XFFB_00075	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
XFFB_00095	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
XFFB_00095	PWY-6164	3-dehydroquinate biosynthesis I
XFFB_00095	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
XFFB_00140	PWY-5686	UMP biosynthesis
XFFB_00140	PWY-7790	XFFB_00140
XFFB_00140	PWY-7791	XFFB_00140
XFFB_00145	PWY-5913	TCA cycle VI (obligate autotrophs)
XFFB_00145	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
XFFB_00145	PWY-6638	sulfolactate degradation III
XFFB_00145	PWY-6642	(<i>R</i>)-cysteate degradation
XFFB_00145	PWY-6643	coenzyme M biosynthesis II
XFFB_00145	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XFFB_00145	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XFFB_00145	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XFFB_00195	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XFFB_00195	PWY-6416	quinate degradation II
XFFB_00195	PWY-6707	gallate biosynthesis
XFFB_00250	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
XFFB_00370	PWY-2781	<i>cis</i>-zeatin biosynthesis
XFFB_00375	PWY-6614	tetrahydrofolate biosynthesis
XFFB_00405	PWY-5101	L-isoleucine biosynthesis II
XFFB_00405	PWY-5103	L-isoleucine biosynthesis III
XFFB_00405	PWY-5104	L-isoleucine biosynthesis IV
XFFB_00405	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XFFB_00435	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
XFFB_00440	PWY-6807	xyloglucan degradation II (exoglucanase)
XFFB_00455	PWY-6829	tRNA methylation (yeast)
XFFB_00455	PWY-7285	methylwyosine biosynthesis
XFFB_00455	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
XFFB_00465	PWY-7799	XFFB_00465
XFFB_00465	PWY-7800	XFFB_00465
XFFB_00495	PWY-723	alkylnitronates degradation
XFFB_00590	PWY-6749	CMP-legionaminate biosynthesis I
XFFB_00605	PWY-40	putrescine biosynthesis I
XFFB_00605	PWY-43	putrescine biosynthesis II
XFFB_00605	PWY-6305	putrescine biosynthesis IV
XFFB_00605	PWY-6834	spermidine biosynthesis III
XFFB_00630	PWY-7851	XFFB_00630
XFFB_00640	PWY-6749	CMP-legionaminate biosynthesis I
XFFB_00650	PWY-5686	UMP biosynthesis
XFFB_00650	PWY-7790	XFFB_00650
XFFB_00650	PWY-7791	XFFB_00650
XFFB_00870	PWY-4381	fatty acid biosynthesis initiation I
XFFB_00870	PWY-5743	3-hydroxypropanoate cycle
XFFB_00870	PWY-5744	glyoxylate assimilation
XFFB_00870	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XFFB_00870	PWY-6722	candicidin biosynthesis
XFFB_00880	PWY-6123	inosine-5'-phosphate biosynthesis I
XFFB_00880	PWY-6124	inosine-5'-phosphate biosynthesis II
XFFB_00880	PWY-7234	inosine-5'-phosphate biosynthesis III
XFFB_00890	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XFFB_00890	PWY-5723	Rubisco shunt
XFFB_00895	PWY-5958	acridone alkaloid biosynthesis
XFFB_00895	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
XFFB_00895	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
XFFB_00900	PWY-5958	acridone alkaloid biosynthesis
XFFB_00900	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
XFFB_00900	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
XFFB_00945	PWY-6700	queuosine biosynthesis
XFFB_00975	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
XFFB_00975	PWY-6148	tetrahydromethanopterin biosynthesis
XFFB_00975	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
XFFB_00975	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
XFFB_00975	PWY-7852	XFFB_00975
XFFB_00975	PWY-7853	XFFB_00975
XFFB_00980	PWY-6654	phosphopantothenate biosynthesis III
XFFB_00990	PWY-5155	&beta;-alanine biosynthesis III
XFFB_01110	PWY-3221	dTDP-L-rhamnose biosynthesis II
XFFB_01110	PWY-6808	dTDP-D-forosamine biosynthesis
XFFB_01110	PWY-6942	dTDP-D-desosamine biosynthesis
XFFB_01110	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
XFFB_01110	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
XFFB_01110	PWY-6974	dTDP-L-olivose biosynthesis
XFFB_01110	PWY-6976	dTDP-L-mycarose biosynthesis
XFFB_01110	PWY-7104	dTDP-L-megosamine biosynthesis
XFFB_01110	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
XFFB_01110	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
XFFB_01110	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
XFFB_01110	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
XFFB_01110	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
XFFB_01110	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
XFFB_01110	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
XFFB_01110	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
XFFB_01110	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
XFFB_01110	PWY-7688	XFFB_01110
XFFB_01110	PWY-7814	XFFB_01110
XFFB_01125	PWY-5659	GDP-mannose biosynthesis
XFFB_01125	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
XFFB_01130	PWY-6749	CMP-legionaminate biosynthesis I
XFFB_01175	PWY-1042	glycolysis IV (plant cytosol)
XFFB_01175	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XFFB_01175	PWY-5484	glycolysis II (from fructose 6-phosphate)
XFFB_01175	PWY-7385	1,3-propanediol biosynthesis (engineered)
XFFB_01180	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XFFB_01185	PWY-7883	XFFB_01185
XFFB_01250	PWY-5747	2-methylcitrate cycle II
XFFB_01310	PWY-1042	glycolysis IV (plant cytosol)
XFFB_01310	PWY-5484	glycolysis II (from fructose 6-phosphate)
XFFB_01310	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XFFB_01310	PWY-7003	glycerol degradation to butanol
XFFB_01395	PWY-5676	acetyl-CoA fermentation to butanoate II
XFFB_01395	PWY-5741	ethylmalonyl-CoA pathway
XFFB_01395	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
XFFB_01395	PWY-7948	XFFB_01395
XFFB_01550	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XFFB_01550	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
XFFB_01550	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XFFB_01550	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XFFB_01595	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
XFFB_01595	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
