 Beta-lactamase-related D3790_14890 445ba096b45e89a9eb90884a461e84df 616 Gene3D G3DSA:3.40.50.1110 397 609 3.0E-8 T 01-11-2018 IPR036514 SGNH hydrolase superfamily D3790_14890 445ba096b45e89a9eb90884a461e84df 616 SUPERFAMILY SSF52266 407 613 9.71E-11 T 01-11-2018 D3790_14890 445ba096b45e89a9eb90884a461e84df 616 Pfam PF01757 Acyltransferase family 20 333 6.2E-28 T 01-11-2018 IPR002656 Acyltransferase 3 GO:0016747 D3790_05770 c212555aebbab4a024d157e99b660fb4 70 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 11 59 2.6E-17 T 01-11-2018 IPR010260 DNA-binding transcriptional activator AlpA D3790_05770 c212555aebbab4a024d157e99b660fb4 70 Gene3D G3DSA:1.10.238.160 10 68 6.3E-6 T 01-11-2018 D3790_11670 35a131f9071a380795f4cafff83b6051 311 Gene3D G3DSA:1.20.1530.20 171 311 3.5E-9 T 01-11-2018 IPR038770 Sodium/solute symporter superfamily D3790_11670 35a131f9071a380795f4cafff83b6051 311 Pfam PF03547 Membrane transport protein 168 304 7.4E-13 T 01-11-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 D3790_19740 3cbbdb1a73297d72885e6fceb0a9e217 156 SUPERFAMILY SSF53098 3 143 2.4E-57 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_19740 3cbbdb1a73297d72885e6fceb0a9e217 156 Hamap MF_00042 Ribonuclease H [rnhA]. 2 150 36.494 T 01-11-2018 IPR022892 Ribonuclease HI GO:0004523 D3790_19740 3cbbdb1a73297d72885e6fceb0a9e217 156 Pfam PF00075 RNase H 3 141 4.6E-50 T 01-11-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 D3790_19740 3cbbdb1a73297d72885e6fceb0a9e217 156 Gene3D G3DSA:3.30.420.10 1 152 8.2E-58 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_00065 3cbbdb1a73297d72885e6fceb0a9e217 156 SUPERFAMILY SSF53098 3 143 2.4E-57 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_00065 3cbbdb1a73297d72885e6fceb0a9e217 156 Hamap MF_00042 Ribonuclease H [rnhA]. 2 150 36.494 T 01-11-2018 IPR022892 Ribonuclease HI GO:0004523 D3790_00065 3cbbdb1a73297d72885e6fceb0a9e217 156 Pfam PF00075 RNase H 3 141 4.6E-50 T 01-11-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 D3790_00065 3cbbdb1a73297d72885e6fceb0a9e217 156 Gene3D G3DSA:3.30.420.10 1 152 8.2E-58 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_05035 683aace100d4360a676563c6e34bc521 655 Pfam PF00593 TonB dependent receptor 271 653 4.0E-57 T 01-11-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D3790_05035 683aace100d4360a676563c6e34bc521 655 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 157 4.5E-28 T 01-11-2018 IPR012910 TonB-dependent receptor, plug domain D3790_05035 683aace100d4360a676563c6e34bc521 655 SUPERFAMILY SSF56935 33 655 4.16E-125 T 01-11-2018 D3790_05035 683aace100d4360a676563c6e34bc521 655 Gene3D G3DSA:2.170.130.10 33 162 4.8E-39 T 01-11-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D3790_05035 683aace100d4360a676563c6e34bc521 655 Gene3D G3DSA:2.40.170.20 168 655 2.6E-133 T 01-11-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3790_04675 c4b906742b7344c8fec23b449bba5ac8 137 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 4 131 3.8E-27 T 01-11-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 D3790_04675 c4b906742b7344c8fec23b449bba5ac8 137 ProDom PD460230 MEMBRANE STORAGE INNER HAEMIN SYSTEM HMSS PGA BIOFILM PGAD TRANSMEMBRANE 1 131 5.0E-29 T 01-11-2018 D3790_04675 c4b906742b7344c8fec23b449bba5ac8 137 Pfam PF13994 PgaD-like protein 5 129 1.4E-36 T 01-11-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 D3790_05165 c71dfe67553784e79912b3ab58dc2a41 341 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 9 336 31.935 T 01-11-2018 IPR003770 Endolytic murein transglycosylase D3790_05165 c71dfe67553784e79912b3ab58dc2a41 341 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 5 339 1.2E-112 T 01-11-2018 IPR003770 Endolytic murein transglycosylase D3790_05165 c71dfe67553784e79912b3ab58dc2a41 341 Gene3D G3DSA:3.30.160.60 75 112 1.2E-13 T 01-11-2018 D3790_05165 c71dfe67553784e79912b3ab58dc2a41 341 Gene3D G3DSA:3.30.160.60 305 341 1.4E-16 T 01-11-2018 D3790_05165 c71dfe67553784e79912b3ab58dc2a41 341 Pfam PF02618 YceG-like family 45 330 2.3E-78 T 01-11-2018 IPR003770 Endolytic murein transglycosylase D3790_03720 781af1855f62a74d1c7cb3ee5bba0a87 229 Pfam PF01618 MotA/TolQ/ExbB proton channel family 78 207 8.2E-42 T 01-11-2018 IPR002898 MotA/TolQ/ExbB proton channel D3790_03720 781af1855f62a74d1c7cb3ee5bba0a87 229 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 4 224 43.37 T 01-11-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 D3790_03720 781af1855f62a74d1c7cb3ee5bba0a87 229 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 2.1E-94 T 01-11-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 D3790_04845 4e7e260fc3abfbb8f1ccb0ca77e32d7f 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 35.218 T 01-11-2018 IPR007334 Uncharacterised protein family UPF0208 D3790_04845 4e7e260fc3abfbb8f1ccb0ca77e32d7f 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 2.0E-58 T 01-11-2018 IPR007334 Uncharacterised protein family UPF0208 D3790_04615 267ff6562d0a5f6f5e3163467b3106bf 401 Gene3D G3DSA:1.20.1740.10 2 398 1.9E-6 T 01-11-2018 D3790_04615 267ff6562d0a5f6f5e3163467b3106bf 401 PRINTS PR00166 Aromatic amino acid permease signature 82 102 2.7E-77 T 01-11-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D3790_04615 267ff6562d0a5f6f5e3163467b3106bf 401 PRINTS PR00166 Aromatic amino acid permease signature 221 240 2.7E-77 T 01-11-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D3790_04615 267ff6562d0a5f6f5e3163467b3106bf 401 PRINTS PR00166 Aromatic amino acid permease signature 37 56 2.7E-77 T 01-11-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D3790_04615 267ff6562d0a5f6f5e3163467b3106bf 401 PRINTS PR00166 Aromatic amino acid permease signature 182 204 2.7E-77 T 01-11-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D3790_04615 267ff6562d0a5f6f5e3163467b3106bf 401 PRINTS PR00166 Aromatic amino acid permease signature 10 33 2.7E-77 T 01-11-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D3790_04615 267ff6562d0a5f6f5e3163467b3106bf 401 PRINTS PR00166 Aromatic amino acid permease signature 282 301 2.7E-77 T 01-11-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D3790_04615 267ff6562d0a5f6f5e3163467b3106bf 401 PRINTS PR00166 Aromatic amino acid permease signature 148 168 2.7E-77 T 01-11-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D3790_04615 267ff6562d0a5f6f5e3163467b3106bf 401 PRINTS PR00166 Aromatic amino acid permease signature 316 334 2.7E-77 T 01-11-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D3790_04615 267ff6562d0a5f6f5e3163467b3106bf 401 Pfam PF03222 Tryptophan/tyrosine permease family 3 388 3.3E-123 T 01-11-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 D3790_04615 267ff6562d0a5f6f5e3163467b3106bf 401 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 01-11-2018 IPR013061 Tryptophan/tryrosine permease, conserved site D3790_04615 267ff6562d0a5f6f5e3163467b3106bf 401 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 382 2.8E-127 T 01-11-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D3790_13490 faed1cc5112f9691820cb067359d9c3c 215 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 45 200 9.1E-65 T 01-11-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D3790_13490 faed1cc5112f9691820cb067359d9c3c 215 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 44 206 37.165 T 01-11-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D3790_13490 faed1cc5112f9691820cb067359d9c3c 215 SUPERFAMILY SSF55068 13 209 1.31E-77 T 01-11-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D3790_13490 faed1cc5112f9691820cb067359d9c3c 215 Gene3D G3DSA:3.30.1060.10 5 214 2.8E-82 T 01-11-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D3790_13490 faed1cc5112f9691820cb067359d9c3c 215 Pfam PF01625 Peptide methionine sulfoxide reductase 47 200 3.9E-63 T 01-11-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D3790_19300 f3362bda04baa581858561ec1a411c43 374 Gene3D G3DSA:3.40.1090.10 12 114 1.8E-11 T 01-11-2018 D3790_19300 f3362bda04baa581858561ec1a411c43 374 Gene3D G3DSA:3.40.1090.10 115 257 1.2E-7 T 01-11-2018 D3790_19300 f3362bda04baa581858561ec1a411c43 374 Pfam PF01734 Patatin-like phospholipase 28 196 2.8E-17 T 01-11-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 D3790_19300 f3362bda04baa581858561ec1a411c43 374 SUPERFAMILY SSF52151 22 294 5.23E-47 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase D3790_03290 852b091d0c5b14480ec3fde39fb68489 292 Pfam PF03471 Transporter associated domain 206 280 7.3E-20 T 01-11-2018 IPR005170 Transporter-associated domain D3790_03290 852b091d0c5b14480ec3fde39fb68489 292 SUPERFAMILY SSF54631 55 191 3.54E-32 T 01-11-2018 D3790_03290 852b091d0c5b14480ec3fde39fb68489 292 Gene3D G3DSA:3.30.465.10 197 291 6.6E-30 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 D3790_03290 852b091d0c5b14480ec3fde39fb68489 292 SMART SM00116 140 188 0.91 T 01-11-2018 IPR000644 CBS domain D3790_03290 852b091d0c5b14480ec3fde39fb68489 292 SMART SM00116 77 126 9.2 T 01-11-2018 IPR000644 CBS domain D3790_03290 852b091d0c5b14480ec3fde39fb68489 292 Pfam PF00571 CBS domain 68 122 4.6E-8 T 01-11-2018 IPR000644 CBS domain D3790_03290 852b091d0c5b14480ec3fde39fb68489 292 Pfam PF00571 CBS domain 140 188 1.9E-5 T 01-11-2018 IPR000644 CBS domain D3790_03290 852b091d0c5b14480ec3fde39fb68489 292 Gene3D G3DSA:3.10.580.10 50 196 9.2E-57 T 01-11-2018 D3790_03290 852b091d0c5b14480ec3fde39fb68489 292 SUPERFAMILY SSF56176 202 285 1.01E-21 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 D3790_03290 852b091d0c5b14480ec3fde39fb68489 292 SMART SM01091 204 282 7.4E-26 T 01-11-2018 IPR005170 Transporter-associated domain D3790_09025 1547dfc52281261c5dc93b8837bcf543 307 Pfam PF10124 Mu-like prophage major head subunit gpT 9 307 9.1E-129 T 01-11-2018 IPR018774 Bacteriophage Mu, GpT D3790_15405 90fc24866437fac8d8fff44f6eece678 485 Gene3D G3DSA:3.40.50.410 309 448 3.4E-5 T 01-11-2018 IPR036465 von Willebrand factor A-like domain superfamily D3790_15405 90fc24866437fac8d8fff44f6eece678 485 SUPERFAMILY SSF53300 318 461 3.89E-17 T 01-11-2018 IPR036465 von Willebrand factor A-like domain superfamily D3790_15405 90fc24866437fac8d8fff44f6eece678 485 Pfam PF05762 VWA domain containing CoxE-like protein 314 447 9.2E-10 T 01-11-2018 IPR008912 Uncharacterised protein family CoxE-like D3790_15405 90fc24866437fac8d8fff44f6eece678 485 SMART SM00327 321 485 4.4E-5 T 01-11-2018 IPR002035 von Willebrand factor, type A D3790_15405 90fc24866437fac8d8fff44f6eece678 485 Hamap MF_01626 Protein ViaA [viaA]. 1 485 51.531 T 01-11-2018 IPR023481 Uncharacterised protein family ViaA D3790_04320 68b37423d8b0080139ea176f2188b78e 160 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 153 6.7E-49 T 01-11-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 D3790_04320 68b37423d8b0080139ea176f2188b78e 160 SMART SM00855 2 115 0.0086 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D3790_04320 68b37423d8b0080139ea176f2188b78e 160 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 70 1.1E-6 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D3790_04320 68b37423d8b0080139ea176f2188b78e 160 SUPERFAMILY SSF53254 1 143 1.91E-17 T 01-11-2018 IPR029033 Histidine phosphatase superfamily D3790_04320 68b37423d8b0080139ea176f2188b78e 160 Gene3D G3DSA:3.40.50.1240 1 159 3.3E-37 T 01-11-2018 IPR029033 Histidine phosphatase superfamily D3790_09410 03b2ab614bcf22be63715b5f7ea14d3a 353 TIGRFAM TIGR01686 FkbH: FkbH domain 15 322 4.6E-77 T 01-11-2018 IPR010037 FkbH domain D3790_09410 03b2ab614bcf22be63715b5f7ea14d3a 353 SUPERFAMILY SSF56784 15 119 4.75E-14 T 01-11-2018 IPR036412 HAD-like superfamily D3790_09410 03b2ab614bcf22be63715b5f7ea14d3a 353 Gene3D G3DSA:3.40.50.1000 15 160 1.8E-38 T 01-11-2018 IPR023214 HAD superfamily D3790_09410 03b2ab614bcf22be63715b5f7ea14d3a 353 Gene3D G3DSA:3.40.630.30 191 336 4.9E-6 T 01-11-2018 D3790_09410 03b2ab614bcf22be63715b5f7ea14d3a 353 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 16 123 9.4E-17 T 01-11-2018 IPR010033 HAD-superfamily phosphatase, subfamily IIIC D3790_09410 03b2ab614bcf22be63715b5f7ea14d3a 353 Pfam PF13419 Haloacid dehalogenase-like hydrolase 35 120 6.0E-6 T 01-11-2018 D3790_09410 03b2ab614bcf22be63715b5f7ea14d3a 353 SUPERFAMILY SSF55729 188 328 3.1E-5 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_04460 0624143836a9b4b28899877e9caa6799 575 Gene3D G3DSA:3.20.20.60 234 575 5.8E-125 T 01-11-2018 D3790_04460 0624143836a9b4b28899877e9caa6799 575 SUPERFAMILY SSF52009 125 246 5.49E-36 T 01-11-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 D3790_04460 0624143836a9b4b28899877e9caa6799 575 Gene3D G3DSA:3.50.30.10 4 233 8.9E-80 T 01-11-2018 D3790_04460 0624143836a9b4b28899877e9caa6799 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 5.5E-29 T 01-11-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 D3790_04460 0624143836a9b4b28899877e9caa6799 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 5.0E-30 T 01-11-2018 D3790_04460 0624143836a9b4b28899877e9caa6799 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 5.0E-30 T 01-11-2018 D3790_04460 0624143836a9b4b28899877e9caa6799 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 5.0E-30 T 01-11-2018 D3790_04460 0624143836a9b4b28899877e9caa6799 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 5.0E-30 T 01-11-2018 D3790_04460 0624143836a9b4b28899877e9caa6799 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 1.2E-251 T 01-11-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 D3790_04460 0624143836a9b4b28899877e9caa6799 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.8E-22 T 01-11-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 D3790_04460 0624143836a9b4b28899877e9caa6799 575 SUPERFAMILY SSF51621 249 549 1.36E-108 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D3790_04460 0624143836a9b4b28899877e9caa6799 575 SUPERFAMILY SSF47831 25 143 1.2E-33 T 01-11-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 D3790_04460 0624143836a9b4b28899877e9caa6799 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 251 541 9.8E-124 T 01-11-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 D3790_04460 0624143836a9b4b28899877e9caa6799 575 Gene3D G3DSA:1.10.274.10 21 146 8.9E-80 T 01-11-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 D3790_04460 0624143836a9b4b28899877e9caa6799 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 01-11-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 D3790_04460 0624143836a9b4b28899877e9caa6799 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 01-11-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 D3790_04460 0624143836a9b4b28899877e9caa6799 575 PIRSF PIRSF000732 1 574 7.6E-220 T 01-11-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 D3790_17385 2e5d6ae9bbaef3a5b6d30dddeb7dadb0 197 Gene3D G3DSA:1.10.287.1120 147 194 2.6E-9 T 01-11-2018 D3790_17385 2e5d6ae9bbaef3a5b6d30dddeb7dadb0 197 Pfam PF01420 Type I restriction modification DNA specificity domain 47 178 8.2E-16 T 01-11-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 D3790_17385 2e5d6ae9bbaef3a5b6d30dddeb7dadb0 197 Gene3D G3DSA:3.90.220.20 35 146 1.6E-16 T 01-11-2018 D3790_17385 2e5d6ae9bbaef3a5b6d30dddeb7dadb0 197 SUPERFAMILY SSF116734 41 190 1.55E-33 T 01-11-2018 D3790_14970 0dcfa684ee34cfa0a47931220945565e 412 SUPERFAMILY SSF53756 16 412 1.12E-40 T 01-11-2018 D3790_14970 0dcfa684ee34cfa0a47931220945565e 412 Gene3D G3DSA:3.40.50.2000 212 397 6.3E-16 T 01-11-2018 D3790_14970 0dcfa684ee34cfa0a47931220945565e 412 Gene3D G3DSA:3.40.50.2000 1 208 5.0E-17 T 01-11-2018 D3790_14970 0dcfa684ee34cfa0a47931220945565e 412 Pfam PF13439 Glycosyltransferase Family 4 16 203 2.2E-17 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D3790_14970 0dcfa684ee34cfa0a47931220945565e 412 Pfam PF00534 Glycosyl transferases group 1 223 390 1.6E-9 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 D3790_04305 a9cc6878e88d4f980b39585864185007 319 Hamap MF_00737 Formimidoylglutamase [hutG]. 7 315 40.257 T 01-11-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 D3790_04305 a9cc6878e88d4f980b39585864185007 319 Gene3D G3DSA:3.40.800.10 5 319 8.0E-96 T 01-11-2018 D3790_04305 a9cc6878e88d4f980b39585864185007 319 SUPERFAMILY SSF52768 11 317 8.64E-75 T 01-11-2018 IPR023696 Ureohydrolase domain superfamily D3790_04305 a9cc6878e88d4f980b39585864185007 319 PIRSF PIRSF036979 21 319 5.7E-26 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 D3790_04305 a9cc6878e88d4f980b39585864185007 319 TIGRFAM TIGR01227 hutG: formimidoylglutamase 12 314 1.7E-85 T 01-11-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 D3790_04305 a9cc6878e88d4f980b39585864185007 319 Pfam PF00491 Arginase family 45 313 1.4E-51 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 D3790_06660 7eeaf1d9e318eb510fc4930dc3e21b38 325 Gene3D G3DSA:1.20.1530.20 6 325 1.2E-34 T 01-11-2018 IPR038770 Sodium/solute symporter superfamily D3790_06660 7eeaf1d9e318eb510fc4930dc3e21b38 325 PIRSF PIRSF026166 1 325 5.6E-135 T 01-11-2018 IPR016833 Putative sodium bile acid cotransporter D3790_06660 7eeaf1d9e318eb510fc4930dc3e21b38 325 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 10 321 2.8E-105 T 01-11-2018 IPR016833 Putative sodium bile acid cotransporter D3790_03535 d8422fd41d3399855574f90bbeb7b0ae 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 85 107 1.4E-5 T 01-11-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 D3790_03535 d8422fd41d3399855574f90bbeb7b0ae 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 63 81 1.4E-5 T 01-11-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 D3790_03535 d8422fd41d3399855574f90bbeb7b0ae 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 20 36 1.4E-5 T 01-11-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 D3790_03535 d8422fd41d3399855574f90bbeb7b0ae 153 Pfam PF02794 RTX toxin acyltransferase family 18 150 3.3E-44 T 01-11-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 D3790_03245 1d080a3887c48fa80a5ea6762c9f1a0f 246 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 35 245 31.941 T 01-11-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 D3790_03245 1d080a3887c48fa80a5ea6762c9f1a0f 246 Pfam PF01467 Cytidylyltransferase-like 39 219 1.3E-36 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D3790_03245 1d080a3887c48fa80a5ea6762c9f1a0f 246 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 39 244 8.8E-61 T 01-11-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 D3790_03245 1d080a3887c48fa80a5ea6762c9f1a0f 246 Gene3D G3DSA:3.40.50.620 35 245 4.8E-67 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_03245 1d080a3887c48fa80a5ea6762c9f1a0f 246 SUPERFAMILY SSF52374 38 245 1.55E-56 T 01-11-2018 D3790_03245 1d080a3887c48fa80a5ea6762c9f1a0f 246 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 38 100 1.8E-12 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D3790_19175 d81f173164b21e46a8fc58e57552af5c 337 Gene3D G3DSA:1.10.10.10 269 335 3.2E-8 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_19175 d81f173164b21e46a8fc58e57552af5c 337 Pfam PF02661 Fic/DOC family 101 196 1.4E-21 T 01-11-2018 IPR003812 Fido domain D3790_19175 d81f173164b21e46a8fc58e57552af5c 337 SUPERFAMILY SSF46785 278 336 3.45E-9 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_19175 d81f173164b21e46a8fc58e57552af5c 337 Gene3D G3DSA:1.10.3290.10 25 266 6.6E-50 T 01-11-2018 IPR036597 Fido-like domain superfamily D3790_19175 d81f173164b21e46a8fc58e57552af5c 337 SUPERFAMILY SSF140931 79 255 1.83E-40 T 01-11-2018 IPR036597 Fido-like domain superfamily D3790_19175 d81f173164b21e46a8fc58e57552af5c 337 Pfam PF08279 HTH domain 282 333 1.5E-10 T 01-11-2018 IPR013196 Helix-turn-helix, type 11 D3790_09505 d0766da15f20b43728c90a3f44f4c4b7 223 Gene3D G3DSA:2.30.30.760 164 223 8.7E-22 T 01-11-2018 D3790_09505 d0766da15f20b43728c90a3f44f4c4b7 223 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 88 221 2.4E-36 T 01-11-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal D3790_09505 d0766da15f20b43728c90a3f44f4c4b7 223 Pfam PF13144 Chaperone for flagella basal body P-ring formation 30 221 6.3E-47 T 01-11-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal D3790_09505 d0766da15f20b43728c90a3f44f4c4b7 223 SMART SM00858 99 161 3.6E-5 T 01-11-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 D3790_14405 699133d03653ddb86f76a41f0a51455c 125 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 116 2.0E-38 T 01-11-2018 IPR009867 Protein of unknown function DUF1422 D3790_14405 699133d03653ddb86f76a41f0a51455c 125 Pfam PF07226 Protein of unknown function (DUF1422) 2 114 9.5E-52 T 01-11-2018 IPR009867 Protein of unknown function DUF1422 D3790_14085 d4a861839052010b7f13dcf2ba0d7a57 186 PIRSF PIRSF028063 7 55 0.0064 T 01-11-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger D3790_14085 d4a861839052010b7f13dcf2ba0d7a57 186 PIRSF PIRSF028063 43 102 0.078 T 01-11-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger D3790_14085 d4a861839052010b7f13dcf2ba0d7a57 186 PIRSF PIRSF028063 92 145 0.47 T 01-11-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger D3790_14085 d4a861839052010b7f13dcf2ba0d7a57 186 SUPERFAMILY SSF57783 12 49 1.36E-11 T 01-11-2018 D3790_14085 d4a861839052010b7f13dcf2ba0d7a57 186 SUPERFAMILY SSF57783 60 98 1.62E-11 T 01-11-2018 D3790_14085 d4a861839052010b7f13dcf2ba0d7a57 186 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 13 48 5.7E-15 T 01-11-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 D3790_14085 d4a861839052010b7f13dcf2ba0d7a57 186 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 105 142 9.2E-14 T 01-11-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 D3790_14085 d4a861839052010b7f13dcf2ba0d7a57 186 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 62 98 1.4E-14 T 01-11-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 D3790_14085 d4a861839052010b7f13dcf2ba0d7a57 186 Gene3D G3DSA:3.30.65.10 2 52 1.1E-9 T 01-11-2018 D3790_14085 d4a861839052010b7f13dcf2ba0d7a57 186 Gene3D G3DSA:3.30.65.10 53 102 1.5E-8 T 01-11-2018 D3790_02170 c683a3e63da01cced038f1634fcd9b35 558 SUPERFAMILY SSF52540 1 519 1.68E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_02170 c683a3e63da01cced038f1634fcd9b35 558 PIRSF PIRSF003128 1 558 5.6E-154 T 01-11-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 D3790_02170 c683a3e63da01cced038f1634fcd9b35 558 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 557 2.6E-164 T 01-11-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 D3790_02170 c683a3e63da01cced038f1634fcd9b35 558 Gene3D G3DSA:3.40.50.300 316 558 4.7E-51 T 01-11-2018 D3790_02170 c683a3e63da01cced038f1634fcd9b35 558 Gene3D G3DSA:3.40.50.300 1 262 2.8E-44 T 01-11-2018 D3790_02170 c683a3e63da01cced038f1634fcd9b35 558 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 516 8.4E-21 T 01-11-2018 IPR003395 RecF/RecN/SMC, N-terminal D3790_00130 473108ab5515f63043a410cc24e94cb9 294 Pfam PF13612 Transposase DDE domain 104 258 5.9E-74 T 01-11-2018 IPR025668 Transposase DDE domain D3790_01545 473108ab5515f63043a410cc24e94cb9 294 Pfam PF13612 Transposase DDE domain 104 258 5.9E-74 T 01-11-2018 IPR025668 Transposase DDE domain D3790_15875 473108ab5515f63043a410cc24e94cb9 294 Pfam PF13612 Transposase DDE domain 104 258 5.9E-74 T 01-11-2018 IPR025668 Transposase DDE domain D3790_04555 473108ab5515f63043a410cc24e94cb9 294 Pfam PF13612 Transposase DDE domain 104 258 5.9E-74 T 01-11-2018 IPR025668 Transposase DDE domain D3790_04655 d20033cbba3d7f7f24f7a0d0c16262e1 451 Pfam PF00425 chorismate binding enzyme 191 441 1.9E-60 T 01-11-2018 IPR015890 Chorismate-utilising enzyme, C-terminal D3790_04655 d20033cbba3d7f7f24f7a0d0c16262e1 451 Gene3D G3DSA:3.60.120.10 3 451 4.7E-142 T 01-11-2018 IPR005801 ADC synthase GO:0009058 D3790_04655 d20033cbba3d7f7f24f7a0d0c16262e1 451 SUPERFAMILY SSF56322 40 449 4.45E-91 T 01-11-2018 IPR005801 ADC synthase GO:0009058 D3790_04655 d20033cbba3d7f7f24f7a0d0c16262e1 451 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 127 448 7.0E-94 T 01-11-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 D3790_04655 d20033cbba3d7f7f24f7a0d0c16262e1 451 Hamap MF_01935 Isochorismate synthase MenF [menF]. 7 451 28.483 T 01-11-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 D3790_02865 7ec73fe877117130e6da5f8acfafe279 418 SUPERFAMILY SSF103473 4 387 3.27E-36 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_02865 7ec73fe877117130e6da5f8acfafe279 418 Pfam PF07690 Major Facilitator Superfamily 21 271 5.2E-20 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_02865 7ec73fe877117130e6da5f8acfafe279 418 Gene3D G3DSA:1.20.1250.20 6 384 6.4E-30 T 01-11-2018 D3790_03725 0b4431dcd80f0267d8543208f3c58f99 143 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 140 6.2E-24 T 01-11-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 D3790_03725 0b4431dcd80f0267d8543208f3c58f99 143 Gene3D G3DSA:3.30.420.270 59 132 4.2E-24 T 01-11-2018 D3790_03725 0b4431dcd80f0267d8543208f3c58f99 143 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 4 139 27.697 T 01-11-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 D3790_03725 0b4431dcd80f0267d8543208f3c58f99 143 TIGRFAM TIGR02801 tolR: protein TolR 12 139 1.2E-37 T 01-11-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 D3790_13285 79c674935dca0a2d771bdaf8225e748c 83 SUPERFAMILY SSF159871 3 83 3.79E-23 T 01-11-2018 IPR036275 YdgH-like superfamily D3790_13285 79c674935dca0a2d771bdaf8225e748c 83 Gene3D G3DSA:3.30.1660.10 20 83 5.4E-19 T 01-11-2018 IPR025543 Dodecin-like D3790_13285 79c674935dca0a2d771bdaf8225e748c 83 Pfam PF07338 Protein of unknown function (DUF1471) 33 83 6.0E-18 T 01-11-2018 IPR010854 Domain of unknown function DUF1471 D3790_14220 99592677f88ffe993703aac9d8c0923d 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 1.4E-46 T 01-11-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 D3790_14220 99592677f88ffe993703aac9d8c0923d 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 01-11-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14220 99592677f88ffe993703aac9d8c0923d 136 Gene3D G3DSA:3.90.1170.10 1 136 5.2E-55 T 01-11-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 D3790_14220 99592677f88ffe993703aac9d8c0923d 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 8.6E-59 T 01-11-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14220 99592677f88ffe993703aac9d8c0923d 136 SUPERFAMILY SSF54686 3 133 1.31E-54 T 01-11-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 D3790_14220 99592677f88ffe993703aac9d8c0923d 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 8.2E-40 T 01-11-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14220 99592677f88ffe993703aac9d8c0923d 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 8.2E-40 T 01-11-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14220 99592677f88ffe993703aac9d8c0923d 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 8.2E-40 T 01-11-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14220 99592677f88ffe993703aac9d8c0923d 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 8.2E-40 T 01-11-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14220 99592677f88ffe993703aac9d8c0923d 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 38.142 T 01-11-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14220 99592677f88ffe993703aac9d8c0923d 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 01-11-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_13520 73b0fb43c4249def3cb12c5028f7927b 85 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 5.5E-9 T 01-11-2018 IPR007159 SpoVT-AbrB domain GO:0003677 D3790_13520 73b0fb43c4249def3cb12c5028f7927b 85 SMART SM00966 7 52 1.6E-8 T 01-11-2018 IPR007159 SpoVT-AbrB domain GO:0003677 D3790_13520 73b0fb43c4249def3cb12c5028f7927b 85 Gene3D G3DSA:2.10.260.10 1 84 5.7E-13 T 01-11-2018 D3790_13520 73b0fb43c4249def3cb12c5028f7927b 85 SUPERFAMILY SSF89447 5 67 8.37E-12 T 01-11-2018 IPR037914 SpoVT-AbrB domain superfamily D3790_13520 73b0fb43c4249def3cb12c5028f7927b 85 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 13 47 1.4E-8 T 01-11-2018 IPR007159 SpoVT-AbrB domain GO:0003677 D3790_18155 7ec5e422acb2d04067107b9f7a1987ea 176 Pfam PF00293 NUDIX domain 7 146 5.0E-29 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D3790_18155 7ec5e422acb2d04067107b9f7a1987ea 176 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D3790_18155 7ec5e422acb2d04067107b9f7a1987ea 176 Gene3D G3DSA:3.90.79.10 1 160 1.1E-52 T 01-11-2018 D3790_18155 7ec5e422acb2d04067107b9f7a1987ea 176 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 38.004 T 01-11-2018 IPR022927 RNA pyrophosphohydrolase RppH D3790_18155 7ec5e422acb2d04067107b9f7a1987ea 176 SUPERFAMILY SSF55811 6 151 1.9E-33 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D3790_18155 7ec5e422acb2d04067107b9f7a1987ea 176 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.4E-7 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D3790_18155 7ec5e422acb2d04067107b9f7a1987ea 176 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.4E-7 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D3790_13290 b4b662d5a6d7edc79310062d3f7d015a 103 SUPERFAMILY SSF82771 5 76 4.32E-12 T 01-11-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 D3790_13290 b4b662d5a6d7edc79310062d3f7d015a 103 Pfam PF01541 GIY-YIG catalytic domain 6 77 6.0E-14 T 01-11-2018 IPR000305 GIY-YIG endonuclease D3790_13290 b4b662d5a6d7edc79310062d3f7d015a 103 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 3 95 29.102 T 01-11-2018 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease D3790_13290 b4b662d5a6d7edc79310062d3f7d015a 103 Gene3D G3DSA:3.40.1440.10 1 98 2.6E-28 T 01-11-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 D3790_12325 2f4b4ea1a844d32c1b4703be217bba8d 482 Pfam PF01523 Putative modulator of DNA gyrase 35 332 3.1E-69 T 01-11-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 D3790_12325 2f4b4ea1a844d32c1b4703be217bba8d 482 Gene3D G3DSA:3.30.2290.10 11 240 1.0E-16 T 01-11-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal D3790_12325 2f4b4ea1a844d32c1b4703be217bba8d 482 PIRSF PIRSF004919 14 481 7.2E-150 T 01-11-2018 IPR025502 TldD D3790_12325 2f4b4ea1a844d32c1b4703be217bba8d 482 SUPERFAMILY SSF111283 18 480 2.49E-132 T 01-11-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 D3790_10915 a0b6bcf75dd656a219d06886925b508a 184 Pfam PF06558 Secretion monitor precursor protein (SecM) 24 177 2.0E-52 T 01-11-2018 IPR009502 Secretion monitor GO:0045182 D3790_10915 a0b6bcf75dd656a219d06886925b508a 184 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 2 176 2.0E-42 T 01-11-2018 IPR009502 Secretion monitor GO:0045182 D3790_10915 a0b6bcf75dd656a219d06886925b508a 184 Hamap MF_01332 Secretion monitor [secM]. 1 180 29.893 T 01-11-2018 IPR009502 Secretion monitor GO:0045182 D3790_02355 3597357ca6b62bbbf83e5a6e5665f66e 128 Gene3D G3DSA:3.90.1010.10 1 128 2.0E-58 T 01-11-2018 D3790_02355 3597357ca6b62bbbf83e5a6e5665f66e 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 126 6.8E-70 T 01-11-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 D3790_02355 3597357ca6b62bbbf83e5a6e5665f66e 128 SUPERFAMILY SSF82649 1 125 1.2E-47 T 01-11-2018 D3790_02355 3597357ca6b62bbbf83e5a6e5665f66e 128 Pfam PF01592 NifU-like N terminal domain 2 126 6.9E-57 T 01-11-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 D3790_09650 1040e94cd9e47a5c288c47206bde1cd2 346 Pfam PF13358 DDE superfamily endonuclease 177 310 4.6E-26 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_09650 1040e94cd9e47a5c288c47206bde1cd2 346 SUPERFAMILY SSF53098 207 311 2.78E-6 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_09650 1040e94cd9e47a5c288c47206bde1cd2 346 Gene3D G3DSA:3.30.420.470 145 340 1.6E-11 T 01-11-2018 D3790_09650 1040e94cd9e47a5c288c47206bde1cd2 346 Pfam PF13551 Winged helix-turn helix 30 79 2.0E-8 T 01-11-2018 D3790_09650 1040e94cd9e47a5c288c47206bde1cd2 346 SUPERFAMILY SSF46689 27 140 4.66E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_10155 0f45174d50b22ceb1112762e1b73da31 1700 Pfam PF12571 Phage tail-collar fibre protein 1 128 6.2E-38 T 01-11-2018 IPR022225 Phage tail fibre protein D3790_10155 0f45174d50b22ceb1112762e1b73da31 1700 Pfam PF03406 Phage tail fibre repeat 164 204 1.9E-16 T 01-11-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 D3790_00925 f3e11ebf901e811df87285c785459e1c 223 Pfam PF03783 Curli production assembly/transport component CsgG 44 220 2.3E-31 T 01-11-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 D3790_00925 f3e11ebf901e811df87285c785459e1c 223 SUPERFAMILY SSF52964 45 144 4.97E-9 T 01-11-2018 D3790_00925 f3e11ebf901e811df87285c785459e1c 223 Gene3D G3DSA:3.40.50.10070 38 164 5.3E-5 T 01-11-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 D3790_02040 e4baa6530dc40d0eaca579d66c1ddfc8 343 Gene3D G3DSA:3.30.420.470 143 326 3.7E-10 T 01-11-2018 D3790_02040 e4baa6530dc40d0eaca579d66c1ddfc8 343 SUPERFAMILY SSF46689 17 137 6.63E-15 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_02040 e4baa6530dc40d0eaca579d66c1ddfc8 343 Pfam PF13358 DDE superfamily endonuclease 177 309 1.1E-22 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_02040 e4baa6530dc40d0eaca579d66c1ddfc8 343 Pfam PF13565 Homeodomain-like domain 57 136 1.6E-12 T 01-11-2018 D3790_05140 a3d22b86bce48fb643d6d0cb56ec40ea 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 305 9.0E-38 T 01-11-2018 IPR020801 Polyketide synthase, acyl transferase domain D3790_05140 a3d22b86bce48fb643d6d0cb56ec40ea 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 1.7E-128 T 01-11-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 D3790_05140 a3d22b86bce48fb643d6d0cb56ec40ea 309 PIRSF PIRSF000446 1 309 4.5E-138 T 01-11-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 D3790_05140 a3d22b86bce48fb643d6d0cb56ec40ea 309 SUPERFAMILY SSF55048 128 197 2.09E-17 T 01-11-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding D3790_05140 a3d22b86bce48fb643d6d0cb56ec40ea 309 SUPERFAMILY SSF52151 4 305 2.59E-81 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase D3790_05140 a3d22b86bce48fb643d6d0cb56ec40ea 309 Gene3D G3DSA:3.30.70.250 125 197 6.8E-107 T 01-11-2018 D3790_05140 a3d22b86bce48fb643d6d0cb56ec40ea 309 Gene3D G3DSA:3.40.366.10 6 286 6.8E-107 T 01-11-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 D3790_05140 a3d22b86bce48fb643d6d0cb56ec40ea 309 Pfam PF00698 Acyl transferase domain 7 291 3.7E-38 T 01-11-2018 IPR014043 Acyl transferase D3790_05290 0f012af883e9ea1c7497704e3cdcebd4 150 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D3790_05290 0f012af883e9ea1c7497704e3cdcebd4 150 Gene3D G3DSA:3.90.79.10 1 150 1.3E-40 T 01-11-2018 D3790_05290 0f012af883e9ea1c7497704e3cdcebd4 150 SUPERFAMILY SSF55811 3 136 1.49E-29 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D3790_05290 0f012af883e9ea1c7497704e3cdcebd4 150 PRINTS PR00502 NUDIX hydrolase family signature 31 45 1.6E-5 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D3790_05290 0f012af883e9ea1c7497704e3cdcebd4 150 PRINTS PR00502 NUDIX hydrolase family signature 45 60 1.6E-5 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D3790_05290 0f012af883e9ea1c7497704e3cdcebd4 150 Pfam PF00293 NUDIX domain 5 114 9.0E-18 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D3790_01465 d0ff46a8ab7a5323c5147b1b5e70ce6b 188 Gene3D G3DSA:2.40.50.140 66 129 2.2E-29 T 01-11-2018 D3790_01465 d0ff46a8ab7a5323c5147b1b5e70ce6b 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.254 T 01-11-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 D3790_01465 d0ff46a8ab7a5323c5147b1b5e70ce6b 188 Gene3D G3DSA:2.30.30.30 1 65 4.0E-27 T 01-11-2018 IPR014722 Ribosomal protein L2, domain 2 D3790_01465 d0ff46a8ab7a5323c5147b1b5e70ce6b 188 SUPERFAMILY SSF50249 69 128 1.07E-16 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_01465 d0ff46a8ab7a5323c5147b1b5e70ce6b 188 SMART SM00841 131 186 9.6E-33 T 01-11-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 D3790_01465 d0ff46a8ab7a5323c5147b1b5e70ce6b 188 SUPERFAMILY SSF50249 130 187 7.88E-19 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_01465 d0ff46a8ab7a5323c5147b1b5e70ce6b 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 01-11-2018 IPR013852 Translation elongation factor P/YeiP, conserved site D3790_01465 d0ff46a8ab7a5323c5147b1b5e70ce6b 188 SMART SM01185 69 123 6.7E-25 T 01-11-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 D3790_01465 d0ff46a8ab7a5323c5147b1b5e70ce6b 188 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 7.9E-77 T 01-11-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 D3790_01465 d0ff46a8ab7a5323c5147b1b5e70ce6b 188 SUPERFAMILY SSF50104 2 63 2.01E-20 T 01-11-2018 IPR008991 Translation protein SH3-like domain superfamily D3790_01465 d0ff46a8ab7a5323c5147b1b5e70ce6b 188 Gene3D G3DSA:2.40.50.140 130 188 3.4E-28 T 01-11-2018 D3790_01465 d0ff46a8ab7a5323c5147b1b5e70ce6b 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 9.4E-24 T 01-11-2018 IPR013185 Translation elongation factor, KOW-like D3790_01465 d0ff46a8ab7a5323c5147b1b5e70ce6b 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 3.3E-26 T 01-11-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 D3790_01465 d0ff46a8ab7a5323c5147b1b5e70ce6b 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 1.8E-21 T 01-11-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 D3790_01465 d0ff46a8ab7a5323c5147b1b5e70ce6b 188 PIRSF PIRSF005901 2 188 1.0E-66 T 01-11-2018 IPR020599 Translation elongation factor P/YeiP D3790_14230 592fa62d1acc6061650cc67827a77794 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 9.1E-51 T 01-11-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14230 592fa62d1acc6061650cc67827a77794 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 01-11-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14230 592fa62d1acc6061650cc67827a77794 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.9 T 01-11-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14230 592fa62d1acc6061650cc67827a77794 110 Gene3D G3DSA:3.90.470.10 1 110 5.8E-47 T 01-11-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 D3790_14230 592fa62d1acc6061650cc67827a77794 110 SUPERFAMILY SSF54843 1 109 4.97E-43 T 01-11-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 D3790_14230 592fa62d1acc6061650cc67827a77794 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 3.6E-38 T 01-11-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 D3790_01125 088acc551e57203c12059a746b4a98fd 199 Pfam PF02325 YGGT family 121 183 1.3E-18 T 01-11-2018 IPR003425 CCB3/YggT GO:0016020 D3790_01125 088acc551e57203c12059a746b4a98fd 199 Pfam PF02325 YGGT family 10 77 9.3E-20 T 01-11-2018 IPR003425 CCB3/YggT GO:0016020 D3790_03805 0a88f6be2180178e8d88a21810d9dd9b 256 Gene3D G3DSA:3.40.190.10 106 217 4.1E-84 T 01-11-2018 D3790_03805 0a88f6be2180178e8d88a21810d9dd9b 256 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 33 252 6.9E-75 T 01-11-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 D3790_03805 0a88f6be2180178e8d88a21810d9dd9b 256 PIRSF PIRSF004846 2 256 6.8E-74 T 01-11-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 D3790_03805 0a88f6be2180178e8d88a21810d9dd9b 256 SUPERFAMILY SSF53850 26 255 1.8E-67 T 01-11-2018 D3790_03805 0a88f6be2180178e8d88a21810d9dd9b 256 Pfam PF13531 Bacterial extracellular solute-binding protein 28 253 1.8E-46 T 01-11-2018 D3790_03805 0a88f6be2180178e8d88a21810d9dd9b 256 Gene3D G3DSA:3.40.190.10 29 253 4.1E-84 T 01-11-2018 D3790_09380 86172d3923c820ce1fc9d2ff078a217f 243 Pfam PF00975 Thioesterase domain 16 237 7.8E-43 T 01-11-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 D3790_09380 86172d3923c820ce1fc9d2ff078a217f 243 SUPERFAMILY SSF53474 8 231 1.43E-36 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_09380 86172d3923c820ce1fc9d2ff078a217f 243 Gene3D G3DSA:3.40.50.1820 2 238 2.0E-49 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_19030 86157fe1c30e6e87aaddb9c2a2af82eb 174 Pfam PF12724 Flavodoxin domain 4 152 1.5E-54 T 01-11-2018 IPR026816 Flavodoxin domain D3790_19030 86157fe1c30e6e87aaddb9c2a2af82eb 174 SUPERFAMILY SSF52218 1 157 1.2E-29 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_19030 86157fe1c30e6e87aaddb9c2a2af82eb 174 Gene3D G3DSA:3.40.50.360 4 115 2.9E-14 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_19255 d42dfa701ec76f533f9b6006d5404f37 265 Gene3D G3DSA:2.40.50.100 135 169 1.2E-12 T 01-11-2018 D3790_19255 d42dfa701ec76f533f9b6006d5404f37 265 ProSitePatterns PS00543 HlyD family secretion proteins signature. 239 261 - T 01-11-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 D3790_19255 d42dfa701ec76f533f9b6006d5404f37 265 Pfam PF13437 HlyD family secretion protein 135 241 8.0E-12 T 01-11-2018 D3790_19255 d42dfa701ec76f533f9b6006d5404f37 265 Gene3D G3DSA:2.40.30.170 171 252 1.2E-12 T 01-11-2018 D3790_19255 d42dfa701ec76f533f9b6006d5404f37 265 Gene3D G3DSA:1.10.287.470 31 134 1.2E-12 T 01-11-2018 D3790_02550 495055564af9381ed319705ba9d54370 154 SUPERFAMILY SSF51735 4 38 2.44E-10 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_02550 495055564af9381ed319705ba9d54370 154 Gene3D G3DSA:3.40.50.720 1 43 4.4E-10 T 01-11-2018 D3790_02550 495055564af9381ed319705ba9d54370 154 Gene3D G3DSA:3.40.50.720 44 123 7.0E-23 T 01-11-2018 D3790_02550 495055564af9381ed319705ba9d54370 154 SUPERFAMILY SSF51735 40 118 6.18E-23 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_02550 495055564af9381ed319705ba9d54370 154 Pfam PF00106 short chain dehydrogenase 5 39 2.6E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_02550 495055564af9381ed319705ba9d54370 154 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 41 118 1.8E-19 T 01-11-2018 D3790_04705 00e532ee786000bb37b9a2016256cbfb 91 SMART SM00530 17 67 0.0084 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_04705 00e532ee786000bb37b9a2016256cbfb 91 Gene3D G3DSA:1.10.260.40 5 78 1.4E-8 T 01-11-2018 D3790_04705 00e532ee786000bb37b9a2016256cbfb 91 Pfam PF01381 Helix-turn-helix 18 64 1.8E-7 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_04705 00e532ee786000bb37b9a2016256cbfb 91 SUPERFAMILY SSF47413 8 65 9.07E-8 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_09700 762fe68acf54304565ce8d9dc036c453 369 PRINTS PR01022 Outer membrane protein A signature 334 347 4.1E-32 T 01-11-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 D3790_09700 762fe68acf54304565ce8d9dc036c453 369 PRINTS PR01022 Outer membrane protein A signature 194 208 4.1E-32 T 01-11-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 D3790_09700 762fe68acf54304565ce8d9dc036c453 369 PRINTS PR01022 Outer membrane protein A signature 300 319 4.1E-32 T 01-11-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 D3790_09700 762fe68acf54304565ce8d9dc036c453 369 PRINTS PR01022 Outer membrane protein A signature 112 128 4.1E-32 T 01-11-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 D3790_09700 762fe68acf54304565ce8d9dc036c453 369 Pfam PF00691 OmpA family 243 333 3.8E-21 T 01-11-2018 IPR006665 OmpA-like domain D3790_09700 762fe68acf54304565ce8d9dc036c453 369 SUPERFAMILY SSF103088 230 355 1.44E-31 T 01-11-2018 IPR036737 OmpA-like domain superfamily D3790_09700 762fe68acf54304565ce8d9dc036c453 369 Pfam PF01389 OmpA-like transmembrane domain 21 210 1.0E-69 T 01-11-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 D3790_09700 762fe68acf54304565ce8d9dc036c453 369 PRINTS PR01021 OMPA domain signature 276 291 1.8E-21 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D3790_09700 762fe68acf54304565ce8d9dc036c453 369 PRINTS PR01021 OMPA domain signature 291 307 1.8E-21 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D3790_09700 762fe68acf54304565ce8d9dc036c453 369 PRINTS PR01021 OMPA domain signature 244 266 1.8E-21 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D3790_09700 762fe68acf54304565ce8d9dc036c453 369 Gene3D G3DSA:3.30.1330.60 230 359 1.9E-39 T 01-11-2018 IPR036737 OmpA-like domain superfamily D3790_09700 762fe68acf54304565ce8d9dc036c453 369 SUPERFAMILY SSF56925 20 210 4.71E-40 T 01-11-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D3790_09700 762fe68acf54304565ce8d9dc036c453 369 Gene3D G3DSA:2.40.160.20 8 229 2.5E-84 T 01-11-2018 D3790_15630 17956016fe005709f97896d7eb205bcd 184 Pfam PF01292 Prokaryotic cytochrome b561 10 180 2.7E-21 T 01-11-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 D3790_15630 17956016fe005709f97896d7eb205bcd 184 SUPERFAMILY SSF81342 5 183 8.63E-30 T 01-11-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 D3790_01920 65922a194137f2843fbadd6914dac8e7 164 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 6.5E-35 T 01-11-2018 IPR005134 Uncharacterised protein family UPF0114 D3790_01920 65922a194137f2843fbadd6914dac8e7 164 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 164 89.771 T 01-11-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria D3790_01920 65922a194137f2843fbadd6914dac8e7 164 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 163 1.8E-75 T 01-11-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria D3790_18930 35672ac6c91a6a8b1e656b3b9cbdec0d 130 Gene3D G3DSA:1.10.10.690 1 129 7.7E-45 T 01-11-2018 IPR027405 YidB-like D3790_18930 35672ac6c91a6a8b1e656b3b9cbdec0d 130 SUPERFAMILY SSF140804 4 119 3.27E-35 T 01-11-2018 IPR027405 YidB-like D3790_18930 35672ac6c91a6a8b1e656b3b9cbdec0d 130 Pfam PF06078 Bacterial protein of unknown function (DUF937) 17 106 2.2E-12 T 01-11-2018 IPR009282 Protein of unknown function DUF937 D3790_05025 54824a908354dd920e82f41f584b9b2f 361 SUPERFAMILY SSF81345 23 356 2.09E-78 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_05025 54824a908354dd920e82f41f584b9b2f 361 Pfam PF01032 FecCD transport family 45 356 9.2E-84 T 01-11-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 D3790_05025 54824a908354dd920e82f41f584b9b2f 361 Gene3D G3DSA:1.10.3470.10 28 360 1.7E-96 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_01065 7e0e4caacb24110d8d5c21abb018e617 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 7.8E-17 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_01065 7e0e4caacb24110d8d5c21abb018e617 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.4E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_01065 7e0e4caacb24110d8d5c21abb018e617 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.4E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_01065 7e0e4caacb24110d8d5c21abb018e617 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.4E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D3790_01065 7e0e4caacb24110d8d5c21abb018e617 309 SUPERFAMILY SSF53850 94 297 1.15E-36 T 01-11-2018 D3790_01065 7e0e4caacb24110d8d5c21abb018e617 309 Gene3D G3DSA:1.10.10.10 4 94 6.6E-17 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_01065 7e0e4caacb24110d8d5c21abb018e617 309 Pfam PF03466 LysR substrate binding domain 92 295 1.6E-34 T 01-11-2018 IPR005119 LysR, substrate-binding D3790_01065 7e0e4caacb24110d8d5c21abb018e617 309 Gene3D G3DSA:3.40.190.290 95 302 4.4E-34 T 01-11-2018 D3790_01065 7e0e4caacb24110d8d5c21abb018e617 309 SUPERFAMILY SSF46785 3 85 1.02E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_18830 f840c35a58ea776281a77004b6fddd29 581 Gene3D G3DSA:3.40.47.10 92 553 3.6E-72 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_18830 f840c35a58ea776281a77004b6fddd29 581 SUPERFAMILY SSF53901 291 494 3.55E-26 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_18830 f840c35a58ea776281a77004b6fddd29 581 SUPERFAMILY SSF53901 118 327 6.24E-21 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_18830 f840c35a58ea776281a77004b6fddd29 581 SMART SM00825 Beta-ketoacyl synthase 83 497 0.0026 T 01-11-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain D3790_18830 f840c35a58ea776281a77004b6fddd29 581 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 191 316 3.0E-6 T 01-11-2018 IPR014030 Beta-ketoacyl synthase, N-terminal D3790_18830 f840c35a58ea776281a77004b6fddd29 581 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 331 442 7.6E-9 T 01-11-2018 IPR014031 Beta-ketoacyl synthase, C-terminal D3790_13895 c8334dd3035b95ba6893dfb353ac1b99 241 Pfam PF00583 Acetyltransferase (GNAT) family 145 228 6.2E-13 T 01-11-2018 IPR000182 GNAT domain D3790_13895 c8334dd3035b95ba6893dfb353ac1b99 241 SUPERFAMILY SSF55729 45 236 1.13E-24 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_13895 c8334dd3035b95ba6893dfb353ac1b99 241 Gene3D G3DSA:3.40.630.30 1 240 3.9E-70 T 01-11-2018 D3790_13895 c8334dd3035b95ba6893dfb353ac1b99 241 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 44 240 4.1E-85 T 01-11-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 MetaCyc: PWY-7315 D3790_13895 c8334dd3035b95ba6893dfb353ac1b99 241 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 44 240 45.423 T 01-11-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 MetaCyc: PWY-7315 D3790_03030 787d98427fbffd9cee62d9419a588adf 110 SUPERFAMILY SSF69754 3 103 7.72E-33 T 01-11-2018 IPR036567 Ribosome hibernation promotion factor-like D3790_03030 787d98427fbffd9cee62d9419a588adf 110 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 1.2E-33 T 01-11-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 D3790_03030 787d98427fbffd9cee62d9419a588adf 110 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 8.5E-23 T 01-11-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 D3790_03030 787d98427fbffd9cee62d9419a588adf 110 Gene3D G3DSA:3.30.160.100 1 107 5.6E-37 T 01-11-2018 IPR036567 Ribosome hibernation promotion factor-like D3790_16830 08db867d30d06ae77001c47f49e331e5 265 Gene3D G3DSA:3.40.190.80 149 263 2.6E-25 T 01-11-2018 D3790_16830 08db867d30d06ae77001c47f49e331e5 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 2.4E-20 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D3790_16830 08db867d30d06ae77001c47f49e331e5 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 2.4E-20 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D3790_16830 08db867d30d06ae77001c47f49e331e5 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 138 161 2.4E-20 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D3790_16830 08db867d30d06ae77001c47f49e331e5 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 2.4E-20 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D3790_16830 08db867d30d06ae77001c47f49e331e5 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 2.4E-20 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D3790_16830 08db867d30d06ae77001c47f49e331e5 265 Pfam PF00459 Inositol monophosphatase family 16 261 6.7E-49 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D3790_16830 08db867d30d06ae77001c47f49e331e5 265 SUPERFAMILY SSF56655 7 263 2.62E-73 T 01-11-2018 D3790_16830 08db867d30d06ae77001c47f49e331e5 265 Gene3D G3DSA:3.30.540.10 5 140 3.0E-40 T 01-11-2018 D3790_16830 08db867d30d06ae77001c47f49e331e5 265 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 83 96 - T 01-11-2018 IPR020583 Inositol monophosphatase, metal-binding site D3790_09735 3c6e551789565f119ce203e9639c4ecd 422 Pfam PF04403 Paraquat-inducible protein A 254 409 5.2E-55 T 01-11-2018 IPR007498 Intermembrane transport protein PqiA-like D3790_09735 3c6e551789565f119ce203e9639c4ecd 422 Pfam PF04403 Paraquat-inducible protein A 52 201 2.0E-38 T 01-11-2018 IPR007498 Intermembrane transport protein PqiA-like D3790_09735 3c6e551789565f119ce203e9639c4ecd 422 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 4 408 4.2E-156 T 01-11-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type D3790_07180 3a7ffdab49ca23b4730c23a462511ed8 870 Pfam PF11739 Dicarboxylate transport 657 858 1.5E-58 T 01-11-2018 IPR021730 Dicarboxylate transport D3790_16230 dfbe68c9dee996a6a0ccfec2500f4a57 245 Gene3D G3DSA:1.10.3720.10 9 241 2.6E-50 T 01-11-2018 IPR035906 MetI-like superfamily D3790_16230 dfbe68c9dee996a6a0ccfec2500f4a57 245 SUPERFAMILY SSF161098 18 226 1.7E-42 T 01-11-2018 IPR035906 MetI-like superfamily D3790_16230 dfbe68c9dee996a6a0ccfec2500f4a57 245 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 84 1.6E-19 T 01-11-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 D3790_16230 dfbe68c9dee996a6a0ccfec2500f4a57 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 239 6.4E-18 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_19350 16c1bfcfe966418e786da09e62809d0f 190 SUPERFAMILY SSF49401 47 190 9.44E-32 T 01-11-2018 IPR008966 Adhesion domain superfamily D3790_19350 16c1bfcfe966418e786da09e62809d0f 190 Gene3D G3DSA:2.60.40.1090 39 189 7.5E-30 T 01-11-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 D3790_19350 16c1bfcfe966418e786da09e62809d0f 190 Pfam PF00419 Fimbrial protein 44 189 2.5E-18 T 01-11-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 D3790_12685 aa5922ba9aa2a87e9e27845ac269f961 242 SUPERFAMILY SSF52540 10 230 6.23E-38 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_12685 aa5922ba9aa2a87e9e27845ac269f961 242 Gene3D G3DSA:3.40.50.300 2 240 1.1E-41 T 01-11-2018 D3790_12685 aa5922ba9aa2a87e9e27845ac269f961 242 Pfam PF00005 ABC transporter 29 177 6.5E-17 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_16370 4478a273981d504a5350b64a452ee111 302 Gene3D G3DSA:3.40.190.10 92 302 1.2E-67 T 01-11-2018 D3790_16370 4478a273981d504a5350b64a452ee111 302 Gene3D G3DSA:3.40.190.10 168 259 1.2E-67 T 01-11-2018 D3790_16370 4478a273981d504a5350b64a452ee111 302 SUPERFAMILY SSF53850 75 302 1.94E-83 T 01-11-2018 D3790_16370 4478a273981d504a5350b64a452ee111 302 Pfam PF14502 Helix-turn-helix domain 26 72 1.5E-21 T 01-11-2018 D3790_16370 4478a273981d504a5350b64a452ee111 302 Pfam PF14503 YhfZ C-terminal domain 76 302 4.4E-85 T 01-11-2018 IPR032791 Uncharacterised protein YhfZ, C-terminal domain D3790_05575 fa050a05b54d7ac0a8c2bfdd3d135269 185 Pfam PF03358 NADPH-dependent FMN reductase 1 137 1.7E-30 T 01-11-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 D3790_05575 fa050a05b54d7ac0a8c2bfdd3d135269 185 SUPERFAMILY SSF52218 1 141 2.79E-32 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_05575 fa050a05b54d7ac0a8c2bfdd3d135269 185 Gene3D G3DSA:3.40.50.360 1 173 8.9E-44 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_13815 35b2c3459b6bedb74aefeef8112ad390 106 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 01-11-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D3790_13815 35b2c3459b6bedb74aefeef8112ad390 106 SMART SM01219 1 106 1.5E-55 T 01-11-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D3790_13815 35b2c3459b6bedb74aefeef8112ad390 106 Gene3D G3DSA:3.30.920.10 1 106 1.6E-41 T 01-11-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D3790_13815 35b2c3459b6bedb74aefeef8112ad390 106 Pfam PF01491 Frataxin-like domain 1 101 3.2E-31 T 01-11-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D3790_13815 35b2c3459b6bedb74aefeef8112ad390 106 SUPERFAMILY SSF55387 1 105 4.71E-40 T 01-11-2018 D3790_13815 35b2c3459b6bedb74aefeef8112ad390 106 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 105 28.923 T 01-11-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D3790_13815 35b2c3459b6bedb74aefeef8112ad390 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 4.2E-44 T 01-11-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D3790_17345 5dfb8a0461f7a91239d1ee4e685365bb 426 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 1.5E-38 T 01-11-2018 D3790_17345 5dfb8a0461f7a91239d1ee4e685365bb 426 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 1.5E-38 T 01-11-2018 D3790_17345 5dfb8a0461f7a91239d1ee4e685365bb 426 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 1.5E-38 T 01-11-2018 D3790_17345 5dfb8a0461f7a91239d1ee4e685365bb 426 PRINTS PR00173 Glutamate-aspartate symporter signature 50 70 1.5E-38 T 01-11-2018 D3790_17345 5dfb8a0461f7a91239d1ee4e685365bb 426 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 1.5E-38 T 01-11-2018 D3790_17345 5dfb8a0461f7a91239d1ee4e685365bb 426 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 1.5E-38 T 01-11-2018 D3790_17345 5dfb8a0461f7a91239d1ee4e685365bb 426 PRINTS PR00173 Glutamate-aspartate symporter signature 80 105 1.5E-38 T 01-11-2018 D3790_17345 5dfb8a0461f7a91239d1ee4e685365bb 426 PRINTS PR00173 Glutamate-aspartate symporter signature 198 217 1.5E-38 T 01-11-2018 D3790_17345 5dfb8a0461f7a91239d1ee4e685365bb 426 Gene3D G3DSA:1.10.3860.10 1 423 2.9E-120 T 01-11-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 D3790_17345 5dfb8a0461f7a91239d1ee4e685365bb 426 Pfam PF00375 Sodium:dicarboxylate symporter family 6 405 7.7E-108 T 01-11-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 D3790_17345 5dfb8a0461f7a91239d1ee4e685365bb 426 SUPERFAMILY SSF118215 6 407 4.97E-112 T 01-11-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 D3790_04125 909d5402dadf25c5646518987e75a7e1 195 Gene3D G3DSA:3.90.1720.10 64 193 1.3E-44 T 01-11-2018 D3790_04125 909d5402dadf25c5646518987e75a7e1 195 SUPERFAMILY SSF54001 69 187 9.81E-42 T 01-11-2018 IPR038765 Papain-like cysteine peptidase superfamily D3790_04125 909d5402dadf25c5646518987e75a7e1 195 Pfam PF00877 NlpC/P60 family 81 185 5.1E-32 T 01-11-2018 IPR000064 Endopeptidase, NLPC/P60 domain D3790_06230 a62bd2dd81236f755133f97436777204 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 2.3E-38 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_06230 a62bd2dd81236f755133f97436777204 306 SUPERFAMILY SSF161098 88 290 4.84E-21 T 01-11-2018 IPR035906 MetI-like superfamily D3790_06230 a62bd2dd81236f755133f97436777204 306 Gene3D G3DSA:1.10.3720.10 84 301 9.7E-21 T 01-11-2018 IPR035906 MetI-like superfamily D3790_13345 32b5be81344ba45e108a3bc528b5a595 136 Pfam PF02033 Ribosome-binding factor A 7 115 4.0E-32 T 01-11-2018 IPR000238 Ribosome-binding factor A GO:0006364 D3790_13345 32b5be81344ba45e108a3bc528b5a595 136 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 103 6.0E-46 T 01-11-2018 IPR000238 Ribosome-binding factor A GO:0006364 D3790_13345 32b5be81344ba45e108a3bc528b5a595 136 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 116 26.719 T 01-11-2018 IPR000238 Ribosome-binding factor A GO:0006364 D3790_13345 32b5be81344ba45e108a3bc528b5a595 136 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 121 4.7E-42 T 01-11-2018 IPR000238 Ribosome-binding factor A GO:0006364 D3790_13345 32b5be81344ba45e108a3bc528b5a595 136 SUPERFAMILY SSF89919 2 110 1.7E-33 T 01-11-2018 IPR023799 Ribosome-binding factor A domain superfamily D3790_13345 32b5be81344ba45e108a3bc528b5a595 136 ProSitePatterns PS01319 Ribosome-binding factor A signature. 82 103 - T 01-11-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 D3790_13345 32b5be81344ba45e108a3bc528b5a595 136 Gene3D G3DSA:3.30.300.20 1 111 3.2E-40 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta D3790_10930 df929f3cb32465d317cf8ee1791537d8 387 SUPERFAMILY SSF55307 203 319 1.08E-42 T 01-11-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 D3790_10930 df929f3cb32465d317cf8ee1791537d8 387 SUPERFAMILY SSF52490 12 207 2.22E-70 T 01-11-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 D3790_10930 df929f3cb32465d317cf8ee1791537d8 387 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 330 8.3E-142 T 01-11-2018 IPR000158 Cell division protein FtsZ GO:0005525 D3790_10930 df929f3cb32465d317cf8ee1791537d8 387 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 1.7E-42 T 01-11-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 D3790_10930 df929f3cb32465d317cf8ee1791537d8 387 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 01-11-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 D3790_10930 df929f3cb32465d317cf8ee1791537d8 387 SMART SM00864 12 204 1.7E-112 T 01-11-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 D3790_10930 df929f3cb32465d317cf8ee1791537d8 387 Gene3D G3DSA:3.30.1330.20 220 328 2.4E-34 T 01-11-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 D3790_10930 df929f3cb32465d317cf8ee1791537d8 387 Gene3D G3DSA:3.40.50.1440 6 219 1.7E-81 T 01-11-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 D3790_10930 df929f3cb32465d317cf8ee1791537d8 387 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 01-11-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 D3790_10930 df929f3cb32465d317cf8ee1791537d8 387 SMART SM00865 206 324 8.6E-56 T 01-11-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 D3790_10930 df929f3cb32465d317cf8ee1791537d8 387 Pfam PF12327 FtsZ family, C-terminal domain 221 315 2.2E-37 T 01-11-2018 IPR024757 Cell division protein FtsZ, C-terminal D3790_10930 df929f3cb32465d317cf8ee1791537d8 387 PRINTS PR00423 Cell division protein FtsZ signature 188 210 7.0E-52 T 01-11-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 D3790_10930 df929f3cb32465d317cf8ee1791537d8 387 PRINTS PR00423 Cell division protein FtsZ signature 97 117 7.0E-52 T 01-11-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 D3790_10930 df929f3cb32465d317cf8ee1791537d8 387 PRINTS PR00423 Cell division protein FtsZ signature 125 146 7.0E-52 T 01-11-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 D3790_10930 df929f3cb32465d317cf8ee1791537d8 387 PRINTS PR00423 Cell division protein FtsZ signature 211 232 7.0E-52 T 01-11-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 D3790_10930 df929f3cb32465d317cf8ee1791537d8 387 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 356 38.265 T 01-11-2018 IPR000158 Cell division protein FtsZ GO:0005525 D3790_08400 bb3338a9196132e11b124954c05f13fc 291 Pfam PF00950 ABC 3 transport family 10 265 1.3E-88 T 01-11-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 D3790_08400 bb3338a9196132e11b124954c05f13fc 291 Gene3D G3DSA:1.10.3470.10 41 271 4.9E-9 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_08400 bb3338a9196132e11b124954c05f13fc 291 SUPERFAMILY SSF81345 5 261 2.48E-39 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_03925 26d76e8fd1b0f17b681a8eba61e0a251 336 Gene3D G3DSA:1.10.287.470 179 206 1.7E-23 T 01-11-2018 D3790_03925 26d76e8fd1b0f17b681a8eba61e0a251 336 SUPERFAMILY SSF111369 41 122 1.7E-7 T 01-11-2018 D3790_03925 26d76e8fd1b0f17b681a8eba61e0a251 336 Gene3D G3DSA:2.40.50.100 207 241 1.7E-23 T 01-11-2018 D3790_03925 26d76e8fd1b0f17b681a8eba61e0a251 336 Gene3D G3DSA:2.40.30.170 33 43 1.7E-10 T 01-11-2018 D3790_03925 26d76e8fd1b0f17b681a8eba61e0a251 336 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 32 286 5.5E-15 T 01-11-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D3790_03925 26d76e8fd1b0f17b681a8eba61e0a251 336 Gene3D G3DSA:1.10.287.470 78 109 1.7E-10 T 01-11-2018 D3790_03925 26d76e8fd1b0f17b681a8eba61e0a251 336 Gene3D G3DSA:2.40.30.170 242 321 1.7E-23 T 01-11-2018 D3790_03925 26d76e8fd1b0f17b681a8eba61e0a251 336 Gene3D G3DSA:1.10.287.470 111 172 1.1E-7 T 01-11-2018 D3790_03925 26d76e8fd1b0f17b681a8eba61e0a251 336 Gene3D G3DSA:2.40.50.100 44 77 1.7E-10 T 01-11-2018 D3790_03925 26d76e8fd1b0f17b681a8eba61e0a251 336 SUPERFAMILY SSF111369 113 291 3.14E-11 T 01-11-2018 D3790_04155 0f351dbb4e98bc10bc5f04fdd202d2b7 308 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 297 1.2E-107 T 01-11-2018 IPR010099 Epimerase family protein SDR39U1 D3790_04155 0f351dbb4e98bc10bc5f04fdd202d2b7 308 Pfam PF08338 Domain of unknown function (DUF1731) 254 300 8.3E-19 T 01-11-2018 IPR013549 Domain of unknown function DUF1731 D3790_04155 0f351dbb4e98bc10bc5f04fdd202d2b7 308 SUPERFAMILY SSF51735 1 302 3.91E-38 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_04155 0f351dbb4e98bc10bc5f04fdd202d2b7 308 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 220 2.2E-14 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 D3790_04155 0f351dbb4e98bc10bc5f04fdd202d2b7 308 Gene3D G3DSA:3.40.50.720 1 291 1.7E-71 T 01-11-2018 D3790_18715 e9dfee1001ed4120d0053930c84b2b72 175 Pfam PF04345 Chorismate lyase 13 167 6.7E-36 T 01-11-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 D3790_18715 e9dfee1001ed4120d0053930c84b2b72 175 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 166 25.717 T 01-11-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 D3790_18715 e9dfee1001ed4120d0053930c84b2b72 175 Gene3D G3DSA:3.40.1410.10 4 166 2.4E-49 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily D3790_18715 e9dfee1001ed4120d0053930c84b2b72 175 SUPERFAMILY SSF64288 7 166 7.86E-49 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily D3790_08350 b2c263d4aa62eb30b4738da15d672d86 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 2.7E-17 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_08350 b2c263d4aa62eb30b4738da15d672d86 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 2.7E-17 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_08350 b2c263d4aa62eb30b4738da15d672d86 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 2.7E-17 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_08350 b2c263d4aa62eb30b4738da15d672d86 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 5.4E-30 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_08350 b2c263d4aa62eb30b4738da15d672d86 98 SMART SM00411 3 92 1.0E-40 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D3790_08350 b2c263d4aa62eb30b4738da15d672d86 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.692 T 01-11-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 D3790_08350 b2c263d4aa62eb30b4738da15d672d86 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 96 7.3E-52 T 01-11-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 D3790_08350 b2c263d4aa62eb30b4738da15d672d86 98 SUPERFAMILY SSF47729 3 92 1.32E-30 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D3790_08350 b2c263d4aa62eb30b4738da15d672d86 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 01-11-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 D3790_08350 b2c263d4aa62eb30b4738da15d672d86 98 Gene3D G3DSA:4.10.520.10 1 98 3.3E-37 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D3790_03130 540ab15a61524c9c8048fe9a2c51cb5c 253 Pfam PF06276 Ferric iron reductase FhuF-like transporter 83 222 8.2E-25 T 01-11-2018 IPR022770 Ferric iron reductase FhuF domain D3790_03130 540ab15a61524c9c8048fe9a2c51cb5c 253 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 77 250 3.4E-61 T 01-11-2018 IPR008090 Ferric iron reductase D3790_03130 540ab15a61524c9c8048fe9a2c51cb5c 253 PRINTS PR01714 Ferric iron reductase signature 185 200 1.2E-38 T 01-11-2018 IPR008090 Ferric iron reductase D3790_03130 540ab15a61524c9c8048fe9a2c51cb5c 253 PRINTS PR01714 Ferric iron reductase signature 83 98 1.2E-38 T 01-11-2018 IPR008090 Ferric iron reductase D3790_03130 540ab15a61524c9c8048fe9a2c51cb5c 253 PRINTS PR01714 Ferric iron reductase signature 229 247 1.2E-38 T 01-11-2018 IPR008090 Ferric iron reductase D3790_03130 540ab15a61524c9c8048fe9a2c51cb5c 253 PRINTS PR01714 Ferric iron reductase signature 47 64 1.2E-38 T 01-11-2018 IPR008090 Ferric iron reductase D3790_03130 540ab15a61524c9c8048fe9a2c51cb5c 253 PRINTS PR01714 Ferric iron reductase signature 203 219 1.2E-38 T 01-11-2018 IPR008090 Ferric iron reductase D3790_03130 540ab15a61524c9c8048fe9a2c51cb5c 253 PRINTS PR01714 Ferric iron reductase signature 161 177 1.2E-38 T 01-11-2018 IPR008090 Ferric iron reductase D3790_03130 540ab15a61524c9c8048fe9a2c51cb5c 253 PRINTS PR01714 Ferric iron reductase signature 115 129 1.2E-38 T 01-11-2018 IPR008090 Ferric iron reductase D3790_03130 540ab15a61524c9c8048fe9a2c51cb5c 253 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 229 249 1.5E-4 T 01-11-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 D3790_16865 2c8262fdf79e2d051373972619450a0a 67 Pfam PF09526 Probable metal-binding protein (DUF2387) 5 60 1.8E-21 T 01-11-2018 IPR012658 Conserved hypothetical protein CHP02443 D3790_16865 2c8262fdf79e2d051373972619450a0a 67 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 4 61 1.7E-31 T 01-11-2018 IPR012658 Conserved hypothetical protein CHP02443 D3790_09875 ac8292fa1cbf8534890e24b5c1e0d195 228 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 33.608 T 01-11-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 D3790_09875 ac8292fa1cbf8534890e24b5c1e0d195 228 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 9.4E-90 T 01-11-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 D3790_09875 ac8292fa1cbf8534890e24b5c1e0d195 228 SUPERFAMILY SSF52540 6 223 3.14E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09875 ac8292fa1cbf8534890e24b5c1e0d195 228 Pfam PF02224 Cytidylate kinase 8 221 9.2E-80 T 01-11-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 D3790_09875 ac8292fa1cbf8534890e24b5c1e0d195 228 Gene3D G3DSA:3.40.50.300 1 228 3.9E-83 T 01-11-2018 D3790_13400 9ce17d2e29201ba2d8dc90ff0b798259 97 SUPERFAMILY SSF75471 1 94 3.53E-31 T 01-11-2018 IPR035920 YhbY-like superfamily D3790_13400 9ce17d2e29201ba2d8dc90ff0b798259 97 SMART SM01103 3 86 6.5E-41 T 01-11-2018 IPR001890 RNA-binding, CRM domain GO:0003723 D3790_13400 9ce17d2e29201ba2d8dc90ff0b798259 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 96 7.0E-38 T 01-11-2018 IPR001890 RNA-binding, CRM domain GO:0003723 D3790_13400 9ce17d2e29201ba2d8dc90ff0b798259 97 Gene3D G3DSA:3.30.110.60 1 97 2.6E-37 T 01-11-2018 IPR035920 YhbY-like superfamily D3790_13400 9ce17d2e29201ba2d8dc90ff0b798259 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 5.4E-23 T 01-11-2018 IPR001890 RNA-binding, CRM domain GO:0003723 D3790_13400 9ce17d2e29201ba2d8dc90ff0b798259 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 96 2.2E-36 T 01-11-2018 IPR017924 RNA-binding protein YhbY GO:0003723 D3790_06355 7c417b363a21dc0cb3c69480750a87d0 239 SUPERFAMILY SSF74653 155 227 2.09E-20 T 01-11-2018 D3790_06355 7c417b363a21dc0cb3c69480750a87d0 239 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 162 231 1.6E-17 T 01-11-2018 IPR037682 TonB, C-terminal GO:0055085 D3790_06355 7c417b363a21dc0cb3c69480750a87d0 239 PRINTS PR01374 Gram-negative bacterial tonB protein signature 178 196 1.7E-26 T 01-11-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D3790_06355 7c417b363a21dc0cb3c69480750a87d0 239 PRINTS PR01374 Gram-negative bacterial tonB protein signature 197 214 1.7E-26 T 01-11-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D3790_06355 7c417b363a21dc0cb3c69480750a87d0 239 PRINTS PR01374 Gram-negative bacterial tonB protein signature 84 94 1.7E-26 T 01-11-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D3790_06355 7c417b363a21dc0cb3c69480750a87d0 239 PRINTS PR01374 Gram-negative bacterial tonB protein signature 157 178 1.7E-26 T 01-11-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D3790_06355 7c417b363a21dc0cb3c69480750a87d0 239 Gene3D G3DSA:3.30.2420.10 152 238 4.4E-28 T 01-11-2018 D3790_06355 7c417b363a21dc0cb3c69480750a87d0 239 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 163 233 8.1E-17 T 01-11-2018 IPR006260 TonB/TolA, C-terminal D3790_10350 3ebb7a2e0f6f15b1df1daecb48aa0094 202 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 141 1.2E-52 T 01-11-2018 IPR006521 Tail protein I D3790_10350 3ebb7a2e0f6f15b1df1daecb48aa0094 202 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 6 142 6.0E-59 T 01-11-2018 IPR006521 Tail protein I D3790_07770 dfa0043dc450405f989210833ee25577 314 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 15 309 44.27 T 01-11-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 D3790_07770 dfa0043dc450405f989210833ee25577 314 SUPERFAMILY SSF110581 8 307 1.57E-118 T 01-11-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 D3790_07770 dfa0043dc450405f989210833ee25577 314 Gene3D G3DSA:3.40.1790.10 7 312 1.8E-139 T 01-11-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 D3790_07770 dfa0043dc450405f989210833ee25577 314 Pfam PF04227 Indigoidine synthase A like protein 16 305 4.6E-134 T 01-11-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 D3790_18330 798d2db45d745d920bde4c89054e5cfc 563 Gene3D G3DSA:3.40.462.10 239 512 1.5E-116 T 01-11-2018 IPR016170 Cytokinin dehydrogenase, C-terminal domain superfamily KEGG: 00908+1.5.99.12 D3790_18330 798d2db45d745d920bde4c89054e5cfc 563 Gene3D G3DSA:3.30.465.10 111 238 2.7E-45 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 D3790_18330 798d2db45d745d920bde4c89054e5cfc 563 SUPERFAMILY SSF56176 35 235 7.94E-26 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 D3790_18330 798d2db45d745d920bde4c89054e5cfc 563 Pfam PF01565 FAD binding domain 56 170 5.1E-11 T 01-11-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 D3790_18330 798d2db45d745d920bde4c89054e5cfc 563 Pfam PF09129 Cholesterol oxidase, substrate-binding 241 561 1.9E-153 T 01-11-2018 IPR015213 Cholesterol oxidase, substrate-binding D3790_18330 798d2db45d745d920bde4c89054e5cfc 563 SUPERFAMILY SSF55103 240 561 1.24E-128 T 01-11-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 D3790_18330 798d2db45d745d920bde4c89054e5cfc 563 Gene3D G3DSA:1.10.45.10 513 562 7.8E-13 T 01-11-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 D3790_18330 798d2db45d745d920bde4c89054e5cfc 563 Gene3D G3DSA:3.30.43.10 35 110 1.8E-24 T 01-11-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 D3790_16485 89ee95d2c80e48aab19edc85befc6fc1 71 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 31 3.4E-6 T 01-11-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM D3790_16485 89ee95d2c80e48aab19edc85befc6fc1 71 SUPERFAMILY SSF143120 1 35 8.89E-7 T 01-11-2018 IPR036165 YefM-like superfamily D3790_16485 89ee95d2c80e48aab19edc85befc6fc1 71 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 1 31 3.0E-5 T 01-11-2018 D3790_06265 bc902da0264a41f37e56daf3e0fed0bd 435 Gene3D G3DSA:3.90.1150.10 20 407 1.3E-99 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_06265 bc902da0264a41f37e56daf3e0fed0bd 435 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 231 267 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_06265 bc902da0264a41f37e56daf3e0fed0bd 435 SUPERFAMILY SSF53383 6 410 1.99E-100 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_06265 bc902da0264a41f37e56daf3e0fed0bd 435 Gene3D G3DSA:3.40.640.10 56 320 1.3E-99 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_06265 bc902da0264a41f37e56daf3e0fed0bd 435 PIRSF PIRSF000521 94 158 0.012 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_06265 bc902da0264a41f37e56daf3e0fed0bd 435 PIRSF PIRSF000521 182 413 2.5E-30 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_06265 bc902da0264a41f37e56daf3e0fed0bd 435 PIRSF PIRSF000521 3 129 0.0057 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_06265 bc902da0264a41f37e56daf3e0fed0bd 435 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 4 412 2.9E-132 T 01-11-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 D3790_06265 bc902da0264a41f37e56daf3e0fed0bd 435 Pfam PF00202 Aminotransferase class-III 19 410 1.3E-75 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_06265 bc902da0264a41f37e56daf3e0fed0bd 435 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 3 410 4.5E-198 T 01-11-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 D3790_11445 fc6fd47113c6cb8fbafe0c245c9db89d 54 Pfam PF10689 Protein of unknown function (DUF2496) 3 44 4.6E-22 T 01-11-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related D3790_08560 13e62eaaf4329c2aaf3f92ebcf77e638 273 Pfam PF13847 Methyltransferase domain 87 208 7.1E-10 T 01-11-2018 IPR025714 Methyltransferase domain D3790_08560 13e62eaaf4329c2aaf3f92ebcf77e638 273 Gene3D G3DSA:3.40.50.150 1 272 4.5E-79 T 01-11-2018 D3790_08560 13e62eaaf4329c2aaf3f92ebcf77e638 273 PIRSF PIRSF018249 1 271 1.8E-83 T 01-11-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 D3790_08560 13e62eaaf4329c2aaf3f92ebcf77e638 273 SUPERFAMILY SSF53335 4 251 1.38E-43 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_07950 e0fca870c80cc38eecac87b257a07700 175 ProSitePatterns PS00336 Beta-lactamase class-C active site. 82 89 - T 01-11-2018 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 D3790_07950 e0fca870c80cc38eecac87b257a07700 175 Gene3D G3DSA:3.40.710.10 24 164 4.2E-48 T 01-11-2018 D3790_07950 e0fca870c80cc38eecac87b257a07700 175 SUPERFAMILY SSF56601 29 157 4.16E-39 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like D3790_07950 e0fca870c80cc38eecac87b257a07700 175 Pfam PF00144 Beta-lactamase 36 151 4.7E-32 T 01-11-2018 IPR001466 Beta-lactamase-related D3790_03620 47700aa53662bb9ab091e5fb29473e73 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 29 6.6E-8 T 01-11-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 D3790_03620 47700aa53662bb9ab091e5fb29473e73 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 8.7E-9 T 01-11-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 D3790_05515 af53703b769f5bd613bdf7d0371bae5f 222 SUPERFAMILY SSF55166 15 179 3.22E-18 T 01-11-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 D3790_05515 af53703b769f5bd613bdf7d0371bae5f 222 Gene3D G3DSA:3.30.1380.10 4 197 5.5E-33 T 01-11-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 D3790_05515 af53703b769f5bd613bdf7d0371bae5f 222 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 22 177 6.7E-37 T 01-11-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 D3790_02690 3da9325c06eaf425770439f386867329 40 Pfam PF06528 Phage P2 GpE 2 38 3.0E-21 T 01-11-2018 IPR009493 Burkholderia phage phiE202, Gp27 D3790_18270 16a5c61af07803a3309c797b83a7b20d 402 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 01-11-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site D3790_18270 16a5c61af07803a3309c797b83a7b20d 402 Gene3D G3DSA:3.40.640.10 34 292 1.0E-141 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_18270 16a5c61af07803a3309c797b83a7b20d 402 Gene3D G3DSA:3.90.1150.10 22 389 1.0E-141 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_18270 16a5c61af07803a3309c797b83a7b20d 402 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 401 1.6E-209 T 01-11-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 D3790_18270 16a5c61af07803a3309c797b83a7b20d 402 SUPERFAMILY SSF53383 4 393 1.05E-107 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_18270 16a5c61af07803a3309c797b83a7b20d 402 Pfam PF00266 Aminotransferase class-V 22 388 2.5E-132 T 01-11-2018 IPR000192 Aminotransferase class V domain D3790_14860 966cb27aaa71bca0f74e080726677950 105 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 10 102 1.8E-36 T 01-11-2018 IPR014056 Addiction module killer protein, predicted D3790_14860 966cb27aaa71bca0f74e080726677950 105 PIRSF PIRSF028744 1 105 2.1E-42 T 01-11-2018 IPR014056 Addiction module killer protein, predicted D3790_14860 966cb27aaa71bca0f74e080726677950 105 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 48 96 8.8E-6 T 01-11-2018 IPR009241 Toxin HigB-like D3790_14930 05a149825a93a5a4be4a508cbbae81be 199 Pfam PF13358 DDE superfamily endonuclease 36 170 6.3E-27 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_14930 05a149825a93a5a4be4a508cbbae81be 199 Gene3D G3DSA:3.30.420.470 6 189 1.7E-9 T 01-11-2018 D3790_12175 4e2cd49cf953f2e6d74335c2a2f5973f 488 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 4 487 2.3E-219 T 01-11-2018 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 D3790_12175 4e2cd49cf953f2e6d74335c2a2f5973f 488 Gene3D G3DSA:3.40.605.10 19 474 5.2E-175 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D3790_12175 4e2cd49cf953f2e6d74335c2a2f5973f 488 Gene3D G3DSA:3.40.309.10 249 445 5.2E-175 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D3790_12175 4e2cd49cf953f2e6d74335c2a2f5973f 488 SUPERFAMILY SSF53720 3 479 9.95E-164 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D3790_12175 4e2cd49cf953f2e6d74335c2a2f5973f 488 Pfam PF00171 Aldehyde dehydrogenase family 16 474 3.9E-170 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D3790_12175 4e2cd49cf953f2e6d74335c2a2f5973f 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 D3790_12175 4e2cd49cf953f2e6d74335c2a2f5973f 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 D3790_02105 59eec638ef6c8646a3e8b2541cfab341 281 Gene3D G3DSA:1.10.3720.10 21 278 3.3E-60 T 01-11-2018 IPR035906 MetI-like superfamily D3790_02105 59eec638ef6c8646a3e8b2541cfab341 281 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 11 274 4.4E-107 T 01-11-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 D3790_02105 59eec638ef6c8646a3e8b2541cfab341 281 SUPERFAMILY SSF161098 16 268 1.09E-53 T 01-11-2018 IPR035906 MetI-like superfamily D3790_02105 59eec638ef6c8646a3e8b2541cfab341 281 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 275 6.6E-116 T 01-11-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 D3790_02105 59eec638ef6c8646a3e8b2541cfab341 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 274 1.8E-13 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_04060 f923f3ace5eb393562274d237a2d26ae 357 Gene3D G3DSA:1.10.150.130 43 142 2.8E-5 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal D3790_04060 f923f3ace5eb393562274d237a2d26ae 357 SUPERFAMILY SSF56349 48 346 1.0E-39 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_04060 f923f3ace5eb393562274d237a2d26ae 357 Gene3D G3DSA:1.10.443.10 166 353 1.9E-16 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_04060 f923f3ace5eb393562274d237a2d26ae 357 Pfam PF00589 Phage integrase family 170 326 6.1E-10 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D3790_19580 624a5717f6a2b5f33e3e0e58b8012857 84 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 84 1.1E-39 T 01-11-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 D3790_19580 624a5717f6a2b5f33e3e0e58b8012857 84 SUPERFAMILY SSF143011 1 83 1.27E-29 T 01-11-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D3790_19580 624a5717f6a2b5f33e3e0e58b8012857 84 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 84 2.6E-35 T 01-11-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 D3790_19580 624a5717f6a2b5f33e3e0e58b8012857 84 Gene3D G3DSA:3.30.2310.20 1 84 3.5E-41 T 01-11-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D3790_14765 2f0b524575d574484a03642c9539274e 415 Pfam PF04932 O-Antigen ligase 198 344 3.1E-15 T 01-11-2018 IPR007016 O-antigen ligase-related D3790_12970 42ba0e6a4970c74af8e62dca488b74df 184 Gene3D G3DSA:3.40.190.10 37 135 4.2E-24 T 01-11-2018 D3790_04510 24dc6fb0915ea683c70b12577f323100 297 Pfam PF03756 A-factor biosynthesis hotdog domain 56 157 1.8E-8 T 01-11-2018 IPR005509 A-factor biosynthesis hotdog domain D3790_12740 bba42a910dd58d66a4b5cfa0a5390ab4 377 SUPERFAMILY SSF110738 1 375 2.22E-141 T 01-11-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 D3790_12740 bba42a910dd58d66a4b5cfa0a5390ab4 377 Gene3D G3DSA:3.40.50.10350 1 362 7.4E-142 T 01-11-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold D3790_12740 bba42a910dd58d66a4b5cfa0a5390ab4 377 Pfam PF02595 Glycerate kinase family 3 373 8.0E-149 T 01-11-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 D3790_12740 bba42a910dd58d66a4b5cfa0a5390ab4 377 PIRSF PIRSF006078 1 377 4.1E-135 T 01-11-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 D3790_12740 bba42a910dd58d66a4b5cfa0a5390ab4 377 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 2.4E-160 T 01-11-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 D3790_12740 bba42a910dd58d66a4b5cfa0a5390ab4 377 Gene3D G3DSA:3.90.1510.10 42 276 7.4E-142 T 01-11-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 D3790_10080 dcdb2e82f496bdefbcc09d67a13e43b4 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 35.428 T 01-11-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 D3790_10080 dcdb2e82f496bdefbcc09d67a13e43b4 299 Gene3D G3DSA:3.40.190.10 103 192 9.0E-74 T 01-11-2018 D3790_10080 dcdb2e82f496bdefbcc09d67a13e43b4 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 202 298 1.1E-30 T 01-11-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 D3790_10080 dcdb2e82f496bdefbcc09d67a13e43b4 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 8.0E-57 T 01-11-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 D3790_10080 dcdb2e82f496bdefbcc09d67a13e43b4 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 1.2E-47 T 01-11-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 D3790_10080 dcdb2e82f496bdefbcc09d67a13e43b4 299 SUPERFAMILY SSF53850 6 224 9.87E-70 T 01-11-2018 D3790_10080 dcdb2e82f496bdefbcc09d67a13e43b4 299 SUPERFAMILY SSF54913 226 298 8.34E-21 T 01-11-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta D3790_10080 dcdb2e82f496bdefbcc09d67a13e43b4 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 01-11-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 D3790_10080 dcdb2e82f496bdefbcc09d67a13e43b4 299 Gene3D G3DSA:3.40.190.10 7 221 9.0E-74 T 01-11-2018 D3790_10080 dcdb2e82f496bdefbcc09d67a13e43b4 299 Gene3D G3DSA:3.30.70.120 226 299 2.7E-33 T 01-11-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal D3790_10080 dcdb2e82f496bdefbcc09d67a13e43b4 299 Pfam PF08029 HisG, C-terminal domain 223 296 3.6E-23 T 01-11-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 D3790_17260 8bff807228d13f27cbb07f603837002c 69 Gene3D G3DSA:1.10.238.160 10 67 9.6E-8 T 01-11-2018 D3790_17260 8bff807228d13f27cbb07f603837002c 69 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 11 59 1.4E-18 T 01-11-2018 IPR010260 DNA-binding transcriptional activator AlpA D3790_14175 f4907206faff979cef2af621b364be77 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.992 T 01-11-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14175 f4907206faff979cef2af621b364be77 117 Gene3D G3DSA:3.30.420.100 1 117 6.9E-46 T 01-11-2018 D3790_14175 f4907206faff979cef2af621b364be77 117 SUPERFAMILY SSF53137 3 115 2.11E-54 T 01-11-2018 D3790_14175 f4907206faff979cef2af621b364be77 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 9.1E-46 T 01-11-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14175 f4907206faff979cef2af621b364be77 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 1.6E-43 T 01-11-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_07560 36dcf278c2379cea1893df0534d19b25 564 TIGRFAM TIGR00815 sulP: sulfate permease 19 555 4.2E-128 T 01-11-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 D3790_07560 36dcf278c2379cea1893df0534d19b25 564 Pfam PF01740 STAS domain 455 555 8.6E-8 T 01-11-2018 IPR002645 STAS domain D3790_07560 36dcf278c2379cea1893df0534d19b25 564 Pfam PF00916 Sulfate permease family 29 412 4.2E-80 T 01-11-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 D3790_07560 36dcf278c2379cea1893df0534d19b25 564 Gene3D G3DSA:3.30.750.24 445 557 5.5E-18 T 01-11-2018 IPR036513 STAS domain superfamily D3790_07560 36dcf278c2379cea1893df0534d19b25 564 ProSitePatterns PS01130 SLC26A transporters signature. 