XFFB_00005 PF00308 Bacterial dnaA protein XFFB_00005 PF08299 Bacterial dnaA protein helix-turn-helix XFFB_00005 PF11638 DnaA N-terminal domain XFFB_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain XFFB_00010 PF02767 DNA polymerase III beta subunit, central domain XFFB_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain XFFB_00015 PF02463 RecF/RecN/SMC N terminal domain XFFB_00025 PF00204 DNA gyrase B XFFB_00025 PF00986 DNA gyrase B subunit, carboxyl terminus XFFB_00025 PF01751 Toprim domain XFFB_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFFB_00035 PF01435 Peptidase family M48 XFFB_00040 PF13181 Tetratricopeptide repeat XFFB_00040 PF13432 Tetratricopeptide repeat XFFB_00045 PF03544 Gram-negative bacterial TonB protein C-terminal XFFB_00050 PF01618 XFFB_00050 XFFB_00055 PF02472 Biopolymer transport protein ExbD/TolR XFFB_00060 PF02472 Biopolymer transport protein ExbD/TolR XFFB_00065 PF00326 Prolyl oligopeptidase family XFFB_00065 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XFFB_00075 PF01218 Coproporphyrinogen III oxidase XFFB_00095 PF00793 DAHP synthetase I family XFFB_00110 PF12019 Type II transport protein GspH XFFB_00115 PF07963 Prokaryotic N-terminal methylation motif XFFB_00120 PF16074 XFFB_00120 XFFB_00125 PF13681 XFFB_00125 XFFB_00125 PF14341 XFFB_00125 XFFB_00130 PF05567 Neisseria PilC beta-propeller domain XFFB_00135 PF07963 Prokaryotic N-terminal methylation motif XFFB_00135 PF16732 XFFB_00135 XFFB_00140 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family XFFB_00145 PF00155 Aminotransferase class I and II XFFB_00160 PF01741 Large-conductance mechanosensitive channel, MscL XFFB_00170 PF07399 XFFB_00170 XFFB_00180 PF13302 Acetyltransferase (GNAT) domain XFFB_00185 PF00270 DEAD/DEAH box helicase XFFB_00185 PF00271 Helicase conserved C-terminal domain XFFB_00185 PF02559 CarD-like/TRCF domain XFFB_00185 PF03461 TRCF domain XFFB_00195 PF01220 Dehydroquinase class II XFFB_00200 PF00364 Biotin-requiring enzyme XFFB_00205 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain XFFB_00205 PF02785 Biotin carboxylase C-terminal domain XFFB_00205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XFFB_00210 PF00580 UvrD/REP helicase N-terminal domain XFFB_00210 PF13361 UvrD-like helicase C-terminal domain XFFB_00220 PF00042 Globin XFFB_00220 PF00175 Oxidoreductase NAD-binding domain XFFB_00220 PF00970 Oxidoreductase FAD-binding domain XFFB_00235 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ XFFB_00240 PF02195 ParB-like nuclease domain XFFB_00240 PF08535 KorB domain XFFB_00245 PF00156 Phosphoribosyl transferase domain XFFB_00250 PF04055 Radical SAM superfamily XFFB_00250 PF06968 Biotin and Thiamin Synthesis associated domain XFFB_00255 PF01734 Patatin-like phospholipase XFFB_00295 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XFFB_00295 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XFFB_00300 PF01578 XFFB_00300 XFFB_00305 PF00448 SRP54-type protein, GTPase domain XFFB_00305 PF02881 SRP54-type protein, helical bundle domain XFFB_00305 PF02978 Signal peptide binding domain XFFB_00315 PF01063 Aminotransferase class IV XFFB_00320 PF00419 Fimbrial protein XFFB_00330 PF00419 Fimbrial protein XFFB_00335 PF00577 Outer membrane usher protein XFFB_00335 PF13953 PapC C-terminal domain XFFB_00335 PF13954 PapC N-terminal domain XFFB_00340 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain XFFB_00340 PF02753 Pili assembly chaperone PapD, C-terminal domain XFFB_00345 PF16970 XFFB_00345 XFFB_00350 PF02464 Competence-damaged protein XFFB_00355 PF00083 Sugar (and other) transporter XFFB_00360 PF01926 50S ribosome-binding GTPase XFFB_00360 PF13167 XFFB_00360 XFFB_00360 PF16360 XFFB_00360 XFFB_00365 PF17209 XFFB_00365 XFFB_00370 PF01715 IPP transferase XFFB_00375 PF00809 Pterin binding enzyme XFFB_00390 PF01728 FtsJ-like methyltransferase XFFB_00395 PF01985 CRS1 / YhbY (CRM) domain XFFB_00400 PF04430 Protein of unknown function (DUF498/DUF598) XFFB_00405 PF00920 Dehydratase family XFFB_00415 PF10276 Zinc-finger domain XFFB_00420 PF00534 Glycosyl transferases group 1 XFFB_00420 PF13439 Glycosyltransferase Family 4 XFFB_00425 PF04932 XFFB_00425 XFFB_00430 PF03279 XFFB_00430 XFFB_00435 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) XFFB_00440 PF00754 F5/8 type C domain XFFB_00440 PF01120 Alpha-L-fucosidase XFFB_00445 PF00886 Ribosomal protein S16 XFFB_00450 PF01782 RimM N-terminal domain XFFB_00450 PF05239 PRC-barrel domain XFFB_00455 PF01746 tRNA (Guanine-1)-methyltransferase XFFB_00460 PF01245 Ribosomal protein L19 XFFB_00465 PF00557 Metallopeptidase family M24 XFFB_00470 PF00132 Bacterial transferase hexapeptide (six repeats) XFFB_00470 PF14602 Hexapeptide repeat of succinyl-transferase XFFB_00470 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal XFFB_00475 PF03960 ArsC family XFFB_00480 PF01546 Peptidase family M20/M25/M40 XFFB_00480 PF07687 Peptidase dimerisation domain XFFB_00485 PF00733 Asparagine synthase XFFB_00485 PF13537 Glutamine amidotransferase domain XFFB_00490 PF13229 Right handed beta helix region XFFB_00495 PF03060 Nitronate monooxygenase XFFB_00500 PF00717 Peptidase S24-like XFFB_00500 PF01726 LexA DNA binding domain XFFB_00505 PF00154 recA bacterial DNA recombination protein XFFB_00515 PF02599 Global regulator protein family XFFB_00525 PF01432 Peptidase family M3 XFFB_00530 PF00291 Pyridoxal-phosphate dependent enzyme XFFB_00540 PF00394 Multicopper oxidase XFFB_00540 PF07731 Multicopper oxidase XFFB_00540 PF07732 Multicopper oxidase XFFB_00545 PF05275 XFFB_00545 XFFB_00550 PF00133 tRNA synthetases class I (I, L, M and V) XFFB_00550 PF08264 Anticodon-binding domain of tRNA XFFB_00550 PF10458 Valyl tRNA synthetase tRNA binding arm XFFB_00560 PF04364 DNA polymerase III chi subunit, HolC XFFB_00570 PF00883 Cytosol aminopeptidase family, catalytic domain XFFB_00570 PF02789 Cytosol aminopeptidase family, N-terminal domain XFFB_00575 PF03739 XFFB_00575 XFFB_00580 PF03739 XFFB_00580 XFFB_00590 PF01380 SIS domain XFFB_00590 PF13522 Glutamine amidotransferase domain XFFB_00595 PF01757 XFFB_00595 XFFB_00600 PF01564 Spermine/spermidine synthase XFFB_00600 PF17284 XFFB_00600 XFFB_00605 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XFFB_00610 PF00106 short chain dehydrogenase XFFB_00615 PF05036 Sporulation related domain XFFB_00620 PF00750 tRNA synthetases class I (R) XFFB_00620 PF03485 Arginyl tRNA synthetase N terminal domain XFFB_00620 PF05746 DALR anticodon binding domain XFFB_00625 PF04002 RadC-like JAB domain XFFB_00630 PF02441 Flavoprotein XFFB_00630 PF04127 DNA / pantothenate metabolism flavoprotein XFFB_00635 PF00692 dUTPase XFFB_00640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XFFB_00640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XFFB_00640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XFFB_00640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XFFB_00650 PF00156 Phosphoribosyl transferase domain XFFB_00660 PF11692 XFFB_00660 XFFB_00665 PF00112 Papain family cysteine protease XFFB_00680 PF10088 XFFB_00680 XFFB_00685 PF03372 Endonuclease/Exonuclease/phosphatase family XFFB_00690 PF13000 XFFB_00690 XFFB_00700 PF01551 Peptidase family M23 XFFB_00700 PF04225 Opacity-associated protein A LysM-like domain XFFB_00705 PF00579 tRNA synthetases class I (W and Y) XFFB_00735 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XFFB_00735 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XFFB_00740 PF01578 XFFB_00740 XFFB_00745 PF05960 Bacterial protein of unknown function (DUF885) XFFB_00750 PF13561 Enoyl-(Acyl carrier protein) reductase XFFB_00755 PF00009 Elongation factor Tu GTP binding domain XFFB_00755 PF16658 XFFB_00755 XFFB_00760 PF03006 XFFB_00760 XFFB_00765 PF00535 Glycosyl transferase family 2 XFFB_00770 PF01026 TatD related DNase XFFB_00775 PF05433 XFFB_00775 XFFB_00785 PF01597 Glycine cleavage H-protein XFFB_00790 PF01571 Aminomethyltransferase folate-binding domain XFFB_00790 PF08669 Glycine cleavage T-protein C-terminal barrel domain XFFB_00795 PF01957 NfeD-like C-terminal, partner-binding XFFB_00800 PF01145 SPFH domain / Band 7 family XFFB_00800 PF16200 XFFB_00800 