XFFB_01595	PWY-6897	thiamin salvage II
XFFB_01595	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
XFFB_01595	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
XFFB_01595	PWY-7356	thiamin salvage IV (yeast)
XFFB_01595	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
XFFB_01645	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
XFFB_01645	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
XFFB_01830	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
XFFB_01830	PWY-6148	tetrahydromethanopterin biosynthesis
XFFB_01830	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
XFFB_01830	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
XFFB_01855	PWY-5669	phosphatidylethanolamine biosynthesis I
XFFB_01905	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XFFB_01910	PWY-1042	glycolysis IV (plant cytosol)
XFFB_01910	PWY-5484	glycolysis II (from fructose 6-phosphate)
XFFB_01910	PWY-6901	superpathway of glucose and xylose degradation
XFFB_01910	PWY-7003	glycerol degradation to butanol
XFFB_01915	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
XFFB_01915	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
XFFB_01915	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XFFB_01915	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
XFFB_01915	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
XFFB_01915	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
XFFB_01915	PWY-7205	CMP phosphorylation
XFFB_01915	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
XFFB_01915	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XFFB_01915	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
XFFB_01915	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XFFB_01915	PWY-7224	purine deoxyribonucleosides salvage
XFFB_01915	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
XFFB_01915	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
XFFB_02370	PWY-5971	palmitate biosynthesis II (bacteria and plants)
XFFB_02370	PWY-5973	<i>cis</i>-vaccenate biosynthesis
XFFB_02370	PWY-5989	stearate biosynthesis II (bacteria and plants)
XFFB_02370	PWY-5994	palmitate biosynthesis I (animals and fungi)
XFFB_02370	PWY-6113	superpathway of mycolate biosynthesis
XFFB_02370	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
XFFB_02370	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XFFB_02370	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XFFB_02370	PWY-7663	gondoate biosynthesis (anaerobic)
XFFB_02370	PWY-7664	oleate biosynthesis IV (anaerobic)
XFFB_02370	PWY-7858	XFFB_02370
XFFB_02370	PWYG-321	mycolate biosynthesis
XFFB_02405	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
XFFB_02405	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
XFFB_02410	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
XFFB_02410	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
XFFB_02410	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
XFFB_02505	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
XFFB_02505	PWY-5739	GDP-D-perosamine biosynthesis
XFFB_02505	PWY-5740	GDP-L-colitose biosynthesis
XFFB_02505	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
XFFB_02505	PWY-7573	GDP-mycosamine biosynthesis
XFFB_02560	PWY-6910	hydroxymethylpyrimidine salvage
XFFB_02560	PWY-7356	thiamin salvage IV (yeast)
XFFB_02560	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
XFFB_02565	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XFFB_02750	PWY-6891	thiazole biosynthesis II (Bacillus)
XFFB_02750	PWY-6892	thiazole biosynthesis I (E. coli)
XFFB_02750	PWY-7560	methylerythritol phosphate pathway II
XFFB_02755	PWY-4381	fatty acid biosynthesis initiation I
XFFB_02755	PWY-6799	fatty acid biosynthesis (plant mitochondria)
XFFB_02755	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XFFB_02760	PWY-5367	petroselinate biosynthesis
XFFB_02760	PWY-5971	palmitate biosynthesis II (bacteria and plants)
XFFB_02760	PWY-5973	<i>cis</i>-vaccenate biosynthesis
XFFB_02760	PWY-5989	stearate biosynthesis II (bacteria and plants)
XFFB_02760	PWY-5994	palmitate biosynthesis I (animals and fungi)
XFFB_02760	PWY-6113	superpathway of mycolate biosynthesis
XFFB_02760	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
XFFB_02760	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XFFB_02760	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XFFB_02760	PWY-7663	gondoate biosynthesis (anaerobic)
XFFB_02760	PWY-7664	oleate biosynthesis IV (anaerobic)
XFFB_02760	PWY-7858	XFFB_02760
XFFB_02760	PWYG-321	mycolate biosynthesis
XFFB_02805	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
XFFB_02810	PWY-2301	<i>myo</i>-inositol biosynthesis
XFFB_02810	PWY-4702	phytate degradation I
XFFB_02810	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
XFFB_02835	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
XFFB_02835	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
XFFB_02835	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
XFFB_02835	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
XFFB_02835	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
XFFB_02835	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
XFFB_02835	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
XFFB_02835	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
XFFB_02835	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
XFFB_02835	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
XFFB_02840	PWY-181	photorespiration
XFFB_02960	PWY-5941	glycogen degradation II (eukaryotic)
XFFB_02960	PWY-6724	starch degradation II
XFFB_02960	PWY-6737	starch degradation V
XFFB_02960	PWY-7238	sucrose biosynthesis II
XFFB_02975	PWY-43	putrescine biosynthesis II
XFFB_02985	PWY-7205	CMP phosphorylation
XFFB_03010	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XFFB_03010	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XFFB_03010	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XFFB_03020	PWY-3801	sucrose degradation II (sucrose synthase)