58 79 - T 01-11-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 D3790_07560 36dcf278c2379cea1893df0534d19b25 564 SUPERFAMILY SSF52091 456 546 2.94E-10 T 01-11-2018 IPR036513 STAS domain superfamily D3790_18030 1cd95b869c11224393c9c6ad37071a3e 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 1.5E-161 T 01-11-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain D3790_18030 1cd95b869c11224393c9c6ad37071a3e 386 SUPERFAMILY SSF56059 1 383 1.34E-89 T 01-11-2018 D3790_18030 1cd95b869c11224393c9c6ad37071a3e 386 SUPERFAMILY SSF52440 174 279 4.32E-41 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily D3790_18030 1cd95b869c11224393c9c6ad37071a3e 386 Gene3D G3DSA:3.30.1490.330 263 343 6.0E-28 T 01-11-2018 D3790_12470 27d5441e9fcb189d503bdedd3844cc84 239 Pfam PF00106 short chain dehydrogenase 6 190 2.5E-43 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12470 27d5441e9fcb189d503bdedd3844cc84 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 220 3.6E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12470 27d5441e9fcb189d503bdedd3844cc84 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 3.6E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12470 27d5441e9fcb189d503bdedd3844cc84 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 3.6E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12470 27d5441e9fcb189d503bdedd3844cc84 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 3.6E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12470 27d5441e9fcb189d503bdedd3844cc84 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 3.6E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12470 27d5441e9fcb189d503bdedd3844cc84 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.6E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12470 27d5441e9fcb189d503bdedd3844cc84 239 Gene3D G3DSA:3.40.50.720 2 229 5.0E-52 T 01-11-2018 D3790_12470 27d5441e9fcb189d503bdedd3844cc84 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D3790_12470 27d5441e9fcb189d503bdedd3844cc84 239 SUPERFAMILY SSF51735 3 234 8.0E-54 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_12470 27d5441e9fcb189d503bdedd3844cc84 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.7E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12470 27d5441e9fcb189d503bdedd3844cc84 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 1.7E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12470 27d5441e9fcb189d503bdedd3844cc84 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.7E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_16175 aa7188661051801104c6f5b2b67c8897 174 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 174 16.502 T 01-11-2018 IPR007336 Der GTPase activator GO:0005096 D3790_16175 aa7188661051801104c6f5b2b67c8897 174 Pfam PF04220 Der GTPase activator (YihI) 14 171 3.4E-56 T 01-11-2018 IPR007336 Der GTPase activator GO:0005096 D3790_09820 0ba6fe174328334496551bb92fc75e5c 240 Gene3D G3DSA:1.10.10.2260 88 195 4.5E-48 T 01-11-2018 D3790_09820 0ba6fe174328334496551bb92fc75e5c 240 Pfam PF04288 MukE-like family 10 237 1.5E-123 T 01-11-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 D3790_09820 0ba6fe174328334496551bb92fc75e5c 240 Gene3D G3DSA:1.10.10.2250 1 78 9.7E-39 T 01-11-2018 D3790_09820 0ba6fe174328334496551bb92fc75e5c 240 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 238 47.861 T 01-11-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 D3790_05935 f6bd12e401f1f62e6378df10b738e30d 157 SUPERFAMILY SSF46689 17 132 4.21E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_05935 f6bd12e401f1f62e6378df10b738e30d 157 Pfam PF13551 Winged helix-turn helix 30 90 8.8E-12 T 01-11-2018 D3790_02915 4b7abfc2cc1f2995c315528d990a98d4 398 Pfam PF07690 Major Facilitator Superfamily 18 356 1.3E-20 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_02915 4b7abfc2cc1f2995c315528d990a98d4 398 Gene3D G3DSA:1.20.1250.20 9 392 4.2E-23 T 01-11-2018 D3790_02915 4b7abfc2cc1f2995c315528d990a98d4 398 SUPERFAMILY SSF103473 12 391 1.57E-26 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_00690 25bb34f11476bd8e6b0da9f1ef906992 241 Pfam PF08900 Domain of unknown function (DUF1845) 15 230 4.9E-84 T 01-11-2018 IPR014996 Integrating conjugative element protein, PFL4669 D3790_00690 25bb34f11476bd8e6b0da9f1ef906992 241 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 17 230 2.3E-75 T 01-11-2018 IPR014996 Integrating conjugative element protein, PFL4669 D3790_08390 8d14751733a99bf12660427bea828ba3 304 PRINTS PR00690 Adhesin family signature 65 78 2.4E-44 T 01-11-2018 IPR006128 Adhesion lipoprotein GO:0007155 D3790_08390 8d14751733a99bf12660427bea828ba3 304 PRINTS PR00690 Adhesin family signature 34 52 2.4E-44 T 01-11-2018 IPR006128 Adhesion lipoprotein GO:0007155 D3790_08390 8d14751733a99bf12660427bea828ba3 304 PRINTS PR00690 Adhesin family signature 242 260 2.4E-44 T 01-11-2018 IPR006128 Adhesion lipoprotein GO:0007155 D3790_08390 8d14751733a99bf12660427bea828ba3 304 PRINTS PR00690 Adhesin family signature 78 95 2.4E-44 T 01-11-2018 IPR006128 Adhesion lipoprotein GO:0007155 D3790_08390 8d14751733a99bf12660427bea828ba3 304 PRINTS PR00690 Adhesin family signature 268 287 2.4E-44 T 01-11-2018 IPR006128 Adhesion lipoprotein GO:0007155 D3790_08390 8d14751733a99bf12660427bea828ba3 304 PRINTS PR00690 Adhesin family signature 189 210 2.4E-44 T 01-11-2018 IPR006128 Adhesion lipoprotein GO:0007155 D3790_08390 8d14751733a99bf12660427bea828ba3 304 Gene3D G3DSA:3.40.50.1980 191 304 9.1E-42 T 01-11-2018 D3790_08390 8d14751733a99bf12660427bea828ba3 304 SUPERFAMILY SSF53807 31 303 8.34E-91 T 01-11-2018 D3790_08390 8d14751733a99bf12660427bea828ba3 304 PRINTS PR00691 Adhesin B signature 189 206 3.8E-38 T 01-11-2018 IPR006129 Adhesin B GO:0007155 D3790_08390 8d14751733a99bf12660427bea828ba3 304 PRINTS PR00691 Adhesin B signature 260 278 3.8E-38 T 01-11-2018 IPR006129 Adhesin B GO:0007155 D3790_08390 8d14751733a99bf12660427bea828ba3 304 PRINTS PR00691 Adhesin B signature 238 255 3.8E-38 T 01-11-2018 IPR006129 Adhesin B GO:0007155 D3790_08390 8d14751733a99bf12660427bea828ba3 304 PRINTS PR00691 Adhesin B signature 34 55 3.8E-38 T 01-11-2018 IPR006129 Adhesin B GO:0007155 D3790_08390 8d14751733a99bf12660427bea828ba3 304 PRINTS PR00691 Adhesin B signature 59 77 3.8E-38 T 01-11-2018 IPR006129 Adhesin B GO:0007155 D3790_08390 8d14751733a99bf12660427bea828ba3 304 PRINTS PR00691 Adhesin B signature 78 97 3.8E-38 T 01-11-2018 IPR006129 Adhesin B GO:0007155 D3790_08390 8d14751733a99bf12660427bea828ba3 304 PRINTS PR00691 Adhesin B signature 215 233 3.8E-38 T 01-11-2018 IPR006129 Adhesin B GO:0007155 D3790_08390 8d14751733a99bf12660427bea828ba3 304 Pfam PF01297 Zinc-uptake complex component A periplasmic 37 300 1.1E-77 T 01-11-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 D3790_08390 8d14751733a99bf12660427bea828ba3 304 Gene3D G3DSA:3.40.50.1980 33 190 1.8E-53 T 01-11-2018 D3790_18740 c08d54cfc6ce5d95a8c68aa8da341109 170 Gene3D G3DSA:3.30.1490.190 90 152 3.3E-16 T 01-11-2018 D3790_18740 c08d54cfc6ce5d95a8c68aa8da341109 170 Gene3D G3DSA:1.10.10.10 1 89 2.0E-34 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_18740 c08d54cfc6ce5d95a8c68aa8da341109 170 Pfam PF01475 Ferric uptake regulator family 20 139 4.0E-17 T 01-11-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 D3790_18740 c08d54cfc6ce5d95a8c68aa8da341109 170 SUPERFAMILY SSF46785 12 143 7.5E-33 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_19065 27a501a030769208e1d2c06ddecde20a 281 Gene3D G3DSA:3.60.10.10 62 281 2.0E-18 T 01-11-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D3790_19065 27a501a030769208e1d2c06ddecde20a 281 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 67 272 2.6E-9 T 01-11-2018 IPR005135 Endonuclease/exonuclease/phosphatase D3790_19065 27a501a030769208e1d2c06ddecde20a 281 SUPERFAMILY SSF56219 61 279 3.01E-25 T 01-11-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D3790_14020 c43130615005b3516d183ec47c599d14 112 Pfam PF04219 Protein of unknown function, DUF 10 98 1.3E-39 T 01-11-2018 IPR007335 Protein of unknown function DUF413 D3790_06300 d2cbe6940587016d2fb372865e9fd3a6 542 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 19 531 1.1E-113 T 01-11-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015833|GO:0016021|GO:1904680 D3790_06300 d2cbe6940587016d2fb372865e9fd3a6 542 SUPERFAMILY SSF52540 324 531 1.49E-39 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_06300 d2cbe6940587016d2fb372865e9fd3a6 542 Gene3D G3DSA:3.40.50.300 323 540 3.9E-37 T 01-11-2018 D3790_06300 d2cbe6940587016d2fb372865e9fd3a6 542 SMART SM00382 352 530 1.7E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_06300 d2cbe6940587016d2fb372865e9fd3a6 542 Pfam PF00005 ABC transporter 345 481 4.5E-23 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_06300 d2cbe6940587016d2fb372865e9fd3a6 542 Gene3D G3DSA:1.20.1560.10 5 304 2.5E-29 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_06300 d2cbe6940587016d2fb372865e9fd3a6 542 SUPERFAMILY SSF90123 14 300 3.53E-27 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_06300 d2cbe6940587016d2fb372865e9fd3a6 542 ProSitePatterns PS00211 ABC transporters family signature. 454 468 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_06300 d2cbe6940587016d2fb372865e9fd3a6 542 Pfam PF00664 ABC transporter transmembrane region 16 276 1.4E-12 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D3790_01790 7dff58d13386c82f96e30b451772cc33 144 Pfam PF03230 Antirestriction protein 50 139 9.8E-27 T 01-11-2018 IPR004914 Antirestriction protein D3790_01790 7dff58d13386c82f96e30b451772cc33 144 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 61 139 2.0E-6 T 01-11-2018 IPR004914 Antirestriction protein D3790_01790 7dff58d13386c82f96e30b451772cc33 144 Gene3D G3DSA:1.10.472.120 1 139 6.7E-20 T 01-11-2018 D3790_18420 7287efa421aeeb7fb233166e7dd58c1f 398 SUPERFAMILY SSF51735 2 150 6.89E-47 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_18420 7287efa421aeeb7fb233166e7dd58c1f 398 SUPERFAMILY SSF69055 302 395 7.06E-28 T 01-11-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D3790_18420 7287efa421aeeb7fb233166e7dd58c1f 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 393 1.2E-175 T 01-11-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D3790_18420 7287efa421aeeb7fb233166e7dd58c1f 398 Gene3D G3DSA:3.40.50.720 1 150 5.7E-59 T 01-11-2018 D3790_18420 7287efa421aeeb7fb233166e7dd58c1f 398 PIRSF PIRSF006205 1 398 3.7E-153 T 01-11-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D3790_18420 7287efa421aeeb7fb233166e7dd58c1f 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 386 4.4E-37 T 01-11-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D3790_18420 7287efa421aeeb7fb233166e7dd58c1f 398 SUPERFAMILY SSF55347 126 273 1.18E-60 T 01-11-2018 D3790_18420 7287efa421aeeb7fb233166e7dd58c1f 398 Gene3D G3DSA:1.10.1740.10 312 397 2.1E-27 T 01-11-2018 D3790_18420 7287efa421aeeb7fb233166e7dd58c1f 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 45.606 T 01-11-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D3790_18420 7287efa421aeeb7fb233166e7dd58c1f 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 2.7E-35 T 01-11-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D3790_18420 7287efa421aeeb7fb233166e7dd58c1f 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 4.0E-49 T 01-11-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D3790_16470 488771f8eb8dbedd034b1f22d90691cb 305 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 74 1.7E-13 T 01-11-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain D3790_16470 488771f8eb8dbedd034b1f22d90691cb 305 SUPERFAMILY SSF161098 98 285 4.45E-28 T 01-11-2018 IPR035906 MetI-like superfamily D3790_16470 488771f8eb8dbedd034b1f22d90691cb 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 304 2.8E-28 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_16470 488771f8eb8dbedd034b1f22d90691cb 305 Gene3D G3DSA:1.10.3720.10 93 300 2.5E-22 T 01-11-2018 IPR035906 MetI-like superfamily D3790_08160 cfd852abb1a130383fa24eb777f0d0fd 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 385 3.6E-100 T 01-11-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 D3790_08160 cfd852abb1a130383fa24eb777f0d0fd 397 Pfam PF07690 Major Facilitator Superfamily 17 346 4.6E-42 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_08160 cfd852abb1a130383fa24eb777f0d0fd 397 Gene3D G3DSA:1.20.1720.10 11 386 3.6E-76 T 01-11-2018 D3790_08160 cfd852abb1a130383fa24eb777f0d0fd 397 SUPERFAMILY SSF103473 6 384 1.44E-60 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_09585 02ab703dcb6c4a3ce6951f26be755a31 62 Pfam PF06069 PerC transcriptional activator 9 55 4.1E-7 T 01-11-2018 IPR024684 Transcriptional activator PerC/bacteriophage SfV Orf40 D3790_07105 1782c2c34b99917f1e274f22bbdeab54 462 PIRSF PIRSF000204 1 462 5.5E-235 T 01-11-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 D3790_07105 1782c2c34b99917f1e274f22bbdeab54 462 SUPERFAMILY SSF52467 290 462 1.03E-75 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily D3790_07105 1782c2c34b99917f1e274f22bbdeab54 462 Gene3D G3DSA:3.40.50.1220 286 462 3.4E-86 T 01-11-2018 D3790_07105 1782c2c34b99917f1e274f22bbdeab54 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 6.8E-203 T 01-11-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 D3790_03705 a421252601f6fa9835848201e1ea2249 38 Pfam PF08173 Membrane bound YbgT-like protein 1 27 2.3E-15 T 01-11-2018 IPR012994 Membrane bound YbgT-like D3790_03705 a421252601f6fa9835848201e1ea2249 38 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 3.0E-19 T 01-11-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 D3790_19385 596fc2d939b81846e80bcde7fea6a856 211 SUPERFAMILY SSF55186 85 202 6.93E-24 T 01-11-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 D3790_19385 596fc2d939b81846e80bcde7fea6a856 211 Gene3D G3DSA:3.30.980.10 85 209 5.6E-17 T 01-11-2018 D3790_19385 596fc2d939b81846e80bcde7fea6a856 211 SUPERFAMILY SSF50447 6 75 5.3E-13 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily D3790_19385 596fc2d939b81846e80bcde7fea6a856 211 Gene3D G3DSA:2.40.30.130 2 78 3.1E-16 T 01-11-2018 D3790_19385 596fc2d939b81846e80bcde7fea6a856 211 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 175 198 1.6E-4 T 01-11-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 D3790_13420 a85be1d54b3f79a081490507cc2892bb 85 Pfam PF01016 Ribosomal L27 protein 2 82 4.2E-39 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13420 a85be1d54b3f79a081490507cc2892bb 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.213 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13420 a85be1d54b3f79a081490507cc2892bb 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 01-11-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_13420 a85be1d54b3f79a081490507cc2892bb 85 SUPERFAMILY SSF110324 2 79 4.88E-34 T 01-11-2018 D3790_13420 a85be1d54b3f79a081490507cc2892bb 85 Gene3D G3DSA:2.40.50.100 21 85 8.0E-31 T 01-11-2018 D3790_13420 a85be1d54b3f79a081490507cc2892bb 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.8E-39 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13420 a85be1d54b3f79a081490507cc2892bb 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.8E-39 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13420 a85be1d54b3f79a081490507cc2892bb 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.8E-39 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13420 a85be1d54b3f79a081490507cc2892bb 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 9.7E-44 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_13420 a85be1d54b3f79a081490507cc2892bb 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 7.0E-19 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_03040 cbf482f5d390517c50798cd2d81e2080 325 Pfam PF01479 S4 domain 18 64 8.7E-10 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_03040 cbf482f5d390517c50798cd2d81e2080 325 Gene3D G3DSA:3.10.290.10 2 76 4.3E-23 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D3790_03040 cbf482f5d390517c50798cd2d81e2080 325 Pfam PF00849 RNA pseudouridylate synthase 92 242 2.2E-31 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_03040 cbf482f5d390517c50798cd2d81e2080 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 312 1.9E-105 T 01-11-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_03040 cbf482f5d390517c50798cd2d81e2080 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 01-11-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_03040 cbf482f5d390517c50798cd2d81e2080 325 Gene3D G3DSA:3.30.2350.10 84 316 8.8E-72 T 01-11-2018 D3790_03040 cbf482f5d390517c50798cd2d81e2080 325 SUPERFAMILY SSF55120 77 322 3.7E-79 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_03040 cbf482f5d390517c50798cd2d81e2080 325 SUPERFAMILY SSF55174 17 69 3.03E-10 T 01-11-2018 D3790_03040 cbf482f5d390517c50798cd2d81e2080 325 SMART SM00363 18 76 1.4E-9 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14150 f6439036b7793ca11c18d33d7bac2da4 38 Pfam PF00444 Ribosomal protein L36 1 38 2.2E-20 T 01-11-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14150 f6439036b7793ca11c18d33d7bac2da4 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.855 T 01-11-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14150 f6439036b7793ca11c18d33d7bac2da4 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 01-11-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14150 f6439036b7793ca11c18d33d7bac2da4 38 SUPERFAMILY SSF57840 1 38 5.76E-17 T 01-11-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14150 f6439036b7793ca11c18d33d7bac2da4 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 5.0E-10 T 01-11-2018 D3790_14150 f6439036b7793ca11c18d33d7bac2da4 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 5.1E-22 T 01-11-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_15790 8cb188fdac45097a25392a0ed1a79953 414 SUPERFAMILY SSF56801 31 294 1.7E-12 T 01-11-2018 D3790_15790 8cb188fdac45097a25392a0ed1a79953 414 Gene3D G3DSA:3.40.50.12780 2 306 1.5E-42 T 01-11-2018 D3790_15800 fefd95f80b5a42acf96c018b73cc4593 231 PIRSF PIRSF006232 1 227 7.2E-55 T 01-11-2018 IPR012093 Pirin Reactome: R-HSA-8935690 D3790_15800 fefd95f80b5a42acf96c018b73cc4593 231 Pfam PF02678 Pirin 9 119 5.9E-36 T 01-11-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 D3790_15800 fefd95f80b5a42acf96c018b73cc4593 231 Gene3D G3DSA:2.60.120.10 7 228 3.7E-94 T 01-11-2018 IPR014710 RmlC-like jelly roll fold D3790_15800 fefd95f80b5a42acf96c018b73cc4593 231 SUPERFAMILY SSF51182 1 228 1.13E-77 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily D3790_15800 fefd95f80b5a42acf96c018b73cc4593 231 Gene3D G3DSA:2.60.120.10 11 135 3.7E-94 T 01-11-2018 IPR014710 RmlC-like jelly roll fold D3790_19595 65cf263fab6f4bddb04f182aa8f50798 318 Pfam PF01032 FecCD transport family 13 316 5.9E-90 T 01-11-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 D3790_19595 65cf263fab6f4bddb04f182aa8f50798 318 Gene3D G3DSA:1.10.3470.10 1 318 7.4E-92 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_19595 65cf263fab6f4bddb04f182aa8f50798 318 SUPERFAMILY SSF81345 3 316 1.09E-76 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_19680 b4e162334c717fd23af434884ac17579 97 Pfam PF09707 CRISPR-associated protein (Cas_Cas2CT1978) 3 88 4.4E-39 T 01-11-2018 IPR010152 CRISPR-associated protein Cas2 subtype D3790_19680 b4e162334c717fd23af434884ac17579 97 TIGRFAM TIGR01873 cas_CT1978: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI 3 88 9.8E-39 T 01-11-2018 IPR010152 CRISPR-associated protein Cas2 subtype D3790_19680 b4e162334c717fd23af434884ac17579 97 Gene3D G3DSA:3.30.70.240 1 77 2.6E-34 T 01-11-2018 D3790_18205 31e6d30c32d3437b7a8a83ecb064762e 127 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 35 121 1.4E-29 T 01-11-2018 IPR022204 Prepilin peptidase dependent protein C D3790_18205 31e6d30c32d3437b7a8a83ecb064762e 127 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 33 1.2E-5 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site D3790_18205 31e6d30c32d3437b7a8a83ecb064762e 127 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site D3790_18205 31e6d30c32d3437b7a8a83ecb064762e 127 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 5.4E-6 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site D3790_15180 d4b9cb8200da85359dcef4bf15371e68 102 Pfam PF04216 Protein involved in formate dehydrogenase formation 4 49 1.5E-10 T 01-11-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 D3790_15180 d4b9cb8200da85359dcef4bf15371e68 102 SUPERFAMILY SSF144020 5 52 8.63E-10 T 01-11-2018 IPR024064 FdhE-like superfamily D3790_15180 d4b9cb8200da85359dcef4bf15371e68 102 Gene3D G3DSA:3.90.1670.10 2 96 4.3E-9 T 01-11-2018 IPR024064 FdhE-like superfamily D3790_08475 0f16219db630bce9784525320aa2e699 165 Gene3D G3DSA:3.30.450.40 1 165 1.2E-65 T 01-11-2018 IPR029016 GAF-like domain superfamily D3790_08475 0f16219db630bce9784525320aa2e699 165 SUPERFAMILY SSF55781 3 152 1.47E-40 T 01-11-2018 D3790_08475 0f16219db630bce9784525320aa2e699 165 Pfam PF13185 GAF domain 43 143 1.1E-8 T 01-11-2018 IPR003018 GAF domain GO:0005515 D3790_08475 0f16219db630bce9784525320aa2e699 165 SMART SM00065 23 161 0.0012 T 01-11-2018 IPR003018 GAF domain GO:0005515 D3790_13890 0e3114df0d4ad0b0fcd6d8d23b7f8d02 376 PIRSF PIRSF000390 1 376 1.5E-114 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase D3790_13890 0e3114df0d4ad0b0fcd6d8d23b7f8d02 376 Gene3D G3DSA:3.40.640.10 1 249 1.4E-83 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_13890 0e3114df0d4ad0b0fcd6d8d23b7f8d02 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 81.01 T 01-11-2018 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315 D3790_13890 0e3114df0d4ad0b0fcd6d8d23b7f8d02 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 373 3.1E-209 T 01-11-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 D3790_13890 0e3114df0d4ad0b0fcd6d8d23b7f8d02 376 SUPERFAMILY SSF53383 2 375 7.75E-103 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_13890 0e3114df0d4ad0b0fcd6d8d23b7f8d02 376 Gene3D G3DSA:3.90.1150.10 250 376 1.7E-28 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_13890 0e3114df0d4ad0b0fcd6d8d23b7f8d02 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 369 2.3E-85 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase D3790_15025 e2940e6ccb71e386da3e8b3731d6ddb0 439 TIGRFAM TIGR04370 glyco_rpt_poly: oligosaccharide repeat unit polymerase 28 417 1.7E-11 T 01-11-2018 D3790_11145 256b7f27f781a2d6a7af1070d55a07a1 316 Gene3D G3DSA:3.30.420.470 139 316 2.0E-15 T 01-11-2018 D3790_11145 256b7f27f781a2d6a7af1070d55a07a1 316 Pfam PF13592 Winged helix-turn helix 103 161 7.6E-18 T 01-11-2018 IPR025959 Winged helix-turn helix domain D3790_11145 256b7f27f781a2d6a7af1070d55a07a1 316 Pfam PF13384 Homeodomain-like domain 20 64 6.3E-11 T 01-11-2018 D3790_11145 256b7f27f781a2d6a7af1070d55a07a1 316 SUPERFAMILY SSF46689 16 136 3.67E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_11145 256b7f27f781a2d6a7af1070d55a07a1 316 Pfam PF13358 DDE superfamily endonuclease 176 315 3.7E-34 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_03150 5dd67d0fdbb553978a25b64d3f9fb638 375 Gene3D G3DSA:3.40.640.10 49 273 1.6E-62 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_03150 5dd67d0fdbb553978a25b64d3f9fb638 375 SUPERFAMILY SSF53383 36 365 1.22E-49 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_03150 5dd67d0fdbb553978a25b64d3f9fb638 375 Pfam PF00155 Aminotransferase class I and II 40 360 3.0E-29 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D3790_03150 5dd67d0fdbb553978a25b64d3f9fb638 375 Gene3D G3DSA:3.90.1150.10 41 362 1.6E-62 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_14780 f9bf34211e3a41e9f790bad6062f7dc3 269 SUPERFAMILY SSF53448 2 152 3.56E-26 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_14780 f9bf34211e3a41e9f790bad6062f7dc3 269 Gene3D G3DSA:3.90.550.10 1 240 4.0E-25 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_14780 f9bf34211e3a41e9f790bad6062f7dc3 269 Pfam PF00535 Glycosyl transferase family 2 8 128 2.5E-15 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 D3790_06120 3944cd3cc8632ae52b37c117a6933e7d 222 Gene3D G3DSA:3.40.50.850 1 214 8.0E-67 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 D3790_06120 3944cd3cc8632ae52b37c117a6933e7d 222 SUPERFAMILY SSF52499 2 214 2.62E-50 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 D3790_06120 3944cd3cc8632ae52b37c117a6933e7d 222 Pfam PF00857 Isochorismatase family 3 210 1.6E-35 T 01-11-2018 IPR000868 Isochorismatase-like GO:0003824 D3790_03155 be1bce498a6dd11ca9364b9fc35c0b04 513 Gene3D G3DSA:1.20.1720.10 15 220 3.4E-45 T 01-11-2018 D3790_03155 be1bce498a6dd11ca9364b9fc35c0b04 513 SUPERFAMILY SSF103473 7 500 5.1E-68 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_03155 be1bce498a6dd11ca9364b9fc35c0b04 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 404 423 1.3E-7 T 01-11-2018 D3790_03155 be1bce498a6dd11ca9364b9fc35c0b04 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 1.3E-7 T 01-11-2018 D3790_03155 be1bce498a6dd11ca9364b9fc35c0b04 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 1.3E-7 T 01-11-2018 D3790_03155 be1bce498a6dd11ca9364b9fc35c0b04 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 1.3E-7 T 01-11-2018 D3790_03155 be1bce498a6dd11ca9364b9fc35c0b04 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 164 188 1.3E-7 T 01-11-2018 D3790_03155 be1bce498a6dd11ca9364b9fc35c0b04 513 Pfam PF07690 Major Facilitator Superfamily 20 413 6.2E-48 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_03155 be1bce498a6dd11ca9364b9fc35c0b04 513 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 496 8.8E-197 T 01-11-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 D3790_12200 d88b7a6a5ffb199228974c50ff83b2f5 88 Gene3D G3DSA:1.10.260.40 3 72 8.3E-34 T 01-11-2018 D3790_12200 d88b7a6a5ffb199228974c50ff83b2f5 88 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 1.7E-38 T 01-11-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain D3790_12200 d88b7a6a5ffb199228974c50ff83b2f5 88 SUPERFAMILY SSF47413 4 71 6.47E-31 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_02150 a1f0aad9f124c9a78b9e02d924e40803 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 70.774 T 01-11-2018 IPR000037 SsrA-binding protein GO:0003723 D3790_02150 a1f0aad9f124c9a78b9e02d924e40803 160 SUPERFAMILY SSF74982 8 138 4.45E-49 T 01-11-2018 IPR023620 Small protein B D3790_02150 a1f0aad9f124c9a78b9e02d924e40803 160 Pfam PF01668 SmpB protein 14 157 2.0E-55 T 01-11-2018 IPR000037 SsrA-binding protein GO:0003723 D3790_02150 a1f0aad9f124c9a78b9e02d924e40803 160 Gene3D G3DSA:2.40.280.10 7 135 4.0E-44 T 01-11-2018 IPR023620 Small protein B D3790_02150 a1f0aad9f124c9a78b9e02d924e40803 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 1.0E-57 T 01-11-2018 IPR000037 SsrA-binding protein GO:0003723 D3790_02150 a1f0aad9f124c9a78b9e02d924e40803 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 2.9E-52 T 01-11-2018 IPR000037 SsrA-binding protein GO:0003723 D3790_02150 a1f0aad9f124c9a78b9e02d924e40803 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 01-11-2018 IPR020081 SsrA-binding protein, conserved site D3790_17655 7097d4555a82147bd488ca210668b8a1 242 Gene3D G3DSA:1.10.3810.10 49 238 2.1E-55 T 01-11-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_17655 7097d4555a82147bd488ca210668b8a1 242 SUPERFAMILY SSF53955 53 227 9.84E-62 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily D3790_17655 7097d4555a82147bd488ca210668b8a1 242 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 10 226 9.5E-84 T 01-11-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_17655 7097d4555a82147bd488ca210668b8a1 242 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 7 229 39.911 T 01-11-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_17655 7097d4555a82147bd488ca210668b8a1 242 Pfam PF00912 Transglycosylase 56 224 5.5E-53 T 01-11-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_11330 e793bfc8e96e8c0d2959eec14b1e62d1 253 Pfam PF13586 Transposase DDE domain 163 248 2.5E-18 T 01-11-2018 IPR025668 Transposase DDE domain D3790_11330 e793bfc8e96e8c0d2959eec14b1e62d1 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 77 8.8E-23 T 01-11-2018 IPR025161 Putative transposase IS4/IS5 family D3790_03640 c83a75a95fc95e8440be84bfe33a3a7a 373 SUPERFAMILY SSF103473 5 367 3.14E-47 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_03640 c83a75a95fc95e8440be84bfe33a3a7a 373 Pfam PF07690 Major Facilitator Superfamily 20 344 7.1E-35 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_03640 c83a75a95fc95e8440be84bfe33a3a7a 373 Gene3D G3DSA:1.20.1720.10 7 370 1.3E-71 T 01-11-2018 D3790_17045 75b9186fd057a4a2fb5ffc4eef50a9c9 258 Gene3D G3DSA:3.40.50.300 70 248 5.9E-26 T 01-11-2018 D3790_17045 75b9186fd057a4a2fb5ffc4eef50a9c9 258 Pfam PF13087 AAA domain 124 225 3.1E-14 T 01-11-2018 D3790_17045 75b9186fd057a4a2fb5ffc4eef50a9c9 258 SUPERFAMILY SSF52540 2 234 1.75E-16 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09845 4878308706ebaf57a30e43d887725442 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 26.827 T 01-11-2018 IPR038053 Uncharacterised protein family UPF0434 D3790_09845 4878308706ebaf57a30e43d887725442 59 Gene3D G3DSA:2.20.25.10 8 59 2.8E-23 T 01-11-2018 D3790_09845 4878308706ebaf57a30e43d887725442 59 Pfam PF03966 Trm112p-like protein 2 41 1.8E-9 T 01-11-2018 IPR005651 Trm112-like D3790_09845 4878308706ebaf57a30e43d887725442 59 SUPERFAMILY SSF158997 1 55 5.89E-20 T 01-11-2018 D3790_04570 a1f6ae8aadf66ad6bb73e05f78eee6d9 376 SUPERFAMILY SSF47240 3 340 7.87E-115 T 01-11-2018 IPR009078 Ferritin-like superfamily D3790_04570 a1f6ae8aadf66ad6bb73e05f78eee6d9 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 01-11-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D3790_04570 a1f6ae8aadf66ad6bb73e05f78eee6d9 376 Gene3D G3DSA:1.10.620.20 2 340 6.0E-150 T 01-11-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 D3790_04570 a1f6ae8aadf66ad6bb73e05f78eee6d9 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 1.7E-49 T 01-11-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D3790_02715 640665043d4f081b6742e9242e7a64e4 72 Gene3D G3DSA:1.20.58.660 1 72 4.9E-22 T 01-11-2018 D3790_02715 640665043d4f081b6742e9242e7a64e4 72 Pfam PF04325 Protein of unknown function (DUF465) 19 66 2.8E-14 T 01-11-2018 IPR007420 Protein of unknown function DUF465 D3790_15745 4ffe8e4f1b16837f70d9c0f074c14b43 55 Gene3D G3DSA:2.10.260.10 1 45 1.6E-13 T 01-11-2018 D3790_15745 4ffe8e4f1b16837f70d9c0f074c14b43 55 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 45 2.5E-8 T 01-11-2018 IPR007159 SpoVT-AbrB domain GO:0003677 D3790_15745 4ffe8e4f1b16837f70d9c0f074c14b43 55 SUPERFAMILY SSF89447 1 48 7.15E-14 T 01-11-2018 IPR037914 SpoVT-AbrB domain superfamily D3790_15745 4ffe8e4f1b16837f70d9c0f074c14b43 55 SMART SM00966 6 51 5.3E-6 T 01-11-2018 IPR007159 SpoVT-AbrB domain GO:0003677 D3790_03775 6d5539d08a82b9c8aa2b8f4e8164e738 275 Pfam PF02517 CAAX protease self-immunity 169 260 2.2E-19 T 01-11-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 D3790_19315 44e211f1a93d25cdd5ff2c839950ef74 259 SMART SM01133 10 246 2.3E-77 T 01-11-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 D3790_19315 44e211f1a93d25cdd5ff2c839950ef74 259 SUPERFAMILY SSF51569 6 246 8.69E-81 T 01-11-2018 D3790_19315 44e211f1a93d25cdd5ff2c839950ef74 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 232 3.9E-80 T 01-11-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 D3790_19315 44e211f1a93d25cdd5ff2c839950ef74 259 Pfam PF01791 DeoC/LacD family aldolase 13 244 1.6E-45 T 01-11-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 D3790_19315 44e211f1a93d25cdd5ff2c839950ef74 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 53.307 T 01-11-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 D3790_19315 44e211f1a93d25cdd5ff2c839950ef74 259 PIRSF PIRSF001357 5 255 1.9E-77 T 01-11-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 D3790_19315 44e211f1a93d25cdd5ff2c839950ef74 259 Gene3D G3DSA:3.20.20.70 1 259 6.5E-102 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_17725 cd8ecbacc81732c2140064f830895498 133 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 17 127 6.7E-20 T 01-11-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III D3790_02240 899226bd1bc9ad4bd7f5bb6edab1c453 226 Gene3D G3DSA:1.10.1520.10 4 147 5.7E-45 T 01-11-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 D3790_02240 899226bd1bc9ad4bd7f5bb6edab1c453 226 SUPERFAMILY SSF54768 109 223 1.73E-28 T 01-11-2018 D3790_02240 899226bd1bc9ad4bd7f5bb6edab1c453 226 SMART SM00358 156 224 3.5E-24 T 01-11-2018 IPR014720 Double-stranded RNA-binding domain D3790_02240 899226bd1bc9ad4bd7f5bb6edab1c453 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 3.2E-15 T 01-11-2018 IPR014720 Double-stranded RNA-binding domain D3790_02240 899226bd1bc9ad4bd7f5bb6edab1c453 226 SMART SM00535 21 149 3.8E-59 T 01-11-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 D3790_02240 899226bd1bc9ad4bd7f5bb6edab1c453 226 Gene3D G3DSA:3.30.160.20 154 224 1.5E-20 T 01-11-2018 D3790_02240 899226bd1bc9ad4bd7f5bb6edab1c453 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.694 T 01-11-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 D3790_02240 899226bd1bc9ad4bd7f5bb6edab1c453 226 Pfam PF14622 Ribonuclease-III-like 21 140 2.0E-34 T 01-11-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 D3790_02240 899226bd1bc9ad4bd7f5bb6edab1c453 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 3.3E-75 T 01-11-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 D3790_02240 899226bd1bc9ad4bd7f5bb6edab1c453 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 01-11-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 D3790_02240 899226bd1bc9ad4bd7f5bb6edab1c453 226 SUPERFAMILY SSF69065 6 159 1.46E-49 T 01-11-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 D3790_06505 5e6fa4f62521420c201c71550e186a56 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 35.787 T 01-11-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 D3790_06505 5e6fa4f62521420c201c71550e186a56 389 SMART SM00028 180 213 14.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D3790_06505 5e6fa4f62521420c201c71550e186a56 389 SMART SM00028 141 174 480.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D3790_06505 5e6fa4f62521420c201c71550e186a56 389 SMART SM00028 214 247 24.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D3790_06505 5e6fa4f62521420c201c71550e186a56 389 SMART SM00028 69 102 30.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D3790_06505 5e6fa4f62521420c201c71550e186a56 389 Pfam PF14559 Tetratricopeptide repeat 192 246 2.3E-6 T 01-11-2018 D3790_06505 5e6fa4f62521420c201c71550e186a56 389 Gene3D G3DSA:1.25.40.10 42 178 6.9E-15 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_06505 5e6fa4f62521420c201c71550e186a56 389 Pfam PF13176 Tetratricopeptide repeat 71 98 0.021 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D3790_06505 5e6fa4f62521420c201c71550e186a56 389 SUPERFAMILY SSF48452 110 277 2.69E-15 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_06505 5e6fa4f62521420c201c71550e186a56 389 SUPERFAMILY SSF48452 38 135 7.84E-6 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_06505 5e6fa4f62521420c201c71550e186a56 389 Gene3D G3DSA:1.25.40.10 179 352 3.2E-12 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_17880 ecf98725efeec96f95ddc88f283d6a98 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 143 6.0E-24 T 01-11-2018 IPR008514 Type VI secretion system effector, Hcp D3790_17880 ecf98725efeec96f95ddc88f283d6a98 159 SUPERFAMILY SSF141452 2 153 5.49E-35 T 01-11-2018 IPR036624 Hcp1-like superfamily D3790_17880 ecf98725efeec96f95ddc88f283d6a98 159 Gene3D G3DSA:2.30.110.20 2 158 1.3E-52 T 01-11-2018 IPR036624 Hcp1-like superfamily D3790_17880 ecf98725efeec96f95ddc88f283d6a98 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 155 6.2E-60 T 01-11-2018 IPR008514 Type VI secretion system effector, Hcp D3790_15145 398429afca169932b9364f068c62a3b3 218 Gene3D G3DSA:1.10.10.10 4 101 1.5E-7 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_15145 398429afca169932b9364f068c62a3b3 218 SUPERFAMILY SSF46785 18 197 6.56E-26 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_17455 51e5657f6a6fa72cda74b17b87b75411 410 SUPERFAMILY SSF51419 47 271 3.66E-42 T 01-11-2018 IPR029066 PLP-binding barrel D3790_17455 51e5657f6a6fa72cda74b17b87b75411 410 SUPERFAMILY SSF50621 272 407 1.05E-39 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D3790_17455 51e5657f6a6fa72cda74b17b87b75411 410 Gene3D G3DSA:2.40.37.10 43 403 6.8E-131 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D3790_17455 51e5657f6a6fa72cda74b17b87b75411 410 PRINTS PR00992 Alanine racemase signature 200 211 1.0E-33 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_17455 51e5657f6a6fa72cda74b17b87b75411 410 PRINTS PR00992 Alanine racemase signature 295 310 1.0E-33 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_17455 51e5657f6a6fa72cda74b17b87b75411 410 PRINTS PR00992 Alanine racemase signature 66 82 1.0E-33 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_17455 51e5657f6a6fa72cda74b17b87b75411 410 PRINTS PR00992 Alanine racemase signature 102 120 1.0E-33 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_17455 51e5657f6a6fa72cda74b17b87b75411 410 PRINTS PR00992 Alanine racemase signature 333 350 1.0E-33 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_17455 51e5657f6a6fa72cda74b17b87b75411 410 PRINTS PR00992 Alanine racemase signature 312 327 1.0E-33 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_17455 51e5657f6a6fa72cda74b17b87b75411 410 PRINTS PR00992 Alanine racemase signature 243 270 1.0E-33 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_17455 51e5657f6a6fa72cda74b17b87b75411 410 Gene3D G3DSA:3.20.20.10 49 266 6.8E-131 T 01-11-2018 IPR029066 PLP-binding barrel D3790_17455 51e5657f6a6fa72cda74b17b87b75411 410 Hamap MF_01201 Alanine racemase. 40 407 23.697 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_17455 51e5657f6a6fa72cda74b17b87b75411 410 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 71 81 - T 01-11-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_17455 51e5657f6a6fa72cda74b17b87b75411 410 Pfam PF00842 Alanine racemase, C-terminal domain 280 405 3.6E-32 T 01-11-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_17455 51e5657f6a6fa72cda74b17b87b75411 410 Pfam PF01168 Alanine racemase, N-terminal domain 47 268 7.9E-45 T 01-11-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_17455 51e5657f6a6fa72cda74b17b87b75411 410 TIGRFAM TIGR00492 alr: alanine racemase 42 388 1.3E-68 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_17455 51e5657f6a6fa72cda74b17b87b75411 410 SMART SM01005 279 407 8.2E-42 T 01-11-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D3790_11495 8683c83159fd673ee379378a5bfeb4e4 436 SUPERFAMILY SSF53613 37 417 1.33E-44 T 01-11-2018 IPR029056 Ribokinase-like D3790_11495 8683c83159fd673ee379378a5bfeb4e4 436 Pfam PF00294 pfkB family carbohydrate kinase 142 305 4.0E-10 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB D3790_02685 5e7d3371ee16a8078a0e30bf59e8564c 105 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 15 93 6.9E-8 T 01-11-2018 IPR019289 Bacteriophage tail protein Gp41, putative D3790_01170 5874dcd1d2613f281e0779e3f7ef01fe 244 Pfam PF11101 Protein of unknown function (DUF2884) 27 244 6.1E-36 T 01-11-2018 IPR021307 Protein of unknown function DUF2884 D3790_10680 1a08f98256bf6c9c25606d7d892eebed 426 Gene3D G3DSA:1.10.287.470 107 236 1.2E-42 T 01-11-2018 D3790_10680 1a08f98256bf6c9c25606d7d892eebed 426 Gene3D G3DSA:2.40.50.100 73 279 1.2E-42 T 01-11-2018 D3790_10680 1a08f98256bf6c9c25606d7d892eebed 426 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 321 2.9E-13 T 01-11-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D3790_10680 1a08f98256bf6c9c25606d7d892eebed 426 Gene3D G3DSA:2.40.30.170 62 364 1.2E-42 T 01-11-2018 D3790_10680 1a08f98256bf6c9c25606d7d892eebed 426 SUPERFAMILY SSF51230 71 114 2.82E-6 T 01-11-2018 IPR011053 Single hybrid motif D3790_10680 1a08f98256bf6c9c25606d7d892eebed 426 Gene3D G3DSA:2.40.420.20 59 420 1.2E-42 T 01-11-2018 D3790_07505 5f95503f5a12a1f4b4e88650fb2239ab 187 Pfam PF07273 Protein of unknown function (DUF1439) 27 179 9.3E-48 T 01-11-2018 IPR010835 Protein of unknown function DUF1439 D3790_07505 5f95503f5a12a1f4b4e88650fb2239ab 187 Gene3D G3DSA:3.15.10.40 16 187 3.5E-57 T 01-11-2018 D3790_00610 6a21f62766c039017807883f471d4c9d 84 Pfam PF01051 Initiator Replication protein 6 71 4.1E-15 T 01-11-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 D3790_00610 6a21f62766c039017807883f471d4c9d 84 Gene3D G3DSA:1.10.10.10 2 81 2.8E-12 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_00610 6a21f62766c039017807883f471d4c9d 84 SUPERFAMILY SSF46785 7 76 1.31E-14 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_16040 da87cc230a85d81fb82d3a324b1a63c4 480 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 221 463 5.8E-79 T 01-11-2018 IPR017739 Type VI secretion system-associated, VCA0119 D3790_16040 da87cc230a85d81fb82d3a324b1a63c4 480 Pfam PF06812 ImpA, N-terminal, type VI secretion system 14 112 5.8E-14 T 01-11-2018 IPR010657 ImpA, N-terminal D3790_16040 da87cc230a85d81fb82d3a324b1a63c4 480 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 9 462 1.0E-143 T 01-11-2018 IPR017739 Type VI secretion system-associated, VCA0119 D3790_18610 b15f78beb62f8a549dc61476e8f0e4d7 383 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 5 378 2.0E-90 T 01-11-2018 IPR024455 Phage capsid D3790_18610 b15f78beb62f8a549dc61476e8f0e4d7 383 Pfam PF05065 Phage capsid family 102 377 6.0E-59 T 01-11-2018 IPR024455 Phage capsid D3790_18610 b15f78beb62f8a549dc61476e8f0e4d7 383 Gene3D G3DSA:3.30.2320.10 247 342 6.5E-6 T 01-11-2018 D3790_18610 b15f78beb62f8a549dc61476e8f0e4d7 383 SUPERFAMILY SSF56563 94 379 5.36E-58 T 01-11-2018 D3790_05295 0525cdd35019ee612ecf5524b19071c0 209 Gene3D G3DSA:3.30.70.580 20 95 6.9E-28 T 01-11-2018 D3790_05295 0525cdd35019ee612ecf5524b19071c0 209 Pfam PF00849 RNA pseudouridylate synthase 32 177 5.6E-16 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_05295 0525cdd35019ee612ecf5524b19071c0 209 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 36 207 1.6E-58 T 01-11-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 D3790_05295 0525cdd35019ee612ecf5524b19071c0 209 Gene3D G3DSA:3.30.70.1560 96 196 1.1E-41 T 01-11-2018 D3790_05295 0525cdd35019ee612ecf5524b19071c0 209 SUPERFAMILY SSF55120 31 207 9.92E-44 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_05295 0525cdd35019ee612ecf5524b19071c0 209 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 67 81 - T 01-11-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 D3790_08885 279dd910724e653c9a28d4d3188bdc7b 116 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 100 1.8E-41 T 01-11-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 D3790_08885 279dd910724e653c9a28d4d3188bdc7b 116 SUPERFAMILY SSF63592 1 98 7.45E-38 T 01-11-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily D3790_08885 279dd910724e653c9a28d4d3188bdc7b 116 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 9 98 6.0E-47 T 01-11-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 D3790_08885 279dd910724e653c9a28d4d3188bdc7b 116 Gene3D G3DSA:1.10.4000.10 1 116 8.4E-49 T 01-11-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily D3790_08885 279dd910724e653c9a28d4d3188bdc7b 116 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 29.215 T 01-11-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 D3790_04275 62217fcde83b38e83a776b08bbe81154 311 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 296 1.3E-127 T 01-11-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 D3790_04275 62217fcde83b38e83a776b08bbe81154 311 SUPERFAMILY SSF53335 15 292 2.5E-49 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_04275 62217fcde83b38e83a776b08bbe81154 311 Gene3D G3DSA:1.10.8.10 15 105 2.1E-6 T 01-11-2018 D3790_04275 62217fcde83b38e83a776b08bbe81154 311 Gene3D G3DSA:3.40.50.150 106 297 3.4E-46 T 01-11-2018 D3790_04275 62217fcde83b38e83a776b08bbe81154 311 Pfam PF05175 Methyltransferase small domain 133 216 2.1E-15 T 01-11-2018 IPR007848 Methyltransferase small domain GO:0008168 D3790_04275 62217fcde83b38e83a776b08bbe81154 311 PIRSF PIRSF037167 2 308 6.4E-139 T 01-11-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 D3790_04275 62217fcde83b38e83a776b08bbe81154 311 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 304 3.5E-95 T 01-11-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 D3790_04275 62217fcde83b38e83a776b08bbe81154 311 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D3790_04275 62217fcde83b38e83a776b08bbe81154 311 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 301 49.899 T 01-11-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 D3790_09400 17cd3674443b87d4b549d0839a98ec2f 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 221 371 3.9E-38 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 D3790_09400 17cd3674443b87d4b549d0839a98ec2f 383 PIRSF PIRSF016578 226 372 2.8E-6 T 01-11-2018 D3790_09400 17cd3674443b87d4b549d0839a98ec2f 383 PIRSF PIRSF016578 123 182 2.0 T 01-11-2018 D3790_09400 17cd3674443b87d4b549d0839a98ec2f 383 PIRSF PIRSF016578 5 107 1.3E-7 T 01-11-2018 D3790_09400 17cd3674443b87d4b549d0839a98ec2f 383 Gene3D G3DSA:1.20.140.10 221 368 1.4E-104 T 01-11-2018 D3790_09400 17cd3674443b87d4b549d0839a98ec2f 383 SUPERFAMILY SSF47203 220 375 1.93E-42 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 D3790_09400 17cd3674443b87d4b549d0839a98ec2f 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 121 133 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 D3790_09400 17cd3674443b87d4b549d0839a98ec2f 383 Gene3D G3DSA:2.40.110.10 118 220 1.4E-104 T 01-11-2018 D3790_09400 17cd3674443b87d4b549d0839a98ec2f 383 SUPERFAMILY SSF56645 6 227 3.8E-62 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 D3790_09400 17cd3674443b87d4b549d0839a98ec2f 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 115 8.6E-27 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 D3790_09400 17cd3674443b87d4b549d0839a98ec2f 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 119 209 6.9E-19 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 D3790_09400 17cd3674443b87d4b549d0839a98ec2f 383 Gene3D G3DSA:1.10.540.10 14 117 1.4E-104 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 D3790_18260 079c5401f63407d5f1dc3d10adf9e954 270 Gene3D G3DSA:3.40.50.720 1 270 1.2E-112 T 01-11-2018 D3790_18260 079c5401f63407d5f1dc3d10adf9e954 270 SUPERFAMILY SSF69572 4 260 1.31E-62 T 01-11-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 D3790_18260 079c5401f63407d5f1dc3d10adf9e954 270 Pfam PF00899 ThiF family 23 268 7.7E-38 T 01-11-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 D3790_16225 c23dd4d7ebb1403bc6a9e85687fde2f6 247 Gene3D G3DSA:1.10.3720.10 20 226 9.2E-45 T 01-11-2018 IPR035906 MetI-like superfamily D3790_16225 c23dd4d7ebb1403bc6a9e85687fde2f6 247 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 224 2.0E-19 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_16225 c23dd4d7ebb1403bc6a9e85687fde2f6 247 SUPERFAMILY SSF161098 21 212 5.23E-40 T 01-11-2018 IPR035906 MetI-like superfamily D3790_16225 c23dd4d7ebb1403bc6a9e85687fde2f6 247 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 114 1.4E-15 T 01-11-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 D3790_10210 7a62ffe96cf2a362c8826940b0a88542 382 Pfam PF04235 Protein of unknown function (DUF418) 221 379 7.0E-38 T 01-11-2018 IPR007349 Domain of unknown function DUF418 D3790_11000 a267137f17f44f6969ff43e4c9970b8c 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 141 3.0E-71 T 01-11-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 D3790_11000 a267137f17f44f6969ff43e4c9970b8c 152 SUPERFAMILY SSF89447 1 137 1.05E-45 T 01-11-2018 IPR037914 SpoVT-AbrB domain superfamily D3790_11000 a267137f17f44f6969ff43e4c9970b8c 152 Gene3D G3DSA:2.40.330.20 1 147 3.4E-43 T 01-11-2018 IPR038619 MraZ superfamily D3790_11000 a267137f17f44f6969ff43e4c9970b8c 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 151 1.2E-60 T 01-11-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 D3790_11000 a267137f17f44f6969ff43e4c9970b8c 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 1.1E-23 T 01-11-2018 IPR020603 MraZ domain D3790_11000 a267137f17f44f6969ff43e4c9970b8c 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 140 3.7E-20 T 01-11-2018 IPR020603 MraZ domain D3790_11000 a267137f17f44f6969ff43e4c9970b8c 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 56.216 T 01-11-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 D3790_11220 362bebea0d1cb4acb7c41acd9761bccc 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D3790_11220 362bebea0d1cb4acb7c41acd9761bccc 621 Pfam PF02779 Transketolase, pyrimidine binding domain 320 479 2.3E-37 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D3790_11220 362bebea0d1cb4acb7c41acd9761bccc 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 1.5E-28 T 01-11-2018 IPR033248 Transketolase, C-terminal domain D3790_11220 362bebea0d1cb4acb7c41acd9761bccc 621 SUPERFAMILY SSF52922 491 619 9.55E-34 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D3790_11220 362bebea0d1cb4acb7c41acd9761bccc 621 SUPERFAMILY SSF52518 9 381 8.76E-78 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_11220 362bebea0d1cb4acb7c41acd9761bccc 621 SUPERFAMILY SSF52518 317 504 4.91E-57 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold D3790_11220 362bebea0d1cb4acb7c41acd9761bccc 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 0.0 T 01-11-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D3790_11220 362bebea0d1cb4acb7c41acd9761bccc 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 2.3E-117 T 01-11-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D3790_11220 362bebea0d1cb4acb7c41acd9761bccc 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 01-11-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D3790_11220 362bebea0d1cb4acb7c41acd9761bccc 621 Gene3D G3DSA:3.40.50.970 317 489 6.0E-65 T 01-11-2018 D3790_11220 362bebea0d1cb4acb7c41acd9761bccc 621 Gene3D G3DSA:3.40.50.920 495 621 8.9E-44 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D3790_11220 362bebea0d1cb4acb7c41acd9761bccc 621 SMART SM00861 319 484 3.8E-66 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D3790_11220 362bebea0d1cb4acb7c41acd9761bccc 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 46.126 T 01-11-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D3790_19115 9a4931514539596f562a2616d9c08d05 215 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 24 203 5.5E-81 T 01-11-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 D3790_19115 9a4931514539596f562a2616d9c08d05 215 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 40 211 37.987 T 01-11-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 D3790_19115 9a4931514539596f562a2616d9c08d05 215 Gene3D G3DSA:3.40.50.300 18 215 4.9E-76 T 01-11-2018 D3790_19115 9a4931514539596f562a2616d9c08d05 215 Pfam PF01583 Adenylylsulphate kinase 43 193 3.5E-72 T 01-11-2018 D3790_19115 9a4931514539596f562a2616d9c08d05 215 SUPERFAMILY SSF52540 38 208 2.17E-36 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05540 56362147b8404a575dc0deb4a8c82a28 305 PIRSF PIRSF020419 13 305 7.5E-81 T 01-11-2018 IPR016773 Ferric uptake regulator, CjrA, predicted D3790_05540 56362147b8404a575dc0deb4a8c82a28 305 Gene3D G3DSA:3.40.50.11550 56 277 8.6E-74 T 01-11-2018 D3790_05540 56362147b8404a575dc0deb4a8c82a28 305 Gene3D G3DSA:1.10.8.760 176 232 8.6E-74 T 01-11-2018 D3790_05540 56362147b8404a575dc0deb4a8c82a28 305 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 68 264 1.2E-36 T 01-11-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN D3790_05540 56362147b8404a575dc0deb4a8c82a28 305 SUPERFAMILY SSF159501 49 297 2.3E-63 T 01-11-2018 D3790_11990 c25339617c998fe9785ad83ad8f9e1be 553 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 99 120 - T 01-11-2018 IPR023765 Solute-binding protein family 5, conserved site D3790_11990 c25339617c998fe9785ad83ad8f9e1be 553 SUPERFAMILY SSF53850 47 546 6.52E-140 T 01-11-2018 D3790_11990 c25339617c998fe9785ad83ad8f9e1be 553 Gene3D G3DSA:3.40.190.10 54 530 2.3E-174 T 01-11-2018 D3790_11990 c25339617c998fe9785ad83ad8f9e1be 553 Gene3D G3DSA:3.90.76.10 83 206 2.3E-174 T 01-11-2018 D3790_11990 c25339617c998fe9785ad83ad8f9e1be 553 Gene3D G3DSA:3.10.105.10 308 519 2.3E-174 T 01-11-2018 D3790_11990 c25339617c998fe9785ad83ad8f9e1be 553 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 474 1.5E-88 T 01-11-2018 IPR000914 Solute-binding protein family 5 domain D3790_11990 c25339617c998fe9785ad83ad8f9e1be 553 PIRSF PIRSF002741 7 550 2.6E-109 T 01-11-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 D3790_02110 cbc0b2731df5ec07bcfb6565e0093a25 276 SUPERFAMILY SSF161098 17 265 1.7E-57 T 01-11-2018 IPR035906 MetI-like superfamily D3790_02110 cbc0b2731df5ec07bcfb6565e0093a25 276 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 7 268 8.1E-109 T 01-11-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 D3790_02110 cbc0b2731df5ec07bcfb6565e0093a25 276 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 8 269 3.2E-111 T 01-11-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 D3790_02110 cbc0b2731df5ec07bcfb6565e0093a25 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 273 2.0E-34 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_02110 cbc0b2731df5ec07bcfb6565e0093a25 276 Gene3D G3DSA:1.10.3720.10 15 271 1.2E-68 T 01-11-2018 IPR035906 MetI-like superfamily D3790_08310 59672bac6c4cdf0667887f92306eba34 116 Gene3D G3DSA:1.10.3730.20 31 116 2.3E-7 T 01-11-2018 D3790_08310 59672bac6c4cdf0667887f92306eba34 116 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 3 116 27.969 T 01-11-2018 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE D3790_08310 59672bac6c4cdf0667887f92306eba34 116 Pfam PF00892 EamA-like transporter family 27 113 2.9E-9 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D3790_08310 59672bac6c4cdf0667887f92306eba34 116 SUPERFAMILY SSF103481 35 114 1.03E-12 T 01-11-2018 D3790_12990 b7895731ae9b4f457423c1faf2118a32 224 Gene3D G3DSA:3.20.20.70 16 220 7.8E-61 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_12990 b7895731ae9b4f457423c1faf2118a32 224 Pfam PF02581 Thiamine monophosphate synthase 30 198 2.7E-55 T 01-11-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 D3790_12990 b7895731ae9b4f457423c1faf2118a32 224 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 216 20.57 T 01-11-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 D3790_12990 b7895731ae9b4f457423c1faf2118a32 224 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 31 211 1.7E-56 T 01-11-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 D3790_12990 b7895731ae9b4f457423c1faf2118a32 224 SUPERFAMILY SSF51391 11 216 5.1E-64 T 01-11-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 D3790_16545 5977fed23c5a6609af9d838e51efcbe2 429 Gene3D G3DSA:2.120.10.30 235 427 1.6E-16 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like D3790_16545 5977fed23c5a6609af9d838e51efcbe2 429 SUPERFAMILY SSF82171 22 413 3.66E-19 T 01-11-2018 D3790_16545 5977fed23c5a6609af9d838e51efcbe2 429 Pfam PF12566 Protein of unknown function (DUF3748) 67 187 1.3E-56 T 01-11-2018 IPR022223 Protein of unknown function DUF3748 D3790_16545 5977fed23c5a6609af9d838e51efcbe2 429 Pfam PF07676 WD40-like Beta Propeller Repeat 397 423 0.15 T 01-11-2018 IPR011659 WD40-like Beta Propeller D3790_16585 da5b36a330994b2d160d982756cf399f 404 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 2.6E-186 T 01-11-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 D3790_16585 da5b36a330994b2d160d982756cf399f 404 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 2 397 24.656 T 01-11-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 D3790_16585 da5b36a330994b2d160d982756cf399f 404 Pfam PF03616 Sodium/glutamate symporter 2 366 4.1E-158 T 01-11-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 D3790_01785 f07e88965d86af55740f946556fbc383 153 Pfam PF03230 Antirestriction protein 42 131 2.6E-23 T 01-11-2018 IPR004914 Antirestriction protein D3790_01785 f07e88965d86af55740f946556fbc383 153 Gene3D G3DSA:1.10.472.120 21 132 6.0E-17 T 01-11-2018 D3790_15720 9e66c2fc3d8572280f5311c712abae61 95 PIRSF PIRSF030200 1 95 3.2E-40 T 01-11-2018 IPR009359 Phenylacetic acid degradation B D3790_15720 9e66c2fc3d8572280f5311c712abae61 95 Pfam PF06243 Phenylacetic acid degradation B 5 91 2.5E-38 T 01-11-2018 IPR009359 Phenylacetic acid degradation B D3790_15720 9e66c2fc3d8572280f5311c712abae61 95 Gene3D G3DSA:3.10.20.520 1 65 1.4E-29 T 01-11-2018 IPR038693 Phenylacetyl-CoA epoxidase, subunit B D3790_15720 9e66c2fc3d8572280f5311c712abae61 95 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 6 95 7.6E-45 T 01-11-2018 IPR009359 Phenylacetic acid degradation B D3790_14825 69fa5b067a21e84e7742995f0af72feb 350 Gene3D G3DSA:3.40.50.2000 1 151 4.4E-58 T 01-11-2018 D3790_14825 69fa5b067a21e84e7742995f0af72feb 350 Gene3D G3DSA:3.40.50.2000 164 349 7.1E-66 T 01-11-2018 D3790_14825 69fa5b067a21e84e7742995f0af72feb 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 324 1.2E-77 T 01-11-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 D3790_14825 69fa5b067a21e84e7742995f0af72feb 350 SUPERFAMILY SSF53756 1 345 1.88E-100 T 01-11-2018 D3790_14825 69fa5b067a21e84e7742995f0af72feb 350 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 344 1.3E-160 T 01-11-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 D3790_04310 69046ad53da071ed7e3829e42a1df43e 424 Pfam PF01979 Amidohydrolase family 72 402 1.3E-18 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 D3790_04310 69046ad53da071ed7e3829e42a1df43e 424 TIGRFAM TIGR01224 hutI: imidazolonepropionase 37 412 9.3E-142 T 01-11-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D3790_04310 69046ad53da071ed7e3829e42a1df43e 424 Gene3D G3DSA:2.30.40.10 29 410 8.6E-153 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D3790_04310 69046ad53da071ed7e3829e42a1df43e 424 SUPERFAMILY SSF51338 8 413 6.0E-27 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D3790_04310 69046ad53da071ed7e3829e42a1df43e 424 Hamap MF_00372 Imidazolonepropionase [hutI]. 9 413 39.56 T 01-11-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D3790_04310 69046ad53da071ed7e3829e42a1df43e 424 Gene3D G3DSA:3.20.20.140 75 373 8.6E-153 T 01-11-2018 D3790_04310 69046ad53da071ed7e3829e42a1df43e 424 SUPERFAMILY SSF51556 74 373 3.54E-78 T 01-11-2018 IPR032466 Metal-dependent hydrolase D3790_04065 a4d880d675d150af9aad42f06399544d 345 Pfam PF05598 Transposase domain (DUF772) 57 129 2.3E-19 T 01-11-2018 IPR008490 Transposase InsH, N-terminal D3790_04065 a4d880d675d150af9aad42f06399544d 345 Pfam PF01609 Transposase DDE domain 142 329 4.4E-26 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_09915 e262802206809bd1be6fce4f3d5a34f2 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 237 4.3E-104 T 01-11-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 D3790_09915 e262802206809bd1be6fce4f3d5a34f2 246 PIRSF PIRSF000371 2 47 5.0E-11 T 01-11-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 D3790_09915 e262802206809bd1be6fce4f3d5a34f2 246 PIRSF PIRSF000371 44 245 3.6E-42 T 01-11-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 D3790_09915 e262802206809bd1be6fce4f3d5a34f2 246 Pfam PF04055 Radical SAM superfamily 24 179 8.2E-30 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D3790_09915 e262802206809bd1be6fce4f3d5a34f2 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 01-11-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 D3790_09915 e262802206809bd1be6fce4f3d5a34f2 246 SUPERFAMILY SSF102114 23 214 2.94E-22 T 01-11-2018 D3790_09915 e262802206809bd1be6fce4f3d5a34f2 246 Pfam PF13353 4Fe-4S single cluster domain 16 147 4.3E-18 T 01-11-2018 D3790_09915 e262802206809bd1be6fce4f3d5a34f2 246 Gene3D G3DSA:3.20.20.70 2 246 1.0E-101 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_08230 0fb0a232865b0e47dd801696140e2f67 287 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 16 286 70.691 T 01-11-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein D3790_08230 0fb0a232865b0e47dd801696140e2f67 287 SUPERFAMILY SSF47454 187 244 8.89E-5 T 01-11-2018 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily GO:0003677|GO:0006355 D3790_08230 0fb0a232865b0e47dd801696140e2f67 287 Pfam PF03618 Kinase/pyrophosphorylase 19 277 3.3E-72 T 01-11-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 D3790_17560 ede2cb9ed67e73a7d529b4bdefe1b273 209 PIRSF PIRSF004649 1 209 8.8E-62 T 01-11-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC D3790_17560 ede2cb9ed67e73a7d529b4bdefe1b273 209 Gene3D G3DSA:3.10.450.710 21 201 2.4E-43 T 01-11-2018 D3790_17560 ede2cb9ed67e73a7d529b4bdefe1b273 209 Pfam PF05494 MlaC protein 30 196 5.0E-55 T 01-11-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC D3790_10185 8e7f333a1649d0244059516afae1c277 150 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 6 125 22.138 T 01-11-2018 IPR022957 Uncharacterised protein family UPF0299 D3790_10185 8e7f333a1649d0244059516afae1c277 150 Pfam PF03788 LrgA family 25 115 4.4E-29 T 01-11-2018 IPR005538 LrgA/CidA family GO:0016021 D3790_09720 f24677c85dbcc04366e2d8964a085c1c 52 Gene3D G3DSA:1.10.10.620 1 52 3.0E-27 T 01-11-2018 IPR023200 Ribosome modulation factor domain superfamily D3790_09720 f24677c85dbcc04366e2d8964a085c1c 52 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 52 4.0E-21 T 01-11-2018 IPR007040 Ribosome modulation factor D3790_09720 f24677c85dbcc04366e2d8964a085c1c 52 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 52 25.301 T 01-11-2018 IPR007040 Ribosome modulation factor D3790_09720 f24677c85dbcc04366e2d8964a085c1c 52 Pfam PF04957 Ribosome modulation factor 1 51 2.2E-27 T 01-11-2018 IPR007040 Ribosome modulation factor D3790_13515 6415b99e0eb416df86c4c9a4f5a4b078 109 Gene3D G3DSA:2.30.30.110 1 109 1.3E-31 T 01-11-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor D3790_13515 6415b99e0eb416df86c4c9a4f5a4b078 109 SUPERFAMILY SSF50118 1 103 1.9E-25 T 01-11-2018 D3790_13515 6415b99e0eb416df86c4c9a4f5a4b078 109 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 6 102 1.4E-15 T 01-11-2018 IPR003477 mRNA interferase PemK-like GO:0003677 D3790_03005 0f1b964929b08026c80074d39fcc570d 117 SUPERFAMILY SSF50104 2 115 8.52E-49 T 01-11-2018 IPR008991 Translation protein SH3-like domain superfamily D3790_03005 0f1b964929b08026c80074d39fcc570d 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_03005 0f1b964929b08026c80074d39fcc570d 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_03005 0f1b964929b08026c80074d39fcc570d 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_03005 0f1b964929b08026c80074d39fcc570d 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.129 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_03005 0f1b964929b08026c80074d39fcc570d 117 Pfam PF01245 Ribosomal protein L19 3 113 1.9E-50 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_03005 0f1b964929b08026c80074d39fcc570d 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 01-11-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_03005 0f1b964929b08026c80074d39fcc570d 117 Gene3D G3DSA:2.30.30.790 2 117 1.0E-17 T 01-11-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_03005 0f1b964929b08026c80074d39fcc570d 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 7.4E-54 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_03005 0f1b964929b08026c80074d39fcc570d 117 PIRSF PIRSF002191 1 117 1.5E-51 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_03885 2ed79daf34529520b2d6d44df0b0b1b4 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 35.853 T 01-11-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D3790_03885 2ed79daf34529520b2d6d44df0b0b1b4 159 Gene3D G3DSA:3.30.70.640 1 159 4.4E-70 T 01-11-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D3790_03885 2ed79daf34529520b2d6d44df0b0b1b4 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.1E-72 T 01-11-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D3790_03885 2ed79daf34529520b2d6d44df0b0b1b4 159 SUPERFAMILY SSF55040 11 155 8.63E-61 T 01-11-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D3790_03885 2ed79daf34529520b2d6d44df0b0b1b4 159 Pfam PF01967 MoaC family 15 150 5.3E-55 T 01-11-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D3790_00880 cd4f75121f1b5dff0a02733baaeb3453 70 Gene3D G3DSA:1.10.238.160 10 69 1.0E-6 T 01-11-2018 D3790_00880 cd4f75121f1b5dff0a02733baaeb3453 70 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 11 59 8.4E-19 T 01-11-2018 IPR010260 DNA-binding transcriptional activator AlpA D3790_02500 8183fd75bab8cabdc5ccf5f15cc11c81 94 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 82 7.3E-12 T 01-11-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family D3790_02500 8183fd75bab8cabdc5ccf5f15cc11c81 94 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 85 2.6E-7 T 01-11-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family D3790_02500 8183fd75bab8cabdc5ccf5f15cc11c81 94 Gene3D G3DSA:3.30.2310.20 1 93 3.9E-24 T 01-11-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D3790_02500 8183fd75bab8cabdc5ccf5f15cc11c81 94 SUPERFAMILY SSF143011 1 82 1.1E-20 T 01-11-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D3790_09680 f12183414f298062da75c93752cb1a4d 75 Gene3D G3DSA:3.40.50.450 5 71 2.2E-11 T 01-11-2018 D3790_18355 9b8aec3fc8594d7866f34384da821ac2 128 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 2.7E-53 T 01-11-2018 IPR020911 Uncharacterised protein family UPF0325 D3790_18355 9b8aec3fc8594d7866f34384da821ac2 128 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 30.917 T 01-11-2018 IPR020911 Uncharacterised protein family UPF0325 D3790_18355 9b8aec3fc8594d7866f34384da821ac2 128 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 1.0E-59 T 01-11-2018 IPR020911 Uncharacterised protein family UPF0325 D3790_13555 00fa7b6725874e373542cae2ae4ff5d3 105 Pfam PF00436 Single-strand binding protein family 4 82 1.0E-11 T 01-11-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 D3790_13555 00fa7b6725874e373542cae2ae4ff5d3 105 Gene3D G3DSA:2.40.50.140 1 105 1.5E-39 T 01-11-2018 D3790_13555 00fa7b6725874e373542cae2ae4ff5d3 105 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 4 100 1.6E-37 T 01-11-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 D3790_13555 00fa7b6725874e373542cae2ae4ff5d3 105 PIRSF PIRSF003135 1 102 5.5E-48 T 01-11-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 D3790_13555 00fa7b6725874e373542cae2ae4ff5d3 105 SUPERFAMILY SSF50249 2 104 2.06E-30 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_13555 00fa7b6725874e373542cae2ae4ff5d3 105 Hamap MF_00720 Primosomal replication protein N [priB]. 