XFFB_00805 PF03819 MazG nucleotide pyrophosphohydrolase domain XFFB_00810 PF00459 Inositol monophosphatase family XFFB_00815 PF00293 NUDIX domain XFFB_00820 PF00202 Aminotransferase class-III XFFB_00825 PF04452 RNA methyltransferase XFFB_00830 PF00270 DEAD/DEAH box helicase XFFB_00830 PF00271 Helicase conserved C-terminal domain XFFB_00835 PF01242 6-pyruvoyl tetrahydropterin synthase XFFB_00845 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) XFFB_00850 PF01553 Acyltransferase XFFB_00855 PF04367 XFFB_00855 XFFB_00860 PF13489 Methyltransferase domain XFFB_00865 PF03653 XFFB_00865 XFFB_00870 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit XFFB_00875 PF01336 OB-fold nucleic acid binding domain XFFB_00875 PF02811 PHP domain XFFB_00875 PF07733 Bacterial DNA polymerase III alpha subunit XFFB_00875 PF14579 Helix-hairpin-helix motif XFFB_00880 PF01259 SAICAR synthetase XFFB_00885 PF00226 DnaJ domain XFFB_00890 PF00834 Ribulose-phosphate 3 epimerase family XFFB_00895 PF00425 chorismate binding enzyme XFFB_00895 PF04715 Anthranilate synthase component I, N terminal region XFFB_00900 PF00117 Glutamine amidotransferase class-I XFFB_00905 PF00591 Glycosyl transferase family, a/b domain XFFB_00905 PF02885 Glycosyl transferase family, helical bundle domain XFFB_00910 PF00218 Indole-3-glycerol phosphate synthase XFFB_00915 PF12710 haloacid dehalogenase-like hydrolase XFFB_00920 PF01047 MarR family XFFB_00930 PF00557 Metallopeptidase family M24 XFFB_00930 PF01321 Creatinase/Prolidase N-terminal domain XFFB_00935 PF05960 Bacterial protein of unknown function (DUF885) XFFB_00940 PF05960 Bacterial protein of unknown function (DUF885) XFFB_00945 PF01702 Queuine tRNA-ribosyltransferase XFFB_00955 PF02355 Protein export membrane protein XFFB_00955 PF07549 SecD/SecF GG Motif XFFB_00955 PF13721 SecD export protein N-terminal TM region XFFB_00970 PF01743 Poly A polymerase head domain XFFB_00970 PF12626 Polymerase A arginine-rich C-terminus XFFB_00970 PF12627 Probable RNA and SrmB- binding site of polymerase A XFFB_00975 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XFFB_00980 PF02548 Ketopantoate hydroxymethyltransferase XFFB_00985 PF02569 Pantoate-beta-alanine ligase XFFB_00990 PF02261 Aspartate decarboxylase XFFB_01010 PF02576 Uncharacterised BCR, YhbC family COG0779 XFFB_01010 PF17384 XFFB_01010 XFFB_01015 PF00575 S1 RNA binding domain XFFB_01015 PF08529 NusA N-terminal domain XFFB_01015 PF13184 NusA-like KH domain XFFB_01015 PF14520 Helix-hairpin-helix domain XFFB_01020 PF00009 Elongation factor Tu GTP binding domain XFFB_01020 PF04760 Translation initiation factor IF-2, N-terminal region XFFB_01020 PF08364 XFFB_01020 XFFB_01020 PF11987 Translation-initiation factor 2 XFFB_01025 PF02033 Ribosome-binding factor A XFFB_01035 PF00312 Ribosomal protein S15 XFFB_01040 PF00013 KH domain XFFB_01040 PF00575 S1 RNA binding domain XFFB_01040 PF01138 3' exoribonuclease family, domain 1 XFFB_01040 PF03725 3' exoribonuclease family, domain 2 XFFB_01040 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain XFFB_01045 PF01638 HxlR-like helix-turn-helix XFFB_01050 PF05368 NmrA-like family XFFB_01065 PF00873 AcrB/AcrD/AcrF family XFFB_01070 PF16576 XFFB_01070 XFFB_01085 PF00892 EamA-like transporter family XFFB_01090 PF00270 DEAD/DEAH box helicase XFFB_01090 PF00271 Helicase conserved C-terminal domain XFFB_01090 PF03880 DbpA RNA binding domain XFFB_01095 PF00766 Electron transfer flavoprotein FAD-binding domain XFFB_01095 PF01012 Electron transfer flavoprotein domain XFFB_01100 PF01012 Electron transfer flavoprotein domain XFFB_01110 PF00483 Nucleotidyl transferase XFFB_01115 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase XFFB_01120 PF04321 RmlD substrate binding domain XFFB_01125 PF00483 Nucleotidyl transferase XFFB_01125 PF01050 Mannose-6-phosphate isomerase XFFB_01130 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XFFB_01130 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XFFB_01130 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XFFB_01130 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XFFB_01165 PF06779 XFFB_01165 XFFB_01170 PF07273 Protein of unknown function (DUF1439) XFFB_01175 PF00365 Phosphofructokinase XFFB_01180 PF00406 Adenylate kinase XFFB_01185 PF01225 Mur ligase family, catalytic domain XFFB_01185 PF02875 Mur ligase family, glutamate ligase domain XFFB_01185 PF08245 Mur ligase middle domain XFFB_01190 PF01569 PAP2 superfamily XFFB_01190 PF09335 XFFB_01190 XFFB_01190 PF14067 XFFB_01190 XFFB_01195 PF01636 Phosphotransferase enzyme family XFFB_01200 PF00883 Cytosol aminopeptidase family, catalytic domain XFFB_01205 PF01594 XFFB_01205 XFFB_012100 PF00239 Resolvase, N terminal domain XFFB_012100 PF02796 Helix-turn-helix domain of resolvase XFFB_012110 PF03230 Antirestriction protein XFFB_012125 PF01131 DNA topoisomerase XFFB_012125 PF01751 Toprim domain XFFB_012130 PF10502 Signal peptidase, peptidase S26 XFFB_012135 PF02534 Type IV secretory system Conjugative DNA transfer XFFB_012140 PF03432 XFFB_012140 XFFB_012150 PF17273 XFFB_012150 XFFB_012160 PF11657 XFFB_012160 XFFB_012175 PF02195 ParB-like nuclease domain XFFB_012175 PF06613 KorB C-terminal beta-barrel domain XFFB_012175 PF08535 KorB domain XFFB_012180 PF13614 AAA domain XFFB_012185 PF16509 XFFB_012185 XFFB_012190 PF17394 XFFB_012190 XFFB_012195 PF04796 XFFB_012195 XFFB_012205 PF00436 Single-strand binding protein family XFFB_012210 PF01381 Helix-turn-helix XFFB_012215 PF00437 Type II/IV secretion system protein XFFB_012220 PF04956 XFFB_012220 XFFB_012225 PF05101 XFFB_012225 XFFB_012230 PF03135 XFFB_012230 XFFB_012235 PF04335 VirB8 protein XFFB_012240 PF03524 Conjugal transfer protein XFFB_012245 PF07283 XFFB_012245 XFFB_01225 PF13180 PDZ domain XFFB_01225 PF13365 Trypsin-like peptidase domain XFFB_012250 PF03743 Bacterial conjugation TrbI-like protein XFFB_012265 PF04610 XFFB_012265 XFFB_012275 PF13744 Helix-turn-helix domain XFFB_012280 PF05973 XFFB_012280 XFFB_012290 PF12697 Alpha/beta hydrolase family XFFB_01230 PF01370 NAD dependent epimerase/dehydratase family XFFB_01230 PF08338 Domain of unknown function (DUF1731) XFFB_012300 PF02452 PemK-like protein XFFB_012305 PF13828 XFFB_012305 XFFB_012310 PF13673 Acetyltransferase (GNAT) domain XFFB_012315 PF08681 Protein of unknown function (DUF1778) XFFB_012320 PF16762 XFFB_012320 XFFB_012325 PF13470 XFFB_012325 XFFB_01240 PF00330 Aconitase family (aconitate hydratase) XFFB_01240 PF00694 Aconitase C-terminal domain XFFB_01245 PF01850 PIN domain XFFB_01250 PF00330 Aconitase family (aconitate hydratase) XFFB_01250 PF06434 Aconitate hydratase 2 N-terminus XFFB_01250 PF11791 Aconitate B N-terminal domain XFFB_01270 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XFFB_01270 PF04851 Type III restriction enzyme, res subunit XFFB_01280 PF01420 Type I restriction modification DNA specificity domain XFFB_01290 PF13560 Helix-turn-helix domain XFFB_01310 PF00121 Triosephosphate isomerase XFFB_01315 PF03840 Preprotein translocase SecG subunit XFFB_01325 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 XFFB_01330 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit XFFB_01335 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit XFFB_01340 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit XFFB_01345 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin XFFB_01355 PF00384 Molybdopterin oxidoreductase XFFB_01355 PF01568 Molydopterin dinucleotide binding domain XFFB_01355 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XFFB_01355 PF13510 2Fe-2S iron-sulfur cluster binding domain XFFB_01360 PF00146 NADH dehydrogenase XFFB_01365 PF12838 4Fe-4S dicluster domain XFFB_01370 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 XFFB_01375 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XFFB_01380 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains XFFB_01380 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XFFB_01385 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains XFFB_01390 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains XFFB_01395 PF13561 Enoyl-(Acyl carrier protein) reductase XFFB_01400 PF03600 