XFFB_03020	PWY-6527	stachyose degradation
XFFB_03020	PWY-7238	sucrose biosynthesis II
XFFB_03020	PWY-7343	UDP-glucose biosynthesis
XFFB_03020	PWY-7817	XFFB_03020
XFFB_03025	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
XFFB_03025	PWY-2201	folate transformations I
XFFB_03025	PWY-3841	folate transformations II
XFFB_03025	PWY-5030	L-histidine degradation III
XFFB_03025	PWY-5497	purine nucleobases degradation II (anaerobic)
XFFB_03025	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
XFFB_03025	PWY-7909	XFFB_03025
XFFB_03030	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
XFFB_03030	PWY-6596	adenosine nucleotides degradation I
XFFB_03030	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
XFFB_03035	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
XFFB_03080	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
XFFB_03080	PWY-6167	flavin biosynthesis II (archaea)
XFFB_03080	PWY-6168	flavin biosynthesis III (fungi)
XFFB_03080	PWY-7863	XFFB_03080
XFFB_03090	PWY-7884	XFFB_03090
XFFB_03095	PWY-7560	methylerythritol phosphate pathway II
XFFB_03240	PWY-7396	butanol and isobutanol biosynthesis (engineered)
XFFB_03255	PWY-6655	xanthan biosynthesis
XFFB_03255	PWY-6658	acetan biosynthesis
XFFB_03380	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
XFFB_03390	PWY-7039	phosphatidate metabolism, as a signaling molecule
XFFB_03390	PWY-7817	XFFB_03390
XFFB_03400	PWY-3841	folate transformations II
XFFB_03400	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XFFB_03400	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
XFFB_03400	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
XFFB_03400	PWY-7199	pyrimidine deoxyribonucleosides salvage
XFFB_03400	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
XFFB_03405	PWY-3841	folate transformations II
XFFB_03405	PWY-6614	tetrahydrofolate biosynthesis
XFFB_03435	PWY-3461	L-tyrosine biosynthesis II
XFFB_03435	PWY-3462	L-phenylalanine biosynthesis II
XFFB_03435	PWY-6120	L-tyrosine biosynthesis III
XFFB_03435	PWY-6627	salinosporamide A biosynthesis
XFFB_03435	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
XFFB_03435	PWY-7626	bacilysin biosynthesis
XFFB_03440	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XFFB_03500	PWY-5269	cardiolipin biosynthesis II
XFFB_03500	PWY-5668	cardiolipin biosynthesis I
XFFB_03500	PWY-7817	XFFB_03500
XFFB_03520	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XFFB_03520	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
XFFB_03540	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XFFB_03550	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
XFFB_03605	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
XFFB_03650	PWY-6700	queuosine biosynthesis
XFFB_03655	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
XFFB_03655	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
XFFB_03655	PWY-6936	seleno-amino acid biosynthesis
XFFB_03655	PWY-702	L-methionine biosynthesis II
XFFB_03670	PWY-4261	glycerol degradation I
XFFB_03680	PWY-4261	glycerol degradation I
XFFB_03680	PWY-6118	glycerol-3-phosphate shuttle
XFFB_03680	PWY-6952	glycerophosphodiester degradation
XFFB_03715	PWY-5108	L-isoleucine biosynthesis V
XFFB_03715	PWY-5132	humulone biosynthesis
XFFB_03715	PWY-5133	cohumulone biosynthesis
XFFB_03715	PWY-6672	<i>cis</i>-genanyl-CoA degradation
XFFB_03715	PWY-7118	chitin degradation to ethanol
XFFB_03715	PWY-7857	XFFB_03715
XFFB_03730	PWY-6891	thiazole biosynthesis II (Bacillus)
XFFB_03730	PWY-6892	thiazole biosynthesis I (E. coli)
XFFB_03730	PWY-7560	methylerythritol phosphate pathway II
XFFB_03815	PWY-5506	methanol oxidation to formaldehyde IV
XFFB_03825	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XFFB_03825	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XFFB_03840	PWY-5686	UMP biosynthesis
XFFB_03840	PWY-7790	XFFB_03840
XFFB_03840	PWY-7791	XFFB_03840
XFFB_03845	PWY-2941	L-lysine biosynthesis II
XFFB_03845	PWY-2942	L-lysine biosynthesis III
XFFB_03845	PWY-5097	L-lysine biosynthesis VI
XFFB_03845	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
XFFB_03845	PWY-6559	spermidine biosynthesis II
XFFB_03845	PWY-6562	norspermidine biosynthesis
XFFB_03845	PWY-7153	grixazone biosynthesis
XFFB_03845	PWY-7977	XFFB_03845
XFFB_03850	PWY-702	L-methionine biosynthesis II
XFFB_03915	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
XFFB_03915	PWY-5389	3-methylthiopropanoate biosynthesis
XFFB_03920	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
XFFB_04150	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
XFFB_04150	PWY-7820	XFFB_04150
XFFB_04180	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XFFB_04180	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XFFB_04230	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XFFB_04230	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
XFFB_04315	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XFFB_04315	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
XFFB_04315	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XFFB_04315	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XFFB_04325	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XFFB_04720	PWY-3961	phosphopantothenate biosynthesis II
XFFB_04725	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
XFFB_04725	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
XFFB_04740	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XFFB_04740	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
XFFB_04760	PWY-5667	CDP-diacylglycerol biosynthesis I
XFFB_04760	PWY-5981	CDP-diacylglycerol biosynthesis III
XFFB_04760	PWY-7902	XFFB_04760
XFFB_04845	PWY-4381	fatty acid biosynthesis initiation I
XFFB_04850	PWY-6871	3-methylbutanol biosynthesis
XFFB_04865	PWY-5101	L-isoleucine biosynthesis II
XFFB_04865	PWY-5103	L-isoleucine biosynthesis III
XFFB_04865	PWY-5104	L-isoleucine biosynthesis IV
