locus-tag class description XPG1_0001 PF00308 Bacterial dnaA protein XPG1_0001 PF08299 Bacterial dnaA protein helix-turn-helix XPG1_0001 PF11638 DnaA N-terminal domain XPG1_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain XPG1_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain XPG1_0002 PF02767 DNA polymerase III beta subunit, central domain XPG1_0003 PF02463 RecF/RecN/SMC N terminal domain XPG1_0004 PF00986 DNA gyrase B subunit, carboxyl terminus XPG1_0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XPG1_0004 PF01751 Toprim domain XPG1_0004 PF18053 DNA gyrase B subunit insert domain XPG1_0004 PF00204 DNA gyrase B XPG1_0005 PF01118 Semialdehyde dehydrogenase, NAD binding domain XPG1_0005 PF02774 Semialdehyde dehydrogenase, dimerisation domain XPG1_0008 PF00743 Flavin-binding monooxygenase-like XPG1_0009 PF08774 VRR-NUC domain XPG1_0009 PF04851 Type III restriction enzyme, res subunit XPG1_0010 PF18273 Type III R-M EcoP15I C-terminal domain XPG1_0010 PF01555 DNA methylase XPG1_0012 PF01380 SIS domain XPG1_0013 PF00132 Bacterial transferase hexapeptide (six repeats) XPG1_0013 PF12804 MobA-like NTP transferase domain XPG1_0014 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain XPG1_0014 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain XPG1_0015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XPG1_0015 PF02874 ATP synthase alpha/beta family, beta-barrel domain XPG1_0016 PF00231 ATP synthase XPG1_0017 PF02874 ATP synthase alpha/beta family, beta-barrel domain XPG1_0017 PF00306 ATP synthase alpha/beta chain, C terminal domain XPG1_0017 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XPG1_0018 PF00213 ATP synthase delta (OSCP) subunit XPG1_0019 PF00430 ATP synthase B/B' CF(0) XPG1_0020 PF00137 ATP synthase subunit C XPG1_0021 PF00119 ATP synthase A chain XPG1_0022 PF03899 ATP synthase I chain XPG1_0023 PF02527 rRNA small subunit methyltransferase G XPG1_0024 PF01134 Glucose inhibited division protein A XPG1_0024 PF13932 GidA associated domain XPG1_0025 PF00258 Flavodoxin XPG1_0026 PF01037 Lrp/AsnC ligand binding domain XPG1_0027 PF03590 Aspartate-ammonia ligase XPG1_0028 PF05762 VWA domain containing CoxE-like protein XPG1_0029 PF07728 AAA domain (dynein-related subfamily) XPG1_0029 PF12592 Protein of unknown function (DUF3763) XPG1_0029 PF17868 AAA lid domain XPG1_0030 PF00294 pfkB family carbohydrate kinase XPG1_0031 PF07690 Major Facilitator Superfamily XPG1_0037 PF00474 Sodium:solute symporter family XPG1_0038 PF04341 Protein of unknown function, DUF485 XPG1_0039 PF00501 AMP-binding enzyme XPG1_0039 PF16177 Acetyl-coenzyme A synthetase N-terminus XPG1_0039 PF13193 AMP-binding enzyme C-terminal domain XPG1_0040 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XPG1_0040 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XPG1_0041 PF03475 3-alpha domain XPG1_0041 PF03473 MOSC domain XPG1_0042 PF00579 tRNA synthetases class I (W and Y) XPG1_0043 PF13419 Haloacid dehalogenase-like hydrolase XPG1_0044 PF00834 Ribulose-phosphate 3 epimerase family XPG1_0045 PF02086 D12 class N6 adenine-specific DNA methyltransferase XPG1_0046 PF05036 Sporulation related domain XPG1_0047 PF01761 3-dehydroquinate synthase XPG1_0048 PF01202 Shikimate kinase XPG1_0050 PF00263 Bacterial type II and III secretion system protein XPG1_0050 PF03958 Bacterial type II/III secretion system short domain XPG1_0054 PF17092 Penicillin-binding protein OB-like domain XPG1_0054 PF00912 Transglycosylase XPG1_0054 PF00905 Penicillin binding protein transpeptidase domain XPG1_0055 PF00293 NUDIX domain XPG1_0056 PF07095 Intracellular growth attenuator protein IgaA XPG1_0057 PF01479 S4 domain XPG1_0058 PF01430 Hsp33 protein XPG1_0059 PF01293 Phosphoenolpyruvate carboxykinase XPG1_0062 PF03466 LysR substrate binding domain XPG1_0062 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_0063 PF07690 Major Facilitator Superfamily XPG1_0066 PF00501 AMP-binding enzyme XPG1_0066 PF14535 AMP-binding enzyme C-terminal domain XPG1_0068 PF00248 Aldo/keto reductase family XPG1_0069 PF00108 Thiolase, N-terminal domain XPG1_0069 PF02803 Thiolase, C-terminal domain XPG1_0071 PF07690 Major Facilitator Superfamily XPG1_0072 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_0072 PF03466 LysR substrate binding domain XPG1_0074 PF00873 AcrB/AcrD/AcrF family XPG1_0077 PF00376 MerR family regulatory protein XPG1_0077 PF09278 MerR, DNA binding XPG1_0078 PF07690 Major Facilitator Superfamily XPG1_0079 PF02796 Helix-turn-helix domain of resolvase XPG1_0079 PF00239 Resolvase, N terminal domain XPG1_0081 PF05638 Type VI secretion system effector, Hcp XPG1_0088 PF01432 Peptidase family M3 XPG1_0089 PF04445 Putative SAM-dependent methyltransferase XPG1_0090 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XPG1_0090 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain XPG1_0093 PF00582 Universal stress protein family XPG1_0094 PF01384 Phosphate transporter family XPG1_0096 PF07690 Major Facilitator Superfamily XPG1_0097 PF07690 Major Facilitator Superfamily XPG1_0098 PF00440 Bacterial regulatory proteins, tetR family XPG1_0099 PF01548 Transposase XPG1_0099 PF02371 Transposase IS116/IS110/IS902 family XPG1_0103 PF07690 Major Facilitator Superfamily XPG1_0106 PF03400 IS1 transposase XPG1_0107 PF00440 Bacterial regulatory proteins, tetR family XPG1_0109 PF02566 OsmC-like protein XPG1_0111 PF01548 Transposase XPG1_0111 PF02371 Transposase IS116/IS110/IS902 family XPG1_0112 PF07338 Protein of unknown function (DUF1471) XPG1_0114 PF00440 Bacterial regulatory proteins, tetR family XPG1_0116 PF00128 Alpha amylase, catalytic domain XPG1_0116 PF11941 Domain of unknown function (DUF3459) XPG1_0117 PF00367 phosphotransferase system, EIIB XPG1_0117 PF02378 Phosphotransferase system, EIIC XPG1_0118 PF00155 Aminotransferase class I and II XPG1_0119 PF16901 C-terminal domain of alpha-glycerophosphate oxidase XPG1_0119 PF01266 FAD dependent oxidoreductase XPG1_0120 PF00455 DeoR C terminal sensor domain XPG1_0120 PF08220 DeoR-like helix-turn-helix domain XPG1_0121 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease XPG1_0121 PF01694 Rhomboid family XPG1_0122 PF00581 Rhodanese-like domain XPG1_0123 PF01106 NifU-like domain XPG1_0123 PF01521 Iron-sulphur cluster biosynthesis XPG1_0124 PF00156 Phosphoribosyl transferase domain XPG1_0125 PF00561 alpha/beta hydrolase fold XPG1_0127 PF07690 Major Facilitator Superfamily XPG1_0129 PF03400 IS1 transposase XPG1_0134 PF03400 IS1 transposase XPG1_0138 PF09012 FeoC like transcriptional regulator XPG1_0139 PF07670 Nucleoside recognition XPG1_0139 PF07664 Ferrous iron transport protein B C terminus XPG1_0139 PF02421 Ferrous iron transport protein B XPG1_0139 PF17910 FeoB cytosolic helical domain XPG1_0140 PF04023 FeoA domain XPG1_0144 PF16921 Tex protein YqgF-like domain XPG1_0144 PF17674 HHH domain XPG1_0144 PF09371 Tex-like protein N-terminal domain XPG1_0144 PF00575 S1 RNA binding domain XPG1_0145 PF01272 Transcription elongation factor, GreA/GreB, C-term XPG1_0145 PF03449 Transcription elongation factor, N-terminal XPG1_0146 PF00072 Response regulator receiver domain XPG1_0146 PF00486 Transcriptional regulatory protein, C terminal XPG1_0147 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XPG1_0147 PF00672 HAMP domain XPG1_0147 PF00512 His Kinase A (phospho-acceptor) domain XPG1_0148 PF12849 PBP superfamily domain XPG1_0149 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_0150 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_0151 PF00005 ABC transporter XPG1_0152 PF01895 PhoU domain XPG1_0153 PF00497 Bacterial extracellular solute-binding proteins, family 3 XPG1_0154 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_0155 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_0156 PF00860 Permease family XPG1_0158 PF04220 Der GTPase activator (YihI) XPG1_0159 PF04055 Radical SAM superfamily XPG1_0159 PF06969 HemN C-terminal domain XPG1_0160 PF00158 Sigma-54 interaction domain XPG1_0160 PF02954 Bacterial regulatory protein, Fis family XPG1_0160 PF00072 Response regulator receiver domain XPG1_0161 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XPG1_0161 PF00512 His Kinase A (phospho-acceptor) domain XPG1_0162 PF00120 Glutamine synthetase, catalytic domain XPG1_0162 PF03951 Glutamine synthetase, beta-Grasp domain XPG1_0181 PF01476 LysM domain XPG1_0181 PF02369 Bacterial Ig-like domain (group 1) XPG1_0181 PF11924 Inverse autotransporter, beta-domain XPG1_0181 PF07979 Intimin C-type lectin domain XPG1_0189 PF13419 Haloacid dehalogenase-like hydrolase XPG1_0190 PF02580 D-Tyr-tRNA(Tyr) deacylase XPG1_0191 PF09500 Putative thioesterase (yiiD_Cterm) XPG1_0191 PF00583 Acetyltransferase (GNAT) family XPG1_0192 PF05170 AsmA family XPG1_0193 PF00860 Permease family XPG1_0194 PF03616 Sodium/glutamate symporter XPG1_0195 PF00270 DEAD/DEAH box helicase XPG1_0195 PF00271 Helicase conserved C-terminal domain XPG1_0195 PF17191 RecG wedge domain XPG1_0196 PF13291 ACT domain XPG1_0196 PF04607 Region found in RelA / SpoT proteins XPG1_0196 PF02824 TGS domain XPG1_0197 PF01192 RNA polymerase Rpb6 XPG1_0198 PF00625 Guanylate kinase XPG1_0199 PF01653 NAD-dependent DNA ligase adenylation domain XPG1_0199 PF03120 NAD-dependent DNA ligase OB-fold domain XPG1_0200 PF03458 UPF0126 domain XPG1_0201 PF12566 Protein of unknown function (DUF3748) XPG1_0201 PF07676 WD40-like Beta Propeller Repeat XPG1_0202 PF07119 Protein of unknown function (DUF1375) XPG1_0203 PF00155 Aminotransferase class I and II XPG1_0204 PF03352 Methyladenine glycosylase XPG1_0205 PF02091 Glycyl-tRNA synthetase alpha subunit XPG1_0206 PF05746 DALR anticodon binding domain XPG1_0206 PF02092 Glycyl-tRNA synthetase beta subunit XPG1_0207 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XPG1_0208 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_0209 PF12911 N-terminal TM domain of oligopeptide transport permease C XPG1_0209 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_0210 PF00005 ABC transporter XPG1_0210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XPG1_0211 PF00005 ABC transporter XPG1_0211 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XPG1_0212 PF17154 Gammaproteobacterial periplasmic sensor domain XPG1_0212 PF00990 Diguanylate cyclase, GGDEF domain XPG1_0212 PF00563 EAL domain XPG1_0212 PF00672 HAMP domain XPG1_0213 PF05193 Peptidase M16 inactive domain XPG1_0213 PF00675 Insulinase (Peptidase family M16) XPG1_0217 PF01361 Tautomerase enzyme XPG1_0218 PF03631 Virulence factor BrkB XPG1_0219 PF05860 haemagglutination activity domain XPG1_0219 PF13332 Hemagglutinin repeat XPG1_0220 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB XPG1_0220 PF08479 POTRA domain, ShlB-type XPG1_0220 PF17287 POTRA domain XPG1_0223 PF05638 Type VI secretion system effector, Hcp XPG1_0234 PF00004 ATPase family associated with various cellular activities (AAA) XPG1_0234 PF07724 AAA domain (Cdc48 subfamily) XPG1_0234 PF17871 AAA lid domain XPG1_0234 PF10431 C-terminal, D2-small domain, of ClpB protein XPG1_0240 PF04717 Type VI secretion system, phage-baseplate injector XPG1_0243 PF03527 RHS protein XPG1_0243 PF05593 RHS Repeat XPG1_0246 PF01381 Helix-turn-helix XPG1_0246 PF00717 Peptidase S24-like XPG1_0247 PF10410 DnaB-helicase binding domain of primase XPG1_0247 PF01807 CHC2 zinc finger XPG1_0247 PF08275 DNA primase catalytic core, N-terminal domain XPG1_0248 PF00589 Phage integrase family XPG1_0248 PF13495 Phage integrase, N-terminal SAM-like domain XPG1_0250 PF05593 RHS Repeat XPG1_0250 PF03527 RHS protein XPG1_0252 PF13817 IS66 C-terminal element XPG1_0252 PF03050 Transposase IS66 family XPG1_0252 PF13007 Transposase C of IS166 homeodomain XPG1_0252 PF13005 zinc-finger binding domain of transposase IS66 XPG1_0255 PF13276 HTH-like domain XPG1_0255 PF00665 Integrase core domain XPG1_0255 PF13333 Integrase core domain XPG1_0256 PF13610 DDE domain XPG1_0263 PF07963 Prokaryotic N-terminal methylation motif XPG1_0266 PF17946 RecC C-terminal domain XPG1_0267 PF00675 Insulinase (Peptidase family M16) XPG1_0267 PF05193 Peptidase M16 inactive domain XPG1_0267 PF16187 Middle or third domain of peptidase_M16 XPG1_0268 PF12705 PD-(D/E)XK nuclease superfamily XPG1_0268 PF00580 UvrD/REP helicase N-terminal domain XPG1_0268 PF13361 UvrD-like helicase C-terminal domain XPG1_0270 PF13538 UvrD-like helicase C-terminal domain XPG1_0271 PF00583 Acetyltransferase (GNAT) family XPG1_0271 PF00696 Amino acid kinase family XPG1_0273 PF01520 N-acetylmuramoyl-L-alanine amidase XPG1_0273 PF11741 AMIN domain XPG1_0275 PF06725 3D domain XPG1_0275 PF03562 MltA specific insert domain XPG1_0276 PF00899 ThiF family XPG1_0277 PF02657 Fe-S metabolism associated domain XPG1_0278 PF00266 Aminotransferase class-V XPG1_0281 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_0281 PF03466 LysR substrate binding domain XPG1_0282 PF04241 Protein of unknown function (DUF423) XPG1_0283 PF01728 FtsJ-like methyltransferase XPG1_0283 PF18125 RlmM ferredoxin-like domain XPG1_0284 PF02779 Transketolase, pyrimidine binding domain XPG1_0284 PF02780 Transketolase, C-terminal domain XPG1_0284 PF00456 Transketolase, thiamine diphosphate binding domain XPG1_0286 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XPG1_0286 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XPG1_0287 PF00162 Phosphoglycerate kinase XPG1_0288 PF01116 Fructose-bisphosphate aldolase class-II XPG1_0289 PF00854 POT family XPG1_0291 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain XPG1_0291 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain XPG1_0292 PF00589 Phage integrase family XPG1_0299 PF00436 Single-strand binding protein family XPG1_0301 PF06630 Enterobacterial exodeoxyribonuclease VIII XPG1_0301 PF12684 PDDEXK-like domain of unknown function (DUF3799) XPG1_0309 PF00717 Peptidase S24-like XPG1_0309 PF01381 Helix-turn-helix XPG1_0314 PF03796 DnaB-like helicase C terminal domain XPG1_0314 PF00772 DnaB-like helicase N terminal domain XPG1_0319 PF00149 Calcineurin-like phosphoesterase XPG1_0323 PF01555 DNA methylase XPG1_0323 PF18755 Restriction Enzyme Adenine Methylase Associated XPG1_0324 PF01381 Helix-turn-helix XPG1_0333 PF03592 Terminase small subunit XPG1_0333 PF10668 Phage terminase small subunit XPG1_0368 PF02796 Helix-turn-helix domain of resolvase XPG1_0368 PF00239 Resolvase, N terminal domain XPG1_0375 PF00133 tRNA synthetases class I (I, L, M and V) XPG1_0375 PF08264 Anticodon-binding domain of tRNA XPG1_0375 PF10458 Valyl tRNA synthetase tRNA binding arm XPG1_0376 PF04364 DNA polymerase III chi subunit, HolC XPG1_0377 PF02789 Cytosol aminopeptidase family, N-terminal domain XPG1_0377 PF00883 Cytosol aminopeptidase family, catalytic domain XPG1_0378 PF03739 Lipopolysaccharide export system permease LptF/LptG XPG1_0379 PF03739 Lipopolysaccharide export system permease LptF/LptG XPG1_0380 PF00144 Beta-lactamase XPG1_0385 PF18273 Type III R-M EcoP15I C-terminal domain XPG1_0385 PF01555 DNA methylase XPG1_0386 PF08774 VRR-NUC domain XPG1_0386 PF04851 Type III restriction enzyme, res subunit XPG1_0387 PF03400 IS1 transposase XPG1_0388 PF03811 InsA N-terminal domain XPG1_0388 PF12759 InsA C-terminal domain XPG1_0395 PF13592 Winged helix-turn helix XPG1_0395 PF13358 DDE superfamily endonuclease XPG1_0396 PF07690 Major Facilitator Superfamily XPG1_0398 PF03466 LysR substrate binding domain XPG1_0398 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_0411 PF04471 Restriction endonuclease XPG1_0411 PF14338 Mrr N-terminal domain XPG1_0414 PF00384 Molybdopterin oxidoreductase XPG1_0415 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XPG1_0415 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XPG1_0417 PF13476 AAA domain XPG1_0418 PF12320 Type 5 capsule protein repressor C-terminal domain XPG1_0418 PF00149 Calcineurin-like phosphoesterase XPG1_0419 PF00486 Transcriptional regulatory protein, C terminal XPG1_0419 PF00072 Response regulator receiver domain XPG1_0420 PF11808 Phosphate regulon sensor protein PhoR XPG1_0420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XPG1_0420 PF00512 His Kinase A (phospho-acceptor) domain XPG1_0420 PF00989 PAS fold XPG1_0421 PF05525 Branched-chain amino acid transport protein XPG1_0423 PF00578 AhpC/TSA family XPG1_0423 PF10417 C-terminal domain of 1-Cys peroxiredoxin XPG1_0424 PF04336 Acyl carrier protein phosphodiesterase XPG1_0425 PF02547 Queuosine biosynthesis protein XPG1_0426 PF01702 Queuine tRNA-ribosyltransferase XPG1_0427 PF02699 Preprotein translocase subunit XPG1_0428 PF02355 Protein export membrane protein XPG1_0428 PF07549 SecD/SecF GG Motif XPG1_0428 PF13721 SecD export protein N-terminal TM region XPG1_0429 PF02355 Protein export membrane protein XPG1_0429 PF07549 SecD/SecF GG Motif XPG1_0430 PF03477 ATP cone domain XPG1_0431 PF01872 RibD C-terminal domain XPG1_0431 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XPG1_0432 PF00885 6,7-dimethyl-8-ribityllumazine synthase XPG1_0433 PF01029 NusB family XPG1_0434 PF00586 AIR synthase related protein, N-terminal domain XPG1_0434 PF02769 AIR synthase related protein, C-terminal domain XPG1_0435 PF04608 Phosphatidylglycerophosphatase A XPG1_0441 PF00155 Aminotransferase class I and II XPG1_0442 PF03553 Na+/H+ antiporter family XPG1_0443 PF00356 Bacterial regulatory proteins, lacI family XPG1_0446 PF13292 1-deoxy-D-xylulose-5-phosphate synthase XPG1_0446 PF02779 Transketolase, pyrimidine binding domain XPG1_0446 PF02780 Transketolase, C-terminal domain XPG1_0447 PF00348 Polyprenyl synthetase XPG1_0448 PF02609 Exonuclease VII small subunit XPG1_0449 PF02926 THUMP domain XPG1_0449 PF02568 Thiamine biosynthesis protein (ThiI) XPG1_0450 PF08546 Ketopantoate reductase PanE/ApbA C terminal XPG1_0450 PF02558 Ketopantoate reductase PanE/ApbA XPG1_0451 PF04461 Protein of unknown function (DUF520) XPG1_0452 PF07690 Major Facilitator Superfamily XPG1_0453 PF01040 UbiA prenyltransferase family XPG1_0454 PF03626 Prokaryotic Cytochrome C oxidase subunit IV XPG1_0455 PF00510 Cytochrome c oxidase subunit III XPG1_0456 PF00115 Cytochrome C and Quinol oxidase polypeptide I XPG1_0457 PF06481 COX Aromatic Rich Motif XPG1_0457 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XPG1_0458 PF03502 Nucleoside-specific channel-forming protein, Tsx XPG1_0459 PF07690 Major Facilitator Superfamily XPG1_0460 PF03923 Uncharacterized lipoprotein XPG1_0460 PF08139 Prokaryotic membrane lipoprotein lipid attachment site XPG1_0461 PF01722 BolA-like protein XPG1_0462 PF05697 Bacterial trigger factor protein (TF) XPG1_0462 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XPG1_0462 PF05698 Bacterial trigger factor protein (TF) C-terminus XPG1_0463 PF00574 Clp protease XPG1_0464 PF06689 ClpX C4-type zinc finger XPG1_0464 PF10431 C-terminal, D2-small domain, of ClpB protein XPG1_0464 PF07724 AAA domain (Cdc48 subfamily) XPG1_0465 PF00004 ATPase family associated with various cellular activities (AAA) XPG1_0465 PF05362 Lon protease (S16) C-terminal proteolytic domain XPG1_0465 PF02190 ATP-dependent protease La (LON) substrate-binding domain XPG1_0466 PF00216 Bacterial DNA-binding protein XPG1_0467 PF13145 PPIC-type PPIASE domain XPG1_0470 PF06508 Queuosine biosynthesis protein QueC XPG1_0472 PF01037 Lrp/AsnC ligand binding domain XPG1_0472 PF13404 AsnC-type helix-turn-helix domain XPG1_0473 PF00664 ABC transporter transmembrane region XPG1_0473 PF00005 ABC transporter XPG1_0474 PF00664 ABC transporter transmembrane region XPG1_0474 PF00005 ABC transporter XPG1_0475 PF00543 Nitrogen regulatory protein P-II XPG1_0476 PF00909 Ammonium Transporter Family XPG1_0477 PF05321 Haemolysin expression modulating protein XPG1_0478 PF10757 Biofilm formation regulator YbaJ XPG1_0479 PF00873 AcrB/AcrD/AcrF family XPG1_0480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XPG1_0480 PF00529 HlyD membrane-fusion protein of T1SS XPG1_0481 PF08361 MAATS-type transcriptional repressor, C-terminal region XPG1_0481 PF00440 Bacterial regulatory proteins, tetR family XPG1_0484 PF00156 Phosphoribosyl transferase domain XPG1_0485 PF12170 DNA polymerase III tau subunit V interacting with alpha XPG1_0485 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding XPG1_0485 PF12169 DNA polymerase III subunits gamma and tau domain III XPG1_0486 PF02575 YbaB/EbfC DNA-binding family XPG1_0487 PF13662 Toprim domain XPG1_0487 PF02132 RecR protein XPG1_0488 PF00183 Hsp90 protein XPG1_0488 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XPG1_0489 PF05191 Adenylate kinase, active site lid XPG1_0490 PF00762 Ferrochelatase XPG1_0491 PF02706 Chain length determinant protein XPG1_0492 PF00294 pfkB family carbohydrate kinase XPG1_0493 PF00999 Sodium/hydrogen exchanger family XPG1_0493 PF02254 TrkA-N domain XPG1_0496 PF00149 Calcineurin-like phosphoesterase XPG1_0496 PF02872 5'-nucleotidase, C-terminal domain XPG1_0497 PF04073 Aminoacyl-tRNA editing domain XPG1_0498 PF01963 TraB family XPG1_0499 PF00403 Heavy-metal-associated domain XPG1_0500 PF13411 MerR HTH family regulatory protein XPG1_0501 PF01957 NfeD-like C-terminal, partner-binding XPG1_0502 PF01145 SPFH domain / Band 7 family XPG1_0502 PF16200 C-terminal region of band_7 