Citrate transporter XFFB_01410 PF00072 Response regulator receiver domain XFFB_01410 PF00486 Transcriptional regulatory protein, C terminal XFFB_01420 PF13531 Bacterial extracellular solute-binding protein XFFB_01430 PF01385 XFFB_01430 XFFB_01430 PF07282 XFFB_01430 XFFB_01455 PF07120 XFFB_01455 XFFB_01460 PF02590 Predicted SPOUT methyltransferase XFFB_01470 PF02600 Disulfide bond formation protein DsbB XFFB_01480 PF00691 OmpA family XFFB_01480 PF13505 Outer membrane protein beta-barrel domain XFFB_01490 PF01565 FAD binding domain XFFB_01490 PF02913 FAD linked oxidases, C-terminal domain XFFB_01495 PF02824 TGS domain XFFB_01495 PF04607 Region found in RelA / SpoT proteins XFFB_01495 PF13291 ACT domain XFFB_01495 PF13328 HD domain XFFB_01500 PF01042 Endoribonuclease L-PSP XFFB_01505 PF00270 DEAD/DEAH box helicase XFFB_01505 PF00271 Helicase conserved C-terminal domain XFFB_01505 PF17191 XFFB_01505 XFFB_01510 PF00067 Cytochrome P450 XFFB_01515 PF03583 Secretory lipase XFFB_01520 PF03583 Secretory lipase XFFB_01535 PF00691 OmpA family XFFB_01535 PF13488 XFFB_01535 XFFB_01540 PF00294 pfkB family carbohydrate kinase XFFB_01545 PF00248 Aldo/keto reductase family XFFB_01550 PF00905 Penicillin binding protein transpeptidase domain XFFB_01550 PF00912 Transglycosylase XFFB_01550 PF17092 XFFB_01550 XFFB_01555 PF11104 Type IV pilus assembly protein PilM; XFFB_01560 PF05137 XFFB_01560 XFFB_01565 PF04350 Pilus assembly protein, PilO XFFB_01570 PF04351 Pilus assembly protein, PilP XFFB_01580 PF01569 PAP2 superfamily XFFB_01585 PF00884 Sulfatase XFFB_01585 PF08019 XFFB_01585 XFFB_01590 PF00067 Cytochrome P450 XFFB_01595 PF02581 Thiamine monophosphate synthase/TENI XFFB_01600 PF00301 Rubredoxin XFFB_01610 PF17067 XFFB_01610 XFFB_01615 PF03203 XFFB_01615 XFFB_01620 PF00593 TonB dependent receptor XFFB_01620 PF07715 TonB-dependent Receptor Plug Domain XFFB_01635 PF00072 Response regulator receiver domain XFFB_01635 PF00486 Transcriptional regulatory protein, C terminal XFFB_01640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFFB_01645 PF00438 S-adenosylmethionine synthetase, N-terminal domain XFFB_01645 PF02772 S-adenosylmethionine synthetase, central domain XFFB_01645 PF02773 S-adenosylmethionine synthetase, C-terminal domain XFFB_01660 PF00293 NUDIX domain XFFB_01665 PF04324 BFD-like [2Fe-2S] binding domain XFFB_01670 PF00210 Ferritin-like domain XFFB_01695 PF00072 Response regulator receiver domain XFFB_01695 PF00563 EAL domain XFFB_01695 PF00990 GGDEF domain XFFB_01705 PF04519 XFFB_01705 XFFB_01710 PF01521 Iron-sulphur cluster biosynthesis XFFB_01715 PF03741 XFFB_01715 XFFB_01720 PF10672 S-adenosylmethionine-dependent methyltransferase XFFB_01725 PF13520 Amino acid permease XFFB_01730 PF00528 Binding-protein-dependent transport system inner membrane component XFFB_01735 PF00005 ABC transporter XFFB_01735 PF09821 XFFB_01735 XFFB_01740 PF02646 XFFB_01740 XFFB_01750 PF04333 XFFB_01750 XFFB_01755 PF13466 STAS domain XFFB_01760 PF05494 Toluene tolerance, Ttg2 XFFB_01765 PF02470 XFFB_01765 XFFB_01770 PF02405 XFFB_01770 XFFB_01775 PF00005 ABC transporter XFFB_01805 PF01807 CHC2 zinc finger XFFB_01805 PF08275 DNA primase catalytic core, N-terminal domain XFFB_01805 PF08278 DNA primase DnaG DnaB-binding XFFB_01805 PF10410 DnaB-helicase binding domain of primase XFFB_01805 PF13662 Toprim domain XFFB_01810 PF03631 XFFB_01810 XFFB_01815 PF09424 Yqey-like protein XFFB_01820 PF01165 Ribosomal protein S21 XFFB_01825 PF00814 Glycoprotease family XFFB_01830 PF02152 Dihydroneopterin aldolase XFFB_01835 PF00924 Mechanosensitive ion channel XFFB_01840 PF00933 Glycosyl hydrolase family 3 N terminal domain XFFB_01840 PF01915 Glycosyl hydrolase family 3 C-terminal domain XFFB_01840 PF14310 Fibronectin type III-like domain XFFB_01845 PF00583 Acetyltransferase (GNAT) family XFFB_01855 PF01066 CDP-alcohol phosphatidyltransferase XFFB_01860 PF13511 XFFB_01860 XFFB_01865 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XFFB_01865 PF03129 Anticodon binding domain XFFB_01865 PF04073 Aminoacyl-tRNA editing domain XFFB_01870 PF00816 H-NS histone family XFFB_01875 PF04342 XFFB_01875 XFFB_01880 PF00072 Response regulator receiver domain XFFB_01885 PF00107 Zinc-binding dehydrogenase XFFB_01895 PF01145 SPFH domain / Band 7 family XFFB_01900 PF09838 XFFB_01900 XFFB_01905 PF00709 Adenylosuccinate synthetase XFFB_01910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XFFB_01910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XFFB_01915 PF00334 Nucleoside diphosphate kinase XFFB_01920 PF04055 Radical SAM superfamily XFFB_01925 PF13181 Tetratricopeptide repeat XFFB_01935 PF09976 Tetratricopeptide repeat XFFB_01940 PF01011 PQQ enzyme repeat XFFB_01940 PF13360 PQQ-like domain XFFB_01945 PF01926 50S ribosome-binding GTPase XFFB_01945 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal XFFB_01950 PF00581 Rhodanese-like domain XFFB_01950 PF00899 ThiF family XFFB_01955 PF00563 EAL domain XFFB_01955 PF12792 XFFB_01955 XFFB_01965 PF07963 Prokaryotic N-terminal methylation motif XFFB_01965 PF12019 Type II transport protein GspH XFFB_01975 PF16074 XFFB_01975 XFFB_01980 PF14341 XFFB_01980 XFFB_01990 PF07963 Prokaryotic N-terminal methylation motif XFFB_01990 PF16732 XFFB_01990 XFFB_02010 PF00436 Single-strand binding protein family XFFB_02025 PF00132 Bacterial transferase hexapeptide (six repeats) XFFB_02030 PF00114 Pilin (bacterial filament) XFFB_02050 PF07603 XFFB_02050 XFFB_02070 PF00717 Peptidase S24-like XFFB_02070 PF01381 Helix-turn-helix XFFB_02075 PF15943 XFFB_02075 XFFB_02095 PF01807 CHC2 zinc finger XFFB_02100 PF05272 XFFB_02100 XFFB_02120 PF05136 XFFB_02120 XFFB_02130 PF09956 XFFB_02130 XFFB_02140 PF00959 Phage lysozyme XFFB_02185 PF09356 XFFB_02185 XFFB_02185 PF09931 XFFB_02185 XFFB_02200 PF13550 XFFB_02200 XFFB_02220 PF01381 Helix-turn-helix XFFB_02225 PF05016 Plasmid stabilisation system protein XFFB_02235 PF01385 XFFB_02235 XFFB_02235 PF07282 XFFB_02235 XFFB_02240 PF13274 XFFB_02240 XFFB_02245 PF00114 Pilin (bacterial filament) XFFB_02245 PF07963 Prokaryotic N-terminal methylation motif XFFB_02275 PF01588 Putative tRNA binding domain XFFB_02275 PF09334 tRNA synthetases class I (M) XFFB_02280 PF00593 TonB dependent receptor XFFB_02280 PF07715 TonB-dependent Receptor Plug Domain XFFB_02285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XFFB_02290 PF04348 LppC putative lipoprotein XFFB_02295 PF02021 Uncharacterised protein family UPF0102 XFFB_02300 PF03193 Protein of unknown function, DUF258 XFFB_02305 PF00127 Copper binding proteins, plastocyanin/azurin family XFFB_02315 PF00117 Glutamine amidotransferase class-I XFFB_02325 PF00902 Sec-independent protein translocase protein (TatC) XFFB_02330 PF02416 mttA/Hcf106 family XFFB_02335 PF02416 mttA/Hcf106 family XFFB_02340 PF04366 XFFB_02340 XFFB_02345 PF00762 Ferrochelatase XFFB_02350 PF01863 Protein of unknown function DUF45 XFFB_02355 PF04381 Putative exonuclease, RdgC XFFB_02360 PF01171 PP-loop family XFFB_02370 PF07977 FabA-like domain XFFB_02385 PF01431 Peptidase family M13 XFFB_02385 PF05649 Peptidase family M13 XFFB_02395 PF11306 Protein of unknown function (DUF3108) XFFB_02400 PF11306 Protein of unknown function (DUF3108) XFFB_02405 PF00551 Formyl transferase XFFB_02410 PF00586 AIR synthase related protein, N-terminal domain XFFB_02410 PF02769 AIR synthase related protein, C-terminal domain XFFB_02415 PF09839 XFFB_02415 XFFB_02420 PF01594 XFFB_02420 XFFB_02425 PF01695 IstB-like ATP binding protein XFFB_02430 PF00483 Nucleotidyl transferase XFFB_02435 PF01636 Phosphotransferase enzyme family XFFB_02440 PF12836 Helix-hairpin-helix motif XFFB_02445 PF02424 ApbE family XFFB_02450 PF10670 XFFB_02450 XFFB_02455 PF10029 XFFB_02455 XFFB_02465 PF13640 2OG-Fe(II) oxygenase superfamily XFFB_02470 PF00593 TonB dependent receptor XFFB_02470 PF07715 TonB-dependent Receptor Plug Domain XFFB_02475 PF14346 Domain of unknown function (DUF4398) XFFB_02485 PF04325 Protein of unknown function (DUF465) XFFB_02490 PF00291 Pyridoxal-phosphate dependent enzyme XFFB_02490 PF00571 CBS domain XFFB_02495 PF05050 Methyltransferase FkbM domain XFFB_02500 PF00534 Glycosyl transferases