XFFB_04865	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
XFFB_04865	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
XFFB_04865	PWY-6389	(<i>S</i>)-acetoin biosynthesis
XFFB_04865	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XFFB_04870	PWY-5103	L-isoleucine biosynthesis III
XFFB_04870	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XFFB_04905	PWY-2201	folate transformations I
XFFB_04905	PWY-5497	purine nucleobases degradation II (anaerobic)
XFFB_04905	PWY-7909	XFFB_04905
XFFB_04925	PWY-5971	palmitate biosynthesis II (bacteria and plants)
XFFB_04925	PWY-5973	<i>cis</i>-vaccenate biosynthesis
XFFB_04925	PWY-5989	stearate biosynthesis II (bacteria and plants)
XFFB_04925	PWY-6113	superpathway of mycolate biosynthesis
XFFB_04925	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
XFFB_04925	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XFFB_04925	PWY-7663	gondoate biosynthesis (anaerobic)
XFFB_04925	PWY-7664	oleate biosynthesis IV (anaerobic)
XFFB_04925	PWY-7858	XFFB_04925
XFFB_04925	PWYG-321	mycolate biosynthesis
XFFB_05290	PWY-381	nitrate reduction II (assimilatory)
XFFB_05290	PWY-5675	nitrate reduction V (assimilatory)
XFFB_05290	PWY-6549	L-glutamine biosynthesis III
XFFB_05290	PWY-6963	ammonia assimilation cycle I
XFFB_05290	PWY-6964	ammonia assimilation cycle II
XFFB_05345	PWY-5392	reductive TCA cycle II
XFFB_05345	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
XFFB_05345	PWY-5690	TCA cycle II (plants and fungi)
XFFB_05345	PWY-5913	TCA cycle VI (obligate autotrophs)
XFFB_05345	PWY-6728	methylaspartate cycle
XFFB_05345	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XFFB_05345	PWY-7254	TCA cycle VII (acetate-producers)
XFFB_05345	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XFFB_05355	PWY-6703	preQ<sub>0</sub> biosynthesis
XFFB_05505	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
XFFB_05530	PWY-1622	formaldehyde assimilation I (serine pathway)
XFFB_05530	PWY-5484	glycolysis II (from fructose 6-phosphate)
XFFB_05535	PWY-6703	preQ<sub>0</sub> biosynthesis
XFFB_05635	PWY-5958	acridone alkaloid biosynthesis
XFFB_05635	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
XFFB_05635	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
XFFB_05665	PWY-6854	ethylene biosynthesis III (microbes)
XFFB_05675	PWY-5316	nicotine biosynthesis
XFFB_05675	PWY-7342	superpathway of nicotine biosynthesis
XFFB_05680	PWY-5316	nicotine biosynthesis
XFFB_05680	PWY-7342	superpathway of nicotine biosynthesis
XFFB_05685	PWY-5316	nicotine biosynthesis
XFFB_05685	PWY-5381	pyridine nucleotide cycling (plants)
XFFB_05685	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
XFFB_05685	PWY-7342	superpathway of nicotine biosynthesis
XFFB_05735	PWY-6012	acyl carrier protein metabolism I
XFFB_05735	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
XFFB_05735	PWY-6289	petrobactin biosynthesis
XFFB_05745	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XFFB_05745	PWY-5723	Rubisco shunt
XFFB_05745	PWY-6891	thiazole biosynthesis II (Bacillus)
XFFB_05745	PWY-6892	thiazole biosynthesis I (E. coli)
XFFB_05745	PWY-6901	superpathway of glucose and xylose degradation
XFFB_05745	PWY-7560	methylerythritol phosphate pathway II
XFFB_05760	PWY-2582	brassinosteroid biosynthesis II
XFFB_05760	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
XFFB_05760	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
XFFB_05760	PWY-6948	sitosterol degradation to androstenedione
XFFB_05760	PWY-699	brassinosteroid biosynthesis I
XFFB_05760	PWY-7299	progesterone biosynthesis
XFFB_05785	PWY-2161	folate polyglutamylation
XFFB_05800	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
XFFB_05800	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
XFFB_05800	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
XFFB_05800	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
XFFB_05860	PWY-5381	pyridine nucleotide cycling (plants)
XFFB_05860	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
XFFB_05860	PWY-7761	XFFB_05860
XFFB_05885	PWY-4381	fatty acid biosynthesis initiation I
XFFB_05900	PWY-6123	inosine-5'-phosphate biosynthesis I
XFFB_05900	PWY-6124	inosine-5'-phosphate biosynthesis II
XFFB_05900	PWY-7234	inosine-5'-phosphate biosynthesis III
XFFB_05905	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
XFFB_05905	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
XFFB_05905	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
XFFB_05935	PWY-5663	tetrahydrobiopterin biosynthesis I
XFFB_05935	PWY-5664	tetrahydrobiopterin biosynthesis II
XFFB_05935	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
XFFB_05935	PWY-6703	preQ<sub>0</sub> biosynthesis
XFFB_05935	PWY-6983	tetrahydrobiopterin biosynthesis III
XFFB_05935	PWY-7442	drosopterin and aurodrosopterin biosynthesis
XFFB_05935	PWY-7852	XFFB_05935
XFFB_05970	PWY-6168	flavin biosynthesis III (fungi)
XFFB_05970	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
XFFB_05970	PWY-7991	XFFB_05970
XFFB_06005	PWY-5057	L-valine degradation II
XFFB_06005	PWY-5076	L-leucine degradation III
XFFB_06005	PWY-5078	L-isoleucine degradation II
XFFB_06005	PWY-5101	L-isoleucine biosynthesis II
XFFB_06005	PWY-5103	L-isoleucine biosynthesis III
XFFB_06005	PWY-5104	L-isoleucine biosynthesis IV
XFFB_06005	PWY-5108	L-isoleucine biosynthesis V
XFFB_06005	PWY-7767	XFFB_06005
XFFB_06045	PWY-7799	XFFB_06045
XFFB_06045	PWY-7800	XFFB_06045
XFFB_06080	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XFFB_06080	PWY-5723	Rubisco shunt
XFFB_06250	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
XFFB_06250	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
XFFB_06250	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
XFFB_06255	PWY-5022	4-aminobutanoate degradation V
XFFB_06255	PWY-6728	methylaspartate cycle
XFFB_06255	PWY-7126	ethylene biosynthesis IV
XFFB_06280	PWY-5663	tetrahydrobiopterin biosynthesis I
XFFB_06280	PWY-5664	tetrahydrobiopterin biosynthesis II