3 101 24.506 T 01-11-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 D3790_12755 de7557b50799ba4708cb9fd9b365cfeb 324 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 25 323 1.4E-122 T 01-11-2018 IPR004513 Cell division protein FtsX GO:0016021 D3790_12755 de7557b50799ba4708cb9fd9b365cfeb 324 PIRSF PIRSF003097 24 320 6.8E-92 T 01-11-2018 IPR004513 Cell division protein FtsX GO:0016021 D3790_12755 de7557b50799ba4708cb9fd9b365cfeb 324 Gene3D G3DSA:3.30.70.3040 69 180 6.3E-6 T 01-11-2018 D3790_05895 754aae19eb0cae1305d6500c1c0fa53d 98 Gene3D G3DSA:1.10.260.40 37 97 6.6E-16 T 01-11-2018 D3790_05895 754aae19eb0cae1305d6500c1c0fa53d 98 Pfam PF01381 Helix-turn-helix 39 80 4.3E-6 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_05895 754aae19eb0cae1305d6500c1c0fa53d 98 SUPERFAMILY SSF47413 38 85 7.51E-10 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_05895 754aae19eb0cae1305d6500c1c0fa53d 98 SMART SM00530 38 92 2.7E-5 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_09345 84f9c6353ad0c6daeab0fefee12d26c2 260 Pfam PF01311 Bacterial export proteins, family 1 15 247 7.7E-67 T 01-11-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 D3790_09345 84f9c6353ad0c6daeab0fefee12d26c2 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 254 7.5E-72 T 01-11-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 D3790_09345 84f9c6353ad0c6daeab0fefee12d26c2 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 7.5E-31 T 01-11-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 D3790_09345 84f9c6353ad0c6daeab0fefee12d26c2 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 7.5E-31 T 01-11-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 D3790_09345 84f9c6353ad0c6daeab0fefee12d26c2 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 7.5E-31 T 01-11-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 D3790_09345 84f9c6353ad0c6daeab0fefee12d26c2 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 7.5E-31 T 01-11-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 D3790_12855 1db3c50dc1b07584dbe7ae017752b477 131 Gene3D G3DSA:1.20.1300.10 2 131 1.0E-49 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_12855 1db3c50dc1b07584dbe7ae017752b477 131 SUPERFAMILY SSF81343 2 130 2.29E-55 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D3790_12855 1db3c50dc1b07584dbe7ae017752b477 131 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 8 111 4.0E-37 T 01-11-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 D3790_12855 1db3c50dc1b07584dbe7ae017752b477 131 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 28.422 T 01-11-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 D3790_12855 1db3c50dc1b07584dbe7ae017752b477 131 PIRSF PIRSF000180 2 130 9.0E-57 T 01-11-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 D3790_12855 1db3c50dc1b07584dbe7ae017752b477 131 Pfam PF02300 Fumarate reductase subunit C 3 128 3.3E-53 T 01-11-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 D3790_05360 9adbf17160a59f56dd8c1a02015a0f0f 265 Pfam PF08543 Phosphomethylpyrimidine kinase 12 259 3.9E-89 T 01-11-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 D3790_05360 9adbf17160a59f56dd8c1a02015a0f0f 265 SUPERFAMILY SSF53613 6 265 2.65E-73 T 01-11-2018 IPR029056 Ribokinase-like D3790_05360 9adbf17160a59f56dd8c1a02015a0f0f 265 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 261 1.2E-96 T 01-11-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 D3790_05360 9adbf17160a59f56dd8c1a02015a0f0f 265 Gene3D G3DSA:3.40.1190.20 2 265 1.1E-94 T 01-11-2018 IPR029056 Ribokinase-like D3790_15460 489083ddd5926b2661d4a683b3dc05c7 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 1.5E-258 T 01-11-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15460 489083ddd5926b2661d4a683b3dc05c7 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 01-11-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D3790_15460 489083ddd5926b2661d4a683b3dc05c7 513 Gene3D G3DSA:3.40.50.300 94 382 1.5E-130 T 01-11-2018 D3790_15460 489083ddd5926b2661d4a683b3dc05c7 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.19 T 01-11-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15460 489083ddd5926b2661d4a683b3dc05c7 513 Gene3D G3DSA:1.20.150.20 383 513 6.2E-48 T 01-11-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15460 489083ddd5926b2661d4a683b3dc05c7 513 SUPERFAMILY SSF50615 10 94 4.91E-26 T 01-11-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D3790_15460 489083ddd5926b2661d4a683b3dc05c7 513 SUPERFAMILY SSF52540 96 381 8.51E-94 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_15460 489083ddd5926b2661d4a683b3dc05c7 513 SUPERFAMILY SSF47917 383 511 8.11E-45 T 01-11-2018 D3790_15460 489083ddd5926b2661d4a683b3dc05c7 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 5.2E-44 T 01-11-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15460 489083ddd5926b2661d4a683b3dc05c7 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.4E-72 T 01-11-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D3790_15460 489083ddd5926b2661d4a683b3dc05c7 513 Gene3D G3DSA:2.40.30.20 1 93 9.3E-30 T 01-11-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D3790_15460 489083ddd5926b2661d4a683b3dc05c7 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 1.6E-13 T 01-11-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D3790_00595 40eefa0a5e868c488140248cd8be3c6e 65 Pfam PF01051 Initiator Replication protein 8 55 1.4E-12 T 01-11-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 D3790_00595 40eefa0a5e868c488140248cd8be3c6e 65 Gene3D G3DSA:1.10.10.10 2 64 2.7E-14 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_00595 40eefa0a5e868c488140248cd8be3c6e 65 SUPERFAMILY SSF46785 7 60 4.08E-13 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_17440 c2c37748d94b6338f1a6058fb8570d5d 62 Gene3D G3DSA:3.30.920.30 1 61 3.5E-18 T 01-11-2018 IPR038570 HicA superfamily D3790_17440 c2c37748d94b6338f1a6058fb8570d5d 62 SUPERFAMILY SSF54786 1 59 4.71E-13 T 01-11-2018 D3790_17440 c2c37748d94b6338f1a6058fb8570d5d 62 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 53 2.5E-13 T 01-11-2018 IPR012933 HicA mRNA interferase family GO:0003729 D3790_02395 8ed19b5f9084d95be4535f15ebbefdf3 1701 Pfam PF07678 A-macroglobulin complement component 1275 1334 6.9E-5 T 01-11-2018 IPR011626 Alpha-macroglobulin complement component GO:0005615 D3790_02395 8ed19b5f9084d95be4535f15ebbefdf3 1701 Pfam PF01835 MG2 domain 429 519 1.0E-18 T 01-11-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 D3790_02395 8ed19b5f9084d95be4535f15ebbefdf3 1701 Gene3D G3DSA:1.50.10.20 1220 1478 4.1E-25 T 01-11-2018 D3790_02395 8ed19b5f9084d95be4535f15ebbefdf3 1701 SMART SM01359 803 952 2.0E-34 T 01-11-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 D3790_02395 8ed19b5f9084d95be4535f15ebbefdf3 1701 Pfam PF00207 Alpha-2-macroglobulin family 1023 1099 1.3E-6 T 01-11-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 D3790_02395 8ed19b5f9084d95be4535f15ebbefdf3 1701 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 804 951 4.1E-15 T 01-11-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 D3790_02395 8ed19b5f9084d95be4535f15ebbefdf3 1701 SMART SM01360 1016 1105 1.1E-18 T 01-11-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 D3790_02395 8ed19b5f9084d95be4535f15ebbefdf3 1701 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1230 1248 9.7E-5 T 01-11-2018 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming D3790_02395 8ed19b5f9084d95be4535f15ebbefdf3 1701 PIRSF PIRSF038980 17 1701 0.0 T 01-11-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria D3790_02395 8ed19b5f9084d95be4535f15ebbefdf3 1701 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 330 423 9.5E-22 T 01-11-2018 D3790_02395 8ed19b5f9084d95be4535f15ebbefdf3 1701 SUPERFAMILY SSF48239 1225 1480 4.71E-37 T 01-11-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid D3790_17665 1e925fa3a72a93ed69f42a00d82dc4b5 215 Pfam PF11153 Protein of unknown function (DUF2931) 43 208 1.9E-34 T 01-11-2018 IPR021326 Protein of unknown function DUF2931 D3790_01750 c9cd36295ca26d994e8bf89cb7cd7c69 335 Pfam PF00589 Phage integrase family 157 315 8.4E-16 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D3790_01750 c9cd36295ca26d994e8bf89cb7cd7c69 335 SUPERFAMILY SSF56349 10 317 1.85E-37 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_01750 c9cd36295ca26d994e8bf89cb7cd7c69 335 Gene3D G3DSA:1.10.150.130 11 110 1.8E-8 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal D3790_01750 c9cd36295ca26d994e8bf89cb7cd7c69 335 Gene3D G3DSA:1.10.443.10 111 328 8.5E-25 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_01750 c9cd36295ca26d994e8bf89cb7cd7c69 335 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 16 92 1.7E-6 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 D3790_08585 7f3865fbb572bf63b8e7b5c3079934fb 126 Pfam PF13358 DDE superfamily endonuclease 5 99 1.0E-13 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_13940 c32bce96bcc4d6ee296462f5f3e477fb 108 SUPERFAMILY SSF52833 3 108 2.14E-39 T 01-11-2018 IPR036249 Thioredoxin-like superfamily D3790_13940 c32bce96bcc4d6ee296462f5f3e477fb 108 PIRSF PIRSF000077 2 108 1.1E-41 T 01-11-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 D3790_13940 c32bce96bcc4d6ee296462f5f3e477fb 108 PRINTS PR00421 Thioredoxin family signature 24 32 7.7E-10 T 01-11-2018 D3790_13940 c32bce96bcc4d6ee296462f5f3e477fb 108 PRINTS PR00421 Thioredoxin family signature 72 83 7.7E-10 T 01-11-2018 D3790_13940 c32bce96bcc4d6ee296462f5f3e477fb 108 PRINTS PR00421 Thioredoxin family signature 32 41 7.7E-10 T 01-11-2018 D3790_13940 c32bce96bcc4d6ee296462f5f3e477fb 108 Gene3D G3DSA:3.40.30.10 1 106 1.6E-34 T 01-11-2018 D3790_13940 c32bce96bcc4d6ee296462f5f3e477fb 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 106 2.5E-37 T 01-11-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 D3790_13940 c32bce96bcc4d6ee296462f5f3e477fb 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 01-11-2018 IPR017937 Thioredoxin, conserved site GO:0045454 D3790_13940 c32bce96bcc4d6ee296462f5f3e477fb 108 Pfam PF00085 Thioredoxin 5 105 2.0E-31 T 01-11-2018 IPR013766 Thioredoxin domain GO:0045454 D3790_14080 ae2afd5f013a48d910125fd95fcae7e5 189 Pfam PF01300 Telomere recombination 15 188 1.5E-43 T 01-11-2018 IPR006070 YrdC-like domain GO:0003725 D3790_14080 ae2afd5f013a48d910125fd95fcae7e5 189 Gene3D G3DSA:3.90.870.10 2 187 3.0E-64 T 01-11-2018 D3790_14080 ae2afd5f013a48d910125fd95fcae7e5 189 SUPERFAMILY SSF55821 5 186 1.28E-56 T 01-11-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily D3790_14080 ae2afd5f013a48d910125fd95fcae7e5 189 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 6 187 41.938 T 01-11-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 D3790_13905 797cabe5258e66f8d2fcad0a8f1fa225 356 SUPERFAMILY SSF51735 2 338 4.35E-97 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_13905 797cabe5258e66f8d2fcad0a8f1fa225 356 Gene3D G3DSA:3.90.25.10 202 334 2.0E-139 T 01-11-2018 D3790_13905 797cabe5258e66f8d2fcad0a8f1fa225 356 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 7.1E-101 T 01-11-2018 IPR016040 NAD(P)-binding domain D3790_13905 797cabe5258e66f8d2fcad0a8f1fa225 356 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 339 5.0E-159 T 01-11-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 D3790_13905 797cabe5258e66f8d2fcad0a8f1fa225 356 Gene3D G3DSA:3.40.50.720 3 326 2.0E-139 T 01-11-2018 D3790_14720 d9a523a872d1e79cc9ea2207a6376821 409 SUPERFAMILY SSF102645 190 405 1.44E-78 T 01-11-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 D3790_14720 d9a523a872d1e79cc9ea2207a6376821 409 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 10 399 4.6E-159 T 01-11-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 D3790_14720 d9a523a872d1e79cc9ea2207a6376821 409 Pfam PF02441 Flavoprotein 13 184 1.6E-43 T 01-11-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 D3790_14720 d9a523a872d1e79cc9ea2207a6376821 409 SUPERFAMILY SSF52507 8 186 6.41E-58 T 01-11-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 D3790_14720 d9a523a872d1e79cc9ea2207a6376821 409 Gene3D G3DSA:3.40.50.10300 192 409 3.7E-85 T 01-11-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 D3790_14720 d9a523a872d1e79cc9ea2207a6376821 409 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 192 374 1.2E-72 T 01-11-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 D3790_14720 d9a523a872d1e79cc9ea2207a6376821 409 Gene3D G3DSA:3.40.50.1950 5 191 1.2E-54 T 01-11-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 D3790_02345 1997382a8195a57e17b0c1c2bfce4f67 164 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 1.7E-66 T 01-11-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 D3790_02345 1997382a8195a57e17b0c1c2bfce4f67 164 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 4.7E-47 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type D3790_02345 1997382a8195a57e17b0c1c2bfce4f67 164 Pfam PF02082 Transcriptional regulator 1 83 2.7E-27 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type D3790_02345 1997382a8195a57e17b0c1c2bfce4f67 164 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 01-11-2018 IPR030489 Transcription regulator Rrf2-type, conserved site D3790_02345 1997382a8195a57e17b0c1c2bfce4f67 164 SUPERFAMILY SSF46785 2 133 3.08E-36 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_02345 1997382a8195a57e17b0c1c2bfce4f67 164 Gene3D G3DSA:1.10.10.10 1 144 5.3E-56 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_02345 1997382a8195a57e17b0c1c2bfce4f67 164 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 164 48.052 T 01-11-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 D3790_16375 23a6cd6e31bfa1541569146f9e74644c 295 Gene3D G3DSA:3.40.50.1820 2 292 1.0E-63 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_16375 23a6cd6e31bfa1541569146f9e74644c 295 Pfam PF00561 alpha/beta hydrolase fold 21 142 6.7E-18 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_16375 23a6cd6e31bfa1541569146f9e74644c 295 SUPERFAMILY SSF53474 3 291 7.9E-59 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_11970 b52ace026f216dfc9b9a392d6b48eb64 405 Pfam PF00149 Calcineurin-like phosphoesterase 1 233 3.6E-15 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 D3790_11970 b52ace026f216dfc9b9a392d6b48eb64 405 SUPERFAMILY SSF56300 1 342 3.8E-61 T 01-11-2018 D3790_11970 b52ace026f216dfc9b9a392d6b48eb64 405 Gene3D G3DSA:3.30.160.720 284 347 1.3E-25 T 01-11-2018 D3790_11970 b52ace026f216dfc9b9a392d6b48eb64 405 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 260 2.1E-75 T 01-11-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 D3790_11970 b52ace026f216dfc9b9a392d6b48eb64 405 Gene3D G3DSA:3.60.21.10 1 283 5.3E-91 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like D3790_11970 b52ace026f216dfc9b9a392d6b48eb64 405 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 282 379 8.6E-26 T 01-11-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain D3790_07135 08603dc444e7d1fba9cbc1196ab0f600 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 77 1.2E-19 T 01-11-2018 IPR025161 Putative transposase IS4/IS5 family D3790_07135 08603dc444e7d1fba9cbc1196ab0f600 253 Pfam PF01609 Transposase DDE domain 88 246 1.6E-21 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_09030 590f69baac6a9799a4c9db082e727413 405 PIRSF PIRSF016624 1 402 1.1E-79 T 01-11-2018 IPR012106 Protease, Mu phage/prophage I type D3790_09030 590f69baac6a9799a4c9db082e727413 405 Pfam PF10123 Mu-like prophage I protein 28 397 7.6E-88 T 01-11-2018 IPR012106 Protease, Mu phage/prophage I type D3790_06330 2a786e38e611118ad93852eaa504789a 117 Hamap MF_00680 UPF0263 protein YciU [yciU]. 13 117 30.813 T 01-11-2018 IPR007376 dsDNA mimic, putative D3790_06330 2a786e38e611118ad93852eaa504789a 117 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 15 117 1.0E-40 T 01-11-2018 IPR007376 dsDNA mimic, putative D3790_06330 2a786e38e611118ad93852eaa504789a 117 Pfam PF04269 Protein of unknown function, DUF440 16 117 4.2E-45 T 01-11-2018 IPR007376 dsDNA mimic, putative D3790_06330 2a786e38e611118ad93852eaa504789a 117 PIRSF PIRSF004916 9 117 1.7E-50 T 01-11-2018 IPR007376 dsDNA mimic, putative D3790_06330 2a786e38e611118ad93852eaa504789a 117 SUPERFAMILY SSF102816 11 117 1.28E-45 T 01-11-2018 IPR036763 Putative dsDNA mimic superfamily D3790_06330 2a786e38e611118ad93852eaa504789a 117 Gene3D G3DSA:3.10.450.140 17 117 3.0E-37 T 01-11-2018 IPR036763 Putative dsDNA mimic superfamily D3790_19020 3e1382a2c01fe840268ab8b0ba07a624 203 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 1.1E-14 T 01-11-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal D3790_19020 3e1382a2c01fe840268ab8b0ba07a624 203 SUPERFAMILY SSF54980 136 200 4.32E-15 T 01-11-2018 IPR035647 EF-G domain III/V-like D3790_19020 3e1382a2c01fe840268ab8b0ba07a624 203 Gene3D G3DSA:3.30.70.240 135 202 4.5E-26 T 01-11-2018 D3790_19020 3e1382a2c01fe840268ab8b0ba07a624 203 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 199 2.3E-74 T 01-11-2018 IPR015796 Impact family, bacterial/archaeal D3790_19020 3e1382a2c01fe840268ab8b0ba07a624 203 Gene3D G3DSA:3.30.230.30 1 133 3.6E-50 T 01-11-2018 IPR036956 Impact, N-terminal domain superfamily D3790_19020 3e1382a2c01fe840268ab8b0ba07a624 203 SUPERFAMILY SSF54211 2 130 2.73E-41 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_19020 3e1382a2c01fe840268ab8b0ba07a624 203 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 2.5E-25 T 01-11-2018 IPR001498 Impact, N-terminal D3790_06055 fff52155af32762848c0bbd9e7877be8 206 Pfam PF12059 Protein of unknown function (DUF3540) 28 206 3.1E-58 T 01-11-2018 IPR021927 Protein of unknown function DUF3540 D3790_13915 d391839c49f71992231a31c9d585bb54 376 SUPERFAMILY SSF53756 2 371 6.91E-142 T 01-11-2018 D3790_13915 d391839c49f71992231a31c9d585bb54 376 Gene3D G3DSA:3.40.50.2000 2 367 3.5E-153 T 01-11-2018 D3790_13915 d391839c49f71992231a31c9d585bb54 376 Gene3D G3DSA:3.40.50.2000 187 356 3.5E-153 T 01-11-2018 D3790_13915 d391839c49f71992231a31c9d585bb54 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 2.4E-170 T 01-11-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 D3790_13915 d391839c49f71992231a31c9d585bb54 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 2.9E-126 T 01-11-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 D3790_13915 d391839c49f71992231a31c9d585bb54 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 67.29 T 01-11-2018 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 D3790_16050 32db04abc7b173c96e16acc9ba47dbd5 466 Pfam PF06812 ImpA, N-terminal, type VI secretion system 13 111 8.9E-19 T 01-11-2018 IPR010657 ImpA, N-terminal D3790_16050 32db04abc7b173c96e16acc9ba47dbd5 466 Pfam PF12486 Type VI secretion system, EvfB, or VasL 291 437 8.8E-56 T 01-11-2018 IPR021069 ImpA, C-terminal D3790_14655 be9972071ef01e5933626375a41254e6 170 Pfam PF10554 Ash protein family 14 119 4.6E-22 T 01-11-2018 IPR018880 Bacteriophage P4, Ash protein D3790_00185 50dcb8429f9264ae9ca07a915790a5f1 171 Pfam PF05947 Type VI secretion system, TssF 11 162 6.0E-12 T 01-11-2018 IPR010272 Type VI secretion system, TssF-like D3790_00365 996a0b4ee2a8b3ba3e626054fd571816 107 SUPERFAMILY SSF160424 4 107 4.97E-19 T 01-11-2018 IPR036170 Probable antitoxin YezG superfamily D3790_09880 f685758e924fddd1d893397ed2b751fb 428 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 01-11-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 D3790_09880 f685758e924fddd1d893397ed2b751fb 428 PIRSF PIRSF000505 1 428 3.6E-155 T 01-11-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 D3790_09880 f685758e924fddd1d893397ed2b751fb 428 Gene3D G3DSA:3.65.10.10 20 223 3.5E-155 T 01-11-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 D3790_09880 f685758e924fddd1d893397ed2b751fb 428 Gene3D G3DSA:3.65.10.10 241 420 3.5E-155 T 01-11-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 D3790_09880 f685758e924fddd1d893397ed2b751fb 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.765 T 01-11-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 D3790_09880 f685758e924fddd1d893397ed2b751fb 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 3.3E-154 T 01-11-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 D3790_09880 f685758e924fddd1d893397ed2b751fb 428 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 01-11-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 D3790_09880 f685758e924fddd1d893397ed2b751fb 428 SUPERFAMILY SSF55205 1 423 3.43E-141 T 01-11-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 D3790_09880 f685758e924fddd1d893397ed2b751fb 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 5.0E-140 T 01-11-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 D3790_13000 4cd7554e1e978a9919e04ac73c185095 66 Gene3D G3DSA:3.10.20.30 1 66 9.2E-24 T 01-11-2018 IPR012675 Beta-grasp domain superfamily D3790_13000 4cd7554e1e978a9919e04ac73c185095 66 SUPERFAMILY SSF54285 1 66 8.43E-18 T 01-11-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp D3790_13000 4cd7554e1e978a9919e04ac73c185095 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 1.2E-20 T 01-11-2018 IPR010035 ThiS, thiamine-biosynthesis D3790_13000 4cd7554e1e978a9919e04ac73c185095 66 Pfam PF02597 ThiS family 7 66 7.6E-14 T 01-11-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 D3790_09755 6cca64ab1c8850aeec6cc7fe61f9afb8 183 PIRSF PIRSF010252 1 180 1.1E-58 T 01-11-2018 IPR009809 Cell division protein ZapC D3790_09755 6cca64ab1c8850aeec6cc7fe61f9afb8 183 Pfam PF07126 Cell-division protein ZapC 3 170 1.3E-65 T 01-11-2018 IPR009809 Cell division protein ZapC D3790_09755 6cca64ab1c8850aeec6cc7fe61f9afb8 183 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 180 38.526 T 01-11-2018 IPR009809 Cell division protein ZapC D3790_07715 945f8becd7c5a50400bc6f23a9b8d195 473 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 8.7E-12 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_07715 945f8becd7c5a50400bc6f23a9b8d195 473 SUPERFAMILY SSF46785 1 68 2.05E-16 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_07715 945f8becd7c5a50400bc6f23a9b8d195 473 Pfam PF00155 Aminotransferase class I and II 147 445 2.8E-24 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D3790_07715 945f8becd7c5a50400bc6f23a9b8d195 473 Gene3D G3DSA:3.40.640.10 141 360 1.2E-96 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_07715 945f8becd7c5a50400bc6f23a9b8d195 473 SMART SM00345 7 66 5.5E-11 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_07715 945f8becd7c5a50400bc6f23a9b8d195 473 SUPERFAMILY SSF53383 95 465 7.13E-88 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_07715 945f8becd7c5a50400bc6f23a9b8d195 473 Gene3D G3DSA:3.90.1150.10 98 464 1.2E-96 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_07715 945f8becd7c5a50400bc6f23a9b8d195 473 Gene3D G3DSA:1.10.10.10 1 68 5.7E-17 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_12930 2984496c87dc42c00d19822b2c8d7d83 233 Pfam PF07356 Protein of unknown function (DUF1481) 39 229 3.3E-71 T 01-11-2018 IPR010858 Protein of unknown function DUF1481 D3790_14475 4b0c054839595248a6769a90b4279b2b 92 PIRSF PIRSF003108 1 87 7.6E-33 T 01-11-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 D3790_14475 4b0c054839595248a6769a90b4279b2b 92 Pfam PF04221 RelB antitoxin 4 83 2.0E-28 T 01-11-2018 IPR007337 RelB antitoxin/Antitoxin DinJ D3790_14475 4b0c054839595248a6769a90b4279b2b 92 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 84 4.3E-24 T 01-11-2018 IPR007337 RelB antitoxin/Antitoxin DinJ D3790_14475 4b0c054839595248a6769a90b4279b2b 92 Gene3D G3DSA:1.10.1220.10 4 80 4.1E-16 T 01-11-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 D3790_08555 15648dd97f2f750c0696d4463e297e92 206 Pfam PF02659 Putative manganese efflux pump 43 195 6.9E-55 T 01-11-2018 IPR003810 Putative manganese efflux pump D3790_08555 15648dd97f2f750c0696d4463e297e92 206 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 13 198 25.832 T 01-11-2018 IPR022929 Putative manganese efflux pump MntP D3790_18170 b975f1b4c12474944c52d7ad2b0110c4 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 01-11-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D3790_18170 b975f1b4c12474944c52d7ad2b0110c4 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 39.423 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D3790_18170 b975f1b4c12474944c52d7ad2b0110c4 264 SUPERFAMILY SSF55831 1 264 7.07E-130 T 01-11-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D3790_18170 b975f1b4c12474944c52d7ad2b0110c4 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 5.6E-46 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D3790_18170 b975f1b4c12474944c52d7ad2b0110c4 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 5.6E-46 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D3790_18170 b975f1b4c12474944c52d7ad2b0110c4 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 5.6E-46 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D3790_18170 b975f1b4c12474944c52d7ad2b0110c4 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 5.6E-46 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D3790_18170 b975f1b4c12474944c52d7ad2b0110c4 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 5.6E-46 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D3790_18170 b975f1b4c12474944c52d7ad2b0110c4 264 Gene3D G3DSA:3.30.572.10 1 264 8.8E-134 T 01-11-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D3790_18170 b975f1b4c12474944c52d7ad2b0110c4 264 Pfam PF00303 Thymidylate synthase 2 264 1.0E-124 T 01-11-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D3790_18170 b975f1b4c12474944c52d7ad2b0110c4 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 7.0E-42 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D3790_18170 b975f1b4c12474944c52d7ad2b0110c4 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 4.8E-92 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D3790_10950 35c491324d6165d4c06d24ce3283d83d 491 SUPERFAMILY SSF53623 105 322 4.19E-72 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D3790_10950 35c491324d6165d4c06d24ce3283d83d 491 Pfam PF08245 Mur ligase middle domain 124 304 6.4E-26 T 01-11-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 D3790_10950 35c491324d6165d4c06d24ce3283d83d 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 418 1.9E-21 T 01-11-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 D3790_10950 35c491324d6165d4c06d24ce3283d83d 491 SUPERFAMILY SSF51984 20 106 1.96E-29 T 01-11-2018 D3790_10950 35c491324d6165d4c06d24ce3283d83d 491 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.236 T 01-11-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D3790_10950 35c491324d6165d4c06d24ce3283d83d 491 Gene3D G3DSA:3.90.190.20 322 491 1.5E-50 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D3790_10950 35c491324d6165d4c06d24ce3283d83d 491 Gene3D G3DSA:3.40.50.720 20 107 3.1E-33 T 01-11-2018 D3790_10950 35c491324d6165d4c06d24ce3283d83d 491 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 4.5E-182 T 01-11-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D3790_10950 35c491324d6165d4c06d24ce3283d83d 491 Pfam PF01225 Mur ligase family, catalytic domain 21 119 2.8E-30 T 01-11-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 D3790_10950 35c491324d6165d4c06d24ce3283d83d 491 Gene3D G3DSA:3.40.1190.10 108 321 4.5E-84 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D3790_10950 35c491324d6165d4c06d24ce3283d83d 491 SUPERFAMILY SSF53244 323 476 1.43E-46 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D3790_02935 b232ed9036c6f301f49b482c03d51294 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 01-11-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 D3790_02935 b232ed9036c6f301f49b482c03d51294 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 01-11-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 D3790_02935 b232ed9036c6f301f49b482c03d51294 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 1.3E-31 T 01-11-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 D3790_02935 b232ed9036c6f301f49b482c03d51294 61 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 59 17.134 T 01-11-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 D3790_02935 b232ed9036c6f301f49b482c03d51294 61 Gene3D G3DSA:3.30.70.1680 1 61 1.3E-31 T 01-11-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 D3790_02935 b232ed9036c6f301f49b482c03d51294 61 Pfam PF02599 Global regulator protein family 1 52 2.5E-27 T 01-11-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 D3790_18810 1fb875898ec077df2186081a429f7f9d 171 Pfam PF00436 Single-strand binding protein family 6 112 6.0E-44 T 01-11-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 D3790_18810 1fb875898ec077df2186081a429f7f9d 171 PIRSF PIRSF002070 2 160 1.4E-40 T 01-11-2018 D3790_18810 1fb875898ec077df2186081a429f7f9d 171 Gene3D G3DSA:2.40.50.140 2 145 8.3E-53 T 01-11-2018 D3790_18810 1fb875898ec077df2186081a429f7f9d 171 SUPERFAMILY SSF50249 4 171 9.25E-64 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_18810 1fb875898ec077df2186081a429f7f9d 171 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 171 3.5E-62 T 01-11-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D3790_18810 1fb875898ec077df2186081a429f7f9d 171 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 40.661 T 01-11-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D3790_11890 da0d202d2a1b611c4c64eec924a67325 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.768 T 01-11-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D3790_11890 da0d202d2a1b611c4c64eec924a67325 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 5.9E-57 T 01-11-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D3790_11890 da0d202d2a1b611c4c64eec924a67325 156 Gene3D G3DSA:3.40.50.960 1 156 9.8E-65 T 01-11-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D3790_11890 da0d202d2a1b611c4c64eec924a67325 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 6.9E-59 T 01-11-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D3790_11890 da0d202d2a1b611c4c64eec924a67325 156 SUPERFAMILY SSF52121 3 154 1.44E-60 T 01-11-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D3790_03210 16f14df1052f8b01fc1fc7b85783aed6 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.935 T 01-11-2018 IPR007454 Uncharacterised protein family UPF0250 D3790_03210 16f14df1052f8b01fc1fc7b85783aed6 87 Gene3D G3DSA:3.30.70.260 1 87 3.9E-34 T 01-11-2018 D3790_03210 16f14df1052f8b01fc1fc7b85783aed6 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 3.8E-29 T 01-11-2018 IPR007454 Uncharacterised protein family UPF0250 D3790_03210 16f14df1052f8b01fc1fc7b85783aed6 87 SUPERFAMILY SSF117991 1 87 8.63E-31 T 01-11-2018 IPR027471 YbeD-like domain superfamily D3790_15385 e6ead86b465299f42bba7aa7e2362570 314 Pfam PF00294 pfkB family carbohydrate kinase 3 297 7.4E-78 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB D3790_15385 e6ead86b465299f42bba7aa7e2362570 314 SUPERFAMILY SSF53613 3 305 7.33E-86 T 01-11-2018 IPR029056 Ribokinase-like D3790_15385 e6ead86b465299f42bba7aa7e2362570 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 01-11-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 D3790_15385 e6ead86b465299f42bba7aa7e2362570 314 Hamap MF_01987 Ribokinase [rbsK]. 4 304 26.2 T 01-11-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 D3790_15385 e6ead86b465299f42bba7aa7e2362570 314 PRINTS PR00990 Ribokinase signature 107 120 7.8E-38 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 D3790_15385 e6ead86b465299f42bba7aa7e2362570 314 PRINTS PR00990 Ribokinase signature 35 54 7.8E-38 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 D3790_15385 e6ead86b465299f42bba7aa7e2362570 314 PRINTS PR00990 Ribokinase signature 8 29 7.8E-38 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 D3790_15385 e6ead86b465299f42bba7aa7e2362570 314 PRINTS PR00990 Ribokinase signature 219 230 7.8E-38 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 D3790_15385 e6ead86b465299f42bba7aa7e2362570 314 PRINTS PR00990 Ribokinase signature 175 190 7.8E-38 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 D3790_15385 e6ead86b465299f42bba7aa7e2362570 314 Gene3D G3DSA:3.40.1190.20 1 310 1.1E-103 T 01-11-2018 IPR029056 Ribokinase-like D3790_15385 e6ead86b465299f42bba7aa7e2362570 314 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 7 302 8.6E-111 T 01-11-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 D3790_03255 2f879b62933631cc92575facd65b5e84 194 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 18 176 25.285 T 01-11-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 D3790_03255 2f879b62933631cc92575facd65b5e84 194 Gene3D G3DSA:3.30.160.150 29 181 7.6E-56 T 01-11-2018 D3790_03255 2f879b62933631cc92575facd65b5e84 194 Pfam PF04390 Lipopolysaccharide-assembly 48 171 4.5E-13 T 01-11-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 D3790_02185 21721bd39e7568b5c3f3266d6bf302af 226 SUPERFAMILY SSF52141 4 221 3.71E-95 T 01-11-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D3790_02185 21721bd39e7568b5c3f3266d6bf302af 226 SMART SM00986 49 210 6.1E-41 T 01-11-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D3790_02185 21721bd39e7568b5c3f3266d6bf302af 226 SMART SM00987 49 210 6.1E-41 T 01-11-2018 D3790_02185 21721bd39e7568b5c3f3266d6bf302af 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.216 T 01-11-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D3790_02185 21721bd39e7568b5c3f3266d6bf302af 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 4.5E-88 T 01-11-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D3790_02185 21721bd39e7568b5c3f3266d6bf302af 226 Gene3D G3DSA:3.40.470.10 2 226 6.6E-104 T 01-11-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D3790_02185 21721bd39e7568b5c3f3266d6bf302af 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 01-11-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D3790_02185 21721bd39e7568b5c3f3266d6bf302af 226 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 4.4E-26 T 01-11-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D3790_07545 bb8d753aeb8869076e013f7bea84eaa9 285 Gene3D G3DSA:2.40.70.10 36 167 2.0E-7 T 01-11-2018 IPR021109 Aspartic peptidase domain superfamily D3790_01040 c471413665eed103923bfecaf43bbdf9 121 Pfam PF03734 L,D-transpeptidase catalytic domain 4 75 4.2E-5 T 01-11-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 D3790_01040 c471413665eed103923bfecaf43bbdf9 121 SUPERFAMILY SSF141523 3 74 1.57E-7 T 01-11-2018 IPR038063 L,D-transpeptidase catalytic domain-like D3790_02090 f142d6dc7440dc49da06b9ade8ad7f8b 293 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 281 1.0E-68 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D3790_02090 f142d6dc7440dc49da06b9ade8ad7f8b 293 SUPERFAMILY SSF53686 5 291 1.31E-90 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D3790_02090 f142d6dc7440dc49da06b9ade8ad7f8b 293 Gene3D G3DSA:3.40.50.1100 35 140 2.4E-110 T 01-11-2018 D3790_02090 f142d6dc7440dc49da06b9ade8ad7f8b 293 TIGRFAM TIGR01136 cysKM: cysteine synthase 6 292 2.9E-122 T 01-11-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 D3790_02090 f142d6dc7440dc49da06b9ade8ad7f8b 293 Gene3D G3DSA:3.40.50.1100 8 288 2.4E-110 T 01-11-2018 D3790_02090 f142d6dc7440dc49da06b9ade8ad7f8b 293 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 01-11-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 D3790_02090 f142d6dc7440dc49da06b9ade8ad7f8b 293 TIGRFAM TIGR01138 cysM: cysteine synthase B 4 292 6.5E-147 T 01-11-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 D3790_05195 0db190a12a33d52b30984db9201f3f16 285 Hamap MF_01604 Thiamine kinase [thiK]. 8 282 40.857 T 01-11-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 D3790_05195 0db190a12a33d52b30984db9201f3f16 285 SUPERFAMILY SSF56112 9 267 2.62E-35 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily D3790_05195 0db190a12a33d52b30984db9201f3f16 285 Pfam PF01633 Choline/ethanolamine kinase 57 224 3.8E-14 T 01-11-2018 D3790_05195 0db190a12a33d52b30984db9201f3f16 285 Gene3D G3DSA:3.90.1200.10 102 282 1.7E-18 T 01-11-2018 D3790_03045 3c4e97f3f78ae4283e1cc7fbb012df6b 243 Gene3D G3DSA:3.60.140.10 1 242 8.2E-96 T 01-11-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily D3790_03045 3c4e97f3f78ae4283e1cc7fbb012df6b 243 SUPERFAMILY SSF64438 3 242 7.51E-87 T 01-11-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic D3790_03045 3c4e97f3f78ae4283e1cc7fbb012df6b 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 26 242 1.4E-71 T 01-11-2018 IPR003730 Multi-copper polyphenol oxidoreductase D3790_03045 3c4e97f3f78ae4283e1cc7fbb012df6b 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 8.6E-77 T 01-11-2018 IPR003730 Multi-copper polyphenol oxidoreductase D3790_16250 e8fd2511f1171267c9bd4ea04068b5b2 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 296 3.4E-31 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_16250 e8fd2511f1171267c9bd4ea04068b5b2 301 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 34 300 4.3E-86 T 01-11-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 D3790_16250 e8fd2511f1171267c9bd4ea04068b5b2 301 SUPERFAMILY SSF161098 43 288 2.75E-33 T 01-11-2018 IPR035906 MetI-like superfamily D3790_16250 e8fd2511f1171267c9bd4ea04068b5b2 301 Gene3D G3DSA:1.10.3720.10 83 300 1.2E-28 T 01-11-2018 IPR035906 MetI-like superfamily D3790_09370 4c395a2729f309a5b3bf537681357a6f 857 SUPERFAMILY SSF56801 237 775 1.31E-112 T 01-11-2018 D3790_09370 4c395a2729f309a5b3bf537681357a6f 857 Gene3D G3DSA:3.40.50.12780 231 637 1.1E-101 T 01-11-2018 D3790_09370 4c395a2729f309a5b3bf537681357a6f 857 SUPERFAMILY SSF47336 759 829 1.96E-14 T 01-11-2018 IPR036736 ACP-like superfamily D3790_09370 4c395a2729f309a5b3bf537681357a6f 857 Pfam PF00501 AMP-binding enzyme 244 642 1.2E-78 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_09370 4c395a2729f309a5b3bf537681357a6f 857 Gene3D G3DSA:3.30.300.30 638 751 1.1E-22 T 01-11-2018 D3790_09370 4c395a2729f309a5b3bf537681357a6f 857 Pfam PF00550 Phosphopantetheine attachment site 765 829 1.5E-13 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_09370 4c395a2729f309a5b3bf537681357a6f 857 Gene3D G3DSA:1.10.1200.10 755 828 5.1E-15 T 01-11-2018 IPR036736 ACP-like superfamily D3790_09370 4c395a2729f309a5b3bf537681357a6f 857 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 266 655 3.6E-101 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_09370 4c395a2729f309a5b3bf537681357a6f 857 ProSitePatterns PS00455 Putative AMP-binding domain signature. 382 393 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_09775 52882ad7961480b95d88213f3e7de3e8 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 2.6E-206 T 01-11-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 D3790_09775 52882ad7961480b95d88213f3e7de3e8 466 Gene3D G3DSA:3.30.930.10 109 465 3.9E-110 T 01-11-2018 D3790_09775 52882ad7961480b95d88213f3e7de3e8 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 4.2E-11 T 01-11-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 D3790_09775 52882ad7961480b95d88213f3e7de3e8 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.512 T 01-11-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 D3790_09775 52882ad7961480b95d88213f3e7de3e8 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 1.0E-13 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_09775 52882ad7961480b95d88213f3e7de3e8 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 1.0E-13 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_09775 52882ad7961480b95d88213f3e7de3e8 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 1.0E-13 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_09775 52882ad7961480b95d88213f3e7de3e8 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.0E-13 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_09775 52882ad7961480b95d88213f3e7de3e8 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 5.0E-83 T 01-11-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D3790_09775 52882ad7961480b95d88213f3e7de3e8 466 SUPERFAMILY SSF50249 16 101 5.14E-17 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold D3790_09775 52882ad7961480b95d88213f3e7de3e8 466 Gene3D G3DSA:2.40.50.140 3 105 1.2E-19 T 01-11-2018 D3790_09775 52882ad7961480b95d88213f3e7de3e8 466 SUPERFAMILY SSF55681 98 464 8.56E-97 T 01-11-2018 D3790_12410 d0e2e910e83fc73d0ebdbfead294fbf6 88 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 2.1E-38 T 01-11-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain D3790_12410 d0e2e910e83fc73d0ebdbfead294fbf6 88 SUPERFAMILY SSF47413 2 72 4.5E-31 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_12410 d0e2e910e83fc73d0ebdbfead294fbf6 88 Gene3D G3DSA:1.10.260.40 1 72 7.2E-34 T 01-11-2018 D3790_04230 8d67e930893124b289abc943c66f690d 323 Gene3D G3DSA:3.40.190.10 122 249 8.6E-48 T 01-11-2018 D3790_04230 8d67e930893124b289abc943c66f690d 323 Gene3D G3DSA:3.40.190.150 26 314 8.6E-48 T 01-11-2018 D3790_04230 8d67e930893124b289abc943c66f690d 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 108 248 5.5E-19 T 01-11-2018 IPR005064 Bordetella uptake gene GO:0030288 D3790_04230 8d67e930893124b289abc943c66f690d 323 SUPERFAMILY SSF53850 93 228 2.58E-9 T 01-11-2018 D3790_04230 8d67e930893124b289abc943c66f690d 323 PIRSF PIRSF017082 3 323 6.6E-73 T 01-11-2018 IPR005064 Bordetella uptake gene GO:0030288 D3790_08105 1016a7c952e573efbc9955d5a6ca8e07 217 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 5 217 1.1E-89 T 01-11-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D3790_08105 1016a7c952e573efbc9955d5a6ca8e07 217 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 15 217 36.912 T 01-11-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D3790_08105 1016a7c952e573efbc9955d5a6ca8e07 217 SUPERFAMILY SSF50475 20 217 7.3E-66 T 01-11-2018 D3790_08105 1016a7c952e573efbc9955d5a6ca8e07 217 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 123 4.5E-23 T 01-11-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D3790_08105 1016a7c952e573efbc9955d5a6ca8e07 217 PIRSF PIRSF000190 2 217 7.6E-80 T 01-11-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D3790_08105 1016a7c952e573efbc9955d5a6ca8e07 217 Gene3D G3DSA:2.30.110.10 19 217 2.0E-76 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 D3790_08105 1016a7c952e573efbc9955d5a6ca8e07 217 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 177 217 3.9E-18 T 01-11-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D3790_08105 1016a7c952e573efbc9955d5a6ca8e07 217 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 187 200 - T 01-11-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D3790_01370 e4e889d99dcfee0d5eca06a8dcbf2efd 515 Gene3D G3DSA:3.30.300.30 415 515 1.4E-14 T 01-11-2018 D3790_01370 e4e889d99dcfee0d5eca06a8dcbf2efd 515 SUPERFAMILY SSF56801 24 513 6.02E-84 T 01-11-2018 D3790_01370 e4e889d99dcfee0d5eca06a8dcbf2efd 515 Pfam PF00501 AMP-binding enzyme 43 411 1.0E-45 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_01370 e4e889d99dcfee0d5eca06a8dcbf2efd 515 Gene3D G3DSA:3.40.50.12780 33 411 1.2E-67 T 01-11-2018 D3790_08575 02f9359ebd8f31937d592e6c825d5277 57 SUPERFAMILY SSF143011 1 53 2.55E-10 T 01-11-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D3790_08575 02f9359ebd8f31937d592e6c825d5277 57 Gene3D G3DSA:3.30.2310.20 1 56 3.1E-10 T 01-11-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D3790_01315 0543bbd203e21fd45cd34a6dce93cb79 158 Gene3D G3DSA:3.10.450.50 9 148 5.3E-41 T 01-11-2018 D3790_01315 0543bbd203e21fd45cd34a6dce93cb79 158 Pfam PF03284 Phenazine biosynthesis protein A/B 10 158 1.6E-72 T 01-11-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 D3790_01315 0543bbd203e21fd45cd34a6dce93cb79 158 SUPERFAMILY SSF54427 14 144 7.76E-22 T 01-11-2018 IPR032710 NTF2-like domain superfamily D3790_01315 0543bbd203e21fd45cd34a6dce93cb79 158 ProDom PD011053 BIOSYNTHESIS PHENAZINE PROBABLE PHZA PHZB ANTIBIOTIC VIRULENCE A/B EHPA PHZ1 12 158 2.0E-64 T 01-11-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 D3790_02430 bd5a2fd2bf07e71bc910f700aec3f5cb 341 Pfam PF13464 Domain of unknown function (DUF4115) 266 340 8.9E-19 T 01-11-2018 IPR025194 Domain of unknown function DUF4115 D3790_02430 bd5a2fd2bf07e71bc910f700aec3f5cb 341 Gene3D G3DSA:1.10.260.40 3 112 1.3E-20 T 01-11-2018 D3790_02430 bd5a2fd2bf07e71bc910f700aec3f5cb 341 SUPERFAMILY SSF47413 12 55 4.79E-6 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_02430 bd5a2fd2bf07e71bc910f700aec3f5cb 341 Pfam PF13413 Helix-turn-helix domain 18 77 7.2E-14 T 01-11-2018 D3790_15070 8d38ec8f9cc32b18edd7c3dde6b4d263 230 Gene3D G3DSA:3.40.50.2300 1 127 1.7E-41 T 01-11-2018 D3790_15070 8d38ec8f9cc32b18edd7c3dde6b4d263 230 Gene3D G3DSA:1.10.10.10 128 230 2.6E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_15070 8d38ec8f9cc32b18edd7c3dde6b4d263 230 Pfam PF00072 Response regulator receiver domain 4 112 8.2E-30 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_15070 8d38ec8f9cc32b18edd7c3dde6b4d263 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 226 2.9E-20 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D3790_15070 8d38ec8f9cc32b18edd7c3dde6b4d263 230 SMART SM00448 2 111 1.1E-46 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_15070 8d38ec8f9cc32b18edd7c3dde6b4d263 230 SUPERFAMILY SSF52172 1 186 1.02E-41 T 01-11-2018 IPR011006 CheY-like superfamily D3790_15070 8d38ec8f9cc32b18edd7c3dde6b4d263 230 SMART SM00862 150 226 1.1E-20 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D3790_11285 66ec5bb6c10801f635698068c36f283a 255 SUPERFAMILY SSF111364 26 255 3.01E-34 T 01-11-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 D3790_11285 66ec5bb6c10801f635698068c36f283a 255 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 34 255 3.8E-46 T 01-11-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 D3790_12880 fee12edbf555c82c09563996a017bbd2 255 SUPERFAMILY SSF88713 4 252 1.19E-97 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 D3790_12880 fee12edbf555c82c09563996a017bbd2 255 Gene3D G3DSA:3.20.20.370 3 254 1.8E-101 T 01-11-2018 D3790_12880 fee12edbf555c82c09563996a017bbd2 255 Pfam PF03746 LamB/YcsF family 5 242 4.3E-99 T 01-11-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 D3790_12880 fee12edbf555c82c09563996a017bbd2 255 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 3 247 44.42 T 01-11-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 D3790_01795 e238e1c05ac273835334ae26b0c92f9b 523 Pfam PF13007 Transposase C of IS166 homeodomain 46 120 4.4E-10 T 01-11-2018 IPR024463 Transposase TnpC, homeodomain D3790_01795 e238e1c05ac273835334ae26b0c92f9b 523 Pfam PF13817 IS66 C-terminal element 479 516 7.5E-15 T 01-11-2018 IPR039552 Transposase IS66, C-terminal D3790_01795 e238e1c05ac273835334ae26b0c92f9b 523 Pfam PF03050 Transposase IS66 family 187 472 5.4E-96 T 01-11-2018 IPR004291 Transposase, IS66 D3790_01795 e238e1c05ac273835334ae26b0c92f9b 523 Pfam PF13005 zinc-finger binding domain of transposase IS66 128 172 5.1E-14 T 01-11-2018 IPR024474 Zinc-finger binding domain of transposase IS66 D3790_13225 535d65d5e172473f8228ec238ad5b527 124 Gene3D G3DSA:2.30.30.110 9 120 1.7E-25 T 01-11-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor D3790_13225 535d65d5e172473f8228ec238ad5b527 124 SUPERFAMILY SSF50118 9 119 3.92E-19 T 01-11-2018 D3790_13225 535d65d5e172473f8228ec238ad5b527 124 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 10 118 1.7E-13 T 01-11-2018 IPR003477 mRNA interferase PemK-like GO:0003677 D3790_14850 26a958cc7cbab71556ca5dc9006e6313 437 Gene3D G3DSA:2.70.70.10 296 436 1.6E-38 T 01-11-2018 IPR011055 Duplicated hybrid motif D3790_14850 26a958cc7cbab71556ca5dc9006e6313 437 Pfam PF01551 Peptidase family M23 338 431 2.3E-26 T 01-11-2018 IPR016047 Peptidase M23 D3790_14850 26a958cc7cbab71556ca5dc9006e6313 437 SUPERFAMILY SSF51261 243 435 5.36E-48 T 01-11-2018 IPR011055 Duplicated hybrid motif D3790_05545 0a63b33318ac3d89c3226ad3570dc160 267 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 186 264 6.1E-14 T 01-11-2018 IPR037682 TonB, C-terminal GO:0055085 D3790_05545 0a63b33318ac3d89c3226ad3570dc160 267 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 187 264 2.9E-17 T 01-11-2018 IPR006260 TonB/TolA, C-terminal D3790_05545 0a63b33318ac3d89c3226ad3570dc160 267 SUPERFAMILY SSF74653 162 263 2.49E-17 T 01-11-2018 D3790_05545 0a63b33318ac3d89c3226ad3570dc160 267 Gene3D G3DSA:3.30.1150.10 104 266 2.9E-25 T 01-11-2018 D3790_13925 52d92df96a209648c214bada05acd0c8 362 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 28.732 T 01-11-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 D3790_13925 52d92df96a209648c214bada05acd0c8 362 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 8 350 1.9E-163 T 01-11-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 D3790_13925 52d92df96a209648c214bada05acd0c8 362 Pfam PF00953 Glycosyl transferase family 4 76 231 2.3E-27 T 01-11-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 D3790_19485 d27178cb1d116a946a82358c1ccde538 225 Gene3D G3DSA:3.30.379.10 12 156 2.4E-18 T 01-11-2018 IPR029018 Beta-hexosaminidase-like, domain 2 D3790_19485 d27178cb1d116a946a82358c1ccde538 225 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 29 150 6.3E-12 T 01-11-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal D3790_19485 d27178cb1d116a946a82358c1ccde538 225 SUPERFAMILY SSF55545 30 140 2.69E-20 T 01-11-2018 IPR029018 Beta-hexosaminidase-like, domain 2 D3790_17565 a1f71ae34bc9501f6910787b45c1aa41 107 Pfam PF13466 STAS domain 26 101 5.9E-13 T 01-11-2018 IPR002645 STAS domain D3790_17565 a1f71ae34bc9501f6910787b45c1aa41 107 Gene3D G3DSA:3.30.750.24 18 106 5.5E-7 T 01-11-2018 IPR036513 STAS domain superfamily D3790_17565 a1f71ae34bc9501f6910787b45c1aa41 107 SUPERFAMILY SSF52091 20 105 1.96E-11 T 01-11-2018 IPR036513 STAS domain superfamily D3790_03950 74e97c430351295f965d96c7dc6042a4 117 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 30 80 2.7E-20 T 01-11-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 D3790_06785 a00c1022d40465d1695c975c3215ece4 242 Gene3D G3DSA:3.40.50.880 1 236 9.8E-56 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_06785 a00c1022d40465d1695c975c3215ece4 242 SUPERFAMILY SSF52317 14 186 9.17E-33 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_06785 a00c1022d40465d1695c975c3215ece4 242 Pfam PF00117 Glutamine amidotransferase class-I 42 184 2.5E-13 T 01-11-2018 IPR017926 Glutamine amidotransferase D3790_05460 5ba1b47c65877a3933b8ef03fa16afc0 355 Pfam PF01594 AI-2E family transporter 19 345 3.9E-75 T 01-11-2018 IPR002549 Transmembrane protein TqsA-like D3790_07760 90249265d0bea8951b220df673d71bb4 142 PIRSF PIRSF006276 1 142 1.3E-19 T 01-11-2018 IPR006015 Universal stress protein A D3790_07760 90249265d0bea8951b220df673d71bb4 142 Pfam PF00582 Universal stress protein family 1 142 6.5E-26 T 01-11-2018 IPR006016 UspA D3790_07760 90249265d0bea8951b220df673d71bb4 142 SUPERFAMILY SSF52402 1 142 5.19E-28 T 01-11-2018 D3790_07760 90249265d0bea8951b220df673d71bb4 142 PRINTS PR01438 Universal stress protein signature 2 20 2.8E-12 T 01-11-2018 IPR006015 Universal stress protein A D3790_07760 90249265d0bea8951b220df673d71bb4 142 PRINTS PR01438 Universal stress protein signature 103 115 2.8E-12 T 01-11-2018 IPR006015 Universal stress protein A D3790_07760 90249265d0bea8951b220df673d71bb4 142 PRINTS PR01438 Universal stress protein signature 120 142 2.8E-12 T 01-11-2018 IPR006015 Universal stress protein A D3790_07760 90249265d0bea8951b220df673d71bb4 142 Gene3D G3DSA:3.40.50.620 1 142 1.3E-32 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_00605 d5196881b1be8b6ceab07082e1a4cbe1 201 SMART SM00857 8 142 5.2E-48 T 01-11-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 D3790_00605 d5196881b1be8b6ceab07082e1a4cbe1 201 Gene3D G3DSA:3.40.50.1390 8 131 8.6E-42 T 01-11-2018 D3790_00605 d5196881b1be8b6ceab07082e1a4cbe1 201 ProSitePatterns PS00397 Site-specific recombinases active site. 11 19 - T 01-11-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 D3790_00605 d5196881b1be8b6ceab07082e1a4cbe1 201 Pfam PF00239 Resolvase, N terminal domain 9 141 1.5E-39 T 01-11-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 D3790_00605 d5196881b1be8b6ceab07082e1a4cbe1 201 SUPERFAMILY SSF53041 9 141 1.18E-40 T 01-11-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 D3790_12975 5284557e76ba7aa7f52c83a1b1e77964 498 Pfam PF01526 Tn3 transposase DDE domain 90 478 1.2E-114 T 01-11-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 D3790_08175 07fac10d3d4febd18e8bb965a8f3dc5c 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 47.533 T 01-11-2018 IPR022913 Multidrug resistance protein MdtK D3790_08175 07fac10d3d4febd18e8bb965a8f3dc5c 457 PIRSF PIRSF006603 3 454 5.3E-58 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D3790_08175 07fac10d3d4febd18e8bb965a8f3dc5c 457 Pfam PF01554 MatE 17 177 2.7E-33 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D3790_08175 07fac10d3d4febd18e8bb965a8f3dc5c 457 Pfam PF01554 MatE 244 405 5.4E-37 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D3790_08175 07fac10d3d4febd18e8bb965a8f3dc5c 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 2.0E-111 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D3790_05365 d28333b428835e22aff3097076ab2598 349 Pfam PF01791 DeoC/LacD family aldolase 69 325 4.1E-70 T 01-11-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 D3790_05365 d28333b428835e22aff3097076ab2598 349 SUPERFAMILY SSF51569 57 343 1.08E-64 T 01-11-2018 D3790_05365 d28333b428835e22aff3097076ab2598 349 SMART SM01133 68 325 4.6E-40 T 01-11-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 D3790_05365 d28333b428835e22aff3097076ab2598 349 Gene3D G3DSA:3.20.20.70 40 348 6.1E-70 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_12415 9e3177a22988162685ea2e7eaddb5718 62 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 6 53 1.1E-15 T 01-11-2018 IPR010260 DNA-binding transcriptional activator AlpA D3790_12415 9e3177a22988162685ea2e7eaddb5718 62 Gene3D G3DSA:1.10.238.160 5 61 1.1E-5 T 01-11-2018 D3790_13645 bd7aca213f8c7845aa12acacaa8f47a6 467 Gene3D G3DSA:3.90.1150.10 7 459 1.5E-195 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_13645 bd7aca213f8c7845aa12acacaa8f47a6 467 Pfam PF01212 Beta-eliminating lyase 47 430 3.7E-93 T 01-11-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 D3790_13645 bd7aca213f8c7845aa12acacaa8f47a6 467 PIRSF PIRSF001386 1 465 1.6E-205 T 01-11-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 D3790_13645 bd7aca213f8c7845aa12acacaa8f47a6 467 SUPERFAMILY SSF53383 5 464 3.06E-124 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_13645 bd7aca213f8c7845aa12acacaa8f47a6 467 Gene3D G3DSA:3.40.640.10 59 325 1.5E-195 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_01050 a023ebf908d583803abc10b0d7e1e397 193 SUPERFAMILY SSF53697 1 189 9.08E-53 T 01-11-2018 D3790_01050 a023ebf908d583803abc10b0d7e1e397 193 Pfam PF13580 SIS domain 12 146 5.5E-32 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 D3790_01050 a023ebf908d583803abc10b0d7e1e397 193 Gene3D G3DSA:3.40.50.10490 1 192 1.8E-72 T 01-11-2018 D3790_01050 a023ebf908d583803abc10b0d7e1e397 193 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 1.6E-83 T 01-11-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 D3790_01050 a023ebf908d583803abc10b0d7e1e397 193 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.468 T 01-11-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 D3790_09455 c8f092da938dd7fbc6a6b28a22bb69e9 546 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 353 9.5E-71 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 D3790_09455 c8f092da938dd7fbc6a6b28a22bb69e9 546 PRINTS PR01005 Flagellar hook-associated protein signature 124 144 1.4E-75 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 D3790_09455 c8f092da938dd7fbc6a6b28a22bb69e9 546 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 1.4E-75 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 D3790_09455 c8f092da938dd7fbc6a6b28a22bb69e9 546 PRINTS PR01005 Flagellar hook-associated protein signature 465 486 1.4E-75 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 D3790_09455 c8f092da938dd7fbc6a6b28a22bb69e9 546 PRINTS PR01005 Flagellar hook-associated protein signature 440 459 1.4E-75 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 D3790_09455 c8f092da938dd7fbc6a6b28a22bb69e9 546 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 1.4E-75 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 D3790_09455 c8f092da938dd7fbc6a6b28a22bb69e9 546 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 1.4E-75 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 D3790_09455 c8f092da938dd7fbc6a6b28a22bb69e9 546 PRINTS PR01005 Flagellar hook-associated protein signature 408 425 1.4E-75 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 D3790_09455 c8f092da938dd7fbc6a6b28a22bb69e9 546 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 1.4E-75 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 D3790_09455 c8f092da938dd7fbc6a6b28a22bb69e9 546 PRINTS PR01005 Flagellar hook-associated protein signature 512 536 1.4E-75 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 D3790_09455 c8f092da938dd7fbc6a6b28a22bb69e9 546 PRINTS PR01005 Flagellar hook-associated protein signature 157 181 1.4E-75 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 D3790_09455 c8f092da938dd7fbc6a6b28a22bb69e9 546 PRINTS PR01005 Flagellar hook-associated protein signature 260 282 1.4E-75 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 D3790_09455 c8f092da938dd7fbc6a6b28a22bb69e9 546 SUPERFAMILY SSF64518 139 543 9.94E-43 T 01-11-2018 D3790_09455 c8f092da938dd7fbc6a6b28a22bb69e9 546 Pfam PF00460 Flagella basal body rod protein 6 30 3.2E-5 T 01-11-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 D3790_09455 c8f092da938dd7fbc6a6b28a22bb69e9 546 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 490 544 2.6E-8 T 01-11-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D3790_15495 0fd91eefe6475b98976a9356d2f22ea9 407 Gene3D G3DSA:3.90.220.20 227 364 3.0E-76 T 01-11-2018 D3790_15495 0fd91eefe6475b98976a9356d2f22ea9 407 SUPERFAMILY SSF116734 224 407 2.78E-42 T 01-11-2018 D3790_15495 0fd91eefe6475b98976a9356d2f22ea9 407 Gene3D G3DSA:1.10.287.1120 167 405 3.0E-76 T 01-11-2018 D3790_15495 0fd91eefe6475b98976a9356d2f22ea9 407 SUPERFAMILY SSF116734 2 221 2.45E-35 T 01-11-2018 D3790_15495 0fd91eefe6475b98976a9356d2f22ea9 407 Pfam PF01420 Type I restriction modification DNA specificity domain 225 395 2.0E-28 T 01-11-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 D3790_15495 0fd91eefe6475b98976a9356d2f22ea9 407 Pfam PF01420 Type I restriction modification DNA specificity domain 66 193 1.5E-9 T 01-11-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 D3790_15495 0fd91eefe6475b98976a9356d2f22ea9 407 Gene3D G3DSA:3.90.220.20 13 166 3.0E-76 T 01-11-2018 D3790_13900 62cf6a6466821ed44c263a6e2a97db57 293 SUPERFAMILY SSF53448 1 286 1.85E-92 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_13900 62cf6a6466821ed44c263a6e2a97db57 293 Pfam PF00483 Nucleotidyl transferase 2 238 3.4E-72 T 01-11-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 D3790_13900 62cf6a6466821ed44c263a6e2a97db57 293 Gene3D G3DSA:3.90.550.10 1 293 7.2E-88 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_13900 62cf6a6466821ed44c263a6e2a97db57 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 1.6E-156 T 01-11-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 D3790_02620 422f32cec4d080148195f8699341d0de 106 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 19 69 5.4E-19 T 01-11-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 D3790_12085 82817ccad43486434ccb9885d8344c13 60 Pfam PF13132 Domain of unknown function (DUF3950) 26 52 2.8E-11 T 01-11-2018 IPR025030 Domain of unknown function DUF3950 D3790_15795 1fe2d6b047129d1b2795eef2e103533b 309 Pfam PF00583 Acetyltransferase (GNAT) family 45 117 1.4E-9 T 01-11-2018 IPR000182 GNAT domain D3790_15795 1fe2d6b047129d1b2795eef2e103533b 309 SUPERFAMILY SSF55729 3 154 1.1E-18 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_15795 1fe2d6b047129d1b2795eef2e103533b 309 Gene3D G3DSA:3.40.630.30 4 147 2.5E-14 T 01-11-2018 D3790_09785 8f191b5e49a876d90ce78e18a6e98008 396 Gene3D G3DSA:3.40.640.10 45 315 5.1E-167 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_09785 8f191b5e49a876d90ce78e18a6e98008 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 01-11-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 D3790_09785 8f191b5e49a876d90ce78e18a6e98008 396 Pfam PF00155 Aminotransferase class I and II 27 392 6.1E-92 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D3790_09785 8f191b5e49a876d90ce78e18a6e98008 396 Gene3D G3DSA:3.90.1150.10 11 391 5.1E-167 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_09785 8f191b5e49a876d90ce78e18a6e98008 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 5.2E-40 T 01-11-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 D3790_09785 8f191b5e49a876d90ce78e18a6e98008 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 5.2E-40 T 01-11-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 D3790_09785 8f191b5e49a876d90ce78e18a6e98008 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 5.2E-40 T 01-11-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 D3790_09785 8f191b5e49a876d90ce78e18a6e98008 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 5.2E-40 T 01-11-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 D3790_09785 8f191b5e49a876d90ce78e18a6e98008 396 SUPERFAMILY SSF53383 1 395 2.15E-119 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_17855 9770189b44617f1ec868141ec9533329 73 SUPERFAMILY SSF46955 17 68 1.17E-6 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily D3790_17855 9770189b44617f1ec868141ec9533329 73 Pfam PF12728 Helix-turn-helix domain 18 66 1.7E-9 T 01-11-2018 D3790_08670 1e503c24ad88fac63661b168dfba2961 237 Gene3D G3DSA:2.10.109.10 102 236 2.2E-40 T 01-11-2018 D3790_08670 1e503c24ad88fac63661b168dfba2961 237 Pfam PF00717 Peptidase S24-like 149 219 2.5E-11 T 01-11-2018 IPR015927 Peptidase S24/S26A/S26B/S26C D3790_08670 1e503c24ad88fac63661b168dfba2961 237 SMART SM00530 15 74 6.4E-8 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_08670 1e503c24ad88fac63661b168dfba2961 237 Pfam PF01381 Helix-turn-helix 24 73 1.4E-9 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_08670 1e503c24ad88fac63661b168dfba2961 237 Gene3D G3DSA:1.10.260.40 1 89 2.3E-32 T 01-11-2018 D3790_08670 1e503c24ad88fac63661b168dfba2961 237 SUPERFAMILY SSF51306 141 231 1.05E-21 T 01-11-2018 IPR036286 LexA/Signal peptidase-like superfamily D3790_08670 1e503c24ad88fac63661b168dfba2961 237 SUPERFAMILY SSF47413 1 83 5.35E-19 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_09255 572fb549c3f11ccba1a5581897a80fdf 490 Pfam PF07196 Flagellin hook IN motif 129 192 2.5E-13 T 01-11-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 D3790_09255 572fb549c3f11ccba1a5581897a80fdf 490 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 106 5.3E-21 T 01-11-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 D3790_09255 572fb549c3f11ccba1a5581897a80fdf 490 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 233 480 7.4E-69 T 01-11-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 D3790_14615 a5d7676ca52b60e241e52cfc5b6bddf3 73 SUPERFAMILY SSF143120 1 70 6.45E-15 T 01-11-2018 IPR036165 YefM-like superfamily D3790_14615 a5d7676ca52b60e241e52cfc5b6bddf3 73 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 54 7.9E-14 T 01-11-2018 D3790_14615 a5d7676ca52b60e241e52cfc5b6bddf3 73 Gene3D G3DSA:3.40.1620.10 1 52 4.0E-23 T 01-11-2018 D3790_14615 a5d7676ca52b60e241e52cfc5b6bddf3 73 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 53 1.7E-13 T 01-11-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM D3790_16260 5429c40644d2b17b2c86719c5f1c3e44 346 Gene3D G3DSA:3.40.190.10 103 278 6.8E-125 T 01-11-2018 D3790_16260 5429c40644d2b17b2c86719c5f1c3e44 346 Pfam PF12849 PBP superfamily domain 25 307 8.1E-62 T 01-11-2018 IPR024370 PBP domain D3790_16260 5429c40644d2b17b2c86719c5f1c3e44 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 3.8E-124 T 01-11-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 D3790_16260 5429c40644d2b17b2c86719c5f1c3e44 346 Gene3D G3DSA:3.40.190.10 29 325 6.8E-125 T 01-11-2018 D3790_16260 5429c40644d2b17b2c86719c5f1c3e44 346 PIRSF PIRSF002756 1 338 2.9E-101 T 01-11-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 D3790_16260 5429c40644d2b17b2c86719c5f1c3e44 346 SUPERFAMILY SSF53850 28 339 7.44E-96 T 01-11-2018 D3790_16845 f92290f558387b80916bdc2b28d8983a 489 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 302 374 1.2E-7 T 01-11-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 D3790_16845 f92290f558387b80916bdc2b28d8983a 489 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D3790_16845 f92290f558387b80916bdc2b28d8983a 489 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 168 281 2.2E-15 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 D3790_16845 f92290f558387b80916bdc2b28d8983a 489 Gene3D G3DSA:3.40.50.720 156 292 3.7E-22 T 01-11-2018 D3790_16845 f92290f558387b80916bdc2b28d8983a 489 SUPERFAMILY SSF51735 166 312 4.21E-22 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_16845 f92290f558387b80916bdc2b28d8983a 489 SUPERFAMILY SSF55811 7 114 5.01E-19 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D3790_16845 f92290f558387b80916bdc2b28d8983a 489 Pfam PF00293 NUDIX domain 6 114 4.4E-14 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D3790_16845 f92290f558387b80916bdc2b28d8983a 489 SUPERFAMILY SSF55347 301 441 2.09E-11 T 01-11-2018 D3790_16845 f92290f558387b80916bdc2b28d8983a 489 Gene3D G3DSA:3.90.79.10 2 131 1.1E-19 T 01-11-2018 D3790_16845 f92290f558387b80916bdc2b28d8983a 489 Gene3D G3DSA:3.30.360.10 293 486 4.9E-16 T 01-11-2018 D3790_19505 b9c50302d40d756ed59f2a6a5a437087 141 Gene3D G3DSA:3.30.420.270 63 132 5.7E-29 T 01-11-2018 D3790_19505 b9c50302d40d756ed59f2a6a5a437087 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 133 1.8E-30 T 01-11-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 D3790_19505 b9c50302d40d756ed59f2a6a5a437087 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 16 136 1.7E-65 T 01-11-2018 IPR014170 TonB system transport protein ExbD type-1 GO:0016020|GO:0055085 D3790_07765 07727b06422fd624b3febfc7ba1009f3 416 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 413 1.3E-144 T 01-11-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 D3790_07765 07727b06422fd624b3febfc7ba1009f3 416 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.8E-20 T 01-11-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 D3790_07765 07727b06422fd624b3febfc7ba1009f3 416 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 413 1.1E-61 T 01-11-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 D3790_06370 e290808fe84a82e7a9f2a8d287ac3997 144 SUPERFAMILY SSF54637 8 135 7.19E-40 T 01-11-2018 IPR029069 HotDog domain superfamily D3790_06370 e290808fe84a82e7a9f2a8d287ac3997 144 Gene3D G3DSA:3.10.129.10 1 142 8.9E-44 T 01-11-2018 D3790_06370 e290808fe84a82e7a9f2a8d287ac3997 144 Pfam PF03061 Thioesterase superfamily 26 97 2.2E-19 T 01-11-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 D3790_06045 5c9c588d7efbab6d3353d1c11f29ddb4 194 Gene3D G3DSA:2.60.40.4150 40 183 1.1E-40 T 01-11-2018 IPR038706 Type VI secretion protein SciN-like superfamily D3790_06045 5c9c588d7efbab6d3353d1c11f29ddb4 194 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 35 151 1.4E-24 T 01-11-2018 IPR017734 Type VI secretion system, lipoprotein SciN D3790_06045 5c9c588d7efbab6d3353d1c11f29ddb4 194 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 28 151 8.5E-24 T 01-11-2018 IPR017734 Type VI secretion system, lipoprotein SciN D3790_08840 28ce34d303de984a227b2315482dbf08 350 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 343 40.909 T 01-11-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 D3790_08840 28ce34d303de984a227b2315482dbf08 350 SUPERFAMILY SSF52738 157 342 7.45E-75 T 01-11-2018 IPR035909 Methylesterase CheB, C-terminal D3790_08840 28ce34d303de984a227b2315482dbf08 350 Pfam PF00072 Response regulator receiver domain 6 109 1.6E-23 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_08840 28ce34d303de984a227b2315482dbf08 350 Pfam PF01339 CheB methylesterase 160 337 3.0E-64 T 01-11-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 D3790_08840 28ce34d303de984a227b2315482dbf08 350 PIRSF PIRSF000876 1 346 4.3E-135 T 01-11-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 D3790_08840 28ce34d303de984a227b2315482dbf08 350 SUPERFAMILY SSF52172 1 108 1.42E-27 T 01-11-2018 IPR011006 CheY-like superfamily D3790_08840 28ce34d303de984a227b2315482dbf08 350 Gene3D G3DSA:3.40.50.180 149 350 5.4E-83 T 01-11-2018 IPR035909 Methylesterase CheB, C-terminal D3790_08840 28ce34d303de984a227b2315482dbf08 350 Gene3D G3DSA:3.40.50.2300 1 133 1.3E-31 T 01-11-2018 D3790_08840 28ce34d303de984a227b2315482dbf08 350 SMART SM00448 4 119 4.1E-23 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D3790_03615 f79eecf3630cf9bec8d38dbf305ebc7d 565 Pfam PF03814 Potassium-transporting ATPase A subunit 12 561 8.4E-233 T 01-11-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 D3790_03615 f79eecf3630cf9bec8d38dbf305ebc7d 565 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 562 2.8E-240 T 01-11-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 D3790_03615 f79eecf3630cf9bec8d38dbf305ebc7d 565 PIRSF PIRSF001294 1 565 9.9E-231 T 01-11-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 D3790_03615 f79eecf3630cf9bec8d38dbf305ebc7d 565 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 563 34.408 T 01-11-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 D3790_14960 5d22c5d406b522d09c323aa784bdff17 389 SUPERFAMILY SSF53098 31 377 2.12E-22 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_14960 5d22c5d406b522d09c323aa784bdff17 389 Pfam PF13546 DDE superfamily endonuclease 19 237 3.8E-56 T 01-11-2018 IPR038721 Transposase IS701-like, DDE domain D3790_02535 fc3269656ccc5026e95101de5e6fa494 258 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 121 241 1.3E-15 T 01-11-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 D3790_02535 fc3269656ccc5026e95101de5e6fa494 258 SMART SM00047 109 235 4.0E-8 T 01-11-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 D3790_02535 fc3269656ccc5026e95101de5e6fa494 258 Gene3D G3DSA:1.10.530.10 120 248 5.4E-14 T 01-11-2018 D3790_10585 45b5686c9e1a38b92127ab64691fdba0 355 Gene3D G3DSA:1.10.10.10 2 57 3.5E-10 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_10585 45b5686c9e1a38b92127ab64691fdba0 355 SUPERFAMILY SSF46785 3 54 5.3E-9 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_10585 45b5686c9e1a38b92127ab64691fdba0 355 Pfam PF00294 pfkB family carbohydrate kinase 61 343 4.0E-57 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB D3790_10585 45b5686c9e1a38b92127ab64691fdba0 355 SUPERFAMILY SSF53613 61 343 4.52E-56 T 01-11-2018 IPR029056 Ribokinase-like D3790_10585 45b5686c9e1a38b92127ab64691fdba0 355 Gene3D G3DSA:3.40.1190.20 58 352 2.1E-71 T 01-11-2018 IPR029056 Ribokinase-like D3790_10585 45b5686c9e1a38b92127ab64691fdba0 355 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 48 9.0E-9 T 01-11-2018 D3790_08500 52a9dfb7f10386cf8466257293ea118c 76 Pfam PF06440 DNA polymerase III, theta subunit 3 71 2.1E-38 T 01-11-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_08500 52a9dfb7f10386cf8466257293ea118c 76 Gene3D G3DSA:1.20.58.250 1 76 3.9E-37 T 01-11-2018 IPR036745 DNA polymerase III-theta superfamily GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_08500 52a9dfb7f10386cf8466257293ea118c 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 1 74 1.0E-25 T 01-11-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_08500 52a9dfb7f10386cf8466257293ea118c 76 SUPERFAMILY SSF46575 1 75 6.41E-34 T 01-11-2018 D3790_06890 8532c524960f8ecff35953306190949b 476 Gene3D G3DSA:3.40.309.10 253 441 4.3E-159 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D3790_06890 8532c524960f8ecff35953306190949b 476 SUPERFAMILY SSF53720 4 473 4.97E-151 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D3790_06890 8532c524960f8ecff35953306190949b 476 Gene3D G3DSA:3.40.605.10 10 469 4.3E-159 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D3790_06890 8532c524960f8ecff35953306190949b 476 Pfam PF00171 Aldehyde dehydrogenase family 14 471 4.1E-154 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D3790_06890 8532c524960f8ecff35953306190949b 476 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 D3790_06890 8532c524960f8ecff35953306190949b 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 D3790_01600 0a8a9603fcee542eb10b511979743728 177 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 57 159 4.9E-38 T 01-11-2018 IPR022260 Integrating conjugative element protein PilL, PFGI-1 D3790_06790 8776bd3580baafc653abbf9f2b018609 180 Pfam PF02082 Transcriptional regulator 4 83 9.8E-23 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type D3790_06790 8776bd3580baafc653abbf9f2b018609 180 SUPERFAMILY SSF46785 5 144 1.21E-31 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_06790 8776bd3580baafc653abbf9f2b018609 180 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 01-11-2018 IPR030489 Transcription regulator Rrf2-type, conserved site D3790_06790 8776bd3580baafc653abbf9f2b018609 180 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 5 142 1.2E-28 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type D3790_06790 8776bd3580baafc653abbf9f2b018609 180 Gene3D G3DSA:1.10.10.10 3 154 1.3E-30 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_03555 1451743f462072f388f1d696715e41ab 247 SUPERFAMILY SSF53335 8 220 2.99E-37 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_03555 1451743f462072f388f1d696715e41ab 247 Pfam PF13847 Methyltransferase domain 40 147 4.2E-21 T 01-11-2018 IPR025714 Methyltransferase domain D3790_03555 1451743f462072f388f1d696715e41ab 247 Gene3D G3DSA:3.40.50.150 26 239 3.4E-36 T 01-11-2018 D3790_05865 d00eca9b5f26066551a7919dfa43423f 1156 Pfam PF03538 Salmonella virulence plasmid 28.1kDa A protein 30 483 8.3E-84 T 01-11-2018 IPR018003 Insecticidal toxin complex/plasmid virulence protein D3790_11275 3f91693dd6037a968af5a1fc385bb1a1 660 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 01-11-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_11275 3f91693dd6037a968af5a1fc385bb1a1 660 Gene3D G3DSA:1.20.210.10 31 566 2.3E-189 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_11275 3f91693dd6037a968af5a1fc385bb1a1 660 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 2.1E-134 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_11275 3f91693dd6037a968af5a1fc385bb1a1 660 SUPERFAMILY SSF81442 43 558 1.16E-177 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_11275 3f91693dd6037a968af5a1fc385bb1a1 660 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 3 647 0.0 T 01-11-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 D3790_11275 3f91693dd6037a968af5a1fc385bb1a1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 5.9E-95 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_11275 3f91693dd6037a968af5a1fc385bb1a1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 5.9E-95 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_11275 3f91693dd6037a968af5a1fc385bb1a1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 5.9E-95 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_11275 3f91693dd6037a968af5a1fc385bb1a1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 5.9E-95 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_11275 3f91693dd6037a968af5a1fc385bb1a1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 5.9E-95 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_11275 3f91693dd6037a968af5a1fc385bb1a1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 5.9E-95 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_11275 3f91693dd6037a968af5a1fc385bb1a1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 5.9E-95 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_11275 3f91693dd6037a968af5a1fc385bb1a1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 5.9E-95 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_11275 3f91693dd6037a968af5a1fc385bb1a1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 5.9E-95 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_11275 3f91693dd6037a968af5a1fc385bb1a1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 5.9E-95 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_11275 3f91693dd6037a968af5a1fc385bb1a1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 5.9E-95 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_11275 3f91693dd6037a968af5a1fc385bb1a1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 5.9E-95 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_10540 68c9187c3775b3e9835ffa2f88ce5113 213 SUPERFAMILY SSF63965 2 206 1.96E-64 T 01-11-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 D3790_10540 68c9187c3775b3e9835ffa2f88ce5113 213 Gene3D G3DSA:3.40.50.10230 1 212 1.1E-72 T 01-11-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 D3790_10540 68c9187c3775b3e9835ffa2f88ce5113 213 Pfam PF02570 Precorrin-8X methylmutase 10 205 8.8E-68 T 01-11-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 D3790_10170 f9dc4cbadf577bd89d7011dacd19cdef 213 SUPERFAMILY SSF52540 7 205 9.66E-51 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_10170 f9dc4cbadf577bd89d7011dacd19cdef 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 40.07 T 01-11-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 