group 1 XFFB_02500 PF13439 Glycosyltransferase Family 4 XFFB_02505 PF16363 XFFB_02505 XFFB_02510 PF16363 XFFB_02510 XFFB_02515 PF16363 XFFB_02515 XFFB_02520 PF00535 Glycosyl transferase family 2 XFFB_02525 PF04138 XFFB_02525 XFFB_02540 PF00118 TCP-1/cpn60 chaperonin family XFFB_02545 PF00166 Chaperonin 10 Kd subunit XFFB_02550 PF03091 CutA1 divalent ion tolerance protein XFFB_02555 PF11412 Disulphide bond corrector protein DsbC XFFB_02555 PF13899 Thioredoxin-like XFFB_02560 PF08543 Phosphomethylpyrimidine kinase XFFB_02565 PF01488 Shikimate / quinate 5-dehydrogenase XFFB_02565 PF08501 Shikimate dehydrogenase substrate binding domain XFFB_02580 PF10137 XFFB_02580 XFFB_02590 PF00589 Phage integrase family XFFB_02590 PF13356 Domain of unknown function (DUF4102) XFFB_02595 PF12728 Helix-turn-helix domain XFFB_02600 PF13481 AAA domain XFFB_02640 PF12183 Restriction endonuclease NotI XFFB_02645 PF01555 DNA methylase XFFB_02655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XFFB_02655 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XFFB_02665 PF00633 Helix-hairpin-helix motif XFFB_02665 PF00730 HhH-GPD superfamily base excision DNA repair protein XFFB_02665 PF10576 Iron-sulfur binding domain of endonuclease III XFFB_02670 PF01694 Rhomboid family XFFB_02675 PF04235 XFFB_02675 XFFB_02680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XFFB_02685 PF00877 NlpC/P60 family XFFB_02690 PF00877 NlpC/P60 family XFFB_02700 PF00375 Sodium:dicarboxylate symporter family XFFB_02710 PF01171 PP-loop family XFFB_02710 PF09179 TilS substrate binding domain XFFB_02710 PF11734 TilS substrate C-terminal domain XFFB_02715 PF02609 Exonuclease VII small subunit XFFB_02720 PF00348 Polyprenyl synthetase XFFB_02745 PF00353 Hemolysin-type calcium-binding repeat (2 copies) XFFB_02745 PF06594 XFFB_02745 XFFB_02750 PF00456 Transketolase, thiamine diphosphate binding domain XFFB_02755 PF00698 Acyl transferase domain XFFB_02760 PF13561 Enoyl-(Acyl carrier protein) reductase XFFB_02765 PF00550 Phosphopantetheine attachment site XFFB_02770 PF00109 Beta-ketoacyl synthase, N-terminal domain XFFB_02770 PF02801 Beta-ketoacyl synthase, C-terminal domain XFFB_02780 PF02618 YceG-like family XFFB_02785 PF13177 DNA polymerase III, delta subunit XFFB_02790 PF07238 PilZ domain XFFB_02805 PF13500 AAA domain XFFB_02810 PF00459 Inositol monophosphatase family XFFB_02815 PF00588 SpoU rRNA Methylase family XFFB_02820 PF13394 4Fe-4S single cluster domain XFFB_02825 PF01132 Elongation factor P (EF-P) OB domain XFFB_02825 PF08207 Elongation factor P (EF-P) KOW-like domain XFFB_02825 PF09285 Elongation factor P, C-terminal XFFB_02830 PF01979 Amidohydrolase family XFFB_02835 PF13489 Methyltransferase domain XFFB_02840 PF13419 Haloacid dehalogenase-like hydrolase XFFB_02855 PF00561 alpha/beta hydrolase fold XFFB_02870 PF03918 Cytochrome C biogenesis protein XFFB_02875 PF08534 Redoxin XFFB_02880 PF01578 XFFB_02880 XFFB_02880 PF16327 XFFB_02880 XFFB_02885 PF03100 CcmE XFFB_02890 PF01578 XFFB_02890 XFFB_02900 PF00005 ABC transporter XFFB_02910 PF00795 Carbon-nitrogen hydrolase XFFB_02920 PF00849 RNA pseudouridylate synthase XFFB_02920 PF01479 S4 domain XFFB_02925 PF04079 Putative transcriptional regulators (Ypuh-like) XFFB_02930 PF02616 ScpA/B protein XFFB_02935 PF01722 BolA-like protein XFFB_02940 PF10091 Putative glucoamylase XFFB_02945 PF13416 Bacterial extracellular solute-binding protein XFFB_02950 PF00528 Binding-protein-dependent transport system inner membrane component XFFB_02955 PF00528 Binding-protein-dependent transport system inner membrane component XFFB_02960 PF00754 F5/8 type C domain XFFB_02960 PF06202 Amylo-alpha-1,6-glucosidase XFFB_02965 PF01963 XFFB_02965 XFFB_02970 PF00795 Carbon-nitrogen hydrolase XFFB_02975 PF04371 Porphyromonas-type peptidyl-arginine deiminase XFFB_02985 PF02224 Cytidylate kinase XFFB_02990 PF00575 S1 RNA binding domain XFFB_02995 PF00216 Bacterial DNA-binding protein XFFB_03000 PF06305 XFFB_03000 XFFB_03005 PF13432 Tetratricopeptide repeat XFFB_03010 PF00953 Glycosyl transferase family 4 XFFB_03015 PF02719 Polysaccharide biosynthesis protein XFFB_03015 PF13727 CoA-binding domain XFFB_03020 PF00483 Nucleotidyl transferase XFFB_03025 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain XFFB_03025 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain XFFB_03030 PF00478 IMP dehydrogenase / GMP reductase domain XFFB_03030 PF00571 CBS domain XFFB_03035 PF00117 Glutamine amidotransferase class-I XFFB_03035 PF00958 GMP synthase C terminal domain XFFB_03035 PF02540 NAD synthase XFFB_03055 PF00829 Ribosomal prokaryotic L21 protein XFFB_03060 PF01016 Ribosomal L27 protein XFFB_03065 PF01018 GTP1/OBG XFFB_03065 PF01926 50S ribosome-binding GTPase XFFB_03070 PF01649 Ribosomal protein S20 XFFB_03075 PF03023 XFFB_03075 XFFB_03080 PF01687 Riboflavin kinase XFFB_03080 PF06574 FAD synthetase XFFB_03090 PF01252 XFFB_03090 XFFB_03095 PF02401 LytB protein XFFB_03110 PF13166 XFFB_03110 XFFB_03115 PF13086 AAA domain XFFB_03115 PF13087 AAA domain XFFB_03115 PF13091 PLD-like domain XFFB_03125 PF00353 Hemolysin-type calcium-binding repeat (2 copies) XFFB_03125 PF06594 XFFB_03125 XFFB_03155 PF13437 HlyD family secretion protein XFFB_03160 PF00005 ABC transporter XFFB_03160 PF00664 ABC transporter transmembrane region XFFB_03160 PF03412 Peptidase C39 family XFFB_03165 PF00155 Aminotransferase class I and II XFFB_03175 PF00462 Glutaredoxin XFFB_03175 PF00581 Rhodanese-like domain XFFB_03180 PF01183 Glycosyl hydrolases family 25 XFFB_03190 PF00107 Zinc-binding dehydrogenase XFFB_03190 PF08240 Alcohol dehydrogenase GroES-like domain XFFB_03200 PF00873 AcrB/AcrD/AcrF family XFFB_03205 PF00873 AcrB/AcrD/AcrF family XFFB_03210 PF16576 XFFB_03210 XFFB_03230 PF00330 Aconitase family (aconitate hydratase) XFFB_03235 PF00694 Aconitase C-terminal domain XFFB_03240 PF00180 Isocitrate/isopropylmalate dehydrogenase XFFB_03245 PF02563 Polysaccharide biosynthesis/export protein XFFB_03245 PF10531 SLBB domain XFFB_03250 PF02706 Chain length determinant protein XFFB_03250 PF13807 XFFB_03250 XFFB_03255 PF02397 XFFB_03255 XFFB_03255 PF13727 CoA-binding domain XFFB_03270 PF00534 Glycosyl transferases group 1 XFFB_03270 PF13439 Glycosyltransferase Family 4 XFFB_03280 PF13440 XFFB_03280 XFFB_03290 PF03808 XFFB_03290 XFFB_03295 PF00072 Response regulator receiver domain XFFB_03295 PF01627 Hpt domain XFFB_03305 PF01928 CYTH domain XFFB_03315 PF00156 Phosphoribosyl transferase domain XFFB_03320 PF01048 Phosphorylase superfamily XFFB_03330 PF01668 SmpB protein XFFB_03335 PF03364 Polyketide cyclase / dehydrase and lipid transport XFFB_03340 PF03658 RnfH family Ubiquitin XFFB_03345 PF04355 SmpA / OmlA family XFFB_03350 PF01475 Ferric uptake regulator family XFFB_03355 PF02463 RecF/RecN/SMC N terminal domain XFFB_03360 PF01628 HrcA protein C terminal domain XFFB_03360 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding XFFB_03365 PF01025 GrpE XFFB_03370 PF00012 Hsp70 protein XFFB_03375 PF00226 DnaJ domain XFFB_03375 PF00684 DnaJ central domain XFFB_03375 PF01556 DnaJ C terminal domain XFFB_03380 PF01842 ACT domain XFFB_03380 PF02153 Prephenate dehydrogenase XFFB_03385 PF00072 Response regulator receiver domain XFFB_03385 PF00486 Transcriptional regulatory protein, C terminal XFFB_03390 PF01219 Prokaryotic diacylglycerol kinase XFFB_03395 PF01790 XFFB_03395 XFFB_03400 PF00303 Thymidylate synthase XFFB_03405 PF00186 Dihydrofolate reductase XFFB_03410 PF00561 alpha/beta hydrolase fold XFFB_03410 PF08386 TAP-like protein XFFB_03415 PF00005 ABC transporter XFFB_03420 PF12679 XFFB_03420 XFFB_03425 PF03544 Gram-negative bacterial TonB protein C-terminal XFFB_03430 PF00266 Aminotransferase class-V XFFB_03435 PF00800 Prephenate dehydratase XFFB_03435 PF01817 Chorismate mutase type II XFFB_03435 PF01842 ACT domain XFFB_03440 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XFFB_03475 PF04865 XFFB_03475 XFFB_03480 PF00959 Phage lysozyme XFFB_03485 PF01555 DNA methylase XFFB_03495 PF01541 GIY-YIG catalytic domain XFFB_03495 PF02151 UvrB/uvrC motif XFFB_03495 PF08459 UvrC Helix-hairpin-helix N-terminal XFFB_03500 PF01066 CDP-alcohol