XFFB_06280	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
XFFB_06280	PWY-6703	preQ<sub>0</sub> biosynthesis
XFFB_06280	PWY-6983	tetrahydrobiopterin biosynthesis III
XFFB_06280	PWY-7442	drosopterin and aurodrosopterin biosynthesis
XFFB_06280	PWY-7852	XFFB_06280
XFFB_06285	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XFFB_06510	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
XFFB_06510	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
XFFB_06550	PWY-5386	methylglyoxal degradation I
XFFB_06570	PWY-7805	XFFB_06570
XFFB_06570	PWY-7807	XFFB_06570
XFFB_06600	PWY-5381	pyridine nucleotide cycling (plants)
XFFB_06600	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
XFFB_06600	PWY-7761	XFFB_06600
XFFB_06865	PWY-5392	reductive TCA cycle II
XFFB_06865	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
XFFB_06865	PWY-5690	TCA cycle II (plants and fungi)
XFFB_06865	PWY-5913	TCA cycle VI (obligate autotrophs)
XFFB_06865	PWY-6728	methylaspartate cycle
XFFB_06865	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XFFB_06865	PWY-7254	TCA cycle VII (acetate-producers)
XFFB_06865	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XFFB_06875	PWY-6123	inosine-5'-phosphate biosynthesis I
XFFB_06875	PWY-6124	inosine-5'-phosphate biosynthesis II
XFFB_06875	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XFFB_06875	PWY-7234	inosine-5'-phosphate biosynthesis III
XFFB_06885	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
XFFB_06890	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
XFFB_06900	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
XFFB_06900	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
XFFB_06935	PWY-6834	spermidine biosynthesis III
XFFB_07105	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
XFFB_07120	PWY-5278	sulfite oxidation III
XFFB_07120	PWY-5340	sulfate activation for sulfonation
XFFB_07120	PWY-6683	sulfate reduction III (assimilatory)
XFFB_07120	PWY-6932	selenate reduction
XFFB_07130	PWY-6683	sulfate reduction III (assimilatory)
XFFB_07180	PWY-5839	menaquinol-7 biosynthesis
XFFB_07180	PWY-5844	menaquinol-9 biosynthesis
XFFB_07180	PWY-5849	menaquinol-6 biosynthesis
XFFB_07180	PWY-5890	menaquinol-10 biosynthesis
XFFB_07180	PWY-5891	menaquinol-11 biosynthesis
XFFB_07180	PWY-5892	menaquinol-12 biosynthesis
XFFB_07180	PWY-5895	menaquinol-13 biosynthesis
XFFB_07210	PWY-2941	L-lysine biosynthesis II
XFFB_07210	PWY-5097	L-lysine biosynthesis VI
XFFB_07245	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
XFFB_07265	PWY-6749	CMP-legionaminate biosynthesis I
XFFB_07270	PWY-4381	fatty acid biosynthesis initiation I
XFFB_07270	PWY-5743	3-hydroxypropanoate cycle
XFFB_07270	PWY-5744	glyoxylate assimilation
XFFB_07270	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XFFB_07270	PWY-6722	candicidin biosynthesis
XFFB_07275	PWY-6906	chitin derivatives degradation
XFFB_07275	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
XFFB_07275	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
XFFB_07300	PWY-2722	trehalose degradation IV
XFFB_07300	PWY-2723	trehalose degradation V
XFFB_07300	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
XFFB_07300	PWY-5661	GDP-glucose biosynthesis
XFFB_07300	PWY-621	sucrose degradation III (sucrose invertase)
XFFB_07300	PWY-7238	sucrose biosynthesis II
XFFB_07300	PWY-7385	1,3-propanediol biosynthesis (engineered)
XFFB_07320	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
XFFB_07320	PWY-6148	tetrahydromethanopterin biosynthesis
XFFB_07320	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
XFFB_07320	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
XFFB_07320	PWY-7852	XFFB_07320
XFFB_07320	PWY-7853	XFFB_07320
XFFB_07365	PWY-7801	XFFB_07365
XFFB_07430	PWY-6840	homoglutathione biosynthesis
XFFB_07430	PWY-7255	ergothioneine biosynthesis I (bacteria)
XFFB_07490	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XFFB_07490	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XFFB_07490	PWY-7953	XFFB_07490
XFFB_07505	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
XFFB_07505	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
XFFB_07565	PWY-5386	methylglyoxal degradation I
XFFB_07595	PWY-3781	aerobic respiration I (cytochrome c)
XFFB_07595	PWY-4521	arsenite oxidation I (respiratory)
XFFB_07595	PWY-6692	Fe(II) oxidation
XFFB_07595	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XFFB_07595	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
XFFB_07680	PWY-2941	L-lysine biosynthesis II
XFFB_07680	PWY-2942	L-lysine biosynthesis III
XFFB_07680	PWY-5097	L-lysine biosynthesis VI
XFFB_07680	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XFFB_07680	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
XFFB_07680	PWY-6559	spermidine biosynthesis II
XFFB_07680	PWY-6562	norspermidine biosynthesis
XFFB_07680	PWY-7153	grixazone biosynthesis
XFFB_07680	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XFFB_07680	PWY-7977	XFFB_07680
XFFB_07685	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XFFB_07700	PWY-5669	phosphatidylethanolamine biosynthesis I
XFFB_07735	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XFFB_07735	PWY-6578	8-amino-7-oxononanoate biosynthesis III
XFFB_07735	PWY-7147	8-amino-7-oxononanoate biosynthesis II
XFFB_07740	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XFFB_07810	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
XFFB_07810	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
XFFB_07820	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XFFB_07825	PWY-6164	3-dehydroquinate biosynthesis I
XFFB_07830	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
XFFB_07830	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
XFFB_07830	PWY-7766	XFFB_07830
XFFB_07905	PWY-6700	queuosine biosynthesis
XFFB_07910	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XFFB_07910	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