D3790_10170 f9dc4cbadf577bd89d7011dacd19cdef 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 3.6E-44 T 01-11-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 D3790_10170 f9dc4cbadf577bd89d7011dacd19cdef 213 Gene3D G3DSA:3.40.50.300 7 213 5.4E-63 T 01-11-2018 D3790_10170 f9dc4cbadf577bd89d7011dacd19cdef 213 TIGRFAM TIGR00235 udk: uridine kinase 6 212 4.1E-93 T 01-11-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 D3790_10170 f9dc4cbadf577bd89d7011dacd19cdef 213 PRINTS PR00988 Uridine kinase signature 87 102 2.0E-38 T 01-11-2018 D3790_10170 f9dc4cbadf577bd89d7011dacd19cdef 213 PRINTS PR00988 Uridine kinase signature 157 168 2.0E-38 T 01-11-2018 D3790_10170 f9dc4cbadf577bd89d7011dacd19cdef 213 PRINTS PR00988 Uridine kinase signature 143 153 2.0E-38 T 01-11-2018 D3790_10170 f9dc4cbadf577bd89d7011dacd19cdef 213 PRINTS PR00988 Uridine kinase signature 179 192 2.0E-38 T 01-11-2018 D3790_10170 f9dc4cbadf577bd89d7011dacd19cdef 213 PRINTS PR00988 Uridine kinase signature 42 53 2.0E-38 T 01-11-2018 D3790_10170 f9dc4cbadf577bd89d7011dacd19cdef 213 PRINTS PR00988 Uridine kinase signature 8 25 2.0E-38 T 01-11-2018 D3790_08470 21afa1413735c275b45ed44de2b046f4 236 Pfam PF17516 ProQ C-terminal domain 189 235 1.4E-22 T 01-11-2018 IPR035236 RNA chaperone ProQ, C-terminal D3790_08470 21afa1413735c275b45ed44de2b046f4 236 Gene3D G3DSA:1.10.1710.10 1 121 3.1E-24 T 01-11-2018 IPR036442 ProQ/FinO domain superfamily D3790_08470 21afa1413735c275b45ed44de2b046f4 236 SUPERFAMILY SSF48657 5 119 3.4E-38 T 01-11-2018 IPR036442 ProQ/FinO domain superfamily D3790_08470 21afa1413735c275b45ed44de2b046f4 236 Pfam PF04352 ProQ/FINO family 8 115 4.6E-42 T 01-11-2018 IPR016103 ProQ/FinO domain D3790_08470 21afa1413735c275b45ed44de2b046f4 236 SMART SM00945 5 119 5.2E-61 T 01-11-2018 IPR016103 ProQ/FinO domain D3790_08470 21afa1413735c275b45ed44de2b046f4 236 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 236 30.297 T 01-11-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 D3790_13340 d065cdcb9f57f9d8d2c174d0d5fc6f0c 316 Gene3D G3DSA:2.30.130.10 249 314 2.9E-23 T 01-11-2018 IPR036974 PUA domain superfamily GO:0003723 D3790_13340 d065cdcb9f57f9d8d2c174d0d5fc6f0c 316 SUPERFAMILY SSF55120 9 248 6.62E-83 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_13340 d065cdcb9f57f9d8d2c174d0d5fc6f0c 316 SUPERFAMILY SSF88697 250 310 5.47E-13 T 01-11-2018 IPR015947 PUA-like superfamily D3790_13340 d065cdcb9f57f9d8d2c174d0d5fc6f0c 316 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 218 1.2E-88 T 01-11-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_13340 d065cdcb9f57f9d8d2c174d0d5fc6f0c 316 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 309 1.5E-17 T 01-11-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_13340 d065cdcb9f57f9d8d2c174d0d5fc6f0c 316 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 309 18.49 T 01-11-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 D3790_13340 d065cdcb9f57f9d8d2c174d0d5fc6f0c 316 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 3.9E-59 T 01-11-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 D3790_13340 d065cdcb9f57f9d8d2c174d0d5fc6f0c 316 Gene3D G3DSA:3.30.2350.10 2 248 1.2E-94 T 01-11-2018 D3790_13340 d065cdcb9f57f9d8d2c174d0d5fc6f0c 316 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 1.2E-23 T 01-11-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 D3790_10670 b64e0bfdba0c98b98b75ed9493ec41e4 76 SUPERFAMILY SSF53448 3 60 4.69E-10 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_10670 b64e0bfdba0c98b98b75ed9493ec41e4 76 Pfam PF00535 Glycosyl transferase family 2 6 63 1.4E-7 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 D3790_10670 b64e0bfdba0c98b98b75ed9493ec41e4 76 Gene3D G3DSA:3.90.550.10 1 70 6.6E-10 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_15485 2996d93a481629834ee7b6f4ab7c76ed 609 Pfam PF13522 Glutamine amidotransferase domain 66 183 2.3E-22 T 01-11-2018 D3790_15485 2996d93a481629834ee7b6f4ab7c76ed 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 40.995 T 01-11-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 D3790_15485 2996d93a481629834ee7b6f4ab7c76ed 609 SUPERFAMILY SSF56235 2 233 4.55E-76 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D3790_15485 2996d93a481629834ee7b6f4ab7c76ed 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 5.6E-265 T 01-11-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 D3790_15485 2996d93a481629834ee7b6f4ab7c76ed 609 Gene3D G3DSA:3.40.50.10490 447 594 9.9E-154 T 01-11-2018 D3790_15485 2996d93a481629834ee7b6f4ab7c76ed 609 Gene3D G3DSA:3.40.50.10490 249 608 9.9E-154 T 01-11-2018 D3790_15485 2996d93a481629834ee7b6f4ab7c76ed 609 SUPERFAMILY SSF53697 245 609 1.67E-112 T 01-11-2018 D3790_15485 2996d93a481629834ee7b6f4ab7c76ed 609 Gene3D G3DSA:3.60.20.10 2 241 1.6E-83 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D3790_15485 2996d93a481629834ee7b6f4ab7c76ed 609 Pfam PF01380 SIS domain 462 591 8.1E-28 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 D3790_15485 2996d93a481629834ee7b6f4ab7c76ed 609 Pfam PF01380 SIS domain 289 418 4.3E-32 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 D3790_02195 405214ff6d0821431a87b8b171eeaa52 374 SUPERFAMILY SSF53474 116 261 1.3E-15 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_02195 405214ff6d0821431a87b8b171eeaa52 374 Gene3D G3DSA:3.40.50.1820 43 236 2.9E-7 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_07395 ecf1819e0b21af83d1be799417c0428b 334 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 163 2.3E-11 T 01-11-2018 IPR013332 Ketopantoate reductase, N-terminal domain D3790_07395 ecf1819e0b21af83d1be799417c0428b 334 Gene3D G3DSA:1.10.1040.10 192 319 1.8E-13 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 D3790_07395 ecf1819e0b21af83d1be799417c0428b 334 Gene3D G3DSA:3.40.50.720 2 190 2.8E-12 T 01-11-2018 D3790_07395 ecf1819e0b21af83d1be799417c0428b 334 SUPERFAMILY SSF48179 193 314 2.28E-12 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D3790_07395 ecf1819e0b21af83d1be799417c0428b 334 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 192 310 6.7E-13 T 01-11-2018 IPR013752 Ketopantoate reductase, C-terminal domain D3790_17185 afb389ae1bdf2256444aa818f4098879 193 Gene3D G3DSA:3.90.210.10 90 183 5.0E-13 T 01-11-2018 D3790_17185 afb389ae1bdf2256444aa818f4098879 193 SUPERFAMILY SSF56399 106 181 2.37E-7 T 01-11-2018 D3790_13305 54ef88f20f05f7861163c1bb172f45ee 1013 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 827 1011 1.8E-57 T 01-11-2018 IPR008541 Protein of unknown function DUF823 D3790_13305 54ef88f20f05f7861163c1bb172f45ee 1013 SUPERFAMILY SSF49373 539 632 1.52E-11 T 01-11-2018 IPR008964 Invasin/intimin cell-adhesion fragments D3790_13305 54ef88f20f05f7861163c1bb172f45ee 1013 Gene3D G3DSA:2.60.40.10 535 638 2.4E-16 T 01-11-2018 IPR013783 Immunoglobulin-like fold D3790_13305 54ef88f20f05f7861163c1bb172f45ee 1013 Gene3D G3DSA:3.10.350.10 59 108 1.4E-5 T 01-11-2018 IPR036779 LysM domain superfamily D3790_13305 54ef88f20f05f7861163c1bb172f45ee 1013 Pfam PF11924 Inverse autotransporter, beta-domain 156 429 1.1E-108 T 01-11-2018 IPR024519 Inverse autotransporter, beta-domain D3790_13305 54ef88f20f05f7861163c1bb172f45ee 1013 PRINTS PR01369 Intimin signature 464 476 4.3E-15 T 01-11-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 D3790_13305 54ef88f20f05f7861163c1bb172f45ee 1013 PRINTS PR01369 Intimin signature 309 328 4.3E-15 T 01-11-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 D3790_13305 54ef88f20f05f7861163c1bb172f45ee 1013 PRINTS PR01369 Intimin signature 377 396 4.3E-15 T 01-11-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 D3790_13305 54ef88f20f05f7861163c1bb172f45ee 1013 PRINTS PR01369 Intimin signature 281 296 4.3E-15 T 01-11-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 D3790_13305 54ef88f20f05f7861163c1bb172f45ee 1013 Gene3D G3DSA:2.40.160.160 192 436 1.1E-102 T 01-11-2018 IPR038177 Inverse autotransporter, beta-domain superfamily D3790_13305 54ef88f20f05f7861163c1bb172f45ee 1013 Pfam PF09134 Invasin, domain 3 538 632 3.3E-14 T 01-11-2018 IPR015217 Invasin, domain 3 D3790_04115 101f910ad702d46e31083983c86a4bae 395 Gene3D G3DSA:1.20.1720.10 11 389 1.5E-99 T 01-11-2018 D3790_04115 101f910ad702d46e31083983c86a4bae 395 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 11 388 3.6E-129 T 01-11-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 D3790_04115 101f910ad702d46e31083983c86a4bae 395 Pfam PF07690 Major Facilitator Superfamily 16 358 2.3E-48 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_04115 101f910ad702d46e31083983c86a4bae 395 SUPERFAMILY SSF103473 9 392 1.96E-66 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_06115 479a5430d4b5e507e9dd407c24ef355d 380 Pfam PF07282 Putative transposase DNA-binding domain 291 361 4.2E-23 T 01-11-2018 IPR010095 Transposase IS605, OrfB, C-terminal D3790_06115 479a5430d4b5e507e9dd407c24ef355d 380 Pfam PF01385 Probable transposase 175 278 1.1E-23 T 01-11-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 D3790_06115 479a5430d4b5e507e9dd407c24ef355d 380 Pfam PF12323 Helix-turn-helix domain 1 45 3.2E-16 T 01-11-2018 IPR021027 Transposase, putative, helix-turn-helix domain D3790_06115 479a5430d4b5e507e9dd407c24ef355d 380 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 246 318 3.4E-11 T 01-11-2018 IPR010095 Transposase IS605, OrfB, C-terminal D3790_03010 a2f1b8bc7a5cb23b690565e41da05a9a 98 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 8 74 3.0E-20 T 01-11-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 D3790_11740 5348ab10a6db7a829caf96c52a0af697 280 Gene3D G3DSA:3.40.50.1980 34 153 1.3E-34 T 01-11-2018 D3790_11740 5348ab10a6db7a829caf96c52a0af697 280 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 12 280 48.364 T 01-11-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 D3790_11740 5348ab10a6db7a829caf96c52a0af697 280 Pfam PF01497 Periplasmic binding protein 38 241 2.2E-27 T 01-11-2018 IPR002491 ABC transporter periplasmic binding domain D3790_11740 5348ab10a6db7a829caf96c52a0af697 280 Gene3D G3DSA:3.40.50.1980 155 278 1.9E-33 T 01-11-2018 D3790_11740 5348ab10a6db7a829caf96c52a0af697 280 SUPERFAMILY SSF53807 36 276 4.71E-56 T 01-11-2018 D3790_04670 b8d8eb9f5f877849969080542d243312 442 Gene3D G3DSA:3.90.550.10 57 286 3.2E-45 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_04670 b8d8eb9f5f877849969080542d243312 442 Pfam PF13641 Glycosyltransferase like family 2 76 296 5.3E-34 T 01-11-2018 D3790_04670 b8d8eb9f5f877849969080542d243312 442 SUPERFAMILY SSF53448 73 344 7.64E-64 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_04670 b8d8eb9f5f877849969080542d243312 442 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 30 437 3.1E-197 T 01-11-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0043708 D3790_17740 ef94248de0bb5a52cd51f96a7c7cd21d 414 Gene3D G3DSA:1.10.3860.10 7 405 4.2E-73 T 01-11-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 D3790_17740 ef94248de0bb5a52cd51f96a7c7cd21d 414 Pfam PF00375 Sodium:dicarboxylate symporter family 17 399 1.5E-65 T 01-11-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 D3790_17740 ef94248de0bb5a52cd51f96a7c7cd21d 414 SUPERFAMILY SSF118215 17 400 1.28E-95 T 01-11-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 D3790_17740 ef94248de0bb5a52cd51f96a7c7cd21d 414 PRINTS PR00173 Glutamate-aspartate symporter signature 17 37 4.5E-13 T 01-11-2018 D3790_17740 ef94248de0bb5a52cd51f96a7c7cd21d 414 PRINTS PR00173 Glutamate-aspartate symporter signature 351 371 4.5E-13 T 01-11-2018 D3790_17740 ef94248de0bb5a52cd51f96a7c7cd21d 414 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 4.5E-13 T 01-11-2018 D3790_17740 ef94248de0bb5a52cd51f96a7c7cd21d 414 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 4.5E-13 T 01-11-2018 D3790_17740 ef94248de0bb5a52cd51f96a7c7cd21d 414 PRINTS PR00173 Glutamate-aspartate symporter signature 324 343 4.5E-13 T 01-11-2018 D3790_17740 ef94248de0bb5a52cd51f96a7c7cd21d 414 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 4.5E-13 T 01-11-2018 D3790_17740 ef94248de0bb5a52cd51f96a7c7cd21d 414 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 5 406 35.736 T 01-11-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 D3790_12600 676cb1efd34b31d5de677f909886277f 210 Pfam PF00857 Isochorismatase family 30 203 1.4E-38 T 01-11-2018 IPR000868 Isochorismatase-like GO:0003824 D3790_12600 676cb1efd34b31d5de677f909886277f 210 PRINTS PR01398 Isochorismatase signature 61 78 2.3E-35 T 01-11-2018 IPR016291 Isochorismatase GO:0008908 D3790_12600 676cb1efd34b31d5de677f909886277f 210 PRINTS PR01398 Isochorismatase signature 78 97 2.3E-35 T 01-11-2018 IPR016291 Isochorismatase GO:0008908 D3790_12600 676cb1efd34b31d5de677f909886277f 210 PRINTS PR01398 Isochorismatase signature 184 201 2.3E-35 T 01-11-2018 IPR016291 Isochorismatase GO:0008908 D3790_12600 676cb1efd34b31d5de677f909886277f 210 PRINTS PR01398 Isochorismatase signature 166 184 2.3E-35 T 01-11-2018 IPR016291 Isochorismatase GO:0008908 D3790_12600 676cb1efd34b31d5de677f909886277f 210 PRINTS PR01398 Isochorismatase signature 110 132 2.3E-35 T 01-11-2018 IPR016291 Isochorismatase GO:0008908 D3790_12600 676cb1efd34b31d5de677f909886277f 210 SUPERFAMILY SSF52499 3 208 3.01E-59 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 D3790_12600 676cb1efd34b31d5de677f909886277f 210 PIRSF PIRSF001111 1 210 2.8E-90 T 01-11-2018 IPR016291 Isochorismatase GO:0008908 D3790_12600 676cb1efd34b31d5de677f909886277f 210 Gene3D G3DSA:3.40.50.850 1 206 8.4E-72 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 D3790_18235 819a25a139efae823cd088ab8c11d896 415 Gene3D G3DSA:3.40.630.40 175 415 6.3E-92 T 01-11-2018 D3790_18235 819a25a139efae823cd088ab8c11d896 415 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 189 403 7.4E-51 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 D3790_18235 819a25a139efae823cd088ab8c11d896 415 Pfam PF11741 AMIN domain 39 142 3.6E-25 T 01-11-2018 IPR021731 AMIN domain D3790_18235 819a25a139efae823cd088ab8c11d896 415 Gene3D G3DSA:2.60.40.3500 26 145 1.7E-31 T 01-11-2018 D3790_18235 819a25a139efae823cd088ab8c11d896 415 SMART SM00646 249 403 2.3E-67 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 D3790_18235 819a25a139efae823cd088ab8c11d896 415 SUPERFAMILY SSF53187 187 406 1.54E-54 T 01-11-2018 D3790_13260 8ad66094c9b881db2828c5e4aa0db84c 128 SUPERFAMILY SSF55298 5 127 1.26E-43 T 01-11-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 D3790_13260 8ad66094c9b881db2828c5e4aa0db84c 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 4.1E-52 T 01-11-2018 IPR006056 RidA family Reactome: R-HSA-8849175 D3790_13260 8ad66094c9b881db2828c5e4aa0db84c 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 01-11-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 D3790_13260 8ad66094c9b881db2828c5e4aa0db84c 128 Pfam PF01042 Endoribonuclease L-PSP 7 126 3.1E-44 T 01-11-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 D3790_13260 8ad66094c9b881db2828c5e4aa0db84c 128 Gene3D G3DSA:3.30.1330.40 1 127 2.4E-48 T 01-11-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 D3790_13910 1a3becf2dbc8a78ab6213d10b3cb635e 420 Gene3D G3DSA:3.40.50.720 205 420 1.8E-57 T 01-11-2018 D3790_13910 1a3becf2dbc8a78ab6213d10b3cb635e 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 4.7E-19 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D3790_13910 1a3becf2dbc8a78ab6213d10b3cb635e 420 PIRSF PIRSF000124 4 418 2.4E-71 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 D3790_13910 1a3becf2dbc8a78ab6213d10b3cb635e 420 SUPERFAMILY SSF52413 310 419 6.67E-24 T 01-11-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 D3790_13910 1a3becf2dbc8a78ab6213d10b3cb635e 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 76.365 T 01-11-2018 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335 D3790_13910 1a3becf2dbc8a78ab6213d10b3cb635e 420 SUPERFAMILY SSF48179 206 298 6.63E-27 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D3790_13910 1a3becf2dbc8a78ab6213d10b3cb635e 420 SMART SM00984 324 420 1.2E-23 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D3790_13910 1a3becf2dbc8a78ab6213d10b3cb635e 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 1.2E-25 T 01-11-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D3790_13910 1a3becf2dbc8a78ab6213d10b3cb635e 420 SUPERFAMILY SSF51735 5 198 1.97E-43 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_13910 1a3becf2dbc8a78ab6213d10b3cb635e 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 2.4E-116 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 D3790_13910 1a3becf2dbc8a78ab6213d10b3cb635e 420 Gene3D G3DSA:3.40.50.720 2 204 8.5E-63 T 01-11-2018 D3790_13910 1a3becf2dbc8a78ab6213d10b3cb635e 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 188 1.6E-57 T 01-11-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D3790_13910 1a3becf2dbc8a78ab6213d10b3cb635e 420 PIRSF PIRSF500136 1 420 9.4E-146 T 01-11-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 D3790_04840 040ca1eb759376f6153f54afb7660a41 231 Gene3D G3DSA:1.10.150.240 27 89 4.1E-56 T 01-11-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D3790_04840 040ca1eb759376f6153f54afb7660a41 231 SUPERFAMILY SSF56784 13 212 7.59E-42 T 01-11-2018 IPR036412 HAD-like superfamily D3790_04840 040ca1eb759376f6153f54afb7660a41 231 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 15 190 1.3E-15 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D3790_04840 040ca1eb759376f6153f54afb7660a41 231 Gene3D G3DSA:3.40.50.1000 13 193 4.1E-56 T 01-11-2018 IPR023214 HAD superfamily D3790_04840 040ca1eb759376f6153f54afb7660a41 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 190 8.7E-25 T 01-11-2018 D3790_15280 ee1d2da0da91a1653e5951a725032ba8 341 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 285 318 - T 01-11-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 D3790_15280 ee1d2da0da91a1653e5951a725032ba8 341 Pfam PF00263 Bacterial type II and III secretion system protein 182 338 1.1E-44 T 01-11-2018 IPR004846 Type II/III secretion system GO:0009306 D3790_15280 ee1d2da0da91a1653e5951a725032ba8 341 PRINTS PR00811 Bacterial general secretion pathway protein D signature 327 341 5.9E-11 T 01-11-2018 IPR001775 GspD/PilQ family D3790_15280 ee1d2da0da91a1653e5951a725032ba8 341 PRINTS PR00811 Bacterial general secretion pathway protein D signature 178 202 5.9E-11 T 01-11-2018 IPR001775 GspD/PilQ family D3790_15280 ee1d2da0da91a1653e5951a725032ba8 341 PRINTS PR00811 Bacterial general secretion pathway protein D signature 304 322 5.9E-11 T 01-11-2018 IPR001775 GspD/PilQ family D3790_15280 ee1d2da0da91a1653e5951a725032ba8 341 Pfam PF03958 Bacterial type II/III secretion system short domain 49 113 1.1E-8 T 01-11-2018 IPR005644 NolW-like D3790_15280 ee1d2da0da91a1653e5951a725032ba8 341 Gene3D G3DSA:3.30.1370.120 28 115 4.0E-16 T 01-11-2018 IPR038591 NolW-like superfamily D3790_11690 17b4feaa5983cee22da12f5f21b0cde5 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 01-11-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D3790_11690 17b4feaa5983cee22da12f5f21b0cde5 159 Gene3D G3DSA:3.30.70.560 1 159 6.9E-58 T 01-11-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D3790_11690 17b4feaa5983cee22da12f5f21b0cde5 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 1.4E-35 T 01-11-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D3790_11690 17b4feaa5983cee22da12f5f21b0cde5 159 SUPERFAMILY SSF55083 1 158 2.22E-53 T 01-11-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D3790_11690 17b4feaa5983cee22da12f5f21b0cde5 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 7.3E-44 T 01-11-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D3790_06725 38f7fb743758ffaa0b078e20a287434a 368 Gene3D G3DSA:3.20.20.70 2 368 2.3E-135 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_06725 38f7fb743758ffaa0b078e20a287434a 368 SUPERFAMILY SSF51395 8 366 3.23E-121 T 01-11-2018 D3790_06725 38f7fb743758ffaa0b078e20a287434a 368 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 10 343 2.5E-89 T 01-11-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 D3790_02220 59752a64f9037ca406a6b516c4184a23 319 Gene3D G3DSA:3.30.200.100 220 318 1.5E-26 T 01-11-2018 IPR038484 MucB/RseB, C-terminal domain superfamily D3790_02220 59752a64f9037ca406a6b516c4184a23 319 Pfam PF03888 MucB/RseB N-terminal domain 28 207 1.2E-51 T 01-11-2018 IPR033434 MucB/RseB, N-terminal D3790_02220 59752a64f9037ca406a6b516c4184a23 319 Pfam PF17188 MucB/RseB C-terminal domain 221 313 1.1E-25 T 01-11-2018 IPR033436 MucB/RseB, C-terminal D3790_02220 59752a64f9037ca406a6b516c4184a23 319 Gene3D G3DSA:2.50.20.10 27 211 3.9E-46 T 01-11-2018 D3790_02220 59752a64f9037ca406a6b516c4184a23 319 PIRSF PIRSF005427 1 319 3.6E-69 T 01-11-2018 IPR005588 MucB/RseB D3790_10620 d884a362bd0ac8ecac542d81a051b6e7 306 Pfam PF00589 Phage integrase family 121 292 1.3E-55 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D3790_10620 d884a362bd0ac8ecac542d81a051b6e7 306 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 14 306 58.105 T 01-11-2018 IPR023009 Tyrosine recombinase XerC/XerD D3790_10620 d884a362bd0ac8ecac542d81a051b6e7 306 SUPERFAMILY SSF47823 13 108 7.06E-34 T 01-11-2018 D3790_10620 d884a362bd0ac8ecac542d81a051b6e7 306 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 16 98 1.3E-19 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 D3790_10620 d884a362bd0ac8ecac542d81a051b6e7 306 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 17 305 1.6E-115 T 01-11-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 D3790_10620 d884a362bd0ac8ecac542d81a051b6e7 306 SUPERFAMILY SSF56349 114 304 2.33E-57 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_10620 d884a362bd0ac8ecac542d81a051b6e7 306 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 12 306 61.413 T 01-11-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 D3790_10620 d884a362bd0ac8ecac542d81a051b6e7 306 Gene3D G3DSA:1.10.150.130 13 107 1.2E-17 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal D3790_10620 d884a362bd0ac8ecac542d81a051b6e7 306 Gene3D G3DSA:1.10.443.10 118 300 2.8E-78 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_07620 c5566fd36c7e186b0d9872af59c74d39 360 SMART SM00937 63 178 2.4E-71 T 01-11-2018 IPR005139 Peptide chain release factor GO:0006415 D3790_07620 c5566fd36c7e186b0d9872af59c74d39 360 Gene3D G3DSA:3.30.70.1660 111 342 4.1E-95 T 01-11-2018 D3790_07620 c5566fd36c7e186b0d9872af59c74d39 360 Pfam PF03462 PCRF domain 12 203 1.2E-75 T 01-11-2018 IPR005139 Peptide chain release factor GO:0006415 D3790_07620 c5566fd36c7e186b0d9872af59c74d39 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 01-11-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 D3790_07620 c5566fd36c7e186b0d9872af59c74d39 360 Gene3D G3DSA:1.20.58.410 4 101 1.2E-5 T 01-11-2018 D3790_07620 c5566fd36c7e186b0d9872af59c74d39 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 7.2E-175 T 01-11-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 D3790_07620 c5566fd36c7e186b0d9872af59c74d39 360 Gene3D G3DSA:3.30.160.20 210 297 4.1E-95 T 01-11-2018 D3790_07620 c5566fd36c7e186b0d9872af59c74d39 360 Pfam PF00472 RF-1 domain 216 321 8.3E-41 T 01-11-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 D3790_07620 c5566fd36c7e186b0d9872af59c74d39 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.118 T 01-11-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 D3790_07620 c5566fd36c7e186b0d9872af59c74d39 360 SUPERFAMILY SSF75620 12 353 1.7E-136 T 01-11-2018 D3790_06490 a847330a0dfa1324295eaa139d96d587 202 Gene3D G3DSA:3.40.50.10990 5 178 4.6E-75 T 01-11-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 D3790_06490 a847330a0dfa1324295eaa139d96d587 202 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 9 198 1.2E-90 T 01-11-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 D3790_06490 a847330a0dfa1324295eaa139d96d587 202 SUPERFAMILY SSF142695 7 177 8.24E-65 T 01-11-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 D3790_06490 a847330a0dfa1324295eaa139d96d587 202 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 5 200 47.942 T 01-11-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 D3790_06490 a847330a0dfa1324295eaa139d96d587 202 Pfam PF00925 GTP cyclohydrolase II 9 174 8.6E-66 T 01-11-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 D3790_18340 187147de155c1688cf22790bdfdbd7fa 108 Pfam PF04287 tRNA pseudouridine synthase C 7 103 3.8E-35 T 01-11-2018 IPR023376 YqcC-like domain D3790_18340 187147de155c1688cf22790bdfdbd7fa 108 PIRSF PIRSF006257 1 108 2.9E-38 T 01-11-2018 IPR007384 Protein of unknown function UCP006257 D3790_18340 187147de155c1688cf22790bdfdbd7fa 108 SUPERFAMILY SSF158452 1 107 8.89E-37 T 01-11-2018 IPR036814 YqcC-like superfamily D3790_18340 187147de155c1688cf22790bdfdbd7fa 108 Gene3D G3DSA:1.20.1440.40 1 105 1.2E-33 T 01-11-2018 IPR036814 YqcC-like superfamily D3790_13880 923be8aaf7bd58559d2d8f0f9be8e4c3 368 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 368 61.429 T 01-11-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 D3790_13880 923be8aaf7bd58559d2d8f0f9be8e4c3 368 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 363 3.7E-169 T 01-11-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 D3790_16850 00e8a468b7085582931cb3f02a4929a7 461 SUPERFAMILY SSF53187 41 458 1.89E-41 T 01-11-2018 D3790_16850 00e8a468b7085582931cb3f02a4929a7 461 Gene3D G3DSA:3.50.30.30 124 222 3.0E-6 T 01-11-2018 D3790_16850 00e8a468b7085582931cb3f02a4929a7 461 Pfam PF04389 Peptidase family M28 245 451 3.0E-30 T 01-11-2018 IPR007484 Peptidase M28 D3790_16850 00e8a468b7085582931cb3f02a4929a7 461 Gene3D G3DSA:3.40.630.10 223 460 1.9E-42 T 01-11-2018 D3790_16850 00e8a468b7085582931cb3f02a4929a7 461 Gene3D G3DSA:3.40.630.10 48 123 1.1E-7 T 01-11-2018 D3790_08395 0e3987b49d2f9230e89c0cfa5dca9bc7 303 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_08395 0e3987b49d2f9230e89c0cfa5dca9bc7 303 Pfam PF00005 ABC transporter 35 180 5.0E-29 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_08395 0e3987b49d2f9230e89c0cfa5dca9bc7 303 SUPERFAMILY SSF52540 11 243 1.48E-56 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_08395 0e3987b49d2f9230e89c0cfa5dca9bc7 303 Gene3D G3DSA:3.40.50.300 15 252 1.3E-59 T 01-11-2018 D3790_08395 0e3987b49d2f9230e89c0cfa5dca9bc7 303 SMART SM00382 42 258 5.2E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_14185 657897a65d161fc430b216f8fde06cf7 130 Pfam PF00410 Ribosomal protein S8 5 129 1.9E-48 T 01-11-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14185 657897a65d161fc430b216f8fde06cf7 130 Gene3D G3DSA:3.30.1490.10 73 130 3.6E-25 T 01-11-2018 D3790_14185 657897a65d161fc430b216f8fde06cf7 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 01-11-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14185 657897a65d161fc430b216f8fde06cf7 130 Gene3D G3DSA:3.30.1370.30 2 72 8.9E-29 T 01-11-2018 D3790_14185 657897a65d161fc430b216f8fde06cf7 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.574 T 01-11-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_14185 657897a65d161fc430b216f8fde06cf7 130 SUPERFAMILY SSF56047 2 129 2.22E-46 T 01-11-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_13295 aa753b9d3b85c15d800a33b28f72a8e5 172 Pfam PF00583 Acetyltransferase (GNAT) family 42 122 6.3E-6 T 01-11-2018 IPR000182 GNAT domain D3790_13295 aa753b9d3b85c15d800a33b28f72a8e5 172 SUPERFAMILY SSF55729 1 133 4.88E-20 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_13295 aa753b9d3b85c15d800a33b28f72a8e5 172 Gene3D G3DSA:3.40.630.30 1 169 5.8E-43 T 01-11-2018 D3790_09315 0be7f7c87d3cd2da045361a7a0fcc015 158 Pfam PF03748 Flagellar basal body-associated protein FliL 56 156 6.7E-21 T 01-11-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 D3790_16815 b19ebcc51453de216e73b1661359695b 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 16.358 T 01-11-2018 IPR007236 SlyX D3790_16815 b19ebcc51453de216e73b1661359695b 72 Pfam PF04102 SlyX 7 72 2.5E-22 T 01-11-2018 IPR007236 SlyX D3790_06015 d3fa697873275f0749c0f62bf2fb13e9 500 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 22 495 3.8E-219 T 01-11-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath D3790_06015 d3fa697873275f0749c0f62bf2fb13e9 500 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 71 495 2.9E-190 T 01-11-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath D3790_17245 253e6797065cf88e40c67a5d9bf1a8ab 405 Gene3D G3DSA:3.40.710.10 51 400 4.9E-112 T 01-11-2018 D3790_17245 253e6797065cf88e40c67a5d9bf1a8ab 405 SUPERFAMILY SSF56601 59 378 3.22E-66 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like D3790_17245 253e6797065cf88e40c67a5d9bf1a8ab 405 Pfam PF00144 Beta-lactamase 71 384 3.0E-63 T 01-11-2018 IPR001466 Beta-lactamase-related D3790_07665 50e7aa7ee13fb143cd2919a95744cbb7 462 Pfam PF07969 Amidohydrolase family 189 430 5.1E-10 T 01-11-2018 IPR013108 Amidohydrolase 3 D3790_07665 50e7aa7ee13fb143cd2919a95744cbb7 462 SUPERFAMILY SSF51556 117 410 7.12E-70 T 01-11-2018 IPR032466 Metal-dependent hydrolase D3790_07665 50e7aa7ee13fb143cd2919a95744cbb7 462 Gene3D G3DSA:2.30.40.10 78 454 3.1E-94 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D3790_07665 50e7aa7ee13fb143cd2919a95744cbb7 462 SUPERFAMILY SSF51338 70 124 5.55E-5 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D3790_07665 50e7aa7ee13fb143cd2919a95744cbb7 462 Gene3D G3DSA:3.20.20.140 117 414 3.1E-94 T 01-11-2018 D3790_04130 c325f14f5105a8c48eb7cfda92105f43 234 SUPERFAMILY SSF48317 26 212 1.57E-18 T 01-11-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily D3790_04130 c325f14f5105a8c48eb7cfda92105f43 234 SMART SM00014 90 210 1.0E-7 T 01-11-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase D3790_04130 c325f14f5105a8c48eb7cfda92105f43 234 Pfam PF01569 PAP2 superfamily 97 200 4.4E-11 T 01-11-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase D3790_04130 c325f14f5105a8c48eb7cfda92105f43 234 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 2 233 40.689 T 01-11-2018 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 Gene3D G3DSA:3.30.390.30 338 450 2.9E-47 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 1.9E-66 T 01-11-2018 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.9E-66 T 01-11-2018 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.9E-66 T 01-11-2018 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.9E-66 T 01-11-2018 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 1.9E-66 T 01-11-2018 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 1.9E-66 T 01-11-2018 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 1.9E-66 T 01-11-2018 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 1.9E-66 T 01-11-2018 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 1.9E-66 T 01-11-2018 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 318 5.7E-69 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 SUPERFAMILY SSF55424 336 450 7.39E-36 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 PIRSF PIRSF000350 1 447 7.3E-89 T 01-11-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 01-11-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 Gene3D G3DSA:3.50.50.60 144 261 1.7E-125 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 Gene3D G3DSA:3.50.50.60 5 318 1.7E-125 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 1.2E-214 T 01-11-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.9E-29 T 01-11-2018 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.9E-29 T 01-11-2018 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.9E-29 T 01-11-2018 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.9E-29 T 01-11-2018 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.9E-29 T 01-11-2018 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 2.4E-35 T 01-11-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 D3790_17030 e85d35ae9998ea503ac49cb3e2424726 451 SUPERFAMILY SSF51905 1 365 2.2E-59 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_11635 ee95516cdec0d816e463500114159f91 115 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 13 100 3.0E-36 T 01-11-2018 D3790_11635 ee95516cdec0d816e463500114159f91 115 Gene3D G3DSA:1.20.58.1630 23 115 7.5E-11 T 01-11-2018 IPR038432 PulS/OutS-like superfamily D3790_11635 ee95516cdec0d816e463500114159f91 115 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 22 105 1.1E-11 T 01-11-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like D3790_09310 65ebdd1b1a56b2a5ec8b34d910c315e1 455 Pfam PF02120 Flagellar hook-length control protein FliK 318 397 1.8E-20 T 01-11-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal D3790_09310 65ebdd1b1a56b2a5ec8b34d910c315e1 455 Gene3D G3DSA:3.30.750.140 296 409 1.1E-34 T 01-11-2018 IPR038610 FliK-like, C-terminal domain superfamily D3790_17755 5dc67ecd5ecab9250487f8948aa543d9 311 Pfam PF04393 Protein of unknown function (DUF535) 29 306 5.3E-99 T 01-11-2018 IPR007488 Protein of unknown function DUF535 D3790_07515 cc2307b64f0598e9bb5c6705dbab2e78 313 SUPERFAMILY SSF51735 100 279 1.3E-43 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_07515 cc2307b64f0598e9bb5c6705dbab2e78 313 Gene3D G3DSA:3.40.50.720 95 279 3.6E-104 T 01-11-2018 D3790_07515 cc2307b64f0598e9bb5c6705dbab2e78 313 Gene3D G3DSA:3.40.50.720 15 308 3.6E-104 T 01-11-2018 D3790_07515 cc2307b64f0598e9bb5c6705dbab2e78 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 278 3.1E-41 T 01-11-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 D3790_18820 c1d3d068e6296118d22b1f832b3076e5 135 SUPERFAMILY SSF47413 12 55 4.83E-8 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_18820 c1d3d068e6296118d22b1f832b3076e5 135 Gene3D G3DSA:1.10.260.40 6 80 7.1E-18 T 01-11-2018 D3790_18820 c1d3d068e6296118d22b1f832b3076e5 135 SMART SM00530 19 71 0.0069 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_18820 c1d3d068e6296118d22b1f832b3076e5 135 Pfam PF13560 Helix-turn-helix domain 19 54 2.3E-7 T 01-11-2018 D3790_17120 15c06dd89e8c9903da24abe81763451e 418 Pfam PF02264 LamB porin 24 418 2.8E-145 T 01-11-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 D3790_17120 15c06dd89e8c9903da24abe81763451e 418 Gene3D G3DSA:2.40.170.10 22 418 8.7E-166 T 01-11-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 D3790_17120 15c06dd89e8c9903da24abe81763451e 418 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 28 413 0.0 T 01-11-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 D3790_17120 15c06dd89e8c9903da24abe81763451e 418 SUPERFAMILY SSF56935 22 418 8.06E-145 T 01-11-2018 D3790_12660 92158c17be334d5cbde5210d62619a0e 177 Pfam PF01931 Protein of unknown function DUF84 7 165 2.0E-53 T 01-11-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 D3790_12660 92158c17be334d5cbde5210d62619a0e 177 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 28.812 T 01-11-2018 IPR002786 Non-canonical purine NTP phosphatase D3790_12660 92158c17be334d5cbde5210d62619a0e 177 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 170 3.0E-48 T 01-11-2018 IPR002786 Non-canonical purine NTP phosphatase D3790_12660 92158c17be334d5cbde5210d62619a0e 177 Gene3D G3DSA:3.90.950.10 1 176 2.6E-62 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D3790_12660 92158c17be334d5cbde5210d62619a0e 177 SUPERFAMILY SSF52972 1 169 3.05E-58 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D3790_10485 5f0c17912bafe1813f89ad8046b5bc27 93 TIGRFAM TIGR01165 cbiN: cobalt transport protein 1 84 7.3E-34 T 01-11-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 D3790_10485 5f0c17912bafe1813f89ad8046b5bc27 93 Hamap MF_00330 Cobalt transport protein CbiN [cbiN]. 1 93 40.022 T 01-11-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 D3790_10485 5f0c17912bafe1813f89ad8046b5bc27 93 Pfam PF02553 Cobalt transport protein component CbiN 5 69 2.4E-27 T 01-11-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 D3790_15815 a122651d2b684acf13452baeba08c586 140 Gene3D G3DSA:3.10.290.10 3 109 2.5E-37 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D3790_15815 a122651d2b684acf13452baeba08c586 140 PIRSF PIRSF016821 7 133 1.3E-40 T 01-11-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 D3790_15815 a122651d2b684acf13452baeba08c586 140 Pfam PF01479 S4 domain 10 56 6.7E-14 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_15815 a122651d2b684acf13452baeba08c586 140 SUPERFAMILY SSF55174 10 101 1.09E-29 T 01-11-2018 D3790_15815 a122651d2b684acf13452baeba08c586 140 SMART SM00363 10 73 1.6E-11 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D3790_07975 416c82ecaf891d653d39be8d69d2bffb 523 Pfam PF03050 Transposase IS66 family 187 472 5.7E-96 T 01-11-2018 IPR004291 Transposase, IS66 D3790_07975 416c82ecaf891d653d39be8d69d2bffb 523 Pfam PF13005 zinc-finger binding domain of transposase IS66 128 172 1.6E-14 T 01-11-2018 IPR024474 Zinc-finger binding domain of transposase IS66 D3790_07975 416c82ecaf891d653d39be8d69d2bffb 523 Pfam PF13007 Transposase C of IS166 homeodomain 46 120 1.5E-10 T 01-11-2018 IPR024463 Transposase TnpC, homeodomain D3790_07975 416c82ecaf891d653d39be8d69d2bffb 523 Pfam PF13817 IS66 C-terminal element 479 516 5.4E-15 T 01-11-2018 IPR039552 Transposase IS66, C-terminal D3790_11270 e4746d54bcf3fb0a6c246c22f02ec0e4 203 Pfam PF00510 Cytochrome c oxidase subunit III 15 201 2.1E-16 T 01-11-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_11270 e4746d54bcf3fb0a6c246c22f02ec0e4 203 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 24 203 2.2E-87 T 01-11-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 D3790_11270 e4746d54bcf3fb0a6c246c22f02ec0e4 203 SUPERFAMILY SSF81452 13 201 1.83E-58 T 01-11-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_11270 e4746d54bcf3fb0a6c246c22f02ec0e4 203 Gene3D G3DSA:1.20.120.80 18 203 4.7E-59 T 01-11-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_08665 13bdd91c07e91853e4ee6cf5a61d1017 65 ProDom PD054632 CRO REPRESSOR TRANSCRIPTION REGULATORY 3D-STRUCTURE DNA-BINDING DIRECT EARLY REGULATION SEQUENCING 1 61 1.0E-13 T 01-11-2018 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 D3790_08665 13bdd91c07e91853e4ee6cf5a61d1017 65 PIRSF PIRSF003217 1 64 5.4E-22 T 01-11-2018 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 D3790_08665 13bdd91c07e91853e4ee6cf5a61d1017 65 SUPERFAMILY SSF47413 1 62 3.94E-21 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_08665 13bdd91c07e91853e4ee6cf5a61d1017 65 Pfam PF09048 Cro 1 59 5.9E-30 T 01-11-2018 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 D3790_08665 13bdd91c07e91853e4ee6cf5a61d1017 65 Gene3D G3DSA:3.30.240.10 1 64 2.4E-28 T 01-11-2018 IPR038202 Regulatory protein cro superfamily D3790_05335 f8e1cf4b5a691f8d198bffe7de827b67 277 Pfam PF01471 Putative peptidoglycan binding domain 216 267 1.9E-8 T 01-11-2018 IPR002477 Peptidoglycan binding-like D3790_05335 f8e1cf4b5a691f8d198bffe7de827b67 277 SUPERFAMILY SSF47090 203 276 6.67E-20 T 01-11-2018 IPR036365 PGBD-like superfamily D3790_05335 f8e1cf4b5a691f8d198bffe7de827b67 277 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 45 181 7.5E-26 T 01-11-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D3790_05335 f8e1cf4b5a691f8d198bffe7de827b67 277 SMART SM00644 34 180 1.1E-21 T 01-11-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D3790_05335 f8e1cf4b5a691f8d198bffe7de827b67 277 SUPERFAMILY SSF55846 28 196 6.19E-49 T 01-11-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D3790_05335 f8e1cf4b5a691f8d198bffe7de827b67 277 Gene3D G3DSA:3.40.80.10 45 194 2.1E-47 T 01-11-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D3790_05335 f8e1cf4b5a691f8d198bffe7de827b67 277 Gene3D G3DSA:1.10.101.10 195 277 1.4E-27 T 01-11-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 D3790_11650 c1af30024c3d25f988b185f1c156d171 307 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_11650 c1af30024c3d25f988b185f1c156d171 307 Pfam PF00005 ABC transporter 21 165 2.5E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_11650 c1af30024c3d25f988b185f1c156d171 307 SMART SM00382 30 213 1.1E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_11650 c1af30024c3d25f988b185f1c156d171 307 SUPERFAMILY SSF52540 3 234 1.85E-62 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_11650 c1af30024c3d25f988b185f1c156d171 307 Gene3D G3DSA:3.40.50.300 1 238 3.0E-65 T 01-11-2018 D3790_14795 cab742f88f51a9aa931ce4493ca5a9b4 376 Pfam PF00534 Glycosyl transferases group 1 195 340 8.8E-28 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 D3790_14795 cab742f88f51a9aa931ce4493ca5a9b4 376 Gene3D G3DSA:3.40.50.2000 180 335 3.2E-100 T 01-11-2018 D3790_14795 cab742f88f51a9aa931ce4493ca5a9b4 376 Gene3D G3DSA:3.40.50.2000 15 179 3.2E-100 T 01-11-2018 D3790_14795 cab742f88f51a9aa931ce4493ca5a9b4 376 SUPERFAMILY SSF53756 5 373 1.26E-67 T 01-11-2018 D3790_14795 cab742f88f51a9aa931ce4493ca5a9b4 376 Pfam PF13439 Glycosyltransferase Family 4 17 181 1.5E-17 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D3790_01715 6a31ebc928297d8aea30e8c15714604f 201 Pfam PF03796 DnaB-like helicase C terminal domain 102 190 7.3E-34 T 01-11-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 D3790_01715 6a31ebc928297d8aea30e8c15714604f 201 SUPERFAMILY SSF52540 90 190 1.79E-12 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_01715 6a31ebc928297d8aea30e8c15714604f 201 Gene3D G3DSA:3.40.50.300 91 196 2.9E-30 T 01-11-2018 D3790_01715 6a31ebc928297d8aea30e8c15714604f 201 Pfam PF00872 Transposase, Mutator family 9 110 1.1E-15 T 01-11-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 D3790_00645 bb3d4b559b2771edac38aa16bd921b0f 276 Gene3D G3DSA:3.30.420.470 94 274 4.1E-19 T 01-11-2018 D3790_00645 bb3d4b559b2771edac38aa16bd921b0f 276 Pfam PF13358 DDE superfamily endonuclease 129 262 3.4E-32 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_00645 bb3d4b559b2771edac38aa16bd921b0f 276 Pfam PF01710 Transposase 1 103 4.9E-21 T 01-11-2018 IPR002622 Transposase, Synechocystis PCC 6803 D3790_06450 fe884d0ffcc5780caf5ce80c0de1d551 198 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 30 198 7.8E-61 T 01-11-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 D3790_06450 fe884d0ffcc5780caf5ce80c0de1d551 198 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 26 198 1.0E-77 T 01-11-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 D3790_06450 fe884d0ffcc5780caf5ce80c0de1d551 198 SUPERFAMILY SSF52540 9 198 1.89E-75 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_06450 fe884d0ffcc5780caf5ce80c0de1d551 198 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 1 23 6.8E-6 T 01-11-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 D3790_06450 fe884d0ffcc5780caf5ce80c0de1d551 198 PIRSF PIRSF015617 3 198 3.5E-69 T 01-11-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 D3790_06450 fe884d0ffcc5780caf5ce80c0de1d551 198 Gene3D G3DSA:3.40.50.300 8 198 3.0E-73 T 01-11-2018 D3790_15985 dd0622640147443bfcec0455f865b657 492 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 66 489 1.3E-177 T 01-11-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath D3790_15985 dd0622640147443bfcec0455f865b657 492 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 17 490 1.1E-211 T 01-11-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath D3790_16905 450cee5e54e36e548fad174897693ed1 488 Gene3D G3DSA:3.30.1360.60 2 78 7.6E-19 T 01-11-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 D3790_16905 450cee5e54e36e548fad174897693ed1 488 SUPERFAMILY SSF55604 8 80 1.22E-17 T 01-11-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 D3790_16905 450cee5e54e36e548fad174897693ed1 488 Pfam PF02378 Phosphotransferase system, EIIC 133 415 6.4E-31 T 01-11-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 D3790_16905 450cee5e54e36e548fad174897693ed1 488 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 01-11-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 D3790_16905 450cee5e54e36e548fad174897693ed1 488 Pfam PF00367 phosphotransferase system, EIIB 11 43 1.9E-11 T 01-11-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 SUPERFAMILY SSF69304 641 878 5.69E-6 T 01-11-2018 D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 Gene3D G3DSA:2.180.10.10 780 1325 6.7E-31 T 01-11-2018 D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 Gene3D G3DSA:3.90.930.1 522 664 2.4E-12 T 01-11-2018 D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 Pfam PF05488 PAAR motif 121 179 2.6E-16 T 01-11-2018 IPR008727 PAAR motif D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 1336 1435 1.4E-19 T 01-11-2018 IPR032871 AHH domain-containing protein D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 791 826 5.1E-5 T 01-11-2018 IPR006530 YD repeat D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 553 593 5.7E-6 T 01-11-2018 IPR006530 YD repeat D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 600 634 3.5E-7 T 01-11-2018 IPR006530 YD repeat D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 869 908 4.7E-5 T 01-11-2018 IPR006530 YD repeat D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1122 1160 4.7E-7 T 01-11-2018 IPR006530 YD repeat D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 660 696 0.0029 T 01-11-2018 IPR006530 YD repeat D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 621 658 0.0028 T 01-11-2018 IPR006530 YD repeat D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 828 867 7.1E-9 T 01-11-2018 IPR006530 YD repeat D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 Gene3D G3DSA:2.60.200.60 108 189 2.5E-23 T 01-11-2018 D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1258 1325 9.4E-21 T 01-11-2018 IPR022385 Rhs repeat-associated core GO:0097264 D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 Pfam PF05593 RHS Repeat 680 715 1.2E-4 T 01-11-2018 IPR031325 RHS repeat D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 Pfam PF05593 RHS Repeat 1122 1151 2.5E-5 T 01-11-2018 IPR031325 RHS repeat D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 Pfam PF05593 RHS Repeat 785 819 9.5E-5 T 01-11-2018 IPR031325 RHS repeat D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 Pfam PF05593 RHS Repeat 599 633 2.1E-7 T 01-11-2018 IPR031325 RHS repeat D3790_00850 a8e9f1a78ca257e67ebd009fc5b9a492 1476 Pfam PF05593 RHS Repeat 828 865 5.5E-10 T 01-11-2018 IPR031325 RHS repeat D3790_03760 e83f5c0855d35b5a42865ad146219185 241 Pfam PF04973 Nicotinamide mononucleotide transporter 23 227 1.2E-52 T 01-11-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 D3790_03760 e83f5c0855d35b5a42865ad146219185 241 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 23 230 2.7E-57 T 01-11-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 D3790_10550 65433dfcb5323662c165429d3d7a503b 462 SUPERFAMILY SSF52317 255 457 3.74E-31 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_10550 65433dfcb5323662c165429d3d7a503b 462 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 4 448 42.238 T 01-11-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 D3790_10550 65433dfcb5323662c165429d3d7a503b 462 Gene3D G3DSA:3.40.50.300 6 64 6.3E-7 T 01-11-2018 D3790_10550 65433dfcb5323662c165429d3d7a503b 462 Gene3D G3DSA:3.40.50.880 263 461 4.6E-9 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_10550 65433dfcb5323662c165429d3d7a503b 462 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 8 455 3.3E-132 T 01-11-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 D3790_10550 65433dfcb5323662c165429d3d7a503b 462 Gene3D G3DSA:3.40.50.300 66 198 7.1E-17 T 01-11-2018 D3790_10550 65433dfcb5323662c165429d3d7a503b 462 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 252 447 2.2E-41 T 01-11-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 D3790_10550 65433dfcb5323662c165429d3d7a503b 462 SUPERFAMILY SSF52540 6 200 3.13E-44 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_10550 65433dfcb5323662c165429d3d7a503b 462 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 190 1.2E-20 T 01-11-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain D3790_02735 e8139ceef84b3f00980c1e6a270c2567 335 Gene3D G3DSA:3.30.60.140 279 323 1.6E-8 T 01-11-2018 D3790_02735 e8139ceef84b3f00980c1e6a270c2567 335 PIRSF PIRSF037196 1 323 7.4E-155 T 01-11-2018 IPR017133 Pyoverdine chromophore biosynthesis protein PvcA D3790_02735 e8139ceef84b3f00980c1e6a270c2567 335 Pfam PF05141 Pyoverdine/dityrosine biosynthesis protein 46 300 1.8E-83 T 01-11-2018 IPR007817 Pyoverdine biosynthesis D3790_11075 f7cd357b35edf1fdb833771c9bf67e9f 286 Pfam PF01764 Lipase (class 3) 83 228 3.4E-14 T 01-11-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 D3790_11075 f7cd357b35edf1fdb833771c9bf67e9f 286 Gene3D G3DSA:3.40.50.1820 38 269 1.4E-26 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_11075 f7cd357b35edf1fdb833771c9bf67e9f 286 SUPERFAMILY SSF53474 11 258 1.85E-22 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_18835 0ce30b766a3858fd5c348d15b98ce687 322 TIGRFAM TIGR00749 glk: glucokinase 6 310 9.0E-126 T 01-11-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 D3790_18835 0ce30b766a3858fd5c348d15b98ce687 322 SUPERFAMILY SSF53067 4 318 1.51E-64 T 01-11-2018 D3790_18835 0ce30b766a3858fd5c348d15b98ce687 322 Pfam PF02685 Glucokinase 6 315 3.4E-122 T 01-11-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 D3790_18835 0ce30b766a3858fd5c348d15b98ce687 322 Gene3D G3DSA:3.40.367.20 100 299 5.8E-115 T 01-11-2018 D3790_18835 0ce30b766a3858fd5c348d15b98ce687 322 Hamap MF_00524 Glucokinase [glk]. 4 316 35.682 T 01-11-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 D3790_18835 0ce30b766a3858fd5c348d15b98ce687 322 Gene3D G3DSA:3.30.420.40 6 308 5.8E-115 T 01-11-2018 D3790_00465 da2aada39f030efc5f43a2763045ad8d 254 SUPERFAMILY SSF55205 4 241 1.64E-41 T 01-11-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 D3790_00465 da2aada39f030efc5f43a2763045ad8d 254 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 4 235 8.5E-36 T 01-11-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 D3790_00465 da2aada39f030efc5f43a2763045ad8d 254 Gene3D G3DSA:3.65.10.10 16 244 1.1E-45 T 01-11-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 D3790_09285 cd21d97528fb68022e7521f9278f9801 574 Gene3D G3DSA:3.30.300.30 124 226 2.9E-10 T 01-11-2018 D3790_09285 cd21d97528fb68022e7521f9278f9801 574 PIRSF PIRSF004862 3 574 3.8E-160 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 D3790_09285 cd21d97528fb68022e7521f9278f9801 574 Pfam PF01514 Secretory protein of YscJ/FliF family 34 222 3.1E-75 T 01-11-2018 IPR006182 Secretory protein YscJ/FliF D3790_09285 cd21d97528fb68022e7521f9278f9801 574 Pfam PF08345 Flagellar M-ring protein C-terminal 254 454 6.4E-46 T 01-11-2018 IPR013556 Flagellar M-ring C-terminal D3790_09285 cd21d97528fb68022e7521f9278f9801 574 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 8 573 1.3E-166 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 D3790_09285 cd21d97528fb68022e7521f9278f9801 574 PRINTS PR01009 Flagellar M-ring protein signature 123 141 8.8E-43 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 D3790_09285 cd21d97528fb68022e7521f9278f9801 574 PRINTS PR01009 Flagellar M-ring protein signature 379 403 8.8E-43 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 D3790_09285 cd21d97528fb68022e7521f9278f9801 574 PRINTS PR01009 Flagellar M-ring protein signature 155 169 8.8E-43 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 D3790_09285 cd21d97528fb68022e7521f9278f9801 574 PRINTS PR01009 Flagellar M-ring protein signature 198 216 8.8E-43 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 D3790_09285 cd21d97528fb68022e7521f9278f9801 574 PRINTS PR01009 Flagellar M-ring protein signature 267 285 8.8E-43 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 D3790_04755 fdd89bbba60666ac9d45274b27476ede 506 Pfam PF00361 Proton-conducting membrane transporter 133 430 6.0E-70 T 01-11-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04755 fdd89bbba60666ac9d45274b27476ede 506 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 495 1.2E-179 T 01-11-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04755 fdd89bbba60666ac9d45274b27476ede 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 3.5E-38 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04755 fdd89bbba60666ac9d45274b27476ede 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 3.5E-38 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04755 fdd89bbba60666ac9d45274b27476ede 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 3.5E-38 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04755 fdd89bbba60666ac9d45274b27476ede 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 3.5E-38 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04755 fdd89bbba60666ac9d45274b27476ede 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 3.5E-38 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_05000 c5c2e34b5469e6d347effd9f5dd705ed 280 SMART SM00518 3 279 2.7E-130 T 01-11-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 D3790_05000 c5c2e34b5469e6d347effd9f5dd705ed 280 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 43.345 T 01-11-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 D3790_05000 c5c2e34b5469e6d347effd9f5dd705ed 280 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 276 1.1E-108 T 01-11-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 D3790_05000 c5c2e34b5469e6d347effd9f5dd705ed 280 Pfam PF01261 Xylose isomerase-like TIM barrel 20 239 1.2E-42 T 01-11-2018 IPR013022 Xylose isomerase-like, TIM barrel domain D3790_05000 c5c2e34b5469e6d347effd9f5dd705ed 280 Gene3D G3DSA:3.20.20.150 1 280 5.5E-111 T 01-11-2018 D3790_05000 c5c2e34b5469e6d347effd9f5dd705ed 280 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 01-11-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 D3790_05000 c5c2e34b5469e6d347effd9f5dd705ed 280 SUPERFAMILY SSF51658 1 278 1.31E-100 T 01-11-2018 IPR036237 Xylose isomerase-like superfamily D3790_05000 c5c2e34b5469e6d347effd9f5dd705ed 280 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 01-11-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 D3790_11265 3b7c0a545c4fa8e7116960b59f99e5ad 110 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 13 108 3.8E-39 T 01-11-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 D3790_11265 3b7c0a545c4fa8e7116960b59f99e5ad 110 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 93 6.4E-19 T 01-11-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 D3790_12290 ceebe5c9adec89a5173229e55c3e26bc 424 Gene3D G3DSA:3.30.470.20 104 402 8.0E-67 T 01-11-2018 D3790_12290 ceebe5c9adec89a5173229e55c3e26bc 424 SUPERFAMILY SSF56059 107 326 3.36E-41 T 01-11-2018 D3790_12290 ceebe5c9adec89a5173229e55c3e26bc 424 Pfam PF13535 ATP-grasp domain 147 296 9.7E-20 T 01-11-2018 D3790_03295 a96e06a6e5c21f0a069f3f2ac9e71645 155 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 01-11-2018 IPR020549 Endoribonuclease YbeY, conserved site D3790_03295 a96e06a6e5c21f0a069f3f2ac9e71645 155 SUPERFAMILY SSF55486 3 150 7.08E-50 T 01-11-2018 D3790_03295 a96e06a6e5c21f0a069f3f2ac9e71645 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 145 1.9E-37 T 01-11-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 D3790_03295 a96e06a6e5c21f0a069f3f2ac9e71645 155 Gene3D G3DSA:3.40.390.30 1 155 1.6E-59 T 01-11-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 D3790_03295 a96e06a6e5c21f0a069f3f2ac9e71645 155 Pfam PF02130 Uncharacterized protein family UPF0054 20 143 5.6E-40 T 01-11-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 D3790_03295 a96e06a6e5c21f0a069f3f2ac9e71645 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 24.987 T 01-11-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 D3790_09160 5ed486fb1731f580c7fc1da6713330b4 204 SMART SM00530 29 82 6.0E-7 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_09160 5ed486fb1731f580c7fc1da6713330b4 204 Gene3D G3DSA:1.10.260.40 22 88 7.1E-10 T 01-11-2018 D3790_09160 5ed486fb1731f580c7fc1da6713330b4 204 SUPERFAMILY SSF47413 24 86 2.22E-8 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_09160 5ed486fb1731f580c7fc1da6713330b4 204 Pfam PF01381 Helix-turn-helix 41 82 1.8E-7 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_15455 f13f971624c328966d82da53ba10f880 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 1.5E-63 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15455 f13f971624c328966d82da53ba10f880 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 8.6E-29 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15455 f13f971624c328966d82da53ba10f880 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 8.6E-29 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15455 f13f971624c328966d82da53ba10f880 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 8.6E-29 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15455 f13f971624c328966d82da53ba10f880 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 8.6E-29 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15455 f13f971624c328966d82da53ba10f880 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 8.6E-29 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15455 f13f971624c328966d82da53ba10f880 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 01-11-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15455 f13f971624c328966d82da53ba10f880 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 1.9E-50 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15455 f13f971624c328966d82da53ba10f880 177 Gene3D G3DSA:1.10.520.20 2 106 4.2E-38 T 01-11-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15455 f13f971624c328966d82da53ba10f880 177 SUPERFAMILY SSF47928 3 104 3.4E-28 T 01-11-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_15455 f13f971624c328966d82da53ba10f880 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.681 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D3790_06440 89d1b89def2d37626cec729ce93d1a0f 206 Pfam PF01300 Telomere recombination 22 198 7.0E-47 T 01-11-2018 IPR006070 YrdC-like domain GO:0003725 D3790_06440 89d1b89def2d37626cec729ce93d1a0f 206 SUPERFAMILY SSF55821 1 204 4.27E-64 T 01-11-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily D3790_06440 89d1b89def2d37626cec729ce93d1a0f 206 Gene3D G3DSA:3.90.870.10 1 206 3.2E-70 T 01-11-2018 D3790_06440 89d1b89def2d37626cec729ce93d1a0f 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 202 1.3E-73 T 01-11-2018 IPR006070 YrdC-like domain GO:0003725 D3790_04790 1f8eac6f14fccc5d6c2be3577312aacd 454 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 19 431 1.2E-201 T 01-11-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04790 1f8eac6f14fccc5d6c2be3577312aacd 454 SUPERFAMILY SSF142984 256 338 3.92E-22 T 01-11-2018 D3790_04790 1f8eac6f14fccc5d6c2be3577312aacd 454 SMART SM00928 344 389 6.5E-22 T 01-11-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04790 1f8eac6f14fccc5d6c2be3577312aacd 454 SUPERFAMILY SSF142019 18 246 3.4E-85 T 01-11-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04790 1f8eac6f14fccc5d6c2be3577312aacd 454 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 180 195 - T 01-11-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04790 1f8eac6f14fccc5d6c2be3577312aacd 454 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 357 368 - T 01-11-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04790 1f8eac6f14fccc5d6c2be3577312aacd 454 Gene3D G3DSA:3.10.20.600 248 341 6.2E-29 T 01-11-2018 D3790_04790 1f8eac6f14fccc5d6c2be3577312aacd 454 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 347 429 9.1E-27 T 01-11-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04790 1f8eac6f14fccc5d6c2be3577312aacd 454 SUPERFAMILY SSF140490 341 434 1.57E-31 T 01-11-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04790 1f8eac6f14fccc5d6c2be3577312aacd 454 Gene3D G3DSA:3.40.50.11540 65 243 1.4E-78 T 01-11-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04790 1f8eac6f14fccc5d6c2be3577312aacd 454 Gene3D G3DSA:1.20.1440.230 342 440 9.5E-28 T 01-11-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04790 1f8eac6f14fccc5d6c2be3577312aacd 454 Pfam PF10531 SLBB domain 261 303 1.5E-6 T 01-11-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04790 1f8eac6f14fccc5d6c2be3577312aacd 454 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 60 232 6.7E-50 T 01-11-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04735 be45fe1e94be931bba17619df50b45c0 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 145 1.0E-33 T 01-11-2018 IPR002178 PTS EIIA type-2 domain D3790_04735 be45fe1e94be931bba17619df50b45c0 147 Gene3D G3DSA:3.40.930.10 1 146 3.0E-53 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 D3790_04735 be45fe1e94be931bba17619df50b45c0 147 SUPERFAMILY SSF55804 1 146 1.96E-38 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 D3790_04735 be45fe1e94be931bba17619df50b45c0 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 01-11-2018 IPR002178 PTS EIIA type-2 domain D3790_05815 15eb287b553cf67f4f22fd91b3cd47c3 177 Pfam PF13358 DDE superfamily endonuclease 14 148 1.0E-29 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_05815 15eb287b553cf67f4f22fd91b3cd47c3 177 Gene3D G3DSA:3.30.420.470 5 168 4.7E-12 T 01-11-2018 D3790_09155 d40346fe37241578e42a46c91ea58c6b 72 SUPERFAMILY SSF47413 4 71 4.16E-28 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_09155 d40346fe37241578e42a46c91ea58c6b 72 Gene3D G3DSA:1.10.260.40 2 72 8.0E-33 T 01-11-2018 D3790_09155 d40346fe37241578e42a46c91ea58c6b 72 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 71 2.9E-30 T 01-11-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain D3790_17515 00bbc9c0271ec9054d28d38ae9a98681 241 SMART SM00382 28 231 2.8E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_17515 00bbc9c0271ec9054d28d38ae9a98681 241 SUPERFAMILY SSF52540 3 236 1.06E-66 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_17515 00bbc9c0271ec9054d28d38ae9a98681 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 1.7E-121 T 01-11-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 D3790_17515 00bbc9c0271ec9054d28d38ae9a98681 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_17515 00bbc9c0271ec9054d28d38ae9a98681 241 Pfam PF00005 ABC transporter 20 166 2.3E-35 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_17515 00bbc9c0271ec9054d28d38ae9a98681 241 Gene3D G3DSA:3.40.50.300 2 241 2.0E-72 T 01-11-2018 D3790_17515 00bbc9c0271ec9054d28d38ae9a98681 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 3.6E-8 T 01-11-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal D3790_12205 9f0a3a81824e910764fc20f94c985675 289 Gene3D G3DSA:1.10.150.130 8 99 4.8E-6 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal D3790_12205 9f0a3a81824e910764fc20f94c985675 289 Pfam PF12835 Integrase 102 250 7.9E-57 T 01-11-2018 IPR024456 Integrase catalytic domain, putative D3790_12205 9f0a3a81824e910764fc20f94c985675 289 Pfam PF12834 Phage integrase, N-terminal 1 90 9.7E-31 T 01-11-2018 IPR024457 Putative integrase, N-terminal D3790_12205 9f0a3a81824e910764fc20f94c985675 289 SUPERFAMILY SSF56349 42 253 5.49E-13 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_05045 85ca3f62016159a5f49e2936cbf4f6ee 459 PIRSF PIRSF006060 7 454 6.2E-75 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D3790_05045 85ca3f62016159a5f49e2936cbf4f6ee 459 Gene3D G3DSA:1.20.1740.10 20 456 2.5E-69 T 01-11-2018 D3790_05045 85ca3f62016159a5f49e2936cbf4f6ee 459 Pfam PF13520 Amino acid permease 27 420 7.0E-35 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D3790_18855 720cee2b7b9a53fb53e6183461d7b790 212 SMART SM00953 34 178 8.6E-5 T 01-11-2018 IPR014914 RES domain D3790_18855 720cee2b7b9a53fb53e6183461d7b790 212 Pfam PF08808 RES domain 23 169 1.0E-19 T 01-11-2018 IPR014914 RES domain D3790_04860 fa910d018ad4b0f1ca8597be44ba97ba 246 Gene3D G3DSA:3.10.200.10 19 246 1.1E-79 T 01-11-2018 IPR036398 Alpha carbonic anhydrase domain superfamily D3790_04860 fa910d018ad4b0f1ca8597be44ba97ba 246 SUPERFAMILY SSF51069 25 245 2.62E-74 T 01-11-2018 IPR036398 Alpha carbonic anhydrase domain superfamily D3790_04860 fa910d018ad4b0f1ca8597be44ba97ba 246 Pfam PF00194 Eukaryotic-type carbonic anhydrase 25 245 7.4E-49 T 01-11-2018 IPR001148 Alpha carbonic anhydrase domain D3790_04860 fa910d018ad4b0f1ca8597be44ba97ba 246 SMART SM01057 26 245 2.5E-98 T 01-11-2018 IPR001148 Alpha carbonic anhydrase domain D3790_04860 fa910d018ad4b0f1ca8597be44ba97ba 246 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 115 131 - T 01-11-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 D3790_01135 3d9adcd2dfaa296aae694cd1b732fe3d 376 Pfam PF06969 HemN C-terminal domain 303 364 6.5E-11 T 01-11-2018 IPR010723 HemN, C-terminal D3790_01135 3d9adcd2dfaa296aae694cd1b732fe3d 376 SMART SM00729 6 223 2.2E-45 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D3790_01135 3d9adcd2dfaa296aae694cd1b732fe3d 376 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 1.2E-143 T 01-11-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 D3790_01135 3d9adcd2dfaa296aae694cd1b732fe3d 376 SUPERFAMILY SSF102114 5 376 7.32E-110 T 01-11-2018 D3790_01135 3d9adcd2dfaa296aae694cd1b732fe3d 376 Pfam PF04055 Radical SAM superfamily 11 176 4.2E-16 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D3790_01135 3d9adcd2dfaa296aae694cd1b732fe3d 376 Gene3D G3DSA:3.80.30.20 2 298 9.3E-98 T 01-11-2018 IPR023404 Radical SAM, alpha/beta horseshoe D3790_03435 2afc949544cc1bb136278bda80c34afe 59 Pfam PF03400 IS1 transposase 4 54 7.9E-13 T 01-11-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 D3790_07580 203a6af690e91e63cb9a1a8be2f4549b 364 Gene3D G3DSA:3.20.20.70 124 361 5.5E-20 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_07580 203a6af690e91e63cb9a1a8be2f4549b 364 SMART SM00729 125 339 8.3E-6 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D3790_07580 203a6af690e91e63cb9a1a8be2f4549b 364 Pfam PF04055 Radical SAM superfamily 134 291 1.2E-11 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D3790_07580 203a6af690e91e63cb9a1a8be2f4549b 364 TIGRFAM TIGR04043 rSAM_MSMEG_0568: radical SAM protein, MSMEG_0568 family 13 364 1.5E-176 T 01-11-2018 IPR016779 Radical SAM enzyme, MSMEG0568 D3790_07580 203a6af690e91e63cb9a1a8be2f4549b 364 SUPERFAMILY SSF102114 134 350 1.83E-30 T 01-11-2018 D3790_07580 203a6af690e91e63cb9a1a8be2f4549b 364 PIRSF PIRSF020870 6 364 5.2E-175 T 01-11-2018 IPR016779 Radical SAM enzyme, MSMEG0568 D3790_12045 7d7b145a8e416368f2a2a572e4033d81 264 Pfam PF03756 A-factor biosynthesis hotdog domain 95 225 1.5E-14 T 01-11-2018 IPR005509 A-factor biosynthesis hotdog domain D3790_10290 1d3c5ac633212e9ae681e0cdb80c92b6 364 Gene3D G3DSA:3.40.50.2000 178 347 1.2E-30 T 01-11-2018 D3790_10290 1d3c5ac633212e9ae681e0cdb80c92b6 364 SUPERFAMILY SSF53756 4 348 9.81E-48 T 01-11-2018 D3790_10290 1d3c5ac633212e9ae681e0cdb80c92b6 364 Pfam PF00534 Glycosyl transferases group 1 175 334 5.6E-25 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 D3790_10290 1d3c5ac633212e9ae681e0cdb80c92b6 364 Gene3D G3DSA:3.40.50.2000 1 177 7.1E-10 T 01-11-2018 D3790_05655 09b518c8742817b22c24281b00d8fc7e 327 SUPERFAMILY SSF143865 14 259 3.14E-48 T 01-11-2018 D3790_05655 09b518c8742817b22c24281b00d8fc7e 327 Pfam PF01544 CorA-like Mg2+ transporter protein 42 323 1.5E-59 T 01-11-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 D3790_05655 09b518c8742817b22c24281b00d8fc7e 327 Gene3D G3DSA:1.20.58.340 140 262 8.7E-38 T 01-11-2018 D3790_05655 09b518c8742817b22c24281b00d8fc7e 327 Gene3D G3DSA:1.20.58.340 270 327 2.1E-10 T 01-11-2018 D3790_05655 09b518c8742817b22c24281b00d8fc7e 327 SUPERFAMILY SSF144083 263 324 8.63E-13 T 01-11-2018 D3790_05655 09b518c8742817b22c24281b00d8fc7e 327 Gene3D G3DSA:3.30.460.20 1 139 1.0E-33 T 01-11-2018 D3790_01190 7de69493f6ffc12efa15adefbad92ab3 346 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 277 6.7E-122 T 01-11-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 D3790_01190 7de69493f6ffc12efa15adefbad92ab3 346 SUPERFAMILY SSF48150 4 226 2.83E-75 T 01-11-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 D3790_01190 7de69493f6ffc12efa15adefbad92ab3 346 Pfam PF00633 Helix-hairpin-helix motif 101 128 1.9E-7 T 01-11-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 D3790_01190 7de69493f6ffc12efa15adefbad92ab3 346 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 193 209 - T 01-11-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 D3790_01190 7de69493f6ffc12efa15adefbad92ab3 346 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 193 209 1.1E-4 T 01-11-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 D3790_01190 7de69493f6ffc12efa15adefbad92ab3 346 Gene3D G3DSA:3.90.79.10 223 346 1.9E-10 T 01-11-2018 D3790_01190 7de69493f6ffc12efa15adefbad92ab3 346 SMART SM00525 192 212 1.3E-4 T 01-11-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 D3790_01190 7de69493f6ffc12efa15adefbad92ab3 346 Pfam PF14815 NUDIX domain 234 343 3.3E-22 T 01-11-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 D3790_01190 7de69493f6ffc12efa15adefbad92ab3 346 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 167 1.6E-21 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 D3790_01190 7de69493f6ffc12efa15adefbad92ab3 346 Gene3D G3DSA:1.10.1670.10 11 212 3.9E-86 T 01-11-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 D3790_01190 7de69493f6ffc12efa15adefbad92ab3 346 SUPERFAMILY SSF55811 221 345 1.49E-23 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D3790_01190 7de69493f6ffc12efa15adefbad92ab3 346 SMART SM00478 40 191 1.9E-46 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 D3790_01190 7de69493f6ffc12efa15adefbad92ab3 346 Gene3D G3DSA:1.10.340.30 22 133 3.9E-86 T 01-11-2018 D3790_16055 8e48c2141e6570166eec107d2db43db3 316 Pfam PF13592 Winged helix-turn helix 103 161 1.1E-16 T 01-11-2018 IPR025959 Winged helix-turn helix domain D3790_16055 8e48c2141e6570166eec107d2db43db3 316 Pfam PF13384 Homeodomain-like domain 20 64 6.3E-11 T 01-11-2018 D3790_16055 8e48c2141e6570166eec107d2db43db3 316 Gene3D G3DSA:3.30.420.470 139 316 2.0E-16 T 01-11-2018 D3790_16055 8e48c2141e6570166eec107d2db43db3 316 Pfam PF13358 DDE superfamily endonuclease 176 315 3.8E-36 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_16055 8e48c2141e6570166eec107d2db43db3 316 SUPERFAMILY SSF46689 16 136 1.52E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_11850 91f4b265a97d81a38746d9970ad2bc02 346 Gene3D G3DSA:3.30.420.470 142 331 1.1E-10 T 01-11-2018 D3790_11850 91f4b265a97d81a38746d9970ad2bc02 346 SUPERFAMILY SSF46689 17 137 1.24E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_11850 91f4b265a97d81a38746d9970ad2bc02 346 Pfam PF13358 DDE superfamily endonuclease 177 310 2.0E-23 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_11850 91f4b265a97d81a38746d9970ad2bc02 346 Pfam PF13384 Homeodomain-like domain 28 72 1.4E-10 T 01-11-2018 D3790_05220 dbf3e19017ee14e4dcfb68ebfc1bfcb2 400 Pfam PF02687 FtsX-like permease family 296 393 3.6E-10 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 D3790_05220 dbf3e19017ee14e4dcfb68ebfc1bfcb2 400 Pfam PF12704 MacB-like periplasmic core domain 27 209 3.3E-12 T 01-11-2018 IPR025857 MacB-like periplasmic core domain D3790_05220 dbf3e19017ee14e4dcfb68ebfc1bfcb2 400 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 400 2.9E-134 T 01-11-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 D3790_18675 2e7b8447bab7d896f961447a9b5d3b5e 574 PIRSF PIRSF000719 1 574 1.2E-269 T 01-11-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 D3790_18675 2e7b8447bab7d896f961447a9b5d3b5e 574 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 41.796 T 01-11-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 D3790_18675 2e7b8447bab7d896f961447a9b5d3b5e 574 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 6 572 0.0 T 01-11-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 D3790_18675 2e7b8447bab7d896f961447a9b5d3b5e 574 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 2.2E-242 T 01-11-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 D3790_07320 7766bf4a242373f6e601f8f91e2e2780 120 Pfam PF00893 Small Multidrug Resistance protein 3 94 3.5E-23 T 01-11-2018 IPR000390 Small multidrug resistance protein family GO:0016021 D3790_07320 7766bf4a242373f6e601f8f91e2e2780 120 Gene3D G3DSA:1.10.3730.20 1 109 4.2E-28 T 01-11-2018 D3790_07320 7766bf4a242373f6e601f8f91e2e2780 120 SUPERFAMILY SSF103481 5 103 2.62E-16 T 01-11-2018 D3790_18850 c46d3b5a2f6dce50578f415fee6350cf 420 Pfam PF07350 Protein of unknown function (DUF1479) 16 419 1.7E-130 T 01-11-2018 IPR010856 Protein of unknown function DUF1479 D3790_18850 c46d3b5a2f6dce50578f415fee6350cf 420 SUPERFAMILY SSF51197 5 419 3.57E-137 T 01-11-2018 D3790_18850 c46d3b5a2f6dce50578f415fee6350cf 420 Gene3D G3DSA:2.60.120.330 1 420 1.3E-142 T 01-11-2018 IPR027443 Isopenicillin N synthase-like D3790_09800 030eab8f06fe508ac90e752903e53305 572 SUPERFAMILY SSF141523 329 488 5.36E-19 T 01-11-2018 IPR038063 L,D-transpeptidase catalytic domain-like D3790_09800 030eab8f06fe508ac90e752903e53305 572 Pfam PF01471 Putative peptidoglycan binding domain 243 302 4.1E-9 T 01-11-2018 IPR002477 Peptidoglycan binding-like D3790_09800 030eab8f06fe508ac90e752903e53305 572 SUPERFAMILY SSF47090 232 310 3.37E-13 T 01-11-2018 IPR036365 PGBD-like superfamily D3790_09800 030eab8f06fe508ac90e752903e53305 572 Pfam PF03734 L,D-transpeptidase catalytic domain 331 497 2.6E-28 T 01-11-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 D3790_02770 a820df8fd4249debf5692d297c75ff57 487 Gene3D G3DSA:3.30.1330.120 285 426 2.9E-205 T 01-11-2018 D3790_02770 a820df8fd4249debf5692d297c75ff57 487 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 13 482 1.3E-256 T 01-11-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 D3790_02770 a820df8fd4249debf5692d297c75ff57 487 SUPERFAMILY SSF103378 12 482 6.15E-161 T 01-11-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 D3790_02770 a820df8fd4249debf5692d297c75ff57 487 Gene3D G3DSA:1.10.4100.10 22 461 2.9E-205 T 01-11-2018 D3790_02770 a820df8fd4249debf5692d297c75ff57 487 Pfam PF03972 MmgE/PrpD family 18 465 2.0E-161 T 01-11-2018 IPR005656 MmgE/PrpD GO:0016829 D3790_06525 6a73f8825da9a7189ae3b8d8a17df13f 204 Pfam PF13358 DDE superfamily endonuclease 57 190 1.1E-30 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_06525 6a73f8825da9a7189ae3b8d8a17df13f 204 Gene3D G3DSA:3.30.420.470 20 202 4.5E-17 T 01-11-2018 D3790_15210 1ca4be5a666235ad69ebf54e608e7b10 84 SUPERFAMILY SSF53706 32 66 2.86E-8 T 01-11-2018 D3790_15210 1ca4be5a666235ad69ebf54e608e7b10 84 Gene3D G3DSA:2.20.25.90 41 80 1.9E-5 T 01-11-2018 D3790_15210 1ca4be5a666235ad69ebf54e608e7b10 84 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 41 69 5.9E-7 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_15210 1ca4be5a666235ad69ebf54e608e7b10 84 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 45 63 - T 01-11-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 D3790_13310 3a5dbf93708751d66674899daf2bd6fa 559 Pfam PF07694 5TMR of 5TMR-LYT 27 196 2.9E-57 T 01-11-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 D3790_13310 3a5dbf93708751d66674899daf2bd6fa 559 SMART SM00065 218 365 2.3E-4 T 01-11-2018 IPR003018 GAF domain GO:0005515 D3790_13310 3a5dbf93708751d66674899daf2bd6fa 559 Gene3D G3DSA:3.30.565.10 423 559 2.4E-13 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_13310 3a5dbf93708751d66674899daf2bd6fa 559 SUPERFAMILY SSF55874 426 557 1.26E-11 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3790_13310 3a5dbf93708751d66674899daf2bd6fa 559 Pfam PF06580 Histidine kinase 371 447 2.1E-23 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 D3790_13310 3a5dbf93708751d66674899daf2bd6fa 559 SUPERFAMILY SSF55781 248 357 6.28E-6 T 01-11-2018 D3790_13310 3a5dbf93708751d66674899daf2bd6fa 559 Pfam PF13492 GAF domain 243 355 3.2E-6 T 01-11-2018 IPR003018 GAF domain GO:0005515 D3790_15160 9b700b2fa1a0da8a199028fdc6d62083 466 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 21 442 5.5E-45 T 01-11-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 D3790_15160 9b700b2fa1a0da8a199028fdc6d62083 466 Gene3D G3DSA:1.10.4160.10 15 454 1.9E-28 T 01-11-2018 IPR038271 Purine-cytosine permease superfamily D3790_15160 9b700b2fa1a0da8a199028fdc6d62083 466 PIRSF PIRSF002744 1 466 2.0E-91 T 01-11-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 D3790_10015 ca8f304812ff2d2f29afd8b2d056b60d 245 Gene3D G3DSA:3.40.190.10 110 203 3.2E-83 T 01-11-2018 D3790_10015 ca8f304812ff2d2f29afd8b2d056b60d 245 SMART SM00062 24 245 3.6E-85 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3790_10015 ca8f304812ff2d2f29afd8b2d056b60d 245 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 243 6.6E-86 T 01-11-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 D3790_10015 ca8f304812ff2d2f29afd8b2d056b60d 245 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 47 60 - T 01-11-2018 IPR018313 Solute-binding protein family 3, conserved site D3790_10015 ca8f304812ff2d2f29afd8b2d056b60d 245 SMART SM00079 24 245 1.4E-5 T 01-11-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 