phosphatidyltransferase XFFB_03520 PF00490 Delta-aminolevulinic acid dehydratase XFFB_03525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XFFB_03540 PF00202 Aminotransferase class-III XFFB_03545 PF10609 ParA/MinD ATPase like XFFB_03550 PF02348 Cytidylyltransferase XFFB_03555 PF01451 Low molecular weight phosphotyrosine protein phosphatase XFFB_03560 PF01555 DNA methylase XFFB_03570 PF00176 SNF2 family N-terminal domain XFFB_03580 PF08774 VRR-NUC domain XFFB_03590 PF13986 XFFB_03590 XFFB_03595 PF00589 Phage integrase family XFFB_03600 PF03544 Gram-negative bacterial TonB protein C-terminal XFFB_03605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XFFB_03605 PF02403 Seryl-tRNA synthetase N-terminal domain XFFB_03610 PF00753 Metallo-beta-lactamase superfamily XFFB_03615 PF13614 AAA domain XFFB_03620 PF02195 ParB-like nuclease domain XFFB_03625 PF01370 NAD dependent epimerase/dehydratase family XFFB_03630 PF00535 Glycosyl transferase family 2 XFFB_03635 PF07578 Lipid A Biosynthesis N-terminal domain XFFB_03640 PF00501 AMP-binding enzyme XFFB_03650 PF02677 XFFB_03650 XFFB_03655 PF01717 Cobalamin-independent synthase, Catalytic domain XFFB_03655 PF08267 Cobalamin-independent synthase, N-terminal domain XFFB_03660 PF01263 Aldose 1-epimerase XFFB_03670 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XFFB_03670 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XFFB_03675 PF00230 Major intrinsic protein XFFB_03680 PF01266 FAD dependent oxidoreductase XFFB_03680 PF16901 XFFB_03680 XFFB_03690 PF03169 XFFB_03690 XFFB_03695 PF00326 Prolyl oligopeptidase family XFFB_03695 PF07676 WD40-like Beta Propeller Repeat XFFB_03700 PF13360 PQQ-like domain XFFB_03710 PF02659 XFFB_03710 XFFB_03715 PF00501 AMP-binding enzyme XFFB_03715 PF13193 AMP-binding enzyme C-terminal domain XFFB_03715 PF16177 XFFB_03715 XFFB_03720 PF04341 XFFB_03720 XFFB_03730 PF02779 Transketolase, pyrimidine binding domain XFFB_03730 PF02780 Transketolase, C-terminal domain XFFB_03730 PF13292 1-deoxy-D-xylulose-5-phosphate synthase XFFB_03735 PF02565 Recombination protein O C terminal XFFB_03735 PF11967 Recombination protein O N terminal XFFB_03740 PF01926 50S ribosome-binding GTPase XFFB_03740 PF07650 KH domain XFFB_03745 PF00035 Double-stranded RNA binding motif XFFB_03745 PF14622 Ribonuclease-III-like XFFB_03750 PF16137 XFFB_03750 XFFB_03755 PF00717 Peptidase S24-like XFFB_03760 PF00009 Elongation factor Tu GTP binding domain XFFB_03760 PF00679 Elongation factor G C-terminus XFFB_03760 PF03144 Elongation factor Tu domain 2 XFFB_03760 PF06421 GTP-binding protein LepA C-terminus XFFB_03765 PF13180 PDZ domain XFFB_03765 PF13365 Trypsin-like peptidase domain XFFB_03770 PF03872 Anti sigma-E protein RseA, N-terminal domain XFFB_03775 PF04542 Sigma-70 region 2 XFFB_03775 PF08281 Sigma-70, region 4 XFFB_03785 PF00593 TonB dependent receptor XFFB_03785 PF07715 TonB-dependent Receptor Plug Domain XFFB_03805 PF00011 Hsp20/alpha crystallin family XFFB_03815 PF00141 Peroxidase XFFB_03825 PF00768 D-alanyl-D-alanine carboxypeptidase XFFB_03825 PF07943 Penicillin-binding protein 5, C-terminal domain XFFB_03830 PF02622 Uncharacterized ACR, COG1678 XFFB_03835 PF03652 Uncharacterised protein family (UPF0081) XFFB_03840 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XFFB_03840 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XFFB_03845 PF00696 Amino acid kinase family XFFB_03845 PF00742 Homoserine dehydrogenase XFFB_03845 PF03447 Homoserine dehydrogenase, NAD binding domain XFFB_03845 PF13840 ACT domain XFFB_03850 PF00288 GHMP kinases N terminal domain XFFB_03850 PF08544 GHMP kinases C terminal XFFB_03855 PF00291 Pyridoxal-phosphate dependent enzyme XFFB_03855 PF14821 Threonine synthase N terminus XFFB_03860 PF03129 Anticodon binding domain XFFB_03860 PF13393 Histidyl-tRNA synthetase XFFB_03865 PF01371 Trp repressor protein XFFB_03870 PF01634 ATP phosphoribosyltransferase XFFB_03870 PF08029 HisG, C-terminal domain XFFB_03880 PF00155 Aminotransferase class I and II XFFB_03885 PF00475 Imidazoleglycerol-phosphate dehydratase XFFB_03890 PF00117 Glutamine amidotransferase class-I XFFB_03895 PF00977 Histidine biosynthesis protein XFFB_03900 PF00977 Histidine biosynthesis protein XFFB_03905 PF01502 Phosphoribosyl-AMP cyclohydrolase XFFB_03905 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase XFFB_03915 PF03079 ARD/ARD' family XFFB_03920 PF00596 Class II Aldolase and Adducin N-terminal domain XFFB_03925 PF13520 Amino acid permease XFFB_03930 PF13520 Amino acid permease XFFB_03935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XFFB_03935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XFFB_03940 PF01565 FAD binding domain XFFB_03940 PF02913 FAD linked oxidases, C-terminal domain XFFB_03965 PF04591 Protein of unknown function, DUF596 XFFB_03990 PF06381 XFFB_03990 XFFB_03995 PF13744 Helix-turn-helix domain XFFB_04000 PF05973 XFFB_04000 XFFB_04020 PF09950 XFFB_04020 XFFB_04045 PF11863 XFFB_04045 XFFB_04050 PF11681 XFFB_04050 XFFB_04075 PF05016 Plasmid stabilisation system protein XFFB_04135 PF00005 ABC transporter XFFB_04140 PF00255 Glutathione peroxidase XFFB_04145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XFFB_04145 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XFFB_04150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XFFB_04150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XFFB_04150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XFFB_04155 PF04102 SlyX XFFB_04160 PF09831 XFFB_04160 XFFB_04165 PF07690 Major Facilitator Superfamily XFFB_04170 PF00294 pfkB family carbohydrate kinase XFFB_04175 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) XFFB_04180 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family XFFB_04195 PF01022 Bacterial regulatory protein, arsR family XFFB_04195 PF08241 Methyltransferase domain XFFB_04205 PF00144 Beta-lactamase XFFB_04215 PF02230 Phospholipase/Carboxylesterase XFFB_04220 PF06580 XFFB_04220 XFFB_04225 PF00072 Response regulator receiver domain XFFB_04225 PF04397 LytTr DNA-binding domain XFFB_04230 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain XFFB_04230 PF03900 Porphobilinogen deaminase, C-terminal domain XFFB_04235 PF04338 Protein of unknown function, DUF481 XFFB_04245 PF00437 Type II/IV secretion system protein XFFB_04250 PF00437 Type II/IV secretion system protein XFFB_04260 PF00535 Glycosyl transferase family 2 XFFB_04265 PF00535 Glycosyl transferase family 2 XFFB_04270 PF13723 XFFB_04270 XFFB_04275 PF00109 Beta-ketoacyl synthase, N-terminal domain XFFB_04275 PF02801 Beta-ketoacyl synthase, C-terminal domain XFFB_04290 PF03706 XFFB_04290 XFFB_04290 PF09924 Uncharacterized conserved protein (DUF2156) XFFB_04295 PF01042 Endoribonuclease L-PSP XFFB_04310 PF01430 Hsp33 protein XFFB_04315 PF00912 Transglycosylase XFFB_04320 PF00488 MutS domain V XFFB_04320 PF01624 MutS domain I XFFB_04320 PF05188 MutS domain II XFFB_04320 PF05190 MutS family domain IV XFFB_04320 PF05192 MutS domain III XFFB_04325 PF01168 Alanine racemase, N-terminal domain XFFB_04335 PF00589 Phage integrase family XFFB_04335 PF13356 Domain of unknown function (DUF4102) XFFB_04335 PF14659 Phage integrase, N-terminal SAM-like domain XFFB_04340 PF03466 LysR substrate binding domain XFFB_04345 PF13560 Helix-turn-helix domain XFFB_04355 PF00248 Aldo/keto reductase family XFFB_04360 PF00248 Aldo/keto reductase family XFFB_04365 PF01361 Tautomerase enzyme XFFB_04370 PF13561 Enoyl-(Acyl carrier protein) reductase XFFB_04375 PF00107 Zinc-binding dehydrogenase XFFB_04375 PF08240 Alcohol dehydrogenase GroES-like domain XFFB_04380 PF07690 Major Facilitator Superfamily XFFB_04385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XFFB_04385 PF03466 LysR substrate binding domain XFFB_04390 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XFFB_04395 PF03358 NADPH-dependent FMN reductase XFFB_04400 PF00107 Zinc-binding dehydrogenase XFFB_04400 PF08240 Alcohol dehydrogenase GroES-like domain XFFB_04405 PF07995 Glucose / Sorbosone dehydrogenase XFFB_04410 PF10012 XFFB_04410 XFFB_04415 PF03807 NADP oxidoreductase coenzyme F420-dependent XFFB_04425 PF12706 Beta-lactamase