XPG1_0503 PF00085 Thioredoxin XPG1_0504 PF00106 short chain dehydrogenase XPG1_0505 PF13472 GDSL-like Lipase/Acylhydrolase family XPG1_0506 PF00005 ABC transporter XPG1_0510 PF01053 Cys/Met metabolism PLP-dependent enzyme XPG1_0514 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) XPG1_0515 PF01867 CRISPR associated protein Cas1 XPG1_0517 PF09704 CRISPR-associated protein (Cas_Cas5) XPG1_0521 PF00271 Helicase conserved C-terminal domain XPG1_0521 PF18019 HD domain XPG1_0521 PF00270 DEAD/DEAH box helicase XPG1_0530 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family XPG1_0530 PF00356 Bacterial regulatory proteins, lacI family XPG1_0531 PF01202 Shikimate kinase XPG1_0532 PF02447 GntP family permease XPG1_0535 PF03062 MBOAT, membrane-bound O-acyltransferase family XPG1_0536 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase XPG1_0540 PF02342 TerD domain XPG1_0541 PF03741 Integral membrane protein TerC family XPG1_0542 PF05099 Tellurite resistance protein TerB XPG1_0543 PF02342 TerD domain XPG1_0544 PF02342 TerD domain XPG1_0548 PF15608 PELOTA RNA binding domain XPG1_0548 PF11202 Phosphoribosyl transferase (PRTase) XPG1_0550 PF03350 Uncharacterized protein family, UPF0114 XPG1_0553 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain XPG1_0553 PF02222 ATP-grasp domain XPG1_0554 PF00731 AIR carboxylase XPG1_0555 PF00149 Calcineurin-like phosphoesterase XPG1_0556 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XPG1_0558 PF00005 ABC transporter XPG1_0558 PF08402 TOBE domain XPG1_0559 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_0560 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_0561 PF13416 Bacterial extracellular solute-binding protein XPG1_0564 PF13508 Acetyltransferase (GNAT) domain XPG1_0565 PF01541 GIY-YIG catalytic domain XPG1_0567 PF01243 Pyridoxamine 5'-phosphate oxidase XPG1_0569 PF13597 Anaerobic ribonucleoside-triphosphate reductase XPG1_0569 PF03477 ATP cone domain XPG1_0570 PF01042 Endoribonuclease L-PSP XPG1_0571 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain XPG1_0571 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain XPG1_0573 PF03811 InsA N-terminal domain XPG1_0573 PF12759 InsA C-terminal domain XPG1_0574 PF03400 IS1 transposase XPG1_0575 PF05684 Protein of unknown function (DUF819) XPG1_0576 PF11944 Protein of unknown function (DUF3461) XPG1_0577 PF00589 Phage integrase family XPG1_0580 PF03783 Curli production assembly/transport component CsgG XPG1_0582 PF05643 Putative bacterial lipoprotein (DUF799) XPG1_0583 PF01554 MatE XPG1_0584 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) XPG1_0585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XPG1_0585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XPG1_0586 PF00156 Phosphoribosyl transferase domain XPG1_0587 PF00484 Carbonic anhydrase XPG1_0589 PF00005 ABC transporter XPG1_0590 PF01061 ABC-2 type transporter XPG1_0591 PF00501 AMP-binding enzyme XPG1_0591 PF13193 AMP-binding enzyme C-terminal domain XPG1_0591 PF00550 Phosphopantetheine attachment site XPG1_0591 PF00668 Condensation domain XPG1_0592 PF01494 FAD binding domain XPG1_0594 PF08220 DeoR-like helix-turn-helix domain XPG1_0594 PF00455 DeoR C terminal sensor domain XPG1_0595 PF08013 Tagatose 6 phosphate kinase XPG1_0596 PF03830 PTS system sorbose subfamily IIB component XPG1_0597 PF03609 PTS system sorbose-specific iic component XPG1_0598 PF03613 PTS system mannose/fructose/sorbose family IID component XPG1_0599 PF03610 PTS system fructose IIA component XPG1_0600 PF01380 SIS domain XPG1_0601 PF01116 Fructose-bisphosphate aldolase class-II XPG1_0603 PF02569 Pantoate-beta-alanine ligase XPG1_0604 PF02548 Ketopantoate hydroxymethyltransferase XPG1_0605 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XPG1_0606 PF01743 Poly A polymerase head domain XPG1_0606 PF12626 Polymerase A arginine-rich C-terminus XPG1_0606 PF12627 Probable RNA and SrmB- binding site of polymerase A XPG1_0607 PF00749 tRNA synthetases class I (E and Q), catalytic domain XPG1_0608 PF01258 Prokaryotic dksA/traR C4-type zinc finger XPG1_0610 PF17746 SfsA N-terminal OB domain XPG1_0610 PF03749 Sugar fermentation stimulation protein RE domain XPG1_0611 PF00270 DEAD/DEAH box helicase XPG1_0611 PF04408 Helicase associated domain (HA2) XPG1_0611 PF00271 Helicase conserved C-terminal domain XPG1_0611 PF08482 ATP-dependent helicase C-terminal XPG1_0612 PF14814 Bifunctional transglycosylase second domain XPG1_0612 PF00905 Penicillin binding protein transpeptidase domain XPG1_0612 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal XPG1_0612 PF00912 Transglycosylase XPG1_0613 PF00313 'Cold-shock' DNA-binding domain XPG1_0614 PF00202 Aminotransferase class-III XPG1_0615 PF01521 Iron-sulphur cluster biosynthesis XPG1_0616 PF01381 Helix-turn-helix XPG1_0616 PF07883 Cupin domain XPG1_0617 PF03594 Benzoate membrane transport protein XPG1_0619 PF02371 Transposase IS116/IS110/IS902 family XPG1_0619 PF01548 Transposase XPG1_0623 PF05638 Type VI secretion system effector, Hcp XPG1_0626 PF01548 Transposase XPG1_0626 PF02371 Transposase IS116/IS110/IS902 family XPG1_0628 PF01497 Periplasmic binding protein XPG1_0629 PF01048 Phosphorylase superfamily XPG1_0630 PF01966 HD domain XPG1_0630 PF13286 Phosphohydrolase-associated domain XPG1_0631 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XPG1_0631 PF00672 HAMP domain XPG1_0631 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XPG1_0631 PF01627 Hpt domain XPG1_0631 PF00072 Response regulator receiver domain XPG1_0631 PF00512 His Kinase A (phospho-acceptor) domain XPG1_0632 PF01938 TRAM domain XPG1_0632 PF05958 tRNA (Uracil-5-)-methyltransferase XPG1_0633 PF04607 Region found in RelA / SpoT proteins XPG1_0633 PF02824 TGS domain XPG1_0633 PF13291 ACT domain XPG1_0634 PF03819 MazG nucleotide pyrophosphohydrolase domain XPG1_0635 PF00117 Glutamine amidotransferase class-I XPG1_0635 PF06418 CTP synthase N-terminus XPG1_0636 PF00113 Enolase, C-terminal TIM barrel domain XPG1_0636 PF03952 Enolase, N-terminal domain XPG1_0637 PF00939 Sodium:sulfate symporter transmembrane region XPG1_0638 PF00171 Aldehyde dehydrogenase family XPG1_0640 PF17283 SprT-like zinc ribbon domain XPG1_0640 PF10263 SprT-like family XPG1_0641 PF02772 S-adenosylmethionine synthetase, central domain XPG1_0641 PF02773 S-adenosylmethionine synthetase, C-terminal domain XPG1_0641 PF00438 S-adenosylmethionine synthetase, N-terminal domain XPG1_0643 PF17944 Arginine decarboxylase C-terminal helical extension XPG1_0643 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XPG1_0643 PF17810 Arginine decarboxylase helical bundle domain XPG1_0644 PF00491 Arginase family XPG1_0646 PF07690 Major Facilitator Superfamily XPG1_0648 PF16864 Dimerisation domain XPG1_0648 PF00891 O-methyltransferase domain XPG1_0649 PF12867 DinB superfamily XPG1_0649 PF03781 Sulfatase-modifying factor enzyme 1 XPG1_0652 PF00925 GTP cyclohydrolase II XPG1_0655 PF16363 GDP-mannose 4,6 dehydratase XPG1_0659 PF00291 Pyridoxal-phosphate dependent enzyme XPG1_0660 PF01053 Cys/Met metabolism PLP-dependent enzyme XPG1_0661 PF01327 Polypeptide deformylase XPG1_0662 PF02976 DNA mismatch repair enzyme MutH XPG1_0663 PF00180 Isocitrate/isopropylmalate dehydrogenase XPG1_0664 PF00682 HMGL-like XPG1_0664 PF08502 LeuA allosteric (dimerisation) domain XPG1_0665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_0665 PF03466 LysR substrate binding domain XPG1_0666 PF00501 AMP-binding enzyme XPG1_0667 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XPG1_0667 PF00205 Thiamine pyrophosphate enzyme, central domain XPG1_0667 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XPG1_0668 PF10369 Small subunit of acetolactate synthase XPG1_0669 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family XPG1_0669 PF00356 Bacterial regulatory proteins, lacI family XPG1_0671 PF02381 MraZ protein, putative antitoxin-like XPG1_0672 PF01795 MraW methylase family XPG1_0673 PF04999 Cell division protein FtsL XPG1_0674 PF03717 Penicillin-binding Protein dimerisation domain XPG1_0674 PF00905 Penicillin binding protein transpeptidase domain XPG1_0675 PF08245 Mur ligase middle domain XPG1_0675 PF02875 Mur ligase family, glutamate ligase domain XPG1_0675 PF01225 Mur ligase family, catalytic domain XPG1_0676 PF08245 Mur ligase middle domain XPG1_0676 PF01225 Mur ligase family, catalytic domain XPG1_0676 PF02875 Mur ligase family, glutamate ligase domain XPG1_0677 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 XPG1_0677 PF00953 Glycosyl transferase family 4 XPG1_0678 PF08245 Mur ligase middle domain XPG1_0678 PF02875 Mur ligase family, glutamate ligase domain XPG1_0679 PF01098 Cell cycle protein XPG1_0680 PF04101 Glycosyltransferase family 28 C-terminal domain XPG1_0680 PF03033 Glycosyltransferase family 28 N-terminal domain XPG1_0681 PF01225 Mur ligase family, catalytic domain XPG1_0681 PF08245 Mur ligase middle domain XPG1_0681 PF02875 Mur ligase family, glutamate ligase domain XPG1_0682 PF01820 D-ala D-ala ligase N-terminus XPG1_0682 PF07478 D-ala D-ala ligase C-terminus XPG1_0683 PF03799 Cell division protein FtsQ XPG1_0683 PF08478 POTRA domain, FtsQ-type XPG1_0684 PF02491 SHS2 domain inserted in FTSA XPG1_0685 PF00091 Tubulin/FtsZ family, GTPase domain XPG1_0685 PF12327 FtsZ family, C-terminal domain XPG1_0686 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase XPG1_0688 PF06558 Secretion monitor precursor protein (SecM) XPG1_0689 PF07517 SecA DEAD-like domain XPG1_0689 PF07516 SecA Wing and Scaffold domain XPG1_0689 PF01043 SecA preprotein cross-linking domain XPG1_0689 PF02810 SEC-C motif XPG1_0690 PF12848 ABC transporter XPG1_0690 PF16326 ABC transporter C-terminal domain XPG1_0690 PF00005 ABC transporter XPG1_0691 PF00293 NUDIX domain XPG1_0692 PF03884 DNA gyrase inhibitor YacG XPG1_0693 PF07072 Cell division protein XPG1_0694 PF01121 Dephospho-CoA kinase XPG1_0695 PF00482 Type II secretion system (T2SS), protein F XPG1_0696 PF00437 Type II/IV secretion system protein XPG1_0696 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XPG1_0697 PF07963 Prokaryotic N-terminal methylation motif XPG1_0698 PF01510 N-acetylmuramoyl-L-alanine amidase XPG1_0699 PF17113 Regulatory signalling modulator protein AmpE XPG1_0701 PF00392 Bacterial regulatory proteins, gntR family XPG1_0701 PF07729 FCD domain XPG1_0702 PF17831 Pyruvate dehydrogenase E1 component middle domain XPG1_0702 PF00456 Transketolase, thiamine diphosphate binding domain XPG1_0703 PF02817 e3 binding domain XPG1_0703 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XPG1_0703 PF00364 Biotin-requiring enzyme XPG1_0704 PF07992 Pyridine nucleotide-disulphide oxidoreductase XPG1_0704 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XPG1_0708 PF00665 Integrase core domain XPG1_0708 PF13333 Integrase core domain XPG1_0708 PF13276 HTH-like domain XPG1_0711 PF05853 beta-keto acid cleavage enzyme XPG1_0713 PF02803 Thiolase, C-terminal domain XPG1_0713 PF00108 Thiolase, N-terminal domain XPG1_0714 PF00490 Delta-aminolevulinic acid dehydratase XPG1_0715 PF00892 EamA-like transporter family XPG1_0719 PF04227 Indigoidine synthase A like protein XPG1_0720 PF00501 AMP-binding enzyme XPG1_0720 PF13193 AMP-binding enzyme C-terminal domain XPG1_0720 PF00668 Condensation domain XPG1_0720 PF00975 Thioesterase domain XPG1_0720 PF00550 Phosphopantetheine attachment site XPG1_0721 PF13419 Haloacid dehalogenase-like hydrolase XPG1_0730 PF00330 Aconitase family (aconitate hydratase) XPG1_0730 PF11791 Aconitate B N-terminal domain XPG1_0730 PF06434 Aconitate hydratase 2 N-terminus XPG1_0731 PF06062 Uncharacterised protein family (UPF0231) XPG1_0732 PF00924 Mechanosensitive ion channel XPG1_0732 PF05552 Conserved TM helix XPG1_0733 PF04402 Protein of unknown function (DUF541) XPG1_0734 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_0734 PF03466 LysR substrate binding domain XPG1_0735 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) XPG1_0736 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XPG1_0736 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XPG1_0736 PF01842 ACT domain XPG1_0737 PF01812 5-formyltetrahydrofolate cyclo-ligase family XPG1_0739 PF05164 Cell division protein ZapA XPG1_0741 PF03695 Uncharacterised protein family (UPF0149) XPG1_0742 PF00557 Metallopeptidase family M24 XPG1_0742 PF05195 Aminopeptidase P, N-terminal domain XPG1_0743 PF01494 FAD binding domain XPG1_0744 PF01494 FAD binding domain XPG1_0745 PF08669 Glycine cleavage T-protein C-terminal barrel domain XPG1_0745 PF01571 Aminomethyltransferase folate-binding domain XPG1_0746 PF01597 Glycine cleavage H-protein XPG1_0747 PF02347 Glycine cleavage system P-protein XPG1_0749 PF01571 Aminomethyltransferase folate-binding domain XPG1_0751 PF03937 Flavinator of succinate dehydrogenase XPG1_0753 PF00258 Flavodoxin XPG1_0754 PF02899 Phage integrase, N-terminal SAM-like domain XPG1_0754 PF00589 Phage integrase family XPG1_0755 PF10411 Disulfide bond isomerase protein N-terminus XPG1_0755 PF13098 Thioredoxin-like domain XPG1_0756 PF01368 DHH family XPG1_0756 PF17768 RecJ OB domain XPG1_0756 PF02272 DHHA1 domain XPG1_0757 PF00472 RF-1 domain XPG1_0757 PF03462 PCRF domain XPG1_0758 PF00152 tRNA synthetases class II (D, K and N) XPG1_0758 PF01336 OB-fold nucleic acid binding domain XPG1_0759 PF00589 Phage integrase family XPG1_0759 PF14659 Phage integrase, N-terminal SAM-like domain XPG1_0759 PF13356 Arm DNA-binding domain XPG1_0766 PF01609 Transposase DDE domain XPG1_0766 PF13808 DDE_Tnp_1-associated XPG1_0767 PF12762 ISXO2-like transposase domain XPG1_0776 PF01476 LysM domain XPG1_0776 PF01464 Transglycosylase SLT domain XPG1_0777 PF00753 Metallo-beta-lactamase superfamily XPG1_0777 PF16123 Hydroxyacylglutathione hydrolase C-terminus XPG1_0778 PF08241 Methyltransferase domain XPG1_0779 PF00075 RNase H XPG1_0780 PF00929 Exonuclease XPG1_0783 PF00196 Bacterial regulatory proteins, luxR family XPG1_0783 PF00072 Response regulator receiver domain XPG1_0787 PF01435 Peptidase family M48 XPG1_0791 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase XPG1_0792 PF02654 Cobalamin-5-phosphate synthase XPG1_0793 PF02277 Phosphoribosyltransferase XPG1_0794 PF00501 AMP-binding enzyme XPG1_0794 PF13193 AMP-binding enzyme C-terminal domain XPG1_0796 PF02677 Epoxyqueuosine reductase QueH XPG1_0797 PF12833 Helix-turn-helix domain XPG1_0799 PF07022 Bacteriophage CI repressor helix-turn-helix domain XPG1_0799 PF16452 Bacteriophage CI repressor C-terminal domain XPG1_0810 PF03406 Phage tail fibre repeat XPG1_0811 PF01501 Glycosyl transferase family 8 XPG1_0811 PF08437 Glycosyl transferase family 8 C-terminal XPG1_0813 PF08400 Prophage tail fibre N-terminal XPG1_0813 PF07484 Phage Tail Collar Domain XPG1_0813 PF03335 Phage tail fibre repeat XPG1_0814 PF13439 Glycosyltransferase Family 4 XPG1_0814 PF00534 Glycosyl transferases group 1 XPG1_0815 PF01609 Transposase DDE domain XPG1_0815 PF13808 DDE_Tnp_1-associated XPG1_0819 PF00884 Sulfatase XPG1_0825 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XPG1_0835 PF04325 Protein of unknown function (DUF465) XPG1_0836 PF03974 Ecotin XPG1_0841 PF00230 Major intrinsic protein XPG1_0846 PF04264 YceI-like domain XPG1_0847 PF01292 Prokaryotic cytochrome b561 XPG1_0849 PF00043 Glutathione S-transferase, C-terminal domain XPG1_0849 PF13417 Glutathione S-transferase, N-terminal domain XPG1_0850 PF13193 AMP-binding enzyme C-terminal domain XPG1_0850 PF00501 AMP-binding enzyme XPG1_0850 PF16177 Acetyl-coenzyme A synthetase N-terminus XPG1_0851 PF03972 MmgE/PrpD family XPG1_0852 PF00285 Citrate synthase, C-terminal domain XPG1_0854 PF00158 Sigma-54 interaction domain XPG1_0854 PF02954 Bacterial regulatory protein, Fis family XPG1_0854 PF06506 Propionate catabolism activator XPG1_0856 PF07690 Major Facilitator Superfamily XPG1_0857 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XPG1_0857 PF01627 Hpt domain XPG1_0857 PF16359 RcsD-ABL domain XPG1_0858 PF00072 Response regulator receiver domain XPG1_0858 PF00196 Bacterial regulatory proteins, luxR family XPG1_0859 PF00512 His Kinase A (phospho-acceptor) domain XPG1_0859 PF00072 Response regulator receiver domain XPG1_0859 PF09456 RcsC Alpha-Beta-Loop (ABL) XPG1_0859 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XPG1_0860 PF00521 DNA gyrase/topoisomerase IV, subunit A XPG1_0860 PF03989 DNA gyrase C-terminal domain, beta-propeller XPG1_0862 PF03477 ATP cone domain XPG1_0862 PF00317 Ribonucleotide reductase, all-alpha domain XPG1_0862 PF02867 Ribonucleotide reductase, barrel domain XPG1_0863 PF00268 Ribonucleotide reductase, small chain XPG1_0864 PF00111 2Fe-2S iron-sulfur cluster binding domain XPG1_0866 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading XPG1_0866 PF18416 N-acetylglucosamine binding protein domain 2 XPG1_0883 PF13333 Integrase core domain XPG1_0883 PF00665 Integrase core domain XPG1_0883 PF13276 HTH-like domain XPG1_0885 PF13356 Arm DNA-binding domain XPG1_0885 PF00589 Phage integrase family XPG1_0888 PF00589 Phage integrase family XPG1_0888 PF12167 Arm DNA-binding domain XPG1_0902 PF02599 Global regulator protein family XPG1_0912 PF06530 Phage antitermination protein Q XPG1_0924 PF03354 Phage Terminase XPG1_0955 PF03354 Phage Terminase XPG1_0956 PF00929 Exonuclease XPG1_0960 PF17854 FtsK alpha domain XPG1_0960 PF01580 FtsK/SpoIIIE family XPG1_0960 PF09397 Ftsk gamma domain XPG1_0966 PF00239 Resolvase, N terminal domain XPG1_0966 PF02796 Helix-turn-helix domain of resolvase XPG1_0969 PF01668 SmpB protein XPG1_0970 PF03364 Polyketide cyclase / dehydrase and lipid transport XPG1_0971 PF03658 RnfH family Ubiquitin XPG1_0972 PF04355 SmpA / OmlA family XPG1_0973 PF02463 RecF/RecN/SMC N terminal domain XPG1_0974 PF01513 ATP-NAD kinase XPG1_0975 PF01025 GrpE XPG1_0976 PF03167 Uracil DNA glycosylase superfamily XPG1_0978 PF01228 Glycine radical XPG1_0980 PF00271 Helicase conserved C-terminal domain XPG1_0980 PF00270 DEAD/DEAH box helicase XPG1_0981 PF05175 Methyltransferase small domain XPG1_0982 PF04542 Sigma-70 region 2 XPG1_0982 PF08281 Sigma-70, region 4 XPG1_0983 PF03872 Anti sigma-E protein RseA, N-terminal domain XPG1_0983 PF03873 Anti sigma-E protein RseA, C-terminal domain XPG1_0984 PF03888 MucB/RseB N-terminal domain XPG1_0984 PF17188 MucB/RseB C-terminal domain XPG1_0986 PF00679 Elongation factor G C-terminus XPG1_0986 PF00009 Elongation factor Tu GTP binding domain XPG1_0986 PF03144 Elongation factor Tu domain 2 XPG1_0986 PF06421 GTP-binding protein LepA C-terminus XPG1_0987 PF10502 Signal peptidase, peptidase S26 XPG1_0988 PF00035 Double-stranded RNA binding motif XPG1_0988 PF14622 Ribonuclease-III-like XPG1_0989 PF01926 50S ribosome-binding GTPase XPG1_0989 PF07650 KH domain XPG1_0990 PF11967 Recombination protein O N terminal XPG1_0990 PF02565 Recombination protein O C terminal XPG1_0991 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ XPG1_0992 PF01648 4'-phosphopantetheinyl transferase superfamily XPG1_0993 PF12838 4Fe-4S dicluster domain XPG1_1000 PF00145 C-5 cytosine-specific DNA methylase XPG1_1000 PF12728 Helix-turn-helix domain XPG1_1017 PF00959 Phage lysozyme XPG1_1018 PF03245 Bacteriophage Rz lysis protein XPG1_1020 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system XPG1_1022 PF10668 Phage terminase small subunit XPG1_1022 PF03592 Terminase small subunit XPG1_1023 PF04466 Phage terminase large subunit XPG1_1023 PF17288 Terminase RNAseH like domain XPG1_1039 PF10145 Phage-related minor tail protein XPG1_1039 PF01464 Transglycosylase SLT domain XPG1_1039 PF01551 Peptidase family M23 XPG1_1052 PF02413 Caudovirales tail fibre assembly protein, lambda gpK XPG1_1053 PF02413 Caudovirales tail fibre assembly protein, lambda gpK XPG1_1056 PF00239 Resolvase, N terminal domain XPG1_1056 PF02796 Helix-turn-helix domain of resolvase XPG1_1057 PF14437 MafB19-like deaminase XPG1_1058 PF00497 Bacterial extracellular solute-binding proteins, family 3 XPG1_1058 PF01464 Transglycosylase SLT domain XPG1_1059 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain XPG1_1059 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal XPG1_1059 PF02769 AIR synthase related protein, C-terminal domain XPG1_1061 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XPG1_1061 PF00512 His Kinase A (phospho-acceptor) domain XPG1_1062 PF13942 YfhG lipoprotein XPG1_1063 PF00158 Sigma-54 interaction domain XPG1_1063 PF00072 Response regulator receiver domain XPG1_1064 PF00795 Carbon-nitrogen hydrolase XPG1_1064 PF02540 NAD synthase XPG1_1065 PF00543 Nitrogen regulatory protein P-II XPG1_1066 PF00175 Oxidoreductase NAD-binding domain XPG1_1066 PF00042 Globin XPG1_1066 PF00970 Oxidoreductase FAD-binding domain XPG1_1067 PF00464 Serine hydroxymethyltransferase XPG1_1068 PF12832 MFS_1 like family XPG1_1069 PF01032 FecCD transport family XPG1_1070 PF01032 FecCD transport family XPG1_1071 PF00005 ABC transporter XPG1_1072 PF00282 Pyridoxal-dependent decarboxylase conserved domain XPG1_1073 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) XPG1_1074 PF00668 Condensation domain XPG1_1074 PF00550 Phosphopantetheine attachment site XPG1_1074 PF00975 Thioesterase domain