XFFB_07910	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XFFB_07910	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XFFB_07915	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XFFB_07915	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XFFB_08010	PWY-7560	methylerythritol phosphate pathway II
XFFB_08015	PWY-7560	methylerythritol phosphate pathway II
XFFB_08025	PWY-1042	glycolysis IV (plant cytosol)
XFFB_08025	PWY-1622	formaldehyde assimilation I (serine pathway)
XFFB_08025	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XFFB_08025	PWY-5484	glycolysis II (from fructose 6-phosphate)
XFFB_08025	PWY-5723	Rubisco shunt
XFFB_08025	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XFFB_08025	PWY-6886	1-butanol autotrophic biosynthesis
XFFB_08025	PWY-6901	superpathway of glucose and xylose degradation
XFFB_08025	PWY-7003	glycerol degradation to butanol
XFFB_08025	PWY-7124	ethylene biosynthesis V (engineered)
XFFB_08025	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
XFFB_08030	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
XFFB_08030	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
XFFB_08035	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
XFFB_08035	PWY-7177	UTP and CTP dephosphorylation II
XFFB_08035	PWY-7185	UTP and CTP dephosphorylation I
XFFB_08095	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
XFFB_08095	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
XFFB_08100	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
XFFB_08100	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
XFFB_08130	PWY-5484	glycolysis II (from fructose 6-phosphate)
XFFB_08130	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XFFB_08300	PWY-5747	2-methylcitrate cycle II
XFFB_08380	PWY-1622	formaldehyde assimilation I (serine pathway)
XFFB_08380	PWY-5392	reductive TCA cycle II
XFFB_08380	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
XFFB_08380	PWY-5690	TCA cycle II (plants and fungi)
XFFB_08380	PWY-5913	TCA cycle VI (obligate autotrophs)
XFFB_08380	PWY-6728	methylaspartate cycle
XFFB_08380	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XFFB_08380	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XFFB_08380	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XFFB_08430	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
XFFB_08430	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XFFB_08430	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
XFFB_08430	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
XFFB_08430	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XFFB_08430	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XFFB_08430	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
XFFB_08430	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
XFFB_08435	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
XFFB_08435	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XFFB_08435	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
XFFB_08435	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
XFFB_08435	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XFFB_08435	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XFFB_08435	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
XFFB_08435	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
XFFB_08680	PWY-7980	XFFB_08680
XFFB_08690	PWY-7980	XFFB_08690
XFFB_08700	PWY-3461	L-tyrosine biosynthesis II
XFFB_08700	PWY-3462	L-phenylalanine biosynthesis II
XFFB_08700	PWY-6120	L-tyrosine biosynthesis III
XFFB_08700	PWY-6627	salinosporamide A biosynthesis
XFFB_08700	PWY-7626	bacilysin biosynthesis
XFFB_08705	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
XFFB_08775	PWY-2201	folate transformations I
XFFB_08775	PWY-3841	folate transformations II
XFFB_08780	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
XFFB_08780	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
XFFB_08780	PWY-6897	thiamin salvage II
XFFB_08780	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
XFFB_08780	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
XFFB_08780	PWY-7356	thiamin salvage IV (yeast)
XFFB_08780	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
XFFB_08800	PWY-2941	L-lysine biosynthesis II
XFFB_08800	PWY-2942	L-lysine biosynthesis III
XFFB_08800	PWY-5097	L-lysine biosynthesis VI
XFFB_08800	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
XFFB_08800	PWY-6559	spermidine biosynthesis II
XFFB_08800	PWY-6562	norspermidine biosynthesis
XFFB_08800	PWY-7153	grixazone biosynthesis
XFFB_08800	PWY-7977	XFFB_08800
XFFB_08830	PWY-7805	XFFB_08830
XFFB_08830	PWY-7807	XFFB_08830
XFFB_08850	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XFFB_08850	PWY-5686	UMP biosynthesis
XFFB_08850	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XFFB_08850	PWY-7790	XFFB_08850
XFFB_08850	PWY-7791	XFFB_08850
XFFB_08855	PWY-2941	L-lysine biosynthesis II
XFFB_08855	PWY-2942	L-lysine biosynthesis III
XFFB_08855	PWY-5097	L-lysine biosynthesis VI
XFFB_08880	PWY-5381	pyridine nucleotide cycling (plants)
XFFB_08885	PWY-7731	XFFB_08885
XFFB_08960	PWY-3781	aerobic respiration I (cytochrome c)
XFFB_08960	PWY-4302	aerobic respiration III (alternative oxidase pathway)
XFFB_08960	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
XFFB_08960	PWY-5690	TCA cycle II (plants and fungi)
XFFB_08960	PWY-6728	methylaspartate cycle
XFFB_08960	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XFFB_08960	PWY-7254	TCA cycle VII (acetate-producers)
XFFB_08960	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XFFB_08965	PWY-3781	aerobic respiration I (cytochrome c)
XFFB_08965	PWY-4302	aerobic respiration III (alternative oxidase pathway)
XFFB_08965	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
XFFB_08965	PWY-5690	TCA cycle II (plants and fungi)
XFFB_08965	PWY-6728	methylaspartate cycle
XFFB_08965	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XFFB_08965	PWY-7254	TCA cycle VII (acetate-producers)