superfamily domain XFFB_04430 PF07995 Glucose / Sorbosone dehydrogenase XFFB_04440 PF08450 SMP-30/Gluconolaconase/LRE-like region XFFB_04445 PF07859 alpha/beta hydrolase fold XFFB_04450 PF00106 short chain dehydrogenase XFFB_04455 PF01738 Dienelactone hydrolase family XFFB_04460 PF00107 Zinc-binding dehydrogenase XFFB_04460 PF08240 Alcohol dehydrogenase GroES-like domain XFFB_04465 PF13460 NADH(P)-binding XFFB_04470 PF01872 RibD C-terminal domain XFFB_04475 PF07690 Major Facilitator Superfamily XFFB_04480 PF05448 Acetyl xylan esterase (AXE1) XFFB_04490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XFFB_04490 PF03466 LysR substrate binding domain XFFB_04505 PF08808 XFFB_04505 XFFB_04510 PF12553 XFFB_04510 XFFB_04530 PF11679 XFFB_04530 XFFB_04535 PF12101 XFFB_04535 XFFB_04545 PF01507 Phosphoadenosine phosphosulfate reductase family XFFB_04550 PF11284 XFFB_04550 XFFB_04560 PF07690 Major Facilitator Superfamily XFFB_04565 PF02627 Carboxymuconolactone decarboxylase family XFFB_04570 PF07883 Cupin domain XFFB_04575 PF07883 Cupin domain XFFB_04580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XFFB_04580 PF03466 LysR substrate binding domain XFFB_04625 PF00145 C-5 cytosine-specific DNA methylase XFFB_04635 PF00436 Single-strand binding protein family XFFB_04640 PF11358 XFFB_04640 XFFB_04645 PF08900 XFFB_04645 XFFB_04660 PF11198 XFFB_04660 XFFB_04675 PF13614 AAA domain XFFB_04680 PF05930 Prophage CP4-57 regulatory protein (AlpA) XFFB_04715 PF05036 Sporulation related domain XFFB_04720 PF03309 Type III pantothenate kinase XFFB_04725 PF02237 Biotin protein ligase C terminal domain XFFB_04725 PF03099 Biotin/lipoate A/B protein ligase family XFFB_04725 PF08279 HTH domain XFFB_04730 PF07219 XFFB_04730 XFFB_04735 PF04375 XFFB_04735 XFFB_04740 PF02602 Uroporphyrinogen-III synthase HemD XFFB_04750 PF00581 Rhodanese-like domain XFFB_04755 PF02556 Preprotein translocase subunit SecB XFFB_04760 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus XFFB_04760 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus XFFB_04770 PF02086 D12 class N6 adenine-specific DNA methyltransferase XFFB_04790 PF12169 DNA polymerase III subunits gamma and tau domain III XFFB_04790 PF12170 DNA polymerase III tau subunit V interacting with alpha XFFB_04790 PF13177 DNA polymerase III, delta subunit XFFB_04795 PF02575 YbaB/EbfC DNA-binding family XFFB_04800 PF02132 RecR protein XFFB_04800 PF13662 Toprim domain XFFB_04805 PF01230 HIT domain XFFB_04810 PF03843 XFFB_04810 XFFB_04815 PF01841 Transglutaminase-like superfamily XFFB_04815 PF11992 XFFB_04815 XFFB_04820 PF01882 XFFB_04820 XFFB_04825 PF07726 ATPase family associated with various cellular activities (AAA) XFFB_04830 PF13231 XFFB_04830 XFFB_04835 PF02620 XFFB_04835 XFFB_04840 PF01783 Ribosomal L32p protein family XFFB_04845 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XFFB_04845 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XFFB_04850 PF00682 HMGL-like XFFB_04850 PF08502 LeuA allosteric (dimerisation) domain XFFB_04855 PF00291 Pyridoxal-phosphate dependent enzyme XFFB_04860 PF13710 ACT domain XFFB_04865 PF00205 Thiamine pyrophosphate enzyme, central domain XFFB_04865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XFFB_04865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XFFB_04870 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain XFFB_04870 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain XFFB_04875 PF00595 PDZ domain (Also known as DHR or GLGF) XFFB_04875 PF03572 Peptidase family S41 XFFB_04875 PF11818 XFFB_04875 XFFB_04880 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family XFFB_04885 PF02566 OsmC-like protein XFFB_04890 PF03969 AFG1-like ATPase XFFB_04895 PF02129 X-Pro dipeptidyl-peptidase (S15 family) XFFB_04900 PF02492 CobW/HypB/UreG, nucleotide-binding domain XFFB_04900 PF07683 Cobalamin synthesis protein cobW C-terminal domain XFFB_04905 PF00551 Formyl transferase XFFB_04910 PF02036 SCP-2 sterol transfer family XFFB_04915 PF03109 XFFB_04915 XFFB_04920 PF13899 Thioredoxin-like XFFB_04925 PF07055 Enoyl reductase FAD binding domain XFFB_04925 PF12241 Trans-2-enoyl-CoA reductase catalytic region XFFB_04925 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase XFFB_04940 PF00589 Phage integrase family XFFB_04945 PF13986 XFFB_04945 XFFB_04950 PF00436 Single-strand binding protein family XFFB_04955 PF02498 XFFB_04955 XFFB_04960 PF09588 YqaJ-like viral recombinase domain XFFB_04965 PF03837 XFFB_04965 XFFB_05000 PF02661 Fic/DOC family XFFB_05005 PF00717 Peptidase S24-like XFFB_05035 PF02498 XFFB_05035 XFFB_05040 PF02498 XFFB_05040 XFFB_05045 PF07120 XFFB_05045 XFFB_05070 PF02498 XFFB_05070 XFFB_05075 PF00959 Phage lysozyme XFFB_05080 PF16083 XFFB_05080 XFFB_05100 PF17289 XFFB_05100 XFFB_05115 PF04233 XFFB_05115 XFFB_05120 PF09979 XFFB_05120 XFFB_05130 PF09950 XFFB_05130 XFFB_05160 PF11863 XFFB_05160 XFFB_05165 PF11681 XFFB_05165 XFFB_05185 PF05016 Plasmid stabilisation system protein XFFB_05220 PF01381 Helix-turn-helix XFFB_05225 PF05973 XFFB_05225 XFFB_05235 PF11041 XFFB_05235 XFFB_05240 PF07484 Phage Tail Collar Domain XFFB_05250 PF13274 XFFB_05250 XFFB_05260 PF01447 Thermolysin metallopeptidase, catalytic domain XFFB_05260 PF02868 Thermolysin metallopeptidase, alpha-helical domain XFFB_05260 PF16485 XFFB_05260 XFFB_05275 PF06258 XFFB_05275 XFFB_05280 PF04264 YceI-like domain XFFB_05290 PF00120 Glutamine synthetase, catalytic domain XFFB_05290 PF03951 Glutamine synthetase, beta-Grasp domain XFFB_05295 PF00543 Nitrogen regulatory protein P-II XFFB_05300 PF00909 Ammonium Transporter Family XFFB_05305 PF01131 DNA topoisomerase XFFB_05310 PF01131 DNA topoisomerase XFFB_05315 PF00072 Response regulator receiver domain XFFB_05315 PF00158 Sigma-54 interaction domain XFFB_05315 PF02954 Bacterial regulatory protein, Fis family XFFB_05320 PF00512 His Kinase A (phospho-acceptor) domain XFFB_05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFFB_05330 PF00082 Subtilase family XFFB_05330 PF03797 Autotransporter beta-domain XFFB_05330 PF12951 XFFB_05330 XFFB_05335 PF03572 Peptidase family S41 XFFB_05335 PF14684 Tricorn protease C1 domain XFFB_05340 PF03572 Peptidase family S41 XFFB_05340 PF14684 Tricorn protease C1 domain XFFB_05345 PF05681 XFFB_05345 XFFB_05345 PF05683 Fumarase C-terminus XFFB_05350 PF00152 tRNA synthetases class II (D, K and N) XFFB_05350 PF01336 OB-fold nucleic acid binding domain XFFB_05350 PF02938 GAD domain XFFB_05355 PF06508 Queuosine biosynthesis protein QueC XFFB_05385 PF10734 XFFB_05385 XFFB_05390 PF05707 Zonular occludens toxin (Zot) XFFB_05405 PF05707 Zonular occludens toxin (Zot) XFFB_05410 PF10734 XFFB_05410 XFFB_05420 PF10389 Bacteriophage coat protein B XFFB_05430 PF02486 XFFB_05430 XFFB_05445 PF12375 XFFB_05445 XFFB_05460 PF10734 XFFB_05460 XFFB_05470 PF10389 Bacteriophage coat protein B XFFB_05480 PF02486 XFFB_05480 XFFB_05495 PF00300 Histidine phosphatase superfamily (branch 1) XFFB_05500 PF10459 Peptidase S46 XFFB_05505 PF01964 ThiC family XFFB_05505 PF13667 ThiC-associated domain XFFB_05510 PF00175 Oxidoreductase NAD-binding domain XFFB_05510 PF00970 Oxidoreductase FAD-binding domain XFFB_05515 PF00255 Glutathione peroxidase XFFB_05520 PF00854 POT family XFFB_05525 PF04493 Endonuclease V XFFB_05530 PF00300 Histidine phosphatase superfamily (branch 1) XFFB_05535 PF04055 Radical SAM superfamily XFFB_05535 PF13394 4Fe-4S single cluster domain XFFB_05540 PF13525 Outer membrane lipoprotein XFFB_05540 PF16331 XFFB_05540 XFFB_05545 PF00691 OmpA family XFFB_05550 PF04052 TolB amino-terminal domain XFFB_05550 PF07676 WD40-like Beta Propeller Repeat XFFB_05555 PF13103 TonB C terminal XFFB_05560 PF02472 Biopolymer transport protein ExbD/TolR XFFB_05565 PF01618 XFFB_05565 XFFB_05570 PF03061 Thioesterase superfamily XFFB_05575 PF05491 Holliday junction DNA helicase ruvB C-terminus XFFB_05575 PF05496 Holliday junction DNA helicase ruvB N-terminus XFFB_05580 PF02705 XFFB_05580 XFFB_05585 PF01330 RuvA N terminal domain XFFB_05585 PF07499 RuvA, C-terminal domain XFFB_05585 PF14520 Helix-hairpin-helix domain XFFB_05590 PF02075 Crossover junction endodeoxyribonuclease RuvC XFFB_05595 PF01709 