XPG1_1074 PF00501 AMP-binding enzyme XPG1_1074 PF13193 AMP-binding enzyme C-terminal domain XPG1_1075 PF01497 Periplasmic binding protein XPG1_1076 PF00501 AMP-binding enzyme XPG1_1076 PF13193 AMP-binding enzyme C-terminal domain XPG1_1076 PF00668 Condensation domain XPG1_1076 PF00550 Phosphopantetheine attachment site XPG1_1076 PF00975 Thioesterase domain XPG1_1077 PF07715 TonB-dependent Receptor Plug Domain XPG1_1078 PF07883 Cupin domain XPG1_1080 PF00857 Isochorismatase family XPG1_1080 PF00550 Phosphopantetheine attachment site XPG1_1081 PF13193 AMP-binding enzyme C-terminal domain XPG1_1081 PF00501 AMP-binding enzyme XPG1_1082 PF00425 chorismate binding enzyme XPG1_1086 PF12323 Helix-turn-helix domain XPG1_1087 PF00459 Inositol monophosphatase family XPG1_1088 PF00588 SpoU rRNA Methylase family XPG1_1089 PF02082 Transcriptional regulator XPG1_1090 PF00266 Aminotransferase class-V XPG1_1091 PF01592 NifU-like N terminal domain XPG1_1092 PF01521 Iron-sulphur cluster biosynthesis XPG1_1093 PF07743 HSCB C-terminal oligomerisation domain XPG1_1094 PF00012 Hsp70 protein XPG1_1095 PF00111 2Fe-2S iron-sulfur cluster binding domain XPG1_1096 PF04384 Iron-sulphur cluster assembly XPG1_1097 PF12404 Peptidase XPG1_1097 PF00883 Cytosol aminopeptidase family, catalytic domain XPG1_1099 PF11974 Bacterial alpha-2-macroglobulin MG3 domain XPG1_1099 PF01835 MG2 domain XPG1_1099 PF00207 Alpha-2-macroglobulin family XPG1_1099 PF17962 Bacterial macroglobulin domain 6 XPG1_1099 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain XPG1_1099 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain XPG1_1099 PF07703 Alpha-2-macroglobulin bait region domain XPG1_1099 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain XPG1_1099 PF07678 A-macroglobulin TED domain XPG1_1100 PF06832 Penicillin-Binding Protein C-terminus Family XPG1_1100 PF00912 Transglycosylase XPG1_1100 PF00905 Penicillin binding protein transpeptidase domain XPG1_1102 PF13443 Cro/C1-type HTH DNA-binding domain XPG1_1104 PF00334 Nucleoside diphosphate kinase XPG1_1105 PF04055 Radical SAM superfamily XPG1_1107 PF13464 Domain of unknown function (DUF4115) XPG1_1108 PF04551 GcpE protein XPG1_1109 PF13393 Histidyl-tRNA synthetase XPG1_1109 PF03129 Anticodon binding domain XPG1_1110 PF09976 Tetratricopeptide repeat-like domain XPG1_1111 PF13360 PQQ-like domain XPG1_1112 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal XPG1_1112 PF01926 50S ribosome-binding GTPase XPG1_1114 PF01447 Thermolysin metallopeptidase, catalytic domain XPG1_1114 PF02868 Thermolysin metallopeptidase, alpha-helical domain XPG1_1114 PF16485 Protealysin propeptide XPG1_1115 PF01218 Coproporphyrinogen III oxidase XPG1_1116 PF13693 Winged helix-turn-helix DNA-binding XPG1_1119 PF03354 Phage Terminase XPG1_1137 PF00583 Acetyltransferase (GNAT) family XPG1_1138 PF06572 Protein of unknown function (DUF1131) XPG1_1140 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_1141 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_1142 PF00005 ABC transporter XPG1_1143 PF00291 Pyridoxal-phosphate dependent enzyme XPG1_1144 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 XPG1_1145 PF02896 PEP-utilising enzyme, TIM barrel domain XPG1_1145 PF05524 PEP-utilising enzyme, N-terminal XPG1_1145 PF00391 PEP-utilising enzyme, mobile domain XPG1_1146 PF00381 PTS HPr component phosphorylation site XPG1_1149 PF00291 Pyridoxal-phosphate dependent enzyme XPG1_1151 PF04354 ZipA, C-terminal FtsZ-binding domain XPG1_1152 PF01653 NAD-dependent DNA ligase adenylation domain XPG1_1152 PF03120 NAD-dependent DNA ligase OB-fold domain XPG1_1152 PF03119 NAD-dependent DNA ligase C4 zinc finger domain XPG1_1152 PF00533 BRCA1 C Terminus (BRCT) domain XPG1_1152 PF12826 Helix-hairpin-helix motif XPG1_1153 PF07662 Na+ dependent nucleoside transporter C-terminus XPG1_1153 PF07670 Nucleoside recognition XPG1_1153 PF01773 Na+ dependent nucleoside transporter N-terminus XPG1_1154 PF12843 Putative quorum-sensing-regulated virulence factor XPG1_1156 PF00749 tRNA synthetases class I (E and Q), catalytic domain XPG1_1166 PF04333 MlaA lipoprotein XPG1_1167 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) XPG1_1169 PF02803 Thiolase, C-terminal domain XPG1_1169 PF00108 Thiolase, N-terminal domain XPG1_1170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XPG1_1170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XPG1_1170 PF00378 Enoyl-CoA hydratase/isomerase XPG1_1171 PF00300 Histidine phosphatase superfamily (branch 1) XPG1_1172 PF01713 Smr domain XPG1_1173 PF01979 Amidohydrolase family XPG1_1174 PF00491 Arginase family XPG1_1175 PF00392 Bacterial regulatory proteins, gntR family XPG1_1175 PF07702 UTRA domain XPG1_1176 PF01175 Urocanase Rossmann-like domain XPG1_1176 PF17391 Urocanase N-terminal domain XPG1_1176 PF17392 Urocanase C-terminal domain XPG1_1177 PF00221 Aromatic amino acid lyase XPG1_1178 PF00324 Amino acid permease XPG1_1182 PF05175 Methyltransferase small domain XPG1_1183 PF01264 Chorismate synthase XPG1_1184 PF01925 Sulfite exporter TauE/SafE XPG1_1185 PF04315 Elongation factor P hydroxylase XPG1_1186 PF08891 YfcL protein XPG1_1187 PF05430 S-adenosyl-L-methionine-dependent methyltransferase XPG1_1187 PF01266 FAD dependent oxidoreductase XPG1_1188 PF00109 Beta-ketoacyl synthase, N-terminal domain XPG1_1188 PF02801 Beta-ketoacyl synthase, C-terminal domain XPG1_1189 PF01970 Tripartite tricarboxylate transporter TctA family XPG1_1195 PF01022 Bacterial regulatory protein, arsR family XPG1_1196 PF07690 Major Facilitator Superfamily XPG1_1198 PF00486 Transcriptional regulatory protein, C terminal XPG1_1198 PF00072 Response regulator receiver domain XPG1_1199 PF00512 His Kinase A (phospho-acceptor) domain XPG1_1199 PF08521 Two-component sensor kinase N-terminal XPG1_1199 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XPG1_1201 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XPG1_1201 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XPG1_1201 PF11890 Domain of unknown function (DUF3410) XPG1_1202 PF02774 Semialdehyde dehydrogenase, dimerisation domain XPG1_1202 PF01118 Semialdehyde dehydrogenase, NAD binding domain XPG1_1203 PF01416 tRNA pseudouridine synthase XPG1_1204 PF09335 SNARE associated Golgi protein XPG1_1205 PF17848 Acetyl-coA carboxylase zinc finger domain XPG1_1205 PF01039 Carboxyl transferase domain XPG1_1206 PF08245 Mur ligase middle domain XPG1_1206 PF02875 Mur ligase family, glutamate ligase domain XPG1_1207 PF05036 Sporulation related domain XPG1_1208 PF02674 Colicin V production protein XPG1_1209 PF00156 Phosphoribosyl transferase domain XPG1_1210 PF02441 Flavoprotein XPG1_1211 PF01370 NAD dependent epimerase/dehydratase family XPG1_1211 PF08338 Domain of unknown function (DUF1731) XPG1_1212 PF00043 Glutathione S-transferase, C-terminal domain XPG1_1212 PF02798 Glutathione S-transferase, N-terminal domain XPG1_1213 PF00293 NUDIX domain XPG1_1214 PF00202 Aminotransferase class-III XPG1_1215 PF04958 Arginine N-succinyltransferase beta subunit XPG1_1216 PF00171 Aldehyde dehydrogenase family XPG1_1217 PF04996 Succinylarginine dihydrolase XPG1_1218 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family XPG1_1219 PF00324 Amino acid permease XPG1_1222 PF00501 AMP-binding enzyme XPG1_1222 PF00550 Phosphopantetheine attachment site XPG1_1222 PF00668 Condensation domain XPG1_1222 PF13193 AMP-binding enzyme C-terminal domain XPG1_1223 PF01515 Phosphate acetyl/butaryl transferase XPG1_1223 PF07085 DRTGG domain XPG1_1224 PF00871 Acetokinase family XPG1_1225 PF04217 Protein of unknown function, DUF412 XPG1_1226 PF02080 TrkA-C domain XPG1_1226 PF03600 Citrate transporter XPG1_1228 PF00155 Aminotransferase class I and II XPG1_1229 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_1229 PF03466 LysR substrate binding domain XPG1_1230 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 XPG1_1231 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit XPG1_1232 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit XPG1_1232 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit XPG1_1234 PF10531 SLBB domain XPG1_1234 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XPG1_1234 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit XPG1_1235 PF00384 Molybdopterin oxidoreductase XPG1_1235 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XPG1_1235 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XPG1_1235 PF01568 Molydopterin dinucleotide binding domain XPG1_1236 PF00146 NADH dehydrogenase XPG1_1237 PF12838 4Fe-4S dicluster domain XPG1_1238 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 XPG1_1239 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XPG1_1240 PF00361 Proton-conducting membrane transporter XPG1_1240 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XPG1_1241 PF00361 Proton-conducting membrane transporter XPG1_1242 PF00361 Proton-conducting membrane transporter XPG1_1243 PF00563 EAL domain XPG1_1243 PF12792 CSS motif domain associated with EAL XPG1_1245 PF00990 Diguanylate cyclase, GGDEF domain XPG1_1245 PF17152 Periplasmic sensor domain XPG1_1246 PF13689 YfiR/HmsC-like XPG1_1248 PF00535 Glycosyl transferase family 2 XPG1_1249 PF01522 Polysaccharide deacetylase XPG1_1249 PF14883 Hypothetical glycosyl hydrolase family 13 XPG1_1253 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XPG1_1253 PF16582 Middle domain of thiamine pyrophosphate XPG1_1253 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XPG1_1254 PF12697 Alpha/beta hydrolase family XPG1_1255 PF00378 Enoyl-CoA hydratase/isomerase XPG1_1256 PF13378 Enolase C-terminal domain-like XPG1_1257 PF13193 AMP-binding enzyme C-terminal domain XPG1_1257 PF00501 AMP-binding enzyme XPG1_1259 PF03222 Tryptophan/tyrosine permease family XPG1_1260 PF07690 Major Facilitator Superfamily XPG1_1262 PF01381 Helix-turn-helix XPG1_1267 PF01555 DNA methylase XPG1_1271 PF12762 ISXO2-like transposase domain XPG1_1276 PF00884 Sulfatase XPG1_1276 PF11893 Domain of unknown function (DUF3413) XPG1_1277 PF07208 Protein of unknown function (DUF1414) XPG1_1278 PF04245 37-kD nucleoid-associated bacterial protein XPG1_1279 PF01386 Ribosomal L25p family XPG1_1280 PF04851 Type III restriction enzyme, res subunit XPG1_1280 PF00271 Helicase conserved C-terminal domain XPG1_1281 PF00849 RNA pseudouridylate synthase XPG1_1281 PF01479 S4 domain XPG1_1282 PF07690 Major Facilitator Superfamily XPG1_1283 PF13989 YejG-like protein XPG1_1285 PF00877 NlpC/P60 family XPG1_1286 PF01569 PAP2 superfamily XPG1_1289 PF08207 Elongation factor P (EF-P) KOW-like domain XPG1_1289 PF01132 Elongation factor P (EF-P) OB domain XPG1_1289 PF09285 Elongation factor P, C-terminal XPG1_1290 PF03222 Tryptophan/tyrosine permease family XPG1_1291 PF00294 pfkB family carbohydrate kinase XPG1_1292 PF01261 Xylose isomerase-like TIM barrel XPG1_1293 PF03601 Conserved hypothetical protein 698 XPG1_1295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_1295 PF03466 LysR substrate binding domain XPG1_1296 PF00324 Amino acid permease XPG1_1298 PF01032 FecCD transport family XPG1_1299 PF00005 ABC transporter XPG1_1300 PF00593 TonB dependent receptor XPG1_1300 PF07715 TonB-dependent Receptor Plug Domain XPG1_1302 PF13520 Amino acid permease XPG1_1303 PF09330 D-lactate dehydrogenase, membrane binding XPG1_1303 PF01565 FAD binding domain XPG1_1304 PF00929 Exonuclease XPG1_1304 PF08411 Exonuclease C-terminal XPG1_1307 PF04363 Protein of unknown function (DUF496) XPG1_1308 PF13460 NAD(P)H-binding XPG1_1309 PF00575 S1 RNA binding domain XPG1_1309 PF10150 Ribonuclease E/G family XPG1_1309 PF12111 Polyribonucleotide phosphorylase C terminal XPG1_1311 PF01479 S4 domain XPG1_1311 PF00849 RNA pseudouridylate synthase XPG1_1312 PF02545 Maf-like protein XPG1_1313 PF02620 Large ribosomal RNA subunit accumulation protein YceD XPG1_1314 PF01783 Ribosomal L32p protein family XPG1_1315 PF02504 Fatty acid synthesis protein XPG1_1316 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XPG1_1316 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XPG1_1317 PF00698 Acyl transferase domain XPG1_1319 PF00550 Phosphopantetheine attachment site XPG1_1320 PF02801 Beta-ketoacyl synthase, C-terminal domain XPG1_1320 PF00109 Beta-ketoacyl synthase, N-terminal domain XPG1_1321 PF01063 Amino-transferase class IV XPG1_1322 PF02618 YceG-like family XPG1_1323 PF02223 Thymidylate kinase XPG1_1324 PF09115 DNA polymerase III, delta subunit, C terminal XPG1_1325 PF01026 TatD related DNase XPG1_1326 PF01230 HIT domain XPG1_1327 PF13036 Peptidoglycan-synthase activator LpoB XPG1_1328 PF01636 Phosphotransferase enzyme family XPG1_1329 PF00933 Glycosyl hydrolase family 3 N terminal domain XPG1_1330 PF07992 Pyridine nucleotide-disulphide oxidoreductase XPG1_1336 PF12951 Passenger-associated-transport-repeat XPG1_1340 PF00271 Helicase conserved C-terminal domain XPG1_1340 PF00270 DEAD/DEAH box helicase XPG1_1340 PF03461 TRCF domain XPG1_1340 PF17757 UvrB interaction domain XPG1_1340 PF02559 CarD-like/TRCF domain XPG1_1343 PF02687 FtsX-like permease family XPG1_1343 PF12704 MacB-like periplasmic core domain XPG1_1344 PF00005 ABC transporter XPG1_1345 PF12704 MacB-like periplasmic core domain XPG1_1345 PF02687 FtsX-like permease family XPG1_1346 PF02146 Sir2 family XPG1_1347 PF01546 Peptidase family M20/M25/M40 XPG1_1347 PF07687 Peptidase dimerisation domain XPG1_1348 PF08007 Cupin superfamily protein XPG1_1349 PF13419 Haloacid dehalogenase-like hydrolase XPG1_1350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XPG1_1350 PF08918 PhoQ Sensor XPG1_1351 PF00486 Transcriptional regulatory protein, C terminal XPG1_1351 PF00072 Response regulator receiver domain XPG1_1354 PF08328 Adenylosuccinate lyase C-terminal XPG1_1354 PF00206 Lyase XPG1_1355 PF04356 Protein of unknown function (DUF489) XPG1_1357 PF00849 RNA pseudouridylate synthase XPG1_1359 PF00180 Isocitrate/isopropylmalate dehydrogenase XPG1_1360 PF00589 Phage integrase family XPG1_1360 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain XPG1_1365 PF00436 Single-strand binding protein family XPG1_1366 PF03837 RecT family XPG1_1367 PF12684 PDDEXK-like domain of unknown function (DUF3799) XPG1_1367 PF06630 Enterobacterial exodeoxyribonuclease VIII XPG1_1378 PF00717 Peptidase S24-like XPG1_1378 PF01381 Helix-turn-helix XPG1_1394 PF03245 Bacteriophage Rz lysis protein XPG1_1399 PF17288 Terminase RNAseH like domain XPG1_1399 PF04466 Phage terminase large subunit XPG1_1403 PF04233 Phage Mu protein F like protein XPG1_1427 PF00180 Isocitrate/isopropylmalate dehydrogenase XPG1_1433 PF01235 Sodium:alanine symporter family XPG1_1434 PF06445 GyrI-like small molecule binding domain XPG1_1434 PF12833 Helix-turn-helix domain XPG1_1435 PF00324 Amino acid permease XPG1_1437 PF00313 'Cold-shock' DNA-binding domain XPG1_1438 PF08543 Phosphomethylpyrimidine kinase XPG1_1439 PF01791 DeoC/LacD family aldolase XPG1_1441 PF07690 Major Facilitator Superfamily XPG1_1442 PF00486 Transcriptional regulatory protein, C terminal XPG1_1442 PF00072 Response regulator receiver domain XPG1_1443 PF00512 His Kinase A (phospho-acceptor) domain XPG1_1443 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XPG1_1443 PF00672 HAMP domain XPG1_1444 PF00873 AcrB/AcrD/AcrF family XPG1_1445 PF00873 AcrB/AcrD/AcrF family XPG1_1446 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XPG1_1448 PF00571 CBS domain XPG1_1448 PF01769 Divalent cation transporter XPG1_1448 PF03448 MgtE intracellular N domain XPG1_1449 PF02541 Ppx/GppA phosphatase family XPG1_1450 PF13089 Polyphosphate kinase N-terminal domain XPG1_1450 PF17941 Polyphosphate kinase C-terminal domain 1 XPG1_1450 PF13090 Polyphosphate kinase C-terminal domain 2 XPG1_1450 PF02503 Polyphosphate kinase middle domain XPG1_1451 PF13302 Acetyltransferase (GNAT) domain XPG1_1452 PF00551 Formyl transferase XPG1_1453 PF02769 AIR synthase related protein, C-terminal domain XPG1_1453 PF00586 AIR synthase related protein, N-terminal domain XPG1_1455 PF00860 Permease family XPG1_1456 PF00308 Bacterial dnaA protein XPG1_1457 PF03960 ArsC family XPG1_1458 PF07720 Tetratricopeptide repeat XPG1_1458 PF01435 Peptidase family M48 XPG1_1459 PF00578 AhpC/TSA family XPG1_1460 PF01842 ACT domain XPG1_1461 PF00701 Dihydrodipicolinate synthetase family XPG1_1463 PF06804 NlpB/DapX lipoprotein XPG1_1464 PF01259 SAICAR synthetase XPG1_1468 PF04284 Protein of unknown function (DUF441) XPG1_1469 PF17176 tRNA-binding domain XPG1_1469 PF13718 GNAT acetyltransferase 2 XPG1_1469 PF05127 Helicase XPG1_1469 PF08351 Domain of unknown function (DUF1726) XPG1_1470 PF13980 Uncharacterised protein family (UPF0370) XPG1_1471 PF02557 D-alanyl-D-alanine carboxypeptidase XPG1_1472 PF07687 Peptidase dimerisation domain XPG1_1472 PF01546 Peptidase family M20/M25/M40 XPG1_1473 PF03960 ArsC family XPG1_1474 PF00072 Response regulator receiver domain XPG1_1474 PF00196 Bacterial regulatory proteins, luxR family XPG1_1475 PF00390 Malic enzyme, N-terminal domain XPG1_1475 PF03949 Malic enzyme, NAD binding domain XPG1_1475 PF01515 Phosphate acetyl/butaryl transferase XPG1_1477 PF13742 OB-fold nucleic acid binding domain XPG1_1477 PF02601 Exonuclease VII, large subunit XPG1_1478 PF00571 CBS domain XPG1_1478 PF00478 IMP dehydrogenase / GMP reductase domain XPG1_1479 PF02540 NAD synthase XPG1_1479 PF00958 GMP synthase C terminal domain XPG1_1479 PF00117 Glutamine amidotransferase class-I XPG1_1480 PF13356 Arm DNA-binding domain XPG1_1480 PF00589 Phage integrase family XPG1_1484 PF03400 IS1 transposase XPG1_1485 PF03811 InsA N-terminal domain XPG1_1485 PF12759 InsA C-terminal domain XPG1_1497 PF07690 Major Facilitator Superfamily XPG1_1498 PF00196 Bacterial regulatory proteins, luxR family XPG1_1498 PF00072 Response regulator receiver domain XPG1_1499 PF07730 Histidine kinase XPG1_1499 PF05231 MASE1 XPG1_1499 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XPG1_1500 PF07690 Major Facilitator Superfamily XPG1_1502 PF13847 Methyltransferase domain XPG1_1503 PF02659 Putative manganese efflux pump XPG1_1505 PF06173 Protein of unknown function (DUF986) XPG1_1506 PF03613 PTS system mannose/fructose/sorbose family IID component XPG1_1507 PF03609 PTS system sorbose-specific iic component XPG1_1508 PF03830 PTS system sorbose subfamily IIB component XPG1_1508 PF03610 PTS system fructose IIA component XPG1_1509 PF03313 Serine dehydratase alpha chain XPG1_1509 PF03315 Serine dehydratase beta chain XPG1_1510 PF00293 NUDIX domain XPG1_1511 PF00425 chorismate binding enzyme XPG1_1511 PF04715 Anthranilate synthase component I, N terminal region XPG1_1512 PF03701 Uncharacterised protein family (UPF0181) XPG1_1513 PF13995 YebF-like protein XPG1_1514 PF00561 alpha/beta hydrolase fold XPG1_1515 PF06440 DNA polymerase III, theta subunit XPG1_1516 PF00210 Ferritin-like domain XPG1_1517 PF04234 CopC domain XPG1_1518 PF05425 Copper resistance protein D XPG1_1519 PF10709 Protein of unknown function (DUF2511) XPG1_1521 PF13185 GAF domain XPG1_1522 PF04352 ProQ/FINO family XPG1_1522 PF17516 ProQ C-terminal domain XPG1_1523 PF17804 Tail specific protease N-terminal domain XPG1_1523 PF11818 C-terminal domain of tail specific protease (DUF3340) XPG1_1523 PF00595 PDZ domain XPG1_1523 PF03572 Peptidase family S41 XPG1_1525 PF01435 Peptidase family M48 XPG1_1527 PF04307 LexA-binding, inner membrane-associated putative hydrolase XPG1_1528 PF13419 Haloacid dehalogenase-like hydrolase XPG1_1530 PF00950 ABC 3 transport family XPG1_1531 PF00950 ABC 3 transport family XPG1_1532 PF00005 ABC transporter XPG1_1533 PF01297 Zinc-uptake complex component A periplasmic XPG1_1534 PF01464 Transglycosylase SLT domain XPG1_1537 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XPG1_1537 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XPG1_1537 PF02824 TGS domain XPG1_1537 PF03129 Anticodon binding domain XPG1_1538 PF05198 Translation initiation factor IF-3, N-terminal domain XPG1_1538 PF00707 Translation initiation factor IF-3, C-terminal domain XPG1_1539 PF01632 Ribosomal protein L35 XPG1_1540 PF00453 Ribosomal protein L20 XPG1_1541 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain XPG1_1541 PF01409 tRNA synthetases class II core domain (F) XPG1_1542 PF03147 Ferredoxin-fold anticodon binding domain XPG1_1542 PF01588 Putative tRNA binding domain XPG1_1542 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain XPG1_1542 PF03483 B3/4 domain XPG1_1542 PF03484 tRNA synthetase B5 domain XPG1_1543 PF00216 Bacterial DNA-binding protein XPG1_1544 PF01032 FecCD transport family XPG1_1545 PF00005 ABC transporter XPG1_1546 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XPG1_1547 PF00535 Glycosyl transferase family 2 XPG1_1548 PF01370 NAD dependent epimerase/dehydratase family XPG1_1548 PF02911 Formyl transferase, C-terminal domain XPG1_1548 PF00551 Formyl transferase XPG1_1549 PF01522 Polysaccharide deacetylase XPG1_1550 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase XPG1_1551 PF00892 EamA-like transporter family XPG1_1553 PF00877 NlpC/P60 family XPG1_1554 PF00005 ABC transporter XPG1_1556 PF01032 FecCD transport family XPG1_1557 PF01497 Periplasmic binding protein XPG1_1558 PF05171 Haemin-degrading