D3790_10015 ca8f304812ff2d2f29afd8b2d056b60d 245 SUPERFAMILY SSF53850 1 244 9.43E-75 T 01-11-2018 D3790_10015 ca8f304812ff2d2f29afd8b2d056b60d 245 Gene3D G3DSA:3.40.190.10 27 242 3.2E-83 T 01-11-2018 D3790_10015 ca8f304812ff2d2f29afd8b2d056b60d 245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 244 1.8E-71 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3790_10005 9206cc5f1271d9abc7ab67432fab2a8a 300 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 135 297 4.0E-63 T 01-11-2018 IPR005642 Lysine exporter LysO D3790_10005 9206cc5f1271d9abc7ab67432fab2a8a 300 Pfam PF03956 Lysine exporter LysO 114 298 1.0E-55 T 01-11-2018 IPR005642 Lysine exporter LysO D3790_10880 d8efd308e3c524e34a747f37c00bba90 399 Pfam PF00482 Type II secretion system (T2SS), protein F 64 187 1.7E-27 T 01-11-2018 IPR018076 Type II secretion system F domain D3790_10880 d8efd308e3c524e34a747f37c00bba90 399 Pfam PF00482 Type II secretion system (T2SS), protein F 272 390 9.7E-26 T 01-11-2018 IPR018076 Type II secretion system F domain D3790_10880 d8efd308e3c524e34a747f37c00bba90 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 1.2E-13 T 01-11-2018 IPR003004 GspF/PilC family D3790_10880 d8efd308e3c524e34a747f37c00bba90 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 1.2E-13 T 01-11-2018 IPR003004 GspF/PilC family D3790_10880 d8efd308e3c524e34a747f37c00bba90 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 159 187 1.2E-13 T 01-11-2018 IPR003004 GspF/PilC family D3790_10880 d8efd308e3c524e34a747f37c00bba90 399 Gene3D G3DSA:1.20.81.30 55 166 1.4E-24 T 01-11-2018 D3790_10880 d8efd308e3c524e34a747f37c00bba90 399 Gene3D G3DSA:1.20.81.30 251 360 3.0E-17 T 01-11-2018 D3790_11580 4a8f0e6869d83b26e21e786c8858bf4a 267 Gene3D G3DSA:2.40.230.20 33 267 3.0E-13 T 01-11-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 D3790_11580 4a8f0e6869d83b26e21e786c8858bf4a 267 SUPERFAMILY SSF111364 39 266 1.83E-47 T 01-11-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 D3790_11580 4a8f0e6869d83b26e21e786c8858bf4a 267 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 66 266 1.1E-12 T 01-11-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 D3790_12295 caaab9f362015fea31c8cc8d5e88622a 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 7.8E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12295 caaab9f362015fea31c8cc8d5e88622a 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 70 81 7.8E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12295 caaab9f362015fea31c8cc8d5e88622a 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 7.8E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12295 caaab9f362015fea31c8cc8d5e88622a 242 SUPERFAMILY SSF51735 6 238 1.76E-65 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_12295 caaab9f362015fea31c8cc8d5e88622a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 1.7E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12295 caaab9f362015fea31c8cc8d5e88622a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.7E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12295 caaab9f362015fea31c8cc8d5e88622a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 1.7E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12295 caaab9f362015fea31c8cc8d5e88622a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 1.7E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12295 caaab9f362015fea31c8cc8d5e88622a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 220 1.7E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12295 caaab9f362015fea31c8cc8d5e88622a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 1.7E-37 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_12295 caaab9f362015fea31c8cc8d5e88622a 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D3790_12295 caaab9f362015fea31c8cc8d5e88622a 242 Gene3D G3DSA:3.40.50.720 2 240 1.8E-61 T 01-11-2018 D3790_12295 caaab9f362015fea31c8cc8d5e88622a 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 237 1.3E-51 T 01-11-2018 D3790_02790 407f2ab9d286e49a9ef05f337ee88350 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 306 1.3E-73 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D3790_02790 407f2ab9d286e49a9ef05f337ee88350 322 Gene3D G3DSA:3.40.50.1100 53 149 1.2E-118 T 01-11-2018 D3790_02790 407f2ab9d286e49a9ef05f337ee88350 322 Gene3D G3DSA:3.40.50.1100 16 310 1.2E-118 T 01-11-2018 D3790_02790 407f2ab9d286e49a9ef05f337ee88350 322 SUPERFAMILY SSF53686 6 314 2.88E-95 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D3790_16790 2a66fe963fecd85878c2cf3f58344299 95 SUPERFAMILY SSF75169 1 95 1.51E-28 T 01-11-2018 IPR027396 DsrEFH-like D3790_16790 2a66fe963fecd85878c2cf3f58344299 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 25.28 T 01-11-2018 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 D3790_16790 2a66fe963fecd85878c2cf3f58344299 95 Pfam PF04077 DsrH like protein 7 91 8.3E-29 T 01-11-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 D3790_16790 2a66fe963fecd85878c2cf3f58344299 95 Gene3D G3DSA:3.40.1260.10 1 95 8.0E-30 T 01-11-2018 IPR027396 DsrEFH-like D3790_16790 2a66fe963fecd85878c2cf3f58344299 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 2.9E-30 T 01-11-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 D3790_14550 e71a39c9a3ea4f5800110a3c663b27a0 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.947 T 01-11-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 D3790_14550 e71a39c9a3ea4f5800110a3c663b27a0 80 Gene3D G3DSA:1.20.5.340 1 79 9.9E-33 T 01-11-2018 D3790_14550 e71a39c9a3ea4f5800110a3c663b27a0 80 Pfam PF06005 Cell division protein ZapB 1 77 1.8E-28 T 01-11-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 D3790_15725 42d0b06a57dcc02dd877362662c26490 313 SUPERFAMILY SSF47240 30 273 1.09E-79 T 01-11-2018 IPR009078 Ferritin-like superfamily D3790_15725 42d0b06a57dcc02dd877362662c26490 313 Gene3D G3DSA:1.20.1260.10 3 312 1.2E-132 T 01-11-2018 IPR012347 Ferritin-like D3790_15725 42d0b06a57dcc02dd877362662c26490 313 Pfam PF05138 Phenylacetic acid catabolic protein 20 294 2.2E-99 T 01-11-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 D3790_15725 42d0b06a57dcc02dd877362662c26490 313 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 10 298 1.0E-154 T 01-11-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149 D3790_15265 e11d4796e22bd597f87abbe0c0abaa77 287 Pfam PF11104 Type IV pilus assembly protein PilM; 9 166 2.6E-9 T 01-11-2018 IPR005883 Type IV pilus assembly protein PilM D3790_15265 e11d4796e22bd597f87abbe0c0abaa77 287 SUPERFAMILY SSF53067 33 161 7.38E-6 T 01-11-2018 D3790_15265 e11d4796e22bd597f87abbe0c0abaa77 287 Gene3D G3DSA:3.30.1490.300 82 133 4.3E-8 T 01-11-2018 D3790_15265 e11d4796e22bd597f87abbe0c0abaa77 287 Gene3D G3DSA:3.30.420.40 8 169 4.3E-8 T 01-11-2018 D3790_16245 12f198937089d717dd333c0d7f88a840 268 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 22 268 7.2E-120 T 01-11-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 D3790_16245 12f198937089d717dd333c0d7f88a840 268 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_16245 12f198937089d717dd333c0d7f88a840 268 Gene3D G3DSA:3.40.50.300 20 266 1.5E-65 T 01-11-2018 D3790_16245 12f198937089d717dd333c0d7f88a840 268 SMART SM00382 46 240 2.7E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_16245 12f198937089d717dd333c0d7f88a840 268 SUPERFAMILY SSF52540 21 255 9.11E-60 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16245 12f198937089d717dd333c0d7f88a840 268 Pfam PF00005 ABC transporter 37 192 4.4E-35 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_05375 fd49854fe77d95421009d4fef4e6120e 382 SUPERFAMILY SSF103473 4 376 5.75E-53 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_05375 fd49854fe77d95421009d4fef4e6120e 382 Gene3D G3DSA:1.20.1250.20 2 376 3.2E-46 T 01-11-2018 D3790_05375 fd49854fe77d95421009d4fef4e6120e 382 Pfam PF07690 Major Facilitator Superfamily 8 321 8.6E-34 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_00930 d4975dc70d078be99903ef57377baa7e 118 PIRSF PIRSF020555 1 118 1.2E-41 T 01-11-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats D3790_00930 d4975dc70d078be99903ef57377baa7e 118 Pfam PF16068 Domain of unknown function (DUF4810) 26 110 2.6E-34 T 01-11-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats D3790_18590 8877ad16a15cf29d7efb42c90af02092 144 Pfam PF01844 HNH endonuclease 64 112 2.3E-7 T 01-11-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 D3790_12095 abf95b75c5d0a357cf7c7c00dbd36b8d 93 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 26 75 1.0E-11 T 01-11-2018 IPR010260 DNA-binding transcriptional activator AlpA D3790_04050 09ee7aa2f49fa0343d985ffafbecbed1 405 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 21 368 9.4E-94 T 01-11-2018 IPR018683 Domain of unknown function DUF2169 D3790_03560 09f5f51cbc52a742702bb6c1e7a18103 256 Gene3D G3DSA:3.40.50.1820 8 256 7.7E-70 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_03560 09f5f51cbc52a742702bb6c1e7a18103 256 Pfam PF00561 alpha/beta hydrolase fold 22 121 4.5E-20 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_03560 09f5f51cbc52a742702bb6c1e7a18103 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 102 1.2E-5 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_03560 09f5f51cbc52a742702bb6c1e7a18103 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 1.2E-5 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_03560 09f5f51cbc52a742702bb6c1e7a18103 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 1.2E-5 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_03560 09f5f51cbc52a742702bb6c1e7a18103 256 SUPERFAMILY SSF53474 6 256 5.1E-52 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_06305 be4e5db482f1d59edaeb1e8494f6cd9d 247 SUPERFAMILY SSF51197 100 226 4.67E-16 T 01-11-2018 D3790_06305 be4e5db482f1d59edaeb1e8494f6cd9d 247 Gene3D G3DSA:2.60.120.330 42 237 9.0E-53 T 01-11-2018 IPR027443 Isopenicillin N synthase-like D3790_06305 be4e5db482f1d59edaeb1e8494f6cd9d 247 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 75 225 1.2E-42 T 01-11-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 D3790_07130 2181948a7b3f0cf460fc3ca12e30c1e4 490 PIRSF PIRSF006060 21 489 7.4E-42 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D3790_07130 2181948a7b3f0cf460fc3ca12e30c1e4 490 Gene3D G3DSA:1.20.1740.10 26 479 6.8E-55 T 01-11-2018 D3790_07130 2181948a7b3f0cf460fc3ca12e30c1e4 490 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 28 489 4.6E-162 T 01-11-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 D3790_07130 2181948a7b3f0cf460fc3ca12e30c1e4 490 Pfam PF13520 Amino acid permease 31 455 1.2E-65 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D3790_13575 e9df2bbd4891e24573c045ae958877b9 139 Pfam PF02082 Transcriptional regulator 2 82 3.8E-24 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type D3790_13575 e9df2bbd4891e24573c045ae958877b9 139 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 127 2.8E-34 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type D3790_13575 e9df2bbd4891e24573c045ae958877b9 139 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 01-11-2018 IPR030489 Transcription regulator Rrf2-type, conserved site D3790_13575 e9df2bbd4891e24573c045ae958877b9 139 SUPERFAMILY SSF46785 2 129 5.96E-33 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_13575 e9df2bbd4891e24573c045ae958877b9 139 Gene3D G3DSA:1.10.10.10 1 135 1.4E-33 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_01140 e686863c96722a75859611081abbe767 183 SUPERFAMILY SSF52016 7 180 2.16E-40 T 01-11-2018 D3790_01140 e686863c96722a75859611081abbe767 183 Gene3D G3DSA:3.20.19.10 5 182 2.5E-45 T 01-11-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 D3790_01140 e686863c96722a75859611081abbe767 183 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 11 177 2.1E-34 T 01-11-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 D3790_01140 e686863c96722a75859611081abbe767 183 Pfam PF00694 Aconitase C-terminal domain 68 123 2.3E-17 T 01-11-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 D3790_13210 c9402236078d077c440fe3a8c8b3ac19 142 Gene3D G3DSA:1.20.1290.10 1 141 4.4E-35 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 D3790_13210 c9402236078d077c440fe3a8c8b3ac19 142 SUPERFAMILY SSF69118 2 138 8.77E-32 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 D3790_13210 c9402236078d077c440fe3a8c8b3ac19 142 Pfam PF02627 Carboxymuconolactone decarboxylase family 23 91 1.1E-8 T 01-11-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 D3790_16980 5ca199ef074fde43b4ec48255f1d1511 174 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 12 171 2.3E-48 T 01-11-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 D3790_16980 5ca199ef074fde43b4ec48255f1d1511 174 SUPERFAMILY SSF52540 11 172 6.46E-22 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16980 5ca199ef074fde43b4ec48255f1d1511 174 Gene3D G3DSA:2.20.25.120 56 88 4.1E-58 T 01-11-2018 D3790_16980 5ca199ef074fde43b4ec48255f1d1511 174 Gene3D G3DSA:3.40.50.300 13 168 4.1E-58 T 01-11-2018 D3790_16980 5ca199ef074fde43b4ec48255f1d1511 174 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 12 146 3.8E-48 T 01-11-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 D3790_04805 f667917f3ac3dd09bd8d261db286c139 224 SUPERFAMILY SSF56770 42 189 6.93E-64 T 01-11-2018 D3790_04805 f667917f3ac3dd09bd8d261db286c139 224 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 68 174 1.3E-21 T 01-11-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04805 f667917f3ac3dd09bd8d261db286c139 224 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 148 164 - T 01-11-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04805 f667917f3ac3dd09bd8d261db286c139 224 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 45 182 7.9E-69 T 01-11-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04805 f667917f3ac3dd09bd8d261db286c139 224 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 181 41.817 T 01-11-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04805 f667917f3ac3dd09bd8d261db286c139 224 Gene3D G3DSA:3.40.50.12280 24 192 8.3E-70 T 01-11-2018 D3790_07170 cca411f62654553f3c3186d0d4007e5c 106 Pfam PF07027 Protein of unknown function (DUF1318) 18 106 9.7E-31 T 01-11-2018 IPR008309 Uncharacterised conserved protein UCP025560 D3790_07170 cca411f62654553f3c3186d0d4007e5c 106 PIRSF PIRSF025560 1 106 4.0E-36 T 01-11-2018 IPR008309 Uncharacterised conserved protein UCP025560 D3790_18000 ce07f63318d375ce4526dd17c94d19ec 324 Gene3D G3DSA:2.40.320.10 4 207 7.7E-35 T 01-11-2018 D3790_18000 ce07f63318d375ce4526dd17c94d19ec 324 SUPERFAMILY SSF55154 5 219 8.34E-49 T 01-11-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 D3790_18000 ce07f63318d375ce4526dd17c94d19ec 324 SMART SM01118 5 210 6.4E-38 T 01-11-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 D3790_18000 ce07f63318d375ce4526dd17c94d19ec 324 Pfam PF01928 CYTH domain 7 204 3.2E-28 T 01-11-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 D3790_14710 2c0dc714b811a197efb45ec837f4624b 199 SUPERFAMILY SSF46689 6 76 4.05E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_14710 2c0dc714b811a197efb45ec837f4624b 199 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 01-11-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site D3790_14710 2c0dc714b811a197efb45ec837f4624b 199 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 199 40.385 T 01-11-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 D3790_14710 2c0dc714b811a197efb45ec837f4624b 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 62 2.1E-8 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D3790_14710 2c0dc714b811a197efb45ec837f4624b 199 SUPERFAMILY SSF48498 84 196 5.87E-7 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D3790_14710 2c0dc714b811a197efb45ec837f4624b 199 Gene3D G3DSA:1.10.357.10 10 199 1.8E-74 T 01-11-2018 D3790_00920 5bc768de34799a2c39d132e570fdbd93 348 Gene3D G3DSA:3.40.47.10 231 348 1.6E-11 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_00920 5bc768de34799a2c39d132e570fdbd93 348 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 261 344 8.1E-8 T 01-11-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 D3790_00920 5bc768de34799a2c39d132e570fdbd93 348 Gene3D G3DSA:3.40.47.10 1 196 3.4E-35 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_00920 5bc768de34799a2c39d132e570fdbd93 348 SUPERFAMILY SSF53901 2 193 6.02E-28 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_00920 5bc768de34799a2c39d132e570fdbd93 348 SUPERFAMILY SSF53901 178 347 9.6E-12 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_16350 be2fa434b2db17a4b0aa57c6f8db3d2f 120 Pfam PF10941 Protein of unknown function DUF2620 1 117 5.6E-47 T 01-11-2018 IPR021238 Protein of unknown function DUF2620 D3790_03090 610865a6a84cd5e77ae9ea3d0b2c72d6 223 SMART SM01144 28 220 5.4E-71 T 01-11-2018 IPR005636 DTW D3790_03090 610865a6a84cd5e77ae9ea3d0b2c72d6 223 Pfam PF03942 DTW domain 30 215 1.6E-43 T 01-11-2018 IPR005636 DTW D3790_01245 f4cd739046d2b84ea137ed45676252ca 295 Pfam PF13612 Transposase DDE domain 104 258 4.9E-78 T 01-11-2018 IPR025668 Transposase DDE domain D3790_14750 b001d1fd1aed85230ae61d9c7c43f8ea 334 SUPERFAMILY SSF53756 4 328 5.34E-58 T 01-11-2018 D3790_14750 b001d1fd1aed85230ae61d9c7c43f8ea 334 Gene3D G3DSA:3.40.50.2000 1 145 2.1E-18 T 01-11-2018 D3790_14750 b001d1fd1aed85230ae61d9c7c43f8ea 334 Gene3D G3DSA:3.40.50.2000 148 330 2.3E-32 T 01-11-2018 D3790_14750 b001d1fd1aed85230ae61d9c7c43f8ea 334 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 114 297 4.7E-24 T 01-11-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 D3790_10865 a49cd09b1bc6e056bf67ac5fc63821ce 180 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 30 167 1.1E-26 T 01-11-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D3790_10865 a49cd09b1bc6e056bf67ac5fc63821ce 180 SUPERFAMILY SSF55846 4 178 9.03E-62 T 01-11-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D3790_10865 a49cd09b1bc6e056bf67ac5fc63821ce 180 Gene3D G3DSA:3.40.80.10 2 180 2.5E-56 T 01-11-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D3790_10865 a49cd09b1bc6e056bf67ac5fc63821ce 180 SMART SM00644 16 166 4.6E-52 T 01-11-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D3790_14355 0f100d14f5dadce2e444d06c2a34498b 346 Pfam PF01565 FAD binding domain 22 148 4.8E-21 T 01-11-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 D3790_14355 0f100d14f5dadce2e444d06c2a34498b 346 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 209 333 1.3E-36 T 01-11-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D3790_14355 0f100d14f5dadce2e444d06c2a34498b 346 Gene3D G3DSA:3.30.465.10 73 222 5.5E-54 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 D3790_14355 0f100d14f5dadce2e444d06c2a34498b 346 SUPERFAMILY SSF56176 9 195 8.41E-41 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 D3790_14355 0f100d14f5dadce2e444d06c2a34498b 346 SUPERFAMILY SSF56194 206 344 5.89E-52 T 01-11-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D3790_14355 0f100d14f5dadce2e444d06c2a34498b 346 Gene3D G3DSA:3.30.43.10 8 71 1.6E-20 T 01-11-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 D3790_14355 0f100d14f5dadce2e444d06c2a34498b 346 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 334 2.7E-106 T 01-11-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D3790_14355 0f100d14f5dadce2e444d06c2a34498b 346 Gene3D G3DSA:3.90.78.10 223 346 4.0E-48 T 01-11-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D3790_14355 0f100d14f5dadce2e444d06c2a34498b 346 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 346 84.019 T 01-11-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D3790_11725 2eee5a339a74a4826941f23e245f3ad1 427 Gene3D G3DSA:3.90.1150.10 7 419 4.8E-180 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_11725 2eee5a339a74a4826941f23e245f3ad1 427 Gene3D G3DSA:3.40.640.10 69 317 4.8E-180 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_11725 2eee5a339a74a4826941f23e245f3ad1 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_11725 2eee5a339a74a4826941f23e245f3ad1 427 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 425 3.2E-201 T 01-11-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 D3790_11725 2eee5a339a74a4826941f23e245f3ad1 427 Pfam PF00202 Aminotransferase class-III 32 387 9.4E-76 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D3790_11725 2eee5a339a74a4826941f23e245f3ad1 427 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.793 T 01-11-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 D3790_11725 2eee5a339a74a4826941f23e245f3ad1 427 SUPERFAMILY SSF53383 2 425 2.56E-134 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_00635 4078db7de03050b834855056b2dda9ab 68 Gene3D G3DSA:1.10.238.160 9 65 5.8E-7 T 01-11-2018 D3790_00635 4078db7de03050b834855056b2dda9ab 68 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 10 58 1.2E-19 T 01-11-2018 IPR010260 DNA-binding transcriptional activator AlpA D3790_04535 843b8db4b0236212be0bed34d37fd0a3 572 Pfam PF00391 PEP-utilising enzyme, mobile domain 483 555 8.1E-22 T 01-11-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 D3790_04535 843b8db4b0236212be0bed34d37fd0a3 572 SUPERFAMILY SSF52009 453 557 7.72E-28 T 01-11-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 D3790_04535 843b8db4b0236212be0bed34d37fd0a3 572 Gene3D G3DSA:3.50.30.10 457 563 4.5E-32 T 01-11-2018 D3790_14740 c22211abbf4de58ac9e83acd3e84d136 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.6E-26 T 01-11-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14740 c22211abbf4de58ac9e83acd3e84d136 55 Pfam PF00471 Ribosomal protein L33 8 53 5.0E-18 T 01-11-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14740 c22211abbf4de58ac9e83acd3e84d136 55 SUPERFAMILY SSF57829 1 53 3.36E-20 T 01-11-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 D3790_14740 c22211abbf4de58ac9e83acd3e84d136 55 Gene3D G3DSA:2.20.28.120 1 55 1.2E-30 T 01-11-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14740 c22211abbf4de58ac9e83acd3e84d136 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.462 T 01-11-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14740 c22211abbf4de58ac9e83acd3e84d136 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 01-11-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14640 93c24a53676d0e3edb5bf203114ec41c 70 Pfam PF04606 Ogr/Delta-like zinc finger 8 54 1.7E-9 T 01-11-2018 IPR007684 Zinc finger, Ogr/Delta-type D3790_16515 dd5d1d3b6ea7ad40edd77790de7c5d54 52 TIGRFAM TIGR04495 RiPP_XyeA: putative rSAM-modified RiPP, XyeA family 2 51 9.3E-30 T 01-11-2018 IPR030990 Putative rSAM-modified RiPP, XyeA family D3790_02870 2f4e9a2c20deab2fdc990b899c197e94 351 Gene3D G3DSA:2.30.40.20 21 73 1.3E-63 T 01-11-2018 D3790_02870 2f4e9a2c20deab2fdc990b899c197e94 351 Gene3D G3DSA:3.30.70.270 4 164 1.3E-63 T 01-11-2018 D3790_02870 2f4e9a2c20deab2fdc990b899c197e94 351 SUPERFAMILY SSF100879 241 349 3.45E-25 T 01-11-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 D3790_02870 2f4e9a2c20deab2fdc990b899c197e94 351 Gene3D G3DSA:3.30.1490.100 237 351 4.0E-28 T 01-11-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 D3790_02870 2f4e9a2c20deab2fdc990b899c197e94 351 SUPERFAMILY SSF56672 1 233 4.71E-90 T 01-11-2018 D3790_02870 2f4e9a2c20deab2fdc990b899c197e94 351 Pfam PF11798 IMS family HHH motif 166 196 2.0E-6 T 01-11-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 D3790_02870 2f4e9a2c20deab2fdc990b899c197e94 351 Pfam PF00817 impB/mucB/samB family 7 154 2.7E-47 T 01-11-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 D3790_02870 2f4e9a2c20deab2fdc990b899c197e94 351 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 36.197 T 01-11-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 D3790_02870 2f4e9a2c20deab2fdc990b899c197e94 351 Gene3D G3DSA:1.10.150.20 166 228 2.2E-16 T 01-11-2018 D3790_02870 2f4e9a2c20deab2fdc990b899c197e94 351 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 337 4.3E-8 T 01-11-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 D3790_02360 feb3dd99664021adc3d0057e26840bab 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.8E-23 T 01-11-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 D3790_02360 feb3dd99664021adc3d0057e26840bab 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 5.0E-56 T 01-11-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 D3790_02360 feb3dd99664021adc3d0057e26840bab 107 Gene3D G3DSA:2.60.300.12 2 107 7.0E-37 T 01-11-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D3790_02360 feb3dd99664021adc3d0057e26840bab 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.5E-36 T 01-11-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 D3790_02360 feb3dd99664021adc3d0057e26840bab 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 37.878 T 01-11-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 D3790_02360 feb3dd99664021adc3d0057e26840bab 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 01-11-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 D3790_02360 feb3dd99664021adc3d0057e26840bab 107 SUPERFAMILY SSF89360 1 95 1.57E-32 T 01-11-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D3790_04015 a305763f7c797c547cc133f8aef3ca6b 342 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 99 1.1E-8 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 D3790_04015 a305763f7c797c547cc133f8aef3ca6b 342 Pfam PF00589 Phage integrase family 122 294 6.1E-40 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D3790_04015 a305763f7c797c547cc133f8aef3ca6b 342 Gene3D G3DSA:1.10.443.10 120 303 4.5E-53 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_04015 a305763f7c797c547cc133f8aef3ca6b 342 SUPERFAMILY SSF56349 5 300 3.24E-51 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_04015 a305763f7c797c547cc133f8aef3ca6b 342 Gene3D G3DSA:1.10.150.130 2 118 1.0E-20 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal D3790_03080 1ba8caf167c047da0bd9371590e14ddc 452 Pfam PF13091 PLD-like domain 257 398 1.2E-19 T 01-11-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 D3790_03080 1ba8caf167c047da0bd9371590e14ddc 452 PIRSF PIRSF000850 1 452 2.9E-234 T 01-11-2018 D3790_03080 1ba8caf167c047da0bd9371590e14ddc 452 Gene3D G3DSA:3.30.870.10 25 233 2.7E-174 T 01-11-2018 D3790_03080 1ba8caf167c047da0bd9371590e14ddc 452 SUPERFAMILY SSF56024 255 408 3.92E-18 T 01-11-2018 D3790_03080 1ba8caf167c047da0bd9371590e14ddc 452 SMART SM00155 134 160 0.0038 T 01-11-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 D3790_03080 1ba8caf167c047da0bd9371590e14ddc 452 SMART SM00155 353 380 0.0027 T 01-11-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 D3790_03080 1ba8caf167c047da0bd9371590e14ddc 452 Gene3D G3DSA:3.30.870.10 19 448 2.7E-174 T 01-11-2018 D3790_03080 1ba8caf167c047da0bd9371590e14ddc 452 SUPERFAMILY SSF56024 8 194 3.45E-25 T 01-11-2018 D3790_17240 83ab010dc75487b8d7fe528a67326411 359 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 355 1.2E-68 T 01-11-2018 IPR005495 Permease LptG/LptF-related GO:0016021 D3790_17240 83ab010dc75487b8d7fe528a67326411 359 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 356 1.6E-133 T 01-11-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 D3790_12435 019879e5877b135c25b014a1ccd011a2 346 SUPERFAMILY SSF46689 27 140 9.32E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_12435 019879e5877b135c25b014a1ccd011a2 346 Gene3D G3DSA:3.30.420.470 145 340 5.2E-12 T 01-11-2018 D3790_12435 019879e5877b135c25b014a1ccd011a2 346 SUPERFAMILY SSF53098 207 311 8.85E-7 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_12435 019879e5877b135c25b014a1ccd011a2 346 Pfam PF13551 Winged helix-turn helix 30 79 2.3E-9 T 01-11-2018 D3790_12435 019879e5877b135c25b014a1ccd011a2 346 Pfam PF13358 DDE superfamily endonuclease 177 310 1.7E-26 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_09445 95454f908d769e4110c30ce5135b009b 274 SUPERFAMILY SSF53335 41 274 1.99E-43 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_09445 95454f908d769e4110c30ce5135b009b 274 Gene3D G3DSA:3.40.50.150 25 270 3.1E-40 T 01-11-2018 D3790_09445 95454f908d769e4110c30ce5135b009b 274 Pfam PF08241 Methyltransferase domain 66 164 4.9E-18 T 01-11-2018 IPR013216 Methyltransferase type 11 GO:0008168 D3790_13505 ff84fa24df98623c6601adf9bcce05e3 185 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 23 181 2.4E-74 T 01-11-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ D3790_13505 ff84fa24df98623c6601adf9bcce05e3 185 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 183 1.5E-81 T 01-11-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ D3790_15215 9ea3d64aaa5dc06efd65b2aa66979e97 276 SUPERFAMILY SSF53927 22 275 1.99E-76 T 01-11-2018 IPR016193 Cytidine deaminase-like GO:0003824 D3790_15215 9ea3d64aaa5dc06efd65b2aa66979e97 276 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 34 274 1.7E-84 T 01-11-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 D3790_15215 9ea3d64aaa5dc06efd65b2aa66979e97 276 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 13 275 31.881 T 01-11-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 D3790_15215 9ea3d64aaa5dc06efd65b2aa66979e97 276 PIRSF PIRSF015626 6 276 6.4E-77 T 01-11-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 D3790_15215 9ea3d64aaa5dc06efd65b2aa66979e97 276 Gene3D G3DSA:3.10.20.10 40 126 2.4E-8 T 01-11-2018 D3790_15215 9ea3d64aaa5dc06efd65b2aa66979e97 276 Gene3D G3DSA:3.40.140.10 128 276 4.8E-43 T 01-11-2018 D3790_15215 9ea3d64aaa5dc06efd65b2aa66979e97 276 Pfam PF02634 FdhD/NarQ family 38 274 5.0E-68 T 01-11-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 D3790_01775 2d1d80fbacdba88c8b5e2e889d88c3cf 98 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 6 81 5.7E-12 T 01-11-2018 IPR009610 CbtA toxin of type IV toxin-antitoxin system D3790_15700 ad2f5f18032587f34188483474030c6b 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 D3790_15700 ad2f5f18032587f34188483474030c6b 257 Gene3D G3DSA:1.10.12.10 200 256 4.1E-22 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal D3790_15700 ad2f5f18032587f34188483474030c6b 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 256 1.2E-73 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 D3790_15700 ad2f5f18032587f34188483474030c6b 257 Gene3D G3DSA:3.90.226.10 2 198 7.1E-73 T 01-11-2018 D3790_15700 ad2f5f18032587f34188483474030c6b 257 SUPERFAMILY SSF52096 1 256 3.26E-85 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily D3790_14070 0d6073dfb5f15c50ef16ae8f7f19b248 90 SUPERFAMILY SSF160272 1 83 1.06E-26 T 01-11-2018 IPR036692 Shew3726-like superfamily D3790_14070 0d6073dfb5f15c50ef16ae8f7f19b248 90 Pfam PF07369 Protein of unknown function (DUF1488) 5 81 1.5E-21 T 01-11-2018 IPR009962 Protein of unknown function DUF1488 D3790_14070 0d6073dfb5f15c50ef16ae8f7f19b248 90 Gene3D G3DSA:3.30.160.140 1 83 2.6E-20 T 01-11-2018 IPR036692 Shew3726-like superfamily D3790_15580 5e8bbd87e5f34d5522dd2c69c1c3de89 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 01-11-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_15580 5e8bbd87e5f34d5522dd2c69c1c3de89 46 Pfam PF00468 Ribosomal protein L34 1 44 2.8E-24 T 01-11-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_15580 5e8bbd87e5f34d5522dd2c69c1c3de89 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 7.0E-15 T 01-11-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_15580 5e8bbd87e5f34d5522dd2c69c1c3de89 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.121 T 01-11-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_15580 5e8bbd87e5f34d5522dd2c69c1c3de89 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 8.9E-27 T 01-11-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14540 436d00773001c4af4d4f46726946ea54 305 Pfam PF01040 UbiA prenyltransferase family 27 278 5.3E-41 T 01-11-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 D3790_14540 436d00773001c4af4d4f46726946ea54 305 PIRSF PIRSF005355 1 305 3.2E-92 T 01-11-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 D3790_14540 436d00773001c4af4d4f46726946ea54 305 Gene3D G3DSA:1.20.120.1780 199 305 3.8E-5 T 01-11-2018 D3790_14540 436d00773001c4af4d4f46726946ea54 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 9 302 21.703 T 01-11-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 D3790_14540 436d00773001c4af4d4f46726946ea54 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 18 301 8.5E-124 T 01-11-2018 D3790_17730 3db5875f8e4c9b235c73417e04667b22 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 8 101 4.8E-33 T 01-11-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 D3790_11545 3cdf8f9a064adc3be380c7ddc65f40d2 309 SMART SM00244 22 180 5.4E-62 T 01-11-2018 IPR001107 Band 7 domain D3790_11545 3cdf8f9a064adc3be380c7ddc65f40d2 309 Gene3D G3DSA:3.30.479.30 50 182 1.5E-43 T 01-11-2018 D3790_11545 3cdf8f9a064adc3be380c7ddc65f40d2 309 SUPERFAMILY SSF117892 53 187 3.92E-41 T 01-11-2018 IPR036013 Band 7/SPFH domain superfamily D3790_11545 3cdf8f9a064adc3be380c7ddc65f40d2 309 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 01-11-2018 IPR018080 Band 7/stomatin-like, conserved site D3790_11545 3cdf8f9a064adc3be380c7ddc65f40d2 309 Pfam PF01145 SPFH domain / Band 7 family 26 195 2.2E-34 T 01-11-2018 IPR001107 Band 7 domain D3790_11545 3cdf8f9a064adc3be380c7ddc65f40d2 309 PRINTS PR00721 Stomatin signature 77 98 2.0E-27 T 01-11-2018 IPR001972 Stomatin family GO:0016020 D3790_11545 3cdf8f9a064adc3be380c7ddc65f40d2 309 PRINTS PR00721 Stomatin signature 175 196 2.0E-27 T 01-11-2018 IPR001972 Stomatin family GO:0016020 D3790_11545 3cdf8f9a064adc3be380c7ddc65f40d2 309 PRINTS PR00721 Stomatin signature 112 129 2.0E-27 T 01-11-2018 IPR001972 Stomatin family GO:0016020 D3790_11545 3cdf8f9a064adc3be380c7ddc65f40d2 309 PRINTS PR00721 Stomatin signature 156 174 2.0E-27 T 01-11-2018 IPR001972 Stomatin family GO:0016020 D3790_11545 3cdf8f9a064adc3be380c7ddc65f40d2 309 PRINTS PR00721 Stomatin signature 132 155 2.0E-27 T 01-11-2018 IPR001972 Stomatin family GO:0016020 D3790_11180 afdc57f7175ee1ac5a75fc7e6e3d7f96 163 SUPERFAMILY SSF46689 46 92 2.87E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_11180 afdc57f7175ee1ac5a75fc7e6e3d7f96 163 Pfam PF01527 Transposase 48 94 1.2E-12 T 01-11-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D3790_17815 98ef9e2b2eae6ab2bdab160f2efbb67a 78 Pfam PF10963 Phage tail assembly chaperone 1 78 1.4E-32 T 01-11-2018 IPR024406 Phage tail assembly chaperone TAC-10 D3790_17815 98ef9e2b2eae6ab2bdab160f2efbb67a 78 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 1 77 1.0E-17 T 01-11-2018 IPR024406 Phage tail assembly chaperone TAC-10 D3790_14735 51b46a430273e2948e4b3e0b0e207093 78 Gene3D G3DSA:2.30.170.40 2 78 9.3E-33 T 01-11-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14735 51b46a430273e2948e4b3e0b0e207093 78 SUPERFAMILY SSF143800 2 77 2.16E-29 T 01-11-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14735 51b46a430273e2948e4b3e0b0e207093 78 Pfam PF00830 Ribosomal L28 family 3 62 7.9E-25 T 01-11-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_14735 51b46a430273e2948e4b3e0b0e207093 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 1.4E-26 T 01-11-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_14735 51b46a430273e2948e4b3e0b0e207093 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 20.704 T 01-11-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_03575 02494c7f82b79dbabd2ac3257730b979 340 PIRSF PIRSF019543 1 320 3.3E-35 T 01-11-2018 IPR014503 Clavaminate synthase-like GO:0005506|GO:0016491|GO:0055114 D3790_03575 02494c7f82b79dbabd2ac3257730b979 340 Gene3D G3DSA:3.60.130.10 4 319 1.5E-59 T 01-11-2018 D3790_03575 02494c7f82b79dbabd2ac3257730b979 340 SUPERFAMILY SSF51197 64 315 1.74E-28 T 01-11-2018 D3790_03575 02494c7f82b79dbabd2ac3257730b979 340 Pfam PF08943 CsiD 133 317 4.4E-8 T 01-11-2018 IPR015038 Uncharacterised protein family CsiD GO:0005506 D3790_03700 677b47eb9cc981ece5d5382dfa9819b1 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 360 5.8E-107 T 01-11-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 D3790_03700 677b47eb9cc981ece5d5382dfa9819b1 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 1.2E-187 T 01-11-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 D3790_03700 677b47eb9cc981ece5d5382dfa9819b1 379 PIRSF PIRSF000267 2 378 2.6E-129 T 01-11-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 D3790_18080 864b9e33243abbe79cc651e0cad717db 161 SUPERFAMILY SSF53597 1 160 4.97E-56 T 01-11-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 D3790_18080 864b9e33243abbe79cc651e0cad717db 161 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 01-11-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 D3790_18080 864b9e33243abbe79cc651e0cad717db 161 Pfam PF00186 Dihydrofolate reductase 3 159 2.9E-57 T 01-11-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 D3790_18080 864b9e33243abbe79cc651e0cad717db 161 PIRSF PIRSF000194 1 161 5.5E-57 T 01-11-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 D3790_18080 864b9e33243abbe79cc651e0cad717db 161 Gene3D G3DSA:3.40.430.10 2 161 2.2E-56 T 01-11-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 D3790_18080 864b9e33243abbe79cc651e0cad717db 161 PRINTS PR00070 Dihydrofolate reductase signature 91 105 4.5E-13 T 01-11-2018 D3790_18080 864b9e33243abbe79cc651e0cad717db 161 PRINTS PR00070 Dihydrofolate reductase signature 14 24 4.5E-13 T 01-11-2018 D3790_18080 864b9e33243abbe79cc651e0cad717db 161 PRINTS PR00070 Dihydrofolate reductase signature 41 52 4.5E-13 T 01-11-2018 D3790_18080 864b9e33243abbe79cc651e0cad717db 161 PRINTS PR00070 Dihydrofolate reductase signature 28 36 4.5E-13 T 01-11-2018 D3790_01950 e243b5fb190a89b68b1d634b3315a7b5 390 PIRSF PIRSF037118 1 390 1.1E-158 T 01-11-2018 IPR017115 Tellurite resistance, TerA D3790_01950 e243b5fb190a89b68b1d634b3315a7b5 390 Pfam PF02342 TerD domain 26 159 2.4E-26 T 01-11-2018 IPR003325 TerD domain D3790_01950 e243b5fb190a89b68b1d634b3315a7b5 390 Gene3D G3DSA:2.60.60.30 17 158 1.2E-30 T 01-11-2018 D3790_10265 4bb79fb6002768d8ba747eb817934eef 1000 Pfam PF07993 Male sterility protein 622 868 2.7E-64 T 01-11-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 D3790_10265 4bb79fb6002768d8ba747eb817934eef 1000 ProSitePatterns PS00455 Putative AMP-binding domain signature. 143 154 - T 01-11-2018 IPR020845 AMP-binding, conserved site D3790_10265 4bb79fb6002768d8ba747eb817934eef 1000 Gene3D G3DSA:3.40.50.720 589 998 3.5E-95 T 01-11-2018 D3790_10265 4bb79fb6002768d8ba747eb817934eef 1000 SUPERFAMILY SSF51735 620 921 4.36E-39 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_10265 4bb79fb6002768d8ba747eb817934eef 1000 SUPERFAMILY SSF56801 5 522 2.75E-113 T 01-11-2018 D3790_10265 4bb79fb6002768d8ba747eb817934eef 1000 SUPERFAMILY SSF47336 507 576 3.01E-13 T 01-11-2018 IPR036736 ACP-like superfamily D3790_10265 4bb79fb6002768d8ba747eb817934eef 1000 Gene3D G3DSA:3.30.300.30 397 502 4.9E-24 T 01-11-2018 D3790_10265 4bb79fb6002768d8ba747eb817934eef 1000 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 620 994 3.3E-89 T 01-11-2018 IPR010080 Thioester reductase-like domain D3790_10265 4bb79fb6002768d8ba747eb817934eef 1000 Gene3D G3DSA:1.10.1200.10 509 580 1.6E-14 T 01-11-2018 IPR036736 ACP-like superfamily D3790_10265 4bb79fb6002768d8ba747eb817934eef 1000 Pfam PF00550 Phosphopantetheine attachment site 514 574 2.9E-9 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain D3790_10265 4bb79fb6002768d8ba747eb817934eef 1000 Pfam PF13193 AMP-binding enzyme C-terminal domain 410 484 1.3E-5 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain D3790_10265 4bb79fb6002768d8ba747eb817934eef 1000 Gene3D G3DSA:3.40.50.12780 1 396 4.5E-104 T 01-11-2018 D3790_10265 4bb79fb6002768d8ba747eb817934eef 1000 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 27 424 1.7E-100 T 01-11-2018 IPR010071 Amino acid adenylation domain D3790_10265 4bb79fb6002768d8ba747eb817934eef 1000 Pfam PF00501 AMP-binding enzyme 6 402 7.6E-73 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D3790_07185 048a69f3ef55a03ad5012f57154d1a3a 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 01-11-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site D3790_07185 048a69f3ef55a03ad5012f57154d1a3a 331 SUPERFAMILY SSF52283 2 137 2.55E-42 T 01-11-2018 D3790_07185 048a69f3ef55a03ad5012f57154d1a3a 331 SUPERFAMILY SSF51735 104 300 1.24E-52 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_07185 048a69f3ef55a03ad5012f57154d1a3a 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 12 330 1.6E-32 T 01-11-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 D3790_07185 048a69f3ef55a03ad5012f57154d1a3a 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 01-11-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site D3790_07185 048a69f3ef55a03ad5012f57154d1a3a 331 Gene3D G3DSA:3.40.50.720 104 299 6.5E-134 T 01-11-2018 D3790_07185 048a69f3ef55a03ad5012f57154d1a3a 331 Gene3D G3DSA:3.40.50.720 2 319 6.5E-134 T 01-11-2018 D3790_07185 048a69f3ef55a03ad5012f57154d1a3a 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 01-11-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 D3790_07185 048a69f3ef55a03ad5012f57154d1a3a 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 299 3.7E-52 T 01-11-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 D3790_01345 341cf08d7533a0364f1c5d45b06f33a9 465 Gene3D G3DSA:3.40.605.10 22 245 7.6E-14 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D3790_01345 341cf08d7533a0364f1c5d45b06f33a9 465 SUPERFAMILY SSF53720 153 441 2.23E-20 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D3790_01345 341cf08d7533a0364f1c5d45b06f33a9 465 Pfam PF00171 Aldehyde dehydrogenase family 155 331 2.2E-9 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D3790_13230 a991b417c4e89dc207128aace6e5a27a 90 Gene3D G3DSA:2.10.260.10 1 89 8.9E-7 T 01-11-2018 D3790_13230 a991b417c4e89dc207128aace6e5a27a 90 SUPERFAMILY SSF89447 3 66 4.71E-8 T 01-11-2018 IPR037914 SpoVT-AbrB domain superfamily D3790_04100 44e9876154d1a77fdb76a2b4b2fa67f5 93 Gene3D G3DSA:2.40.240.10 1 93 1.1E-35 T 01-11-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D3790_04100 44e9876154d1a77fdb76a2b4b2fa67f5 93 SUPERFAMILY SSF50715 1 92 5.06E-31 T 01-11-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D3790_04100 44e9876154d1a77fdb76a2b4b2fa67f5 93 Pfam PF01386 Ribosomal L25p family 4 90 1.6E-25 T 01-11-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 D3790_04100 44e9876154d1a77fdb76a2b4b2fa67f5 93 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 92 3.0E-38 T 01-11-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 D3790_04100 44e9876154d1a77fdb76a2b4b2fa67f5 93 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 93 28.805 T 01-11-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 D3790_15140 6f01693b91107dbdaebfd7e2fabc2681 469 Gene3D G3DSA:1.20.1250.20 266 465 1.9E-6 T 01-11-2018 D3790_15140 6f01693b91107dbdaebfd7e2fabc2681 469 Gene3D G3DSA:1.20.1720.10 21 247 1.6E-25 T 01-11-2018 D3790_15140 6f01693b91107dbdaebfd7e2fabc2681 469 Pfam PF07690 Major Facilitator Superfamily 25 385 8.1E-26 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_15140 6f01693b91107dbdaebfd7e2fabc2681 469 SUPERFAMILY SSF103473 21 463 1.83E-38 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_12885 02a1d2449593303813606156c5ae4ea7 223 SMART SM00345 16 74 1.2E-15 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_12885 02a1d2449593303813606156c5ae4ea7 223 SUPERFAMILY SSF46785 10 78 1.56E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_12885 02a1d2449593303813606156c5ae4ea7 223 Pfam PF07729 FCD domain 84 205 2.1E-14 T 01-11-2018 IPR011711 GntR, C-terminal D3790_12885 02a1d2449593303813606156c5ae4ea7 223 SUPERFAMILY SSF48008 81 214 6.28E-25 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D3790_12885 02a1d2449593303813606156c5ae4ea7 223 Gene3D G3DSA:1.10.10.10 10 75 3.5E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_12885 02a1d2449593303813606156c5ae4ea7 223 Gene3D G3DSA:1.20.120.530 77 221 1.5E-25 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D3790_12885 02a1d2449593303813606156c5ae4ea7 223 SMART SM00895 84 206 1.3E-8 T 01-11-2018 IPR011711 GntR, C-terminal D3790_12885 02a1d2449593303813606156c5ae4ea7 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 9.5E-17 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_12885 02a1d2449593303813606156c5ae4ea7 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 8.5E-5 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_12885 02a1d2449593303813606156c5ae4ea7 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 8.5E-5 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D3790_03650 4fafeca6cdd1ab88938b185c0d7dd878 427 PIRSF PIRSF001369 38 427 5.2E-173 T 01-11-2018 IPR024176 Citrate synthase, bacterial-type D3790_03650 4fafeca6cdd1ab88938b185c0d7dd878 427 SUPERFAMILY SSF48256 4 422 1.31E-165 T 01-11-2018 IPR036969 Citrate synthase superfamily GO:0046912 D3790_03650 4fafeca6cdd1ab88938b185c0d7dd878 427 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 421 1.1E-235 T 01-11-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 D3790_03650 4fafeca6cdd1ab88938b185c0d7dd878 427 Gene3D G3DSA:1.10.230.10 268 376 4.8E-151 T 01-11-2018 IPR016143 Citrate synthase-like, small alpha subdomain D3790_03650 4fafeca6cdd1ab88938b185c0d7dd878 427 PRINTS PR00143 Citrate synthase signature 219 234 3.4E-56 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 D3790_03650 4fafeca6cdd1ab88938b185c0d7dd878 427 PRINTS PR00143 Citrate synthase signature 359 375 3.4E-56 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 D3790_03650 4fafeca6cdd1ab88938b185c0d7dd878 427 PRINTS PR00143 Citrate synthase signature 379 393 3.4E-56 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 D3790_03650 4fafeca6cdd1ab88938b185c0d7dd878 427 PRINTS PR00143 Citrate synthase signature 241 269 3.4E-56 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 D3790_03650 4fafeca6cdd1ab88938b185c0d7dd878 427 PRINTS PR00143 Citrate synthase signature 165 178 3.4E-56 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 D3790_03650 4fafeca6cdd1ab88938b185c0d7dd878 427 PRINTS PR00143 Citrate synthase signature 296 316 3.4E-56 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 D3790_03650 4fafeca6cdd1ab88938b185c0d7dd878 427 Pfam PF00285 Citrate synthase, C-terminal domain 46 410 1.8E-131 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 D3790_03650 4fafeca6cdd1ab88938b185c0d7dd878 427 Gene3D G3DSA:2.20.28.60 1 50 7.7E-20 T 01-11-2018 D3790_03650 4fafeca6cdd1ab88938b185c0d7dd878 427 Gene3D G3DSA:1.10.580.10 57 410 4.8E-151 T 01-11-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 D3790_03650 4fafeca6cdd1ab88938b185c0d7dd878 427 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 01-11-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 D3790_00275 c27ad67f9800041c92b83fbf91dad728 457 Pfam PF13175 AAA ATPase domain 88 350 1.1E-37 T 01-11-2018 D3790_00275 c27ad67f9800041c92b83fbf91dad728 457 Gene3D G3DSA:3.40.50.300 88 378 1.8E-7 T 01-11-2018 D3790_16455 2c28b2fe4fc139246bcc1dbd4cd20461 235 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 38 158 1.2E-52 T 01-11-2018 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 D3790_14600 4f171f050b5a38ebc2f170a3216a940e 258 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 100 250 1.8E-53 T 01-11-2018 IPR021561 Transcriptional regulator, AbiEi 3 antitoxin, Type IV TA system D3790_14600 4f171f050b5a38ebc2f170a3216a940e 258 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 1 97 9.9E-35 T 01-11-2018 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain D3790_17660 078f24356c22b4d02db29774121f4d2b 50 Pfam PF05488 PAAR motif 4 49 2.3E-9 T 01-11-2018 IPR008727 PAAR motif D3790_18730 88335791cccfa28ebdc557d17d0dd4e4 123 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 117 2.3E-35 T 01-11-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 D3790_18730 88335791cccfa28ebdc557d17d0dd4e4 123 Gene3D G3DSA:1.10.3830.10 2 122 7.2E-42 T 01-11-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 D3790_18730 88335791cccfa28ebdc557d17d0dd4e4 123 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 01-11-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 D3790_06685 924b7fc442ebe5a75e4f2ef1c51476b1 308 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 10 305 3.0E-133 T 01-11-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 D3790_06685 924b7fc442ebe5a75e4f2ef1c51476b1 308 Gene3D G3DSA:3.30.54.10 174 305 6.6E-103 T 01-11-2018 D3790_06685 924b7fc442ebe5a75e4f2ef1c51476b1 308 SUPERFAMILY SSF56596 7 306 3.53E-108 T 01-11-2018 IPR036384 Replication terminator Tus superfamily GO:0003677|GO:0005737|GO:0006274 D3790_06685 924b7fc442ebe5a75e4f2ef1c51476b1 308 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 307 6.8E-141 T 01-11-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 D3790_06685 924b7fc442ebe5a75e4f2ef1c51476b1 308 Gene3D G3DSA:3.50.14.10 13 280 6.6E-103 T 01-11-2018 IPR036381 Replication terminator Tus, domain 1 GO:0003677|GO:0005737|GO:0006274 D3790_05445 132f9be0274621584606c222360c5dbf 239 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 11 239 55.273 T 01-11-2018 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae D3790_05445 132f9be0274621584606c222360c5dbf 239 SUPERFAMILY SSF52540 23 218 3.1E-21 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05445 132f9be0274621584606c222360c5dbf 239 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 12 238 1.1E-81 T 01-11-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 D3790_05445 132f9be0274621584606c222360c5dbf 239 Gene3D G3DSA:1.10.8.60 173 239 6.2E-26 T 01-11-2018 D3790_05445 132f9be0274621584606c222360c5dbf 239 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 137 164 1.3E-6 T 01-11-2018 IPR020591 Chromosomal replication control, initiator DnaA-like D3790_05445 132f9be0274621584606c222360c5dbf 239 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 49 69 1.3E-6 T 01-11-2018 IPR020591 Chromosomal replication control, initiator DnaA-like D3790_05445 132f9be0274621584606c222360c5dbf 239 Gene3D G3DSA:3.40.50.300 4 170 5.3E-34 T 01-11-2018 D3790_05445 132f9be0274621584606c222360c5dbf 239 Pfam PF00308 Bacterial dnaA protein 22 217 2.2E-17 T 01-11-2018 IPR013317 Chromosomal replication initiator protein DnaA D3790_16725 967401245410439a15198cb3d409c529 431 SUPERFAMILY SSF88713 203 397 2.03E-31 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 D3790_16725 967401245410439a15198cb3d409c529 431 Pfam PF01522 Polysaccharide deacetylase 241 378 1.2E-19 T 01-11-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 D3790_16725 967401245410439a15198cb3d409c529 431 Gene3D G3DSA:3.20.20.370 177 418 3.6E-60 T 01-11-2018 D3790_18070 e86d5b03ee1537b2d93734a1cc06946f 243 Pfam PF01553 Acyltransferase 62 180 2.2E-32 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D3790_18070 e86d5b03ee1537b2d93734a1cc06946f 243 SUPERFAMILY SSF69593 8 236 9.94E-59 T 01-11-2018 D3790_18070 e86d5b03ee1537b2d93734a1cc06946f 243 SMART SM00563 67 182 6.1E-39 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D3790_18070 e86d5b03ee1537b2d93734a1cc06946f 243 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 4.9E-47 T 01-11-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 D3790_02175 ab6b842e97e2ba55004beed0e4e1198c 299 Pfam PF01513 ATP-NAD kinase 15 278 9.1E-75 T 01-11-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 D3790_02175 ab6b842e97e2ba55004beed0e4e1198c 299 SUPERFAMILY SSF111331 14 296 1.57E-94 T 01-11-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily D3790_02175 ab6b842e97e2ba55004beed0e4e1198c 299 Gene3D G3DSA:2.60.200.30 135 271 4.2E-98 T 01-11-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 D3790_02175 ab6b842e97e2ba55004beed0e4e1198c 299 Hamap MF_00361 NAD kinase [nadK]. 13 294 34.026 T 01-11-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 D3790_02175 ab6b842e97e2ba55004beed0e4e1198c 299 Gene3D G3DSA:3.40.50.10330 30 294 4.2E-98 T 01-11-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 D3790_06550 5aa353274ec1f2071065e02f96542ff4 175 Pfam PF05947 Type VI secretion system, TssF 7 152 1.9E-26 T 01-11-2018 IPR010272 Type VI secretion system, TssF-like D3790_03795 e9c697a9e7abba5bfa76a6dd1cb61c65 47 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 39 1.2E-19 T 01-11-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 D3790_03795 e9c697a9e7abba5bfa76a6dd1cb61c65 47 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 46 16.856 T 01-11-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 D3790_08415 d4c8dd4bb1c5b6f51926fd73e0d80d55 113 Pfam PF12306 Inclusion body protein 14 95 8.4E-5 T 01-11-2018 IPR021087 Uncharacterised protein family PixA/AidA D3790_07540 ff8272f3c1d484549fd4afbd523ec989 230 Gene3D G3DSA:1.10.10.10 1 64 3.4E-15 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_07540 ff8272f3c1d484549fd4afbd523ec989 230 SUPERFAMILY SSF46785 3 62 1.89E-9 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_07540 ff8272f3c1d484549fd4afbd523ec989 230 Pfam PF08279 HTH domain 6 59 1.4E-15 T 01-11-2018 IPR013196 Helix-turn-helix, type 11 D3790_07540 ff8272f3c1d484549fd4afbd523ec989 230 Pfam PF13280 WYL domain 138 225 1.2E-14 T 01-11-2018 IPR026881 WYL domain D3790_15995 5232a8a2e796654f371c2ad970ef3ffb 610 PIRSF PIRSF028304 1 610 2.1E-183 T 01-11-2018 IPR010272 Type VI secretion system, TssF-like D3790_15995 5232a8a2e796654f371c2ad970ef3ffb 610 Pfam PF05947 Type VI secretion system, TssF 5 608 1.7E-197 T 01-11-2018 IPR010272 Type VI secretion system, TssF-like D3790_15995 5232a8a2e796654f371c2ad970ef3ffb 610 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 3 610 7.0E-196 T 01-11-2018 IPR010272 Type VI secretion system, TssF-like D3790_09095 ba9a51d8686187419452c2595a9c2626 141 Gene3D G3DSA:1.10.10.60 32 81 1.2E-5 T 01-11-2018 D3790_09095 ba9a51d8686187419452c2595a9c2626 141 Gene3D G3DSA:1.10.10.60 82 140 6.4E-12 T 01-11-2018 D3790_09095 ba9a51d8686187419452c2595a9c2626 141 SUPERFAMILY SSF46689 32 126 2.96E-16 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_09095 ba9a51d8686187419452c2595a9c2626 141 Pfam PF08765 Mor transcription activator family 32 139 1.1E-23 T 01-11-2018 IPR014875 Mor transcription activator D3790_16440 342b7cc8e122b14acf298a68a19d64a1 486 Gene3D G3DSA:3.30.830.10 12 254 7.6E-37 T 01-11-2018 D3790_16440 342b7cc8e122b14acf298a68a19d64a1 486 Gene3D G3DSA:3.30.830.10 256 470 2.8E-86 T 01-11-2018 D3790_16440 342b7cc8e122b14acf298a68a19d64a1 486 Pfam PF00675 Insulinase (Peptidase family M16) 51 157 4.2E-6 T 01-11-2018 IPR011765 Peptidase M16, N-terminal D3790_16440 342b7cc8e122b14acf298a68a19d64a1 486 SUPERFAMILY SSF63411 263 454 4.58E-5 T 01-11-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D3790_16440 342b7cc8e122b14acf298a68a19d64a1 486 SUPERFAMILY SSF63411 28 239 6.78E-20 T 01-11-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D3790_16440 342b7cc8e122b14acf298a68a19d64a1 486 Pfam PF05193 Peptidase M16 inactive domain 200 373 5.3E-10 T 01-11-2018 IPR007863 Peptidase M16, C-terminal D3790_08010 8e5c2599f26f62bdf8504206ae632202 99 Pfam PF13358 DDE superfamily endonuclease 15 92 4.8E-10 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_02700 0122d0dded8901fb27df801ef166d651 168 Pfam PF06995 Phage P2 GpU 6 124 7.7E-45 T 01-11-2018 IPR009734 Myoviridae, GpU D3790_02700 0122d0dded8901fb27df801ef166d651 168 PIRSF PIRSF029208 1 147 2.3E-56 T 01-11-2018 IPR016912 Bacteriophage P2, GpU D3790_12800 bec2281b19cd3c1c2f715e09fde69878 582 Gene3D G3DSA:2.40.110.10 118 254 1.8E-30 T 01-11-2018 D3790_12800 bec2281b19cd3c1c2f715e09fde69878 582 SUPERFAMILY SSF47203 258 430 6.13E-26 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 D3790_12800 bec2281b19cd3c1c2f715e09fde69878 582 Gene3D G3DSA:1.20.140.10 265 428 2.3E-22 T 01-11-2018 D3790_12800 bec2281b19cd3c1c2f715e09fde69878 582 PIRSF PIRSF000168 27 443 2.4E-86 T 01-11-2018 IPR012258 Acyl-CoA oxidase GO:0003997|GO:0005777|GO:0006631|GO:0071949 KEGG: 00071+1.3.3.6|KEGG: 00592+1.3.3.6|MetaCyc: PWY-5136|MetaCyc: PWY-6837|MetaCyc: PWY-6920|MetaCyc: PWY-7007|MetaCyc: PWY-7288|MetaCyc: PWY-7291|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7574|MetaCyc: PWY-7606|MetaCyc: PWY-7726|MetaCyc: PWY-7854|MetaCyc: PWY-7858|Reactome: R-HSA-9033241 D3790_12800 bec2281b19cd3c1c2f715e09fde69878 582 PIRSF PIRSF000168 425 580 0.021 T 01-11-2018 IPR012258 Acyl-CoA oxidase GO:0003997|GO:0005777|GO:0006631|GO:0071949 KEGG: 00071+1.3.3.6|KEGG: 00592+1.3.3.6|MetaCyc: PWY-5136|MetaCyc: PWY-6837|MetaCyc: PWY-6920|MetaCyc: PWY-7007|MetaCyc: PWY-7288|MetaCyc: PWY-7291|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7574|MetaCyc: PWY-7606|MetaCyc: PWY-7726|MetaCyc: PWY-7854|MetaCyc: PWY-7858|Reactome: R-HSA-9033241 D3790_12800 bec2281b19cd3c1c2f715e09fde69878 582 SUPERFAMILY SSF56645 64 236 3.24E-22 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 D3790_01885 caa32f551878773b0bb679a02b375d8b 296 SUPERFAMILY SSF51658 5 289 4.98E-55 T 01-11-2018 IPR036237 Xylose isomerase-like superfamily D3790_01885 caa32f551878773b0bb679a02b375d8b 296 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 4 289 7.0E-127 T 01-11-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 D3790_01885 caa32f551878773b0bb679a02b375d8b 296 Pfam PF01261 Xylose isomerase-like TIM barrel 31 244 1.1E-24 T 01-11-2018 IPR013022 Xylose isomerase-like, TIM barrel domain D3790_01885 caa32f551878773b0bb679a02b375d8b 296 Gene3D G3DSA:3.20.20.150 2 289 1.9E-70 T 01-11-2018 D3790_00670 abcf73bb84bc7bb18d23687c8083cd38 527 SUPERFAMILY SSF110849 34 136 1.6E-9 T 01-11-2018 IPR036086 ParB/Sulfiredoxin superfamily D3790_00670 abcf73bb84bc7bb18d23687c8083cd38 527 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 27 291 4.8E-117 T 01-11-2018 IPR022304 Integrating conjugative element, PFGI-1, ParB D3790_07420 86d6d353956ca631bcb1d8871d827a33 389 SUPERFAMILY SSF53383 12 388 1.36E-97 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_07420 86d6d353956ca631bcb1d8871d827a33 389 Gene3D G3DSA:3.40.640.10 70 286 1.5E-113 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_07420 86d6d353956ca631bcb1d8871d827a33 389 Gene3D G3DSA:3.90.1150.10 33 384 1.5E-113 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D3790_07420 86d6d353956ca631bcb1d8871d827a33 389 Pfam PF00155 Aminotransferase class I and II 39 384 8.5E-62 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D3790_14410 0ec0c4ed03075d8bf293db3d9f3c1464 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 62 5.5E-8 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D3790_14410 0ec0c4ed03075d8bf293db3d9f3c1464 216 Gene3D G3DSA:1.10.357.10 57 211 4.5E-43 T 01-11-2018 D3790_14410 0ec0c4ed03075d8bf293db3d9f3c1464 216 SUPERFAMILY SSF46689 8 81 1.13E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_14410 0ec0c4ed03075d8bf293db3d9f3c1464 216 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 5 213 54.009 T 01-11-2018 IPR023764 Transcriptional repressor HTH, FabR D3790_14410 0ec0c4ed03075d8bf293db3d9f3c1464 216 Gene3D G3DSA:1.10.10.60 5 56 7.5E-23 T 01-11-2018 D3790_12830 f6d97c0a3c20de74be562bca5bf4145f 358 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 32 345 3.5E-69 T 01-11-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 D3790_12830 f6d97c0a3c20de74be562bca5bf4145f 358 SUPERFAMILY SSF51695 28 351 8.37E-91 T 01-11-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 D3790_12830 f6d97c0a3c20de74be562bca5bf4145f 358 Gene3D G3DSA:3.20.20.190 25 352 6.7E-132 T 01-11-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 D3790_08860 35ac0bfa01ad25ee4110731222c667c8 165 Gene3D G3DSA:2.40.50.180 37 146 1.8E-39 T 01-11-2018 D3790_08860 35ac0bfa01ad25ee4110731222c667c8 165 SUPERFAMILY SSF50341 14 156 3.4E-39 T 01-11-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 D3790_08860 35ac0bfa01ad25ee4110731222c667c8 165 Pfam PF01584 CheW-like domain 18 154 3.1E-36 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D3790_08860 35ac0bfa01ad25ee4110731222c667c8 165 SMART SM00260 14 151 5.0E-43 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D3790_08860 35ac0bfa01ad25ee4110731222c667c8 165 Gene3D G3DSA:2.30.30.40 20 145 1.8E-39 T 01-11-2018 D3790_05075 2cbd4a6630a20a1e1c17f845d6cc9f69 412 Pfam PF06792 Uncharacterised protein family (UPF0261) 5 402 4.4E-149 T 01-11-2018 IPR008322 Uncharacterised protein family UPF0261 D3790_05075 2cbd4a6630a20a1e1c17f845d6cc9f69 412 PIRSF PIRSF033271 1 405 4.4E-155 T 01-11-2018 IPR008322 Uncharacterised protein family UPF0261 D3790_05075 2cbd4a6630a20a1e1c17f845d6cc9f69 412 Gene3D G3DSA:3.40.50.12030 185 404 9.6E-79 T 01-11-2018 D3790_05075 2cbd4a6630a20a1e1c17f845d6cc9f69 412 Gene3D G3DSA:3.40.50.12020 2 178 1.1E-56 T 01-11-2018 D3790_19470 9562b69abd49a16cb97c3e7ff91d337c 72 Pfam PF07362 Post-segregation antitoxin CcdA 2 72 4.0E-23 T 01-11-2018 IPR009956 Post-segregation antitoxin CcdA D3790_11355 16be8d307909fe5dd4df6eae7034924b 232 Pfam PF06508 Queuosine biosynthesis protein QueC 3 214 4.2E-83 T 01-11-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 D3790_11355 16be8d307909fe5dd4df6eae7034924b 232 PIRSF PIRSF006293 1 226 9.2E-84 T 01-11-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 D3790_11355 16be8d307909fe5dd4df6eae7034924b 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 49.868 T 01-11-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 D3790_11355 16be8d307909fe5dd4df6eae7034924b 232 Gene3D G3DSA:3.40.50.620 1 232 3.7E-82 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3790_11355 16be8d307909fe5dd4df6eae7034924b 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 207 1.9E-84 T 01-11-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 D3790_11355 16be8d307909fe5dd4df6eae7034924b 232 SUPERFAMILY SSF52402 1 213 1.63E-64 T 01-11-2018 D3790_10355 64fb8d4e96293e2311b18daa4e02fc8a 302 Pfam PF04865 Baseplate J-like protein 116 261 2.7E-25 T 01-11-2018 IPR006949 Baseplate protein J-like D3790_10355 64fb8d4e96293e2311b18daa4e02fc8a 302 PIRSF PIRSF020481 1 302 4.2E-126 T 01-11-2018 IPR014507 Baseplate assembly protein J, predicted D3790_04175 aef719c0e4aee89100b41bac0af63f4e 232 Pfam PF05036 Sporulation related domain 156 227 5.7E-9 T 01-11-2018 IPR007730 Sporulation-like domain GO:0042834 D3790_04175 aef719c0e4aee89100b41bac0af63f4e 232 Hamap MF_02022 Cell division protein DedD [dedD]. 14 232 22.932 T 01-11-2018 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 D3790_04175 aef719c0e4aee89100b41bac0af63f4e 232 Gene3D G3DSA:3.30.70.1070 149 226 2.6E-5 T 01-11-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D3790_04175 aef719c0e4aee89100b41bac0af63f4e 232 SUPERFAMILY SSF110997 155 228 9.42E-13 T 01-11-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D3790_05420 974c3edab80bf60ca2abc789d1e2f697 180 Gene3D G3DSA:3.40.630.30 9 176 5.7E-47 T 01-11-2018 D3790_05420 974c3edab80bf60ca2abc789d1e2f697 180 Pfam PF13302 Acetyltransferase (GNAT) domain 11 144 8.0E-22 T 01-11-2018 IPR000182 GNAT domain D3790_05420 974c3edab80bf60ca2abc789d1e2f697 180 SUPERFAMILY SSF55729 10 165 4.97E-37 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_13075 c347d44a979fa39e860d64afdcc4149e 90 Gene3D G3DSA:3.10.310.10 1 68 1.0E-13 T 01-11-2018 D3790_13075 c347d44a979fa39e860d64afdcc4149e 90 SUPERFAMILY SSF54506 1 88 3.3E-16 T 01-11-2018 D3790_13075 c347d44a979fa39e860d64afdcc4149e 90 Pfam PF04303 PrpF protein 1 88 8.8E-12 T 01-11-2018 IPR007400 PrpF protein D3790_14755 93792fb5f0cad418b6ba438ba04db665 367 Pfam PF00534 Glycosyl transferases group 1 181 347 4.6E-38 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 D3790_14755 93792fb5f0cad418b6ba438ba04db665 367 Gene3D G3DSA:3.40.50.2000 179 352 4.6E-47 T 01-11-2018 D3790_14755 93792fb5f0cad418b6ba438ba04db665 367 Pfam PF13439 Glycosyltransferase Family 4 14 173 3.2E-14 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D3790_14755 93792fb5f0cad418b6ba438ba04db665 367 SUPERFAMILY SSF53756 8 366 1.39E-85 T 01-11-2018 D3790_14755 93792fb5f0cad418b6ba438ba04db665 367 Gene3D G3DSA:3.40.50.2000 1 178 4.4E-19 T 01-11-2018 D3790_11745 d20b9acdbeeb441f3274c8573e9fbc05 231 Pfam PF01048 Phosphorylase superfamily 2 219 6.9E-49 T 01-11-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 D3790_11745 d20b9acdbeeb441f3274c8573e9fbc05 231 SUPERFAMILY SSF53167 1 228 1.01E-72 T 01-11-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 D3790_11745 d20b9acdbeeb441f3274c8573e9fbc05 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 46.134 T 01-11-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 D3790_11745 d20b9acdbeeb441f3274c8573e9fbc05 231 Gene3D G3DSA:3.40.50.1580 1 231 6.5E-67 T 01-11-2018 D3790_11745 d20b9acdbeeb441f3274c8573e9fbc05 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 227 2.5E-109 T 01-11-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 D3790_09620 40f9785f64d13adcdd31687aacc72652 194 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 8 157 7.0E-40 T 01-11-2018 IPR005565 Haemolysin activator HlyB, C-terminal D3790_09620 40f9785f64d13adcdd31687aacc72652 194 Gene3D G3DSA:2.40.160.50 5 194 5.7E-40 T 01-11-2018 D3790_17950 e84bbf67bae31a568d3fcf2de996972c 259 Gene3D G3DSA:3.40.630.30 33 256 1.6E-15 T 01-11-2018 D3790_17950 e84bbf67bae31a568d3fcf2de996972c 259 SUPERFAMILY SSF55729 160 255 3.09E-16 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_17950 e84bbf67bae31a568d3fcf2de996972c 259 Pfam PF13673 Acetyltransferase (GNAT) domain 167 250 5.8E-6 T 01-11-2018 IPR000182 GNAT domain D3790_01870 d54756272b0eb94a7912753c7c7d8d02 330 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 119 5.1E-19 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 D3790_01870 d54756272b0eb94a7912753c7c7d8d02 330 SUPERFAMILY SSF51735 2 141 1.58E-36 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_01870 d54756272b0eb94a7912753c7c7d8d02 330 Gene3D G3DSA:3.30.360.10 138 268 3.6E-90 T 01-11-2018 D3790_01870 d54756272b0eb94a7912753c7c7d8d02 330 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 161 235 2.8E-6 T 01-11-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 D3790_01870 d54756272b0eb94a7912753c7c7d8d02 330 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 1 327 8.8E-131 T 01-11-2018 IPR030827 Inositol 2-dehydrogenase D3790_01870 d54756272b0eb94a7912753c7c7d8d02 330 Gene3D G3DSA:3.40.50.720 5 321 3.6E-90 T 01-11-2018 D3790_01870 d54756272b0eb94a7912753c7c7d8d02 330 SUPERFAMILY SSF55347 124 286 2.49E-32 T 01-11-2018 D3790_02225 21ccadbf915cf2447a609ac5ba82d8ec 154 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 139 2.1E-30 T 01-11-2018 D3790_02225 21ccadbf915cf2447a609ac5ba82d8ec 154 PIRSF PIRSF004923 1 150 1.1E-32 T 01-11-2018 IPR026268 Protein RseC D3790_08495 28582057ce7a4c826e639e31e40e1058 168 SUPERFAMILY SSF47240 1 159 1.52E-57 T 01-11-2018 IPR009078 Ferritin-like superfamily D3790_08495 28582057ce7a4c826e639e31e40e1058 168 Pfam PF00210 Ferritin-like domain 7 143 6.1E-41 T 01-11-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 D3790_08495 28582057ce7a4c826e639e31e40e1058 168 Gene3D G3DSA:1.20.1260.10 1 168 2.6E-50 T 01-11-2018 IPR012347 Ferritin-like D3790_04765 10131c5aee14420cc8c0f9dfd1fc6830 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 18.656 T 01-11-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 D3790_04765 10131c5aee14420cc8c0f9dfd1fc6830 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 2.2E-22 T 01-11-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like D3790_16915 7fbc48478e12c834db15a397fac9f8f3 332 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 226 267 - T 01-11-2018 IPR000952 AB hydrolase 4, conserved site D3790_16915 7fbc48478e12c834db15a397fac9f8f3 332 Pfam PF00561 alpha/beta hydrolase fold 60 299 4.5E-22 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_16915 7fbc48478e12c834db15a397fac9f8f3 332 SUPERFAMILY SSF53474 24 302 3.3E-37 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_16915 7fbc48478e12c834db15a397fac9f8f3 332 PIRSF PIRSF005211 1 331 2.8E-107 T 01-11-2018 IPR012020 AB hydrolase 4 family D3790_18100 77fc0c919ded79ce188a95f5a1e354cd 333 Gene3D G3DSA:3.40.718.10 2 333 2.8E-129 T 01-11-2018 D3790_18100 77fc0c919ded79ce188a95f5a1e354cd 333 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 9 327 4.5E-128 T 01-11-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 D3790_18100 77fc0c919ded79ce188a95f5a1e354cd 333 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 36 324 1.4E-107 T 01-11-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 D3790_18100 77fc0c919ded79ce188a95f5a1e354cd 333 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 7 331 36.643 T 01-11-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 D3790_18100 77fc0c919ded79ce188a95f5a1e354cd 333 SUPERFAMILY SSF53659 8 330 9.1E-116 T 01-11-2018 D3790_12285 1278ac42eb6963f69c2e1ab6420a462b 410 SUPERFAMILY SSF103473 11 396 1.09E-35 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_12285 1278ac42eb6963f69c2e1ab6420a462b 410 Gene3D G3DSA:1.20.1250.20 10 393 2.6E-28 T 01-11-2018 D3790_12285 1278ac42eb6963f69c2e1ab6420a462b 410 Pfam PF07690 Major Facilitator Superfamily 12 353 1.2E-22 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_07445 27bce43ed1f0018bc49bb96c1e3550e7 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 8.7E-106 T 01-11-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_07445 27bce43ed1f0018bc49bb96c1e3550e7 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 37.006 T 01-11-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_07445 27bce43ed1f0018bc49bb96c1e3550e7 247 Pfam PF01709 Transcriptional regulator 5 236 5.9E-95 T 01-11-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_07445 27bce43ed1f0018bc49bb96c1e3550e7 247 Gene3D G3DSA:3.30.70.980 130 205 4.2E-61 T 01-11-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_07445 27bce43ed1f0018bc49bb96c1e3550e7 247 Gene3D G3DSA:3.30.70.980 85 236 4.2E-61 T 01-11-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_07445 27bce43ed1f0018bc49bb96c1e3550e7 247 Gene3D G3DSA:1.10.10.200 1 81 1.2E-33 T 01-11-2018 IPR017856 Integrase-like, N-terminal D3790_07445 27bce43ed1f0018bc49bb96c1e3550e7 247 SUPERFAMILY SSF75625 3 244 3.53E-96 T 01-11-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D3790_16805 ff759a24bc838db12bfb605cbab61507 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 26 141 9.0E-61 T 01-11-2018 IPR013559 YheO-like D3790_16805 ff759a24bc838db12bfb605cbab61507 240 Pfam PF13309 HTH domain 171 228 3.2E-19 T 01-11-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain D3790_16805 ff759a24bc838db12bfb605cbab61507 240 Pfam PF08348 YheO-like PAS domain 29 137 3.5E-36 T 01-11-2018 IPR013559 YheO-like D3790_17170 9551519a43aa33f50e4576737fe6bd4c 217 SUPERFAMILY SSF56784 1 207 2.71E-32 T 01-11-2018 IPR036412 HAD-like superfamily D3790_17170 9551519a43aa33f50e4576737fe6bd4c 217 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 60 179 9.5E-8 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D3790_17170 9551519a43aa33f50e4576737fe6bd4c 217 Gene3D G3DSA:1.10.150.240 16 84 3.3E-33 T 01-11-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D3790_17170 9551519a43aa33f50e4576737fe6bd4c 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 178 6.0E-25 T 01-11-2018 D3790_17170 9551519a43aa33f50e4576737fe6bd4c 217 Gene3D G3DSA:3.40.50.1000 7 192 3.3E-33 T 01-11-2018 IPR023214 HAD superfamily D3790_15190 243cf9306932941207106a0a5bec89d1 692 Gene3D G3DSA:3.10.290.30 520 682 2.4E-41 T 01-11-2018 IPR024047 MM3350-like superfamily D3790_15190 243cf9306932941207106a0a5bec89d1 692 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 522 678 2.7E-39 T 01-11-2018 IPR012912 Plasmid pRiA4b, Orf3 D3790_15190 243cf9306932941207106a0a5bec89d1 692 SUPERFAMILY SSF159941 522 683 7.72E-40 T 01-11-2018 IPR024047 MM3350-like superfamily D3790_02625 de699abc79d3b9167b89eea4134fe641 150 Gene3D G3DSA:1.10.357.40 1 150 2.8E-56 T 01-11-2018 IPR037238 YbiA-like superfamily D3790_02625 de699abc79d3b9167b89eea4134fe641 150 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 7 147 5.8E-39 T 01-11-2018 IPR012816 NADAR D3790_02625 de699abc79d3b9167b89eea4134fe641 150 SUPERFAMILY SSF143990 5 148 5.75E-50 T 01-11-2018 IPR037238 YbiA-like superfamily D3790_02625 de699abc79d3b9167b89eea4134fe641 150 Pfam PF08719 Domain of unknown function (DUF1768) 9 147 2.4E-34 T 01-11-2018 IPR012816 NADAR D3790_00530 944761e7a5d55541eec2eeba752618ff 284 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 66 278 3.0E-61 T 01-11-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 D3790_04530 47b16460e73015683d9e285c2bad19e3 263 Gene3D G3DSA:3.40.50.720 6 239 2.7E-27 T 01-11-2018 D3790_04530 47b16460e73015683d9e285c2bad19e3 263 Pfam PF00106 short chain dehydrogenase 13 182 1.6E-18 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_04530 47b16460e73015683d9e285c2bad19e3 263 SUPERFAMILY SSF51735 11 194 6.18E-26 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_04530 47b16460e73015683d9e285c2bad19e3 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D3790_04530 47b16460e73015683d9e285c2bad19e3 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.7E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_04530 47b16460e73015683d9e285c2bad19e3 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.7E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_11985 c0b6b60791da3d548b496f9be9f54c4a 549 Gene3D G3DSA:3.10.105.10 308 519 1.5E-183 T 01-11-2018 D3790_11985 c0b6b60791da3d548b496f9be9f54c4a 549 Gene3D G3DSA:3.90.76.10 83 206 1.5E-183 T 01-11-2018 D3790_11985 c0b6b60791da3d548b496f9be9f54c4a 549 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 99 120 - T 01-11-2018 IPR023765 Solute-binding protein family 5, conserved site D3790_11985 c0b6b60791da3d548b496f9be9f54c4a 549 PIRSF PIRSF002741 10 549 2.0E-115 T 01-11-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 D3790_11985 c0b6b60791da3d548b496f9be9f54c4a 549 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 93 472 2.1E-93 T 01-11-2018 IPR000914 Solute-binding protein family 5 domain D3790_11985 c0b6b60791da3d548b496f9be9f54c4a 549 Gene3D G3DSA:3.40.190.10 54 530 1.5E-183 T 01-11-2018 D3790_11985 c0b6b60791da3d548b496f9be9f54c4a 549 SUPERFAMILY SSF53850 47 546 8.06E-142 T 01-11-2018 D3790_01180 90709f16ed8f8056c540cb194796d838 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 6.3E-41 T 01-11-2018 IPR007416 Protein of unknown function DUF469 D3790_08530 dd9b54b412814ddf5337805901aaa9ba 454 Pfam PF03315 Serine dehydratase beta chain 3 155 1.5E-55 T 01-11-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 D3790_08530 dd9b54b412814ddf5337805901aaa9ba 454 Gene3D G3DSA:3.30.1330.90 10 159 2.0E-50 T 01-11-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 D3790_08530 dd9b54b412814ddf5337805901aaa9ba 454 SUPERFAMILY SSF143548 16 158 1.36E-44 T 01-11-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 D3790_08530 dd9b54b412814ddf5337805901aaa9ba 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 7.3E-95 T 01-11-2018 IPR005130 Serine dehydratase-like, alpha subunit D3790_08530 dd9b54b412814ddf5337805901aaa9ba 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 2.2E-221 T 01-11-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 D3790_01495 e2c008aee545a41f4fa6d6b181e1f4d3 126 Pfam PF05899 Protein of unknown function (DUF861) 43 116 2.9E-16 T 01-11-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 D3790_01495 e2c008aee545a41f4fa6d6b181e1f4d3 126 SUPERFAMILY SSF51182 26 117 1.72E-16 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily D3790_01495 e2c008aee545a41f4fa6d6b181e1f4d3 126 Gene3D G3DSA:2.60.120.10 12 118 2.0E-22 T 01-11-2018 IPR014710 RmlC-like jelly roll fold D3790_03120 e9e8544cccc2e539ba67fb0f28b3fd16 348 SUPERFAMILY SSF81345 29 341 9.15E-62 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_03120 e9e8544cccc2e539ba67fb0f28b3fd16 348 Pfam PF01032 FecCD transport family 40 341 1.6E-67 T 01-11-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 D3790_03120 e9e8544cccc2e539ba67fb0f28b3fd16 348 Gene3D G3DSA:1.10.3470.10 22 344 3.4E-70 T 01-11-2018 IPR037294 ABC transporter, BtuC-like D3790_19535 a058fc4c5aa0297408658003754dc76e 219 Pfam PF10144 Bacterial virulence factor haemolysin 1 162 1.1E-63 T 01-11-2018 IPR019305 Uncharacterised protein family Smp D3790_00390 609a3d060998b0dfcc81f40e3c5308ea 211 Pfam PF08906 Domain of unknown function (DUF1851) 132 203 3.4E-16 T 01-11-2018 IPR015002 Domain of unknown function DUF1851 D3790_00390 609a3d060998b0dfcc81f40e3c5308ea 211 Pfam PF08887 GAD-like domain 5 108 6.4E-31 T 01-11-2018 IPR014983 GAD-related D3790_05810 17911367fbcc6b84b1cd3a7d1993cd95 139 Pfam PF13551 Winged helix-turn helix 18 78 5.6E-11 T 01-11-2018 D3790_05810 17911367fbcc6b84b1cd3a7d1993cd95 139 SUPERFAMILY SSF46689 10 114 1.52E-6 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_07500 72ead055665780f16deb01d76306f772 401 Gene3D G3DSA:1.20.1250.20 12 385 4.3E-48 T 01-11-2018 D3790_07500 72ead055665780f16deb01d76306f772 401 SUPERFAMILY SSF103473 13 392 6.15E-53 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_07500 72ead055665780f16deb01d76306f772 401 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 401 39.663 T 01-11-2018 IPR022855 Multidrug resistance protein MdtH D3790_07500 72ead055665780f16deb01d76306f772 401 Pfam PF07690 Major Facilitator Superfamily 20 235 3.2E-25 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_07065 bde2d6b3ca29dc24665173f054832b62 292 SUPERFAMILY SSF103481 42 140 6.28E-10 T 01-11-2018 D3790_07065 bde2d6b3ca29dc24665173f054832b62 292 Pfam PF00892 EamA-like transporter family 15 138 8.9E-10 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D3790_07065 bde2d6b3ca29dc24665173f054832b62 292 Pfam PF00892 EamA-like transporter family 150 280 2.7E-11 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D3790_07065 bde2d6b3ca29dc24665173f054832b62 292 SUPERFAMILY SSF103481 187 282 5.23E-11 T 01-11-2018 D3790_08550 fd6dc6a7b724904a28414eb2ee43e305 152 Pfam PF06173 Protein of unknown function (DUF986) 5 151 1.1E-60 T 01-11-2018 IPR009328 Protein of unknown function DUF986 D3790_08550 fd6dc6a7b724904a28414eb2ee43e305 152 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 28.667 T 01-11-2018 IPR009328 Protein of unknown function DUF986 D3790_08550 fd6dc6a7b724904a28414eb2ee43e305 152 PIRSF PIRSF020687 1 152 3.3E-60 T 01-11-2018 IPR009328 Protein of unknown function DUF986 D3790_08550 fd6dc6a7b724904a28414eb2ee43e305 152 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 21 144 4.0E-32 T 01-11-2018 IPR009328 Protein of unknown function DUF986 D3790_07595 f157049118ceb39200c06cc0f284cbf5 96 TIGRFAM TIGR04042 MSMEG_0570_fam: MSMEG_0570 family protein 2 90 6.2E-33 T 01-11-2018 IPR023846 Conserved hypothetical protein CHP04042, MSMEG0570 D3790_17395 67509a27de86e35549a02b250977de0f 261 Pfam PF01420 Type I restriction modification DNA specificity domain 73 215 2.7E-10 T 01-11-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 D3790_17395 67509a27de86e35549a02b250977de0f 261 Gene3D G3DSA:3.90.220.20 14 182 8.8E-15 T 01-11-2018 D3790_17395 67509a27de86e35549a02b250977de0f 261 SUPERFAMILY SSF116734 24 229 1.05E-30 T 01-11-2018 D3790_17395 67509a27de86e35549a02b250977de0f 261 Gene3D G3DSA:1.10.287.1120 189 228 1.4E-15 T 01-11-2018 D3790_17395 67509a27de86e35549a02b250977de0f 261 Gene3D G3DSA:3.90.220.20 229 258 1.4E-15 T 01-11-2018 D3790_01875 5ce55cb51d8bf442ac9fb7cac50ab1e1 557 Gene3D G3DSA:1.20.1730.10 22 548 1.1E-119 T 01-11-2018 IPR038377 Sodium/glucose symporter superfamily D3790_01875 5ce55cb51d8bf442ac9fb7cac50ab1e1 557 Pfam PF00474 Sodium:solute symporter family 34 443 2.0E-50 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 D3790_01875 5ce55cb51d8bf442ac9fb7cac50ab1e1 557 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 34 443 5.7E-86 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 D3790_18995 2060e0757b534fac851ca36c11047abb 490 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 2.4E-183 T 01-11-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 D3790_18995 2060e0757b534fac851ca36c11047abb 490 Gene3D G3DSA:3.40.1670.10 337 454 4.7E-51 T 01-11-2018 D3790_18995 2060e0757b534fac851ca36c11047abb 490 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 431 7.2E-172 T 01-11-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 D3790_18995 2060e0757b534fac851ca36c11047abb 490 SUPERFAMILY SSF143968 323 485 4.71E-66 T 01-11-2018 D3790_18995 2060e0757b534fac851ca36c11047abb 490 Gene3D G3DSA:1.20.5.570 455 490 6.9E-16 T 01-11-2018 D3790_18995 2060e0757b534fac851ca36c11047abb 490 SUPERFAMILY SSF50475 3 322 3.26E-127 T 01-11-2018 D3790_18995 2060e0757b534fac851ca36c11047abb 490 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 73.793 T 01-11-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 D3790_10450 33526c32e40c3b26d2763aeb9ca3f46e 358 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 16 343 5.9E-112 T 01-11-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 D3790_10450 33526c32e40c3b26d2763aeb9ca3f46e 358 Pfam PF02277 Phosphoribosyltransferase 10 342 9.9E-114 T 01-11-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 D3790_10450 33526c32e40c3b26d2763aeb9ca3f46e 358 Gene3D G3DSA:3.40.50.10210 56 327 1.4E-122 T 01-11-2018 D3790_10450 33526c32e40c3b26d2763aeb9ca3f46e 358 SUPERFAMILY SSF52733 4 345 7.72E-107 T 01-11-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 D3790_10450 33526c32e40c3b26d2763aeb9ca3f46e 358 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 12 346 31.197 T 01-11-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 D3790_10450 33526c32e40c3b26d2763aeb9ca3f46e 358 Gene3D G3DSA:1.10.1610.10 10 336 1.4E-122 T 01-11-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 D3790_10875 43a74a8652225617c3e8eb213ff87fa7 501 Pfam PF00437 Type II/IV secretion system protein 128 392 1.6E-82 T 01-11-2018 IPR001482 Type II/IV secretion system protein D3790_10875 43a74a8652225617c3e8eb213ff87fa7 501 SUPERFAMILY SSF52540 110 495 4.84E-87 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_10875 43a74a8652225617c3e8eb213ff87fa7 501 Gene3D G3DSA:3.40.50.300 227 500 3.7E-100 T 01-11-2018 D3790_10875 43a74a8652225617c3e8eb213ff87fa7 501 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 320 334 - T 01-11-2018 IPR001482 Type II/IV secretion system protein D3790_10875 43a74a8652225617c3e8eb213ff87fa7 501 SMART SM00382 253 374 1.8E-4 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_10875 43a74a8652225617c3e8eb213ff87fa7 501 Gene3D G3DSA:3.30.450.90 91 226 1.2E-44 T 01-11-2018 D3790_00855 a5888200341dbc6f089596ed0b360ff5 139 Pfam PF08786 DcrB 10 135 2.1E-36 T 01-11-2018 IPR014894 Protein DcrB D3790_00855 a5888200341dbc6f089596ed0b360ff5 139 SUPERFAMILY SSF55724 4 138 4.03E-40 T 01-11-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich D3790_00855 a5888200341dbc6f089596ed0b360ff5 139 Gene3D G3DSA:3.40.1000.10 3 139 1.9E-37 T 01-11-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich D3790_19605 5b5a79e2075fec94f6b1ad9bcb327476 300 Gene3D G3DSA:3.40.50.1980 127 295 4.6E-43 T 01-11-2018 D3790_19605 5b5a79e2075fec94f6b1ad9bcb327476 300 Pfam PF01497 Periplasmic binding protein 40 268 5.8E-29 T 01-11-2018 IPR002491 ABC transporter periplasmic binding domain D3790_19605 5b5a79e2075fec94f6b1ad9bcb327476 300 Gene3D G3DSA:3.40.50.1980 17 125 1.0E-29 T 01-11-2018 D3790_19605 5b5a79e2075fec94f6b1ad9bcb327476 300 SUPERFAMILY SSF53807 17 277 4.71E-56 T 01-11-2018 D3790_17145 2ed2b13f3728d6ea94bbd99b833c0fb2 716 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 102 707 2.5E-214 T 01-11-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 D3790_17145 2ed2b13f3728d6ea94bbd99b833c0fb2 716 Pfam PF02446 4-alpha-glucanotransferase 156 689 2.1E-130 T 01-11-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 D3790_17145 2ed2b13f3728d6ea94bbd99b833c0fb2 716 SUPERFAMILY SSF51445 150 705 8.43E-145 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily D3790_02905 1eeeacd222bc7266aa3c86c9585cbedb 176 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 01-11-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 D3790_02905 1eeeacd222bc7266aa3c86c9585cbedb 176 SUPERFAMILY SSF52540 2 168 2.14E-25 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_02905 1eeeacd222bc7266aa3c86c9585cbedb 176 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 24.834 T 01-11-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 D3790_02905 1eeeacd222bc7266aa3c86c9585cbedb 176 Pfam PF01202 Shikimate kinase 11 166 1.3E-45 T 01-11-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 D3790_02905 1eeeacd222bc7266aa3c86c9585cbedb 176 PRINTS PR01100 Shikimate kinase family signature 95 112 7.6E-24 T 01-11-2018 D3790_02905 1eeeacd222bc7266aa3c86c9585cbedb 176 PRINTS PR01100 Shikimate kinase family signature 29 42 7.6E-24 T 01-11-2018 D3790_02905 1eeeacd222bc7266aa3c86c9585cbedb 176 PRINTS PR01100 Shikimate kinase family signature 57 65 7.6E-24 T 01-11-2018 D3790_02905 1eeeacd222bc7266aa3c86c9585cbedb 176 PRINTS PR01100 Shikimate kinase family signature 5 20 7.6E-24 T 01-11-2018 D3790_02905 1eeeacd222bc7266aa3c86c9585cbedb 176 PRINTS PR01100 Shikimate kinase family signature 74 83 7.6E-24 T 01-11-2018 D3790_02905 1eeeacd222bc7266aa3c86c9585cbedb 176 Gene3D G3DSA:3.40.50.300 1 169 1.8E-52 T 01-11-2018 D3790_15295 cf19202a0d347786f5d0b6c3034b0f29 323 Pfam PF05036 Sporulation related domain 240 313 1.6E-4 T 01-11-2018 IPR007730 Sporulation-like domain GO:0042834 D3790_15295 cf19202a0d347786f5d0b6c3034b0f29 323 Hamap MF_02021 Cell division protein DamX [damX]. 