Transcriptional regulator XFFB_05600 PF04362 Bacterial Fe(2+) trafficking XFFB_05605 PF00730 HhH-GPD superfamily base excision DNA repair protein XFFB_05605 PF14815 NUDIX domain XFFB_05610 PF00448 SRP54-type protein, GTPase domain XFFB_05610 PF02881 SRP54-type protein, helical bundle domain XFFB_05620 PF14279 XFFB_05620 XFFB_05625 PF01026 TatD related DNase XFFB_05635 PF00425 chorismate binding enzyme XFFB_05640 PF00501 AMP-binding enzyme XFFB_05645 PF00583 Acetyltransferase (GNAT) family XFFB_05650 PF14518 Iron-containing redox enzyme XFFB_05655 PF03358 NADPH-dependent FMN reductase XFFB_05660 PF01371 Trp repressor protein XFFB_05665 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XFFB_05665 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XFFB_05675 PF02445 Quinolinate synthetase A protein XFFB_05680 PF00890 FAD binding domain XFFB_05680 PF02910 Fumarate reductase flavoprotein C-term XFFB_05685 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain XFFB_05685 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain XFFB_05705 PF03988 XFFB_05705 XFFB_05715 PF13700 XFFB_05715 XFFB_05730 PF03372 Endonuclease/Exonuclease/phosphatase family XFFB_05735 PF01648 4'-phosphopantetheinyl transferase superfamily XFFB_05740 PF02527 rRNA small subunit methyltransferase G XFFB_05745 PF00456 Transketolase, thiamine diphosphate binding domain XFFB_05745 PF02779 Transketolase, pyrimidine binding domain XFFB_05745 PF02780 Transketolase, C-terminal domain XFFB_05750 PF00375 Sodium:dicarboxylate symporter family XFFB_05755 PF01625 Peptide methionine sulfoxide reductase XFFB_05760 PF08332 Calcium/calmodulin dependent protein kinase II Association XFFB_05770 PF00216 Bacterial DNA-binding protein XFFB_05775 PF01432 Peptidase family M3 XFFB_05780 PF06903 XFFB_05780 XFFB_05785 PF08245 Mur ligase middle domain XFFB_05790 PF05036 Sporulation related domain XFFB_05800 PF13522 Glutamine amidotransferase domain XFFB_05805 PF01584 CheW-like domain XFFB_05810 PF01339 CheB methylesterase XFFB_05815 PF00072 Response regulator receiver domain XFFB_05815 PF01584 CheW-like domain XFFB_05815 PF01627 Hpt domain XFFB_05815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFFB_05815 PF02895 Signal transducing histidine kinase, homodimeric domain XFFB_05820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XFFB_05825 PF01584 CheW-like domain XFFB_05830 PF00072 Response regulator receiver domain XFFB_05835 PF02951 Prokaryotic glutathione synthetase, N-terminal domain XFFB_05835 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain XFFB_05840 PF03544 Gram-negative bacterial TonB protein C-terminal XFFB_05850 PF02092 XFFB_05850 XFFB_05850 PF05746 DALR anticodon binding domain XFFB_05855 PF02091 Glycyl-tRNA synthetase alpha subunit XFFB_05860 PF00795 Carbon-nitrogen hydrolase XFFB_05860 PF02540 NAD synthase XFFB_05865 PF03692 XFFB_05865 XFFB_05880 PF01555 DNA methylase XFFB_05885 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XFFB_05885 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XFFB_05890 PF13698 XFFB_05890 XFFB_05895 PF00588 SpoU rRNA Methylase family XFFB_05900 PF01808 AICARFT/IMPCHase bienzyme XFFB_05900 PF02142 MGS-like domain XFFB_05905 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain XFFB_05905 PF02843 Phosphoribosylglycinamide synthetase, C domain XFFB_05905 PF02844 Phosphoribosylglycinamide synthetase, N domain XFFB_05915 PF12805 XFFB_05915 XFFB_05915 PF13515 XFFB_05915 XFFB_05925 PF03895 YadA-like C-terminal region XFFB_05925 PF05658 Head domain of trimeric autotransporter adhesin XFFB_05925 PF05662 Coiled stalk of trimeric autotransporter adhesin XFFB_05935 PF01227 GTP cyclohydrolase I XFFB_05940 PF00132 Bacterial transferase hexapeptide (six repeats) XFFB_05945 PF00588 SpoU rRNA Methylase family XFFB_05945 PF08032 RNA 2'-O ribose methyltransferase substrate binding XFFB_05965 PF00578 AhpC/TSA family XFFB_05970 PF00925 GTP cyclohydrolase II XFFB_05980 PF00535 Glycosyl transferase family 2 XFFB_05985 PF04932 XFFB_05985 XFFB_05990 PF01381 Helix-turn-helix XFFB_05995 PF11906 XFFB_05995 XFFB_06000 PF02954 Bacterial regulatory protein, Fis family XFFB_06005 PF01063 Aminotransferase class IV XFFB_06010 PF01883 Domain of unknown function DUF59 XFFB_06025 PF07793 XFFB_06025 XFFB_06030 PF07793 XFFB_06030 XFFB_06035 PF00881 Nitroreductase family XFFB_06040 PF00293 NUDIX domain XFFB_06045 PF00557 Metallopeptidase family M24 XFFB_06045 PF05195 Aminopeptidase P, N-terminal domain XFFB_06050 PF03695 Uncharacterised protein family (UPF0149) XFFB_06060 PF05164 Cell division protein ZapA XFFB_06070 PF01812 5-formyltetrahydrofolate cyclo-ligase family XFFB_06075 PF01878 EVE domain XFFB_06080 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) XFFB_06090 PF00999 Sodium/hydrogen exchanger family XFFB_06105 PF00929 Exonuclease XFFB_06105 PF08411 Exonuclease C-terminal XFFB_06110 PF09365 XFFB_06110 XFFB_06115 PF12706 Beta-lactamase superfamily domain XFFB_06120 PF13662 Toprim domain XFFB_06145 PF05016 Plasmid stabilisation system protein XFFB_06175 PF05016 Plasmid stabilisation system protein XFFB_06180 PF01402 Ribbon-helix-helix protein, copG family XFFB_06210 PF04221 RelB antitoxin XFFB_06215 PF00106 short chain dehydrogenase XFFB_06220 PF00873 AcrB/AcrD/AcrF family XFFB_06225 PF16576 XFFB_06225 XFFB_06230 PF00440 Bacterial regulatory proteins, tetR family XFFB_06240 PF07883 Cupin domain XFFB_06250 PF01513 ATP-NAD kinase XFFB_06255 PF05088 XFFB_06255 XFFB_06255 PF12466 XFFB_06255 XFFB_06265 PF16576 XFFB_06265 XFFB_06270 PF00873 AcrB/AcrD/AcrF family XFFB_06275 PF00132 Bacterial transferase hexapeptide (six repeats) XFFB_06280 PF02649 Type I GTP cyclohydrolase folE2 XFFB_06285 PF08241 Methyltransferase domain XFFB_06290 PF05118 Aspartyl/Asparaginyl beta-hydroxylase XFFB_06295 PF02698 DUF218 domain XFFB_06300 PF01134 Glucose inhibited division protein A XFFB_06300 PF13932 GidA associated domain 3 XFFB_06320 PF01381 Helix-turn-helix XFFB_06350 PF13550 XFFB_06350 XFFB_06370 PF05136 XFFB_06370 XFFB_06390 PF05272 XFFB_06390 XFFB_06395 PF01807 CHC2 zinc finger XFFB_06415 PF00717 Peptidase S24-like XFFB_06420 PF13986 XFFB_06420 XFFB_06430 PF00005 ABC transporter XFFB_06430 PF12848 ABC transporter XFFB_06435 PF00593 TonB dependent receptor XFFB_06435 PF07715 TonB-dependent Receptor Plug Domain XFFB_06440 PF01323 DSBA-like thioredoxin domain XFFB_06445 PF00593 TonB dependent receptor XFFB_06445 PF07715 TonB-dependent Receptor Plug Domain XFFB_06455 PF00999 Sodium/hydrogen exchanger family XFFB_06455 PF02254 TrkA-N domain XFFB_06460 PF12849 PBP superfamily domain XFFB_06465 PF00528 Binding-protein-dependent transport system inner membrane component XFFB_06470 PF00528 Binding-protein-dependent transport system inner membrane component XFFB_06475 PF00005 ABC transporter XFFB_06480 PF01895 PhoU domain XFFB_06485 PF00929 Exonuclease XFFB_06490 PF00398 Ribosomal RNA adenine dimethylase XFFB_06495 PF04379 Protein of unknown function (DUF525) XFFB_06500 PF00149 Calcineurin-like phosphoesterase XFFB_06505 PF03583 Secretory lipase XFFB_06510 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family XFFB_06515 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XFFB_06530 PF13672 Protein phosphatase 2C XFFB_06535 PF00929 Exonuclease XFFB_06540 PF00075 RNase H XFFB_06550 PF00753 Metallo-beta-lactamase superfamily XFFB_06550 PF16123 XFFB_06550 XFFB_06555 PF00575 S1 RNA binding domain XFFB_06555 PF09371 Tex-like protein N-terminal domain XFFB_06555 PF12836 Helix-hairpin-helix motif XFFB_06555 PF16921 XFFB_06555 XFFB_06560 PF13432 Tetratricopeptide repeat XFFB_06565 PF01161 Phosphatidylethanolamine-binding protein XFFB_06570 PF00719 Inorganic pyrophosphatase XFFB_06575 PF00085 Thioredoxin XFFB_06575 PF14559 Tetratricopeptide repeat XFFB_06575 PF14561 Tetratricopeptide repeat XFFB_06585 PF00133 tRNA synthetases class I (I, L, M and V) XFFB_06585 PF08264 Anticodon-binding domain of tRNA XFFB_06585 PF13603 Leucyl-tRNA synthetase, Domain 2 XFFB_06595 PF06144 DNA polymerase III, delta subunit XFFB_06600 PF01467 Cytidylyltransferase XFFB_06605 PF02410 Oligomerisation domain XFFB_06620 PF13406 Transglycosylase