HemS.ChuX domain XPG1_1559 PF07715 TonB-dependent Receptor Plug Domain XPG1_1559 PF00593 TonB dependent receptor XPG1_1563 PF00793 DAHP synthetase I family XPG1_1564 PF03618 Kinase/pyrophosphorylase XPG1_1565 PF00391 PEP-utilising enzyme, mobile domain XPG1_1565 PF02896 PEP-utilising enzyme, TIM barrel domain XPG1_1565 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain XPG1_1566 PF01594 AI-2E family transporter XPG1_1569 PF13183 4Fe-4S dicluster domain XPG1_1569 PF02913 FAD linked oxidases, C-terminal domain XPG1_1569 PF01565 FAD binding domain XPG1_1570 PF03061 Thioesterase superfamily XPG1_1571 PF01476 LysM domain XPG1_1571 PF03734 L,D-transpeptidase catalytic domain XPG1_1571 PF17969 L,D-transpeptidase C-terminal domain XPG1_1572 PF04728 Lipoprotein leucine-zipper XPG1_1574 PF02887 Pyruvate kinase, alpha/beta domain XPG1_1574 PF00224 Pyruvate kinase, barrel domain XPG1_1575 PF01554 MatE XPG1_1577 PF00677 Lumazine binding domain XPG1_1579 PF07690 Major Facilitator Superfamily XPG1_1580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_1580 PF03466 LysR substrate binding domain XPG1_1581 PF00356 Bacterial regulatory proteins, lacI family XPG1_1582 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XPG1_1582 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XPG1_1583 PF00462 Glutaredoxin XPG1_1584 PF00929 Exonuclease XPG1_1585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XPG1_1586 PF01047 MarR family XPG1_1587 PF05433 Glycine zipper 2TM domain XPG1_1588 PF03702 Anhydro-N-acetylmuramic acid kinase XPG1_1589 PF01243 Pyridoxamine 5'-phosphate oxidase XPG1_1589 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region XPG1_1590 PF00579 tRNA synthetases class I (W and Y) XPG1_1590 PF01479 S4 domain XPG1_1591 PF08543 Phosphomethylpyrimidine kinase XPG1_1593 PF00005 ABC transporter XPG1_1594 PF00005 ABC transporter XPG1_1594 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XPG1_1595 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_1595 PF12911 N-terminal TM domain of oligopeptide transport permease C XPG1_1596 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_1597 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XPG1_1598 PF00158 Sigma-54 interaction domain XPG1_1598 PF02954 Bacterial regulatory protein, Fis family XPG1_1600 PF04012 PspA/IM30 family XPG1_1601 PF06667 Phage shock protein B XPG1_1602 PF04024 PspC domain XPG1_1603 PF04317 YcjX-like family, DUF463 XPG1_1604 PF05128 Domain of unknown function (DUF697) XPG1_1606 PF18024 Helix-turn-helix domain XPG1_1606 PF00158 Sigma-54 interaction domain XPG1_1608 PF08534 Redoxin XPG1_1609 PF01544 CorA-like Mg2+ transporter protein XPG1_1610 PF01171 PP-loop family XPG1_1612 PF00550 Phosphopantetheine attachment site XPG1_1612 PF13193 AMP-binding enzyme C-terminal domain XPG1_1612 PF00668 Condensation domain XPG1_1612 PF00501 AMP-binding enzyme XPG1_1613 PF00550 Phosphopantetheine attachment site XPG1_1613 PF00668 Condensation domain XPG1_1613 PF00501 AMP-binding enzyme XPG1_1613 PF13193 AMP-binding enzyme C-terminal domain XPG1_1616 PF00664 ABC transporter transmembrane region XPG1_1616 PF00005 ABC transporter XPG1_1619 PF02600 Disulfide bond formation protein DsbB XPG1_1620 PF06450 Bacterial Na+/H+ antiporter B (NhaB) XPG1_1621 PF00392 Bacterial regulatory proteins, gntR family XPG1_1621 PF07840 FadR C-terminal domain XPG1_1623 PF01266 FAD dependent oxidoreductase XPG1_1624 PF00842 Alanine racemase, C-terminal domain XPG1_1624 PF01168 Alanine racemase, N-terminal domain XPG1_1625 PF01263 Aldose 1-epimerase XPG1_1626 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XPG1_1626 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XPG1_1627 PF01641 SelR domain XPG1_1628 PF07023 Protein of unknown function (DUF1315) XPG1_1631 PF00857 Isochorismatase family XPG1_1632 PF17763 Glutaminase/Asparaginase C-terminal domain XPG1_1632 PF00710 Asparaginase, N-terminal XPG1_1633 PF01343 Peptidase family S49 XPG1_1634 PF00881 Nitroreductase family XPG1_1635 PF02769 AIR synthase related protein, C-terminal domain XPG1_1635 PF00586 AIR synthase related protein, N-terminal domain XPG1_1635 PF02769 AIR synthase related protein, C-terminal domain XPG1_1635 PF00586 AIR synthase related protein, N-terminal domain XPG1_1636 PF01751 Toprim domain XPG1_1636 PF01131 DNA topoisomerase XPG1_1637 PF03372 Endonuclease/Exonuclease/phosphatase family XPG1_1640 PF00551 Formyl transferase XPG1_1640 PF01842 ACT domain XPG1_1641 PF02810 SEC-C motif XPG1_1642 PF00483 Nucleotidyl transferase XPG1_1643 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XPG1_1643 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XPG1_1643 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XPG1_1644 PF01370 NAD dependent epimerase/dehydratase family XPG1_1645 PF00816 H-NS histone family XPG1_1647 PF00265 Thymidine kinase XPG1_1648 PF00465 Iron-containing alcohol dehydrogenase XPG1_1648 PF00171 Aldehyde dehydrogenase family XPG1_1649 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XPG1_1650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XPG1_1651 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_1652 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_1652 PF12911 N-terminal TM domain of oligopeptide transport permease C XPG1_1653 PF00005 ABC transporter XPG1_1653 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XPG1_1654 PF00005 ABC transporter XPG1_1654 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XPG1_1655 PF04269 Protein of unknown function, DUF440 XPG1_1656 PF13091 PLD-like domain XPG1_1656 PF13396 Phospholipase_D-nuclease N-terminal XPG1_1658 PF03544 Gram-negative bacterial TonB protein C-terminal XPG1_1659 PF03061 Thioesterase superfamily XPG1_1660 PF04279 Intracellular septation protein A XPG1_1662 PF03922 OmpW family XPG1_1663 PF00290 Tryptophan synthase alpha chain XPG1_1664 PF00291 Pyridoxal-phosphate dependent enzyme XPG1_1665 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase XPG1_1665 PF00218 Indole-3-glycerol phosphate synthase XPG1_1666 PF00591 Glycosyl transferase family, a/b domain XPG1_1666 PF02885 Glycosyl transferase family, helical bundle domain XPG1_1667 PF00117 Glutamine amidotransferase class-I XPG1_1668 PF04715 Anthranilate synthase component I, N terminal region XPG1_1668 PF00425 chorismate binding enzyme XPG1_1669 PF02811 PHP domain XPG1_1670 PF01300 Telomere recombination XPG1_1671 PF01479 S4 domain XPG1_1671 PF00849 RNA pseudouridylate synthase XPG1_1672 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP XPG1_1673 PF00106 short chain dehydrogenase XPG1_1674 PF01343 Peptidase family S49 XPG1_1674 PF08496 Peptidase family S49 N-terminal XPG1_1675 PF10692 Protein of unknown function (DUF2498) XPG1_1676 PF01751 Toprim domain XPG1_1676 PF01396 Topoisomerase DNA binding C4 zinc finger XPG1_1676 PF01131 DNA topoisomerase XPG1_1676 PF08272 Topoisomerase I zinc-ribbon-like XPG1_1677 PF03466 LysR substrate binding domain XPG1_1677 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_1679 PF00330 Aconitase family (aconitate hydratase) XPG1_1679 PF00694 Aconitase C-terminal domain XPG1_1680 PF00925 GTP cyclohydrolase II XPG1_1681 PF06305 Lipopolysaccharide assembly protein A domain XPG1_1682 PF18073 Rubredoxin metal binding domain XPG1_1683 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family XPG1_1684 PF01253 Translation initiation factor SUI1 XPG1_1686 PF08206 Ribonuclease B OB domain XPG1_1686 PF00575 S1 RNA binding domain XPG1_1686 PF17876 Cold shock domain XPG1_1686 PF00773 RNB domain XPG1_1687 PF10576 Iron-sulfur binding domain of endonuclease III XPG1_1687 PF00633 Helix-hairpin-helix motif XPG1_1687 PF00730 HhH-GPD superfamily base excision DNA repair protein XPG1_1688 PF02508 Rnf-Nqr subunit, membrane protein XPG1_1689 PF04205 FMN-binding domain XPG1_1690 PF03116 NQR2, RnfD, RnfE family XPG1_1691 PF10531 SLBB domain XPG1_1691 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit XPG1_1691 PF13375 RnfC Barrel sandwich hybrid domain XPG1_1691 PF12838 4Fe-4S dicluster domain XPG1_1692 PF04060 Putative Fe-S cluster XPG1_1693 PF02508 Rnf-Nqr subunit, membrane protein XPG1_1694 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XPG1_1694 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XPG1_1695 PF13593 SBF-like CPA transporter family (DUF4137) XPG1_1696 PF00962 Adenosine/AMP deaminase XPG1_1697 PF06097 Bacterial protein of unknown function (DUF945) XPG1_1698 PF01238 Phosphomannose isomerase type I XPG1_1699 PF00206 Lyase XPG1_1699 PF10415 Fumarase C C-terminus XPG1_1700 PF05472 DNA replication terminus site-binding protein (Ter protein) XPG1_1702 PF07690 Major Facilitator Superfamily XPG1_1703 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_1703 PF03466 LysR substrate binding domain XPG1_1705 PF01375 Heat-labile enterotoxin alpha chain XPG1_1706 PF00480 ROK family XPG1_1709 PF06932 Protein of unknown function (DUF1283) XPG1_1710 PF00106 short chain dehydrogenase XPG1_1711 PF00005 ABC transporter XPG1_1711 PF00664 ABC transporter transmembrane region XPG1_1718 PF03958 Bacterial type II/III secretion system short domain XPG1_1718 PF00263 Bacterial type II and III secretion system protein XPG1_1727 PF12833 Helix-turn-helix domain XPG1_1727 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XPG1_1727 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XPG1_1727 PF02805 Metal binding domain of Ada XPG1_1730 PF07690 Major Facilitator Superfamily XPG1_1732 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_1732 PF03466 LysR substrate binding domain XPG1_1734 PF01810 LysE type translocator XPG1_1737 PF00593 TonB dependent receptor XPG1_1737 PF07715 TonB-dependent Receptor Plug Domain XPG1_1740 PF00892 EamA-like transporter family XPG1_1742 PF00583 Acetyltransferase (GNAT) family XPG1_1746 PF00027 Cyclic nucleotide-binding domain XPG1_1746 PF00325 Bacterial regulatory proteins, crp family XPG1_1747 PF00582 Universal stress protein family XPG1_1748 PF00589 Phage integrase family XPG1_1748 PF02899 Phage integrase, N-terminal SAM-like domain XPG1_1752 PF01609 Transposase DDE domain XPG1_1752 PF13808 DDE_Tnp_1-associated XPG1_1753 PF02567 Phenazine biosynthesis-like protein XPG1_1754 PF00392 Bacterial regulatory proteins, gntR family XPG1_1754 PF00155 Aminotransferase class I and II XPG1_1755 PF07690 Major Facilitator Superfamily XPG1_1760 PF02233 NAD(P) transhydrogenase beta subunit XPG1_1761 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch XPG1_1761 PF05222 Alanine dehydrogenase/PNT, N-terminal domain XPG1_1761 PF01262 Alanine dehydrogenase/PNT, C-terminal domain XPG1_1762 PF07338 Protein of unknown function (DUF1471) XPG1_1763 PF13520 Amino acid permease XPG1_1765 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain XPG1_1765 PF02753 Pili assembly chaperone PapD, C-terminal domain XPG1_1766 PF13953 PapC C-terminal domain XPG1_1766 PF13954 PapC N-terminal domain XPG1_1766 PF00577 Outer membrane usher protein XPG1_1770 PF00005 ABC transporter XPG1_1770 PF12704 MacB-like periplasmic core domain XPG1_1770 PF02687 FtsX-like permease family XPG1_1771 PF00005 ABC transporter XPG1_1774 PF02627 Carboxymuconolactone decarboxylase family XPG1_1778 PF11898 Domain of unknown function (DUF3418) XPG1_1778 PF04408 Helicase associated domain (HA2) XPG1_1778 PF00270 DEAD/DEAH box helicase XPG1_1778 PF00271 Helicase conserved C-terminal domain XPG1_1778 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold XPG1_1779 PF02525 Flavodoxin-like fold XPG1_1780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XPG1_1780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XPG1_1783 PF03692 Putative zinc- or iron-chelating domain XPG1_1784 PF01557 Fumarylacetoacetate (FAA) hydrolase family XPG1_1785 PF13406 Transglycosylase SLT domain XPG1_1786 PF05166 YcgL domain XPG1_1788 PF05209 Septum formation inhibitor MinC, N-terminal domain XPG1_1788 PF03775 Septum formation inhibitor MinC, C-terminal domain XPG1_1789 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XPG1_1790 PF03776 Septum formation topological specificity factor MinE XPG1_1791 PF01612 3'-5' exonuclease XPG1_1791 PF00570 HRDC domain XPG1_1792 PF00501 AMP-binding enzyme XPG1_1792 PF13193 AMP-binding enzyme C-terminal domain XPG1_1793 PF00814 Glycoprotease family XPG1_1794 PF04851 Type III restriction enzyme, res subunit XPG1_1794 PF13307 Helicase C-terminal domain XPG1_1795 PF01042 Endoribonuclease L-PSP XPG1_1796 PF00893 Small Multidrug Resistance protein XPG1_1797 PF00893 Small Multidrug Resistance protein XPG1_1798 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XPG1_1798 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XPG1_1800 PF01380 SIS domain XPG1_1800 PF01418 Helix-turn-helix domain, rpiR family XPG1_1802 PF00224 Pyruvate kinase, barrel domain XPG1_1802 PF02887 Pyruvate kinase, alpha/beta domain XPG1_1803 PF03279 Bacterial lipid A biosynthesis acyltransferase XPG1_1804 PF01476 LysM domain XPG1_1804 PF08525 Opacity-associated protein A N-terminal motif XPG1_1804 PF01551 Peptidase family M23 XPG1_1805 PF01297 Zinc-uptake complex component A periplasmic XPG1_1806 PF00005 ABC transporter XPG1_1807 PF00950 ABC 3 transport family XPG1_1810 PF05496 Holliday junction DNA helicase RuvB P-loop domain XPG1_1810 PF05491 RuvB C-terminal winged helix domain XPG1_1810 PF17864 RuvB AAA lid domain XPG1_1811 PF07499 RuvA, C-terminal domain XPG1_1811 PF01330 RuvA N terminal domain XPG1_1812 PF02075 Crossover junction endodeoxyribonuclease RuvC XPG1_1813 PF01709 Transcriptional regulator XPG1_1814 PF00293 NUDIX domain XPG1_1815 PF00152 tRNA synthetases class II (D, K and N) XPG1_1815 PF01336 OB-fold nucleic acid binding domain XPG1_1815 PF02938 GAD domain XPG1_1816 PF01124 MAPEG family XPG1_1817 PF13649 Methyltransferase domain XPG1_1818 PF08003 Protein of unknown function (DUF1698) XPG1_1819 PF03932 CutC family XPG1_1820 PF06185 YecM protein XPG1_1821 PF03485 Arginyl tRNA synthetase N terminal domain XPG1_1821 PF05746 DALR anticodon binding domain XPG1_1821 PF00750 tRNA synthetases class I (R) XPG1_1822 PF03023 Lipid II flippase MurJ XPG1_1825 PF07690 Major Facilitator Superfamily XPG1_1828 PF16671 Actin cross-linking domain XPG1_1828 PF04717 Type VI secretion system, phage-baseplate injector XPG1_1846 PF00004 ATPase family associated with various cellular activities (AAA) XPG1_1846 PF07724 AAA domain (Cdc48 subfamily) XPG1_1846 PF17871 AAA lid domain XPG1_1846 PF10431 C-terminal, D2-small domain, of ClpB protein XPG1_1848 PF03793 PASTA domain XPG1_1848 PF00069 Protein kinase domain XPG1_1849 PF13302 Acetyltransferase (GNAT) domain XPG1_1850 PF07273 Protein of unknown function (DUF1439) XPG1_1851 PF02613 Nitrate reductase delta subunit XPG1_1852 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XPG1_1858 PF13808 DDE_Tnp_1-associated XPG1_1858 PF01609 Transposase DDE domain XPG1_1859 PF13808 DDE_Tnp_1-associated XPG1_1859 PF01609 Transposase DDE domain XPG1_1861 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_1861 PF03466 LysR substrate binding domain XPG1_1864 PF07690 Major Facilitator Superfamily XPG1_1865 PF03811 InsA N-terminal domain XPG1_1865 PF12759 InsA C-terminal domain XPG1_1867 PF00925 GTP cyclohydrolase II XPG1_1868 PF01609 Transposase DDE domain XPG1_1868 PF13808 DDE_Tnp_1-associated XPG1_1872 PF03400 IS1 transposase XPG1_1875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XPG1_1876 PF13280 WYL domain XPG1_1876 PF08279 HTH domain XPG1_1884 PF01740 STAS domain XPG1_1884 PF00916 Sulfate permease family XPG1_1885 PF00793 DAHP synthetase I family XPG1_1886 PF13369 Transglutaminase-like superfamily XPG1_1887 PF17827 PrmC N-terminal domain XPG1_1887 PF13847 Methyltransferase domain XPG1_1888 PF03462 PCRF domain XPG1_1888 PF00472 RF-1 domain XPG1_1889 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain XPG1_1889 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain XPG1_1889 PF01488 Shikimate / quinate 5-dehydrogenase XPG1_1891 PF03550 Outer membrane lipoprotein LolB XPG1_1892 PF08544 GHMP kinases C terminal XPG1_1892 PF00288 GHMP kinases N terminal domain XPG1_1893 PF14572 Phosphoribosyl synthetase-associated domain XPG1_1893 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase XPG1_1894 PF00657 GDSL-like Lipase/Acylhydrolase XPG1_1894 PF03797 Autotransporter beta-domain XPG1_1895 PF03797 Autotransporter beta-domain XPG1_1895 PF00657 GDSL-like Lipase/Acylhydrolase XPG1_1897 PF01195 Peptidyl-tRNA hydrolase XPG1_1898 PF06071 Protein of unknown function (DUF933) XPG1_1898 PF01926 50S ribosome-binding GTPase XPG1_1901 PF00561 alpha/beta hydrolase fold XPG1_1901 PF00364 Biotin-requiring enzyme XPG1_1904 PF01266 FAD dependent oxidoreductase XPG1_1906 PF00155 Aminotransferase class I and II XPG1_1906 PF00392 Bacterial regulatory proteins, gntR family XPG1_1908 PF01654 Cytochrome bd terminal oxidase subunit I XPG1_1909 PF02322 Cytochrome bd terminal oxidase subunit II XPG1_1910 PF04231 Endonuclease I XPG1_1911 PF00582 Universal stress protein family XPG1_1912 PF00582 Universal stress protein family XPG1_1914 PF00857 Isochorismatase family XPG1_1920 PF13520 Amino acid permease XPG1_1921 PF01276 Orn/Lys/Arg decarboxylase, major domain XPG1_1921 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain XPG1_1921 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain XPG1_1922 PF05106 Phage holin family (Lysis protein S) XPG1_1925 PF00282 Pyridoxal-dependent decarboxylase conserved domain XPG1_1926 PF01177 Asp/Glu/Hydantoin racemase XPG1_1927 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_1927 PF03466 LysR substrate binding domain XPG1_1928 PF00375 Sodium:dicarboxylate symporter family XPG1_1930 PF06610 L-alanine exporter XPG1_1931 PF08361 MAATS-type transcriptional repressor, C-terminal region XPG1_1931 PF00440 Bacterial regulatory proteins, tetR family XPG1_1932 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XPG1_1932 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XPG1_1933 PF07690 Major Facilitator Superfamily XPG1_1934 PF13808 DDE_Tnp_1-associated XPG1_1934 PF01609 Transposase DDE domain XPG1_1939 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XPG1_1945 PF07690 Major Facilitator Superfamily XPG1_1947 PF00440 Bacterial regulatory proteins, tetR family XPG1_1950 PF13700 Domain of unknown function (DUF4158) XPG1_1950 PF01526 Tn3 transposase DDE domain XPG1_1951 PF03222 Tryptophan/tyrosine permease family XPG1_1952 PF00665 Integrase core domain XPG1_1952 PF13936 Helix-turn-helix domain XPG1_1958 PF01797 Transposase IS200 like XPG1_1962 PF14706 Transposase DNA-binding XPG1_1962 PF02281 Transposase Tn5 dimerisation domain XPG1_1962 PF01609 Transposase DDE domain XPG1_1970 PF00291 Pyridoxal-phosphate dependent enzyme XPG1_1971 PF03400 IS1 transposase XPG1_1996 PF13693 Winged helix-turn-helix DNA-binding XPG1_1997 PF03354 Phage Terminase XPG1_2016 PF00145 C-5 cytosine-specific DNA methylase XPG1_2016 PF12728 Helix-turn-helix domain XPG1_2024 PF01066 CDP-alcohol phosphatidyltransferase XPG1_2025 PF08459 UvrC Helix-hairpin-helix N-terminal XPG1_2025 PF02151 UvrB/uvrC motif XPG1_2025 PF01541 GIY-YIG catalytic domain XPG1_2026 PF00072 Response regulator receiver domain XPG1_2026 PF00196 Bacterial regulatory proteins, luxR family XPG1_2031 PF00324 Amino acid permease XPG1_2032 PF00474 Sodium:solute symporter family XPG1_2033 PF00171 Aldehyde dehydrogenase family XPG1_2033 PF01619 Proline dehydrogenase XPG1_2033 PF18327 Proline utilization A proline dehydrogenase N-terminal domain XPG1_2033 PF14850 DNA-binding domain of Proline dehydrogenase XPG1_2034 PF02899 Phage integrase, N-terminal SAM-like domain XPG1_2035 PF04539 Sigma-70 region 3 XPG1_2035 PF04545 Sigma-70, region 4 XPG1_2035 PF04542 Sigma-70 region 2 XPG1_2036 PF00669 Bacterial flagellin N-terminal helical region XPG1_2036 PF00700 Bacterial flagellin C-terminal helical region XPG1_2037 PF07196 Flagellin hook IN motif XPG1_2037 PF07195 Flagellar hook-associated protein 2 C-terminus XPG1_2037 PF02465 Flagellar hook-associated protein 2 N-terminus XPG1_2038 PF02561 Flagellar protein FliS XPG1_2039 PF05400 Flagellar protein FliT XPG1_2040 PF13505 Outer membrane protein beta-barrel domain XPG1_2042 PF02049 Flagellar hook-basal body complex protein FliE XPG1_2043 PF01514 Secretory protein of YscJ/FliF family XPG1_2043 PF08345 Flagellar M-ring protein C-terminal XPG1_2044 PF14841 FliG middle domain XPG1_2044 PF14842 FliG N-terminal domain XPG1_2044 PF01706 FliG C-terminal domain XPG1_2045 PF02108 Flagellar assembly protein FliH XPG1_2046 PF18269 T3SS EscN ATPase C-terminal domain XPG1_2046 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XPG1_2047 PF02050 Flagellar FliJ protein XPG1_2048 PF02120 Flagellar hook-length control protein FliK XPG1_2049 PF03748 Flagellar basal body-associated protein FliL XPG1_2050 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XPG1_2050 PF02154 Flagellar motor switch protein FliM XPG1_2051 PF16973 Flagellar motor switch protein FliN N-terminal XPG1_2051 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XPG1_2052 PF04347 Flagellar biosynthesis protein, FliO XPG1_2053 PF00813 FliP family XPG1_2054 PF01313 Bacterial