1 323 22.74 T 01-11-2018 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 D3790_15295 cf19202a0d347786f5d0b6c3034b0f29 323 Gene3D G3DSA:3.30.70.1070 217 322 4.8E-29 T 01-11-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D3790_04055 11ec4e263619ba8d34a903324c73c9cf 704 SUPERFAMILY SSF69279 270 443 6.63E-40 T 01-11-2018 D3790_04055 11ec4e263619ba8d34a903324c73c9cf 704 Gene3D G3DSA:3.55.50.10 178 269 6.7E-93 T 01-11-2018 D3790_04055 11ec4e263619ba8d34a903324c73c9cf 704 SUPERFAMILY SSF69255 442 529 4.71E-34 T 01-11-2018 D3790_04055 11ec4e263619ba8d34a903324c73c9cf 704 SUPERFAMILY SSF69279 90 265 1.19E-57 T 01-11-2018 D3790_04055 11ec4e263619ba8d34a903324c73c9cf 704 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 102 581 1.7E-166 T 01-11-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein D3790_04055 11ec4e263619ba8d34a903324c73c9cf 704 Gene3D G3DSA:3.30.1920.30 301 364 6.7E-93 T 01-11-2018 D3790_04055 11ec4e263619ba8d34a903324c73c9cf 704 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 90 598 1.7E-193 T 01-11-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset D3790_04055 11ec4e263619ba8d34a903324c73c9cf 704 Gene3D G3DSA:2.30.110.50 99 408 6.7E-93 T 01-11-2018 D3790_04055 11ec4e263619ba8d34a903324c73c9cf 704 SUPERFAMILY SSF69349 520 704 5.96E-39 T 01-11-2018 D3790_04055 11ec4e263619ba8d34a903324c73c9cf 704 Pfam PF05954 Phage late control gene D protein (GPD) 109 407 1.6E-84 T 01-11-2018 D3790_04055 11ec4e263619ba8d34a903324c73c9cf 704 Gene3D G3DSA:2.40.50.230 435 534 2.0E-42 T 01-11-2018 IPR037026 Vgr protein, OB-fold domain superfamily D3790_14830 0b68fd99af74736b9a657913908e2269 312 SUPERFAMILY SSF51735 1 308 4.8E-66 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_14830 0b68fd99af74736b9a657913908e2269 312 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 311 49.638 T 01-11-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 D3790_14830 0b68fd99af74736b9a657913908e2269 312 Gene3D G3DSA:3.90.25.10 168 292 2.2E-123 T 01-11-2018 D3790_14830 0b68fd99af74736b9a657913908e2269 312 Gene3D G3DSA:3.40.50.720 3 304 2.2E-123 T 01-11-2018 D3790_14830 0b68fd99af74736b9a657913908e2269 312 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 4.8E-47 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 D3790_14830 0b68fd99af74736b9a657913908e2269 312 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 310 3.6E-137 T 01-11-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 D3790_05595 91caaa44537d6281edb35c5874c30ee0 330 Gene3D G3DSA:3.40.50.300 2 329 9.9E-76 T 01-11-2018 D3790_05595 91caaa44537d6281edb35c5874c30ee0 330 SUPERFAMILY SSF52540 3 265 7.68E-52 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_05595 91caaa44537d6281edb35c5874c30ee0 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.8E-20 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 D3790_05595 91caaa44537d6281edb35c5874c30ee0 330 Pfam PF00005 ABC transporter 24 187 1.4E-27 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_05595 91caaa44537d6281edb35c5874c30ee0 330 SMART SM00382 32 235 1.3E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_05595 91caaa44537d6281edb35c5874c30ee0 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 7.2E-16 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 D3790_17005 3ac5e9e9f47afaa1085cdeb0bcf60f63 290 Pfam PF13592 Winged helix-turn helix 103 161 9.6E-17 T 01-11-2018 IPR025959 Winged helix-turn helix domain D3790_17005 3ac5e9e9f47afaa1085cdeb0bcf60f63 290 Gene3D G3DSA:3.30.420.470 139 284 4.5E-6 T 01-11-2018 D3790_17005 3ac5e9e9f47afaa1085cdeb0bcf60f63 290 Pfam PF13384 Homeodomain-like domain 20 64 5.5E-11 T 01-11-2018 D3790_17005 3ac5e9e9f47afaa1085cdeb0bcf60f63 290 SUPERFAMILY SSF46689 16 136 2.51E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_17005 3ac5e9e9f47afaa1085cdeb0bcf60f63 290 Pfam PF13358 DDE superfamily endonuclease 176 284 4.6E-23 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_16200 be85f46d3dfbf818b485b33e5f57a3d1 186 Gene3D G3DSA:1.10.357.10 5 183 2.8E-36 T 01-11-2018 D3790_16200 be85f46d3dfbf818b485b33e5f57a3d1 186 SUPERFAMILY SSF46689 2 81 2.1E-15 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_16200 be85f46d3dfbf818b485b33e5f57a3d1 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 1.2E-10 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D3790_16200 be85f46d3dfbf818b485b33e5f57a3d1 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.5E-5 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D3790_16200 be85f46d3dfbf818b485b33e5f57a3d1 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.5E-5 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D3790_14745 338d07184146d2154a2424dfc487b7cf 372 Pfam PF00534 Glycosyl transferases group 1 182 343 5.9E-36 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 D3790_14745 338d07184146d2154a2424dfc487b7cf 372 Gene3D G3DSA:3.40.50.2000 29 364 4.3E-75 T 01-11-2018 D3790_14745 338d07184146d2154a2424dfc487b7cf 372 Pfam PF13439 Glycosyltransferase Family 4 17 173 4.1E-20 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D3790_14745 338d07184146d2154a2424dfc487b7cf 372 Gene3D G3DSA:3.40.50.2000 169 351 4.3E-75 T 01-11-2018 D3790_14745 338d07184146d2154a2424dfc487b7cf 372 SUPERFAMILY SSF53756 8 364 1.3E-77 T 01-11-2018 D3790_08745 d70ef716bea6941f0e534b2d1fc32b0f 396 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 320 3.9E-17 T 01-11-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 D3790_08745 d70ef716bea6941f0e534b2d1fc32b0f 396 Gene3D G3DSA:3.40.50.300 193 335 3.7E-25 T 01-11-2018 D3790_08745 d70ef716bea6941f0e534b2d1fc32b0f 396 SUPERFAMILY SSF52540 196 362 1.83E-20 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_08745 d70ef716bea6941f0e534b2d1fc32b0f 396 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 163 3.5E-63 T 01-11-2018 IPR022161 DNA helicase IV, N-terminal domain D3790_03015 483ed8d6dd3292288090cfba3aac35e0 364 PIRSF PIRSF001361 1 356 1.5E-160 T 01-11-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 D3790_03015 483ed8d6dd3292288090cfba3aac35e0 364 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 350 1.1E-162 T 01-11-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 D3790_03015 483ed8d6dd3292288090cfba3aac35e0 364 SUPERFAMILY SSF51569 10 348 1.05E-133 T 01-11-2018 D3790_03015 483ed8d6dd3292288090cfba3aac35e0 364 Pfam PF00793 DAHP synthetase I family 43 342 2.0E-98 T 01-11-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 D3790_03015 483ed8d6dd3292288090cfba3aac35e0 364 Gene3D G3DSA:3.20.20.70 5 352 4.3E-152 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_19310 8793f4da8b09744dbe145031b939f217 425 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 422 3.5E-148 T 01-11-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 D3790_19310 8793f4da8b09744dbe145031b939f217 425 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 422 3.8E-73 T 01-11-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 D3790_19310 8793f4da8b09744dbe145031b939f217 425 Pfam PF07670 Nucleoside recognition 99 195 2.7E-8 T 01-11-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 D3790_19310 8793f4da8b09744dbe145031b939f217 425 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 8.8E-23 T 01-11-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 D3790_03285 fb72daca29b408bbc46b9fe933b11291 509 Pfam PF00795 Carbon-nitrogen hydrolase 224 475 3.4E-41 T 01-11-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 D3790_03285 fb72daca29b408bbc46b9fe933b11291 509 SUPERFAMILY SSF56317 215 489 6.8E-45 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D3790_03285 fb72daca29b408bbc46b9fe933b11291 509 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 494 24.355 T 01-11-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 D3790_03285 fb72daca29b408bbc46b9fe933b11291 509 Gene3D G3DSA:3.60.110.10 220 476 1.6E-14 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D3790_03285 fb72daca29b408bbc46b9fe933b11291 509 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 457 1.0E-110 T 01-11-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 D3790_12780 11915fb003a72554504c10373e723bd7 208 Pfam PF07947 YhhN family 26 206 6.9E-28 T 01-11-2018 IPR012506 YhhN-like GO:0016021 D3790_18825 a384f0e9c0f15a9536c4aa48547d2f3e 278 Pfam PF13657 HipA N-terminal domain 16 108 4.7E-17 T 01-11-2018 IPR017508 HipA, N-terminal subdomain 1 D3790_18825 a384f0e9c0f15a9536c4aa48547d2f3e 278 Pfam PF07804 HipA-like C-terminal domain 148 248 2.1E-20 T 01-11-2018 IPR012893 HipA-like, C-terminal D3790_00290 7ccf0fd0ce47521c5ff5d9d5b4d40fc6 145 Pfam PF13358 DDE superfamily endonuclease 1 131 3.5E-31 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_00290 7ccf0fd0ce47521c5ff5d9d5b4d40fc6 145 Gene3D G3DSA:3.30.420.470 1 143 8.4E-18 T 01-11-2018 D3790_12455 7ccf0fd0ce47521c5ff5d9d5b4d40fc6 145 Pfam PF13358 DDE superfamily endonuclease 1 131 3.5E-31 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_12455 7ccf0fd0ce47521c5ff5d9d5b4d40fc6 145 Gene3D G3DSA:3.30.420.470 1 143 8.4E-18 T 01-11-2018 D3790_09930 1a0335fc97b3ad2e039127289fb6aa7e 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 1.4E-20 T 01-11-2018 IPR025161 Putative transposase IS4/IS5 family D3790_09930 1a0335fc97b3ad2e039127289fb6aa7e 253 Pfam PF13586 Transposase DDE domain 163 248 5.7E-18 T 01-11-2018 IPR025668 Transposase DDE domain D3790_17320 1a0335fc97b3ad2e039127289fb6aa7e 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 1.4E-20 T 01-11-2018 IPR025161 Putative transposase IS4/IS5 family D3790_17320 1a0335fc97b3ad2e039127289fb6aa7e 253 Pfam PF13586 Transposase DDE domain 163 248 5.7E-18 T 01-11-2018 IPR025668 Transposase DDE domain D3790_05105 512b27e61b0a8e50c21719f5818afd5b 47 Pfam PF10848 Protein of unknown function (DUF2655) 13 46 1.4E-5 T 01-11-2018 IPR020371 Uncharacterised protein family YceQ D3790_11810 a625ea9110745c49009b1c5dea3eda57 140 SUPERFAMILY SSF53335 11 80 1.09E-14 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_11810 a625ea9110745c49009b1c5dea3eda57 140 Gene3D G3DSA:3.40.50.150 3 116 1.5E-17 T 01-11-2018 D3790_17010 87d64bdb7e1cbbfd55d7cda797c1bcbf 143 Pfam PF00665 Integrase core domain 41 127 1.8E-16 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 D3790_17010 87d64bdb7e1cbbfd55d7cda797c1bcbf 143 SUPERFAMILY SSF53098 40 141 2.43E-20 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_16590 a14f117d2a16ff1fa50fffe1bcf2d769 462 TIGRFAM TIGR03173 pbuX: xanthine permease 38 458 3.5E-127 T 01-11-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 D3790_16590 a14f117d2a16ff1fa50fffe1bcf2d769 462 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 374 394 - T 01-11-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 D3790_16590 a14f117d2a16ff1fa50fffe1bcf2d769 462 Pfam PF00860 Permease family 34 425 3.7E-108 T 01-11-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 D3790_16590 a14f117d2a16ff1fa50fffe1bcf2d769 462 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 456 6.8E-137 T 01-11-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 D3790_11205 65fe0a6a18933f3bf29899468b8c9159 238 Pfam PF10014 2OG-Fe dioxygenase 36 231 1.1E-41 T 01-11-2018 IPR018724 2OG-Fe dioxygenase D3790_11205 65fe0a6a18933f3bf29899468b8c9159 238 Gene3D G3DSA:2.60.120.620 1 236 2.7E-51 T 01-11-2018 D3790_09130 d9f12e007bce6a91f2fecc731d873010 209 Pfam PF11363 Protein of unknown function (DUF3164) 14 207 2.2E-79 T 01-11-2018 IPR021505 Bacteriophage B3, Orf6 D3790_14000 822dee7893320bc4d3bc186e360ac1e0 85 Pfam PF13710 ACT domain 13 72 8.4E-26 T 01-11-2018 D3790_14000 822dee7893320bc4d3bc186e360ac1e0 85 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 70 0.001 T 01-11-2018 D3790_14000 822dee7893320bc4d3bc186e360ac1e0 85 SUPERFAMILY SSF55021 2 75 5.49E-11 T 01-11-2018 D3790_14000 822dee7893320bc4d3bc186e360ac1e0 85 Gene3D G3DSA:3.30.70.260 1 85 8.1E-9 T 01-11-2018 D3790_04265 bbf5a24fdacc543cf61d19c085df2a72 266 Pfam PF01925 Sulfite exporter TauE/SafE 14 249 2.1E-43 T 01-11-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 D3790_11570 02e5d4a1bcd9d126821f4ab6189db2cb 810 Pfam PF02687 FtsX-like permease family 716 802 2.7E-7 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 D3790_00915 41ee4b5b765b3d2740cdefe3af3a6452 145 Pfam PF13551 Winged helix-turn helix 18 78 1.6E-11 T 01-11-2018 D3790_00915 41ee4b5b765b3d2740cdefe3af3a6452 145 SUPERFAMILY SSF46689 7 120 3.05E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_17520 4e21fc8e4fe4b4088503afc00dbbee32 182 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 23 162 1.8E-45 T 01-11-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 D3790_17520 4e21fc8e4fe4b4088503afc00dbbee32 182 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 3 163 23.354 T 01-11-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 D3790_17520 4e21fc8e4fe4b4088503afc00dbbee32 182 Pfam PF03968 OstA-like protein 34 143 1.1E-27 T 01-11-2018 IPR005653 Organic solvent tolerance-like, N-terminal D3790_17520 4e21fc8e4fe4b4088503afc00dbbee32 182 Gene3D G3DSA:2.60.450.10 23 160 2.9E-48 T 01-11-2018 D3790_11720 dee0cf681d60e926f834465bc3517d3f 825 Pfam PF14814 Bifunctional transglycosylase second domain 120 204 8.8E-28 T 01-11-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_11720 dee0cf681d60e926f834465bc3517d3f 825 SUPERFAMILY SSF56601 369 775 1.18E-104 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like D3790_11720 dee0cf681d60e926f834465bc3517d3f 825 Pfam PF00912 Transglycosylase 214 387 6.6E-57 T 01-11-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_11720 dee0cf681d60e926f834465bc3517d3f 825 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 86 2.3E-29 T 01-11-2018 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain D3790_11720 dee0cf681d60e926f834465bc3517d3f 825 Gene3D G3DSA:3.30.2060.10 118 207 1.6E-258 T 01-11-2018 D3790_11720 dee0cf681d60e926f834465bc3517d3f 825 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 74 801 0.0 T 01-11-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_11720 dee0cf681d60e926f834465bc3517d3f 825 SUPERFAMILY SSF53955 204 411 7.03E-65 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily D3790_11720 dee0cf681d60e926f834465bc3517d3f 825 Gene3D G3DSA:1.20.5.100 61 103 1.5E-13 T 01-11-2018 D3790_11720 dee0cf681d60e926f834465bc3517d3f 825 Gene3D G3DSA:3.40.710.10 110 768 1.6E-258 T 01-11-2018 D3790_11720 dee0cf681d60e926f834465bc3517d3f 825 Gene3D G3DSA:1.10.3810.10 208 411 1.6E-258 T 01-11-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_11720 dee0cf681d60e926f834465bc3517d3f 825 PIRSF PIRSF002799 44 825 0.0 T 01-11-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D3790_11720 dee0cf681d60e926f834465bc3517d3f 825 Pfam PF00905 Penicillin binding protein transpeptidase domain 479 728 2.0E-22 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 D3790_04915 38dc4ee821c7cc11553ad9c7f7fb5b74 241 Pfam PF01609 Transposase DDE domain 33 135 5.6E-10 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_08005 6c14f53994692056cc42412db5ed7029 145 Pfam PF13551 Winged helix-turn helix 18 78 6.3E-12 T 01-11-2018 D3790_08005 6c14f53994692056cc42412db5ed7029 145 SUPERFAMILY SSF46689 13 120 2.45E-6 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_07315 64aa8f28cb9f1955088c930fc5d27e7f 110 Pfam PF00893 Small Multidrug Resistance protein 10 100 2.8E-23 T 01-11-2018 IPR000390 Small multidrug resistance protein family GO:0016021 D3790_07315 64aa8f28cb9f1955088c930fc5d27e7f 110 Gene3D G3DSA:1.10.3730.20 8 110 6.9E-25 T 01-11-2018 D3790_07315 64aa8f28cb9f1955088c930fc5d27e7f 110 SUPERFAMILY SSF103481 12 109 1.11E-15 T 01-11-2018 D3790_14335 590a67543babe6a4f5e370dcf9e69ed8 318 Pfam PF01548 Transposase 7 152 3.3E-18 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D3790_14335 590a67543babe6a4f5e370dcf9e69ed8 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 194 277 3.7E-18 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D3790_19510 2299adfbdea525a95dff8f4df1782710 333 Pfam PF01618 MotA/TolQ/ExbB proton channel family 192 301 6.2E-35 T 01-11-2018 IPR002898 MotA/TolQ/ExbB proton channel D3790_19510 2299adfbdea525a95dff8f4df1782710 333 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 107 318 2.6E-90 T 01-11-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0016020|GO:0022857|GO:0055085 D3790_05825 74b8822a43a9e0afb39757a57437cd34 1493 Pfam PF12255 Insecticide toxin TcdB middle/C-terminal region 885 1031 6.7E-52 T 01-11-2018 IPR022044 Insecticide toxin TcdB middle/C-terminal D3790_05825 74b8822a43a9e0afb39757a57437cd34 1493 Pfam PF12256 Insecticide toxin TcdB middle/N-terminal region 660 812 5.7E-32 T 01-11-2018 IPR022045 Insecticide toxin TcdB middle/N-terminal D3790_05825 74b8822a43a9e0afb39757a57437cd34 1493 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 32 332 1.4E-101 T 01-11-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 D3790_05825 74b8822a43a9e0afb39757a57437cd34 1493 SUPERFAMILY SSF69318 458 649 4.84E-16 T 01-11-2018 D3790_05825 74b8822a43a9e0afb39757a57437cd34 1493 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 194 212 1.4E-32 T 01-11-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 D3790_05825 74b8822a43a9e0afb39757a57437cd34 1493 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 313 331 1.4E-32 T 01-11-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 D3790_05825 74b8822a43a9e0afb39757a57437cd34 1493 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 88 104 1.4E-32 T 01-11-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 D3790_05825 74b8822a43a9e0afb39757a57437cd34 1493 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 29 50 1.4E-32 T 01-11-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 D3790_05825 74b8822a43a9e0afb39757a57437cd34 1493 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 128 146 1.4E-32 T 01-11-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 D3790_05725 cb8434918aa25afc67f342bb93d82dc4 120 SUPERFAMILY SSF81324 14 100 8.24E-7 T 01-11-2018 D3790_11585 3d5ee38f1feb7fd7e0fe0554b2d5cee4 355 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 32.302 T 01-11-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 D3790_11585 3d5ee38f1feb7fd7e0fe0554b2d5cee4 355 Pfam PF02222 ATP-grasp domain 88 254 1.6E-53 T 01-11-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type D3790_11585 3d5ee38f1feb7fd7e0fe0554b2d5cee4 355 Gene3D G3DSA:3.30.1490.20 79 148 4.4E-12 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D3790_11585 3d5ee38f1feb7fd7e0fe0554b2d5cee4 355 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 327 8.0E-108 T 01-11-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 D3790_11585 3d5ee38f1feb7fd7e0fe0554b2d5cee4 355 SUPERFAMILY SSF56059 79 274 5.48E-57 T 01-11-2018 D3790_11585 3d5ee38f1feb7fd7e0fe0554b2d5cee4 355 Gene3D G3DSA:3.30.470.20 149 355 8.6E-78 T 01-11-2018 D3790_11585 3d5ee38f1feb7fd7e0fe0554b2d5cee4 355 SUPERFAMILY SSF52440 2 74 9.35E-15 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily D3790_11585 3d5ee38f1feb7fd7e0fe0554b2d5cee4 355 Gene3D G3DSA:3.40.50.20 1 70 1.1E-30 T 01-11-2018 D3790_11585 3d5ee38f1feb7fd7e0fe0554b2d5cee4 355 SUPERFAMILY SSF51246 278 353 1.49E-18 T 01-11-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 D3790_13480 11daf0cab1e8436b73c49ff565f815b5 1270 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 935 1270 3.9E-69 T 01-11-2018 IPR007452 Translocation and assembly module TamB D3790_05320 5148471141d941522930811c96c802ec 160 Pfam PF16743 Periplasmic lysozyme inhibitor of I-type lysozyme 27 149 1.5E-45 T 01-11-2018 IPR031948 Periplasmic lysozyme inhibitor, I-type D3790_05320 5148471141d941522930811c96c802ec 160 Gene3D G3DSA:2.40.128.460 29 158 1.7E-34 T 01-11-2018 IPR038643 PliI superfamily D3790_19025 66b0c85e7f189a36eb381ca304dbe071 483 Pfam PF02386 Cation transport protein 37 477 3.4E-90 T 01-11-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 D3790_19025 66b0c85e7f189a36eb381ca304dbe071 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 1.2E-126 T 01-11-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 D3790_19025 66b0c85e7f189a36eb381ca304dbe071 483 PIRSF PIRSF006247 1 483 1.3E-184 T 01-11-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 D3790_11655 e63896f16f28bd97eb396d8a4dacd8db 256 PIRSF PIRSF006648 8 252 5.2E-21 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 D3790_11655 e63896f16f28bd97eb396d8a4dacd8db 256 Pfam PF01061 ABC-2 type transporter 9 218 1.3E-35 T 01-11-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 D3790_11655 e63896f16f28bd97eb396d8a4dacd8db 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 6.5E-6 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 D3790_11655 e63896f16f28bd97eb396d8a4dacd8db 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 6.5E-6 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 D3790_11655 e63896f16f28bd97eb396d8a4dacd8db 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 6.5E-6 T 01-11-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 D3790_17015 a87088fcbe5d5dcb76b90b5d4749fc6f 122 Pfam PF13276 HTH-like domain 38 91 9.7E-9 T 01-11-2018 IPR025948 HTH-like domain D3790_02515 175e089b091086266c7af20f8721f037 328 Pfam PF04311 Protein of unknown function (DUF459) 149 309 2.2E-16 T 01-11-2018 IPR007407 Protein of unknown function DUF459 D3790_02515 175e089b091086266c7af20f8721f037 328 Gene3D G3DSA:3.40.50.1110 142 316 9.1E-13 T 01-11-2018 IPR036514 SGNH hydrolase superfamily D3790_02515 175e089b091086266c7af20f8721f037 328 SUPERFAMILY SSF52266 165 297 1.07E-15 T 01-11-2018 D3790_11820 c0e1f43d557c98f227fe11b56a2932fd 386 Pfam PF01609 Transposase DDE domain 109 350 1.2E-16 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_11820 c0e1f43d557c98f227fe11b56a2932fd 386 Pfam PF13808 DDE_Tnp_1-associated 16 101 1.1E-32 T 01-11-2018 IPR032806 H repeat-associated protein, N-terminal D3790_07530 e7d8d983b30c5e02a3654bbad6359977 257 SUPERFAMILY SSF53474 8 256 6.93E-43 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_07530 e7d8d983b30c5e02a3654bbad6359977 257 Pfam PF00561 alpha/beta hydrolase fold 31 142 4.5E-13 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 D3790_07530 e7d8d983b30c5e02a3654bbad6359977 257 Gene3D G3DSA:3.40.50.1820 6 257 2.0E-43 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_10135 6815a32ec28982b51127f4453a542d8d 383 Gene3D G3DSA:1.20.1090.10 186 383 1.4E-76 T 01-11-2018 D3790_10135 6815a32ec28982b51127f4453a542d8d 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 260 280 - T 01-11-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 D3790_10135 6815a32ec28982b51127f4453a542d8d 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 01-11-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 D3790_10135 6815a32ec28982b51127f4453a542d8d 383 SUPERFAMILY SSF56796 5 382 1.83E-134 T 01-11-2018 D3790_10135 6815a32ec28982b51127f4453a542d8d 383 Gene3D G3DSA:3.40.50.1970 1 184 2.2E-54 T 01-11-2018 D3790_10135 6815a32ec28982b51127f4453a542d8d 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 14 375 9.5E-126 T 01-11-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 D3790_17940 0c7436be25a108b86c4b68f8f68ad0c2 87 Gene3D G3DSA:1.10.260.40 1 72 2.3E-33 T 01-11-2018 D3790_17940 0c7436be25a108b86c4b68f8f68ad0c2 87 SUPERFAMILY SSF47413 2 71 1.74E-30 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_17940 0c7436be25a108b86c4b68f8f68ad0c2 87 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 80 3.4E-38 T 01-11-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain D3790_01445 31df0dd377b6d20deadb4bd98e7fea0f 97 PRINTS PR00297 10kDa chaperonin signature 60 72 8.3E-28 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D3790_01445 31df0dd377b6d20deadb4bd98e7fea0f 97 PRINTS PR00297 10kDa chaperonin signature 3 18 8.3E-28 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D3790_01445 31df0dd377b6d20deadb4bd98e7fea0f 97 PRINTS PR00297 10kDa chaperonin signature 25 46 8.3E-28 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D3790_01445 31df0dd377b6d20deadb4bd98e7fea0f 97 PRINTS PR00297 10kDa chaperonin signature 82 95 8.3E-28 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D3790_01445 31df0dd377b6d20deadb4bd98e7fea0f 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 3.8E-29 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D3790_01445 31df0dd377b6d20deadb4bd98e7fea0f 97 Gene3D G3DSA:2.30.33.40 1 97 4.0E-36 T 01-11-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 D3790_01445 31df0dd377b6d20deadb4bd98e7fea0f 97 SMART SM00883 2 95 5.0E-49 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D3790_01445 31df0dd377b6d20deadb4bd98e7fea0f 97 SUPERFAMILY SSF50129 1 96 1.14E-30 T 01-11-2018 IPR011032 GroES-like superfamily D3790_01445 31df0dd377b6d20deadb4bd98e7fea0f 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 01-11-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 D3790_01445 31df0dd377b6d20deadb4bd98e7fea0f 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.72 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D3790_14690 3c97c7798f80f23e20e8acbeb6af2b39 254 SUPERFAMILY SSF56349 2 224 1.74E-45 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_14690 3c97c7798f80f23e20e8acbeb6af2b39 254 Pfam PF00589 Phage integrase family 45 215 7.2E-14 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D3790_14690 3c97c7798f80f23e20e8acbeb6af2b39 254 Gene3D G3DSA:1.10.150.130 1 44 1.8E-11 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal D3790_14690 3c97c7798f80f23e20e8acbeb6af2b39 254 Gene3D G3DSA:1.10.443.10 45 230 3.0E-20 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_04185 829713cbefb99b27281708528933cca4 315 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 9.2E-39 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D3790_04185 829713cbefb99b27281708528933cca4 315 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 9.2E-39 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D3790_04185 829713cbefb99b27281708528933cca4 315 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 9.2E-39 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D3790_04185 829713cbefb99b27281708528933cca4 315 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 9.2E-39 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D3790_04185 829713cbefb99b27281708528933cca4 315 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 9.2E-39 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D3790_04185 829713cbefb99b27281708528933cca4 315 Gene3D G3DSA:3.90.226.10 25 287 1.8E-88 T 01-11-2018 D3790_04185 829713cbefb99b27281708528933cca4 315 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 3.9E-144 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D3790_04185 829713cbefb99b27281708528933cca4 315 Pfam PF01039 Carboxyl transferase domain 102 294 9.9E-15 T 01-11-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 D3790_04185 829713cbefb99b27281708528933cca4 315 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 38.051 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D3790_04185 829713cbefb99b27281708528933cca4 315 SUPERFAMILY SSF52096 25 283 1.15E-87 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily D3790_03500 2810532d2d94552d0408507af605701c 106 Gene3D G3DSA:2.30.30.110 1 106 3.3E-30 T 01-11-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor D3790_03500 2810532d2d94552d0408507af605701c 106 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 18 100 9.0E-8 T 01-11-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 D3790_03500 2810532d2d94552d0408507af605701c 106 Pfam PF01845 CcdB protein 3 104 7.7E-31 T 01-11-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 D3790_03500 2810532d2d94552d0408507af605701c 106 SUPERFAMILY SSF50118 3 104 5.23E-23 T 01-11-2018 D3790_19335 584d6960b45f81c3d22b4d8309e18b2c 179 Gene3D G3DSA:2.60.40.1090 31 178 2.6E-30 T 01-11-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 D3790_19335 584d6960b45f81c3d22b4d8309e18b2c 179 SUPERFAMILY SSF49401 31 178 3.78E-32 T 01-11-2018 IPR008966 Adhesion domain superfamily D3790_19335 584d6960b45f81c3d22b4d8309e18b2c 179 Pfam PF00419 Fimbrial protein 33 178 1.9E-12 T 01-11-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 D3790_04725 932d545b9066d5020276d43030923157 418 Pfam PF03611 PTS system sugar-specific permease component 10 405 2.2E-142 T 01-11-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 D3790_07905 70d95266f5b52208c3a15e6673327a93 250 Gene3D G3DSA:3.30.2010.10 59 149 2.0E-8 T 01-11-2018 D3790_07905 70d95266f5b52208c3a15e6673327a93 250 Pfam PF01435 Peptidase family M48 71 244 1.6E-27 T 01-11-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 D3790_12795 7b2ddc14cfe9b01839f5cefac435a538 221 Hamap MF_02088 Probable queuosine precursor transporter. 7 215 14.834 T 01-11-2018 IPR003744 Queuosine precursor transporter GO:1990397 D3790_12795 7b2ddc14cfe9b01839f5cefac435a538 221 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 203 8.3E-61 T 01-11-2018 IPR003744 Queuosine precursor transporter GO:1990397 D3790_12795 7b2ddc14cfe9b01839f5cefac435a538 221 Pfam PF02592 Putative vitamin uptake transporter 43 199 1.1E-33 T 01-11-2018 IPR003744 Queuosine precursor transporter GO:1990397 D3790_01220 e137afcb67deaec1fdde66c86f3390ec 228 Pfam PF02384 N-6 DNA Methylase 100 199 7.0E-5 T 01-11-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 D3790_01220 e137afcb67deaec1fdde66c86f3390ec 228 Gene3D G3DSA:3.40.50.150 81 217 2.6E-14 T 01-11-2018 D3790_01220 e137afcb67deaec1fdde66c86f3390ec 228 SUPERFAMILY SSF53335 36 199 9.21E-19 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_06215 0459af4245e3788a9c6265277e4b4ed2 105 Pfam PF01914 MarC family integral membrane protein 8 84 3.3E-21 T 01-11-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 D3790_13300 253c8fc1ea390a085d34d8728a6eb1dc 85 SUPERFAMILY SSF55718 19 49 5.59E-7 T 01-11-2018 IPR036527 SCP2 sterol-binding domain superfamily D3790_13300 253c8fc1ea390a085d34d8728a6eb1dc 85 Pfam PF02036 SCP-2 sterol transfer family 21 45 2.5E-4 T 01-11-2018 IPR003033 SCP2 sterol-binding domain D3790_18890 cf8b6f422fb7b6fccc75f72d22d09c4c 97 Pfam PF08681 Protein of unknown function (DUF1778) 8 87 1.9E-22 T 01-11-2018 IPR014795 Vibrio phage ICP1, Orf50 D3790_18890 cf8b6f422fb7b6fccc75f72d22d09c4c 97 SUPERFAMILY SSF47598 5 83 2.45E-18 T 01-11-2018 IPR010985 Ribbon-helix-helix GO:0006355 D3790_18890 cf8b6f422fb7b6fccc75f72d22d09c4c 97 Gene3D G3DSA:1.20.5.780 2 90 8.8E-25 T 01-11-2018 D3790_06110 67bc20637f2781670df61ea0e1049cf8 135 SMART SM01321 12 131 9.1E-39 T 01-11-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D3790_06110 67bc20637f2781670df61ea0e1049cf8 135 SUPERFAMILY SSF143422 3 131 4.71E-43 T 01-11-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D3790_06110 67bc20637f2781670df61ea0e1049cf8 135 Pfam PF01797 Transposase IS200 like 12 131 1.3E-38 T 01-11-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D3790_06110 67bc20637f2781670df61ea0e1049cf8 135 Gene3D G3DSA:3.30.70.1290 4 135 2.2E-40 T 01-11-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D3790_09305 d4072d1210440c25a53003fd89f026d2 148 PIRSF PIRSF019404 1 148 1.6E-48 T 01-11-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 D3790_09305 d4072d1210440c25a53003fd89f026d2 148 Pfam PF02050 Flagellar FliJ protein 19 140 3.0E-33 T 01-11-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 D3790_09305 d4072d1210440c25a53003fd89f026d2 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 143 4.1E-35 T 01-11-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 D3790_09305 d4072d1210440c25a53003fd89f026d2 148 PRINTS PR01004 Flagellar FliJ protein signature 86 107 3.0E-36 T 01-11-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 D3790_09305 d4072d1210440c25a53003fd89f026d2 148 PRINTS PR01004 Flagellar FliJ protein signature 27 43 3.0E-36 T 01-11-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 D3790_09305 d4072d1210440c25a53003fd89f026d2 148 PRINTS PR01004 Flagellar FliJ protein signature 126 146 3.0E-36 T 01-11-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 D3790_09305 d4072d1210440c25a53003fd89f026d2 148 PRINTS PR01004 Flagellar FliJ protein signature 4 26 3.0E-36 T 01-11-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 D3790_09305 d4072d1210440c25a53003fd89f026d2 148 PRINTS PR01004 Flagellar FliJ protein signature 44 61 3.0E-36 T 01-11-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 D3790_09305 d4072d1210440c25a53003fd89f026d2 148 PRINTS PR01004 Flagellar FliJ protein signature 63 84 3.0E-36 T 01-11-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 D3790_09305 d4072d1210440c25a53003fd89f026d2 148 PRINTS PR01004 Flagellar FliJ protein signature 108 126 3.0E-36 T 01-11-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 D3790_04690 8d6c2d7ed0450b9451c6adcb140a8222 161 Gene3D G3DSA:3.30.1330.60 24 160 1.2E-41 T 01-11-2018 IPR036737 OmpA-like domain superfamily D3790_04690 8d6c2d7ed0450b9451c6adcb140a8222 161 Pfam PF00691 OmpA family 58 152 5.6E-19 T 01-11-2018 IPR006665 OmpA-like domain D3790_04690 8d6c2d7ed0450b9451c6adcb140a8222 161 SUPERFAMILY SSF103088 44 158 1.31E-32 T 01-11-2018 IPR036737 OmpA-like domain superfamily D3790_04690 8d6c2d7ed0450b9451c6adcb140a8222 161 PRINTS PR01021 OMPA domain signature 88 103 6.0E-12 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D3790_04690 8d6c2d7ed0450b9451c6adcb140a8222 161 PRINTS PR01021 OMPA domain signature 58 80 6.0E-12 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D3790_04690 8d6c2d7ed0450b9451c6adcb140a8222 161 PRINTS PR01021 OMPA domain signature 103 119 6.0E-12 T 01-11-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D3790_00210 7d143a69288b78d7d7df264a32b8f365 41 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 2 40 9.0E-9 T 01-11-2018 IPR012912 Plasmid pRiA4b, Orf3 D3790_00210 7d143a69288b78d7d7df264a32b8f365 41 Gene3D G3DSA:3.10.290.30 1 41 1.4E-9 T 01-11-2018 IPR024047 MM3350-like superfamily D3790_00210 7d143a69288b78d7d7df264a32b8f365 41 SUPERFAMILY SSF159941 1 41 1.28E-10 T 01-11-2018 IPR024047 MM3350-like superfamily D3790_01595 9d494ce611a1288f1a96b0ec29495ffe 232 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 37 228 2.4E-78 T 01-11-2018 IPR022293 Integrating conjugative element protein, PFL4693 D3790_01550 344b6bdc42be03d80378fddcd0c8576e 336 Pfam PF01548 Transposase 1 136 2.5E-12 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D3790_01550 344b6bdc42be03d80378fddcd0c8576e 336 Pfam PF02371 Transposase IS116/IS110/IS902 family 207 285 2.8E-23 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D3790_03880 be2a6edf732cef2a1e4da4ed5e5d96c6 326 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 01-11-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D3790_03880 be2a6edf732cef2a1e4da4ed5e5d96c6 326 SMART SM00729 13 217 5.1E-4 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D3790_03880 be2a6edf732cef2a1e4da4ed5e5d96c6 326 SUPERFAMILY SSF102114 4 275 6.93E-70 T 01-11-2018 D3790_03880 be2a6edf732cef2a1e4da4ed5e5d96c6 326 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 326 1.2E-101 T 01-11-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D3790_03880 be2a6edf732cef2a1e4da4ed5e5d96c6 326 Pfam PF13353 4Fe-4S single cluster domain 22 122 1.1E-8 T 01-11-2018 D3790_03880 be2a6edf732cef2a1e4da4ed5e5d96c6 326 Gene3D G3DSA:3.20.20.70 1 326 1.3E-80 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_03880 be2a6edf732cef2a1e4da4ed5e5d96c6 326 Pfam PF04055 Radical SAM superfamily 18 178 1.8E-27 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D3790_03880 be2a6edf732cef2a1e4da4ed5e5d96c6 326 Pfam PF06463 Molybdenum Cofactor Synthesis C 183 309 1.7E-37 T 01-11-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D3790_03880 be2a6edf732cef2a1e4da4ed5e5d96c6 326 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 4 326 36.962 T 01-11-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D3790_12060 b16119c2883b36c509a70426063cd6ab 136 Pfam PF02627 Carboxymuconolactone decarboxylase family 41 119 7.6E-17 T 01-11-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 D3790_12060 b16119c2883b36c509a70426063cd6ab 136 Gene3D G3DSA:1.20.1290.10 2 127 2.9E-32 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 D3790_12060 b16119c2883b36c509a70426063cd6ab 136 SUPERFAMILY SSF69118 19 125 3.12E-28 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 D3790_12130 b0ef46fc994b5a411a595a648a88fd99 520 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 15 281 1.3E-89 T 01-11-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal D3790_12130 b0ef46fc994b5a411a595a648a88fd99 520 SUPERFAMILY SSF47203 272 493 2.01E-46 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 D3790_12130 b0ef46fc994b5a411a595a648a88fd99 520 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 289 489 5.7E-66 T 01-11-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal D3790_12130 b0ef46fc994b5a411a595a648a88fd99 520 Gene3D G3DSA:2.40.110.10 152 282 9.5E-38 T 01-11-2018 D3790_12130 b0ef46fc994b5a411a595a648a88fd99 520 PIRSF PIRSF500125 1 518 1.7E-277 T 01-11-2018 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein D3790_12130 b0ef46fc994b5a411a595a648a88fd99 520 SUPERFAMILY SSF56645 13 282 2.88E-79 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 D3790_12130 b0ef46fc994b5a411a595a648a88fd99 520 Gene3D G3DSA:1.10.3140.10 14 150 4.3E-42 T 01-11-2018 D3790_12130 b0ef46fc994b5a411a595a648a88fd99 520 Gene3D G3DSA:1.20.140.10 283 477 3.8E-66 T 01-11-2018 D3790_12130 b0ef46fc994b5a411a595a648a88fd99 520 PIRSF PIRSF000331 11 501 1.2E-192 T 01-11-2018 IPR004925 HpaB/PvcC/4-BUDH D3790_12130 b0ef46fc994b5a411a595a648a88fd99 520 TIGRFAM TIGR02310 HpaB-2: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 4 519 0.0 T 01-11-2018 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria GO:0010124|GO:0016712|GO:0050660 KEGG: 00350+1.14.14.9|MetaCyc: PWY-7431 D3790_06020 931009632b2adf572e1aed667e9f4e87 180 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 10 160 2.5E-57 T 01-11-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 D3790_06020 931009632b2adf572e1aed667e9f4e87 180 PIRSF PIRSF028301 1 177 7.0E-60 T 01-11-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 D3790_06020 931009632b2adf572e1aed667e9f4e87 180 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 161 2.9E-56 T 01-11-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 D3790_10025 b1a775e11daff72b63cc2af4b4fdb22a 222 SUPERFAMILY SSF161098 8 199 6.41E-27 T 01-11-2018 IPR035906 MetI-like superfamily D3790_10025 b1a775e11daff72b63cc2af4b4fdb22a 222 Gene3D G3DSA:1.10.3720.10 1 216 6.6E-36 T 01-11-2018 IPR035906 MetI-like superfamily D3790_10025 b1a775e11daff72b63cc2af4b4fdb22a 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 215 1.0E-15 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_10025 b1a775e11daff72b63cc2af4b4fdb22a 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 110 9.6E-14 T 01-11-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 D3790_10565 7fe481490a30113047d1da273ed21bb2 286 Gene3D G3DSA:3.30.230.10 26 127 1.7E-14 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3790_10565 7fe481490a30113047d1da273ed21bb2 286 PIRSF PIRSF033887 1 279 7.6E-64 T 01-11-2018 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related KEGG: 00860+2.7.1.177|MetaCyc: PWY-5443 D3790_10565 7fe481490a30113047d1da273ed21bb2 286 Pfam PF00288 GHMP kinases N terminal domain 72 120 1.3E-8 T 01-11-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 D3790_10565 7fe481490a30113047d1da273ed21bb2 286 SUPERFAMILY SSF54211 4 137 1.82E-19 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D3790_16880 5a84bdd3be65d3c31ca596ba70d15ba0 649 Pfam PF00005 ABC transporter 328 459 7.8E-25 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_16880 5a84bdd3be65d3c31ca596ba70d15ba0 649 Pfam PF00005 ABC transporter 17 178 5.0E-25 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_16880 5a84bdd3be65d3c31ca596ba70d15ba0 649 Pfam PF12848 ABC transporter 217 297 3.2E-29 T 01-11-2018 IPR032781 ABC-transporter extension domain D3790_16880 5a84bdd3be65d3c31ca596ba70d15ba0 649 Gene3D G3DSA:3.40.50.300 7 274 8.5E-62 T 01-11-2018 D3790_16880 5a84bdd3be65d3c31ca596ba70d15ba0 649 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_16880 5a84bdd3be65d3c31ca596ba70d15ba0 649 SUPERFAMILY SSF52540 2 250 2.21E-46 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16880 5a84bdd3be65d3c31ca596ba70d15ba0 649 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_16880 5a84bdd3be65d3c31ca596ba70d15ba0 649 Gene3D G3DSA:3.40.50.300 276 539 3.3E-57 T 01-11-2018 D3790_16880 5a84bdd3be65d3c31ca596ba70d15ba0 649 SUPERFAMILY SSF52540 294 517 9.41E-46 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_16880 5a84bdd3be65d3c31ca596ba70d15ba0 649 SMART SM00382 337 504 2.6E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_16880 5a84bdd3be65d3c31ca596ba70d15ba0 649 SMART SM00382 26 223 7.4E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_08690 a59fb49be59f6bd3c6acc6f78473d46d 158 Gene3D G3DSA:3.30.420.470 1 156 6.7E-19 T 01-11-2018 D3790_08690 a59fb49be59f6bd3c6acc6f78473d46d 158 Pfam PF13358 DDE superfamily endonuclease 11 144 6.2E-33 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_01310 0cad2ea4b0961ce75e0d9df2b4f3d55f 129 SUPERFAMILY SSF54593 15 126 7.7E-16 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D3790_01310 0cad2ea4b0961ce75e0d9df2b4f3d55f 129 Gene3D G3DSA:3.30.720.120 1 61 4.1E-28 T 01-11-2018 D3790_01310 0cad2ea4b0961ce75e0d9df2b4f3d55f 129 Pfam PF12681 Glyoxalase-like domain 13 126 1.2E-7 T 01-11-2018 IPR025870 Glyoxalase-like domain D3790_01310 0cad2ea4b0961ce75e0d9df2b4f3d55f 129 PIRSF PIRSF039020 9 129 9.9E-39 T 01-11-2018 IPR026275 Glyoxalase/dioxygenase/EhpR D3790_01310 0cad2ea4b0961ce75e0d9df2b4f3d55f 129 Gene3D G3DSA:3.30.720.110 73 129 6.2E-28 T 01-11-2018 D3790_13530 cde123c17be8f543baafb85f4e10e07a 272 Pfam PF11236 Protein of unknown function (DUF3037) 7 125 2.1E-22 T 01-11-2018 IPR021398 Protein of unknown function DUF3037 D3790_06905 4b54481f41843bfbbf32921ca6f796aa 179 Pfam PF12306 Inclusion body protein 4 173 3.0E-22 T 01-11-2018 IPR021087 Uncharacterised protein family PixA/AidA D3790_06905 4b54481f41843bfbbf32921ca6f796aa 179 Gene3D G3DSA:2.60.40.3910 1 175 4.5E-7 T 01-11-2018 IPR038712 PixA-like superfamily D3790_15235 d748390ecb37a71baeb774faafe7bba4 992 Gene3D G3DSA:2.170.130.10 60 188 8.2E-40 T 01-11-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D3790_15235 d748390ecb37a71baeb774faafe7bba4 992 Pfam PF00593 TonB dependent receptor 395 989 8.8E-30 T 01-11-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D3790_15235 d748390ecb37a71baeb774faafe7bba4 992 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 172 1.3E-12 T 01-11-2018 IPR012910 TonB-dependent receptor, plug domain D3790_15235 d748390ecb37a71baeb774faafe7bba4 992 SUPERFAMILY SSF56935 69 992 3.66E-70 T 01-11-2018 D3790_15670 c07355e85cda9edd10510f0d77fae1ad 92 Gene3D G3DSA:1.20.5.780 3 86 3.9E-17 T 01-11-2018 D3790_15670 c07355e85cda9edd10510f0d77fae1ad 92 Pfam PF08681 Protein of unknown function (DUF1778) 9 83 6.7E-26 T 01-11-2018 IPR014795 Vibrio phage ICP1, Orf50 D3790_15670 c07355e85cda9edd10510f0d77fae1ad 92 SUPERFAMILY SSF47598 5 82 4.82E-21 T 01-11-2018 IPR010985 Ribbon-helix-helix GO:0006355 D3790_10405 021d919fa86851e6c2b610bae0aeaaf3 205 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 19 82 9.0E-29 T 01-11-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 D3790_10405 021d919fa86851e6c2b610bae0aeaaf3 205 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 100 199 2.1E-37 T 01-11-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 D3790_10405 021d919fa86851e6c2b610bae0aeaaf3 205 Gene3D G3DSA:2.10.109.10 92 205 1.6E-32 T 01-11-2018 D3790_10405 021d919fa86851e6c2b610bae0aeaaf3 205 Gene3D G3DSA:1.10.260.40 16 84 3.2E-24 T 01-11-2018 D3790_19430 fdff611be38ead6764735bc77e900833 281 Pfam PF00892 EamA-like transporter family 146 278 2.1E-10 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D3790_19430 fdff611be38ead6764735bc77e900833 281 Pfam PF00892 EamA-like transporter family 7 131 1.3E-6 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D3790_19430 fdff611be38ead6764735bc77e900833 281 SUPERFAMILY SSF103481 180 280 1.83E-13 T 01-11-2018 D3790_19430 fdff611be38ead6764735bc77e900833 281 SUPERFAMILY SSF103481 37 136 1.2E-14 T 01-11-2018 D3790_19430 fdff611be38ead6764735bc77e900833 281 Gene3D G3DSA:1.10.3730.20 30 137 3.3E-5 T 01-11-2018 D3790_00885 9c9c556916ad8df6af7b102806e317ee 404 SUPERFAMILY SSF56349 99 380 2.33E-63 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_00885 9c9c556916ad8df6af7b102806e317ee 404 Pfam PF00589 Phage integrase family 207 370 8.4E-26 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D3790_00885 9c9c556916ad8df6af7b102806e317ee 404 Gene3D G3DSA:3.30.160.390 1 88 8.7E-33 T 01-11-2018 IPR038488 Integrase, DNA-binding domain superfamily D3790_00885 9c9c556916ad8df6af7b102806e317ee 404 Gene3D G3DSA:1.10.443.10 209 387 1.1E-20 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_00885 9c9c556916ad8df6af7b102806e317ee 404 Gene3D G3DSA:1.10.150.130 96 208 4.3E-30 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal D3790_00885 9c9c556916ad8df6af7b102806e317ee 404 Pfam PF13356 Arm DNA-binding domain 3 87 5.2E-18 T 01-11-2018 IPR025166 Integrase, DNA-binding domain D3790_00330 41beda01af86a00008978310e42e86ca 124 Pfam PF11990 Protein of unknown function (DUF3487) 2 114 4.9E-42 T 01-11-2018 IPR021877 Protein of unknown function DUF3487 D3790_00330 41beda01af86a00008978310e42e86ca 124 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 4 113 2.0E-40 T 01-11-2018 IPR021877 Protein of unknown function DUF3487 D3790_00785 41beda01af86a00008978310e42e86ca 124 Pfam PF11990 Protein of unknown function (DUF3487) 2 114 4.9E-42 T 01-11-2018 IPR021877 Protein of unknown function DUF3487 D3790_00785 41beda01af86a00008978310e42e86ca 124 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 4 113 2.0E-40 T 01-11-2018 IPR021877 Protein of unknown function DUF3487 D3790_17670 5cb0751edd216887e0f44e97bbdf0378 191 Pfam PF04972 BON domain 46 113 8.7E-14 T 01-11-2018 IPR007055 BON domain D3790_17670 5cb0751edd216887e0f44e97bbdf0378 191 Pfam PF04972 BON domain 124 189 6.0E-15 T 01-11-2018 IPR007055 BON domain D3790_17670 5cb0751edd216887e0f44e97bbdf0378 191 SMART SM00749 129 190 0.081 T 01-11-2018 IPR014004 Transport-associated and nodulation domain, bacteria D3790_17670 5cb0751edd216887e0f44e97bbdf0378 191 SMART SM00749 51 114 1.0E-8 T 01-11-2018 IPR014004 Transport-associated and nodulation domain, bacteria D3790_05835 8ed19edf9ec5b0acadfa1bd5d428b1f2 2523 Pfam PF03538 Salmonella virulence plasmid 28.1kDa A protein 52 226 2.0E-16 T 01-11-2018 IPR018003 Insecticidal toxin complex/plasmid virulence protein D3790_07175 ff965b2cedce0564d8f904577bc5c2f7 74 Pfam PF13617 YnbE-like lipoprotein 21 72 3.2E-24 T 01-11-2018 IPR025985 YnbE-like lipoprotein D3790_07175 ff965b2cedce0564d8f904577bc5c2f7 74 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 28 74 8.0E-17 T 01-11-2018 D3790_09065 271e5fa808183794b73a7af24a4ba1e3 97 ProDom PD283729 GP25 PHAGE SO2675 MEMBRANE MU-LIKE TRANSMEMBRANE HI1498 ECS4966 6 75 1.0E-10 T 01-11-2018 IPR020269 Bacteriophage Mu, Gp25 D3790_09065 271e5fa808183794b73a7af24a4ba1e3 97 Pfam PF10805 Protein of unknown function (DUF2730) 1 94 1.6E-32 T 01-11-2018 IPR020269 Bacteriophage Mu, Gp25 D3790_05855 51ce3ae3f332c567503b7970e2f293b4 648 Pfam PF00704 Glycosyl hydrolases family 18 156 603 1.7E-60 T 01-11-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 D3790_05855 51ce3ae3f332c567503b7970e2f293b4 648 Gene3D G3DSA:3.20.20.80 141 635 7.3E-216 T 01-11-2018 D3790_05855 51ce3ae3f332c567503b7970e2f293b4 648 SMART SM00636 154 603 6.8E-69 T 01-11-2018 IPR011583 Chitinase II GO:0008061 D3790_05855 51ce3ae3f332c567503b7970e2f293b4 648 Gene3D G3DSA:3.10.50.10 109 574 7.3E-216 T 01-11-2018 IPR029070 Chitinase insertion domain superfamily D3790_05855 51ce3ae3f332c567503b7970e2f293b4 648 SUPERFAMILY SSF51445 154 605 1.11E-64 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily D3790_12275 8f56ac39d1060653c4e78b856f90b491 101 SUPERFAMILY SSF47413 5 72 7.93E-21 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_12275 8f56ac39d1060653c4e78b856f90b491 101 Gene3D G3DSA:1.10.260.40 7 98 4.0E-17 T 01-11-2018 D3790_12275 8f56ac39d1060653c4e78b856f90b491 101 SMART SM00530 11 66 1.8E-13 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_12275 8f56ac39d1060653c4e78b856f90b491 101 Pfam PF01381 Helix-turn-helix 12 65 1.5E-13 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_01295 d3cb9831f5acbe25989c543dde55b65b 1079 SUPERFAMILY SSF52540 434 726 1.43E-8 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_01295 d3cb9831f5acbe25989c543dde55b65b 1079 Pfam PF04851 Type III restriction enzyme, res subunit 312 490 6.3E-17 T 01-11-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 D3790_01295 d3cb9831f5acbe25989c543dde55b65b 1079 SMART SM00487 269 521 1.5E-4 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3790_01295 d3cb9831f5acbe25989c543dde55b65b 1079 Gene3D G3DSA:3.90.1570.50 97 258 2.5E-34 T 01-11-2018 D3790_01295 d3cb9831f5acbe25989c543dde55b65b 1079 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 4 208 1.4E-45 T 01-11-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 D3790_01295 d3cb9831f5acbe25989c543dde55b65b 1079 Pfam PF11867 Domain of unknown function (DUF3387) 744 1074 3.9E-116 T 01-11-2018 IPR021810 Protein of unknown function DUF3387 D3790_01295 d3cb9831f5acbe25989c543dde55b65b 1079 Gene3D G3DSA:3.40.50.300 304 508 6.5E-47 T 01-11-2018 D3790_01295 d3cb9831f5acbe25989c543dde55b65b 1079 Gene3D G3DSA:3.40.50.300 509 746 2.4E-45 T 01-11-2018 D3790_01295 d3cb9831f5acbe25989c543dde55b65b 1079 SUPERFAMILY SSF52540 228 519 1.04E-21 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_01295 d3cb9831f5acbe25989c543dde55b65b 1079 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 314 742 2.4E-123 T 01-11-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 D3790_12590 fbdc45a27196122842d55f519f514ac7 389 Gene3D G3DSA:3.20.20.70 33 385 3.7E-114 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D3790_12590 fbdc45a27196122842d55f519f514ac7 389 Pfam PF01474 Class-II DAHP synthetase family 174 378 9.9E-64 T 01-11-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 D3790_12590 fbdc45a27196122842d55f519f514ac7 389 Pfam PF01474 Class-II DAHP synthetase family 12 166 4.5E-42 T 01-11-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 D3790_12590 fbdc45a27196122842d55f519f514ac7 389 SUPERFAMILY SSF51569 10 382 3.66E-113 T 01-11-2018 D3790_04770 609eb99c398734c26bf6a29e4dc06f11 175 Gene3D G3DSA:1.20.120.1200 1 160 4.8E-46 T 01-11-2018 D3790_04770 609eb99c398734c26bf6a29e4dc06f11 175 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 158 9.8E-32 T 01-11-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_12790 3af017973dad21c4d9228596ae372bdc 84 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.143 T 01-11-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 D3790_12790 3af017973dad21c4d9228596ae372bdc 84 Pfam PF01206 Sulfurtransferase TusA 11 79 3.3E-24 T 01-11-2018 IPR001455 TusA-like domain D3790_12790 3af017973dad21c4d9228596ae372bdc 84 SUPERFAMILY SSF64307 4 79 3.01E-25 T 01-11-2018 IPR036868 TusA-like domain superfamily D3790_12790 3af017973dad21c4d9228596ae372bdc 84 Gene3D G3DSA:3.30.110.40 1 80 4.0E-31 T 01-11-2018 IPR036868 TusA-like domain superfamily D3790_12790 3af017973dad21c4d9228596ae372bdc 84 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 01-11-2018 IPR001455 TusA-like domain D3790_01925 56f03fdef753810c29c50f64c7f465dc 161 SUPERFAMILY SSF46785 13 92 6.99E-6 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_04475 6b5e5264bacf512e8a1fb2795ac336ab 159 SUPERFAMILY SSF141452 4 152 1.96E-34 T 01-11-2018 IPR036624 Hcp1-like superfamily D3790_04475 6b5e5264bacf512e8a1fb2795ac336ab 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 143 2.3E-23 T 01-11-2018 IPR008514 Type VI secretion system effector, Hcp D3790_04475 6b5e5264bacf512e8a1fb2795ac336ab 159 Gene3D G3DSA:2.30.110.20 2 157 3.5E-52 T 01-11-2018 IPR036624 Hcp1-like superfamily D3790_04475 6b5e5264bacf512e8a1fb2795ac336ab 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 2 153 1.6E-58 T 01-11-2018 IPR008514 Type VI secretion system effector, Hcp D3790_03695 d23a32dfe3f0ff5678a319bdda67d869 523 PIRSF PIRSF006446 1 328 1.0E-114 T 01-11-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 D3790_03695 d23a32dfe3f0ff5678a319bdda67d869 523 PIRSF PIRSF006446 354 521 9.4E-30 T 01-11-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 D3790_03695 d23a32dfe3f0ff5678a319bdda67d869 523 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 4.4E-173 T 01-11-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 D3790_11300 6d7cb98748bfaf15b9df11c88cadb6d9 107 Gene3D G3DSA:3.30.300.90 1 89 2.0E-34 T 01-11-2018 D3790_11300 6d7cb98748bfaf15b9df11c88cadb6d9 107 PIRSF PIRSF003113 1 99 4.1E-33 T 01-11-2018 IPR002634 BolA protein D3790_11300 6d7cb98748bfaf15b9df11c88cadb6d9 107 Pfam PF01722 BolA-like protein 10 83 4.2E-29 T 01-11-2018 IPR002634 BolA protein D3790_11300 6d7cb98748bfaf15b9df11c88cadb6d9 107 SUPERFAMILY SSF82657 1 88 3.27E-29 T 01-11-2018 IPR036065 BolA-like superfamily D3790_19495 20ac2ec6d819f7f2cbbc2259aaaa029d 404 Gene3D G3DSA:1.20.1170.10 93 400 7.3E-8 T 01-11-2018 D3790_19495 20ac2ec6d819f7f2cbbc2259aaaa029d 404 SUPERFAMILY SSF58100 44 398 7.06E-66 T 01-11-2018 D3790_17225 a06acf3cb8eefbb61688dc00f4e06074 159 Gene3D G3DSA:3.40.50.10110 1 155 1.5E-48 T 01-11-2018 IPR036768 DNA polymerase III subunit chi superfamily D3790_17225 a06acf3cb8eefbb61688dc00f4e06074 159 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 152 8.1E-40 T 01-11-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 D3790_17225 a06acf3cb8eefbb61688dc00f4e06074 159 SUPERFAMILY SSF102400 1 153 1.57E-45 T 01-11-2018 IPR036768 DNA polymerase III subunit chi superfamily D3790_11360 6778290c8557c076dd7941aa228e814e 350 Gene3D G3DSA:3.40.50.1100 49 155 6.0E-69 T 01-11-2018 D3790_11360 6778290c8557c076dd7941aa228e814e 350 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 35 313 1.1E-41 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D3790_11360 6778290c8557c076dd7941aa228e814e 350 Gene3D G3DSA:3.40.50.1100 23 322 6.0E-69 T 01-11-2018 D3790_11360 6778290c8557c076dd7941aa228e814e 350 SUPERFAMILY SSF53686 18 334 4.98E-69 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D3790_13830 2341c091fdb50705865f3143596a3d0f 246 SUPERFAMILY SSF69618 1 245 5.62E-55 T 01-11-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D3790_13830 2341c091fdb50705865f3143596a3d0f 246 Gene3D G3DSA:3.40.50.10090 4 245 2.1E-65 T 01-11-2018 D3790_13830 2341c091fdb50705865f3143596a3d0f 246 Gene3D G3DSA:3.40.50.10090 32 165 2.1E-65 T 01-11-2018 D3790_13830 2341c091fdb50705865f3143596a3d0f 246 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 1.4E-37 T 01-11-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D3790_18520 b6011c2159e31e98dfdb8a133d464ab1 271 Pfam PF03180 NLPA lipoprotein 33 271 1.1E-97 T 01-11-2018 IPR004872 Lipoprotein NlpA family D3790_18520 b6011c2159e31e98dfdb8a133d464ab1 271 PIRSF PIRSF002854 1 271 3.1E-99 T 01-11-2018 IPR004872 Lipoprotein NlpA family D3790_18520 b6011c2159e31e98dfdb8a133d464ab1 271 Gene3D G3DSA:3.40.190.10 115 221 8.6E-98 T 01-11-2018 D3790_18520 b6011c2159e31e98dfdb8a133d464ab1 271 Gene3D G3DSA:3.40.190.10 34 265 8.6E-98 T 01-11-2018 D3790_18520 b6011c2159e31e98dfdb8a133d464ab1 271 SUPERFAMILY SSF53850 33 271 6.79E-82 T 01-11-2018 D3790_18520 b6011c2159e31e98dfdb8a133d464ab1 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 1.2E-135 T 01-11-2018 IPR004872 Lipoprotein NlpA family D3790_01960 4d97027be63241459a3fca9112e8f2a5 342 Pfam PF03741 Integral membrane protein TerC family 73 299 2.7E-43 T 01-11-2018 IPR005496 Integral membrane protein TerC GO:0016021 D3790_01960 4d97027be63241459a3fca9112e8f2a5 342 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 10 337 1.8E-106 T 01-11-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 D3790_06560 7d354846e0352bf68e74455ff2dfcb4a 340 Pfam PF01548 Transposase 6 149 3.8E-18 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D3790_06560 7d354846e0352bf68e74455ff2dfcb4a 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 296 6.2E-27 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D3790_00600 1c1c2c5bb4b36d961341fc14902c387d 204 Pfam PF13700 Domain of unknown function (DUF4158) 9 86 5.9E-16 T 01-11-2018 IPR025296 Domain of unknown function DUF4158 D3790_18745 a4b4a3ba57818870083f7ddb3c765d9a 136 Pfam PF10947 Protein of unknown function (DUF2628) 8 120 1.5E-26 T 01-11-2018 IPR024399 Protein of unknown function DUF2628 D3790_18745 a4b4a3ba57818870083f7ddb3c765d9a 136 ProDom PD031864 YIGF SIMILAR ESCHERICHIA COLI MEMBRANE XCC4223 XAC4357 XAC2195 7 127 1.0E-14 T 01-11-2018 D3790_06825 0346b5636793bb6089764f7f54d63459 145 Pfam PF13551 Winged helix-turn helix 18 78 4.4E-11 T 01-11-2018 D3790_06825 0346b5636793bb6089764f7f54d63459 145 SUPERFAMILY SSF46689 7 120 1.43E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_08060 0346b5636793bb6089764f7f54d63459 145 Pfam PF13551 Winged helix-turn helix 18 78 4.4E-11 T 01-11-2018 D3790_08060 0346b5636793bb6089764f7f54d63459 145 SUPERFAMILY SSF46689 7 120 1.43E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_16525 ade1dfef9d80a8efff8b8b72590c6571 301 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 199 210 - T 01-11-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 D3790_16525 ade1dfef9d80a8efff8b8b72590c6571 301 SUPERFAMILY SSF50630 187 285 2.57E-7 T 01-11-2018 IPR021109 Aspartic peptidase domain superfamily D3790_16525 ade1dfef9d80a8efff8b8b72590c6571 301 Pfam PF13650 Aspartyl protease 48 120 2.5E-6 T 01-11-2018 D3790_16525 ade1dfef9d80a8efff8b8b72590c6571 301 Gene3D G3DSA:2.40.70.10 186 300 1.3E-11 T 01-11-2018 IPR021109 Aspartic peptidase domain superfamily D3790_16525 ade1dfef9d80a8efff8b8b72590c6571 301 Gene3D G3DSA:2.40.70.10 25 161 4.0E-7 T 01-11-2018 IPR021109 Aspartic peptidase domain superfamily D3790_07785 3832aacbdfffa505cb0206566969e8db 442 PIRSF PIRSF006060 3 433 3.1E-58 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D3790_07785 3832aacbdfffa505cb0206566969e8db 442 Pfam PF13520 Amino acid permease 12 406 2.6E-50 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D3790_07785 3832aacbdfffa505cb0206566969e8db 442 Gene3D G3DSA:1.20.1740.10 5 435 3.7E-71 T 01-11-2018 D3790_09405 e04d2e9fbecfdfac0002428e92615848 85 Gene3D G3DSA:1.10.1200.10 2 85 1.7E-19 T 01-11-2018 IPR036736 ACP-like superfamily D3790_09405 e04d2e9fbecfdfac0002428e92615848 85 SUPERFAMILY SSF47336 8 84 9.55E-12 T 01-11-2018 IPR036736 ACP-like superfamily D3790_01650 8f189d8afd2839dca2ca0a3219c0b7f8 342 Pfam PF01548 Transposase 7 146 3.9E-17 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D3790_01650 8f189d8afd2839dca2ca0a3219c0b7f8 342 Pfam PF02371 Transposase IS116/IS110/IS902 family 214 292 2.9E-25 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D3790_18960 4e7f7ab9eff51d38124862052b8f34ed 210 SUPERFAMILY SSF55718 16 119 1.06E-7 T 01-11-2018 IPR036527 SCP2 sterol-binding domain superfamily D3790_18960 4e7f7ab9eff51d38124862052b8f34ed 210 Pfam PF02036 SCP-2 sterol transfer family 20 118 6.4E-18 T 01-11-2018 IPR003033 SCP2 sterol-binding domain D3790_18720 8359ebc6196bbd3081dfe1aa773a672f 288 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 01-11-2018 IPR030470 UbiA prenyltransferase conserved site D3790_18720 8359ebc6196bbd3081dfe1aa773a672f 288 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 10 287 1.2E-109 T 01-11-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 D3790_18720 8359ebc6196bbd3081dfe1aa773a672f 288 Gene3D G3DSA:1.10.357.140 22 184 3.5E-38 T 01-11-2018 D3790_18720 8359ebc6196bbd3081dfe1aa773a672f 288 Pfam PF01040 UbiA prenyltransferase family 28 271 3.2E-62 T 01-11-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 D3790_18720 8359ebc6196bbd3081dfe1aa773a672f 288 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 29.624 T 01-11-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 D3790_18190 4684be327120ecf07e5cf9e6eb119eff 169 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 30 1.6E-7 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site D3790_18190 4684be327120ecf07e5cf9e6eb119eff 169 SUPERFAMILY SSF54523 13 158 1.41E-10 T 01-11-2018 D3790_18190 4684be327120ecf07e5cf9e6eb119eff 169 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 9.1E-8 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site D3790_02795 b1baae8110c690a2341cbf4a0fafffed 56 Gene3D G3DSA:2.30.30.40 3 56 3.6E-6 T 01-11-2018 D3790_02795 b1baae8110c690a2341cbf4a0fafffed 56 Pfam PF07653 Variant SH3 domain 7 54 1.3E-7 T 01-11-2018 IPR001452 SH3 domain GO:0005515 D3790_02795 b1baae8110c690a2341cbf4a0fafffed 56 SUPERFAMILY SSF50044 3 54 5.38E-9 T 01-11-2018 IPR036028 SH3-like domain superfamily GO:0005515 D3790_19695 fb39abcb8861a62c644d70bca231106c 254 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 4 241 6.1E-48 T 01-11-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 D3790_19695 fb39abcb8861a62c644d70bca231106c 254 TIGRFAM TIGR01868 casD_Cas5e: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI 4 176 1.1E-45 T 01-11-2018 IPR010147 CRISPR-associated protein, CasD GO:0003723|GO:0051607 D3790_19695 fb39abcb8861a62c644d70bca231106c 254 Gene3D G3DSA:3.30.70.2660 1 250 1.6E-57 T 01-11-2018 D3790_19695 fb39abcb8861a62c644d70bca231106c 254 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 4 46 1.2E-11 T 01-11-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal D3790_06310 6ac5e0d674fea99a9cb41c12ee31f805 319 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 145 298 3.8E-10 T 01-11-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 D3790_06310 6ac5e0d674fea99a9cb41c12ee31f805 319 PIRSF PIRSF019543 1 319 4.3E-100 T 01-11-2018 IPR014503 Clavaminate synthase-like GO:0005506|GO:0016491|GO:0055114 D3790_06310 6ac5e0d674fea99a9cb41c12ee31f805 319 Gene3D G3DSA:3.60.130.10 11 314 2.7E-62 T 01-11-2018 D3790_06310 6ac5e0d674fea99a9cb41c12ee31f805 319 SUPERFAMILY SSF51197 34 308 1.05E-47 T 01-11-2018 D3790_19475 e49ce4b752f975281ee3a88e937c64da 102 Pfam PF01845 CcdB protein 2 101 1.8E-27 T 01-11-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 D3790_19475 e49ce4b752f975281ee3a88e937c64da 102 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 13 101 9.0E-25 T 01-11-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 D3790_19475 e49ce4b752f975281ee3a88e937c64da 102 Gene3D G3DSA:2.30.30.110 1 102 1.3E-33 T 01-11-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor D3790_19475 e49ce4b752f975281ee3a88e937c64da 102 SUPERFAMILY SSF50118 1 101 1.24E-26 T 01-11-2018 D3790_18690 4803d4429a2a46447223a10cddf677a6 276 SUPERFAMILY SSF55781 97 273 6.54E-48 T 01-11-2018 D3790_18690 4803d4429a2a46447223a10cddf677a6 276 Gene3D G3DSA:3.30.450.40 98 276 1.9E-62 T 01-11-2018 IPR029016 GAF-like domain superfamily D3790_18690 4803d4429a2a46447223a10cddf677a6 276 Pfam PF01614 Bacterial transcriptional regulator 147 270 2.7E-39 T 01-11-2018 IPR014757 Transcription regulator IclR, C-terminal D3790_18690 4803d4429a2a46447223a10cddf677a6 276 SMART SM00346 26 116 7.2E-27 T 01-11-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 D3790_18690 4803d4429a2a46447223a10cddf677a6 276 SUPERFAMILY SSF46785 26 99 4.09E-13 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily D3790_18690 4803d4429a2a46447223a10cddf677a6 276 Gene3D G3DSA:1.10.10.10 11 81 2.3E-17 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_18690 4803d4429a2a46447223a10cddf677a6 276 Pfam PF09339 IclR helix-turn-helix domain 28 78 1.8E-16 T 01-11-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 D3790_02750 a97f634c03191d8a6edad4ad135fff25 209 Gene3D G3DSA:3.40.30.10 1 79 2.7E-16 T 01-11-2018 D3790_02750 a97f634c03191d8a6edad4ad135fff25 209 Gene3D G3DSA:1.20.1050.10 81 190 1.5E-32 T 01-11-2018 D3790_02750 a97f634c03191d8a6edad4ad135fff25 209 Pfam PF13410 Glutathione S-transferase, C-terminal domain 121 200 1.9E-8 T 01-11-2018 D3790_02750 a97f634c03191d8a6edad4ad135fff25 209 SUPERFAMILY SSF52833 3 80 4.75E-17 T 01-11-2018 IPR036249 Thioredoxin-like superfamily D3790_02750 a97f634c03191d8a6edad4ad135fff25 209 SUPERFAMILY SSF47616 83 203 4.97E-17 T 01-11-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D3790_02750 a97f634c03191d8a6edad4ad135fff25 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 80 1.1E-11 T 01-11-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 D3790_13765 826e771fa9a00de7cccf29ef76ca0853 296 Pfam PF00892 EamA-like transporter family 8 142 1.0E-16 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D3790_13765 826e771fa9a00de7cccf29ef76ca0853 296 SUPERFAMILY SSF103481 204 285 2.75E-7 T 01-11-2018 D3790_13765 826e771fa9a00de7cccf29ef76ca0853 296 SUPERFAMILY SSF103481 43 144 8.89E-14 T 01-11-2018 D3790_13765 826e771fa9a00de7cccf29ef76ca0853 296 TIGRFAM TIGR00688 rarD: protein RarD 7 260 1.6E-88 T 01-11-2018 IPR004626 RarD protein GO:0005887 D3790_16345 a36ca22aa402d762d83b7277c7b469c1 449 Pfam PF10797 Protein of unknown function 20 448 4.4E-176 T 01-11-2018 IPR019733 Uncharacterised protein family YhfT D3790_02675 05456f2ddabff74cfb122a60790d9c86 390 Pfam PF17482 Phage tail sheath C-terminal domain 276 377 1.5E-14 T 01-11-2018 IPR020287 Tail sheath protein, C-terminal domain D3790_02675 05456f2ddabff74cfb122a60790d9c86 390 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 108 274 8.6E-35 T 01-11-2018 IPR035089 Tail sheath protein, subtilisin-like domain D3790_07120 22e7314634cfc0d1b6d42476e294bc9d 162 Gene3D G3DSA:3.40.630.30 2 160 8.4E-48 T 01-11-2018 D3790_07120 22e7314634cfc0d1b6d42476e294bc9d 162 Pfam PF00583 Acetyltransferase (GNAT) family 37 144 1.1E-8 T 01-11-2018 IPR000182 GNAT domain D3790_07120 22e7314634cfc0d1b6d42476e294bc9d 162 SUPERFAMILY SSF55729 25 146 2.13E-15 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_11950 85aae19c28bc648b32eeb521b25552e1 446 Pfam PF05525 Branched-chain amino acid transport protein 7 429 1.6E-153 T 01-11-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 D3790_11950 85aae19c28bc648b32eeb521b25552e1 446 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 416 1.2E-151 T 01-11-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 D3790_00250 f1719819ef96c4afd59622b1487fc438 199 Gene3D G3DSA:2.70.50.50 25 199 8.6E-74 T 01-11-2018 D3790_00250 f1719819ef96c4afd59622b1487fc438 199 SUPERFAMILY SSF81296 30 198 1.29E-61 T 01-11-2018 IPR014756 Immunoglobulin E-set D3790_00250 f1719819ef96c4afd59622b1487fc438 199 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 30 196 1.1E-39 T 01-11-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal D3790_04440 c14c6613eda6fc09627563f988dea658 307 SUPERFAMILY SSF64383 170 301 2.09E-46 T 01-11-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 D3790_04440 c14c6613eda6fc09627563f988dea658 307 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 301 24.678 T 01-11-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 D3790_04440 c14c6613eda6fc09627563f988dea658 307 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 4 299 1.2E-86 T 01-11-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 D3790_04440 c14c6613eda6fc09627563f988dea658 307 Gene3D G3DSA:3.30.1400.10 167 306 2.7E-54 T 01-11-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 D3790_04440 c14c6613eda6fc09627563f988dea658 307 SMART SM00771 169 299 2.7E-71 T 01-11-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 D3790_04440 c14c6613eda6fc09627563f988dea658 307 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 172 300 5.0E-58 T 01-11-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 D3790_04440 c14c6613eda6fc09627563f988dea658 307 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 172 297 2.5E-49 T 01-11-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 D3790_17550 cd02f72dd1873912444d507b20c2651e 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 6 258 1.7E-101 T 01-11-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria D3790_17550 cd02f72dd1873912444d507b20c2651e 260 Pfam PF02405 Permease MlaE 46 256 1.4E-75 T 01-11-2018 IPR030802 ABC transporter