XFFB_08965	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XFFB_08995	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
XFFB_09000	PWY-2722	trehalose degradation IV
XFFB_09000	PWY-2723	trehalose degradation V
XFFB_09000	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
XFFB_09000	PWY-5661	GDP-glucose biosynthesis
XFFB_09000	PWY-621	sucrose degradation III (sucrose invertase)
XFFB_09000	PWY-7238	sucrose biosynthesis II
XFFB_09000	PWY-7385	1,3-propanediol biosynthesis (engineered)
XFFB_09005	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
XFFB_09005	PWY-6855	chitin degradation I (archaea)
XFFB_09005	PWY-6906	chitin derivatives degradation
XFFB_09010	PWY-5101	L-isoleucine biosynthesis II
XFFB_09010	PWY-5103	L-isoleucine biosynthesis III
XFFB_09010	PWY-5104	L-isoleucine biosynthesis IV
XFFB_09010	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XFFB_09015	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XFFB_09015	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
XFFB_09015	PWY-7242	D-fructuronate degradation
XFFB_09015	PWY-7310	D-glucosaminate degradation
XFFB_09015	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
XFFB_09075	PWY-5667	CDP-diacylglycerol biosynthesis I
XFFB_09075	PWY-5981	CDP-diacylglycerol biosynthesis III
XFFB_09075	PWY-7817	XFFB_09075
XFFB_09080	PWY-7560	methylerythritol phosphate pathway II
XFFB_09100	PWY-5971	palmitate biosynthesis II (bacteria and plants)
XFFB_09100	PWY-5973	<i>cis</i>-vaccenate biosynthesis
XFFB_09100	PWY-5989	stearate biosynthesis II (bacteria and plants)
XFFB_09100	PWY-5994	palmitate biosynthesis I (animals and fungi)
XFFB_09100	PWY-6113	superpathway of mycolate biosynthesis
XFFB_09100	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
XFFB_09100	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XFFB_09100	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XFFB_09100	PWY-7663	gondoate biosynthesis (anaerobic)
XFFB_09100	PWY-7664	oleate biosynthesis IV (anaerobic)
XFFB_09100	PWY-7858	XFFB_09100
XFFB_09100	PWYG-321	mycolate biosynthesis
XFFB_09125	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
XFFB_09140	PWY-5667	CDP-diacylglycerol biosynthesis I
XFFB_09140	PWY-6453	stigma estolide biosynthesis
XFFB_09140	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
XFFB_09140	PWY-7587	oleate biosynthesis III (cyanobacteria)
XFFB_09175	PWY-7802	XFFB_09175
XFFB_09240	PWY-3341	L-proline biosynthesis III
XFFB_09240	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
XFFB_09245	PWY-3341	L-proline biosynthesis III
XFFB_09245	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
XFFB_09250	PWY-4983	L-citrulline-nitric oxide cycle
XFFB_09250	PWY-4984	urea cycle
XFFB_09250	PWY-5	canavanine biosynthesis
XFFB_09250	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XFFB_09250	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XFFB_09260	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XFFB_09260	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XFFB_09270	PWY-4983	L-citrulline-nitric oxide cycle
XFFB_09270	PWY-4984	urea cycle
XFFB_09270	PWY-5	canavanine biosynthesis
XFFB_09270	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XFFB_09270	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XFFB_09275	PWY-5686	UMP biosynthesis
XFFB_09275	PWY-7790	XFFB_09275
XFFB_09275	PWY-7791	XFFB_09275
XFFB_09315	PWY-5686	UMP biosynthesis
XFFB_09315	PWY-7790	XFFB_09315
XFFB_09315	PWY-7791	XFFB_09315
XFFB_09330	PWY-4041	&gamma;-glutamyl cycle
XFFB_09330	PWY-4061	glutathione-mediated detoxification I
XFFB_09330	PWY-5826	hypoglycin biosynthesis
XFFB_09330	PWY-6842	glutathione-mediated detoxification II
XFFB_09330	PWY-7112	4-hydroxy-2-nonenal detoxification
XFFB_09330	PWY-7559	glutathione degradation (DUG pathway - yeast)
XFFB_09345	PWY-7851	XFFB_09345
XFFB_09360	PWY-1281	sulfoacetaldehyde degradation I
XFFB_09360	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
XFFB_09360	PWY-5482	pyruvate fermentation to acetate II
XFFB_09360	PWY-5485	pyruvate fermentation to acetate IV
XFFB_09360	PWY-5497	purine nucleobases degradation II (anaerobic)
XFFB_09360	PWY-6637	sulfolactate degradation II
XFFB_09360	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XFFB_09780	PWY-2941	L-lysine biosynthesis II
XFFB_09780	PWY-2942	L-lysine biosynthesis III
XFFB_09780	PWY-5097	L-lysine biosynthesis VI
XFFB_09820	PWY-6167	flavin biosynthesis II (archaea)
XFFB_09820	PWY-6168	flavin biosynthesis III (fungi)
XFFB_09825	PWY-6167	flavin biosynthesis II (archaea)
XFFB_09825	PWY-6168	flavin biosynthesis III (fungi)
XFFB_09825	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
XFFB_09825	PWY-7991	XFFB_09825
XFFB_09830	PWY-6167	flavin biosynthesis II (archaea)
XFFB_09830	PWY-6168	flavin biosynthesis III (fungi)
XFFB_09830	PWY-7980	XFFB_09830
XFFB_09835	PWY-7991	XFFB_09835
XFFB_09850	PWY-1622	formaldehyde assimilation I (serine pathway)
XFFB_09850	PWY-181	photorespiration
XFFB_09850	PWY-2161	folate polyglutamylation
XFFB_09850	PWY-2201	folate transformations I
XFFB_09850	PWY-3661	glycine betaine degradation I
XFFB_09850	PWY-3661-1	glycine betaine degradation II (mammalian)
XFFB_09850	PWY-3841	folate transformations II
XFFB_09850	PWY-5497	purine nucleobases degradation II (anaerobic)
XFFB_09860	PWY-7254	TCA cycle VII (acetate-producers)
XFFB_10010	PWY-3781	aerobic respiration I (cytochrome c)
XFFB_10010	PWY-6692	Fe(II) oxidation
XFFB_10010	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
XFFB_10010	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XFFB_10140	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XFFB_10140	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
XFFB_10140	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XFFB_10140	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XFFB_10160	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
XFFB_10160	PWY-5743	3-hydroxypropanoate cycle
XFFB_10160	PWY-5744	glyoxylate assimilation