export proteins, family 3 XPG1_2055 PF01311 Bacterial export proteins, family 1 XPG1_2057 PF00669 Bacterial flagellin N-terminal helical region XPG1_2058 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XPG1_2058 PF00460 Flagella basal body rod protein XPG1_2059 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase XPG1_2059 PF10135 Rod binding protein XPG1_2060 PF02119 Flagellar P-ring protein XPG1_2061 PF02107 Flagellar L-ring protein XPG1_2063 PF00460 Flagella basal body rod protein XPG1_2063 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XPG1_2064 PF00460 Flagella basal body rod protein XPG1_2064 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XPG1_2065 PF00460 Flagella basal body rod protein XPG1_2065 PF07559 Flagellar basal body protein FlaE XPG1_2065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XPG1_2066 PF03963 Flagellar hook capping protein - N-terminal region XPG1_2066 PF13860 FlgD Ig-like domain XPG1_2066 PF13861 FlgD Tudor-like domain XPG1_2067 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XPG1_2067 PF00460 Flagella basal body rod protein XPG1_2068 PF00460 Flagella basal body rod protein XPG1_2070 PF13144 Chaperone for flagella basal body P-ring formation XPG1_2070 PF17656 FlgA N-terminal domain XPG1_2071 PF04316 Anti-sigma-28 factor, FlgM XPG1_2072 PF05130 FlgN protein XPG1_2073 PF00419 Fimbrial protein XPG1_2074 PF02753 Pili assembly chaperone PapD, C-terminal domain XPG1_2074 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain XPG1_2075 PF13954 PapC N-terminal domain XPG1_2075 PF13953 PapC C-terminal domain XPG1_2075 PF00577 Outer membrane usher protein XPG1_2077 PF00419 Fimbrial protein XPG1_2078 PF00771 FHIPEP family XPG1_2079 PF01312 FlhB HrpN YscU SpaS Family XPG1_2080 PF01235 Sodium:alanine symporter family XPG1_2081 PF00561 alpha/beta hydrolase fold XPG1_2082 PF04344 Chemotaxis phosphatase, CheZ XPG1_2083 PF00072 Response regulator receiver domain XPG1_2084 PF01339 CheB methylesterase XPG1_2084 PF00072 Response regulator receiver domain XPG1_2085 PF03705 CheR methyltransferase, all-alpha domain XPG1_2085 PF01739 CheR methyltransferase, SAM binding domain XPG1_2086 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XPG1_2086 PF02203 Tar ligand binding domain homologue XPG1_2086 PF00672 HAMP domain XPG1_2087 PF00672 HAMP domain XPG1_2087 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XPG1_2087 PF02203 Tar ligand binding domain homologue XPG1_2088 PF01584 CheW-like domain XPG1_2089 PF09078 CheY binding XPG1_2089 PF01627 Hpt domain XPG1_2089 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XPG1_2089 PF02895 Signal transducing histidine kinase, homodimeric domain XPG1_2089 PF01584 CheW-like domain XPG1_2090 PF13677 Membrane MotB of proton-channel complex MotA/MotB XPG1_2090 PF00691 OmpA family XPG1_2091 PF01618 MotA/TolQ/ExbB proton channel family XPG1_2092 PF05280 Flagellar transcriptional activator (FlhC) XPG1_2093 PF05247 Flagellar transcriptional activator (FlhD) XPG1_2099 PF02308 MgtC family XPG1_2101 PF00313 'Cold-shock' DNA-binding domain XPG1_2102 PF10777 Inner membrane protein YlaC XPG1_2107 PF01979 Amidohydrolase family XPG1_2108 PF13991 BssS protein family XPG1_2110 PF03279 Bacterial lipid A biosynthesis acyltransferase XPG1_2116 PF02567 Phenazine biosynthesis-like protein XPG1_2117 PF01070 FMN-dependent dehydrogenase XPG1_2118 PF02652 L-lactate permease XPG1_2119 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_2119 PF03466 LysR substrate binding domain XPG1_2120 PF06821 Serine hydrolase XPG1_2122 PF01609 Transposase DDE domain XPG1_2122 PF13808 DDE_Tnp_1-associated XPG1_2126 PF00717 Peptidase S24-like XPG1_2126 PF01381 Helix-turn-helix XPG1_2128 PF13505 Outer membrane protein beta-barrel domain XPG1_2129 PF01638 HxlR-like helix-turn-helix XPG1_2130 PF07690 Major Facilitator Superfamily XPG1_2131 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_2131 PF03466 LysR substrate binding domain XPG1_2134 PF11008 Protein of unknown function (DUF2846) XPG1_2137 PF04358 DsrC like protein XPG1_2139 PF00708 Acylphosphatase XPG1_2140 PF08755 Hemimethylated DNA-binding protein YccV like XPG1_2141 PF13380 CoA binding domain XPG1_2142 PF12462 DNA helicase IV / RNA helicase N terminal XPG1_2142 PF00580 UvrD/REP helicase N-terminal domain XPG1_2142 PF13361 UvrD-like helicase C-terminal domain XPG1_2143 PF12805 FUSC-like inner membrane protein yccS XPG1_2147 PF04994 TfoX C-terminal domain XPG1_2147 PF04993 TfoX N-terminal domain XPG1_2148 PF03846 Cell division inhibitor SulA XPG1_2149 PF00691 OmpA family XPG1_2149 PF01389 OmpA-like transmembrane domain XPG1_2150 PF17414 MatP C-terminal ribbon-helix-helix domain XPG1_2150 PF06303 MatP N-terminal domain XPG1_2151 PF05362 Lon protease (S16) C-terminal proteolytic domain XPG1_2151 PF13654 AAA domain XPG1_2152 PF07977 FabA-like domain XPG1_2153 PF03886 ABC-type transport auxiliary lipoprotein component XPG1_2154 PF02470 MlaD protein XPG1_2155 PF04403 Paraquat-inducible protein A XPG1_2156 PF16326 ABC transporter C-terminal domain XPG1_2156 PF00005 ABC transporter XPG1_2156 PF12848 ABC transporter XPG1_2157 PF10672 S-adenosylmethionine-dependent methyltransferase XPG1_2157 PF02926 THUMP domain XPG1_2157 PF01170 Putative RNA methylase family UPF0020 XPG1_2158 PF03476 MOSC N-terminal beta barrel domain XPG1_2158 PF00111 2Fe-2S iron-sulfur cluster binding domain XPG1_2158 PF03473 MOSC domain XPG1_2159 PF07126 Cell-division protein ZapC XPG1_2161 PF01180 Dihydroorotate dehydrogenase XPG1_2168 PF13276 HTH-like domain XPG1_2168 PF00665 Integrase core domain XPG1_2168 PF13333 Integrase core domain XPG1_2170 PF00392 Bacterial regulatory proteins, gntR family XPG1_2170 PF07729 FCD domain XPG1_2171 PF05035 2-keto-3-deoxy-galactonokinase XPG1_2172 PF01081 KDPG and KHG aldolase XPG1_2173 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XPG1_2173 PF13378 Enolase C-terminal domain-like XPG1_2174 PF07690 Major Facilitator Superfamily XPG1_2175 PF17432 Domain of unknown function (DUF3458_C) ARM repeats XPG1_2175 PF11940 Domain of unknown function (DUF3458) Ig-like fold XPG1_2175 PF01433 Peptidase family M1 domain XPG1_2176 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain XPG1_2176 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family XPG1_2177 PF01336 OB-fold nucleic acid binding domain XPG1_2177 PF00152 tRNA synthetases class II (D, K and N) XPG1_2178 PF13333 Integrase core domain XPG1_2178 PF00665 Integrase core domain XPG1_2178 PF13276 HTH-like domain XPG1_2180 PF00267 Gram-negative porin XPG1_2181 PF00155 Aminotransferase class I and II XPG1_2182 PF13276 HTH-like domain XPG1_2182 PF13333 Integrase core domain XPG1_2182 PF00665 Integrase core domain XPG1_2185 PF00753 Metallo-beta-lactamase superfamily XPG1_2186 PF05951 Bacterial protein of unknown function (DUF882) XPG1_2187 PF01471 Putative peptidoglycan binding domain XPG1_2187 PF03734 L,D-transpeptidase catalytic domain XPG1_2189 PF16330 MukB hinge domain XPG1_2189 PF04310 MukB N-terminal XPG1_2190 PF04288 MukE-like family XPG1_2191 PF03882 MukF winged-helix domain XPG1_2191 PF17193 MukF C-terminal domain XPG1_2191 PF17192 MukF middle domain XPG1_2193 PF02698 DUF218 domain XPG1_2195 PF02348 Cytidylyltransferase XPG1_2196 PF03966 Trm112p-like protein XPG1_2197 PF02606 Tetraacyldisaccharide-1-P 4'-kinase XPG1_2198 PF00005 ABC transporter XPG1_2198 PF00664 ABC transporter transmembrane region XPG1_2199 PF00753 Metallo-beta-lactamase superfamily XPG1_2199 PF03772 Competence protein XPG1_2201 PF00216 Bacterial DNA-binding protein XPG1_2202 PF00575 S1 RNA binding domain XPG1_2203 PF02224 Cytidylate kinase XPG1_2204 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XPG1_2205 PF00266 Aminotransferase class-V XPG1_2206 PF17763 Glutaminase/Asparaginase C-terminal domain XPG1_2206 PF00710 Asparaginase, N-terminal XPG1_2207 PF18381 YcaO cyclodehydratase C-terminal domain XPG1_2207 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding XPG1_2208 PF01226 Formate/nitrite transporter XPG1_2209 PF01228 Glycine radical XPG1_2209 PF02901 Pyruvate formate lyase-like XPG1_2211 PF04055 Radical SAM superfamily XPG1_2215 PF02403 Seryl-tRNA synthetase N-terminal domain XPG1_2215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XPG1_2216 PF16193 AAA C-terminal domain XPG1_2216 PF00004 ATPase family associated with various cellular activities (AAA) XPG1_2216 PF12002 MgsA AAA+ ATPase C terminal XPG1_2217 PF03548 Outer membrane lipoprotein carrier protein LolA XPG1_2218 PF13491 4TM region of DNA translocase FtsK/SpoIIIE XPG1_2218 PF17854 FtsK alpha domain XPG1_2218 PF09397 Ftsk gamma domain XPG1_2218 PF01580 FtsK/SpoIIIE family XPG1_2219 PF01037 Lrp/AsnC ligand binding domain XPG1_2221 PF07992 Pyridine nucleotide-disulphide oxidoreductase XPG1_2222 PF00664 ABC transporter transmembrane region XPG1_2222 PF00005 ABC transporter XPG1_2223 PF00005 ABC transporter XPG1_2223 PF00664 ABC transporter transmembrane region XPG1_2224 PF03588 Leucyl/phenylalanyl-tRNA protein transferase XPG1_2225 PF01176 Translation initiation factor 1A / IF-1 XPG1_2227 PF17871 AAA lid domain XPG1_2227 PF02861 Clp amino terminal domain, pathogenicity island component XPG1_2227 PF07724 AAA domain (Cdc48 subfamily) XPG1_2227 PF10431 C-terminal, D2-small domain, of ClpB protein XPG1_2227 PF00004 ATPase family associated with various cellular activities (AAA) XPG1_2228 PF02617 ATP-dependent Clp protease adaptor protein ClpS XPG1_2230 PF00313 'Cold-shock' DNA-binding domain XPG1_2231 PF02687 FtsX-like permease family XPG1_2231 PF12704 MacB-like periplasmic core domain XPG1_2231 PF00005 ABC transporter XPG1_2232 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XPG1_2233 PF03956 Lysine exporter LysO XPG1_2234 PF00005 ABC transporter XPG1_2235 PF00497 Bacterial extracellular solute-binding proteins, family 3 XPG1_2236 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_2237 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_2238 PF05958 tRNA (Uracil-5-)-methyltransferase XPG1_2239 PF10722 Putative bacterial sensory transduction regulator XPG1_2240 PF07214 Protein of unknown function (DUF1418) XPG1_2242 PF00462 Glutaredoxin XPG1_2243 PF01569 PAP2 superfamily XPG1_2246 PF07943 Penicillin-binding protein 5, C-terminal domain XPG1_2246 PF00768 D-alanyl-D-alanine carboxypeptidase XPG1_2247 PF01370 NAD dependent epimerase/dehydratase family XPG1_2248 PF08029 HisG, C-terminal domain XPG1_2248 PF01634 ATP phosphoribosyltransferase XPG1_2249 PF00815 Histidinol dehydrogenase XPG1_2249 PF00155 Aminotransferase class I and II XPG1_2250 PF00155 Aminotransferase class I and II XPG1_2250 PF00815 Histidinol dehydrogenase XPG1_2251 PF00475 Imidazoleglycerol-phosphate dehydratase XPG1_2252 PF00117 Glutamine amidotransferase class-I XPG1_2253 PF00977 Histidine biosynthesis protein XPG1_2254 PF00977 Histidine biosynthesis protein XPG1_2255 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase XPG1_2255 PF01502 Phosphoribosyl-AMP cyclohydrolase XPG1_2256 PF00465 Iron-containing alcohol dehydrogenase XPG1_2257 PF04073 Aminoacyl-tRNA editing domain XPG1_2259 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XPG1_2259 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain XPG1_2260 PF03741 Integral membrane protein TerC family XPG1_2260 PF00571 CBS domain XPG1_2260 PF03471 Transporter associated domain XPG1_2261 PF05170 AsmA family XPG1_2262 PF00692 dUTPase XPG1_2263 PF00485 Phosphoribulokinase / Uridine kinase family XPG1_2264 PF10609 NUBPL iron-transfer P-loop NTPase XPG1_2265 PF01588 Putative tRNA binding domain XPG1_2265 PF09334 tRNA synthetases class I (M) XPG1_2266 PF03788 LrgA family XPG1_2267 PF04172 LrgB-like family XPG1_2268 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XPG1_2268 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region XPG1_2269 PF03949 Malic enzyme, NAD binding domain XPG1_2269 PF00390 Malic enzyme, N-terminal domain XPG1_2270 PF02698 DUF218 domain XPG1_2271 PF04235 Protein of unknown function (DUF418) XPG1_2272 PF01227 GTP cyclohydrolase I XPG1_2273 PF06779 Uncharacterised MFS-type transporter YbfB XPG1_2275 PF03453 MoeA N-terminal region (domain I and II) XPG1_2275 PF03454 MoeA C-terminal region (domain IV) XPG1_2275 PF00994 Probable molybdopterin binding domain XPG1_2276 PF00899 ThiF family XPG1_2277 PF00005 ABC transporter XPG1_2277 PF12848 ABC transporter XPG1_2278 PF03641 Possible lysine decarboxylase XPG1_2279 PF00892 EamA-like transporter family XPG1_2280 PF08274 PhnA Zinc-Ribbon XPG1_2280 PF03831 PhnA domain XPG1_2283 PF06733 DEAD_2 XPG1_2283 PF13307 Helicase C-terminal domain XPG1_2283 PF00270 DEAD/DEAH box helicase XPG1_2285 PF00581 Rhodanese-like domain XPG1_2286 PF04226 Transglycosylase associated protein XPG1_2291 PF00425 chorismate binding enzyme XPG1_2291 PF00117 Glutamine amidotransferase class-I XPG1_2292 PF00857 Isochorismatase family XPG1_2292 PF00550 Phosphopantetheine attachment site XPG1_2293 PF00106 short chain dehydrogenase XPG1_2296 PF00005 ABC transporter XPG1_2297 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XPG1_2298 PF05114 Protein of unknown function (DUF692) XPG1_2301 PF13193 AMP-binding enzyme C-terminal domain XPG1_2301 PF00501 AMP-binding enzyme XPG1_2305 PF01207 Dihydrouridine synthase (Dus) XPG1_2306 PF00271 Helicase conserved C-terminal domain XPG1_2306 PF00270 DEAD/DEAH box helicase XPG1_2307 PF00440 Bacterial regulatory proteins, tetR family XPG1_2307 PF09209 Tetracyclin repressor-like, C-terminal domain XPG1_2308 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XPG1_2309 PF00005 ABC transporter XPG1_2312 PF03797 Autotransporter beta-domain XPG1_2312 PF00657 GDSL-like Lipase/Acylhydrolase XPG1_2313 PF01027 Inhibitor of apoptosis-promoting Bax1 XPG1_2314 PF02391 MoaE protein XPG1_2315 PF02597 ThiS family XPG1_2316 PF01967 MoaC family XPG1_2317 PF04055 Radical SAM superfamily XPG1_2317 PF06463 Molybdenum Cofactor Synthesis C XPG1_2318 PF01933 Uncharacterised protein family UPF0052 XPG1_2319 PF00271 Helicase conserved C-terminal domain XPG1_2319 PF12344 Ultra-violet resistance protein B XPG1_2319 PF02151 UvrB/uvrC motif XPG1_2319 PF04851 Type III restriction enzyme, res subunit XPG1_2319 PF17757 UvrB interaction domain XPG1_2322 PF08241 Methyltransferase domain XPG1_2323 PF00155 Aminotransferase class I and II XPG1_2324 PF04055 Radical SAM superfamily XPG1_2324 PF06968 Biotin and Thiamin Synthesis associated domain XPG1_2325 PF00202 Aminotransferase class-III XPG1_2327 PF10282 Lactonase, 7-bladed beta-propeller XPG1_2329 PF00005 ABC transporter XPG1_2329 PF03459 TOBE domain XPG1_2330 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_2332 PF10766 Multidrug efflux pump-associated protein AcrZ XPG1_2333 PF03459 TOBE domain XPG1_2333 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_2334 PF00005 ABC transporter XPG1_2336 PF01810 LysE type translocator XPG1_2337 PF00300 Histidine phosphatase superfamily (branch 1) XPG1_2338 PF13333 Integrase core domain XPG1_2338 PF00665 Integrase core domain XPG1_2338 PF13276 HTH-like domain XPG1_2340 PF00793 DAHP synthetase I family XPG1_2341 PF04973 Nicotinamide mononucleotide transporter XPG1_2343 PF07690 Major Facilitator Superfamily XPG1_2344 PF03466 LysR substrate binding domain XPG1_2344 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_2346 PF13174 Tetratricopeptide repeat XPG1_2346 PF16331 TolA binding protein trimerisation XPG1_2347 PF00691 OmpA family XPG1_2348 PF07676 WD40-like Beta Propeller Repeat XPG1_2348 PF04052 TolB amino-terminal domain XPG1_2349 PF06519 TolA C-terminal XPG1_2350 PF02472 Biopolymer transport protein ExbD/TolR XPG1_2351 PF01618 MotA/TolQ/ExbB proton channel family XPG1_2352 PF03061 Thioesterase superfamily XPG1_2353 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) XPG1_2354 PF02322 Cytochrome bd terminal oxidase subunit II XPG1_2355 PF01654 Cytochrome bd terminal oxidase subunit I XPG1_2356 PF02629 CoA binding domain XPG1_2356 PF00549 CoA-ligase XPG1_2357 PF00549 CoA-ligase XPG1_2357 PF08442 ATP-grasp domain XPG1_2358 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XPG1_2358 PF00364 Biotin-requiring enzyme XPG1_2358 PF02817 e3 binding domain XPG1_2359 PF00676 Dehydrogenase E1 component XPG1_2359 PF16870 2-oxoglutarate dehydrogenase C-terminal XPG1_2359 PF02779 Transketolase, pyrimidine binding domain XPG1_2359 PF16078 2-oxoglutarate dehydrogenase N-terminus XPG1_2360 PF13085 2Fe-2S iron-sulfur cluster binding domain XPG1_2361 PF02910 Fumarate reductase flavoprotein C-term XPG1_2361 PF00890 FAD binding domain XPG1_2362 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XPG1_2363 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XPG1_2365 PF00285 Citrate synthase, C-terminal domain XPG1_2367 PF07690 Major Facilitator Superfamily XPG1_2369 PF01784 NIF3 (NGG1p interacting factor 3) XPG1_2370 PF10725 Protein of unknown function (DUF2517) XPG1_2371 PF03814 Potassium-transporting ATPase A subunit XPG1_2373 PF02669 K+-transporting ATPase, c chain XPG1_2374 PF13492 GAF domain XPG1_2374 PF00512 His Kinase A (phospho-acceptor) domain XPG1_2374 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XPG1_2374 PF02702 Osmosensitive K+ channel His kinase sensor domain XPG1_2374 PF13493 Domain of unknown function (DUF4118) XPG1_2375 PF03714 Bacterial pullanase-associated domain XPG1_2375 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XPG1_2375 PF17967 Pullulanase N2 domain XPG1_2375 PF18494 Pullulanase Ins domain XPG1_2375 PF11852 Domain of unknown function (DUF3372) XPG1_2378 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XPG1_2378 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XPG1_2378 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XPG1_2378 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XPG1_2379 PF03925 SeqA protein C-terminal domain XPG1_2379 PF17206 SeqA protein N-terminal domain XPG1_2380 PF12697 Alpha/beta hydrolase family XPG1_2381 PF13649 Methyltransferase domain XPG1_2384 PF00459 Inositol monophosphatase family XPG1_2385 PF16671 Actin cross-linking domain XPG1_2385 PF12146 Serine aminopeptidase, S33 XPG1_2385 PF11647 Membrane Localization Domain XPG1_2385 PF11713 Peptidase C80 family XPG1_2385 PF07634 RtxA repeat XPG1_2386 PF02794 RTX toxin acyltransferase family XPG1_2389 PF00664 ABC transporter transmembrane region XPG1_2389 PF00005 ABC transporter XPG1_2389 PF03412 Peptidase C39 family XPG1_2391 PF03412 Peptidase C39 family XPG1_2391 PF00005 ABC transporter XPG1_2391 PF00664 ABC transporter transmembrane region XPG1_2392 PF02311 AraC-like ligand binding domain XPG1_2392 PF12833 Helix-turn-helix domain XPG1_2393 PF01402 Ribbon-helix-helix protein, copG family XPG1_2394 PF00258 Flavodoxin XPG1_2395 PF01475 Ferric uptake regulator family XPG1_2396 PF00749 tRNA synthetases class I (E and Q), catalytic domain XPG1_2396 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain XPG1_2397 PF00291 Pyridoxal-phosphate dependent enzyme XPG1_2399 PF12833 Helix-turn-helix domain XPG1_2399 PF02311 AraC-like ligand binding domain XPG1_2405 PF00367 phosphotransferase system, EIIB XPG1_2405 PF02378 Phosphotransferase system, EIIC XPG1_2405 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 XPG1_2407 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase XPG1_2408 PF01979 Amidohydrolase family XPG1_2409 PF00480 ROK family XPG1_2409 PF01047 MarR family XPG1_2411 PF01494 FAD binding domain XPG1_2412 PF04055 Radical SAM superfamily XPG1_2412 PF00919 Uncharacterized protein family UPF0004 XPG1_2412 PF01938 TRAM domain XPG1_2413 PF02562 PhoH-like protein XPG1_2414 PF02130 Uncharacterized protein family UPF0054 XPG1_2415 PF00571 CBS domain XPG1_2415 PF03471 Transporter associated domain XPG1_2416 PF00795 Carbon-nitrogen hydrolase XPG1_2417 PF00497 Bacterial extracellular solute-binding proteins, family 3 XPG1_2418 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_2419 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_2420 PF00005 ABC transporter XPG1_2421 PF00133 tRNA synthetases class I (I, L, M and V) XPG1_2421 PF08264 Anticodon-binding domain of tRNA XPG1_2421 PF13603 Leucyl-tRNA synthetase, Domain 2 XPG1_2422 PF04390 Lipopolysaccharide-assembly XPG1_2423 PF14840 Processivity clamp loader gamma complex DNA pol III C-term XPG1_2423 PF06144 DNA polymerase III, delta subunit XPG1_2424 PF01467 Cytidylyltransferase-like XPG1_2426 PF02590 Predicted SPOUT methyltransferase XPG1_2427 PF03717 Penicillin-binding Protein dimerisation domain XPG1_2427 PF00905 Penicillin binding protein transpeptidase domain XPG1_2428 PF01098 Cell cycle protein XPG1_2429 PF03330 Lytic transglycolase XPG1_2429 PF05036 Sporulation related domain XPG1_2430 PF00768 D-alanyl-D-alanine carboxypeptidase XPG1_2430 PF07943 Penicillin-binding protein 5, C-terminal domain XPG1_2431 PF04359 Protein of unknown function (DUF493) XPG1_2432 PF02386 Cation transport protein XPG1_2435 PF04055 Radical SAM superfamily XPG1_2435 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family XPG1_2436 PF02537 CrcB-like protein, Camphor Resistance (CrcB) XPG1_2437 PF00313 'Cold-shock' DNA-binding domain XPG1_2438 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XPG1_2438 