permease MalE GO:0043190 D3790_01470 18f0941760fda3090e9b9dcef131485f 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 6.8E-31 T 01-11-2018 IPR000390 Small multidrug resistance protein family GO:0016021 D3790_01470 18f0941760fda3090e9b9dcef131485f 104 Gene3D G3DSA:1.10.3730.20 1 104 3.2E-32 T 01-11-2018 D3790_01470 18f0941760fda3090e9b9dcef131485f 104 SUPERFAMILY SSF103481 5 103 7.72E-20 T 01-11-2018 D3790_00910 1a88a2c1e310733374f5237b832273ce 178 Gene3D G3DSA:3.30.420.470 8 169 1.1E-11 T 01-11-2018 D3790_00910 1a88a2c1e310733374f5237b832273ce 178 Pfam PF13358 DDE superfamily endonuclease 15 149 4.2E-32 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_01670 12f4ae660dfda2917f4df43e9d77008f 154 Pfam PF12101 Protein of unknown function (DUF3577) 9 137 2.9E-57 T 01-11-2018 IPR021960 Protein of unknown function DUF3577 D3790_01520 d09815fdc59fe9bea9c42bfb2dccd27c 136 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 33 128 1.0E-34 T 01-11-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_01520 d09815fdc59fe9bea9c42bfb2dccd27c 136 SUPERFAMILY SSF102220 27 134 3.01E-30 T 01-11-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_01520 d09815fdc59fe9bea9c42bfb2dccd27c 136 Gene3D G3DSA:3.40.50.10220 32 135 1.4E-31 T 01-11-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_01520 d09815fdc59fe9bea9c42bfb2dccd27c 136 Pfam PF03603 DNA polymerase III psi subunit 1 126 3.4E-40 T 01-11-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_01520 d09815fdc59fe9bea9c42bfb2dccd27c 136 PIRSF PIRSF029225 1 130 7.6E-37 T 01-11-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D3790_07730 0ad9386521a3b0f31b0e168aec6e604e 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 213 2.5E-44 T 01-11-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 D3790_07730 0ad9386521a3b0f31b0e168aec6e604e 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 1.4E-96 T 01-11-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 D3790_02705 9ba2e8fc67f04e80628360b368768859 507 Pfam PF05954 Phage late control gene D protein (GPD) 395 494 3.7E-9 T 01-11-2018 D3790_02705 9ba2e8fc67f04e80628360b368768859 507 Pfam PF05954 Phage late control gene D protein (GPD) 77 273 8.9E-20 T 01-11-2018 D3790_02705 9ba2e8fc67f04e80628360b368768859 507 SUPERFAMILY SSF69279 27 199 5.67E-24 T 01-11-2018 D3790_16540 82a955017ccab6b76614bcc7db9233c4 109 Pfam PF07119 Protein of unknown function (DUF1375) 18 79 1.4E-13 T 01-11-2018 IPR010780 Protein of unknown function DUF1375 D3790_17735 f055f7245794a8f4db344bd2c0f6723e 222 Pfam PF09335 SNARE associated Golgi protein 48 173 3.6E-21 T 01-11-2018 IPR032816 SNARE associated Golgi protein D3790_01685 2884a81bef981a6bc61b5f5a31998aa1 241 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 17 232 3.3E-76 T 01-11-2018 IPR014996 Integrating conjugative element protein, PFL4669 D3790_01685 2884a81bef981a6bc61b5f5a31998aa1 241 Pfam PF08900 Domain of unknown function (DUF1845) 15 232 1.9E-85 T 01-11-2018 IPR014996 Integrating conjugative element protein, PFL4669 D3790_01405 633720fce68e501a5ccf6cec584dbb70 297 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 32 241 3.9E-63 T 01-11-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class D3790_01405 633720fce68e501a5ccf6cec584dbb70 297 Pfam PF07514 Putative helicase 32 241 2.0E-29 T 01-11-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative D3790_01405 633720fce68e501a5ccf6cec584dbb70 297 Gene3D G3DSA:1.10.3210.40 36 253 2.9E-9 T 01-11-2018 D3790_17435 defcaa8feb6904f441a3a729e799683a 135 Gene3D G3DSA:3.30.160.250 1 85 6.5E-20 T 01-11-2018 D3790_17435 defcaa8feb6904f441a3a729e799683a 135 SUPERFAMILY SSF143100 1 65 1.44E-15 T 01-11-2018 IPR035069 TTHA1013/TTHA0281-like D3790_17435 defcaa8feb6904f441a3a729e799683a 135 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 128 3.9E-30 T 01-11-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system D3790_13440 0c3572b6ce68a8fdb7bace1ca48da8a5 115 Gene3D G3DSA:1.10.10.10 2 74 3.4E-22 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D3790_13440 0c3572b6ce68a8fdb7bace1ca48da8a5 115 SUPERFAMILY SSF46955 3 73 3.85E-20 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily D3790_13440 0c3572b6ce68a8fdb7bace1ca48da8a5 115 Pfam PF02316 Mu DNA-binding domain 9 112 3.8E-11 T 01-11-2018 IPR003314 Mu-type HTH domain GO:0003677 D3790_16130 36aba2163343561ce2b6742ac3980f34 189 SUPERFAMILY SSF50985 123 174 2.62E-7 T 01-11-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II D3790_14465 d61d2cd3a4fbfe469c59c443bb4adcc5 53 SUPERFAMILY SSF54786 15 53 1.45E-5 T 01-11-2018 D3790_00655 b9ed5ca22aa8db528014c8253c06c9ac 295 Gene3D G3DSA:3.40.50.300 1 282 1.4E-33 T 01-11-2018 D3790_00655 b9ed5ca22aa8db528014c8253c06c9ac 295 SUPERFAMILY SSF52540 1 275 1.4E-31 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_00655 b9ed5ca22aa8db528014c8253c06c9ac 295 Pfam PF13614 AAA domain 4 146 4.0E-16 T 01-11-2018 IPR025669 AAA domain D3790_04700 5d2b3c80d2dd6a9dbd8fd0aa6d4308a9 416 Pfam PF07804 HipA-like C-terminal domain 162 362 8.5E-40 T 01-11-2018 IPR012893 HipA-like, C-terminal D3790_04700 5d2b3c80d2dd6a9dbd8fd0aa6d4308a9 416 Pfam PF13657 HipA N-terminal domain 18 118 2.2E-13 T 01-11-2018 IPR017508 HipA, N-terminal subdomain 1 D3790_09500 4ed495154bb3cf48238fdb66d738d7a3 138 PIRSF PIRSF002889 1 137 1.1E-39 T 01-11-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 D3790_09500 4ed495154bb3cf48238fdb66d738d7a3 138 Pfam PF00460 Flagella basal body rod protein 10 39 9.3E-10 T 01-11-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 D3790_09500 4ed495154bb3cf48238fdb66d738d7a3 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 01-11-2018 IPR019776 Flagellar basal body rod protein, conserved site D3790_09500 4ed495154bb3cf48238fdb66d738d7a3 138 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 1.7E-40 T 01-11-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 D3790_17545 37e2289737d99f251cd290ad9a4106c7 267 Pfam PF00005 ABC transporter 26 172 2.3E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_17545 37e2289737d99f251cd290ad9a4106c7 267 SUPERFAMILY SSF52540 8 239 4.08E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_17545 37e2289737d99f251cd290ad9a4106c7 267 Gene3D G3DSA:3.40.50.300 7 250 3.6E-62 T 01-11-2018 D3790_17545 37e2289737d99f251cd290ad9a4106c7 267 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_17545 37e2289737d99f251cd290ad9a4106c7 267 SMART SM00382 33 228 2.7E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_15035 990e1977766285745907c0443d69ebda 339 SUPERFAMILY SSF56059 97 254 1.25E-10 T 01-11-2018 D3790_07230 43fb59ae56c5a4af874a9e1ae4e746a5 361 Gene3D G3DSA:1.10.530.10 99 349 8.9E-88 T 01-11-2018 D3790_07230 43fb59ae56c5a4af874a9e1ae4e746a5 361 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 56 353 6.6E-108 T 01-11-2018 IPR011970 Lytic murein transglycosylase D3790_07230 43fb59ae56c5a4af874a9e1ae4e746a5 361 Gene3D G3DSA:1.10.8.350 66 233 8.9E-88 T 01-11-2018 D3790_07230 43fb59ae56c5a4af874a9e1ae4e746a5 361 SUPERFAMILY SSF53955 46 354 1.69E-92 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily D3790_07230 43fb59ae56c5a4af874a9e1ae4e746a5 361 Pfam PF13406 Transglycosylase SLT domain 57 350 2.1E-102 T 01-11-2018 IPR031304 Transglycosylase SLT domain 2 D3790_07190 1cd695ac748161f605f83068ef3e6ca0 103 Pfam PF11080 Endoribonuclease GhoS 2 87 3.8E-6 T 01-11-2018 IPR022597 Endoribonuclease antitoxin GhoS GO:0004521 D3790_10795 f2fb3e9f329271e014291e5003f2ecc6 123 PIRSF PIRSF006287 1 120 4.6E-47 T 01-11-2018 IPR008249 Uncharacterised protein family UPF0231 D3790_10795 f2fb3e9f329271e014291e5003f2ecc6 123 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 1.0E-48 T 01-11-2018 IPR008249 Uncharacterised protein family UPF0231 D3790_10795 f2fb3e9f329271e014291e5003f2ecc6 123 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 28.698 T 01-11-2018 IPR008249 Uncharacterised protein family UPF0231 D3790_10795 f2fb3e9f329271e014291e5003f2ecc6 123 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 3.6E-43 T 01-11-2018 IPR008249 Uncharacterised protein family UPF0231 D3790_18110 43545569241f7ab7ce67ec4b0de63747 783 Gene3D G3DSA:2.60.450.10 43 142 1.2E-7 T 01-11-2018 D3790_18110 43545569241f7ab7ce67ec4b0de63747 783 Pfam PF04453 Organic solvent tolerance protein 309 698 6.5E-102 T 01-11-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 D3790_18110 43545569241f7ab7ce67ec4b0de63747 783 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 762 20.503 T 01-11-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 D3790_18110 43545569241f7ab7ce67ec4b0de63747 783 Pfam PF03968 OstA-like protein 52 190 9.5E-23 T 01-11-2018 IPR005653 Organic solvent tolerance-like, N-terminal D3790_18525 770af3b70879aed6e6ae83f7b66952e8 217 Gene3D G3DSA:1.10.3720.10 1 217 1.5E-57 T 01-11-2018 IPR035906 MetI-like superfamily D3790_18525 770af3b70879aed6e6ae83f7b66952e8 217 SUPERFAMILY SSF161098 9 201 7.98E-46 T 01-11-2018 IPR035906 MetI-like superfamily D3790_18525 770af3b70879aed6e6ae83f7b66952e8 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 211 1.1E-19 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_03505 612bba0f22896605a47509941edb0a29 93 Pfam PF07362 Post-segregation antitoxin CcdA 23 87 1.1E-18 T 01-11-2018 IPR009956 Post-segregation antitoxin CcdA D3790_11400 ea522d4c6e9e2adcd23905667020a566 67 SUPERFAMILY SSF68989 1 67 2.75E-31 T 01-11-2018 IPR036666 HHA superfamily D3790_11400 ea522d4c6e9e2adcd23905667020a566 67 Gene3D G3DSA:1.20.1280.40 1 67 6.6E-37 T 01-11-2018 IPR036666 HHA superfamily D3790_11400 ea522d4c6e9e2adcd23905667020a566 67 Pfam PF05321 Haemolysin expression modulating protein 8 64 5.0E-33 T 01-11-2018 IPR007985 Haemolysin expression modulating, HHA D3790_06715 f239c110097da5bd434446231079c055 251 Pfam PF00106 short chain dehydrogenase 2 187 3.7E-56 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_06715 f239c110097da5bd434446231079c055 251 SUPERFAMILY SSF51735 3 229 5.75E-63 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_06715 f239c110097da5bd434446231079c055 251 Gene3D G3DSA:3.40.50.720 2 235 1.5E-68 T 01-11-2018 D3790_06715 f239c110097da5bd434446231079c055 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D3790_06715 f239c110097da5bd434446231079c055 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 5.2E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_06715 f239c110097da5bd434446231079c055 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 5.2E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_06715 f239c110097da5bd434446231079c055 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 5.2E-9 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_06715 f239c110097da5bd434446231079c055 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.2E-20 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_06715 f239c110097da5bd434446231079c055 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.2E-20 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_06715 f239c110097da5bd434446231079c055 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.2E-20 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_06715 f239c110097da5bd434446231079c055 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.2E-20 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_06715 f239c110097da5bd434446231079c055 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.2E-20 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_01185 1ef746d1ee396349a17c576ffc257588 239 SUPERFAMILY SSF53335 18 237 1.79E-39 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_01185 1ef746d1ee396349a17c576ffc257588 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 238 3.7E-71 T 01-11-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 D3790_01185 1ef746d1ee396349a17c576ffc257588 239 Pfam PF02390 Putative methyltransferase 64 233 4.3E-61 T 01-11-2018 D3790_01185 1ef746d1ee396349a17c576ffc257588 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 30.905 T 01-11-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 D3790_01185 1ef746d1ee396349a17c576ffc257588 239 Gene3D G3DSA:3.40.50.150 30 239 9.4E-72 T 01-11-2018 D3790_06895 004d2f9b59af58bbb2a81b0efbb23f45 67 Gene3D G3DSA:3.30.300.30 19 66 1.5E-15 T 01-11-2018 D3790_06895 004d2f9b59af58bbb2a81b0efbb23f45 67 SUPERFAMILY SSF56801 12 58 1.01E-15 T 01-11-2018 D3790_02070 31c0c8dbac60579adc060740e980b030 305 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 303 1.2E-55 T 01-11-2018 IPR010106 Recombination-promoting nuclease RpnA D3790_02070 31c0c8dbac60579adc060740e980b030 305 Pfam PF04754 Putative transposase, YhgA-like 9 209 2.3E-71 T 01-11-2018 IPR006842 Transposase (putative), YhgA-like D3790_16365 5dfd32f02086cdb340a3d62aa70a3d61 120 SUPERFAMILY SSF63520 15 113 2.62E-9 T 01-11-2018 IPR036634 PRD domain superfamily GO:0006355 D3790_07570 78111bfe848df8760972d6660e426c1f 160 SUPERFAMILY SSF75169 38 143 5.72E-10 T 01-11-2018 IPR027396 DsrEFH-like D3790_07570 78111bfe848df8760972d6660e426c1f 160 Gene3D G3DSA:3.40.1260.10 49 149 2.7E-7 T 01-11-2018 IPR027396 DsrEFH-like D3790_07570 78111bfe848df8760972d6660e426c1f 160 TIGRFAM TIGR04044 MSMEG_0572_fam: MSMEG_0572 family protein 2 160 3.0E-84 T 01-11-2018 IPR023847 Conserved hypothetical protein CHP04044, MSMEG0572 D3790_06385 154cf33cc6952b29abb1179b1ec0cd29 252 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 242 20.418 T 01-11-2018 IPR009627 Uncharacterised protein family UPF0259 D3790_06385 154cf33cc6952b29abb1179b1ec0cd29 252 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 240 4.7E-66 T 01-11-2018 IPR009627 Uncharacterised protein family UPF0259 D3790_15435 893df3b6944c4354016aec4dba0d3323 125 Pfam PF03899 ATP synthase I chain 13 109 1.7E-13 T 01-11-2018 IPR005598 ATP synthase protein I D3790_18425 3291a639a0938e2c28767308965de76b 251 SUPERFAMILY SSF64005 10 236 3.53E-87 T 01-11-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 D3790_18425 3291a639a0938e2c28767308965de76b 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 20 240 5.4E-78 T 01-11-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 D3790_18425 3291a639a0938e2c28767308965de76b 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 13 240 9.2E-98 T 01-11-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 D3790_18425 3291a639a0938e2c28767308965de76b 251 Gene3D G3DSA:3.40.1180.10 5 242 2.4E-91 T 01-11-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 D3790_18425 3291a639a0938e2c28767308965de76b 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 13 241 39.601 T 01-11-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 D3790_18425 3291a639a0938e2c28767308965de76b 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 186 203 - T 01-11-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 D3790_10780 c7c4fc9a680a4e8e8db88f4b91b09b30 244 Gene3D G3DSA:3.30.70.2970 45 153 1.4E-55 T 01-11-2018 D3790_10780 c7c4fc9a680a4e8e8db88f4b91b09b30 244 Gene3D G3DSA:3.30.110.170 35 241 1.4E-55 T 01-11-2018 D3790_10780 c7c4fc9a680a4e8e8db88f4b91b09b30 244 Pfam PF04402 Protein of unknown function (DUF541) 33 240 9.0E-50 T 01-11-2018 IPR007497 Protein of unknown function DUF541 D3790_05120 e21483cfb4977b20d2af59d80a4ef169 174 Pfam PF02620 Uncharacterized ACR, COG1399 61 171 1.8E-17 T 01-11-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD D3790_04740 0defd48ae88f6dfa2967d8681fc02237 664 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 19 502 5.5E-192 T 01-11-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 D3790_04740 0defd48ae88f6dfa2967d8681fc02237 664 ProSitePatterns PS01303 BCCT family of transporters signature. 321 330 - T 01-11-2018 IPR018093 BCCT transporter, conserved site D3790_04740 0defd48ae88f6dfa2967d8681fc02237 664 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 57 503 6.1E-160 T 01-11-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 D3790_16825 4cef12f4904aa3ddeb6e3e0b3ab3fa83 199 Pfam PF00583 Acetyltransferase (GNAT) family 97 176 4.5E-11 T 01-11-2018 IPR000182 GNAT domain D3790_16825 4cef12f4904aa3ddeb6e3e0b3ab3fa83 199 Gene3D G3DSA:3.40.630.30 10 198 6.7E-37 T 01-11-2018 D3790_16825 4cef12f4904aa3ddeb6e3e0b3ab3fa83 199 SUPERFAMILY SSF55729 31 196 1.21E-17 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_18915 a3e76eb0834722c9d7c718580ca77104 299 SUPERFAMILY SSF103481 198 277 3.79E-7 T 01-11-2018 D3790_18915 a3e76eb0834722c9d7c718580ca77104 299 SUPERFAMILY SSF103481 35 131 7.85E-7 T 01-11-2018 D3790_18915 a3e76eb0834722c9d7c718580ca77104 299 Pfam PF00892 EamA-like transporter family 3 129 3.4E-7 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D3790_18915 a3e76eb0834722c9d7c718580ca77104 299 Pfam PF00892 EamA-like transporter family 139 274 1.2E-8 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D3790_18915 a3e76eb0834722c9d7c718580ca77104 299 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 272 1.4E-76 T 01-11-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 D3790_19185 5feee83d6696161ce24c5736116ac50e 67 Pfam PF04328 Selenoprotein, putative 5 67 2.7E-29 T 01-11-2018 IPR007423 Selenoprotein, putative D3790_15525 d9b5be62788fea573c81e5b6f7e5bd73 57 Pfam PF01197 Ribosomal protein L31 12 44 8.6E-9 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D3790_15525 d9b5be62788fea573c81e5b6f7e5bd73 57 Gene3D G3DSA:2.30.170.50 12 54 5.1E-6 T 01-11-2018 D3790_15525 d9b5be62788fea573c81e5b6f7e5bd73 57 SUPERFAMILY SSF143800 12 55 4.71E-6 T 01-11-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D3790_18325 e8d54b83aeec3ff72de1ac737fc172c9 281 TIGRFAM TIGR03138 QueF: queuine synthase 10 281 3.1E-126 T 01-11-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 D3790_18325 e8d54b83aeec3ff72de1ac737fc172c9 281 PIRSF PIRSF004750 6 281 1.4E-126 T 01-11-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 D3790_18325 e8d54b83aeec3ff72de1ac737fc172c9 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 162.034 T 01-11-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 D3790_18325 e8d54b83aeec3ff72de1ac737fc172c9 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 130 1.5E-48 T 01-11-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 D3790_18325 e8d54b83aeec3ff72de1ac737fc172c9 281 Gene3D G3DSA:3.30.1130.10 21 139 7.5E-44 T 01-11-2018 D3790_18325 e8d54b83aeec3ff72de1ac737fc172c9 281 Pfam PF14489 QueF-like protein 195 269 4.0E-27 T 01-11-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 D3790_18325 e8d54b83aeec3ff72de1ac737fc172c9 281 Gene3D G3DSA:3.30.1130.10 144 281 6.6E-61 T 01-11-2018 D3790_18325 e8d54b83aeec3ff72de1ac737fc172c9 281 SUPERFAMILY SSF55620 185 265 6.15E-10 T 01-11-2018 D3790_00480 891fe231263c0fd15d91aed43c733cce 396 Pfam PF07690 Major Facilitator Superfamily 13 350 5.6E-44 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_00480 891fe231263c0fd15d91aed43c733cce 396 SUPERFAMILY SSF103473 4 394 7.46E-56 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_00480 891fe231263c0fd15d91aed43c733cce 396 Gene3D G3DSA:1.20.1720.10 7 383 2.6E-77 T 01-11-2018 D3790_00480 891fe231263c0fd15d91aed43c733cce 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 381 6.1E-61 T 01-11-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 D3790_15110 ddd05c402c9880240c01c893d0472111 102 PIRSF PIRSF039032 1 102 1.2E-37 T 01-11-2018 IPR009387 Toxin HigB-2 D3790_15110 ddd05c402c9880240c01c893d0472111 102 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 1 101 3.0E-9 T 01-11-2018 IPR009387 Toxin HigB-2 D3790_10500 cc8e681efbc7b613d3b15bcae5aa5fd3 263 Gene3D G3DSA:3.40.50.1400 114 236 9.7E-95 T 01-11-2018 D3790_10500 cc8e681efbc7b613d3b15bcae5aa5fd3 263 Gene3D G3DSA:3.40.50.1400 3 255 9.7E-95 T 01-11-2018 D3790_10500 cc8e681efbc7b613d3b15bcae5aa5fd3 263 SUPERFAMILY SSF53800 2 256 1.31E-78 T 01-11-2018 D3790_10500 cc8e681efbc7b613d3b15bcae5aa5fd3 263 Pfam PF06180 Cobalt chelatase (CbiK) 3 255 1.1E-98 T 01-11-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 D3790_10500 cc8e681efbc7b613d3b15bcae5aa5fd3 263 PIRSF PIRSF033579 1 262 6.9E-102 T 01-11-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 D3790_06840 e28fdbec3ee2f59b5af4fdfa81cc1e6b 197 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 134 175 3.0E-8 T 01-11-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D3790_06840 e28fdbec3ee2f59b5af4fdfa81cc1e6b 197 SUPERFAMILY SSF101967 20 159 3.01E-22 T 01-11-2018 D3790_06840 e28fdbec3ee2f59b5af4fdfa81cc1e6b 197 Gene3D G3DSA:2.150.10.10 2 165 5.0E-29 T 01-11-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D3790_06840 e28fdbec3ee2f59b5af4fdfa81cc1e6b 197 Pfam PF05658 Head domain of trimeric autotransporter adhesin 90 116 8.6E-5 T 01-11-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 D3790_11345 94532f57dbec93823e9c93948e23d7a0 130 SUPERFAMILY SSF47781 63 129 7.45E-24 T 01-11-2018 IPR010994 RuvA domain 2-like D3790_11345 94532f57dbec93823e9c93948e23d7a0 130 Pfam PF12836 Helix-hairpin-helix motif 65 129 3.1E-20 T 01-11-2018 D3790_11345 94532f57dbec93823e9c93948e23d7a0 130 Gene3D G3DSA:1.10.150.280 59 129 1.0E-20 T 01-11-2018 D3790_11345 94532f57dbec93823e9c93948e23d7a0 130 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 67 129 1.6E-27 T 01-11-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain D3790_11345 94532f57dbec93823e9c93948e23d7a0 130 SMART SM00278 78 97 0.2 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D3790_11345 94532f57dbec93823e9c93948e23d7a0 130 SMART SM00278 108 127 76.0 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D3790_07200 808583bfc69bb37b53d7d99bf207c8ce 394 SUPERFAMILY SSF53271 167 261 2.36E-8 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like D3790_07200 808583bfc69bb37b53d7d99bf207c8ce 394 Gene3D G3DSA:3.40.50.2020 170 307 3.6E-7 T 01-11-2018 D3790_04425 b9aae5bd1d80067d8082911e6d09b8a6 73 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 2 68 2.2E-30 T 01-11-2018 IPR024530 Putative quorum-sensing-regulated virulence factor D3790_04425 b9aae5bd1d80067d8082911e6d09b8a6 73 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 72 3.0E-28 T 01-11-2018 IPR024530 Putative quorum-sensing-regulated virulence factor D3790_09635 23522a0bdb1ed406a8985c8d796e126a 234 Gene3D G3DSA:3.40.640.10 28 184 1.7E-8 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D3790_09635 23522a0bdb1ed406a8985c8d796e126a 234 SUPERFAMILY SSF53383 34 153 2.75E-5 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase D3790_11575 524249c7866612ca36ae0fbe6e0cfa87 434 SUPERFAMILY SSF103473 16 424 4.71E-48 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_11575 524249c7866612ca36ae0fbe6e0cfa87 434 Gene3D G3DSA:1.20.1250.20 15 213 6.6E-19 T 01-11-2018 D3790_11575 524249c7866612ca36ae0fbe6e0cfa87 434 Gene3D G3DSA:1.20.1250.20 234 426 2.6E-19 T 01-11-2018 D3790_11575 524249c7866612ca36ae0fbe6e0cfa87 434 Pfam PF07690 Major Facilitator Superfamily 32 376 1.7E-21 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_09040 44bffd9d467dde96100d97a9048cd7f9 435 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 115 192 2.2E-18 T 01-11-2018 IPR006528 Phage head morphogenesis domain D3790_09040 44bffd9d467dde96100d97a9048cd7f9 435 Pfam PF04233 Phage Mu protein F like protein 63 192 2.2E-32 T 01-11-2018 IPR006528 Phage head morphogenesis domain D3790_13655 ffbce0df67ebbfbc0c423a637a8a67ad 501 PRINTS PR01035 Tetracycline resistance protein signature 25 41 1.3E-7 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 D3790_13655 ffbce0df67ebbfbc0c423a637a8a67ad 501 PRINTS PR01035 Tetracycline resistance protein signature 137 159 1.3E-7 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 D3790_13655 ffbce0df67ebbfbc0c423a637a8a67ad 501 PRINTS PR01035 Tetracycline resistance protein signature 312 332 1.3E-7 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 D3790_13655 ffbce0df67ebbfbc0c423a637a8a67ad 501 SUPERFAMILY SSF103473 6 493 1.44E-54 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_13655 ffbce0df67ebbfbc0c423a637a8a67ad 501 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 D3790_13655 ffbce0df67ebbfbc0c423a637a8a67ad 501 Gene3D G3DSA:1.20.1720.10 12 254 2.0E-38 T 01-11-2018 D3790_13655 ffbce0df67ebbfbc0c423a637a8a67ad 501 Pfam PF07690 Major Facilitator Superfamily 17 404 5.4E-46 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_01945 0abdaeec60eba9f34785edcb55b09eda 195 Pfam PF02342 TerD domain 2 179 4.3E-48 T 01-11-2018 IPR003325 TerD domain D3790_01945 0abdaeec60eba9f34785edcb55b09eda 195 Gene3D G3DSA:2.60.60.30 18 181 1.7E-49 T 01-11-2018 D3790_17380 5c04c0e318cc4adec95bed0d8217934f 371 Pfam PF13166 AAA domain 118 344 6.7E-12 T 01-11-2018 IPR026866 Protein CR006, P-loop domain D3790_17380 5c04c0e318cc4adec95bed0d8217934f 371 Gene3D G3DSA:3.40.50.300 51 232 1.7E-5 T 01-11-2018 D3790_09970 e4eb3021a9671ec2ddfc53d2e92ab5ea 580 Pfam PF00664 ABC transporter transmembrane region 63 286 1.7E-10 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D3790_09970 e4eb3021a9671ec2ddfc53d2e92ab5ea 580 Gene3D G3DSA:3.40.50.300 331 576 2.5E-78 T 01-11-2018 D3790_09970 e4eb3021a9671ec2ddfc53d2e92ab5ea 580 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 8 534 9.1E-157 T 01-11-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 D3790_09970 e4eb3021a9671ec2ddfc53d2e92ab5ea 580 Pfam PF00005 ABC transporter 356 503 2.2E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D3790_09970 e4eb3021a9671ec2ddfc53d2e92ab5ea 580 SUPERFAMILY SSF52540 335 574 5.12E-75 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_09970 e4eb3021a9671ec2ddfc53d2e92ab5ea 580 Gene3D G3DSA:1.20.1560.10 4 321 3.5E-26 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_09970 e4eb3021a9671ec2ddfc53d2e92ab5ea 580 SUPERFAMILY SSF90123 7 323 2.09E-39 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D3790_09970 e4eb3021a9671ec2ddfc53d2e92ab5ea 580 SMART SM00382 365 550 7.5E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain D3790_09970 e4eb3021a9671ec2ddfc53d2e92ab5ea 580 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D3790_05415 c59f80c2a6a3a09c1b2270e59795f7a7 689 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.18 T 01-11-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 D3790_05415 c59f80c2a6a3a09c1b2270e59795f7a7 689 SUPERFAMILY SSF140356 4 105 2.49E-33 T 01-11-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 D3790_05415 c59f80c2a6a3a09c1b2270e59795f7a7 689 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 2.1E-252 T 01-11-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 D3790_05415 c59f80c2a6a3a09c1b2270e59795f7a7 689 PIRSF PIRSF015589 1 688 5.2E-240 T 01-11-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 D3790_05415 c59f80c2a6a3a09c1b2270e59795f7a7 689 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 3.8E-142 T 01-11-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 D3790_05415 c59f80c2a6a3a09c1b2270e59795f7a7 689 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 1.9E-31 T 01-11-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 D3790_05415 c59f80c2a6a3a09c1b2270e59795f7a7 689 Gene3D G3DSA:3.30.870.10 317 499 1.2E-73 T 01-11-2018 D3790_05415 c59f80c2a6a3a09c1b2270e59795f7a7 689 Gene3D G3DSA:3.30.870.10 500 686 3.1E-71 T 01-11-2018 D3790_05415 c59f80c2a6a3a09c1b2270e59795f7a7 689 Gene3D G3DSA:1.20.58.310 9 109 2.1E-37 T 01-11-2018 D3790_05415 c59f80c2a6a3a09c1b2270e59795f7a7 689 Pfam PF02503 Polyphosphate kinase middle domain 119 321 4.7E-43 T 01-11-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 D3790_05415 c59f80c2a6a3a09c1b2270e59795f7a7 689 SUPERFAMILY SSF56024 315 497 6.91E-56 T 01-11-2018 D3790_05415 c59f80c2a6a3a09c1b2270e59795f7a7 689 Gene3D G3DSA:3.30.1840.10 110 307 7.8E-73 T 01-11-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 D3790_05415 c59f80c2a6a3a09c1b2270e59795f7a7 689 SUPERFAMILY SSF143724 107 313 3.34E-60 T 01-11-2018 D3790_05415 c59f80c2a6a3a09c1b2270e59795f7a7 689 SUPERFAMILY SSF56024 500 683 1.21E-66 T 01-11-2018 D3790_17860 e291c3a06d90c59e16ad634897d33f16 239 Pfam PF10554 Ash protein family 72 201 4.2E-6 T 01-11-2018 IPR018880 Bacteriophage P4, Ash protein D3790_16415 7c3ad22f8b8e7721fca89158ae233f61 227 SUPERFAMILY SSF53271 49 225 9.44E-31 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like D3790_16415 7c3ad22f8b8e7721fca89158ae233f61 227 Gene3D G3DSA:3.40.50.2020 70 227 1.4E-13 T 01-11-2018 D3790_18180 5aeaef7e30aa30c69b3c869a32fa900f 213 PIRSF PIRSF006324 1 210 3.1E-46 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 D3790_18180 5aeaef7e30aa30c69b3c869a32fa900f 213 Pfam PF01810 LysE type translocator 18 207 9.1E-30 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 D3790_06455 93806b4814ea63e28138072b01064c15 254 SUPERFAMILY SSF51735 10 242 1.16E-60 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_06455 93806b4814ea63e28138072b01064c15 254 Gene3D G3DSA:3.40.50.720 1 252 8.4E-71 T 01-11-2018 D3790_06455 93806b4814ea63e28138072b01064c15 254 Pfam PF00106 short chain dehydrogenase 14 211 3.9E-51 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_06455 93806b4814ea63e28138072b01064c15 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 2.7E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_06455 93806b4814ea63e28138072b01064c15 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 2.7E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_06455 93806b4814ea63e28138072b01064c15 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 2.7E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_06455 93806b4814ea63e28138072b01064c15 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 2.7E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_06455 93806b4814ea63e28138072b01064c15 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.7E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_06455 93806b4814ea63e28138072b01064c15 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 2.7E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D3790_14275 42715250bd2d8b7583559c3bbd2f7e5b 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 7.3E-15 T 01-11-2018 IPR007419 BFD-like [2Fe-2S]-binding domain D3790_14275 42715250bd2d8b7583559c3bbd2f7e5b 64 Gene3D G3DSA:1.10.10.1100 1 57 2.2E-20 T 01-11-2018 D3790_05090 5aea0d5147cb7a0ee58bc57ab31fd6dc 208 Gene3D G3DSA:3.40.50.720 1 203 4.8E-36 T 01-11-2018 D3790_05090 5aea0d5147cb7a0ee58bc57ab31fd6dc 208 SUPERFAMILY SSF51735 2 202 1.99E-29 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_05090 5aea0d5147cb7a0ee58bc57ab31fd6dc 208 Pfam PF13460 NAD(P)H-binding 8 188 2.9E-39 T 01-11-2018 IPR016040 NAD(P)-binding domain D3790_14570 f28e026b5bcfc7c1be6076c0425a35b9 395 SUPERFAMILY SSF103473 6 386 4.84E-54 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_14570 f28e026b5bcfc7c1be6076c0425a35b9 395 Pfam PF07690 Major Facilitator Superfamily 16 350 3.5E-35 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_14570 f28e026b5bcfc7c1be6076c0425a35b9 395 Gene3D G3DSA:1.20.1720.10 9 383 7.8E-112 T 01-11-2018 D3790_04145 eba59b9770f03d30d1780d49c8968747 170 Pfam PF00293 NUDIX domain 36 150 4.7E-14 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D3790_04145 eba59b9770f03d30d1780d49c8968747 170 SUPERFAMILY SSF55811 10 165 2.17E-32 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D3790_04145 eba59b9770f03d30d1780d49c8968747 170 Gene3D G3DSA:3.90.79.10 1 169 7.8E-53 T 01-11-2018 D3790_04145 eba59b9770f03d30d1780d49c8968747 170 PIRSF PIRSF017340 1 170 2.2E-63 T 01-11-2018 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 D3790_10345 55235cc8501b903d0ea60011e12f95ec 665 Pfam PF12571 Phage tail-collar fibre protein 1 149 2.0E-63 T 01-11-2018 IPR022225 Phage tail fibre protein D3790_10345 55235cc8501b903d0ea60011e12f95ec 665 Pfam PF03406 Phage tail fibre repeat 169 210 5.9E-20 T 01-11-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 D3790_10345 55235cc8501b903d0ea60011e12f95ec 665 Pfam PF03903 Phage T4 tail fibre 421 524 7.8E-10 T 01-11-2018 IPR005601 Tail fibre protein p36 D3790_05600 7981920f8ec40c467489c4c934719a7d 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 1.6E-7 T 01-11-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain D3790_05600 7981920f8ec40c467489c4c934719a7d 295 Gene3D G3DSA:1.10.3720.10 85 292 2.0E-17 T 01-11-2018 IPR035906 MetI-like superfamily D3790_05600 7981920f8ec40c467489c4c934719a7d 295 SUPERFAMILY SSF161098 89 275 4.06E-21 T 01-11-2018 IPR035906 MetI-like superfamily D3790_05600 7981920f8ec40c467489c4c934719a7d 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 294 9.9E-23 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_03320 aefa55054fc1e3a5341ded708854818f 100 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 19 92 8.2E-31 T 01-11-2018 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 D3790_10035 85610e7f21543b1f71fd39775affae86 172 Pfam PF10722 Putative bacterial sensory transduction regulator 11 134 5.5E-13 T 01-11-2018 IPR019660 Putative sensory transduction regulator YbjN D3790_18015 bd4174bb4a46d9469caf79d2b34f597b 91 Pfam PF04380 Membrane fusogenic activity 1 78 3.2E-29 T 01-11-2018 IPR007475 Membrane fusogenic activity D3790_12125 3a366e98365c3c67a6fd73e32a53ac23 172 SUPERFAMILY SSF50475 10 163 4.91E-46 T 01-11-2018 D3790_12125 3a366e98365c3c67a6fd73e32a53ac23 172 Pfam PF01613 Flavin reductase like domain 15 163 3.0E-26 T 01-11-2018 IPR002563 Flavin reductase like domain GO:0010181 D3790_12125 3a366e98365c3c67a6fd73e32a53ac23 172 TIGRFAM TIGR02296 HpaC: 4-hydroxyphenylacetate 3-monooxygenase, reductase component 11 164 1.3E-74 T 01-11-2018 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component GO:0016651|GO:0042537|GO:0051287|GO:0055114 KEGG: 00740+1.5.1.36 D3790_12125 3a366e98365c3c67a6fd73e32a53ac23 172 Gene3D G3DSA:2.30.110.10 1 170 1.8E-41 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 D3790_12125 3a366e98365c3c67a6fd73e32a53ac23 172 SMART SM00903 15 162 5.3E-49 T 01-11-2018 IPR002563 Flavin reductase like domain GO:0010181 D3790_11150 80ea26bbe794e588381ebc01512a7a6b 345 Pfam PF01609 Transposase DDE domain 143 329 9.5E-27 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_11150 80ea26bbe794e588381ebc01512a7a6b 345 Pfam PF05598 Transposase domain (DUF772) 57 129 1.7E-17 T 01-11-2018 IPR008490 Transposase InsH, N-terminal D3790_04810 89b92c2bb65c7033ba859c425dcb58fc 147 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 20.097 T 01-11-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 D3790_04810 89b92c2bb65c7033ba859c425dcb58fc 147 Gene3D G3DSA:1.20.58.1610 1 124 9.9E-43 T 01-11-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04810 89b92c2bb65c7033ba859c425dcb58fc 147 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 27 123 2.7E-31 T 01-11-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_00550 5946a21ff565d3aa47753c5d71c4b780 141 SUPERFAMILY SSF88723 1 137 1.29E-27 T 01-11-2018 IPR029060 PIN-like domain superfamily D3790_00550 5946a21ff565d3aa47753c5d71c4b780 141 Pfam PF01850 PIN domain 2 122 1.3E-11 T 01-11-2018 IPR002716 PIN domain D3790_00550 5946a21ff565d3aa47753c5d71c4b780 141 Gene3D G3DSA:3.40.50.1010 1 139 2.3E-39 T 01-11-2018 D3790_00550 5946a21ff565d3aa47753c5d71c4b780 141 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 136 9.678 T 01-11-2018 IPR022907 VapC family GO:0004540 D3790_07460 6ed56f89853c9f5b1b747564e6bd1efc 132 SUPERFAMILY SSF161084 4 125 1.57E-28 T 01-11-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily D3790_07460 6ed56f89853c9f5b1b747564e6bd1efc 132 Gene3D G3DSA:1.20.120.550 1 129 1.1E-23 T 01-11-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily D3790_07460 6ed56f89853c9f5b1b747564e6bd1efc 132 Pfam PF01124 MAPEG family 4 120 4.9E-24 T 01-11-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein D3790_14480 86d6a8d2927208c7f0d8161f5a3ad4a1 231 SUPERFAMILY SSF53098 74 190 1.37E-9 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_14480 86d6a8d2927208c7f0d8161f5a3ad4a1 231 Gene3D G3DSA:3.30.420.10 68 148 1.8E-5 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D3790_14480 86d6a8d2927208c7f0d8161f5a3ad4a1 231 Pfam PF13610 DDE domain 75 211 3.6E-45 T 01-11-2018 IPR032874 DDE domain D3790_05995 845a8a406704a083bb3117882e17f90f 624 Pfam PF05947 Type VI secretion system, TssF 6 622 9.7E-213 T 01-11-2018 IPR010272 Type VI secretion system, TssF-like D3790_05995 845a8a406704a083bb3117882e17f90f 624 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 624 1.5E-179 T 01-11-2018 IPR010272 Type VI secretion system, TssF-like D3790_05995 845a8a406704a083bb3117882e17f90f 624 PIRSF PIRSF028304 1 624 8.3E-173 T 01-11-2018 IPR010272 Type VI secretion system, TssF-like D3790_17680 83a7aef81791a11441663c0e51026406 130 Hamap MF_00048 UPF0102 protein YraN [yraN]. 12 124 21.86 T 01-11-2018 IPR003509 Uncharacterised protein family UPF0102 D3790_17680 83a7aef81791a11441663c0e51026406 130 Pfam PF02021 Uncharacterised protein family UPF0102 19 111 2.4E-24 T 01-11-2018 IPR003509 Uncharacterised protein family UPF0102 D3790_17680 83a7aef81791a11441663c0e51026406 130 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 14 124 1.5E-39 T 01-11-2018 IPR003509 Uncharacterised protein family UPF0102 D3790_17680 83a7aef81791a11441663c0e51026406 130 Gene3D G3DSA:3.40.1350.10 19 128 3.4E-30 T 01-11-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 D3790_17680 83a7aef81791a11441663c0e51026406 130 SUPERFAMILY SSF52980 13 125 1.07E-18 T 01-11-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 D3790_16550 55a81baa21e75afa83dc53c09e56251e 205 Pfam PF03458 UPF0126 domain 91 163 9.6E-22 T 01-11-2018 IPR005115 Uncharacterised domain UPF0126 D3790_16550 55a81baa21e75afa83dc53c09e56251e 205 Pfam PF03458 UPF0126 domain 5 78 2.8E-19 T 01-11-2018 IPR005115 Uncharacterised domain UPF0126 D3790_02885 b44d8d3636e640de619f4f3eee4b2bd5 415 Gene3D G3DSA:3.40.50.1820 16 415 3.5E-101 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_02885 b44d8d3636e640de619f4f3eee4b2bd5 415 SUPERFAMILY SSF53474 46 381 5.68E-44 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_02885 b44d8d3636e640de619f4f3eee4b2bd5 415 Hamap MF_01063 Esterase FrsA [frsA]. 1 415 58.635 T 01-11-2018 IPR010520 UPF0255 family D3790_02885 b44d8d3636e640de619f4f3eee4b2bd5 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 414 9.9E-173 T 01-11-2018 IPR010520 UPF0255 family D3790_16435 d9a979d3239c0469ee5f570f68d4984a 126 Pfam PF06476 Protein of unknown function (DUF1090) 12 108 1.0E-12 T 01-11-2018 IPR009468 Protein of unknown function DUF1090 D3790_06195 faa2c339ce9e72cc61c098af0a5f95ad 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 1.1E-54 T 01-11-2018 IPR016040 NAD(P)-binding domain D3790_06195 faa2c339ce9e72cc61c098af0a5f95ad 338 Gene3D G3DSA:3.40.50.720 4 316 1.5E-94 T 01-11-2018 D3790_06195 faa2c339ce9e72cc61c098af0a5f95ad 338 Gene3D G3DSA:3.90.25.10 180 328 1.5E-94 T 01-11-2018 D3790_06195 faa2c339ce9e72cc61c098af0a5f95ad 338 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.6E-25 T 01-11-2018 D3790_06195 faa2c339ce9e72cc61c098af0a5f95ad 338 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 1.6E-25 T 01-11-2018 D3790_06195 faa2c339ce9e72cc61c098af0a5f95ad 338 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 1.6E-25 T 01-11-2018 D3790_06195 faa2c339ce9e72cc61c098af0a5f95ad 338 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 1.6E-25 T 01-11-2018 D3790_06195 faa2c339ce9e72cc61c098af0a5f95ad 338 SUPERFAMILY SSF51735 1 333 3.56E-84 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily D3790_05510 a28ea61fa448c9249273110726b6950c 65 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 62 1.4E-34 T 01-11-2018 IPR020910 Uncharacterised protein family UPF0370 D3790_00135 8bcfad02749f560db89fb34dad95ebce 295 Pfam PF02371 Transposase IS116/IS110/IS902 family 169 251 2.0E-19 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D3790_00135 8bcfad02749f560db89fb34dad95ebce 295 Pfam PF01548 Transposase 19 127 2.0E-14 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D3790_16060 1cc59decdca69e4b0436efa868755b30 170 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 45 126 1.6E-14 T 01-11-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system D3790_16060 1cc59decdca69e4b0436efa868755b30 170 Gene3D G3DSA:3.10.450.620 33 118 3.5E-7 T 01-11-2018 D3790_16445 719df292fdbf553959ae7799013277e8 402 Pfam PF12323 Helix-turn-helix domain 1 48 2.0E-14 T 01-11-2018 IPR021027 Transposase, putative, helix-turn-helix domain D3790_16445 719df292fdbf553959ae7799013277e8 402 Pfam PF01385 Probable transposase 163 275 8.2E-27 T 01-11-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 D3790_16445 719df292fdbf553959ae7799013277e8 402 Pfam PF07282 Putative transposase DNA-binding domain 304 371 8.7E-24 T 01-11-2018 IPR010095 Transposase IS605, OrfB, C-terminal D3790_16445 719df292fdbf553959ae7799013277e8 402 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 244 331 4.0E-11 T 01-11-2018 IPR010095 Transposase IS605, OrfB, C-terminal D3790_05745 bb9697482e8edc685e1e421f33289d23 182 PIRSF PIRSF000847 1 181 5.8E-45 T 01-11-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 D3790_05745 bb9697482e8edc685e1e421f33289d23 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 01-11-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 D3790_05745 bb9697482e8edc685e1e421f33289d23 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 1.4E-60 T 01-11-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 D3790_05745 bb9697482e8edc685e1e421f33289d23 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.6E-16 T 01-11-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 D3790_05745 bb9697482e8edc685e1e421f33289d23 182 Gene3D G3DSA:1.20.120.1760 4 176 4.1E-15 T 01-11-2018 D3790_02545 5b4b21d4dd4121a7df34084895b6f0ba 107 Pfam PF12587 Protein of unknown function (DUF3761) 66 107 1.2E-11 T 01-11-2018 IPR022236 Protein of unknown function DUF3761 D3790_11105 0772fac733dd2ee721d744e868bfe246 246 Gene3D G3DSA:3.90.470.20 54 151 2.3E-5 T 01-11-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 D3790_11105 0772fac733dd2ee721d744e868bfe246 246 PRINTS PR01399 Enterobactin synthetase component D signature 66 86 2.5E-14 T 01-11-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 D3790_11105 0772fac733dd2ee721d744e868bfe246 246 PRINTS PR01399 Enterobactin synthetase component D signature 96 114 2.5E-14 T 01-11-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 D3790_11105 0772fac733dd2ee721d744e868bfe246 246 PRINTS PR01399 Enterobactin synthetase component D signature 173 189 2.5E-14 T 01-11-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 D3790_11105 0772fac733dd2ee721d744e868bfe246 246 SUPERFAMILY SSF56214 131 210 6.63E-12 T 01-11-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 D3790_11105 0772fac733dd2ee721d744e868bfe246 246 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 131 224 2.3E-14 T 01-11-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 D3790_15605 4dd2d5b6b5f2b4464ad34b128e02dcf0 88 SUPERFAMILY SSF52540 5 53 8.18E-11 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_15605 4dd2d5b6b5f2b4464ad34b128e02dcf0 88 Pfam PF13175 AAA ATPase domain 5 54 2.3E-12 T 01-11-2018 D3790_15605 4dd2d5b6b5f2b4464ad34b128e02dcf0 88 Gene3D G3DSA:3.40.50.300 5 85 4.7E-16 T 01-11-2018 D3790_06710 c66fc991e6e837390e14664166ea008a 119 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 27 119 3.0E-32 T 01-11-2018 IPR009700 Protein of unknown function DUF1283 D3790_06710 c66fc991e6e837390e14664166ea008a 119 Pfam PF06932 Protein of unknown function (DUF1283) 37 119 1.0E-40 T 01-11-2018 IPR009700 Protein of unknown function DUF1283 D3790_06710 c66fc991e6e837390e14664166ea008a 119 Hamap MF_01581 UPF0482 protein YnfB [ynfB]. 1 119 26.168 T 01-11-2018 IPR009700 Protein of unknown function DUF1283 D3790_02860 d7d7b413a0322a7de747ca1365d7efd9 678 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 19 503 2.1E-173 T 01-11-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 D3790_02860 d7d7b413a0322a7de747ca1365d7efd9 678 ProSitePatterns PS01303 BCCT family of transporters signature. 320 329 - T 01-11-2018 IPR018093 BCCT transporter, conserved site D3790_02860 d7d7b413a0322a7de747ca1365d7efd9 678 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 57 504 2.6E-172 T 01-11-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 D3790_11930 34cbeb988b3e05a501e6f5334371a3e4 207 PIRSF PIRSF011489 1 195 6.6E-75 T 01-11-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 D3790_11930 34cbeb988b3e05a501e6f5334371a3e4 207 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 4.3E-29 T 01-11-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 D3790_03875 bfa1bd427678b420dcf3555cddb3aab1 302 SUPERFAMILY SSF142338 11 295 1.57E-81 T 01-11-2018 D3790_03875 bfa1bd427678b420dcf3555cddb3aab1 302 Pfam PF01933 Uncharacterised protein family UPF0052 12 294 6.3E-76 T 01-11-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 D3790_03875 bfa1bd427678b420dcf3555cddb3aab1 302 Hamap MF_00973 Gluconeogenesis factor. 8 300 31.339 T 01-11-2018 IPR010119 Gluconeogenesis factor D3790_03875 bfa1bd427678b420dcf3555cddb3aab1 302 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 261 5.7E-94 T 01-11-2018 IPR010119 Gluconeogenesis factor D3790_03875 bfa1bd427678b420dcf3555cddb3aab1 302 Gene3D G3DSA:3.40.50.12300 9 301 4.9E-78 T 01-11-2018 IPR038136 Gluconeogenesis factor superfamily D3790_05015 5472ce23ed5456d995866430f8d40f2e 495 ProSitePatterns PS00218 Amino acid permeases signature. 49 80 - T 01-11-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 D3790_05015 5472ce23ed5456d995866430f8d40f2e 495 PIRSF PIRSF006060 4 493 5.5E-82 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D3790_05015 5472ce23ed5456d995866430f8d40f2e 495 Gene3D G3DSA:1.20.1740.10 15 487 7.5E-64 T 01-11-2018 D3790_05015 5472ce23ed5456d995866430f8d40f2e 495 Pfam PF00324 Amino acid permease 24 482 6.0E-144 T 01-11-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 D3790_04500 f078b99b2aa45cc89d79c2f6205b07dd 208 Pfam PF02525 Flavodoxin-like fold 10 169 1.6E-37 T 01-11-2018 IPR003680 Flavodoxin-like fold D3790_04500 f078b99b2aa45cc89d79c2f6205b07dd 208 SUPERFAMILY SSF52218 10 174 1.38E-41 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_04500 f078b99b2aa45cc89d79c2f6205b07dd 208 Gene3D G3DSA:3.40.50.360 10 185 2.4E-48 T 01-11-2018 IPR029039 Flavoprotein-like superfamily D3790_01420 2f6acc50eda8cd168cb788c31057e5ef 190 Gene3D G3DSA:1.10.357.10 2 179 9.2E-19 T 01-11-2018 D3790_01420 2f6acc50eda8cd168cb788c31057e5ef 190 SUPERFAMILY SSF48498 73 156 6.76E-5 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D3790_10675 d76c7c1a3f86ffa95f926f20b32e71f6 194 SUPERFAMILY SSF53448 5 119 1.74E-6 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_14990 714e1bcdd4cc8bbbf28febf6710dc54f 65 Gene3D G3DSA:3.40.50.2000 1 64 4.1E-9 T 01-11-2018 D3790_14990 714e1bcdd4cc8bbbf28febf6710dc54f 65 SUPERFAMILY SSF53756 15 59 3.37E-5 T 01-11-2018 D3790_01535 c8717be98a95a75e259f77c176a6323b 110 SUPERFAMILY SSF46689 10 97 1.97E-16 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_01535 c8717be98a95a75e259f77c176a6323b 110 Pfam PF01527 Transposase 10 80 1.2E-14 T 01-11-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D3790_01535 c8717be98a95a75e259f77c176a6323b 110 Gene3D G3DSA:1.10.10.60 13 97 4.8E-11 T 01-11-2018 D3790_05710 3de3976f18db66e7c7383e786aacb0f2 167 Gene3D G3DSA:3.40.630.30 1 165 3.3E-43 T 01-11-2018 D3790_05710 3de3976f18db66e7c7383e786aacb0f2 167 SUPERFAMILY SSF55729 3 162 4.12E-38 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_05710 3de3976f18db66e7c7383e786aacb0f2 167 Pfam PF00583 Acetyltransferase (GNAT) family 48 137 6.8E-21 T 01-11-2018 IPR000182 GNAT domain D3790_16835 0059c4426542c5ecdc5eafbd7ea79594 234 SUPERFAMILY SSF53335 36 189 1.37E-26 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_16835 0059c4426542c5ecdc5eafbd7ea79594 234 Gene3D G3DSA:3.40.50.150 31 224 5.6E-28 T 01-11-2018 D3790_16835 0059c4426542c5ecdc5eafbd7ea79594 234 Pfam PF13847 Methyltransferase domain 68 198 1.0E-15 T 01-11-2018 IPR025714 Methyltransferase domain D3790_10505 bf81a8991da30bbf09568b8d8151fb71 263 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 6 251 8.0E-74 T 01-11-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 D3790_10505 bf81a8991da30bbf09568b8d8151fb71 263 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 7 241 3.9E-50 T 01-11-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 D3790_00400 7a1927125fd6428da5d7f2da80a0448c 118 Pfam PF13665 Domain of unknown function (DUF4150) 15 117 6.0E-31 T 01-11-2018 IPR025425 Domain of unknown function DUF4150 D3790_02075 25efad6cc0d3d2f2a4c87cb27bed4e4f 94 Pfam PF13700 Domain of unknown function (DUF4158) 4 49 2.0E-6 T 01-11-2018 IPR025296 Domain of unknown function DUF4158 D3790_14705 814b5b196a96ea470c245482f74f0ece 213 Gene3D G3DSA:3.40.50.2020 1 213 4.3E-78 T 01-11-2018 D3790_14705 814b5b196a96ea470c245482f74f0ece 213 Pfam PF00156 Phosphoribosyl transferase domain 44 162 4.6E-13 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 D3790_14705 814b5b196a96ea470c245482f74f0ece 213 SUPERFAMILY SSF53271 2 211 1.93E-47 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like D3790_14705 814b5b196a96ea470c245482f74f0ece 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 35.602 T 01-11-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D3790_14705 814b5b196a96ea470c245482f74f0ece 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 1.5E-67 T 01-11-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D3790_05190 c0a0a77efd3adef1fe85b010521b739a 191 Gene3D G3DSA:3.40.50.10610 56 191 1.4E-47 T 01-11-2018 D3790_05190 c0a0a77efd3adef1fe85b010521b739a 191 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 1 191 34.06 T 01-11-2018 IPR014094 Penicillin-binding protein activator LpoB D3790_05190 c0a0a77efd3adef1fe85b010521b739a 191 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 2 190 1.4E-46 T 01-11-2018 IPR014094 Penicillin-binding protein activator LpoB D3790_05190 c0a0a77efd3adef1fe85b010521b739a 191 Pfam PF13036 Peptidoglycan-synthase activator LpoB 53 190 1.2E-29 T 01-11-2018 IPR014094 Penicillin-binding protein activator LpoB D3790_16030 c57f92b18f4ad037b0ba9b310808bd22 265 Gene3D G3DSA:1.10.10.60 174 264 4.2E-6 T 01-11-2018 D3790_16030 c57f92b18f4ad037b0ba9b310808bd22 265 Gene3D G3DSA:3.30.450.40 4 170 4.4E-5 T 01-11-2018 IPR029016 GAF-like domain superfamily D3790_16030 c57f92b18f4ad037b0ba9b310808bd22 265 SUPERFAMILY SSF46689 208 262 1.3E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_16030 c57f92b18f4ad037b0ba9b310808bd22 265 SUPERFAMILY SSF55781 31 145 2.75E-5 T 01-11-2018 D3790_02425 ae1126e18b4df522f2ee1e52f9790dd4 140 Gene3D G3DSA:1.25.40.10 32 137 8.5E-12 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_02425 ae1126e18b4df522f2ee1e52f9790dd4 140 SUPERFAMILY SSF48452 34 124 2.04E-11 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D3790_05200 a5b027636b62e06d57bdb1dc0bfff2df 339 SUPERFAMILY SSF51445 2 295 7.9E-84 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily D3790_05200 a5b027636b62e06d57bdb1dc0bfff2df 339 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 333 47.499 T 01-11-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 D3790_05200 a5b027636b62e06d57bdb1dc0bfff2df 339 Gene3D G3DSA:3.20.20.300 1 339 1.8E-124 T 01-11-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 D3790_05200 a5b027636b62e06d57bdb1dc0bfff2df 339 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 10 290 8.7E-93 T 01-11-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D3790_05200 a5b027636b62e06d57bdb1dc0bfff2df 339 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 01-11-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 D3790_08610 162a6f14455669ee56e485a85f4b4dfb 128 Gene3D G3DSA:2.60.120.10 15 119 4.8E-17 T 01-11-2018 IPR014710 RmlC-like jelly roll fold D3790_08610 162a6f14455669ee56e485a85f4b4dfb 128 SUPERFAMILY SSF51182 24 126 8.09E-15 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily D3790_08610 162a6f14455669ee56e485a85f4b4dfb 128 Pfam PF07883 Cupin domain 38 111 2.0E-7 T 01-11-2018 IPR013096 Cupin 2, conserved barrel D3790_15890 7fbb955a2360667e0d921512abd9fa2f 101 Gene3D G3DSA:1.20.1250.20 2 101 1.6E-10 T 01-11-2018 D3790_15890 7fbb955a2360667e0d921512abd9fa2f 101 Pfam PF07690 Major Facilitator Superfamily 8 89 2.7E-9 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_15890 7fbb955a2360667e0d921512abd9fa2f 101 SUPERFAMILY SSF103473 6 96 1.29E-12 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_17460 3f5420044dce0aa61a7ed25a05a8e95a 389 SUPERFAMILY SSF53098 31 377 3.49E-20 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_17460 3f5420044dce0aa61a7ed25a05a8e95a 389 Pfam PF13546 DDE superfamily endonuclease 19 237 4.5E-56 T 01-11-2018 IPR038721 Transposase IS701-like, DDE domain D3790_02570 878687c3baffd62b70daa9f10ecd5022 343 SUPERFAMILY SSF46689 18 137 7.35E-15 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_02570 878687c3baffd62b70daa9f10ecd5022 343 Pfam PF13565 Homeodomain-like domain 57 136 1.6E-12 T 01-11-2018 D3790_02570 878687c3baffd62b70daa9f10ecd5022 343 Gene3D G3DSA:3.30.420.470 143 326 2.1E-10 T 01-11-2018 D3790_02570 878687c3baffd62b70daa9f10ecd5022 343 Pfam PF13358 DDE superfamily endonuclease 177 309 3.5E-22 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_00590 878687c3baffd62b70daa9f10ecd5022 343 SUPERFAMILY SSF46689 18 137 7.35E-15 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_00590 878687c3baffd62b70daa9f10ecd5022 343 Pfam PF13565 Homeodomain-like domain 57 136 1.6E-12 T 01-11-2018 D3790_00590 878687c3baffd62b70daa9f10ecd5022 343 Gene3D G3DSA:3.30.420.470 143 326 2.1E-10 T 01-11-2018 D3790_00590 878687c3baffd62b70daa9f10ecd5022 343 Pfam PF13358 DDE superfamily endonuclease 177 309 3.5E-22 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_05135 73c16ec31b532594cbac975c3e8b1b35 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 3.1E-144 T 01-11-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 D3790_05135 73c16ec31b532594cbac975c3e8b1b35 317 Gene3D G3DSA:3.40.47.10 1 317 1.8E-124 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_05135 73c16ec31b532594cbac975c3e8b1b35 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 2.6E-33 T 01-11-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 D3790_05135 73c16ec31b532594cbac975c3e8b1b35 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 71.22 T 01-11-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 D3790_05135 73c16ec31b532594cbac975c3e8b1b35 317 SUPERFAMILY SSF53901 4 317 1.23E-71 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_05135 73c16ec31b532594cbac975c3e8b1b35 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 5.0E-36 T 01-11-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 D3790_03625 b269e61bceda9e5d4c22ed92167c3978 69 Pfam PF10725 Protein of unknown function (DUF2517) 4 64 4.8E-38 T 01-11-2018 IPR019663 Uncharacterised protein YbfA D3790_12425 d41424f1706ad5d9cf7fa0effae5cd08 253 Pfam PF13586 Transposase DDE domain 163 248 5.7E-18 T 01-11-2018 IPR025668 Transposase DDE domain D3790_12425 d41424f1706ad5d9cf7fa0effae5cd08 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 7.2E-20 T 01-11-2018 IPR025161 Putative transposase IS4/IS5 family D3790_12985 9d529a3d106216d8b5b5535827b7c9ba 663 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 173 626 99.247 T 01-11-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 D3790_12985 9d529a3d106216d8b5b5535827b7c9ba 663 Pfam PF01964 Radical SAM ThiC family 174 621 1.3E-198 T 01-11-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 D3790_12985 9d529a3d106216d8b5b5535827b7c9ba 663 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 173 625 3.5E-222 T 01-11-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 D3790_12985 9d529a3d106216d8b5b5535827b7c9ba 663 Pfam PF13667 ThiC-associated domain 53 134 3.6E-33 T 01-11-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 D3790_12985 9d529a3d106216d8b5b5535827b7c9ba 663 Gene3D G3DSA:3.20.20.540 244 557 5.5E-153 T 01-11-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 D3790_18280 c3e437905cb009b3b88b9ee7f6e3099e 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 4.3E-25 T 01-11-2018 IPR006696 Protein of unknown function DUF423 D3790_06520 4d8a772d0f54bc1a0620554ed0ce8170 102 Pfam PF01710 Transposase 1 101 4.3E-20 T 01-11-2018 IPR002622 Transposase, Synechocystis PCC 6803 D3790_07125 e568c3eeff22a6d1bc5bbb8de9f42f3a 90 Gene3D G3DSA:1.20.5.780 5 87 3.5E-11 T 01-11-2018 D3790_07125 e568c3eeff22a6d1bc5bbb8de9f42f3a 90 Pfam PF08681 Protein of unknown function (DUF1778) 10 83 3.4E-23 T 01-11-2018 IPR014795 Vibrio phage ICP1, Orf50 D3790_07125 e568c3eeff22a6d1bc5bbb8de9f42f3a 90 SUPERFAMILY SSF47598 6 83 4.89E-21 T 01-11-2018 IPR010985 Ribbon-helix-helix GO:0006355 D3790_19550 f61a8db15c08cdb036dbd3c8ff26b608 163 Gene3D G3DSA:3.30.420.470 58 163 2.7E-6 T 01-11-2018 D3790_19550 f61a8db15c08cdb036dbd3c8ff26b608 163 Pfam PF13358 DDE superfamily endonuclease 35 163 1.1E-21 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_02465 b145ed3a0883a69a02a7677a839c89ce 72 Gene3D G3DSA:3.10.170.10 4 72 1.7E-5 T 01-11-2018 D3790_02465 b145ed3a0883a69a02a7677a839c89ce 72 Pfam PF16485 Protealysin propeptide 9 49 7.6E-20 T 01-11-2018 IPR032475 Protealysin, N-terminal propeptide D3790_18965 ec5dd096178e9081f7e34490e36dfab3 545 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 538 56.465 T 01-11-2018 IPR010232 Probable protein kinase UbiB GO:0006744 D3790_18965 ec5dd096178e9081f7e34490e36dfab3 545 Pfam PF03109 ABC1 family 112 230 5.8E-35 T 01-11-2018 IPR004147 UbiB domain D3790_18965 ec5dd096178e9081f7e34490e36dfab3 545 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 442 2.1E-175 T 01-11-2018 IPR010232 Probable protein kinase UbiB GO:0006744 D3790_18965 ec5dd096178e9081f7e34490e36dfab3 545 SUPERFAMILY SSF56112 94 434 1.85E-50 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily D3790_10835 bfbde382f474182c58fd97332ddaa747 338 SUPERFAMILY SSF53686 28 324 8.12E-53 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D3790_10835 bfbde382f474182c58fd97332ddaa747 338 Gene3D G3DSA:3.40.50.1100 31 323 5.8E-64 T 01-11-2018 D3790_10835 bfbde382f474182c58fd97332ddaa747 338 Gene3D G3DSA:3.40.50.1100 64 166 5.8E-64 T 01-11-2018 D3790_10835 bfbde382f474182c58fd97332ddaa747 338 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 319 5.0E-37 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D3790_19120 25897ddce681a6a9f1be4e142d6e13d7 105 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 34.574 T 01-11-2018 IPR023081 Cell division protein FtsB D3790_19120 25897ddce681a6a9f1be4e142d6e13d7 105 Pfam PF04977 Septum formation initiator 11 89 6.3E-30 T 01-11-2018 IPR007060 Septum formation initiator FtsL/DivIC D3790_19120 25897ddce681a6a9f1be4e142d6e13d7 105 Gene3D G3DSA:1.20.5.400 21 63 1.5E-11 T 01-11-2018 D3790_00405 a41469bbd4057eebfd753db55e6a440a 408 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 21 370 1.6E-84 T 01-11-2018 IPR018683 Domain of unknown function DUF2169 D3790_10810 ff939977103a7d59d61fec23e9b58124 101 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 60 84 0.0035 T 01-11-2018 IPR006530 YD repeat D3790_10810 ff939977103a7d59d61fec23e9b58124 101 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 65 95 1.0E-4 T 01-11-2018 IPR006530 YD repeat D3790_08125 c3c1ace876a5d8e5429cff542121719d 84 Pfam PF06945 Protein of unknown function (DUF1289) 17 62 3.6E-17 T 01-11-2018 IPR010710 Protein of unknown function DUF1289 D3790_10205 e9889b9cdeccce7e168f5748921f01b2 240 Pfam PF02698 DUF218 domain 49 173 2.8E-16 T 01-11-2018 IPR003848 Domain of unknown function DUF218 D3790_10205 e9889b9cdeccce7e168f5748921f01b2 240 PIRSF PIRSF005011 1 240 4.5E-138 T 01-11-2018 IPR023604 Uncharacterised protein family SanA D3790_08015 792c411dceec42cc388539794f9c8cfe 58 Pfam PF13358 DDE superfamily endonuclease 3 29 9.4E-8 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_16975 0a67549d3fd47b203db048d793c00525 200 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 4 188 27.167 T 01-11-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 D3790_16975 0a67549d3fd47b203db048d793c00525 200 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 6 185 5.1E-66 T 01-11-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 D3790_16975 0a67549d3fd47b203db048d793c00525 200 SUPERFAMILY SSF53448 4 184 1.2E-29 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_16975 0a67549d3fd47b203db048d793c00525 200 Gene3D G3DSA:3.90.550.10 2 198 6.4E-52 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_16975 0a67549d3fd47b203db048d793c00525 200 Pfam PF12804 MobA-like NTP transferase domain 8 160 5.9E-30 T 01-11-2018 IPR025877 MobA-like NTP transferase D3790_19195 f8ccad040a53eef18c33a4882cbad4ab 187 Pfam PF00589 Phage integrase family 5 174 1.6E-42 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D3790_19195 f8ccad040a53eef18c33a4882cbad4ab 187 Gene3D G3DSA:1.10.443.10 1 186 1.3E-41 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D3790_19195 f8ccad040a53eef18c33a4882cbad4ab 187 SUPERFAMILY SSF56349 2 185 2.33E-44 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D3790_16425 7d2ef7151ecf1f721c8c97968b7cfe3e 147 Pfam PF02566 OsmC-like protein 37 141 1.4E-20 T 01-11-2018 IPR003718 OsmC/Ohr family D3790_16425 7d2ef7151ecf1f721c8c97968b7cfe3e 147 Gene3D G3DSA:3.30.300.20 2 147 1.3E-34 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta D3790_16425 7d2ef7151ecf1f721c8c97968b7cfe3e 147 SUPERFAMILY SSF82784 3 143 9.55E-36 T 01-11-2018 IPR036102 OsmC/Ohr superfamily D3790_10190 df57cbaa2c946b23ebe25428538a1b58 231 Pfam PF04172 LrgB-like family 12 224 1.1E-78 T 01-11-2018 IPR007300 CidB/LrgB family D3790_10190 df57cbaa2c946b23ebe25428538a1b58 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 4 226 2.7E-97 T 01-11-2018 IPR005261 Conserved hypothetical protein CHP00659 D3790_09810 b231bc768532f836c394b8b825dfe410 118 SUPERFAMILY SSF56784 32 116 1.19E-26 T 01-11-2018 IPR036412 HAD-like superfamily D3790_09810 b231bc768532f836c394b8b825dfe410 118 Gene3D G3DSA:3.40.50.1000 24 118 3.0E-37 T 01-11-2018 IPR023214 HAD superfamily D3790_09810 b231bc768532f836c394b8b825dfe410 118 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 24 116 5.3E-9 T 01-11-2018 IPR005519 Acid phosphatase, class B-like D3790_07480 def915537dc5704937270408e0cdbb79 184 SUPERFAMILY SSF54593 3 183 1.8E-65 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D3790_07480 def915537dc5704937270408e0cdbb79 184 Gene3D G3DSA:3.10.180.10 1 184 2.0E-69 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D3790_07480 def915537dc5704937270408e0cdbb79 184 Pfam PF06185 YecM protein 10 183 4.5E-70 T 01-11-2018 IPR010393 Protein of unknown function DUF991 D3790_19655 13fead40ec9c47ce189c91c9ec8ca69a 87 Gene3D G3DSA:2.60.200.60 22 86 4.2E-5 T 01-11-2018 D3790_19655 13fead40ec9c47ce189c91c9ec8ca69a 87 Pfam PF05488 PAAR motif 10 79 6.5E-18 T 01-11-2018 IPR008727 PAAR motif D3790_03955 efc54731ec5513dcdb33ae18835b0a3d 127 Pfam PF15594 Immunity protein 50 9 124 9.7E-30 T 01-11-2018 IPR028957 Immunity protein 50 D3790_10165 d91efd63b5ade8386bba2230876294f6 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 4.4E-66 T 01-11-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 D3790_10165 d91efd63b5ade8386bba2230876294f6 193 Pfam PF00692 dUTPase 79 184 1.3E-9 T 01-11-2018 IPR029054 dUTPase-like D3790_10165 d91efd63b5ade8386bba2230876294f6 193 Gene3D G3DSA:2.70.40.10 1 193 1.0E-50 T 01-11-2018 IPR036157 dUTPase-like superfamily D3790_10165 d91efd63b5ade8386bba2230876294f6 193 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 33.405 T 01-11-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 D3790_10165 d91efd63b5ade8386bba2230876294f6 193 SUPERFAMILY SSF51283 1 192 2.22E-59 T 01-11-2018 IPR036157 dUTPase-like superfamily D3790_00150 4745d6b97d071a4996ca009a7edcc0a5 243 Pfam PF15579 Immunity protein 52 137 237 4.8E-25 T 01-11-2018 IPR028969 Immunity protein 52 D3790_01380 d1f608a59b27d5655924038b315ebb8c 341 Gene3D G3DSA:3.40.47.10 177 337 4.9E-14 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_01380 d1f608a59b27d5655924038b315ebb8c 341 Gene3D G3DSA:3.40.47.10 3 166 1.3E-17 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_01380 d1f608a59b27d5655924038b315ebb8c 341 SUPERFAMILY SSF53901 152 338 3.05E-10 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_01380 d1f608a59b27d5655924038b315ebb8c 341 SUPERFAMILY SSF53901 39 166 1.65E-16 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 D3790_01380 d1f608a59b27d5655924038b315ebb8c 341 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 269 338 1.9E-9 T 01-11-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 D3790_18165 f5932712fb9e731fab1108c48d72b2da 296 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 278 9.9E-80 T 01-11-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 D3790_18165 f5932712fb9e731fab1108c48d72b2da 296 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 283 19.921 T 01-11-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 D3790_18165 f5932712fb9e731fab1108c48d72b2da 296 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 01-11-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 D3790_18165 f5932712fb9e731fab1108c48d72b2da 296 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 284 5.0E-99 T 01-11-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 D3790_03635 e709c8cf09eb739804aa229c8eb06614 98 Pfam PF13744 Helix-turn-helix domain 9 87 9.5E-13 T 01-11-2018 IPR039554 HigA2-like, helix-turn-helix domain D3790_03635 e709c8cf09eb739804aa229c8eb06614 98 SMART SM00530 31 86 2.6E-6 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_03635 e709c8cf09eb739804aa229c8eb06614 98 Gene3D G3DSA:1.10.260.40 15 90 1.5E-11 T 01-11-2018 D3790_03635 e709c8cf09eb739804aa229c8eb06614 98 SUPERFAMILY SSF47413 18 92 4.56E-15 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_16635 3f58cbb223edb553dbd3f10b88e6aa22 336 Pfam PF02371 Transposase IS116/IS110/IS902 family 207 285 1.1E-22 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D3790_16635 3f58cbb223edb553dbd3f10b88e6aa22 336 Pfam PF01548 Transposase 1 136 2.5E-12 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D3790_16085 3f58cbb223edb553dbd3f10b88e6aa22 336 Pfam PF02371 Transposase IS116/IS110/IS902 family 207 285 1.1E-22 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D3790_16085 3f58cbb223edb553dbd3f10b88e6aa22 336 Pfam PF01548 Transposase 1 136 2.5E-12 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D3790_07935 b5c6e7624f3cd90b6692f2eeb8f910b9 58 Gene3D G3DSA:3.30.2310.20 1 54 9.1E-7 T 01-11-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D3790_04120 74c88cb07f407a150df93dda1c72db12 114 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 114 3.0E-40 T 01-11-2018 IPR020489 Uncharacterised protein family YejG D3790_04120 74c88cb07f407a150df93dda1c72db12 114 Pfam PF13989 YejG-like protein 4 108 2.5E-47 T 01-11-2018 IPR020489 Uncharacterised protein family YejG D3790_09045 1ad2692d340876c0ab04e8c3847866ed 525 Pfam PF06074 Protein of unknown function (DUF935) 9 521 4.3E-202 T 01-11-2018 IPR009279 Protein of unknown function DUF935 D3790_01935 caba045478c6292e2fbbd07e91607bbc 359 Pfam PF15608 PELOTA RNA binding domain 277 357 2.5E-29 T 01-11-2018 IPR028157 PELOTA RNA-binding domain D3790_01935 caba045478c6292e2fbbd07e91607bbc 359 PIRSF PIRSF020979 1 359 1.5E-177 T 01-11-2018 IPR011215 Phosphoribosyl transferase D3790_01935 caba045478c6292e2fbbd07e91607bbc 359 Pfam PF11202 Phosphoribosyl transferase (PRTase) 9 248 4.1E-91 T 01-11-2018 IPR011215 Phosphoribosyl transferase D3790_06760 dcf328a5c4fc8a2eda3c1b6d3f98ae8f 165 Pfam PF07080 Protein of unknown function (DUF1348) 18 147 3.5E-64 T 01-11-2018 IPR009783 Protein of unknown function DUF1348 D3790_06760 dcf328a5c4fc8a2eda3c1b6d3f98ae8f 165 Gene3D G3DSA:3.10.450.50 21 165 1.9E-77 T 01-11-2018 D3790_06760 dcf328a5c4fc8a2eda3c1b6d3f98ae8f 165 SUPERFAMILY SSF54427 12 165 7.83E-78 T 01-11-2018 IPR032710 NTF2-like domain superfamily D3790_06930 dcf328a5c4fc8a2eda3c1b6d3f98ae8f 165 Pfam PF07080 Protein of unknown function (DUF1348) 18 147 3.5E-64 T 01-11-2018 IPR009783 Protein of unknown function DUF1348 D3790_06930 dcf328a5c4fc8a2eda3c1b6d3f98ae8f 165 Gene3D G3DSA:3.10.450.50 21 165 1.9E-77 T 01-11-2018 D3790_06930 dcf328a5c4fc8a2eda3c1b6d3f98ae8f 165 SUPERFAMILY SSF54427 12 165 7.83E-78 T 01-11-2018 IPR032710 NTF2-like domain superfamily D3790_18185 487015584c9f5f818f264e442039cc6b 559 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 294 533 2.8E-14 T 01-11-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 D3790_18185 487015584c9f5f818f264e442039cc6b 559 SUPERFAMILY SSF51197 252 548 1.51E-53 T 01-11-2018 D3790_18185 487015584c9f5f818f264e442039cc6b 559 Gene3D G3DSA:3.60.130.10 254 553 4.4E-71 T 01-11-2018 D3790_10075 8ad26bab8a5377db0777a8f5671c2b4d 16 Pfam PF08047 Histidine operon leader peptide 1 16 2.4E-8 T 01-11-2018 IPR012565 Histidine operon leader peptide GO:0000105 D3790_10610 1401118a19f1fd93abcbc5828821be64 579 SUPERFAMILY SSF64182 48 466 6.28E-116 T 01-11-2018 IPR038763 DHH phosphoesterase superfamily D3790_10610 1401118a19f1fd93abcbc5828821be64 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 573 2.3E-158 T 01-11-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 D3790_10610 1401118a19f1fd93abcbc5828821be64 579 Pfam PF01368 DHH family 74 206 5.3E-10 T 01-11-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 D3790_10610 1401118a19f1fd93abcbc5828821be64 579 Gene3D G3DSA:2.40.50.460 459 576 3.2E-6 T 01-11-2018 D3790_10610 1401118a19f1fd93abcbc5828821be64 579 Gene3D G3DSA:3.90.1640.30 48 326 1.7E-89 T 01-11-2018 D3790_10610 1401118a19f1fd93abcbc5828821be64 579 Pfam PF02272 DHHA1 domain 322 452 1.6E-25 T 01-11-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 D3790_10610 1401118a19f1fd93abcbc5828821be64 579 Gene3D G3DSA:3.10.310.30 329 458 3.9E-30 T 01-11-2018 D3790_08510 6ee67d388f3ed98edf070e5fa93fc2de 123 Gene3D G3DSA:3.10.450.300 26 123 5.3E-39 T 01-11-2018 IPR038703 YebF/Cmi superfamily D3790_08510 6ee67d388f3ed98edf070e5fa93fc2de 123 ProDom PD077599 YEBF LIPOPROTEIN EXPORTED PERIPLASMIC PRECURSOR SIGNAL SIMILAR PALMITATE MEMBRANE ESCHERICHIA 25 119 1.0E-33 T 01-11-2018 IPR025603 YebF/Colicin-M immunity protein D3790_08510 6ee67d388f3ed98edf070e5fa93fc2de 123 Pfam PF13995 YebF-like protein 32 120 1.0E-41 T 01-11-2018 IPR025603 YebF/Colicin-M immunity protein D3790_01740 aaf5a0ce5685a8c805bca9574aae488e 583 Pfam PF05947 Type VI secretion system, TssF 8 580 8.5E-100 T 01-11-2018 IPR010272 Type VI secretion system, TssF-like D3790_01385 ad3f22f5c8f5fc38b740fa008f9adda2 166 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 8 163 2.8E-10 T 01-11-2018 IPR018681 Protein of unknown function DUF2165, transmembrane D3790_05925 0ae7723d7acdce468d9ea5e3beb8a7d7 514 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 513 2.9E-272 T 01-11-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 D3790_05925 0ae7723d7acdce468d9ea5e3beb8a7d7 514 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 514 347.025 T 01-11-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 D3790_05925 0ae7723d7acdce468d9ea5e3beb8a7d7 514 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 512 1.2E-270 T 01-11-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 D3790_14980 347b497b082017e36709bd2f922839a4 380 SUPERFAMILY SSF53756 38 375 7.85E-45 T 01-11-2018 D3790_14980 347b497b082017e36709bd2f922839a4 380 Pfam PF00534 Glycosyl transferases group 1 189 352 2.7E-17 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 D3790_14980 347b497b082017e36709bd2f922839a4 380 Pfam PF13439 Glycosyltransferase Family 4 36 173 1.2E-10 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D3790_14980 347b497b082017e36709bd2f922839a4 380 Gene3D G3DSA:3.40.50.2000 32 176 2.8E-9 T 01-11-2018 D3790_14980 347b497b082017e36709bd2f922839a4 380 Gene3D G3DSA:3.40.50.2000 177 359 2.4E-29 T 01-11-2018 D3790_08280 843556ce56c64ad4bc9ce9379725333b 111 Gene3D G3DSA:3.30.390.50 55 110 1.9E-12 T 01-11-2018 D3790_08280 843556ce56c64ad4bc9ce9379725333b 111 SUPERFAMILY SSF82649 55 102 1.52E-10 T 01-11-2018 D3790_08280 843556ce56c64ad4bc9ce9379725333b 111 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 56 101 2.8E-9 T 01-11-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 D3790_11640 c0109b1cfa0e3b3eb3c818158d429200 179 SUPERFAMILY SSF53271 3 174 1.44E-53 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like D3790_11640 c0109b1cfa0e3b3eb3c818158d429200 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 174 4.3E-72 T 01-11-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 D3790_11640 c0109b1cfa0e3b3eb3c818158d429200 179 Pfam PF00156 Phosphoribosyl transferase domain 13 161 7.2E-25 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 D3790_11640 c0109b1cfa0e3b3eb3c818158d429200 179 Gene3D G3DSA:3.40.50.2020 1 178 9.9E-66 T 01-11-2018 D3790_02680 8e9903eefa3b5b7ce41f2fc0318f1062 172 Pfam PF04985 Phage tail tube protein FII 4 170 1.3E-66 T 01-11-2018 IPR006498 Tail tube protein D3790_02680 8e9903eefa3b5b7ce41f2fc0318f1062 172 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 171 5.8E-52 T 01-11-2018 IPR006498 Tail tube protein D3790_11540 f5f72b54374eb4663d1075f6a880170b 151 SUPERFAMILY SSF141322 91 149 4.18E-6 T 01-11-2018 D3790_11540 f5f72b54374eb4663d1075f6a880170b 151 Gene3D G3DSA:2.40.50.140 81 151 2.3E-10 T 01-11-2018 D3790_11540 f5f72b54374eb4663d1075f6a880170b 151 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 149 1.8E-23 T 01-11-2018 IPR002810 NfeD-like, C-terminal domain D3790_12645 79cea984296596eb9d2124e000633f48 156 PIRSF PIRSF003174 1 156 7.0E-67 T 01-11-2018 IPR010292 Uncharacterised protein family CreA D3790_12645 79cea984296596eb9d2124e000633f48 156 Pfam PF05981 CreA protein 25 156 2.8E-58 T 01-11-2018 IPR010292 Uncharacterised protein family CreA D3790_14485 1268bb903a866e9a4e28b8dd2aaed940 67 Pfam PF01710 Transposase 1 67 1.3E-7 T 01-11-2018 IPR002622 Transposase, Synechocystis PCC 6803 D3790_13050 3efe3d1f1f74fc93790c52e050e683ed 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 4.3E-30 T 01-11-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 D3790_13050 3efe3d1f1f74fc93790c52e050e683ed 238 Gene3D G3DSA:1.10.3720.10 8 220 2.0E-53 T 01-11-2018 IPR035906 MetI-like superfamily D3790_13050 3efe3d1f1f74fc93790c52e050e683ed 238 SUPERFAMILY SSF161098 14 211 1.7E-46 T 01-11-2018 IPR035906 MetI-like superfamily D3790_13050 3efe3d1f1f74fc93790c52e050e683ed 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 216 3.7E-23 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_07280 3af5e96849008a0a9a1fde94224bd3e6 194 Pfam PF03843 Outer membrane lipoprotein Slp family 22 171 1.0E-43 T 01-11-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 D3790_07280 3af5e96849008a0a9a1fde94224bd3e6 194 PIRSF PIRSF004982 7 190 1.7E-42 T 01-11-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 D3790_07280 3af5e96849008a0a9a1fde94224bd3e6 194 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 15 178 1.2E-50 T 01-11-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 D3790_07260 39f4c32677e9c27d59141f1e05ea64cc 2471 Pfam PF03538 Salmonella virulence plasmid 28.1kDa A protein 15 224 1.6E-19 T 01-11-2018 IPR018003 Insecticidal toxin complex/plasmid virulence protein D3790_12350 a930163a1c5d29c9b759223124e33ce5 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 8 154 1.5E-38 T 01-11-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 D3790_12350 a930163a1c5d29c9b759223124e33ce5 162 Pfam PF04093 rod shape-determining protein MreD 8 154 8.1E-38 T 01-11-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 D3790_12350 a930163a1c5d29c9b759223124e33ce5 162 PIRSF PIRSF018472 1 162 3.7E-51 T 01-11-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type D3790_07035 2f4c2a9feddf65fe541579373ac6cf58 31 TIGRFAM TIGR03063 srtB_target: sortase B cell surface sorting signal 11 27 2.7E-4 T 01-11-2018 IPR017502 Sortase B cell surface sorting signal D3790_07055 15888c79e44f7e80edadd81e7336a4bf 310 Pfam PF00487 Fatty acid desaturase 38 286 1.4E-29 T 01-11-2018 IPR005804 Fatty acid desaturase domain GO:0006629 D3790_15290 8b14048f8149f347163cf9b340b8a30b 365 Gene3D G3DSA:1.20.1090.10 173 362 1.1E-61 T 01-11-2018 D3790_15290 8b14048f8149f347163cf9b340b8a30b 365 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 361 70.702 T 01-11-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 D3790_15290 8b14048f8149f347163cf9b340b8a30b 365 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 355 4.1E-119 T 01-11-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 D3790_15290 8b14048f8149f347163cf9b340b8a30b 365 Gene3D G3DSA:3.40.50.1970 1 172 2.9E-64 T 01-11-2018 D3790_15290 8b14048f8149f347163cf9b340b8a30b 365 Pfam PF01761 3-dehydroquinate synthase 67 326 2.1E-105 T 01-11-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 D3790_15290 8b14048f8149f347163cf9b340b8a30b 365 