XFFB_10160	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XFFB_10160	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XFFB_10160	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XFFB_10160	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XFFB_10200	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
XFFB_10200	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
XFFB_10215	PWY-801	L-homocysteine and L-cysteine interconversion
XFFB_10230	PWY-5381	pyridine nucleotide cycling (plants)
XFFB_10230	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
XFFB_10230	PWY-6596	adenosine nucleotides degradation I
XFFB_10230	PWY-6606	guanosine nucleotides degradation II
XFFB_10230	PWY-6607	guanosine nucleotides degradation I
XFFB_10230	PWY-6608	guanosine nucleotides degradation III
XFFB_10230	PWY-7185	UTP and CTP dephosphorylation I
XFFB_10230	PWY-7821	XFFB_10230
XFFB_10260	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XFFB_10310	PWY-6807	xyloglucan degradation II (exoglucanase)
XFFB_10350	PWY-6936	seleno-amino acid biosynthesis
XFFB_10375	PWY-1042	glycolysis IV (plant cytosol)
XFFB_10375	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XFFB_10375	PWY-5484	glycolysis II (from fructose 6-phosphate)
XFFB_10375	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XFFB_10375	PWY-7385	1,3-propanediol biosynthesis (engineered)
XFFB_10380	PWY-1042	glycolysis IV (plant cytosol)
XFFB_10380	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XFFB_10380	PWY-5484	glycolysis II (from fructose 6-phosphate)
XFFB_10380	PWY-5723	Rubisco shunt
XFFB_10380	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XFFB_10380	PWY-6886	1-butanol autotrophic biosynthesis
XFFB_10380	PWY-6901	superpathway of glucose and xylose degradation
XFFB_10380	PWY-7003	glycerol degradation to butanol
XFFB_10380	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
XFFB_10380	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XFFB_10385	PWY-1042	glycolysis IV (plant cytosol)
XFFB_10385	PWY-5484	glycolysis II (from fructose 6-phosphate)
XFFB_10385	PWY-6886	1-butanol autotrophic biosynthesis
XFFB_10385	PWY-6901	superpathway of glucose and xylose degradation
XFFB_10385	PWY-7003	glycerol degradation to butanol
XFFB_10390	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XFFB_10465	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XFFB_10465	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XFFB_10465	PWY-7953	XFFB_10465
XFFB_10470	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XFFB_10470	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XFFB_10470	PWY-7953	XFFB_10470
XFFB_10475	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XFFB_10475	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
XFFB_10475	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XFFB_10475	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XFFB_10480	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XFFB_10480	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
XFFB_10480	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XFFB_10480	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XFFB_10485	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XFFB_10485	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XFFB_10485	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XFFB_10490	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XFFB_10490	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XFFB_10490	PWY-7953	XFFB_10490
XFFB_10500	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XFFB_10500	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XFFB_10535	PWY-6891	thiazole biosynthesis II (Bacillus)
XFFB_10535	PWY-6892	thiazole biosynthesis I (E. coli)
XFFB_11065	PWY-7851	XFFB_11065
XFFB_11115	PWY-5392	reductive TCA cycle II
XFFB_11115	PWY-5537	pyruvate fermentation to acetate V
XFFB_11115	PWY-5538	pyruvate fermentation to acetate VI
XFFB_11115	PWY-5690	TCA cycle II (plants and fungi)
XFFB_11115	PWY-5913	TCA cycle VI (obligate autotrophs)
XFFB_11115	PWY-6728	methylaspartate cycle
XFFB_11115	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XFFB_11115	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XFFB_11120	PWY-5392	reductive TCA cycle II
XFFB_11120	PWY-5537	pyruvate fermentation to acetate V
XFFB_11120	PWY-5538	pyruvate fermentation to acetate VI
XFFB_11120	PWY-5690	TCA cycle II (plants and fungi)
XFFB_11120	PWY-5913	TCA cycle VI (obligate autotrophs)
XFFB_11120	PWY-6728	methylaspartate cycle
XFFB_11120	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XFFB_11120	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XFFB_11145	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
XFFB_11145	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
XFFB_11225	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XFFB_11225	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XFFB_11225	PWY-7953	XFFB_11225
XFFB_11360	PWY-7158	L-phenylalanine degradation V
XFFB_11395	PWY-6854	ethylene biosynthesis III (microbes)
XFFB_11525	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
XFFB_11545	PWY-7560	methylerythritol phosphate pathway II
XFFB_11560	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XFFB_11615	PWY-6123	inosine-5'-phosphate biosynthesis I
XFFB_11615	PWY-7234	inosine-5'-phosphate biosynthesis III
XFFB_11710	PWY-7980	XFFB_11710
XFFB_11715	PWY-5913	TCA cycle VI (obligate autotrophs)
XFFB_11715	PWY-6549	L-glutamine biosynthesis III
XFFB_11715	PWY-6728	methylaspartate cycle
XFFB_11715	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XFFB_11715	PWY-7124	ethylene biosynthesis V (engineered)
XFFB_11715	PWY-7254	TCA cycle VII (acetate-producers)
XFFB_11715	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
XFFB_11755	PWY-3341	L-proline biosynthesis III
XFFB_11755	PWY-4981	L-proline biosynthesis II (from arginine)
XFFB_11755	PWY-6344	L-ornithine degradation II (Stickland reaction)