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XPG1_2440 PF00571 CBS domain XPG1_2440 PF00005 ABC transporter XPG1_2441 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_2442 PF04069 Substrate binding domain of ABC-type glycine betaine transport system XPG1_2444 PF03591 AzlC protein XPG1_2445 PF01047 MarR family XPG1_2446 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XPG1_2446 PF00529 HlyD membrane-fusion protein of T1SS XPG1_2447 PF07690 Major Facilitator Superfamily XPG1_2448 PF06276 Ferric iron reductase FhuF-like transporter XPG1_2448 PF11575 FhuF 2Fe-2S C-terminal domain XPG1_2449 PF00005 ABC transporter XPG1_2452 PF08032 RNA 2'-O ribose methyltransferase substrate binding XPG1_2452 PF00588 SpoU rRNA Methylase family XPG1_2455 PF13607 Succinyl-CoA ligase like flavodoxin domain XPG1_2455 PF13380 CoA binding domain XPG1_2455 PF00583 Acetyltransferase (GNAT) family XPG1_2456 PF13091 PLD-like domain XPG1_2462 PF10431 C-terminal, D2-small domain, of ClpB protein XPG1_2462 PF02861 Clp amino terminal domain, pathogenicity island component XPG1_2462 PF17871 AAA lid domain XPG1_2462 PF07724 AAA domain (Cdc48 subfamily) XPG1_2462 PF00004 ATPase family associated with various cellular activities (AAA) XPG1_2464 PF00849 RNA pseudouridylate synthase XPG1_2464 PF01479 S4 domain XPG1_2465 PF13525 Outer membrane lipoprotein XPG1_2468 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_2468 PF03466 LysR substrate binding domain XPG1_2474 PF02153 Prephenate dehydrogenase XPG1_2474 PF01817 Chorismate mutase type II XPG1_2475 PF00793 DAHP synthetase I family XPG1_2476 PF03605 Anaerobic c4-dicarboxylate membrane transporter XPG1_2477 PF01245 Ribosomal protein L19 XPG1_2478 PF01746 tRNA (Guanine-1)-methyltransferase XPG1_2479 PF05239 PRC-barrel domain XPG1_2479 PF01782 RimM N-terminal domain XPG1_2480 PF00886 Ribosomal protein S16 XPG1_2481 PF00448 SRP54-type protein, GTPase domain XPG1_2481 PF02978 Signal peptide binding domain XPG1_2481 PF02881 SRP54-type protein, helical bundle domain XPG1_2482 PF01578 Cytochrome C assembly protein XPG1_2483 PF00571 CBS domain XPG1_2483 PF03471 Transporter associated domain XPG1_2483 PF01595 Cyclin M transmembrane N-terminal domain XPG1_2484 PF04262 Glutamate-cysteine ligase XPG1_2486 PF02599 Global regulator protein family XPG1_2487 PF01411 tRNA synthetases class II (A) XPG1_2487 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XPG1_2487 PF02272 DHHA1 domain XPG1_2488 PF00154 recA bacterial DNA recombination protein XPG1_2489 PF02464 Competence-damaged protein XPG1_2490 PF07690 Major Facilitator Superfamily XPG1_2491 PF00501 AMP-binding enzyme XPG1_2491 PF01553 Acyltransferase XPG1_2491 PF13193 AMP-binding enzyme C-terminal domain XPG1_2492 PF01202 Shikimate kinase XPG1_2493 PF00171 Aldehyde dehydrogenase family XPG1_2494 PF01472 PUA domain XPG1_2494 PF00696 Amino acid kinase family XPG1_2495 PF07417 Sigma factor-binding transcriptional regulator Crl XPG1_2497 PF00156 Phosphoribosyl transferase domain XPG1_2500 PF01546 Peptidase family M20/M25/M40 XPG1_2500 PF07687 Peptidase dimerisation domain XPG1_2501 PF07690 Major Facilitator Superfamily XPG1_2502 PF03466 LysR substrate binding domain XPG1_2502 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_2509 PF07715 TonB-dependent Receptor Plug Domain XPG1_2509 PF00593 TonB dependent receptor XPG1_2510 PF08281 Sigma-70, region 4 XPG1_2510 PF04542 Sigma-70 region 2 XPG1_2511 PF04400 (Na+)-NQR maturation NqrM XPG1_2512 PF02424 ApbE family XPG1_2513 PF00175 Oxidoreductase NAD-binding domain XPG1_2513 PF00970 Oxidoreductase FAD-binding domain XPG1_2513 PF00111 2Fe-2S iron-sulfur cluster binding domain XPG1_2514 PF02508 Rnf-Nqr subunit, membrane protein XPG1_2515 PF02508 Rnf-Nqr subunit, membrane protein XPG1_2516 PF04205 FMN-binding domain XPG1_2517 PF03116 NQR2, RnfD, RnfE family XPG1_2518 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) XPG1_2518 PF11973 NQRA C-terminal domain XPG1_2519 PF03734 L,D-transpeptidase catalytic domain XPG1_2520 PF13230 Glutamine amidotransferases class-II XPG1_2521 PF13580 SIS domain XPG1_2522 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XPG1_2522 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XPG1_2522 PF09317 Domain of unknown function (DUF1974) XPG1_2523 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain XPG1_2523 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XPG1_2524 PF03466 LysR substrate binding domain XPG1_2524 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_2525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_2525 PF03466 LysR substrate binding domain XPG1_2528 PF06750 Bacterial Peptidase A24 N-terminal domain XPG1_2528 PF01478 Type IV leader peptidase family XPG1_2530 PF04452 RNA methyltransferase XPG1_2531 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain XPG1_2531 PF02951 Prokaryotic glutathione synthetase, N-terminal domain XPG1_2532 PF02622 Uncharacterized ACR, COG1678 XPG1_2533 PF03652 Holliday junction resolvase XPG1_2534 PF00437 Type II/IV secretion system protein XPG1_2535 PF01168 Alanine racemase, N-terminal domain XPG1_2536 PF03807 NADP oxidoreductase coenzyme F420-dependent XPG1_2536 PF14748 Pyrroline-5-carboxylate reductase dimerisation XPG1_2537 PF02325 YGGT family XPG1_2538 PF01725 Ham1 family XPG1_2539 PF04055 Radical SAM superfamily XPG1_2539 PF06969 HemN C-terminal domain XPG1_2540 PF00694 Aconitase C-terminal domain XPG1_2541 PF00330 Aconitase family (aconitate hydratase) XPG1_2542 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_2542 PF03466 LysR substrate binding domain XPG1_2544 PF01161 Phosphatidylethanolamine-binding protein XPG1_2545 PF01497 Periplasmic binding protein XPG1_2546 PF11101 Protein of unknown function (DUF2884) XPG1_2547 PF04960 Glutaminase XPG1_2548 PF04320 Protein with unknown function (DUF469) XPG1_2549 PF02390 Putative methyltransferase XPG1_2550 PF00730 HhH-GPD superfamily base excision DNA repair protein XPG1_2550 PF10576 Iron-sulfur binding domain of endonuclease III XPG1_2550 PF14815 NUDIX domain XPG1_2550 PF00633 Helix-hairpin-helix motif XPG1_2551 PF04362 Bacterial Fe(2+) trafficking XPG1_2552 PF01464 Transglycosylase SLT domain XPG1_2552 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain XPG1_2553 PF00589 Phage integrase family XPG1_2557 PF06755 CbtA_toxin of type IV toxin-antitoxin system XPG1_2562 PF04299 Putative FMN-binding domain XPG1_2569 PF00202 Aminotransferase class-III XPG1_2578 PF12759 InsA C-terminal domain XPG1_2578 PF03811 InsA N-terminal domain XPG1_2579 PF03400 IS1 transposase XPG1_2582 PF06969 HemN C-terminal domain XPG1_2582 PF04055 Radical SAM superfamily XPG1_2586 PF04199 Putative cyclase XPG1_2590 PF01878 EVE domain XPG1_2591 PF07690 Major Facilitator Superfamily XPG1_2593 PF09134 Invasin, domain 3 XPG1_2593 PF07979 Intimin C-type lectin domain XPG1_2593 PF11924 Inverse autotransporter, beta-domain XPG1_2593 PF02369 Bacterial Ig-like domain (group 1) XPG1_2613 PF13693 Winged helix-turn-helix DNA-binding XPG1_2617 PF00436 Single-strand binding protein family XPG1_2620 PF13005 zinc-finger binding domain of transposase IS66 XPG1_2620 PF13007 Transposase C of IS166 homeodomain XPG1_2620 PF13817 IS66 C-terminal element XPG1_2620 PF03050 Transposase IS66 family XPG1_2624 PF01609 Transposase DDE domain XPG1_2624 PF13006 Insertion element 4 transposase N-terminal XPG1_2628 PF11924 Inverse autotransporter, beta-domain XPG1_2628 PF07979 Intimin C-type lectin domain XPG1_2628 PF02369 Bacterial Ig-like domain (group 1) XPG1_2628 PF09134 Invasin, domain 3 XPG1_2629 PF00589 Phage integrase family XPG1_2629 PF13495 Phage integrase, N-terminal SAM-like domain XPG1_2637 PF00067 Cytochrome P450 XPG1_2639 PF02195 ParB-like nuclease domain XPG1_2642 PF01609 Transposase DDE domain XPG1_2642 PF02281 Transposase Tn5 dimerisation domain XPG1_2642 PF14706 Transposase DNA-binding XPG1_2645 PF00772 DnaB-like helicase N terminal domain XPG1_2645 PF03796 DnaB-like helicase C terminal domain XPG1_2649 PF00550 Phosphopantetheine attachment site XPG1_2649 PF00668 Condensation domain XPG1_2649 PF13193 AMP-binding enzyme C-terminal domain XPG1_2649 PF00501 AMP-binding enzyme XPG1_2650 PF08241 Methyltransferase domain XPG1_2654 PF00501 AMP-binding enzyme XPG1_2654 PF13193 AMP-binding enzyme C-terminal domain XPG1_2654 PF00668 Condensation domain XPG1_2654 PF00550 Phosphopantetheine attachment site XPG1_2657 PF00501 AMP-binding enzyme XPG1_2657 PF13193 AMP-binding enzyme C-terminal domain XPG1_2657 PF00550 Phosphopantetheine attachment site XPG1_2660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_2660 PF03466 LysR substrate binding domain XPG1_2661 PF00248 Aldo/keto reductase family XPG1_2662 PF07690 Major Facilitator Superfamily XPG1_2666 PF01638 HxlR-like helix-turn-helix XPG1_2667 PF00107 Zinc-binding dehydrogenase XPG1_2667 PF08240 Alcohol dehydrogenase GroES-like domain XPG1_2675 PF13683 Integrase core domain XPG1_2676 PF01527 Transposase XPG1_2685 PF00106 short chain dehydrogenase XPG1_2686 PF14226 non-haem dioxygenase in morphine synthesis N-terminal XPG1_2686 PF03171 2OG-Fe(II) oxygenase superfamily XPG1_2687 PF13276 HTH-like domain XPG1_2687 PF00665 Integrase core domain XPG1_2687 PF13333 Integrase core domain XPG1_2691 PF03466 LysR substrate binding domain XPG1_2691 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_2698 PF00925 GTP cyclohydrolase II XPG1_2699 PF00069 Protein kinase domain XPG1_2699 PF03781 Sulfatase-modifying factor enzyme 1 XPG1_2702 PF12759 InsA C-terminal domain XPG1_2702 PF03811 InsA N-terminal domain XPG1_2703 PF07690 Major Facilitator Superfamily XPG1_2704 PF00440 Bacterial regulatory proteins, tetR family XPG1_2708 PF01022 Bacterial regulatory protein, arsR family XPG1_2709 PF07690 Major Facilitator Superfamily XPG1_2712 PF00550 Phosphopantetheine attachment site XPG1_2712 PF00668 Condensation domain XPG1_2712 PF13193 AMP-binding enzyme C-terminal domain XPG1_2712 PF00501 AMP-binding enzyme XPG1_2713 PF05199 GMC oxidoreductase XPG1_2713 PF00732 GMC oxidoreductase XPG1_2714 PF00975 Thioesterase domain XPG1_2715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XPG1_2715 PF02770 Acyl-CoA dehydrogenase, middle domain XPG1_2715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XPG1_2720 PF07690 Major Facilitator Superfamily XPG1_2723 PF01757 Acyltransferase family XPG1_2724 PF00106 short chain dehydrogenase XPG1_2728 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XPG1_2729 PF00730 HhH-GPD superfamily base excision DNA repair protein XPG1_2729 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain XPG1_2730 PF01817 Chorismate mutase type II XPG1_2730 PF00800 Prephenate dehydratase XPG1_2734 PF00171 Aldehyde dehydrogenase family XPG1_2736 PF00258 Flavodoxin XPG1_2737 PF00849 RNA pseudouridylate synthase XPG1_2738 PF04287 tRNA pseudouridine synthase C XPG1_2739 PF07348 Syd protein (SUKH-2) XPG1_2740 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term XPG1_2740 PF14489 QueF-like protein XPG1_2741 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases XPG1_2741 PF03641 Possible lysine decarboxylase XPG1_2741 PF11892 Domain of unknown function (DUF3412) XPG1_2742 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XPG1_2742 PF01367 5'-3' exonuclease, C-terminal SAM fold XPG1_2743 PF02321 Outer membrane efflux protein XPG1_2744 PF00529 HlyD membrane-fusion protein of T1SS XPG1_2745 PF00664 ABC transporter transmembrane region XPG1_2745 PF00005 ABC transporter XPG1_2746 PF02974 Protease inhibitor Inh XPG1_2747 PF08548 Peptidase M10 serralysin C terminal XPG1_2747 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) XPG1_2748 PF04328 Selenoprotein, putative XPG1_2749 PF13722 5TM C-terminal transporter carbon starvation CstA XPG1_2749 PF02554 Carbon starvation protein CstA XPG1_2750 PF00884 Sulfatase XPG1_2759 PF04717 Type VI secretion system, phage-baseplate injector XPG1_2760 PF01624 MutS domain I XPG1_2760 PF05188 MutS domain II XPG1_2760 PF00488 MutS domain V XPG1_2760 PF05192 MutS domain III XPG1_2760 PF05190 MutS family domain IV XPG1_2761 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) XPG1_2762 PF04545 Sigma-70, region 4 XPG1_2762 PF04539 Sigma-70 region 3 XPG1_2762 PF04542 Sigma-70 region 2 XPG1_2762 PF00140 Sigma-70 factor, region 1.2 XPG1_2763 PF01476 LysM domain XPG1_2763 PF01551 Peptidase family M23 XPG1_2766 PF01975 Survival protein SurE XPG1_2767 PF01142 tRNA pseudouridine synthase D (TruD) XPG1_2768 PF02542 YgbB family XPG1_2769 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase XPG1_2770 PF04977 Septum formation initiator XPG1_2778 PF00009 Elongation factor Tu GTP binding domain XPG1_2779 PF01507 Phosphoadenosine phosphosulfate reductase family XPG1_2780 PF10414 Sirohaem synthase dimerisation region XPG1_2780 PF14824 Sirohaem biosynthesis protein central XPG1_2780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XPG1_2781 PF01507 Phosphoadenosine phosphosulfate reductase family XPG1_2782 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XPG1_2782 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XPG1_2783 PF00667 FAD binding domain XPG1_2783 PF00258 Flavodoxin XPG1_2783 PF00175 Oxidoreductase NAD-binding domain XPG1_2784 PF01242 6-pyruvoyl tetrahydropterin synthase XPG1_2785 PF04055 Radical SAM superfamily XPG1_2786 PF00324 Amino acid permease XPG1_2787 PF03372 Endonuclease/Exonuclease/phosphatase family XPG1_2795 PF09383 NIL domain XPG1_2795 PF00005 ABC transporter XPG1_2796 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_2797 PF03180 NLPA lipoprotein XPG1_2800 PF18389 TrmO C-terminal domain XPG1_2800 PF01980 tRNA-methyltransferase O XPG1_2801 PF03129 Anticodon binding domain XPG1_2801 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XPG1_2801 PF04073 Aminoacyl-tRNA editing domain XPG1_2802 PF07073 Modulator of Rho-dependent transcription termination (ROF) XPG1_2803 PF00005 ABC transporter XPG1_2803 PF12848 ABC transporter XPG1_2805 PF00109 Beta-ketoacyl synthase, N-terminal domain XPG1_2805 PF02801 Beta-ketoacyl synthase, C-terminal domain XPG1_2807 PF01464 Transglycosylase SLT domain XPG1_2807 PF14718 Soluble lytic murein transglycosylase L domain XPG1_2809 PF01371 Trp repressor protein XPG1_2810 PF01931 Protein of unknown function DUF84 XPG1_2811 PF00300 Histidine phosphatase superfamily (branch 1) XPG1_2812 PF12833 Helix-turn-helix domain XPG1_2812 PF06445 GyrI-like small molecule binding domain XPG1_2813 PF05981 CreA protein XPG1_2814 PF00486 Transcriptional regulatory protein, C terminal XPG1_2814 PF00072 Response regulator receiver domain XPG1_2815 PF13840 ACT domain XPG1_2815 PF01842 ACT domain XPG1_2815 PF00696 Amino acid kinase family XPG1_2815 PF03447 Homoserine dehydrogenase, NAD binding domain XPG1_2815 PF00742 Homoserine dehydrogenase XPG1_2816 PF00288 GHMP kinases N terminal domain XPG1_2816 PF08544 GHMP kinases C terminal XPG1_2817 PF14821 Threonine synthase N terminus XPG1_2817 PF00291 Pyridoxal-phosphate dependent enzyme XPG1_2818 PF03883 Peroxide stress protein YaaA XPG1_2819 PF00923 Transaldolase/Fructose-6-phosphate aldolase XPG1_2820 PF00994 Probable molybdopterin binding domain XPG1_2821 PF07690 Major Facilitator Superfamily XPG1_2822 PF01184 GPR1/FUN34/yaaH family XPG1_2823 PF00012 Hsp70 protein XPG1_2824 PF01556 DnaJ C terminal domain XPG1_2824 PF00684 DnaJ central domain XPG1_2824 PF00226 DnaJ domain XPG1_2828 PF07690 Major Facilitator Superfamily XPG1_2829 PF06965 Na+/H+ antiporter 1 XPG1_2830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_2830 PF03466 LysR substrate binding domain XPG1_2831 PF01649 Ribosomal protein S20 XPG1_2832 PF06574 FAD synthetase XPG1_2832 PF01687 Riboflavin kinase XPG1_2833 PF00133 tRNA synthetases class I (I, L, M and V) XPG1_2833 PF06827 Zinc finger found in FPG and IleRS XPG1_2833 PF08264 Anticodon-binding domain of tRNA XPG1_2834 PF01252 Signal peptidase (SPase) II XPG1_2835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XPG1_2836 PF02401 LytB protein XPG1_2837 PF05173 Dihydrodipicolinate reductase, C-terminus XPG1_2837 PF01113 Dihydrodipicolinate reductase, N-terminus XPG1_2838 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain XPG1_2838 PF00117 Glutamine amidotransferase class-I XPG1_2839 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XPG1_2839 PF02142 MGS-like domain XPG1_2839 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XPG1_2840 PF01381 Helix-turn-helix XPG1_2843 PF00419 Fimbrial protein XPG1_2844 PF02753 Pili assembly chaperone PapD, C-terminal domain XPG1_2844 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain XPG1_2845 PF13953 PapC C-terminal domain XPG1_2845 PF00577 Outer membrane usher protein XPG1_2845 PF13954 PapC N-terminal domain XPG1_2846 PF00419 Fimbrial protein XPG1_2847 PF01048 Phosphorylase superfamily XPG1_2848 PF01676 Metalloenzyme superfamily XPG1_2849 PF00591 Glycosyl transferase family, a/b domain XPG1_2849 PF02885 Glycosyl transferase family, helical bundle domain XPG1_2849 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain XPG1_2850 PF01791 DeoC/LacD family aldolase XPG1_2851 PF01773 Na+ dependent nucleoside transporter N-terminus XPG1_2851 PF07670 Nucleoside recognition XPG1_2851 PF07662 Na+ dependent nucleoside transporter C-terminus XPG1_2852 PF01026 TatD related DNase XPG1_2853 PF01734 Patatin-like phospholipase XPG1_2854 PF00009 Elongation factor Tu GTP binding domain XPG1_2854 PF03144 Elongation factor Tu domain 2 XPG1_2854 PF16658 Class II release factor RF3, C-terminal domain XPG1_2855 PF00583 Acetyltransferase (GNAT) family XPG1_2856 PF03603 DNA polymerase III psi subunit XPG1_2858 PF05175 Methyltransferase small domain XPG1_2858 PF08468 Methyltransferase small domain N-terminal XPG1_2859 PF00245 Alkaline phosphatase XPG1_2860 PF01156 Inosine-uridine preferring nucleoside hydrolase XPG1_2862 PF01381 Helix-turn-helix XPG1_2863 PF13693 Winged helix-turn-helix DNA-binding XPG1_2864 PF00893 Small Multidrug Resistance protein XPG1_2865 PF01132 Elongation factor P (EF-P) OB domain XPG1_2865 PF09285 Elongation factor P, C-terminal XPG1_2865 PF08207 Elongation factor P (EF-P) KOW-like domain XPG1_2866 PF04055 Radical SAM superfamily XPG1_2867 PF13698 Domain of unknown function (DUF4156) XPG1_2868 PF00118 TCP-1/cpn60 chaperonin family XPG1_2869 PF00166 Chaperonin 10 Kd subunit XPG1_2870 PF04186 FxsA cytoplasmic membrane protein XPG1_2871 PF10415 Fumarase C C-terminus XPG1_2871 PF00206 Lyase XPG1_2877 PF03605 Anaerobic c4-dicarboxylate membrane transporter XPG1_2879 PF13098 Thioredoxin-like domain XPG1_2879 PF02683 Cytochrome C biogenesis protein transmembrane region XPG1_2879 PF11412 Disulphide bond corrector protein DsbC XPG1_2881 PF00589 Phage integrase family XPG1_2885 PF06755 CbtA_toxin of type IV toxin-antitoxin system XPG1_2891 PF01548 Transposase XPG1_2891 PF02371 Transposase IS116/IS110/IS902 family XPG1_2894 PF13533 Biotin-lipoyl like XPG1_2896 PF07690 Major Facilitator Superfamily XPG1_2897 PF03400 IS1 transposase XPG1_2898 PF12759 InsA C-terminal domain XPG1_2898 PF03811 InsA N-terminal domain XPG1_2909 PF03050 Transposase IS66 family XPG1_2909 PF13817 IS66 C-terminal element XPG1_2909 PF13005 zinc-finger binding domain of transposase IS66 XPG1_2909 PF13007 Transposase C of IS166 homeodomain XPG1_2920 PF13693 Winged helix-turn-helix DNA-binding XPG1_2924 PF00436 Single-strand binding protein family XPG1_2937 PF00772 DnaB-like helicase N terminal domain XPG1_2937 PF03796 DnaB-like helicase C terminal domain XPG1_2943 PF07690 Major Facilitator Superfamily XPG1_2946 PF17926 Tetracyclin repressor-like, C-terminal domain XPG1_2946 PF00440 Bacterial regulatory proteins, tetR family XPG1_2947 PF07690 Major Facilitator Superfamily XPG1_2948 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_2948 PF03466 LysR substrate binding domain XPG1_2949 PF09179 TilS substrate binding domain XPG1_2949 PF01171 PP-loop family XPG1_2949 PF11734 TilS substrate C-terminal domain XPG1_2950 PF00892 EamA-like transporter family XPG1_2952 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit XPG1_2953 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XPG1_2953 PF07733 Bacterial DNA polymerase III alpha NTPase domain XPG1_2953 PF14579 Helix-hairpin-helix motif XPG1_2953 PF02811 PHP domain XPG1_2953 PF01336 OB-fold nucleic acid binding domain XPG1_2954 PF01351 Ribonuclease HII XPG1_2955 PF02684 Lipid-A-disaccharide synthetase XPG1_2956 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 XPG1_2956 PF00132 Bacterial transferase hexapeptide (six repeats) XPG1_2957 PF07977 FabA-like domain XPG1_2958 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD XPG1_2958 PF00132 Bacterial transferase hexapeptide (six repeats) XPG1_2959 PF03938 Outer membrane protein (OmpH-like) XPG1_2961 PF07244 Surface antigen variable number repeat XPG1_2961 PF01103 Surface antigen XPG1_2962 PF17820 PDZ domain XPG1_2962 PF02163 Peptidase family M50 XPG1_2964 PF01255 Putative undecaprenyl diphosphate synthase XPG1_2965 PF13288 DXP reductoisomerase C-terminal domain XPG1_2965 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase XPG1_2965 