SUPERFAMILY SSF56796 4 357 2.75E-111 T 01-11-2018 D3790_15290 8b14048f8149f347163cf9b340b8a30b 365 PIRSF PIRSF001455 5 361 1.6E-108 T 01-11-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 D3790_10140 f4447582c17023389ee0a2cd1581016b 164 SUPERFAMILY SSF55826 6 159 2.88E-34 T 01-11-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 D3790_10140 f4447582c17023389ee0a2cd1581016b 164 Pfam PF04073 Aminoacyl-tRNA editing domain 32 150 9.9E-25 T 01-11-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 D3790_10140 f4447582c17023389ee0a2cd1581016b 164 Gene3D G3DSA:3.90.960.10 5 159 3.8E-40 T 01-11-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 D3790_03205 de932514fab1b8a613605cdf3e5d2827 486 PIRSF PIRSF006247 2 486 2.1E-161 T 01-11-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 D3790_03205 de932514fab1b8a613605cdf3e5d2827 486 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 87 469 1.4E-107 T 01-11-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 D3790_03205 de932514fab1b8a613605cdf3e5d2827 486 Pfam PF02386 Cation transport protein 41 481 2.1E-90 T 01-11-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 D3790_08895 a87d6d7a6c76d60251caf7359e3e79e4 207 Gene3D G3DSA:3.40.1110.10 23 189 1.1E-29 T 01-11-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 D3790_08895 a87d6d7a6c76d60251caf7359e3e79e4 207 SUPERFAMILY SSF81660 68 191 1.24E-10 T 01-11-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 D3790_07940 45184cc941bfe3c9e65067e4b6d9d1a5 304 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 301 3.4E-55 T 01-11-2018 IPR010106 Recombination-promoting nuclease RpnA D3790_07940 45184cc941bfe3c9e65067e4b6d9d1a5 304 Pfam PF04754 Putative transposase, YhgA-like 9 208 1.3E-81 T 01-11-2018 IPR006842 Transposase (putative), YhgA-like D3790_04730 e6ccafa22631079ab9e661bc5b9a0794 95 SUPERFAMILY SSF52794 1 86 4.97E-19 T 01-11-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 D3790_04730 e6ccafa22631079ab9e661bc5b9a0794 95 Gene3D G3DSA:3.40.50.2300 1 89 6.9E-20 T 01-11-2018 D3790_04730 e6ccafa22631079ab9e661bc5b9a0794 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 83 3.1E-14 T 01-11-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 D3790_12155 61d2d96487c3ecf47a65df628eb54a6d 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 267 2.7E-139 T 01-11-2018 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase GO:0018817|GO:0019439 D3790_12155 61d2d96487c3ecf47a65df628eb54a6d 267 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 103 265 1.3E-7 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 D3790_12155 61d2d96487c3ecf47a65df628eb54a6d 267 SUPERFAMILY SSF56529 3 267 2.09E-77 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 D3790_12155 61d2d96487c3ecf47a65df628eb54a6d 267 Gene3D G3DSA:3.90.850.10 1 267 1.9E-83 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 D3790_17200 dfe4ed2a76183128641ab73f934c0bbc 210 Pfam PF01527 Transposase 92 141 5.0E-13 T 01-11-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D3790_17200 dfe4ed2a76183128641ab73f934c0bbc 210 SUPERFAMILY SSF48295 90 139 4.39E-9 T 01-11-2018 IPR010921 Trp repressor/replication initiator GO:0043565 D3790_07735 63ec3eff4e95f5a4c27c2f78fd23d126 52 Pfam PF10617 Protein of unknown function (DUF2474) 14 50 4.1E-19 T 01-11-2018 IPR018895 Protein of unknown function DUF2474 D3790_06000 d10b6abcfdb23425ee088d725746cfe7 184 SUPERFAMILY SSF160719 88 171 3.79E-7 T 01-11-2018 D3790_06000 d10b6abcfdb23425ee088d725746cfe7 184 Pfam PF04965 Gene 25-like lysozyme 56 158 1.1E-16 T 01-11-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD D3790_04635 ff2b20fb99cf9bea7d1299f6d838296f 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 1.7E-147 T 01-11-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 D3790_04635 ff2b20fb99cf9bea7d1299f6d838296f 285 SUPERFAMILY SSF52096 18 280 8.54E-79 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily D3790_04635 ff2b20fb99cf9bea7d1299f6d838296f 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.446 T 01-11-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 D3790_04635 ff2b20fb99cf9bea7d1299f6d838296f 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 32 279 6.9E-80 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 D3790_04635 ff2b20fb99cf9bea7d1299f6d838296f 285 Gene3D G3DSA:3.90.226.10 1 222 2.4E-86 T 01-11-2018 D3790_04635 ff2b20fb99cf9bea7d1299f6d838296f 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 D3790_04635 ff2b20fb99cf9bea7d1299f6d838296f 285 Gene3D G3DSA:1.10.12.10 223 273 9.0E-31 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal D3790_08425 9f3790e0c2c976f6436819793dd62fc0 192 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 161 5.4E-35 T 01-11-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase D3790_08425 9f3790e0c2c976f6436819793dd62fc0 192 PIRSF PIRSF030780 1 189 2.6E-69 T 01-11-2018 IPR016956 Inner membrane protein YdjM D3790_14845 c5758cc6018df599c6f7ca0d038f3a07 349 Gene3D G3DSA:3.20.20.370 35 251 1.5E-73 T 01-11-2018 D3790_14845 c5758cc6018df599c6f7ca0d038f3a07 349 Pfam PF04748 Divergent polysaccharide deacetylase 41 247 4.8E-75 T 01-11-2018 IPR006837 Divergent polysaccharide deacetylase D3790_14845 c5758cc6018df599c6f7ca0d038f3a07 349 SUPERFAMILY SSF88713 38 251 3.33E-70 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 D3790_14855 50bb0931943b38ef859d95e659f89e80 105 Gene3D G3DSA:1.10.260.40 45 103 7.1E-7 T 01-11-2018 D3790_14855 50bb0931943b38ef859d95e659f89e80 105 SUPERFAMILY SSF47413 42 102 5.01E-9 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D3790_14855 50bb0931943b38ef859d95e659f89e80 105 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 14 98 1.1E-16 T 01-11-2018 IPR014057 Uncharacterized protein HI1420 D3790_02555 4adc517042201da7169f8e3b695dce37 116 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 65 108 1.1E-7 T 01-11-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 D3790_17930 e9b475f41f3c9f34d629d23638da630b 553 Pfam PF03354 Phage Terminase 71 527 1.0E-89 T 01-11-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type D3790_17930 e9b475f41f3c9f34d629d23638da630b 553 Gene3D G3DSA:3.40.50.300 42 251 3.6E-20 T 01-11-2018 D3790_08870 548886e6805b8efdc6658446e90cdf64 333 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 65 7.2E-20 T 01-11-2018 IPR025713 Motility protein B, N-terminal domain D3790_08870 548886e6805b8efdc6658446e90cdf64 333 Gene3D G3DSA:3.30.1330.60 106 293 1.7E-55 T 01-11-2018 IPR036737 OmpA-like domain superfamily D3790_08870 548886e6805b8efdc6658446e90cdf64 333 SUPERFAMILY SSF103088 155 263 3.14E-15 T 01-11-2018 IPR036737 OmpA-like domain superfamily D3790_08870 548886e6805b8efdc6658446e90cdf64 333 Pfam PF00691 OmpA family 158 246 2.2E-9 T 01-11-2018 IPR006665 OmpA-like domain D3790_12565 03236952f870931032d2a421da41d9ff 262 Pfam PF03883 Peroxide stress protein YaaA 1 243 1.8E-90 T 01-11-2018 IPR005583 Peroxide stress protein YaaA D3790_12565 03236952f870931032d2a421da41d9ff 262 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.546 T 01-11-2018 IPR005583 Peroxide stress protein YaaA D3790_08240 40a768e4aaaa228b028caa28ad6c7c25 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 290 6.2E-22 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D3790_08240 40a768e4aaaa228b028caa28ad6c7c25 340 Pfam PF01548 Transposase 5 140 2.6E-11 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D3790_11980 99a2f07019280a7929287178a66cddc9 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 2.9E-11 T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D3790_11980 99a2f07019280a7929287178a66cddc9 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 39 58 2.9E-11 T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D3790_11980 99a2f07019280a7929287178a66cddc9 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 10 31 2.9E-11 T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D3790_11980 99a2f07019280a7929287178a66cddc9 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 417 437 2.9E-11 T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D3790_11980 99a2f07019280a7929287178a66cddc9 437 Pfam PF00209 Sodium:neurotransmitter symporter family 140 435 3.8E-33 T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D3790_11980 99a2f07019280a7929287178a66cddc9 437 Pfam PF00209 Sodium:neurotransmitter symporter family 3 121 8.2E-21 T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D3790_11980 99a2f07019280a7929287178a66cddc9 437 SUPERFAMILY SSF161070 4 437 1.07E-121 T 01-11-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 D3790_00935 f2dccf532c26f6a1d9a1f1922a12805f 219 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 11 210 1.1E-94 T 01-11-2018 IPR008517 Protein of unknown function DUF799 D3790_00935 f2dccf532c26f6a1d9a1f1922a12805f 219 Gene3D G3DSA:3.40.50.10610 23 190 3.5E-64 T 01-11-2018 D3790_13885 93f21ae5d893e4e141cb73c3908268a4 416 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 1.1E-14 T 01-11-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 D3790_13885 93f21ae5d893e4e141cb73c3908268a4 416 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 39.476 T 01-11-2018 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 D3790_02140 a685790a367b1d464430d82e87de288e 207 SMART SM01040 7 104 3.5E-27 T 01-11-2018 IPR003497 BRO N-terminal domain D3790_02140 a685790a367b1d464430d82e87de288e 207 Pfam PF02498 BRO family, N-terminal domain 25 104 3.4E-18 T 01-11-2018 IPR003497 BRO N-terminal domain D3790_19235 504873f5a042db25b7ec3f4bf1b72ecf 145 Pfam PF13551 Winged helix-turn helix 18 77 7.5E-10 T 01-11-2018 D3790_19235 504873f5a042db25b7ec3f4bf1b72ecf 145 SUPERFAMILY SSF46689 7 120 1.43E-6 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D3790_05910 b94c6bc7fb05da8eadce97723bffe295 183 Pfam PF12306 Inclusion body protein 4 178 1.3E-49 T 01-11-2018 IPR021087 Uncharacterised protein family PixA/AidA D3790_05910 b94c6bc7fb05da8eadce97723bffe295 183 Gene3D G3DSA:2.60.40.3910 1 180 1.0E-22 T 01-11-2018 IPR038712 PixA-like superfamily D3790_08040 3dc66c0efbc6bbc1d97135f8cd122232 199 SUPERFAMILY SSF52540 31 140 7.57E-13 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_08040 3dc66c0efbc6bbc1d97135f8cd122232 199 Gene3D G3DSA:3.40.50.300 25 196 1.4E-11 T 01-11-2018 D3790_08980 e7ec7a86f5540a1db985ed792c58fb6f 206 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 86 206 7.2E-27 T 01-11-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly D3790_03830 c6bba52d86d9f97185bcf1ab033c5a64 121 Gene3D G3DSA:3.10.180.10 1 115 3.7E-9 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D3790_03830 c6bba52d86d9f97185bcf1ab033c5a64 121 SUPERFAMILY SSF54593 1 112 1.42E-15 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D3790_10415 ed90b0a61754a45f8c421dd96bc1c121 164 Pfam PF04519 Polymer-forming cytoskeletal 36 132 2.9E-19 T 01-11-2018 IPR007607 Bactofilin A/B D3790_13875 75dcf53c0f52bd007e2064eae3ec79bf 475 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 452 5.8E-244 T 01-11-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 D3790_13875 75dcf53c0f52bd007e2064eae3ec79bf 475 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 460 37.606 T 01-11-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 D3790_00950 0178986b32ac67bd4a5d1e1aff4ad326 196 Gene3D G3DSA:3.30.420.470 10 185 1.5E-11 T 01-11-2018 D3790_00950 0178986b32ac67bd4a5d1e1aff4ad326 196 Pfam PF13358 DDE superfamily endonuclease 33 167 8.1E-29 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_13810 0e81ace1a74fab5f8b05c02e8ee24de8 57 Pfam PF13627 Prokaryotic lipoprotein-attachment site 9 29 2.4E-10 T 01-11-2018 IPR032831 Prokaryotic lipoprotein-attachment site D3790_00565 7aafd3036e34cdbecf7ce3a6b89f82ca 112 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 59 101 5.1E-8 T 01-11-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 D3790_05915 582d4f2bc7e0afc024465c43444bfce8 95 Pfam PF03891 Domain of unknown function (DUF333) 49 88 5.3E-11 T 01-11-2018 IPR005590 Protein of unknown function DUF333 D3790_14265 4e1a50f0a160297a89a741516bea1e47 371 SUPERFAMILY SSF53098 106 343 9.86E-5 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_14265 4e1a50f0a160297a89a741516bea1e47 371 Pfam PF01609 Transposase DDE domain 104 339 1.1E-19 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_14265 4e1a50f0a160297a89a741516bea1e47 371 Pfam PF13808 DDE_Tnp_1-associated 8 95 2.0E-33 T 01-11-2018 IPR032806 H repeat-associated protein, N-terminal D3790_04240 178d35179b78f695a59d2373ea158e15 687 SUPERFAMILY SSF54373 490 563 7.19E-5 T 01-11-2018 D3790_04240 178d35179b78f695a59d2373ea158e15 687 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 118 243 2.0E-46 T 01-11-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 D3790_04240 178d35179b78f695a59d2373ea158e15 687 Gene3D G3DSA:3.40.50.150 9 252 3.7E-107 T 01-11-2018 D3790_04240 178d35179b78f695a59d2373ea158e15 687 SUPERFAMILY SSF51905 270 679 1.1E-31 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_04240 178d35179b78f695a59d2373ea158e15 687 Gene3D G3DSA:3.30.9.10 355 584 1.6E-143 T 01-11-2018 D3790_04240 178d35179b78f695a59d2373ea158e15 687 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 674 27.586 T 01-11-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 D3790_04240 178d35179b78f695a59d2373ea158e15 687 Gene3D G3DSA:3.50.50.60 270 676 1.6E-143 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D3790_04240 178d35179b78f695a59d2373ea158e15 687 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 270 679 1.7E-156 T 01-11-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 D3790_04240 178d35179b78f695a59d2373ea158e15 687 Pfam PF01266 FAD dependent oxidoreductase 270 648 1.0E-49 T 01-11-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 D3790_01455 70671e190931a8982283a6d15da62fbd 113 Pfam PF13698 Domain of unknown function (DUF4156) 22 112 2.1E-31 T 01-11-2018 IPR025294 Protein of unknown function DUF4156 D3790_09375 1ce07961f5a03df09b687e413f8f67ad 107 Pfam PF17074 Darcynin, domain of unknown function 13 101 2.7E-10 T 01-11-2018 IPR031409 Darcynin D3790_16290 f8527997c472b51b6c175cee725653c7 74 SMART SM00899 1 72 7.4E-11 T 01-11-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 D3790_16290 f8527997c472b51b6c175cee725653c7 74 SUPERFAMILY SSF50037 6 70 3.2E-16 T 01-11-2018 IPR008988 Transcriptional repressor, C-terminal D3790_16290 f8527997c472b51b6c175cee725653c7 74 Gene3D G3DSA:2.30.30.90 1 74 3.0E-28 T 01-11-2018 IPR038157 Ferrous iron transporter, core domain D3790_16290 f8527997c472b51b6c175cee725653c7 74 Pfam PF04023 FeoA domain 8 69 4.3E-8 T 01-11-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 D3790_06365 12f7f331deca50129b320ec0a4785c3a 245 Gene3D G3DSA:3.40.50.150 25 243 1.5E-39 T 01-11-2018 D3790_06365 12f7f331deca50129b320ec0a4785c3a 245 SUPERFAMILY SSF53335 6 215 9.49E-41 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3790_06365 12f7f331deca50129b320ec0a4785c3a 245 Pfam PF13649 Methyltransferase domain 43 138 4.2E-18 T 01-11-2018 D3790_11995 85a27962e3fb3b6b417d12782215a4ef 72 SUPERFAMILY SSF55816 2 69 7.85E-14 T 01-11-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_11995 85a27962e3fb3b6b417d12782215a4ef 72 Pfam PF02872 5'-nucleotidase, C-terminal domain 2 34 5.3E-7 T 01-11-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_11995 85a27962e3fb3b6b417d12782215a4ef 72 Gene3D G3DSA:3.90.780.10 1 71 2.3E-14 T 01-11-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D3790_12940 c9a1b8134d24a742431ac5dc75fef99e 196 Gene3D G3DSA:1.20.1590.10 2 196 1.5E-64 T 01-11-2018 IPR023381 YP001051499.1-like domain superfamily D3790_12940 c9a1b8134d24a742431ac5dc75fef99e 196 Pfam PF04222 Protein of unknown function (DUF416) 5 193 1.6E-78 T 01-11-2018 IPR007338 Protein of unknown function DUF416 D3790_09685 8f00198f5b0287742b15f14f76c04465 207 Gene3D G3DSA:3.30.1460.30 7 106 3.8E-27 T 01-11-2018 D3790_09685 8f00198f5b0287742b15f14f76c04465 207 SUPERFAMILY SSF159894 11 104 3.4E-26 T 01-11-2018 D3790_09685 8f00198f5b0287742b15f14f76c04465 207 PIRSF PIRSF028788 3 206 2.9E-54 T 01-11-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type D3790_09685 8f00198f5b0287742b15f14f76c04465 207 Gene3D G3DSA:1.10.150.20 115 205 1.3E-25 T 01-11-2018 D3790_09685 8f00198f5b0287742b15f14f76c04465 207 Pfam PF04993 TfoX N-terminal domain 15 102 1.5E-26 T 01-11-2018 IPR007076 TfoX, N-terminal D3790_09685 8f00198f5b0287742b15f14f76c04465 207 Pfam PF04994 TfoX C-terminal domain 115 194 7.1E-27 T 01-11-2018 IPR007077 TfoX, C-terminal D3790_04750 cee5b5f0e841a01f23fe0e067c4ab490 485 Pfam PF00361 Proton-conducting membrane transporter 122 420 7.5E-82 T 01-11-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D3790_04750 cee5b5f0e841a01f23fe0e067c4ab490 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.636 T 01-11-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 D3790_04750 cee5b5f0e841a01f23fe0e067c4ab490 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 1.9E-133 T 01-11-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 D3790_01255 145723a52c87471a37841326025cfa6b 130 Pfam PF12835 Integrase 1 86 7.3E-33 T 01-11-2018 IPR024456 Integrase catalytic domain, putative D3790_02300 bb2983653ca3bd37d9ca8d360e215dc2 289 Pfam PF13942 YfhG lipoprotein 74 247 2.5E-77 T 01-11-2018 IPR025262 Quorum-sensing regulator protein G D3790_02300 bb2983653ca3bd37d9ca8d360e215dc2 289 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 55 242 1.0E-61 T 01-11-2018 D3790_17715 0f8a9562a6a8e564367e82fdff6f928b 131 Pfam PF07681 DoxX 8 89 1.9E-15 T 01-11-2018 IPR032808 DoxX family D3790_02710 bf1eaadebc8281d6f1a666217f1f7570 78 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 1.6E-19 T 01-11-2018 IPR007684 Zinc finger, Ogr/Delta-type D3790_01000 e54dd01f7b54fa56ce7f115d36eb5ea8 74 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 3.7E-22 T 01-11-2018 IPR007495 (Na+)-NQR maturation factor NqrM D3790_17775 d674695e814f3517d58eb25f20748701 88 Pfam PF04606 Ogr/Delta-like zinc finger 8 53 7.4E-16 T 01-11-2018 IPR007684 Zinc finger, Ogr/Delta-type D3790_06530 600c27e6cbc5d5fbaf846b2a07663fce 258 PRINTS PR00118 Beta-lactamase class A signature 186 201 5.7E-59 T 01-11-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 D3790_06530 600c27e6cbc5d5fbaf846b2a07663fce 258 PRINTS PR00118 Beta-lactamase class A signature 71 96 5.7E-59 T 01-11-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 D3790_06530 600c27e6cbc5d5fbaf846b2a07663fce 258 PRINTS PR00118 Beta-lactamase class A signature 29 46 5.7E-59 T 01-11-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 D3790_06530 600c27e6cbc5d5fbaf846b2a07663fce 258 PRINTS PR00118 Beta-lactamase class A signature 107 131 5.7E-59 T 01-11-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 D3790_06530 600c27e6cbc5d5fbaf846b2a07663fce 258 PRINTS PR00118 Beta-lactamase class A signature 133 158 5.7E-59 T 01-11-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 D3790_06530 600c27e6cbc5d5fbaf846b2a07663fce 258 PRINTS PR00118 Beta-lactamase class A signature 169 184 5.7E-59 T 01-11-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 D3790_06530 600c27e6cbc5d5fbaf846b2a07663fce 258 SUPERFAMILY SSF56601 2 248 5.63E-72 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like D3790_06530 600c27e6cbc5d5fbaf846b2a07663fce 258 Gene3D G3DSA:3.40.710.10 1 255 5.2E-71 T 01-11-2018 D3790_06530 600c27e6cbc5d5fbaf846b2a07663fce 258 Pfam PF13354 Beta-lactamase enzyme family 19 223 3.9E-39 T 01-11-2018 D3790_00415 80cf143e773a417fa974d784f56296e2 585 Pfam PF05947 Type VI secretion system, TssF 7 582 1.6E-107 T 01-11-2018 IPR010272 Type VI secretion system, TssF-like D3790_00415 80cf143e773a417fa974d784f56296e2 585 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 8 581 1.2E-78 T 01-11-2018 IPR010272 Type VI secretion system, TssF-like D3790_01930 a46681eaa991f252c529c305f0110d08 312 Gene3D G3DSA:3.20.20.60 5 307 1.8E-20 T 01-11-2018 D3790_01930 a46681eaa991f252c529c305f0110d08 312 Pfam PF15617 C-C_Bond_Lyase of the TIM-Barrel fold 6 307 1.5E-105 T 01-11-2018 IPR039480 C-C bond lyase-like D3790_01930 a46681eaa991f252c529c305f0110d08 312 SUPERFAMILY SSF51621 8 257 2.41E-30 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D3790_01930 a46681eaa991f252c529c305f0110d08 312 PIRSF PIRSF015582 4 312 4.4E-53 T 01-11-2018 IPR011206 Citrate lyase beta subunit-like D3790_09110 981290eee51b16295b0f4528683ed879 178 Pfam PF06252 Protein of unknown function (DUF1018) 19 146 9.7E-32 T 01-11-2018 IPR009363 Bacteriophage Mu, Gp16 D3790_13755 15c0e9332a7084b319147a05dcc88e50 161 Gene3D G3DSA:3.10.129.10 6 161 1.5E-50 T 01-11-2018 D3790_13755 15c0e9332a7084b319147a05dcc88e50 161 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 30 159 2.3E-17 T 01-11-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 D3790_13755 15c0e9332a7084b319147a05dcc88e50 161 Pfam PF03061 Thioesterase superfamily 63 149 2.8E-16 T 01-11-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 D3790_13755 15c0e9332a7084b319147a05dcc88e50 161 SUPERFAMILY SSF54637 17 160 7.04E-25 T 01-11-2018 IPR029069 HotDog domain superfamily D3790_01045 969169540123b5ba2228df1ee14fb517 255 SUPERFAMILY SSF56235 2 253 2.92E-46 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D3790_01045 969169540123b5ba2228df1ee14fb517 255 Pfam PF13230 Glutamine amidotransferases class-II 1 253 9.4E-108 T 01-11-2018 IPR026869 Putative glutamine amidotransferase type 2 D3790_01045 969169540123b5ba2228df1ee14fb517 255 Gene3D G3DSA:3.60.20.10 1 255 6.4E-92 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D3790_09055 e609f22cc6273b4a03020611fbf5faff 190 Pfam PF11985 Protein of unknown function (DUF3486) 7 188 1.6E-56 T 01-11-2018 IPR021874 Bacteriophage Mu, Gp27 D3790_00675 cc6dd181939055bee5145166ed2f4881 193 Pfam PF11198 Protein of unknown function (DUF2857) 9 181 1.7E-64 T 01-11-2018 IPR021364 Protein of unknown function DUF2857 D3790_19180 730ea91ad1518d79263ef68a8fc65755 717 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 486 614 1.7E-34 T 01-11-2018 IPR025299 CstA, C-terminal domain D3790_19180 730ea91ad1518d79263ef68a8fc65755 717 Pfam PF02554 Carbon starvation protein CstA 34 406 1.0E-160 T 01-11-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 D3790_07140 6fc2578c162ef08d3a17a96aaa0c4f40 340 Pfam PF01548 Transposase 5 140 5.1E-11 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D3790_07140 6fc2578c162ef08d3a17a96aaa0c4f40 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 289 5.7E-22 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D3790_07925 3064a9c6427ce3de669e00660652cb17 2391 Pfam PF12920 TcdA/TcdB pore forming domain 1008 1672 0.0 T 01-11-2018 IPR024769 TcdA/TcdB toxin, pore forming domain GO:0009405 D3790_07925 3064a9c6427ce3de669e00660652cb17 2391 Gene3D G3DSA:2.150.10.10 2180 2313 2.2E-5 T 01-11-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D3790_00440 24492c8301dc659c6b89c7167a69cdaa 504 Pfam PF07916 TraG-like protein, N-terminal region 8 479 1.1E-99 T 01-11-2018 IPR012931 TraG-like, N-terminal D3790_01695 08483f14dcf00c0e72ba3b73d85c63b7 407 Pfam PF13730 Helix-turn-helix domain 55 115 3.5E-10 T 01-11-2018 D3790_02640 979d8d4fa59ad36525c7177e40c904f2 118 Pfam PF13665 Domain of unknown function (DUF4150) 16 117 1.8E-32 T 01-11-2018 IPR025425 Domain of unknown function DUF4150 D3790_04045 979d8d4fa59ad36525c7177e40c904f2 118 Pfam PF13665 Domain of unknown function (DUF4150) 16 117 1.8E-32 T 01-11-2018 IPR025425 Domain of unknown function DUF4150 D3790_01940 b0de67fd3e02c9ff2e7da6fa0ff2c85e 384 Pfam PF15609 Phosphoribosyl transferase 38 223 9.9E-60 T 01-11-2018 D3790_01940 b0de67fd3e02c9ff2e7da6fa0ff2c85e 384 Pfam PF12500 TRSP domain C terminus to PRTase_2 277 362 5.4E-19 T 01-11-2018 IPR022537 TRSP domain D3790_01940 b0de67fd3e02c9ff2e7da6fa0ff2c85e 384 SUPERFAMILY SSF53271 32 217 6.14E-15 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like D3790_01940 b0de67fd3e02c9ff2e7da6fa0ff2c85e 384 Gene3D G3DSA:3.40.50.2020 42 223 4.9E-9 T 01-11-2018 D3790_01940 b0de67fd3e02c9ff2e7da6fa0ff2c85e 384 PIRSF PIRSF020967 7 384 7.0E-177 T 01-11-2018 IPR011214 Uncharacterised conserved protein UCP020967 D3790_18910 36f662fa0dc84129ce6243320fe3b458 549 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 545 1.4E-186 T 01-11-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 D3790_18910 36f662fa0dc84129ce6243320fe3b458 549 Pfam PF00999 Sodium/hydrogen exchanger family 8 421 8.0E-73 T 01-11-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 D3790_06500 e2c49dba9892328e28953f96e55d003e 104 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 21.405 T 01-11-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 D3790_06500 e2c49dba9892328e28953f96e55d003e 104 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 85 2.2E-19 T 01-11-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 D3790_12090 9cbb1a56987e6aeeb6c56e2fb9a0b6c5 274 Pfam PF08346 AntA/AntB antirepressor 42 128 3.2E-25 T 01-11-2018 IPR013557 AntA/AntB antirepressor D3790_08300 8cac2b712520d01fbfd713796c067dac 161 SUPERFAMILY SSF54001 40 161 1.54E-39 T 01-11-2018 IPR038765 Papain-like cysteine peptidase superfamily D3790_08300 8cac2b712520d01fbfd713796c067dac 161 Gene3D G3DSA:3.90.1720.10 40 161 7.1E-39 T 01-11-2018 D3790_08300 8cac2b712520d01fbfd713796c067dac 161 Pfam PF00877 NlpC/P60 family 56 160 4.4E-29 T 01-11-2018 IPR000064 Endopeptidase, NLPC/P60 domain D3790_10305 15cd9ca0854e95e2945be60e8f6a0abb 246 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 173 2.5E-31 T 01-11-2018 IPR002654 Glycosyl transferase, family 25 D3790_06085 d1fc05dda2f873359e51e1589910a099 293 SUPERFAMILY SSF74650 7 272 1.44E-69 T 01-11-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 D3790_06085 d1fc05dda2f873359e51e1589910a099 293 Gene3D G3DSA:2.70.98.10 1 288 9.8E-89 T 01-11-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 D3790_06085 d1fc05dda2f873359e51e1589910a099 293 Pfam PF01263 Aldose 1-epimerase 28 276 2.5E-44 T 01-11-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 D3790_06085 d1fc05dda2f873359e51e1589910a099 293 PIRSF PIRSF016020 9 290 3.1E-52 T 01-11-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 D3790_19570 dc303a8d831c4eda6cf2cb23f3f44d62 268 Gene3D G3DSA:3.60.15.10 2 267 1.2E-43 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3790_19570 dc303a8d831c4eda6cf2cb23f3f44d62 268 SUPERFAMILY SSF56281 29 252 4.72E-31 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3790_19570 dc303a8d831c4eda6cf2cb23f3f44d62 268 SMART SM00849 31 263 6.1E-12 T 01-11-2018 IPR001279 Metallo-beta-lactamase D3790_19570 dc303a8d831c4eda6cf2cb23f3f44d62 268 Pfam PF00753 Metallo-beta-lactamase superfamily 34 249 4.3E-18 T 01-11-2018 IPR001279 Metallo-beta-lactamase D3790_18645 e2204f59adda0c4d945475178b6dc5a7 274 Pfam PF08346 AntA/AntB antirepressor 46 127 1.8E-26 T 01-11-2018 IPR013557 AntA/AntB antirepressor D3790_00005 64e1b6f1979c304c12738754e1f11c37 46 SUPERFAMILY SSF56281 1 43 3.08E-5 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3790_00005 64e1b6f1979c304c12738754e1f11c37 46 Gene3D G3DSA:3.60.15.10 1 46 2.8E-10 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3790_03190 ac9e4dd89bd97e5afaa71432a0c631ce 124 TIGRFAM TIGR00494 crcB: protein CrcB 7 120 4.4E-36 T 01-11-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 D3790_03190 ac9e4dd89bd97e5afaa71432a0c631ce 124 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 18.028 T 01-11-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 D3790_03190 ac9e4dd89bd97e5afaa71432a0c631ce 124 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 116 1.6E-24 T 01-11-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 D3790_18695 6422f1955cbf5fd35ff9a5e3d93ffad9 108 Pfam PF15781 ParE-like toxin of type II bacterial toxin-antitoxin system 11 97 7.9E-34 T 01-11-2018 IPR031552 Type II bacterial toxin-antitoxin system, ParE-like toxin D3790_00420 e10396285588153921e82ca366f9752f 132 Pfam PF07511 Protein of unknown function (DUF1525) 20 127 1.6E-39 T 01-11-2018 IPR011090 Integrating conjugative element protein, PFL4709 D3790_00420 e10396285588153921e82ca366f9752f 132 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 20 128 3.2E-42 T 01-11-2018 IPR011090 Integrating conjugative element protein, PFL4709 D3790_07630 20f78f9a355bce32da2e939f5da7e287 205 Pfam PF03550 Outer membrane lipoprotein LolB 49 202 2.4E-46 T 01-11-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 D3790_07630 20f78f9a355bce32da2e939f5da7e287 205 Gene3D G3DSA:2.50.20.10 29 205 7.7E-57 T 01-11-2018 D3790_07630 20f78f9a355bce32da2e939f5da7e287 205 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 6 203 1.1E-61 T 01-11-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 D3790_07630 20f78f9a355bce32da2e939f5da7e287 205 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 4 204 27.161 T 01-11-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 D3790_07630 20f78f9a355bce32da2e939f5da7e287 205 SUPERFAMILY SSF89392 30 203 2.79E-50 T 01-11-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX D3790_16695 b871fa8c65708bfaa3c1c71a783e3002 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 102 6.4E-12 T 01-11-2018 IPR008407 Branched-chain amino acid transport, AzlD D3790_16005 803771d0ab62cac76fec2abbcbcbf892 431 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 8 419 3.6E-116 T 01-11-2018 IPR017735 Type VI secretion system, FHA domain-containing protein D3790_13475 41cc0b09d55badfe44288449270d06ad 113 SUPERFAMILY SSF110857 1 112 5.36E-33 T 01-11-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily D3790_13475 41cc0b09d55badfe44288449270d06ad 113 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 3.4E-23 T 01-11-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like D3790_13475 41cc0b09d55badfe44288449270d06ad 113 Gene3D G3DSA:3.10.490.10 1 113 1.2E-40 T 01-11-2018 D3790_00355 23901f0b0fb9cd9c840e79010eb581ef 133 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 10 130 1.6E-48 T 01-11-2018 IPR022262 Lipoprotein, putative D3790_00810 23901f0b0fb9cd9c840e79010eb581ef 133 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 10 130 1.6E-48 T 01-11-2018 IPR022262 Lipoprotein, putative D3790_02450 ff32a78e8c3c0b79af443c38c2650866 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 1.5E-55 T 01-11-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 D3790_02450 ff32a78e8c3c0b79af443c38c2650866 206 PIRSF PIRSF006170 1 206 2.7E-53 T 01-11-2018 IPR026039 Uncharacterised protein family UPF0070 D3790_00225 384581243715ee81de187293f270199b 24 Pfam PF03811 InsA N-terminal domain 2 24 6.9E-11 T 01-11-2018 IPR003220 InsA N-terminal domain GO:0006313 D3790_14815 e79bbf9e16cb299e56a1487fe07b28f0 295 PIRSF PIRSF029703 1 293 2.1E-112 T 01-11-2018 IPR009977 Mig-14 D3790_14815 e79bbf9e16cb299e56a1487fe07b28f0 295 Pfam PF07395 Mig-14 33 292 3.7E-64 T 01-11-2018 IPR009977 Mig-14 D3790_14815 e79bbf9e16cb299e56a1487fe07b28f0 295 SUPERFAMILY SSF55729 132 285 1.38E-13 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_05525 f87c3f888f0cef98bde85c81cd41e4e6 136 SUPERFAMILY SSF52833 10 133 5.39E-29 T 01-11-2018 IPR036249 Thioredoxin-like superfamily D3790_05525 f87c3f888f0cef98bde85c81cd41e4e6 136 Gene3D G3DSA:3.40.30.10 9 134 2.0E-38 T 01-11-2018 D3790_05525 f87c3f888f0cef98bde85c81cd41e4e6 136 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 10 132 3.3E-33 T 01-11-2018 IPR006504 Transcriptional regulator Spx/MgsR D3790_05525 f87c3f888f0cef98bde85c81cd41e4e6 136 Pfam PF03960 ArsC family 13 132 2.2E-12 T 01-11-2018 IPR006660 Arsenate reductase-like D3790_00285 90f144507341cfc79daa02446d2ea5af 107 Pfam PF01710 Transposase 1 103 4.3E-23 T 01-11-2018 IPR002622 Transposase, Synechocystis PCC 6803 D3790_12450 90f144507341cfc79daa02446d2ea5af 107 Pfam PF01710 Transposase 1 103 4.3E-23 T 01-11-2018 IPR002622 Transposase, Synechocystis PCC 6803 D3790_08755 4ab2181e7547a718734c087237ba2e57 379 Pfam PF01609 Transposase DDE domain 102 343 4.0E-20 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_08755 4ab2181e7547a718734c087237ba2e57 379 Pfam PF13808 DDE_Tnp_1-associated 9 94 1.7E-32 T 01-11-2018 IPR032806 H repeat-associated protein, N-terminal D3790_17555 6ef889ee663854fb95f2fe1595e79a0c 170 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 2 152 1.2E-55 T 01-11-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 D3790_17555 6ef889ee663854fb95f2fe1595e79a0c 170 Pfam PF02470 MlaD protein 39 115 2.4E-18 T 01-11-2018 IPR003399 Mce/MlaD D3790_03300 3d67e212897a4c2baf6ec41793ca09de 348 Pfam PF02562 PhoH-like protein 123 326 1.6E-93 T 01-11-2018 IPR003714 PhoH-like protein GO:0005524 D3790_03300 3d67e212897a4c2baf6ec41793ca09de 348 SUPERFAMILY SSF52540 122 303 2.95E-40 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3790_03300 3d67e212897a4c2baf6ec41793ca09de 348 Gene3D G3DSA:3.40.50.300 120 326 2.8E-73 T 01-11-2018 D3790_01075 56e7d6ac2eab4032bbee8bb6ac4c3a70 294 Gene3D G3DSA:3.60.15.10 28 261 4.6E-29 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3790_01075 56e7d6ac2eab4032bbee8bb6ac4c3a70 294 Pfam PF00753 Metallo-beta-lactamase superfamily 41 227 3.9E-9 T 01-11-2018 IPR001279 Metallo-beta-lactamase D3790_01075 56e7d6ac2eab4032bbee8bb6ac4c3a70 294 SMART SM00849 42 227 3.2E-17 T 01-11-2018 IPR001279 Metallo-beta-lactamase D3790_01075 56e7d6ac2eab4032bbee8bb6ac4c3a70 294 SUPERFAMILY SSF56281 27 251 1.12E-40 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3790_08480 15e23fea8f7ba279e1e35ceebc6067af 117 Pfam PF10709 Protein of unknown function (DUF2511) 24 110 5.5E-38 T 01-11-2018 IPR019648 Protein of unknown function DUF2511 D3790_06915 09c51cf2c5f579d0dd1b11d914ead490 77 Pfam PF01338 Bacillus thuringiensis toxin 22 69 3.6E-8 T 01-11-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 D3790_06915 09c51cf2c5f579d0dd1b11d914ead490 77 Gene3D G3DSA:3.40.198.10 26 77 1.6E-5 T 01-11-2018 IPR035918 Delta-endotoxin CytB-like superfamily D3790_08740 9e1b33f50e1a96a133dac668cb5ae623 72 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 72 - T 01-11-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 D3790_08740 9e1b33f50e1a96a133dac668cb5ae623 72 Gene3D G3DSA:3.40.50.1380 1 72 1.5E-27 T 01-11-2018 IPR036914 Methylglyoxal synthase-like domain superfamily D3790_08740 9e1b33f50e1a96a133dac668cb5ae623 72 SUPERFAMILY SSF52335 4 72 6.87E-24 T 01-11-2018 IPR036914 Methylglyoxal synthase-like domain superfamily D3790_09510 104f668e2a2ea6319d72fcbfb6f42af8 99 SUPERFAMILY SSF101498 1 89 8.11E-13 T 01-11-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily D3790_09510 104f668e2a2ea6319d72fcbfb6f42af8 99 Pfam PF04316 Anti-sigma-28 factor, FlgM 41 87 1.3E-9 T 01-11-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal D3790_09510 104f668e2a2ea6319d72fcbfb6f42af8 99 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 89 2.2E-17 T 01-11-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 D3790_05830 b4adb70e0d7603c8ec49309d5212a08f 1016 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 600 679 1.8E-25 T 01-11-2018 IPR022385 Rhs repeat-associated core GO:0097264 D3790_05830 b4adb70e0d7603c8ec49309d5212a08f 1016 Gene3D G3DSA:2.180.10.10 1 679 1.8E-244 T 01-11-2018 D3790_14585 6c86e7d2f243c7fe2fe83bb4453bf775 206 Pfam PF07305 Protein of unknown function (DUF1454) 12 200 7.1E-76 T 01-11-2018 IPR009918 Protein of unknown function DUF1454 D3790_01815 47f9845dffdb41cb04e793b29b050cce 336 Pfam PF02371 Transposase IS116/IS110/IS902 family 207 285 2.2E-23 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D3790_01815 47f9845dffdb41cb04e793b29b050cce 336 Pfam PF01548 Transposase 1 136 2.5E-12 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D3790_17705 96d4a009cf439ce7ca12679efb50b541 232 Gene3D G3DSA:2.60.120.10 12 133 1.2E-36 T 01-11-2018 IPR014710 RmlC-like jelly roll fold D3790_17705 96d4a009cf439ce7ca12679efb50b541 232 Gene3D G3DSA:2.60.120.10 134 231 1.3E-25 T 01-11-2018 IPR014710 RmlC-like jelly roll fold D3790_17705 96d4a009cf439ce7ca12679efb50b541 232 Pfam PF02678 Pirin 6 119 1.6E-20 T 01-11-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 D3790_17705 96d4a009cf439ce7ca12679efb50b541 232 SUPERFAMILY SSF51182 1 230 4.89E-41 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily D3790_17705 96d4a009cf439ce7ca12679efb50b541 232 PIRSF PIRSF006232 1 228 5.3E-26 T 01-11-2018 IPR012093 Pirin Reactome: R-HSA-8935690 D3790_04620 c094f36c8608b30abf7fb23e69041037 181 Pfam PF07437 YfaZ precursor 5 181 7.8E-56 T 01-11-2018 IPR009998 YfaZ D3790_04620 c094f36c8608b30abf7fb23e69041037 181 SUPERFAMILY SSF56935 21 181 1.01E-5 T 01-11-2018 D3790_14505 86ff35f95e4011e58724e657fef3a8c1 105 Hamap MF_00744 Met repressor [metJ]. 1 105 40.047 T 01-11-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 D3790_14505 86ff35f95e4011e58724e657fef3a8c1 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 5.5E-58 T 01-11-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 D3790_14505 86ff35f95e4011e58724e657fef3a8c1 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 5.0E-47 T 01-11-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 D3790_14505 86ff35f95e4011e58724e657fef3a8c1 105 SUPERFAMILY SSF47598 2 105 2.22E-57 T 01-11-2018 IPR010985 Ribbon-helix-helix GO:0006355 D3790_14505 86ff35f95e4011e58724e657fef3a8c1 105 Gene3D G3DSA:1.10.140.10 2 105 1.1E-62 T 01-11-2018 IPR023453 Methionine repressor MetJ domain superfamily D3790_04000 9fab50f1dba2a6b454d14ba9815a7b39 157 Pfam PF15657 HNH/Endo VII superfamily nuclease toxins 82 153 2.9E-20 T 01-11-2018 IPR028048 HNH/Endo VII superfamily nuclease toxins D3790_09580 886b3dd20f9a903d04b2d14676bb3d09 250 Pfam PF10543 ORF6N domain 13 93 9.6E-17 T 01-11-2018 IPR018873 KilA-N, DNA-binding domain D3790_08460 1b5404e4d71bf60c95b02eb6eb70a857 294 Pfam PF01435 Peptidase family M48 74 289 1.5E-38 T 01-11-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 D3790_08460 1b5404e4d71bf60c95b02eb6eb70a857 294 Hamap MF_00188 Protease HtpX [htpX]. 1 290 25.89 T 01-11-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 D3790_08460 1b5404e4d71bf60c95b02eb6eb70a857 294 Gene3D G3DSA:3.30.2010.10 64 157 3.3E-35 T 01-11-2018 D3790_19525 a484c9db54045a769861edbfad57244f 276 PRINTS PR00069 Aldo-keto reductase signature 91 109 1.8E-42 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 D3790_19525 a484c9db54045a769861edbfad57244f 276 PRINTS PR00069 Aldo-keto reductase signature 196 220 1.8E-42 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 D3790_19525 a484c9db54045a769861edbfad57244f 276 PRINTS PR00069 Aldo-keto reductase signature 37 61 1.8E-42 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 D3790_19525 a484c9db54045a769861edbfad57244f 276 PRINTS PR00069 Aldo-keto reductase signature 157 186 1.8E-42 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 D3790_19525 a484c9db54045a769861edbfad57244f 276 PRINTS PR00069 Aldo-keto reductase signature 123 140 1.8E-42 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 D3790_19525 a484c9db54045a769861edbfad57244f 276 Gene3D G3DSA:3.20.20.100 1 275 4.9E-110 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily D3790_19525 a484c9db54045a769861edbfad57244f 276 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 01-11-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 D3790_19525 a484c9db54045a769861edbfad57244f 276 SUPERFAMILY SSF51430 7 266 2.36E-81 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily D3790_19525 a484c9db54045a769861edbfad57244f 276 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 01-11-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 D3790_19525 a484c9db54045a769861edbfad57244f 276 PIRSF PIRSF000097 1 274 1.3E-87 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 D3790_19525 a484c9db54045a769861edbfad57244f 276 Pfam PF00248 Aldo/keto reductase family 18 260 5.2E-42 T 01-11-2018 IPR023210 NADP-dependent oxidoreductase domain D3790_19525 a484c9db54045a769861edbfad57244f 276 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 01-11-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 D3790_18135 5e455b1d43531f35aa36a7e53754182c 65 Gene3D G3DSA:3.30.2310.20 4 65 9.8E-20 T 01-11-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D3790_18135 5e455b1d43531f35aa36a7e53754182c 65 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 12 65 3.2E-9 T 01-11-2018 IPR007711 Toxin HigB-1 D3790_18135 5e455b1d43531f35aa36a7e53754182c 65 SUPERFAMILY SSF143011 20 65 3.4E-9 T 01-11-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D3790_11845 f89a9a0e524d6405cf89cfeb3c37db52 107 Pfam PF01710 Transposase 1 102 1.7E-20 T 01-11-2018 IPR002622 Transposase, Synechocystis PCC 6803 D3790_06645 14d39d83b2212c375966252fca88480d 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.379 T 01-11-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 D3790_06645 14d39d83b2212c375966252fca88480d 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 6.2E-90 T 01-11-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 D3790_06645 14d39d83b2212c375966252fca88480d 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.4E-61 T 01-11-2018 IPR003667 NqrDE/RnfAE GO:0016020 D3790_06645 14d39d83b2212c375966252fca88480d 193 PIRSF PIRSF006102 1 193 9.0E-61 T 01-11-2018 IPR003667 NqrDE/RnfAE GO:0016020 D3790_13170 1ddc2f41024b054090f61890a4f32f06 207 Pfam PF01810 LysE type translocator 17 204 1.9E-30 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 D3790_13170 1ddc2f41024b054090f61890a4f32f06 207 PIRSF PIRSF006324 1 206 3.0E-50 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 D3790_15010 502ccda3ca7954af50399d2095d23735 211 SUPERFAMILY SSF52317 2 205 9.63E-51 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_15010 502ccda3ca7954af50399d2095d23735 211 Gene3D G3DSA:3.40.50.880 1 210 4.3E-69 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_15010 502ccda3ca7954af50399d2095d23735 211 PIRSF PIRSF000495 1 207 4.0E-69 T 01-11-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 D3790_15010 502ccda3ca7954af50399d2095d23735 211 Pfam PF00117 Glutamine amidotransferase class-I 4 201 5.0E-21 T 01-11-2018 IPR017926 Glutamine amidotransferase D3790_15010 502ccda3ca7954af50399d2095d23735 211 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 203 2.8E-66 T 01-11-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 D3790_15010 502ccda3ca7954af50399d2095d23735 211 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 204 33.352 T 01-11-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 D3790_08330 08c090b720de1ce5012d38d6643c0428 327 Pfam PF00535 Glycosyl transferase family 2 10 170 4.9E-34 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 D3790_08330 08c090b720de1ce5012d38d6643c0428 327 SUPERFAMILY SSF53448 7 236 2.21E-41 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_08330 08c090b720de1ce5012d38d6643c0428 327 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 1 327 62.422 T 01-11-2018 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53 D3790_08330 08c090b720de1ce5012d38d6643c0428 327 Gene3D G3DSA:3.90.550.10 2 230 1.3E-42 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases D3790_09945 949fb52795c8f0615a2b077b075268db 203 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 5 201 30.661 T 01-11-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 D3790_09945 949fb52795c8f0615a2b077b075268db 203 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 203 8.0E-91 T 01-11-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 D3790_09945 949fb52795c8f0615a2b077b075268db 203 Gene3D G3DSA:2.50.20.10 22 203 1.1E-51 T 01-11-2018 D3790_09945 949fb52795c8f0615a2b077b075268db 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 191 2.0E-57 T 01-11-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like D3790_09945 949fb52795c8f0615a2b077b075268db 203 SUPERFAMILY SSF89392 23 202 5.1E-55 T 01-11-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX D3790_02330 2dc3c7a3eb82df016b390e5eb2ea87d8 411 Gene3D G3DSA:1.20.1250.20 2 211 3.0E-14 T 01-11-2018 D3790_02330 2dc3c7a3eb82df016b390e5eb2ea87d8 411 SUPERFAMILY SSF103473 6 402 2.35E-35 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_02330 2dc3c7a3eb82df016b390e5eb2ea87d8 411 PIRSF PIRSF004925 1 161 3.3E-41 T 01-11-2018 IPR026032 Probable 3-phenylpropionic acid transporter D3790_02330 2dc3c7a3eb82df016b390e5eb2ea87d8 411 PIRSF PIRSF004925 177 411 1.2E-62 T 01-11-2018 IPR026032 Probable 3-phenylpropionic acid transporter D3790_02330 2dc3c7a3eb82df016b390e5eb2ea87d8 411 Pfam PF12832 MFS_1 like family 8 390 1.2E-44 T 01-11-2018 IPR024989 Major facilitator superfamily associated domain D3790_02330 2dc3c7a3eb82df016b390e5eb2ea87d8 411 Gene3D G3DSA:1.20.1250.20 216 403 2.2E-39 T 01-11-2018 D3790_10580 65750b7c6b472d1ea6d2444d8f45e90d 429 Gene3D G3DSA:1.20.190.10 29 261 1.6E-53 T 01-11-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 D3790_10580 65750b7c6b472d1ea6d2444d8f45e90d 429 SUPERFAMILY SSF56849 38 244 2.09E-29 T 01-11-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 D3790_05345 82769aa8206e1e6f2d61456f5d037aca 51 Pfam PF13998 MgrB protein 22 51 2.7E-17 T 01-11-2018 IPR020907 PhoP/PhoQ regulator MgrB D3790_13870 8d76f45bbb7385b96afa13b9b29bfcd0 245 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 64 230 9.6E-52 T 01-11-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 D3790_13870 8d76f45bbb7385b96afa13b9b29bfcd0 245 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 245 58.537 T 01-11-2018 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 D3790_13870 8d76f45bbb7385b96afa13b9b29bfcd0 245 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 60 236 1.2E-71 T 01-11-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 D3790_10460 d1993f1608bdff2221d837b95dffd76a 252 Pfam PF02654 Cobalamin-5-phosphate synthase 10 247 1.6E-50 T 01-11-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 D3790_10460 d1993f1608bdff2221d837b95dffd76a 252 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 252 42.42 T 01-11-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 D3790_10460 d1993f1608bdff2221d837b95dffd76a 252 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 4 249 1.6E-52 T 01-11-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 D3790_11295 5123a4e93984dee2256969638b4522bd 195 Pfam PF03923 Uncharacterized lipoprotein 32 191 2.6E-53 T 01-11-2018 IPR005619 Uncharacterised protein family, YajG D3790_19450 8935fe2561bf563d6e76af929f5e9d6a 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 40.58 T 01-11-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 D3790_19450 8935fe2561bf563d6e76af929f5e9d6a 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 1.5E-126 T 01-11-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 D3790_14660 c9df970797f2721de862a5faa30007a9 173 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 9 169 2.9E-39 T 01-11-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 D3790_04170 307c6ae32e0f845fce44b040b4ec62f0 162 Pfam PF02674 Colicin V production protein 4 143 6.6E-39 T 01-11-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 D3790_10240 0fb3936acb99b117aec7a9c0b94bafd0 147 Gene3D G3DSA:3.40.630.30 1 147 4.8E-32 T 01-11-2018 D3790_10240 0fb3936acb99b117aec7a9c0b94bafd0 147 Pfam PF00583 Acetyltransferase (GNAT) family 30 136 8.9E-13 T 01-11-2018 IPR000182 GNAT domain D3790_10240 0fb3936acb99b117aec7a9c0b94bafd0 147 SUPERFAMILY SSF55729 2 142 2.78E-24 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_07725 292d58be10b87c6c8b00d3ae8848de27 449 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 436 2.5E-167 T 01-11-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 D3790_07725 292d58be10b87c6c8b00d3ae8848de27 449 PIRSF PIRSF006446 2 449 1.0E-220 T 01-11-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 D3790_10040 ef3b4ec2038fc6827885859ec1aba534 103 Pfam PF07214 Protein of unknown function (DUF1418) 9 91 1.1E-23 T 01-11-2018 IPR010815 Protein of unknown function DUF1418 D3790_06605 45aa754c244f22f03bc66c02d1b8f299 154 Pfam PF01526 Tn3 transposase DDE domain 2 134 4.1E-42 T 01-11-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 D3790_12320 ffb9ecf30c58992181bc9dfe29196659 106 Pfam PF01906 Putative heavy-metal-binding 3 105 4.0E-39 T 01-11-2018 IPR002765 Uncharacterised protein family UPF0145 D3790_12320 ffb9ecf30c58992181bc9dfe29196659 106 SUPERFAMILY SSF117782 1 105 2.75E-37 T 01-11-2018 IPR035439 UPF0145 domain superfamily D3790_12320 ffb9ecf30c58992181bc9dfe29196659 106 Gene3D G3DSA:3.30.110.70 3 106 5.4E-45 T 01-11-2018 D3790_12320 ffb9ecf30c58992181bc9dfe29196659 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.27 T 01-11-2018 IPR002765 Uncharacterised protein family UPF0145 D3790_19520 f921e6d37e8a446b2e320bd0bf9d7123 223 Pfam PF09335 SNARE associated Golgi protein 48 173 7.9E-21 T 01-11-2018 IPR032816 SNARE associated Golgi protein D3790_16475 c27fecae6bdb50ed5bae4dee20faaeda 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 3.0E-45 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D3790_16475 c27fecae6bdb50ed5bae4dee20faaeda 339 SUPERFAMILY SSF161098 89 322 2.13E-21 T 01-11-2018 IPR035906 MetI-like superfamily D3790_11210 a4aaecc29c29471794e448470dc2c96a 453 Pfam PF13535 ATP-grasp domain 158 327 6.5E-12 T 01-11-2018 D3790_11210 a4aaecc29c29471794e448470dc2c96a 453 Gene3D G3DSA:3.30.470.20 115 450 1.1E-61 T 01-11-2018 D3790_11210 a4aaecc29c29471794e448470dc2c96a 453 SUPERFAMILY SSF56059 99 351 6.06E-35 T 01-11-2018 D3790_00190 6931a6bdea581e1d81163eb7a7a73176 336 Pfam PF05947 Type VI secretion system, TssF 6 290 8.7E-42 T 01-11-2018 IPR010272 Type VI secretion system, TssF-like D3790_18600 adae20df4286ddd18cb0414f44c7fc9a 406 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 35 383 4.5E-75 T 01-11-2018 IPR006427 Phage portal protein, HK97 D3790_18600 adae20df4286ddd18cb0414f44c7fc9a 406 Pfam PF04860 Phage portal protein 43 377 2.0E-87 T 01-11-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein D3790_10785 561a0f87a6c82b92c8c72f46b8ebff5b 207 Pfam PF01810 LysE type translocator 14 201 1.1E-47 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 D3790_10785 561a0f87a6c82b92c8c72f46b8ebff5b 207 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 37.154 T 01-11-2018 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 D3790_17650 0e822bee6e99573b0b9e0b95233e26f1 217 SUPERFAMILY SSF52317 1 215 3.06E-61 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_17650 0e822bee6e99573b0b9e0b95233e26f1 217 Gene3D G3DSA:3.40.50.880 1 217 1.0E-95 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like D3790_17650 0e822bee6e99573b0b9e0b95233e26f1 217 PIRSF PIRSF006320 1 216 2.2E-102 T 01-11-2018 IPR026041 Glyoxalase ElbB D3790_00325 d4a0470674379364d584f3c7445d662e 125 Pfam PF11190 Protein of unknown function (DUF2976) 37 123 6.0E-34 T 01-11-2018 IPR021356 Integrating conjugative element protein PFL4702 D3790_00325 d4a0470674379364d584f3c7445d662e 125 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 22 124 1.2E-36 T 01-11-2018 IPR021356 Integrating conjugative element protein PFL4702 D3790_00780 d4a0470674379364d584f3c7445d662e 125 Pfam PF11190 Protein of unknown function (DUF2976) 37 123 6.0E-34 T 01-11-2018 IPR021356 Integrating conjugative element protein PFL4702 D3790_00780 d4a0470674379364d584f3c7445d662e 125 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 22 124 1.2E-36 T 01-11-2018 IPR021356 Integrating conjugative element protein PFL4702 D3790_11050 1f1075793f7eec9c85742b77ed5cbc72 132 Gene3D G3DSA:2.60.40.1720 12 132 1.2E-11 T 01-11-2018 IPR038423 Calcium-dependent cell adhesion molecule, C-terminal domain superfamily D3790_11050 1f1075793f7eec9c85742b77ed5cbc72 132 Pfam PF14564 Membrane binding 17 130 1.1E-30 T 01-11-2018 IPR029283 Calcium-dependent cell adhesion molecule 1, membrane-binding domain D3790_09730 f5e1279ec8836275d6b5557749045094 549 Pfam PF02470 MlaD protein 45 135 5.1E-9 T 01-11-2018 IPR003399 Mce/MlaD D3790_09730 f5e1279ec8836275d6b5557749045094 549 Pfam PF02470 MlaD protein 290 392 1.1E-14 T 01-11-2018 IPR003399 Mce/MlaD D3790_09730 f5e1279ec8836275d6b5557749045094 549 Pfam PF02470 MlaD protein 165 239 2.9E-8 T 01-11-2018 IPR003399 Mce/MlaD D3790_00705 d7f6f0833d3ab677f73ec81b75706fd2 154 Pfam PF12101 Protein of unknown function (DUF3577) 9 137 1.1E-56 T 01-11-2018 IPR021960 Protein of unknown function DUF3577 D3790_19295 5145a9aef9dc9464734c7e58f241a0bd 133 Pfam PF04972 BON domain 65 132 1.7E-18 T 01-11-2018 IPR007055 BON domain D3790_19295 5145a9aef9dc9464734c7e58f241a0bd 133 SMART SM00749 70 133 9.8E-7 T 01-11-2018 IPR014004 Transport-associated and nodulation domain, bacteria D3790_00430 cd94c1e5757fbfc9d993fd48b33bb471 479 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 48 471 7.3E-165 T 01-11-2018 IPR021204 Integrating conjugative element protein, PFL4711 D3790_18950 1360f39a00991cea615d53653544c825 176 Pfam PF09335 SNARE associated Golgi protein 41 164 2.7E-16 T 01-11-2018 IPR032816 SNARE associated Golgi protein D3790_11900 f3931664836edf9c1d84ee0872cbd0f2 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 5.3E-76 T 01-11-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 D3790_11900 f3931664836edf9c1d84ee0872cbd0f2 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 88.974 T 01-11-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 D3790_11900 f3931664836edf9c1d84ee0872cbd0f2 149 Pfam PF03477 ATP cone domain 50 136 2.6E-17 T 01-11-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 D3790_08650 6f63b0a65f2e2a2d8f62510f57f9ded9 158 SUPERFAMILY SSF103473 12 146 1.44E-7 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_16035 ffaf59d3887e30bab42c52894726e7d3 223 TIGRFAM TIGR03360 VI_minor_1: type VI secretion-associated protein, VC_A0118 family 42 223 5.4E-60 T 01-11-2018 IPR017738 Type VI secretion system-associated, VCA0118 D3790_16035 ffaf59d3887e30bab42c52894726e7d3 223 Pfam PF11319 Type VI secretion system VasI, EvfG, VC_A0118 44 223 4.5E-63 T 01-11-2018 IPR017738 Type VI secretion system-associated, VCA0118 D3790_19480 34576b3a1eb123be2473e20fceb0a4df 121 Pfam PF07282 Putative transposase DNA-binding domain 23 93 6.9E-25 T 01-11-2018 IPR010095 Transposase IS605, OrfB, C-terminal D3790_12515 03314b74e31a0546b64acc45c1b0214a 318 Pfam PF01548 Transposase 7 152 1.3E-17 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D3790_12515 03314b74e31a0546b64acc45c1b0214a 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 194 277 7.7E-18 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D3790_12550 4ac4d5b0e289acdac88141fe2f020b6e 423 SUPERFAMILY SSF103473 11 420 3.66E-62 T 01-11-2018 IPR036259 MFS transporter superfamily D3790_12550 4ac4d5b0e289acdac88141fe2f020b6e 423 Gene3D G3DSA:1.20.1250.20 13 421 1.6E-60 T 01-11-2018 D3790_12550 4ac4d5b0e289acdac88141fe2f020b6e 423 Pfam PF07690 Major Facilitator Superfamily 59 386 1.0E-31 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D3790_14985 1d462d9df81d0e541ca81bbf425929fc 77 SUPERFAMILY SSF53756 2 77 1.51E-6 T 01-11-2018 D3790_14985 1d462d9df81d0e541ca81bbf425929fc 77 Gene3D G3DSA:3.40.50.2000 1 61 5.9E-8 T 01-11-2018 D3790_13180 44a6d92b11b8c679a567d3ac530b439f 105 Gene3D G3DSA:3.30.2310.20 1 98 2.2E-22 T 01-11-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D3790_13180 44a6d92b11b8c679a567d3ac530b439f 105 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 94 1.0E-10 T 01-11-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family D3790_04250 24462806e62006d141e0351a23f6a499 127 Gene3D G3DSA:1.20.5.340 3 105 4.0E-8 T 01-11-2018 D3790_17905 837f570e4de31f585b221293785c55e2 406 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 36 384 2.8E-74 T 01-11-2018 IPR006427 Phage portal protein, HK97 D3790_17905 837f570e4de31f585b221293785c55e2 406 Pfam PF04860 Phage portal protein 44 378 3.3E-89 T 01-11-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein D3790_04260 b74c7b5a6eba893af206fc4f83cb14de 183 Pfam PF04315 Elongation factor P hydroxylase 12 174 9.1E-80 T 01-11-2018 IPR007411 Elongation factor P hydroxylase D3790_10385 0366f485b98563854a6cd4f9b775e297 78 Pfam PF06183 DinI-like family 17 76 9.6E-20 T 01-11-2018 IPR010391 DNA damage-inducible protein DinI-like D3790_10385 0366f485b98563854a6cd4f9b775e297 78 Gene3D G3DSA:3.30.910.10 1 78 9.4E-17 T 01-11-2018 IPR036687 DinI-like superfamily D3790_10385 0366f485b98563854a6cd4f9b775e297 78 SUPERFAMILY SSF54857 1 77 4.32E-19 T 01-11-2018 IPR036687 DinI-like superfamily D3790_18605 54042451bce36bb21bb54fc22d83e9df 182 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 18 161 1.4E-41 T 01-11-2018 IPR006433 Prohead protease D3790_18605 54042451bce36bb21bb54fc22d83e9df 182 Pfam PF04586 Caudovirus prohead serine protease 8 166 1.2E-48 T 01-11-2018 IPR006433 Prohead protease D3790_14010 7bbd218b3dc6b0cc22e71dc1a68545ab 32 Pfam PF08046 IlvGEDA operon leader peptide 1 32 3.0E-19 T 01-11-2018 IPR012567 IlvGEDA operon leader peptide GO:0009082 D3790_02485 224ac9121909363a9e5daa138d2ba785 318 Pfam PF01548 Transposase 7 152 1.0E-17 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D3790_02485 224ac9121909363a9e5daa138d2ba785 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 194 277 7.7E-18 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D3790_12775 26c3f0fe240136ccbdcbc167e3d15986 89 Pfam PF06611 Protein of unknown function (DUF1145) 1 58 1.6E-25 T 01-11-2018 IPR009525 Protein of unknown function DUF1145 D3790_17415 0bd45708564795b9cfd5ccc78968b794 308 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 37 268 8.0E-33 T 01-11-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system D3790_17415 0bd45708564795b9cfd5ccc78968b794 308 Gene3D G3DSA:3.10.450.620 26 149 1.6E-8 T 01-11-2018 D3790_10370 5c54a0719be13d1d1441276f68c234c0 178 Pfam PF03245 Bacteriophage Rz lysis protein 46 171 1.6E-18 T 01-11-2018 IPR004929 Spanin, inner membrane subunit GO:0019076|GO:0019835 D3790_05820 c0119b56ff85f0f9874d3fa97861e2ef 2538 Pfam PF03538 Salmonella virulence plasmid 28.1kDa A protein 91 223 2.2E-15 T 01-11-2018 IPR018003 Insecticidal toxin complex/plasmid virulence protein D3790_15780 08c3fc850ce95fbc53f5988496074eff 376 Gene3D G3DSA:3.40.50.12780 18 357 1.4E-21 T 01-11-2018 D3790_15780 08c3fc850ce95fbc53f5988496074eff 376 Pfam PF04443 Acyl-protein synthetase, LuxE 22 371 3.2E-24 T 01-11-2018 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723 D3790_15780 08c3fc850ce95fbc53f5988496074eff 376 PIRSF PIRSF016580 1 376 5.8E-120 T 01-11-2018 IPR016671 Acyl-protein synthetase, LuxE, bacterial GO:0008218|GO:0047474 MetaCyc: PWY-7723 D3790_15780 08c3fc850ce95fbc53f5988496074eff 376 SUPERFAMILY SSF56801 41 339 3.01E-6 T 01-11-2018 D3790_19700 790491cbb850f1946bbc88c633af0f67 347 Pfam PF09344 CT1975-like protein 5 330 7.6E-97 T 01-11-2018 IPR010148 CRISPR-associated protein, CT1975 D3790_19700 790491cbb850f1946bbc88c633af0f67 347 TIGRFAM TIGR01869 casC_Cse4: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI 3 319 4.6E-98 T 01-11-2018 IPR010148 CRISPR-associated protein, CT1975 D3790_18615 4bf1a30579aa80c5c5671fc11263d904 131 Pfam PF06836 Protein of unknown function (DUF1240) 37 131 3.8E-35 T 01-11-2018 IPR010665 Protein of unknown function DUF1240 D3790_15205 0d989288554674e7ff4127b3b7cebab0 137 Gene3D G3DSA:1.20.950.20 7 136 4.4E-38 T 01-11-2018 D3790_15205 0d989288554674e7ff4127b3b7cebab0 137 Pfam PF01292 Prokaryotic cytochrome b561 13 105 1.5E-9 T 01-11-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 D3790_15205 0d989288554674e7ff4127b3b7cebab0 137 SUPERFAMILY SSF81342 13 131 3.3E-29 T 01-11-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 D3790_15205 0d989288554674e7ff4127b3b7cebab0 137 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 20 125 1.1E-35 T 01-11-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 D3790_06875 d4c75c0dc38d7531fd395248b31ee906 115 Pfam PF05656 Protein of unknown function (DUF805) 11 114 2.1E-28 T 01-11-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 D3790_02645 046b20c73be4e7950f3d3db41b6c7b70 405 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 21 368 2.6E-94 T 01-11-2018 IPR018683 Domain of unknown function DUF2169 D3790_00165 e8c24255d8948ca38bb13bd29c635ade 230 Pfam PF15648 Restriction endonuclease fold toxin 5 113 201 3.1E-22 T 01-11-2018 IPR028904 Tox-REase-5 domain D3790_16080 3ee7d0ad6212f8820aaa46c9aa4557b7 136 Gene3D G3DSA:3.30.420.470 4 134 1.7E-17 T 01-11-2018 D3790_16080 3ee7d0ad6212f8820aaa46c9aa4557b7 136 Pfam PF13358 DDE superfamily endonuclease 3 122 3.4E-27 T 01-11-2018 IPR038717 Tc1-like transposase, DDE domain D3790_10380 1365cff082fadd8d9c0fccec87ea4ee2 67 Pfam PF05489 Phage Tail Protein X 1 57 3.3E-28 T 01-11-2018 IPR008861 Phage Tail Protein X-like D3790_10380 1365cff082fadd8d9c0fccec87ea4ee2 67 Gene3D G3DSA:3.10.350.10 1 67 2.4E-30 T 01-11-2018 IPR036779 LysM domain superfamily D3790_10325 0bb0db7d233c17f452cbf17d3f0e3357 197 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 77 197 2.1E-34 T 01-11-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly D3790_00175 d95c6eb9cf06fdb9e2f73006ef8edda6 164 Pfam PF13503 Domain of unknown function (DUF4123) 21 140 3.2E-23 T 01-11-2018 IPR025391 Domain of unknown function DUF4123 D3790_11030 7af411853c1eacdf723ee67d845a2a24 27 Pfam PF08054 Leucine operon leader peptide 1 26 4.7E-12 T 01-11-2018 IPR012570 Leucine operon leader peptide GO:0009098 D3790_08780 201966923660a4dbf690a7100fa04be9 420 Pfam PF03903 Phage T4 tail fibre 210 261 2.9E-9 T 01-11-2018 IPR005601 Tail fibre protein p36 D3790_04030 d76c83bf1ff0cd6244a7ba89599a9d10 106 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 19 69 5.4E-19 T 01-11-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 D3790_19675 f3b1788f9ddce0b37e44424d453da446 331 SUPERFAMILY SSF56935 74 317 6.87E-5 T 01-11-2018 D3790_00395 bb540877e125265c4f03e15f27ed9263 424 Pfam PF15604 Novel toxin 15 266 415 3.6E-35 T 01-11-2018 IPR028949 Novel toxin 15 D3790_07060 1610fd745e1738d577abf9693c537f1d 363 SUPERFAMILY SSF55909 13 363 1.53E-106 T 01-11-2018 D3790_07060 1610fd745e1738d577abf9693c537f1d 363 Gene3D G3DSA:3.75.10.10 12 363 3.9E-124 T 01-11-2018 D3790_12165 23acaa7a2eeeb401c45f8fa5a977d5d6 129 Gene3D G3DSA:3.30.429.10 2 126 1.6E-49 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily D3790_12165 23acaa7a2eeeb401c45f8fa5a977d5d6 129 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 123 8.5E-25 T 01-11-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 D3790_12165 23acaa7a2eeeb401c45f8fa5a977d5d6 129 SUPERFAMILY SSF55331 2 126 1.46E-43 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily D3790_09295 6bcc7c0832eb268ecdd94b9438412b53 234 PRINTS PR01003 Flagellar assembly protein FliH signature 82 100 2.2E-60 T 01-11-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 D3790_09295 6bcc7c0832eb268ecdd94b9438412b53 234 PRINTS PR01003 Flagellar assembly protein FliH signature 59 81 2.2E-60 T 01-11-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 D3790_09295 6bcc7c0832eb268ecdd94b9438412b53 234 PRINTS PR01003 Flagellar assembly protein FliH signature 139 161 2.2E-60 T 01-11-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 D3790_09295 6bcc7c0832eb268ecdd94b9438412b53 234 PRINTS PR01003 Flagellar assembly protein FliH signature 101 120 2.2E-60 T 01-11-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 D3790_09295 6bcc7c0832eb268ecdd94b9438412b53 234 PRINTS PR01003 Flagellar assembly protein FliH signature 207 232 2.2E-60 T 01-11-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 D3790_09295 6bcc7c0832eb268ecdd94b9438412b53 234 PRINTS PR01003 Flagellar assembly protein FliH signature 121 138 2.2E-60 T 01-11-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 D3790_09295 6bcc7c0832eb268ecdd94b9438412b53 234 PRINTS PR01003 Flagellar assembly protein FliH signature 162 189 2.2E-60 T 01-11-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 D3790_09295 6bcc7c0832eb268ecdd94b9438412b53 234 PRINTS PR01003 Flagellar assembly protein FliH signature 190 206 2.2E-60 T 01-11-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 D3790_09295 6bcc7c0832eb268ecdd94b9438412b53 234 Pfam PF02108 Flagellar assembly protein FliH 100 224 2.4E-39 T 01-11-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE D3790_18595 b25cf7a6226fdda130a569705051a239 98 Pfam PF05135 Phage gp6-like head-tail connector protein 6 93 4.7E-16 T 01-11-2018 IPR021146 Phage gp6-like head-tail connector protein D3790_18595 b25cf7a6226fdda130a569705051a239 98 Gene3D G3DSA:1.10.3230.30 3 96 8.6E-13 T 01-11-2018 D3790_18595 b25cf7a6226fdda130a569705051a239 98 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 7 96 6.9E-21 T 01-11-2018 IPR006450 Phage protein of unkonwn function D3790_10860 be5a12d72e6256790a16621126137646 289 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 289 2.3E-116 T 01-11-2018 IPR031347 Protein AmpE D3790_12725 03d64ee10f6682a6ced642189be4fce8 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 7.1E-63 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 D3790_03990 53d4ed62b9c750a7718d330f51fc3702 106 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 19 69 5.3E-19 T 01-11-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 D3790_18055 d2513a525b7b12218d55387392e665e6 202 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 8.1E-65 T 01-11-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA D3790_18055 d2513a525b7b12218d55387392e665e6 202 Gene3D G3DSA:3.40.50.1820 1 198 3.5E-61 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_18055 d2513a525b7b12218d55387392e665e6 202 SUPERFAMILY SSF53474 3 188 2.45E-19 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold D3790_16180 1f8ded25cbac18d5379c3aa8c957f8fb 489 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 77 216 2.7E-16 T 01-11-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like D3790_00245 8bc0f83a461e9db5346fc712ad8521ba 131 SUPERFAMILY SSF54593 6 127 2.31E-16 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D3790_00245 8bc0f83a461e9db5346fc712ad8521ba 131 Gene3D G3DSA:3.10.180.10 2 130 1.7E-43 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D3790_11450 aebd3d9b807689691d2e1b22d7e893b0 180 Gene3D G3DSA:1.20.1270.340 1 98 3.6E-30 T 01-11-2018 IPR038338 PriB/PriC superfamily D3790_11450 aebd3d9b807689691d2e1b22d7e893b0 180 Pfam PF07445 Primosomal replication protein priC 9 177 1.4E-53 T 01-11-2018 IPR010890 Primosomal replication PriB/PriC D3790_04680 f28a71a796a37a5b04296258c3337c00 198 Pfam PF13689 Domain of unknown function (DUF4154) 58 195 9.8E-29 T 01-11-2018 IPR025293 YfiR-like D3790_01730 35e8e9c4e6e91f3684931bd8d0f80b85 260 Pfam PF13503 Domain of unknown function (DUF4123) 19 141 6.5E-21 T 01-11-2018 IPR025391 Domain of unknown function DUF4123 D3790_02065 5a20ebde2b8ffacd90136cfc83129ab1 371 Pfam PF01609 Transposase DDE domain 104 339 1.1E-19 T 01-11-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D3790_02065 5a20ebde2b8ffacd90136cfc83129ab1 371 SUPERFAMILY SSF53098 106 344 8.34E-5 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily D3790_02065 5a20ebde2b8ffacd90136cfc83129ab1 371 Pfam PF13808 DDE_Tnp_1-associated 8 95 2.0E-33 T 01-11-2018 IPR032806 H repeat-associated protein, N-terminal D3790_03960 2bb07153911997288e4e0a8d3120e828 148 Pfam PF15657 HNH/Endo VII superfamily nuclease toxins 81 148 3.3E-24 T 01-11-2018 IPR028048 HNH/Endo VII superfamily nuclease toxins D3790_11525 8ff89bbfff019f498e552107af30fc3d 268 Pfam PF01963 TraB family 30 267 5.6E-38 T 01-11-2018 IPR002816 Pheromone shutdown, TraB D3790_08220 d521732dbebed07c59f048b4f1afdf09 369 Pfam PF01594 AI-2E family transporter 15 345 3.3E-50 T 01-11-2018 IPR002549 Transmembrane protein TqsA-like D3790_03385 9c58e4eef03fa954ddc946f24266cd3b 59 Pfam PF01381 Helix-turn-helix 28 57 3.4E-5 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D3790_09240 7d96cfb534fdacc3eaeff3b307fd3791 170 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 1 167 2.9E-93 T 01-11-2018 IPR022523 Flagellar regulator, FliZ D3790_09240 7d96cfb534fdacc3eaeff3b307fd3791 170 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 90 167 3.8E-7 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 D3790_18515 1b4e1055030dd39123c9756d3882ce49 131 Pfam PF16358 RcsF lipoprotein 30 128 8.1E-46 T 01-11-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 D3790_18515 1b4e1055030dd39123c9756d3882ce49 131 Gene3D G3DSA:3.30.110.70 26 131 4.7E-32 T 01-11-2018 D3790_18515 1b4e1055030dd39123c9756d3882ce49 131 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 130 30.754 T 01-11-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 D3790_05850 05b4838c4d6d6894b346536fcb402780 312 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 309 2.3E-53 T 01-11-2018 IPR010106 Recombination-promoting nuclease RpnA D3790_05850 05b4838c4d6d6894b346536fcb402780 312 Pfam PF04754 Putative transposase, YhgA-like 9 208 4.8E-81 T 01-11-2018 IPR006842 Transposase (putative), YhgA-like D3790_05085 31c23ca9a22c3e27ac435b261bb95958 71 Pfam PF10765 Protein of unknown function (DUF2591) 4 69 1.2E-8 T 01-11-2018 IPR019701 Bacteriophage P22, NinX D3790_08115 8273767a98508dc2e1520f903be18e3a 157 Pfam PF05433 Glycine zipper 2TM domain 65 104 4.9E-8 T 01-11-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 D3790_12545 79fcdbe48092edad71b297ad22d8c707 190 Pfam PF01184 GPR1/FUN34/yaaH family 3 182 1.9E-46 T 01-11-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 D3790_00155 eece60c0d5cc70048d12ac25722f288b 213 Pfam PF15648 Restriction endonuclease fold toxin 5 87 189 1.7E-29 T 01-11-2018 IPR028904 Tox-REase-5 domain D3790_16195 173b47f6c91df8f49a38742089d634f6 110 SUPERFAMILY SSF143120 30 95 3.53E-8 T 01-11-2018 IPR036165 YefM-like superfamily D3790_19265 1c0820fd57cac6afc35099907dcf5c06 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 77 8.8E-23 T 01-11-2018 IPR025161 Putative transposase IS4/IS5 family D3790_19265 1c0820fd57cac6afc35099907dcf5c06 253 Pfam PF13586 Transposase DDE domain 163 248 2.5E-18 T 01-11-2018 IPR025668 Transposase DDE domain D3790_10160 dfe824b52a579c319a287d6e580a8eda 622 Pfam PF05170 AsmA family 273 516 4.3E-27 T 01-11-2018 IPR007844 AsmA D3790_10160 dfe824b52a579c319a287d6e580a8eda 622 Pfam PF05170 AsmA family 1 238 1.9E-20 T 01-11-2018 IPR007844 AsmA D3790_18700 adfbfee3c5519063aea38bad27019bd2 75 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 3 63 1.2E-19 T 01-11-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system D3790_08970 d091a3852f995e2239d126328f9d53b8 169 Pfam PF10777 Inner membrane protein YlaC 1 153 6.9E-72 T 01-11-2018 IPR019713 Inner membrane protein YlaC D3790_00160 7a86d130a9a06f6ff4e4764be5186d59 232 Pfam PF15579 Immunity protein 52 147 222 1.9E-8 T 01-11-2018 IPR028969 Immunity protein 52 D3790_11190 8a8ba459fd9a8c01c4bffd0e7c6a45e0 299 SUPERFAMILY SSF63829 3 276 3.79E-5 T 01-11-2018 D3790_09165 f3bcf6d3156211c14ea4ed0be709e6c5 116 Pfam PF11985 Protein of unknown function (DUF3486) 3 59 1.6E-8 T 01-11-2018 IPR021874 Bacteriophage Mu, Gp27 D3790_11860 a09081291e9b63f1b5c6a657667a0762 242 Pfam PF06149 Protein of unknown function (DUF969) 7 224 5.1E-89 T 01-11-2018 IPR010374 Protein of unknown function DUF969 D3790_03900 0f0108d19546af5f037289e8447d472a 236 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 21 232 3.9E-61 T 01-11-2018 IPR006214 Bax inhibitor 1-related D3790_14605 1cbc781400aa0d2ef0138c00968f6ac5 299 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 6 250 2.6E-38 T 01-11-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system D3790_04190 45d9e4f79b2bd801a9fecae2789129d4 229 Pfam PF09335 SNARE associated Golgi protein 56 184 1.3E-26 T 01-11-2018 IPR032816 SNARE associated Golgi protein D3790_15760 c76d2e7a7185dd4a20249ed56e03d47a 496 Pfam PF01384 Phosphate transporter family 30 485 1.3E-86 T 01-11-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 D3790_04255 4be469662d488f8b9bc4b0f91d17d2b2 91 Pfam PF08891 YfcL protein 4 85 1.7E-35 T 01-11-2018 IPR014987 Uncharacterised protein family YfcL D3790_10920 54a2e8f59dcdb98716b486740e1fffef 178 Pfam PF05258 Protein of unknown function (DUF721) 27 98 3.3E-12 T 01-11-2018 IPR007922 Protein of unknown function DUF721/UPF0232 D3790_11175 ac43fd2f832db2e587f09e3d930bb17a 55 Pfam PF05717 IS66 Orf2 like protein 9 51 3.8E-14 T 01-11-2018 IPR008878 Transposase IS66, Orf2 D3790_15200 e1bde3a866bf0570d9dfa1e374ac34ed 92 Pfam PF07362 Post-segregation antitoxin CcdA 22 92 5.9E-25 T 01-11-2018 IPR009956 Post-segregation antitoxin CcdA D3790_11115 d5e592fa4267576d52377d33988c6a21 306 Pfam PF03406 Phage tail fibre repeat 45 86 5.5E-18 T 01-11-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 D3790_06670 f6b8d9fdefc020b27949c428b4cab277 519 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 482 2.8E-124 T 01-11-2018 IPR010352 Protein of unknown function DUF945 D3790_11515 da62ed6e6edc2a5aacf023f2b497850c 139 Gene3D G3DSA:3.40.630.30 1 135 8.9E-21 T 01-11-2018 D3790_06805 d34043ba58684166c340328d416f8772 107 Pfam PF01710 Transposase 1 103 3.0E-22 T 01-11-2018 IPR002622 Transposase, Synechocystis PCC 6803 D3790_05775 b6abda0ceb79c95460a68568c54f31f7 242 Pfam PF10554 Ash protein family 71 174 3.7E-11 T 01-11-2018 IPR018880 Bacteriophage P4, Ash protein D3790_09835 27735fe56821423a05312c70fbbd181e 269 Pfam PF02698 DUF218 domain 87 247 2.3E-23 T 01-11-2018 IPR003848 Domain of unknown function DUF218 D3790_18640 416b0311dc32e954d630d7c4f3f7ddbb 66 Pfam PF13132 Domain of unknown function (DUF3950) 21 53 2.1E-8 T 01-11-2018 IPR025030 Domain of unknown function DUF3950 D3790_04715 018c6a89003df8a886303ce041f3d75b 91 Pfam PF05488 PAAR motif 9 78 1.3E-9 T 01-11-2018 IPR008727 PAAR motif D3790_18895 a9e412d77495ee1f7e5d74bafab034a1 170 Pfam PF13673 Acetyltransferase (GNAT) domain 87 147 3.1E-7 T 01-11-2018 IPR000182 GNAT domain D3790_18895 a9e412d77495ee1f7e5d74bafab034a1 170 SUPERFAMILY SSF55729 33 152 1.06E-11 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase D3790_18895 a9e412d77495ee1f7e5d74bafab034a1 170 Gene3D G3DSA:3.40.630.30 1 159 3.2E-44 T 01-11-2018 D3790_16015 4c066c4ae7d90a4778a255f027b63eab 450 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 445 2.7E-154 T 01-11-2018 IPR010263 Type VI secretion protein, VC_A0114 D3790_16015 4c066c4ae7d90a4778a255f027b63eab 450 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 446 1.6E-160 T 01-11-2018 IPR010263 Type VI secretion protein, VC_A0114 D3790_07550 184d444349b6abcd7b45cd3aab91ed87 399 Pfam PF03406 Phage tail fibre repeat 44 85 2.9E-15 T 01-11-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 D3790_13165 65fae549ab672a25a7e87e7466f8c43b 173 SUPERFAMILY SSF53686 2 166 3.72E-19 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D3790_03995 43b6700a661aa8a10e3cb9737aca1fac 129 Pfam PF15594 Immunity protein 50 10 123 2.6E-11 T 01-11-2018 IPR028957 Immunity protein 50 D3790_10340 b2c7398b3ba7d568ad5aebe820bb744c 178 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 43 176 6.5E-36 T 01-11-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly D3790_05690 a4922dc436fff65bd6bd53ac355fbc5b 74 SUPERFAMILY SSF54427 15 72 4.67E-7 T 01-11-2018 IPR032710 NTF2-like domain superfamily D3790_00560 6c32277256691317ce3e741723756a28 109 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 19 68 2.0E-15 T 01-11-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 D3790_14630 34e227ed224f010c92bf5e0efaf0a44a 274 Pfam PF02498 BRO family, N-terminal domain 11 101 1.5E-6 T 01-11-2018 IPR003497 BRO N-terminal domain D3790_07650 e0b56266567b7937606fb91683553837 136 Pfam PF10762 Protein of unknown function (DUF2583) 46 133 2.7E-41 T 01-11-2018 IPR019698 Protein of unknown function DUF2583 D3790_10000 c09c0ee1d57a970139d3a8781686abc5 106 Pfam PF11398 Protein of unknown function (DUF2813) 2 78 1.6E-21 T 01-11-2018 IPR022602 Protein of unknown function DUF2813 D3790_16690 0587548b75698dec29b16d3e41332bd4 220 Pfam PF03591 AzlC protein 20 155 2.0E-30 T 01-11-2018 IPR011606 Branched-chain amino acid transport, permease D3790_15340 55d0f6386eb6627654e5388ea225adc1 103 Pfam PF04341 Protein of unknown function, DUF485 11 98 1.5E-33 T 01-11-2018 IPR007436 Protein of unknown function DUF485 D3790_15735 5e5ed89916307fc25e96fc7b5e3e2a6d 103 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 22 93 5.7E-23 T 01-11-2018 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 D3790_09355 3a8ffe6a3ab51ae5d6439d8872500eaa 360 Pfam PF00487 Fatty acid desaturase 56 307 3.5E-28 T 01-11-2018 IPR005804 Fatty acid desaturase domain GO:0006629 D3790_06050 009754e3e7858b0723e22661a9bb6307 130 Pfam PF13665 Domain of unknown function (DUF4150) 9 115 4.2E-37 T 01-11-2018 IPR025425 Domain of unknown function DUF4150 D3790_10125 d535bc6cf7283089cddfd092a88161d0 334 Pfam PF03773 Predicted permease 5 329 3.9E-55 T 01-11-2018 IPR005524 Predicted permease DUF318 D3790_13760 d91c88da68909a5232eed9a9d4149c58 52 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 4 41 9.1E-9 T 01-11-2018 IPR022385 Rhs repeat-associated core GO:0097264