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain XPG1_2966 PF01765 Ribosome recycling factor XPG1_2967 PF00696 Amino acid kinase family XPG1_2968 PF00889 Elongation factor TS XPG1_2969 PF00318 Ribosomal protein S2 XPG1_2970 PF00557 Metallopeptidase family M24 XPG1_2971 PF01842 ACT domain XPG1_2971 PF08335 GlnD PII-uridylyltransferase XPG1_2971 PF01966 HD domain XPG1_2972 PF14602 Hexapeptide repeat of succinyl-transferase XPG1_2972 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal XPG1_2972 PF00132 Bacterial transferase hexapeptide (six repeats) XPG1_2973 PF00005 ABC transporter XPG1_2974 PF13521 AAA domain XPG1_2974 PF01381 Helix-turn-helix XPG1_2975 PF18073 Rubredoxin metal binding domain XPG1_2976 PF18429 Domain of unknown function (DUF5609) XPG1_2977 PF10144 Bacterial virulence factor haemolysin XPG1_2978 PF00248 Aldo/keto reductase family XPG1_2979 PF09335 SNARE associated Golgi protein XPG1_2982 PF01053 Cys/Met metabolism PLP-dependent enzyme XPG1_2983 PF01618 MotA/TolQ/ExbB proton channel family XPG1_2984 PF02472 Biopolymer transport protein ExbD/TolR XPG1_2987 PF00267 Gram-negative porin XPG1_2988 PF04381 Putative exonuclease, RdgC XPG1_2989 PF00480 ROK family XPG1_2990 PF00149 Calcineurin-like phosphoesterase XPG1_2990 PF02872 5'-nucleotidase, C-terminal domain XPG1_2991 PF00186 Dihydrofolate reductase XPG1_2993 PF07731 Multicopper oxidase XPG1_2993 PF07732 Multicopper oxidase XPG1_2994 PF01553 Acyltransferase XPG1_2995 PF00521 DNA gyrase/topoisomerase IV, subunit A XPG1_2995 PF03989 DNA gyrase C-terminal domain, beta-propeller XPG1_2996 PF01751 Toprim domain XPG1_2996 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XPG1_2996 PF00204 DNA gyrase B XPG1_2996 PF00986 DNA gyrase B subunit, carboxyl terminus XPG1_2997 PF05728 Uncharacterised protein family (UPF0227) XPG1_2998 PF00149 Calcineurin-like phosphoesterase XPG1_2999 PF00293 NUDIX domain XPG1_3000 PF02321 Outer membrane efflux protein XPG1_3001 PF06693 Protein of unknown function (DUF1190) XPG1_3002 PF03738 Glutathionylspermidine synthase preATP-grasp XPG1_3003 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XPG1_3004 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase XPG1_3006 PF04380 Membrane fusogenic activity XPG1_3007 PF00294 pfkB family carbohydrate kinase XPG1_3007 PF01467 Cytidylyltransferase-like XPG1_3008 PF08335 GlnD PII-uridylyltransferase XPG1_3008 PF03710 Glutamate-ammonia ligase adenylyltransferase XPG1_3009 PF01928 CYTH domain XPG1_3010 PF08239 Bacterial SH3 domain XPG1_3011 PF12627 Probable RNA and SrmB- binding site of polymerase A XPG1_3011 PF01743 Poly A polymerase head domain XPG1_3011 PF01966 HD domain XPG1_3012 PF02152 Dihydroneopterin aldolase XPG1_3013 PF02660 Glycerol-3-phosphate acyltransferase XPG1_3014 PF08240 Alcohol dehydrogenase GroES-like domain XPG1_3014 PF00107 Zinc-binding dehydrogenase XPG1_3014 PF13823 Alcohol dehydrogenase GroES-associated XPG1_3015 PF00814 Glycoprotease family XPG1_3016 PF01165 Ribosomal protein S21 XPG1_3017 PF01807 CHC2 zinc finger XPG1_3017 PF08275 DNA primase catalytic core, N-terminal domain XPG1_3017 PF10410 DnaB-helicase binding domain of primase XPG1_3017 PF08278 DNA primase DnaG DnaB-binding XPG1_3018 PF04545 Sigma-70, region 4 XPG1_3018 PF04539 Sigma-70 region 3 XPG1_3018 PF04542 Sigma-70 region 2 XPG1_3018 PF00140 Sigma-70 factor, region 1.2 XPG1_3018 PF03979 Sigma-70 factor, region 1.1 XPG1_3018 PF04546 Sigma-70, non-essential region XPG1_3019 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system XPG1_3020 PF07927 HicA toxin of bacterial toxin-antitoxin, XPG1_3024 PF09190 DALR domain XPG1_3024 PF01406 tRNA synthetases class I (C) catalytic domain XPG1_3026 PF01381 Helix-turn-helix XPG1_3027 PF02595 Glycerate kinase family XPG1_3028 PF04545 Sigma-70, region 4 XPG1_3028 PF04542 Sigma-70 region 2 XPG1_3028 PF00140 Sigma-70 factor, region 1.2 XPG1_3029 PF02687 FtsX-like permease family XPG1_3029 PF18075 FtsX extracellular domain XPG1_3030 PF00005 ABC transporter XPG1_3031 PF02881 SRP54-type protein, helical bundle domain XPG1_3031 PF00448 SRP54-type protein, GTPase domain XPG1_3031 PF00448 SRP54-type protein, GTPase domain XPG1_3031 PF02881 SRP54-type protein, helical bundle domain XPG1_3033 PF06611 Protein of unknown function (DUF1145) XPG1_3034 PF00403 Heavy-metal-associated domain XPG1_3036 PF01206 Sulfurtransferase TusA XPG1_3037 PF02592 Putative vitamin uptake transporter XPG1_3038 PF00465 Iron-containing alcohol dehydrogenase XPG1_3039 PF00668 Condensation domain XPG1_3039 PF13193 AMP-binding enzyme C-terminal domain XPG1_3039 PF00550 Phosphopantetheine attachment site XPG1_3039 PF00501 AMP-binding enzyme XPG1_3039 PF07993 Male sterility protein XPG1_3040 PF07690 Major Facilitator Superfamily XPG1_3041 PF03009 Glycerophosphoryl diester phosphodiesterase family XPG1_3042 PF00152 tRNA synthetases class II (D, K and N) XPG1_3044 PF00890 FAD binding domain XPG1_3044 PF02910 Fumarate reductase flavoprotein C-term XPG1_3045 PF13085 2Fe-2S iron-sulfur cluster binding domain XPG1_3045 PF13183 4Fe-4S dicluster domain XPG1_3046 PF02300 Fumarate reductase subunit C XPG1_3047 PF02313 Fumarate reductase subunit D XPG1_3048 PF00593 TonB dependent receptor XPG1_3048 PF07715 TonB-dependent Receptor Plug Domain XPG1_3049 PF02785 Biotin carboxylase C-terminal domain XPG1_3049 PF00289 Biotin carboxylase, N-terminal domain XPG1_3049 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XPG1_3049 PF00364 Biotin-requiring enzyme XPG1_3051 PF03746 LamB/YcsF family XPG1_3052 PF01566 Natural resistance-associated macrophage protein XPG1_3059 PF12724 Flavodoxin domain XPG1_3060 PF02386 Cation transport protein XPG1_3061 PF09186 Domain of unknown function (DUF1949) XPG1_3061 PF01205 Uncharacterized protein family UPF0029 XPG1_3062 PF00557 Metallopeptidase family M24 XPG1_3063 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XPG1_3063 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XPG1_3063 PF00378 Enoyl-CoA hydratase/isomerase XPG1_3064 PF00108 Thiolase, N-terminal domain XPG1_3064 PF02803 Thiolase, C-terminal domain XPG1_3065 PF00175 Oxidoreductase NAD-binding domain XPG1_3065 PF00970 Oxidoreductase FAD-binding domain XPG1_3066 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase XPG1_3068 PF02357 Transcription termination factor nusG XPG1_3069 PF00490 Delta-aminolevulinic acid dehydratase XPG1_3070 PF00902 Sec-independent protein translocase protein (TatC) XPG1_3072 PF02416 mttA/Hcf106 family XPG1_3073 PF03109 ABC1 family XPG1_3074 PF02036 SCP-2 sterol transfer family XPG1_3075 PF01209 ubiE/COQ5 methyltransferase family XPG1_3076 PF02646 RmuC family XPG1_3077 PF09335 SNARE associated Golgi protein XPG1_3079 PF01048 Phosphorylase superfamily XPG1_3080 PF02447 GntP family permease XPG1_3084 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH XPG1_3091 PF01925 Sulfite exporter TauE/SafE XPG1_3097 PF01717 Cobalamin-independent synthase, Catalytic domain XPG1_3097 PF08267 Cobalamin-independent synthase, N-terminal domain XPG1_3098 PF03466 LysR substrate binding domain XPG1_3098 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_3099 PF00892 EamA-like transporter family XPG1_3100 PF00999 Sodium/hydrogen exchanger family XPG1_3101 PF00860 Permease family XPG1_3102 PF02685 Glucokinase XPG1_3103 PF00005 ABC transporter XPG1_3103 PF00664 ABC transporter transmembrane region XPG1_3105 PF00436 Single-strand binding protein family XPG1_3106 PF17760 UvrA interaction domain XPG1_3106 PF17755 UvrA DNA-binding domain XPG1_3106 PF00005 ABC transporter XPG1_3110 PF00155 Aminotransferase class I and II XPG1_3111 PF01168 Alanine racemase, N-terminal domain XPG1_3111 PF00842 Alanine racemase, C-terminal domain XPG1_3112 PF03796 DnaB-like helicase C terminal domain XPG1_3112 PF00772 DnaB-like helicase N terminal domain XPG1_3113 PF00107 Zinc-binding dehydrogenase XPG1_3113 PF08240 Alcohol dehydrogenase GroES-like domain XPG1_3115 PF01207 Dihydrouridine synthase (Dus) XPG1_3116 PF01475 Ferric uptake regulator family XPG1_3117 PF00717 Peptidase S24-like XPG1_3117 PF01726 LexA DNA binding domain XPG1_3118 PF01219 Prokaryotic diacylglycerol kinase XPG1_3119 PF01553 Acyltransferase XPG1_3120 PF01040 UbiA prenyltransferase family XPG1_3121 PF04345 Chorismate lyase XPG1_3122 PF00342 Phosphoglucose isomerase XPG1_3124 PF00696 Amino acid kinase family XPG1_3124 PF01842 ACT domain XPG1_3126 PF09339 IclR helix-turn-helix domain XPG1_3126 PF01614 Bacterial transcriptional regulator XPG1_3127 PF01081 KDPG and KHG aldolase XPG1_3128 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) XPG1_3129 PF00463 Isocitrate lyase family XPG1_3130 PF01274 Malate synthase XPG1_3131 PF04204 Homoserine O-succinyltransferase XPG1_3138 PF02142 MGS-like domain XPG1_3138 PF01808 AICARFT/IMPCHase bienzyme XPG1_3139 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain XPG1_3139 PF02843 Phosphoribosylglycinamide synthetase, C domain XPG1_3139 PF02844 Phosphoribosylglycinamide synthetase, N domain XPG1_3140 PF07356 Protein of unknown function (DUF1481) XPG1_3141 PF00216 Bacterial DNA-binding protein XPG1_3142 PF04222 Protein of unknown function (DUF416) XPG1_3143 PF04493 Endonuclease V XPG1_3144 PF01208 Uroporphyrinogen decarboxylase (URO-D) XPG1_3145 PF00293 NUDIX domain XPG1_3145 PF09297 NADH pyrophosphatase zinc ribbon domain XPG1_3147 PF13667 ThiC-associated domain XPG1_3147 PF01964 Radical SAM ThiC family XPG1_3148 PF02581 Thiamine monophosphate synthase XPG1_3149 PF00899 ThiF family XPG1_3150 PF02597 ThiS family XPG1_3151 PF05690 Thiazole biosynthesis protein ThiG XPG1_3152 PF06968 Biotin and Thiamin Synthesis associated domain XPG1_3152 PF04055 Radical SAM superfamily XPG1_3154 PF07690 Major Facilitator Superfamily XPG1_3155 PF13419 Haloacid dehalogenase-like hydrolase XPG1_3156 PF00107 Zinc-binding dehydrogenase XPG1_3156 PF08240 Alcohol dehydrogenase GroES-like domain XPG1_3157 PF00202 Aminotransferase class-III XPG1_3158 PF00196 Bacterial regulatory proteins, luxR family XPG1_3158 PF17874 MalT-like TPR region XPG1_3159 PF00343 Carbohydrate phosphorylase XPG1_3160 PF02446 4-alpha-glucanotransferase XPG1_3161 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_3162 PF14785 Maltose transport system permease protein MalF P2 domain XPG1_3162 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_3163 PF01547 Bacterial extracellular solute-binding protein XPG1_3164 PF17912 MalK OB fold domain XPG1_3164 PF00005 ABC transporter XPG1_3165 PF02264 LamB porin XPG1_3166 PF07148 Maltose operon periplasmic protein precursor (MalM) XPG1_3167 PF05000 RNA polymerase Rpb1, domain 4 XPG1_3167 PF04983 RNA polymerase Rpb1, domain 3 XPG1_3167 PF04997 RNA polymerase Rpb1, domain 1 XPG1_3167 PF00623 RNA polymerase Rpb1, domain 2 XPG1_3167 PF04998 RNA polymerase Rpb1, domain 5 XPG1_3168 PF04565 RNA polymerase Rpb2, domain 3 XPG1_3168 PF04563 RNA polymerase beta subunit XPG1_3168 PF10385 RNA polymerase beta subunit external 1 domain XPG1_3168 PF04560 RNA polymerase Rpb2, domain 7 XPG1_3168 PF04561 RNA polymerase Rpb2, domain 2 XPG1_3168 PF00562 RNA polymerase Rpb2, domain 6 XPG1_3169 PF00542 Ribosomal protein L7/L12 C-terminal domain XPG1_3169 PF16320 Ribosomal protein L7/L12 dimerisation domain XPG1_3170 PF00466 Ribosomal protein L10 XPG1_3171 PF00687 Ribosomal protein L1p/L10e family XPG1_3172 PF03946 Ribosomal protein L11, N-terminal domain XPG1_3172 PF00298 Ribosomal protein L11, RNA binding domain XPG1_3173 PF00467 KOW motif XPG1_3173 PF02357 Transcription termination factor nusG XPG1_3174 PF00584 SecE/Sec61-gamma subunits of protein translocation complex XPG1_3175 PF00009 Elongation factor Tu GTP binding domain XPG1_3175 PF03144 Elongation factor Tu domain 2 XPG1_3175 PF03143 Elongation factor Tu C-terminal domain XPG1_3176 PF00679 Elongation factor G C-terminus XPG1_3176 PF14492 Elongation Factor G, domain II XPG1_3176 PF03764 Elongation factor G, domain IV XPG1_3176 PF00009 Elongation factor Tu GTP binding domain XPG1_3176 PF03144 Elongation factor Tu domain 2 XPG1_3177 PF00177 Ribosomal protein S7p/S5e XPG1_3178 PF00164 Ribosomal protein S12/S23 XPG1_3179 PF04077 DsrH like protein XPG1_3180 PF02635 DsrE/DsrF-like family XPG1_3181 PF02635 DsrE/DsrF-like family XPG1_3182 PF08348 YheO-like PAS domain XPG1_3182 PF13309 HTH domain XPG1_3183 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XPG1_3183 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XPG1_3184 PF04102 SlyX XPG1_3185 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XPG1_3187 PF09526 Probable metal-binding protein (DUF2387) XPG1_3189 PF12848 ABC transporter XPG1_3189 PF00005 ABC transporter XPG1_3190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_3190 PF03466 LysR substrate binding domain XPG1_3194 PF13580 SIS domain XPG1_3195 PF01810 LysE type translocator XPG1_3197 PF06794 Uncharacterised protein family (UPF0270) XPG1_3198 PF00485 Phosphoribulokinase / Uridine kinase family XPG1_3199 PF13545 Crp-like helix-turn-helix domain XPG1_3199 PF00027 Cyclic nucleotide-binding domain XPG1_3200 PF00117 Glutamine amidotransferase class-I XPG1_3201 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XPG1_3202 PF01926 50S ribosome-binding GTPase XPG1_3203 PF01367 5'-3' exonuclease, C-terminal SAM fold XPG1_3203 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XPG1_3203 PF00476 DNA polymerase family A XPG1_3203 PF01612 3'-5' exonuclease XPG1_3204 PF01323 DSBA-like thioredoxin domain XPG1_3205 PF01636 Phosphotransferase enzyme family XPG1_3206 PF06288 Protein of unknown function (DUF1040) XPG1_3207 PF12804 MobA-like NTP transferase domain XPG1_3208 PF03205 Molybdopterin guanine dinucleotide synthesis protein B XPG1_3209 PF03466 LysR substrate binding domain XPG1_3209 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_3210 PF00892 EamA-like transporter family XPG1_3211 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XPG1_3211 PF07992 Pyridine nucleotide-disulphide oxidoreductase XPG1_3212 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ XPG1_3214 PF02371 Transposase IS116/IS110/IS902 family XPG1_3214 PF01548 Transposase XPG1_3224 PF01548 Transposase XPG1_3224 PF02371 Transposase IS116/IS110/IS902 family XPG1_3227 PF03050 Transposase IS66 family XPG1_3227 PF13817 IS66 C-terminal element XPG1_3227 PF13007 Transposase C of IS166 homeodomain XPG1_3227 PF13005 zinc-finger binding domain of transposase IS66 XPG1_3229 PF03527 RHS protein XPG1_3229 PF05593 RHS Repeat XPG1_3230 PF13495 Phage integrase, N-terminal SAM-like domain XPG1_3230 PF00589 Phage integrase family XPG1_3231 PF01807 CHC2 zinc finger XPG1_3231 PF08275 DNA primase catalytic core, N-terminal domain XPG1_3231 PF10410 DnaB-helicase binding domain of primase XPG1_3232 PF01381 Helix-turn-helix XPG1_3232 PF00717 Peptidase S24-like XPG1_3235 PF05488 PAAR motif XPG1_3235 PF05593 RHS Repeat XPG1_3238 PF04717 Type VI secretion system, phage-baseplate injector XPG1_3240 PF02668 Taurine catabolism dioxygenase TauD, TfdA family XPG1_3243 PF00303 Thymidylate synthase XPG1_3244 PF01790 Prolipoprotein diacylglyceryl transferase XPG1_3246 PF01590 GAF domain XPG1_3246 PF05524 PEP-utilising enzyme, N-terminal XPG1_3246 PF00391 PEP-utilising enzyme, mobile domain XPG1_3246 PF02896 PEP-utilising enzyme, TIM barrel domain XPG1_3247 PF00293 NUDIX domain XPG1_3249 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_3250 PF00005 ABC transporter XPG1_3253 PF01609 Transposase DDE domain XPG1_3253 PF13808 DDE_Tnp_1-associated XPG1_3255 PF04393 Protein of unknown function (DUF535) XPG1_3257 PF07992 Pyridine nucleotide-disulphide oxidoreductase XPG1_3257 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XPG1_3258 PF00375 Sodium:dicarboxylate symporter family XPG1_3259 PF09335 SNARE associated Golgi protein XPG1_3262 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XPG1_3263 PF07690 Major Facilitator Superfamily XPG1_3264 PF01261 Xylose isomerase-like TIM barrel XPG1_3267 PF00474 Sodium:solute symporter family XPG1_3268 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XPG1_3268 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XPG1_3271 PF05957 Bacterial protein of unknown function (DUF883) XPG1_3272 PF07332 Putative Actinobacterial Holin-X, holin superfamily III XPG1_3274 PF07681 DoxX XPG1_3275 PF03466 LysR substrate binding domain XPG1_3275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_3276 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XPG1_3277 PF04348 LppC putative lipoprotein XPG1_3278 PF02021 Uncharacterised protein family UPF0102 XPG1_3279 PF13580 SIS domain XPG1_3280 PF04972 BON domain XPG1_3281 PF00912 Transglycosylase XPG1_3283 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XPG1_3283 PF00512 His Kinase A (phospho-acceptor) domain XPG1_3283 PF18415 Histidine kinase receptor ArcB trans-membrane domain XPG1_3283 PF00989 PAS fold XPG1_3283 PF00072 Response regulator receiver domain XPG1_3283 PF01627 Hpt domain XPG1_3284 PF04898 Glutamate synthase central domain XPG1_3284 PF00310 Glutamine amidotransferases class-II XPG1_3284 PF01493 GXGXG motif XPG1_3284 PF01645 Conserved region in glutamate synthase XPG1_3285 PF07992 Pyridine nucleotide-disulphide oxidoreductase XPG1_3285 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster XPG1_3287 PF04386 Stringent starvation protein B XPG1_3288 PF02798 Glutathione S-transferase, N-terminal domain XPG1_3288 PF00043 Glutathione S-transferase, C-terminal domain XPG1_3289 PF00380 Ribosomal protein S9/S16 XPG1_3290 PF00572 Ribosomal protein L13 XPG1_3291 PF03969 AFG1-like ATPase XPG1_3292 PF06295 Protein of unknown function (DUF1043) XPG1_3293 PF00595 PDZ domain XPG1_3293 PF13180 PDZ domain XPG1_3294 PF13180 PDZ domain XPG1_3295 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XPG1_3296 PF01722 BolA-like protein XPG1_3298 PF05494 MlaC protein XPG1_3299 PF02470 MlaD protein XPG1_3300 PF02405 Permease MlaE XPG1_3301 PF00005 ABC transporter XPG1_3302 PF01699 Sodium/calcium exchanger protein XPG1_3303 PF00571 CBS domain XPG1_3303 PF01380 SIS domain XPG1_3305 PF06835 Lipopolysaccharide-assembly, LptC-related XPG1_3306 PF03968 OstA-like protein XPG1_3307 PF00005 ABC transporter XPG1_3307 PF12399 Branched-chain amino acid ATP-binding cassette transporter XPG1_3308 PF04552 Sigma-54, DNA binding domain XPG1_3308 PF04963 Sigma-54 factor, core binding domain XPG1_3308 PF00309 Sigma-54 factor, Activator interacting domain (AID) XPG1_3309 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XPG1_3310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XPG1_3311 PF03668 P-loop ATPase protein family XPG1_3312 PF00381 PTS HPr component phosphorylation site XPG1_3315 PF01168 Alanine racemase, N-terminal domain XPG1_3315 PF00842 Alanine racemase, C-terminal domain XPG1_3316 PF14760 Rnk N-terminus XPG1_3316 PF01272 Transcription elongation factor, GreA/GreB, C-term XPG1_3317 PF01523 Putative modulator of DNA gyrase XPG1_3318 PF04751 Protein of unknown function (DUF615) XPG1_3320 PF00005 ABC transporter XPG1_3320 PF00664 ABC transporter transmembrane region XPG1_3320 PF03412 Peptidase C39 family XPG1_3325 PF13610 DDE domain XPG1_3326 PF13610 DDE domain XPG1_3327 PF01523 Putative modulator of DNA gyrase XPG1_3328 PF00795 Carbon-nitrogen hydrolase XPG1_3329 PF13502 AsmA-like C-terminal region XPG1_3329 PF13116 Protein of unknown function XPG1_3330 PF10150 Ribonuclease E/G family XPG1_3330 PF00575 S1 RNA binding domain XPG1_3331 PF02545 Maf-like protein XPG1_3332 PF04093 rod shape-determining protein MreD XPG1_3333 PF04085 rod shape-determining protein MreC XPG1_3335 PF00107 Zinc-binding dehydrogenase XPG1_3335 PF08240 Alcohol dehydrogenase GroES-like domain XPG1_3336 PF01220 Dehydroquinase class II XPG1_3337 PF00364 Biotin-requiring enzyme XPG1_3338 PF02785 Biotin carboxylase C-terminal domain XPG1_3338 PF00289 Biotin carboxylase, N-terminal domain XPG1_3338 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XPG1_3339 PF06196 Protein of unknown function (DUF997) XPG1_3340 PF00474 Sodium:solute symporter family XPG1_3342 PF01207 Dihydrouridine synthase (Dus) XPG1_3343 PF02954 Bacterial regulatory protein, Fis family XPG1_3344 PF03466 LysR substrate binding domain XPG1_3344 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_3345 PF07690 Major Facilitator Superfamily XPG1_3347 PF01593 Flavin containing amine oxidoreductase XPG1_3349 PF03466 LysR substrate binding domain XPG1_3349 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_3350 PF11924 Inverse autotransporter, beta-domain XPG1_3350 PF02369 Bacterial Ig-like domain (group 1) XPG1_3350 PF09134 Invasin, domain 3 XPG1_3352 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XPG1_3355 PF00497 Bacterial extracellular solute-binding proteins, family 3 XPG1_3361 PF00528 Binding-protein-dependent transport system inner membrane component XPG1_3362 PF00005 ABC transporter XPG1_3363 PF00497 Bacterial extracellular solute-binding proteins, family 3 XPG1_3364 PF06877 Regulator of ribonuclease activity B XPG1_3365 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XPG1_3365 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XPG1_3366 PF01053 Cys/Met metabolism PLP-dependent enzyme XPG1_3367 PF03553 Na+/H+ antiporter family XPG1_3368 PF00291 Pyridoxal-phosphate dependent enzyme XPG1_3370 PF00550 Phosphopantetheine attachment site XPG1_3370 PF00668 Condensation domain XPG1_3370 PF13193 AMP-binding enzyme C-terminal domain XPG1_3370 PF00501 AMP-binding enzyme XPG1_3372 PF01047 MarR family XPG1_3374 PF00176 SNF2 family N-terminal domain XPG1_3374 PF12137 RNA polymerase recycling family C-terminal XPG1_3374 PF18339 RapA N-terminal Tudor like domain 1 XPG1_3374 PF00271 Helicase conserved C-terminal domain XPG1_3374 PF18337 RapA N-terminal Tudor like domain XPG1_3375 PF00849 RNA pseudouridylate synthase XPG1_3376 PF00226 DnaJ domain XPG1_3376 PF05099 Tellurite resistance protein TerB XPG1_3377 PF04453 LPS transport system D XPG1_3377 PF03968 OstA-like protein XPG1_3378 PF09312 SurA N-terminal domain XPG1_3379 PF04166 Pyridoxal phosphate biosynthetic protein PdxA XPG1_3380 PF00398 Ribosomal RNA adenine dimethylase XPG1_3381 PF04379 ApaG domain XPG1_3382 PF00149 Calcineurin-like phosphoesterase XPG1_3383 PF00271 Helicase conserved C-terminal domain XPG1_3383 PF12343 Cold shock protein DEAD box A XPG1_3383 PF00270 DEAD/DEAH box helicase XPG1_3383 PF03880 DbpA RNA binding domain XPG1_3384 PF13181 Tetratricopeptide repeat XPG1_3384 PF07719 Tetratricopeptide repeat XPG1_3385 PF00013 KH domain XPG1_3385 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain XPG1_3385 PF03725 3' exoribonuclease family, domain 2 XPG1_3385 PF01138 3' exoribonuclease family, domain 1 XPG1_3385 PF00575 S1 RNA binding domain XPG1_3386 PF00312 Ribosomal protein S15 XPG1_3387 PF01509 TruB family pseudouridylate synthase (N terminal domain) XPG1_3387 PF09157 Pseudouridine synthase II TruB, C-terminal XPG1_3387 PF16198 tRNA pseudouridylate synthase B C-terminal domain XPG1_3388 PF02033 Ribosome-binding factor A XPG1_3389 PF00009 Elongation factor Tu GTP binding domain XPG1_3389 PF11987 Translation-initiation factor 2 XPG1_3389 PF08364 Bacterial translation initiation factor IF-2 associated region XPG1_3389 PF04760 Translation initiation factor IF-2, N-terminal region XPG1_3389 PF03144 Elongation factor Tu domain 2 XPG1_3390 PF13184 NusA-like KH domain XPG1_3390 PF00575 S1 RNA binding domain XPG1_3390 PF08529 NusA N-terminal domain XPG1_3391 PF02576 RimP N-terminal domain XPG1_3391 PF17384 RimP C-terminal SH3 domain XPG1_3392 PF03840 Preprotein translocase SecG subunit XPG1_3393 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XPG1_3393 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XPG1_3393 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XPG1_3393 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XPG1_3394 PF00809 Pterin binding enzyme XPG1_3395 PF00004 ATPase family associated with various cellular activities (AAA) XPG1_3395 PF06480 FtsH Extracellular XPG1_3395 PF01434 Peptidase family M41 XPG1_3395 PF17862 AAA+ lid domain XPG1_3396 PF01728 FtsJ-like methyltransferase XPG1_3397 PF01985 CRS1 / YhbY (CRM) domain XPG1_3398 PF03449 Transcription elongation factor, N-terminal XPG1_3398 PF01272 Transcription elongation factor, GreA/GreB, C-term XPG1_3399 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family XPG1_3400 PF01018 GTP1/OBG XPG1_3400 PF01926 50S ribosome-binding GTPase XPG1_3401 PF01016 Ribosomal L27 protein XPG1_3402 PF00829 Ribosomal prokaryotic L21 protein XPG1_3404 PF00348 Polyprenyl synthetase XPG1_3407 PF13693 Winged helix-turn-helix DNA-binding XPG1_3408 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XPG1_3408 PF00056 lactate/malate dehydrogenase, NAD binding domain XPG1_3409 PF02863 Arginine repressor, C-terminal domain XPG1_3409 PF01316 Arginine repressor, DNA binding domain XPG1_3410 PF01225 Mur ligase family, catalytic domain XPG1_3410 PF02875 Mur ligase family, glutamate ligase domain XPG1_3410 PF08245 Mur ligase middle domain XPG1_3411 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain XPG1_3412 PF02369 Bacterial Ig-like domain (group 1) XPG1_3412 PF11924 Inverse autotransporter, beta-domain XPG1_3412 PF01476 LysM domain XPG1_3412 PF07979 Intimin C-type lectin domain XPG1_3413 PF02369 Bacterial Ig-like domain (group 1) XPG1_3413 PF11924 Inverse autotransporter, beta-domain XPG1_3413 PF07979 Intimin C-type lectin domain XPG1_3413 PF01476 LysM domain XPG1_3414 PF00719 Inorganic pyrophosphatase XPG1_3415 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like XPG1_3416 PF04357 TamB, inner membrane protein subunit of TAM complex XPG1_3417 PF07244 Surface antigen variable number repeat XPG1_3417 PF01103 Surface antigen XPG1_3417 PF17243 POTRA domain TamA domain 1 XPG1_3418 PF01625 Peptide methionine sulfoxide reductase XPG1_3419 PF03471 Transporter associated domain XPG1_3419 PF00571 CBS domain XPG1_3419 PF01595 Cyclin M transmembrane N-terminal domain XPG1_3420 PF06526 Protein of unknown function (DUF1107) XPG1_3421 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) XPG1_3422 PF00459 Inositol monophosphatase family XPG1_3423 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XPG1_3423 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XPG1_3424 PF01281 Ribosomal protein L9, N-terminal domain XPG1_3424 PF03948 Ribosomal protein L9, C-terminal domain XPG1_3425 PF01084 Ribosomal protein S18 XPG1_3426 PF01250 Ribosomal protein S6 XPG1_3427 PF00588 SpoU rRNA Methylase family XPG1_3427 PF08032 RNA 2'-O ribose methyltransferase substrate binding XPG1_3428 PF17876 Cold shock domain XPG1_3428 PF08461 Ribonuclease R winged-helix domain XPG1_3428 PF08206 Ribonuclease B OB domain XPG1_3428 PF00575 S1 RNA binding domain XPG1_3428 PF00773 RNB domain XPG1_3429 PF02082 Transcriptional regulator XPG1_3430 PF00709 Adenylosuccinate synthetase XPG1_3431 PF01145 SPFH domain / Band 7 family XPG1_3432 PF12221 Bacterial membrane protein N terminal XPG1_3432 PF01145 SPFH domain / Band 7 family XPG1_3434 PF01926 50S ribosome-binding GTPase XPG1_3434 PF16360 GTP-binding GTPase Middle Region XPG1_3434 PF13167 GTP-binding GTPase N-terminal XPG1_3435 PF17209 Hfq protein XPG1_3437 PF01119 DNA mismatch repair protein, C-terminal domain XPG1_3437 PF08676 MutL C terminal dimerisation domain XPG1_3438 PF01520 N-acetylmuramoyl-L-alanine amidase XPG1_3439 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE XPG1_3440 PF08331 Domain of unknown function (DUF1730) XPG1_3444 PF00929 Exonuclease XPG1_3445 PF03193 RsgA GTPase XPG1_3446 PF02666 Phosphatidylserine decarboxylase XPG1_3447 PF00924 Mechanosensitive ion channel XPG1_3447 PF12794 Mechanosensitive ion channel inner membrane domain 1 XPG1_3447 PF12795 Mechanosensitive ion channel porin domain XPG1_3449 PF12146 Serine aminopeptidase, S33 XPG1_3450 PF16124 RecQ zinc-binding XPG1_3450 PF00570 HRDC domain XPG1_3450 PF00271 Helicase conserved C-terminal domain XPG1_3450 PF00270 DEAD/DEAH box helicase XPG1_3450 PF09382 RQC domain XPG1_3451 PF03061 Thioesterase superfamily XPG1_3452 PF00892 EamA-like transporter family XPG1_3454 PF07690 Major Facilitator Superfamily XPG1_3455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_3455 PF03466 LysR substrate binding domain XPG1_3456 PF13614 AAA domain XPG1_3457 PF01544 CorA-like Mg2+ transporter protein XPG1_3458 PF00580 UvrD/REP helicase N-terminal domain XPG1_3458 PF13361 UvrD-like helicase C-terminal domain XPG1_3459 PF13419 Haloacid dehalogenase-like hydrolase XPG1_3460 PF00589 Phage integrase family XPG1_3460 PF02899 Phage integrase, N-terminal SAM-like domain XPG1_3461 PF04340 Protein of unknown function, DUF484 XPG1_3462 PF01678 Diaminopimelate epimerase XPG1_3463 PF13627 Prokaryotic lipoprotein-attachment site XPG1_3464 PF01491 Frataxin-like domain XPG1_3465 PF12633 Adenylate cyclase NT domain XPG1_3465 PF01295 Adenylate cyclase, class-I XPG1_3466 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain XPG1_3466 PF03900 Porphobilinogen deaminase, C-terminal domain XPG1_3467 PF02602 Uroporphyrinogen-III synthase HemD XPG1_3468 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase XPG1_3469 PF07719 Tetratricopeptide repeat XPG1_3469 PF07219 HemY protein N-terminus XPG1_3472 PF00324 Amino acid permease XPG1_3473 PF03808 Glycosyl transferase WecB/TagA/CpsF family XPG1_3474 PF06899 WzyE protein, O-antigen assembly polymerase XPG1_3475 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 XPG1_3476 PF01943 Polysaccharide biosynthesis protein XPG1_3477 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XPG1_3479 PF00483 Nucleotidyl transferase XPG1_3480 PF16363 GDP-mannose 4,6 dehydratase XPG1_3481 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XPG1_3481 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XPG1_3481 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XPG1_3482 PF02350 UDP-N-acetylglucosamine 2-epimerase XPG1_3483 PF02706 Chain length determinant protein XPG1_3484 PF00953 Glycosyl transferase family 4 XPG1_3485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XPG1_3485 PF07498 Rho termination factor, N-terminal domain XPG1_3485 PF07497 Rho termination factor, RNA-binding domain XPG1_3486 PF00085 Thioredoxin XPG1_3487 PF00270 DEAD/DEAH box helicase XPG1_3487 PF00271 Helicase conserved C-terminal domain XPG1_3488 PF02541 Ppx/GppA phosphatase family XPG1_3489 PF00580 UvrD/REP helicase N-terminal domain XPG1_3489 PF13361 UvrD-like helicase C-terminal domain XPG1_3490 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain XPG1_3490 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain XPG1_3491 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_3491 PF03466 LysR substrate binding domain XPG1_3492 PF00291 Pyridoxal-phosphate dependent enzyme XPG1_3492 PF00585 C-terminal regulatory domain of Threonine dehydratase XPG1_3493 PF00920 Dehydratase family XPG1_3494 PF01063 Amino-transferase class IV XPG1_3496 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XPG1_3496 PF00205 Thiamine pyrophosphate enzyme, central domain XPG1_3496 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XPG1_3497 PF13335 Magnesium chelatase, subunit ChlI C-terminal XPG1_3497 PF01078 Magnesium chelatase, subunit ChlI XPG1_3498 PF04219 Protein of unknown function, DUF XPG1_3499 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_3499 PF03466 LysR substrate binding domain XPG1_3505 PF00132 Bacterial transferase hexapeptide (six repeats) XPG1_3506 PF07369 Protein of unknown function (DUF1488) XPG1_3507 PF08501 Shikimate dehydrogenase substrate binding domain XPG1_3507 PF01488 Shikimate / quinate 5-dehydrogenase XPG1_3507 PF18317 Shikimate 5'-dehydrogenase C-terminal domain XPG1_3508 PF01300 Telomere recombination XPG1_3509 PF01396 Topoisomerase DNA binding C4 zinc finger XPG1_3510 PF17782 DprA winged helix domain XPG1_3510 PF02481 DNA recombination-mediator protein A XPG1_3511 PF01327 Polypeptide deformylase XPG1_3512 PF02911 Formyl transferase, C-terminal domain XPG1_3512 PF00551 Formyl transferase XPG1_3513 PF01189 16S rRNA methyltransferase RsmB/F XPG1_3513 PF01029 NusB family XPG1_3514 PF02080 TrkA-C domain XPG1_3514 PF02254 TrkA-N domain XPG1_3516 PF03889 Alternative ribosome-rescue factor A XPG1_3517 PF13411 MerR HTH family regulatory protein XPG1_3518 PF01196 Ribosomal protein L17 XPG1_3519 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain XPG1_3519 PF01000 RNA polymerase Rpb3/RpoA insert domain XPG1_3519 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain XPG1_3520 PF01479 S4 domain XPG1_3520 PF00163 Ribosomal protein S4/S9 N-terminal domain XPG1_3521 PF00411 Ribosomal protein S11 XPG1_3522 PF00416 Ribosomal protein S13/S18 XPG1_3523 PF00444 Ribosomal protein L36 XPG1_3524 PF00344 SecY translocase XPG1_3525 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A XPG1_3526 PF00327 Ribosomal protein L30p/L7e XPG1_3527 PF03719 Ribosomal protein S5, C-terminal domain XPG1_3527 PF00333 Ribosomal protein S5, N-terminal domain XPG1_3528 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast XPG1_3529 PF00347 Ribosomal protein L6 XPG1_3530 PF00410 Ribosomal protein S8 XPG1_3531 PF00253 Ribosomal protein S14p/S29e XPG1_3532 PF00673 ribosomal L5P family C-terminus XPG1_3532 PF00281 Ribosomal protein L5 XPG1_3533 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 XPG1_3533 PF00467 KOW motif XPG1_3534 PF00238 Ribosomal protein L14p/L23e XPG1_3535 PF00366 Ribosomal protein S17 XPG1_3536 PF00831 Ribosomal L29 protein XPG1_3537 PF00252 Ribosomal protein L16p/L10e XPG1_3538 PF00189 Ribosomal protein S3, C-terminal domain XPG1_3538 PF07650 KH domain XPG1_3539 PF00237 Ribosomal protein L22p/L17e XPG1_3540 PF00203 Ribosomal protein S19 XPG1_3541 PF03947 Ribosomal Proteins L2, C-terminal domain XPG1_3541 PF00181 Ribosomal Proteins L2, RNA binding domain XPG1_3542 PF00276 Ribosomal protein L23 XPG1_3543 PF00573 Ribosomal protein L4/L1 family XPG1_3544 PF00297 Ribosomal protein L3 XPG1_3545 PF00338 Ribosomal protein S10p/S20e XPG1_3546 PF00210 Ferritin-like domain XPG1_3547 PF03143 Elongation factor Tu C-terminal domain XPG1_3547 PF03144 Elongation factor Tu domain 2 XPG1_3547 PF00009 Elongation factor Tu GTP binding domain XPG1_3549 PF00485 Phosphoribulokinase / Uridine kinase family XPG1_3550 PF13333 Integrase core domain XPG1_3550 PF00665 Integrase core domain XPG1_3550 PF13276 HTH-like domain XPG1_3552 PF08279 HTH domain XPG1_3552 PF03099 Biotin/lipoate A/B protein ligase family XPG1_3552 PF02237 Biotin protein ligase C terminal domain XPG1_3553 PF01565 FAD binding domain XPG1_3553 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain XPG1_3561 PF01177 Asp/Glu/Hydantoin racemase XPG1_3562 PF07715 TonB-dependent Receptor Plug Domain XPG1_3562 PF00593 TonB dependent receptor XPG1_3563 PF05958 tRNA (Uracil-5-)-methyltransferase XPG1_3564 PF00440 Bacterial regulatory proteins, tetR family XPG1_3565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XPG1_3565 PF07992 Pyridine nucleotide-disulphide oxidoreductase XPG1_3566 PF03466 LysR substrate binding domain XPG1_3566 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XPG1_3568 PF14698 Argininosuccinate lyase C-terminal XPG1_3568 PF00206 Lyase XPG1_3569 PF00764 Arginosuccinate synthase XPG1_3570 PF00696 Amino acid kinase family XPG1_3571 PF02774 Semialdehyde dehydrogenase, dimerisation domain XPG1_3571 PF01118 Semialdehyde dehydrogenase, NAD binding domain XPG1_3572 PF01546 Peptidase family M20/M25/M40 XPG1_3572 PF07687 Peptidase dimerisation domain XPG1_3573 PF02219 Methylenetetrahydrofolate reductase XPG1_3574 PF00311 Phosphoenolpyruvate carboxylase XPG1_3575 PF03447 Homoserine dehydrogenase, NAD binding domain XPG1_3575 PF00742 Homoserine dehydrogenase XPG1_3575 PF00696 Amino acid kinase family XPG1_3576 PF01053 Cys/Met metabolism PLP-dependent enzyme XPG1_3577 PF01340 Met Apo-repressor, MetJ XPG1_3578 PF01197 Ribosomal protein L31 XPG1_3579 PF00271 Helicase conserved C-terminal domain XPG1_3579 PF00270 DEAD/DEAH box helicase XPG1_3579 PF18319 PriA DNA helicase Cys-rich region (CRR) domain XPG1_3579 PF18074 Primosomal protein N C-terminal domain XPG1_3579 PF17764 3′ DNA-binding domain (3′BD) XPG1_3580 PF00356 Bacterial regulatory proteins, lacI family XPG1_3581 PF05036 Sporulation related domain XPG1_3582 PF00227 Proteasome subunit XPG1_3583 PF10431 C-terminal, D2-small domain, of ClpB protein XPG1_3583 PF07724 AAA domain (Cdc48 subfamily) XPG1_3583 PF00004 ATPase family associated with various cellular activities (AAA) XPG1_3584 PF01040 UbiA prenyltransferase family XPG1_3585 PF03737 Aldolase/RraA XPG1_3586 PF06005 Cell division protein ZapB XPG1_3587 PF00230 Major intrinsic protein XPG1_3588 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XPG1_3588 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XPG1_3589 PF00175 Oxidoreductase NAD-binding domain XPG1_3589 PF00970 Oxidoreductase FAD-binding domain XPG1_3590 PF05656 Protein of unknown function (DUF805) XPG1_3591 PF07305 Protein of unknown function (DUF1454) XPG1_3592 PF00121 Triosephosphate isomerase XPG1_3595 PF00365 Phosphofructokinase XPG1_3596 PF16916 Dimerisation domain of Zinc Transporter XPG1_3596 PF01545 Cation efflux family XPG1_3597 PF04932 O-Antigen ligase XPG1_3598 PF00534 Glycosyl transferases group 1 XPG1_3600 PF00072 Response regulator receiver domain XPG1_3600 PF00486 Transcriptional regulatory protein, C terminal XPG1_3601 PF16527 Two-component sensor protein CpxA, periplasmic domain XPG1_3601 PF00512 His Kinase A (phospho-acceptor) domain XPG1_3601 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XPG1_3601 PF00672 HAMP domain XPG1_3602 PF16363 GDP-mannose 4,6 dehydratase XPG1_3606 PF00294 pfkB family carbohydrate kinase XPG1_3606 PF01467 Cytidylyltransferase-like XPG1_3611 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase XPG1_3614 PF00535 Glycosyl transferase family 2 XPG1_3615 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XPG1_3616 PF02397 Bacterial sugar transferase XPG1_3617 PF02719 Polysaccharide biosynthesis protein XPG1_3618 PF00588 SpoU rRNA Methylase family XPG1_3619 PF00132 Bacterial transferase hexapeptide (six repeats) XPG1_3619 PF06426 Serine acetyltransferase, N-terminal XPG1_3620 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus XPG1_3620 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus XPG1_3621 PF02556 Preprotein translocase subunit SecB XPG1_3622 PF00581 Rhodanese-like domain XPG1_3623 PF01551 Peptidase family M23 XPG1_3625 PF04748 Divergent polysaccharide deacetylase XPG1_3626 PF00107 Zinc-binding dehydrogenase XPG1_3626 PF08240 Alcohol dehydrogenase GroES-like domain XPG1_3627 PF00155 Aminotransferase class I and II XPG1_3628 PF01370 NAD dependent epimerase/dehydratase family XPG1_3629 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XPG1_3630 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XPG1_3632 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XPG1_3634 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XPG1_3635 PF00534 Glycosyl transferases group 1 XPG1_3635 PF13439 Glycosyltransferase Family 4 XPG1_3636 PF00534 Glycosyl transferases group 1 XPG1_3636 PF13439 Glycosyltransferase Family 4 XPG1_3637 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) XPG1_3638 PF00535 Glycosyl transferase family 2 XPG1_3639 PF01467 Cytidylyltransferase-like XPG1_3640 PF06827 Zinc finger found in FPG and IleRS XPG1_3640 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XPG1_3640 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XPG1_3642 PF00534 Glycosyl transferases group 1 XPG1_3642 PF13439 Glycosyltransferase Family 4 XPG1_3645 PF00534 Glycosyl transferases group 1 XPG1_3646 PF00471 Ribosomal protein L33 XPG1_3647 PF00830 Ribosomal L28 family XPG1_3648 PF04002 RadC-like JAB domain XPG1_3650 PF04127 DNA / pantothenate metabolism flavoprotein XPG1_3650 PF02441 Flavoprotein XPG1_3651 PF00692 dUTPase XPG1_3652 PF00440 Bacterial regulatory proteins, tetR family XPG1_3653 PF00156 Phosphoribosyl transferase domain XPG1_3654 PF01138 3' exoribonuclease family, domain 1 XPG1_3654 PF03725 3' exoribonuclease family, domain 2 XPG1_3655 PF08340 Domain of unknown function (DUF1732) XPG1_3655 PF03755 YicC-like family, N-terminal region XPG1_3656 PF13356 Arm DNA-binding domain XPG1_3656 PF00589 Phage integrase family XPG1_3656 PF14659 Phage integrase, N-terminal SAM-like domain XPG1_3660 PF03400 IS1 transposase XPG1_3661 PF03811 InsA N-terminal domain XPG1_3661 PF12759 InsA C-terminal domain XPG1_3674 PF01609 Transposase DDE domain XPG1_3674 PF13808 DDE_Tnp_1-associated XPG1_3676 PF04536 TPM domain XPG1_3677 PF07690 Major Facilitator Superfamily XPG1_3679 PF00884 Sulfatase XPG1_3680 PF03144 Elongation factor Tu domain 2 XPG1_3680 PF09107 Elongation factor SelB, winged helix XPG1_3680 PF00009 Elongation factor Tu GTP binding domain XPG1_3680 PF09106 Elongation factor SelB, winged helix XPG1_3681 PF03841 L-seryl-tRNA selenium transferase XPG1_3681 PF12390 Selenocysteine synthase N terminal XPG1_3682 PF04216 Protein involved in formate dehydrogenase formation XPG1_3684 PF00209 Sodium:neurotransmitter symporter family XPG1_3685 PF01292 Prokaryotic cytochrome b561 XPG1_3690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XPG1_3690 PF00384 Molybdopterin oxidoreductase XPG1_3690 PF01568 Molydopterin dinucleotide binding domain XPG1_3692 PF01921 tRNA synthetases class I (K) XPG1_3694 PF02634 FdhD/NarQ family XPG1_3701 PF03544 Gram-negative bacterial TonB protein C-terminal XPG1_3702 PF02525 Flavodoxin-like fold XPG1_3703 PF00106 short chain dehydrogenase XPG1_3705 PF00202 Aminotransferase class-III XPG1_3707 PF00109 Beta-ketoacyl synthase, N-terminal domain XPG1_3707 PF02801 Beta-ketoacyl synthase, C-terminal domain XPG1_3709 PF00109 Beta-ketoacyl synthase, N-terminal domain XPG1_3709 PF02801 Beta-ketoacyl synthase, C-terminal domain XPG1_3710 PF00550 Phosphopantetheine attachment site XPG1_3711 PF10396 GTP-binding protein TrmE N-terminus XPG1_3711 PF12631 MnmE helical domain XPG1_3711 PF01926 50S ribosome-binding GTPase XPG1_3712 PF14849 YidC periplasmic domain XPG1_3712 PF02096 60Kd inner membrane protein XPG1_3713 PF01809 Putative membrane protein insertion efficiency factor XPG1_3714 PF00825 Ribonuclease P XPG1_3715 PF00468 Ribosomal protein L34 XPG1_CDS2277925R PF08173 Membrane bound YbgT-like protein