SLT domain XFFB_06625 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel XFFB_06625 PF05036 Sporulation related domain XFFB_06635 PF13930 DNA/RNA non-specific endonuclease XFFB_06640 PF04591 Protein of unknown function, DUF596 XFFB_06645 PF05590 XFFB_06645 XFFB_06650 PF04591 Protein of unknown function, DUF596 XFFB_06655 PF05590 XFFB_06655 XFFB_06660 PF04591 Protein of unknown function, DUF596 XFFB_06665 PF04830 XFFB_06665 XFFB_06665 PF05590 XFFB_06665 XFFB_06670 PF04591 Protein of unknown function, DUF596 XFFB_06675 PF05590 XFFB_06675 XFFB_06685 PF04591 Protein of unknown function, DUF596 XFFB_06690 PF04830 XFFB_06690 XFFB_06690 PF05590 XFFB_06690 XFFB_06765 PF05930 Prophage CP4-57 regulatory protein (AlpA) XFFB_06770 PF00589 Phage integrase family XFFB_06770 PF13356 Domain of unknown function (DUF4102) XFFB_06780 PF17289 XFFB_06780 XFFB_06800 PF16083 XFFB_06800 XFFB_06805 PF00959 Phage lysozyme XFFB_06810 PF14384 XFFB_06810 XFFB_06815 PF04365 Protein of unknown function (DUF497) XFFB_06835 PF07120 XFFB_06835 XFFB_06840 PF07120 XFFB_06840 XFFB_06850 PF00436 Single-strand binding protein family XFFB_06855 PF13986 XFFB_06855 XFFB_06865 PF00206 Lyase XFFB_06865 PF10415 Fumarase C C-terminus XFFB_06875 PF00206 Lyase XFFB_06875 PF08328 Adenylosuccinate lyase C-terminal XFFB_06880 PF08007 Cupin superfamily protein XFFB_06885 PF00676 Dehydrogenase E1 component XFFB_06885 PF02779 Transketolase, pyrimidine binding domain XFFB_06885 PF16078 XFFB_06885 XFFB_06885 PF16870 XFFB_06885 XFFB_06890 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XFFB_06890 PF00364 Biotin-requiring enzyme XFFB_06890 PF02817 e3 binding domain XFFB_06900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XFFB_06900 PF07992 Pyridine nucleotide-disulphide oxidoreductase XFFB_06905 PF05433 XFFB_06905 XFFB_06910 PF00899 ThiF family XFFB_06925 PF10439 XFFB_06925 XFFB_06930 PF00027 Cyclic nucleotide-binding domain XFFB_06930 PF00325 Bacterial regulatory proteins, crp family XFFB_06935 PF02675 S-adenosylmethionine decarboxylase XFFB_06940 PF03232 XFFB_06940 XFFB_06945 PF00572 Ribosomal protein L13 XFFB_06950 PF00380 Ribosomal protein S9/S16 XFFB_06955 PF00285 Citrate synthase XFFB_06960 PF01197 Ribosomal protein L31 XFFB_06965 PF00814 Glycoprotease family XFFB_06970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XFFB_06970 PF03466 LysR substrate binding domain XFFB_06975 PF07992 Pyridine nucleotide-disulphide oxidoreductase XFFB_06975 PF13192 Thioredoxin domain XFFB_06980 PF00578 AhpC/TSA family XFFB_06990 PF00263 XFFB_06990 XFFB_06990 PF03958 Bacterial type II/III secretion system short domain XFFB_07000 PF10741 XFFB_07000 XFFB_07005 PF05137 XFFB_07005 XFFB_07010 PF03934 Type II secretion system (T2SS), protein K XFFB_07020 PF07963 Prokaryotic N-terminal methylation motif XFFB_07030 PF08334 Type II secretion system (T2SS), protein G XFFB_07035 PF00482 Type II secretion system (T2SS), protein F XFFB_07040 PF00437 Type II/IV secretion system protein XFFB_07040 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XFFB_07045 PF03895 YadA-like C-terminal region XFFB_07045 PF05658 Head domain of trimeric autotransporter adhesin XFFB_07045 PF05662 Coiled stalk of trimeric autotransporter adhesin XFFB_07055 PF03547 XFFB_07055 XFFB_07065 PF05175 Methyltransferase small domain XFFB_07070 PF00561 alpha/beta hydrolase fold XFFB_07075 PF07238 PilZ domain XFFB_07080 PF07793 XFFB_07080 XFFB_07085 PF04055 Radical SAM superfamily XFFB_07085 PF06969 HemN C-terminal domain XFFB_07090 PF01725 Ham1 family XFFB_07100 PF03755 XFFB_07100 XFFB_07100 PF08340 XFFB_07100 XFFB_07105 PF00625 Guanylate kinase XFFB_07110 PF01192 RNA polymerase Rpb6 XFFB_07120 PF01507 Phosphoadenosine phosphosulfate reductase family XFFB_07130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XFFB_07130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XFFB_07135 PF01507 Phosphoadenosine phosphosulfate reductase family XFFB_07145 PF02643 Uncharacterized ACR, COG1430 XFFB_07150 PF13369 XFFB_07150 XFFB_07150 PF13371 Tetratricopeptide repeat XFFB_07155 PF00816 H-NS histone family XFFB_07160 PF01047 MarR family XFFB_07170 PF13899 Thioredoxin-like XFFB_07175 PF01433 Peptidase family M1 XFFB_07175 PF09127 Leukotriene A4 hydrolase, C-terminal XFFB_07180 PF01209 ubiE/COQ5 methyltransferase family XFFB_07185 PF10009 XFFB_07185 XFFB_07190 PF00004 ATPase family associated with various cellular activities (AAA) XFFB_07190 PF07724 AAA domain (Cdc48 subfamily) XFFB_07190 PF10431 C-terminal, D2-small domain, of ClpB protein XFFB_07195 PF00227 Proteasome subunit XFFB_07205 PF04340 Protein of unknown function, DUF484 XFFB_07210 PF01678 Diaminopimelate epimerase XFFB_07215 PF00326 Prolyl oligopeptidase family XFFB_07215 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XFFB_07220 PF00856 SET domain XFFB_07225 PF02082 Transcriptional regulator XFFB_07230 PF01458 Uncharacterized protein family (UPF0051) XFFB_07235 PF00005 ABC transporter XFFB_07245 PF00266 Aminotransferase class-V XFFB_07250 PF00355 Rieske [2Fe-2S] domain XFFB_07255 PF00534 Glycosyl transferases group 1 XFFB_07255 PF13439 Glycosyltransferase Family 4 XFFB_07260 PF01522 Polysaccharide deacetylase XFFB_07265 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XFFB_07265 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XFFB_07265 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XFFB_07265 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XFFB_07270 PF01039 Carboxyl transferase domain XFFB_07275 PF01979 Amidohydrolase family XFFB_07280 PF01380 SIS domain XFFB_07285 PF00356 Bacterial regulatory proteins, lacI family XFFB_07285 PF13377 Periplasmic binding protein-like domain XFFB_07290 PF07690 Major Facilitator Superfamily XFFB_07300 PF02685 Glucokinase XFFB_07310 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase XFFB_07315 PF13561 Enoyl-(Acyl carrier protein) reductase XFFB_07320 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XFFB_07325 PF00072 Response regulator receiver domain XFFB_07325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFFB_07330 PF02537 XFFB_07330 XFFB_07335 PF05496 Holliday junction DNA helicase ruvB N-terminus XFFB_07335 PF12002 MgsA AAA+ ATPase C terminal XFFB_07335 PF16193 XFFB_07335 XFFB_07340 PF03548 Outer membrane lipoprotein carrier protein LolA XFFB_07345 PF01841 Transglutaminase-like superfamily XFFB_07345 PF12969 Domain of Unknown Function with PDB structure (DUF3857) XFFB_07350 PF01580 FtsK/SpoIIIE family XFFB_07350 PF09397 Ftsk gamma domain XFFB_07350 PF13491 XFFB_07350 XFFB_07355 PF07992 Pyridine nucleotide-disulphide oxidoreductase XFFB_07360 PF04339 XFFB_07360 XFFB_07365 PF03588 Leucyl/phenylalanyl-tRNA protein transferase XFFB_07370 PF01176 Translation initiation factor 1A / IF-1 XFFB_07375 PF00004 ATPase family associated with various cellular activities (AAA) XFFB_07375 PF02861 Clp amino terminal domain XFFB_07375 PF07724 AAA domain (Cdc48 subfamily) XFFB_07375 PF10431 C-terminal, D2-small domain, of ClpB protein XFFB_07380 PF02617 ATP-dependent Clp protease adaptor protein ClpS XFFB_07395 PF04356 Protein of unknown function (DUF489) XFFB_07400 PF03372 Endonuclease/Exonuclease/phosphatase family XFFB_07405 PF01323 DSBA-like thioredoxin domain XFFB_07410 PF13462 Thioredoxin XFFB_07425 PF01926 50S ribosome-binding GTPase XFFB_07430 PF04107 Glutamate-cysteine ligase family 2(GCS2) XFFB_07435 PF00202 Aminotransferase class-III XFFB_07440 PF00520 Ion transport protein XFFB_07445 PF00589 Phage integrase family XFFB_07445 PF02899 Phage integrase, N-terminal SAM-like domain XFFB_07450 PF10411 Disulfide bond isomerase protein N-terminus XFFB_07450 PF13098 Thioredoxin-like domain XFFB_07465 PF13986 XFFB_07465 XFFB_07470 PF00132 Bacterial transferase hexapeptide (six repeats) XFFB_07490 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XFFB_07495 PF01722 BolA-like protein XFFB_07500 PF00571 CBS domain XFFB_07500 PF01380 SIS domain XFFB_07505 PF08282 haloacid dehalogenase-like hydrolase XFFB_07510 PF06835 Lipopolysaccharide-assembly, LptC-related XFFB_07515 PF03968 OstA-like protein XFFB_07520 PF00005 ABC transporter XFFB_07520 PF12399 Branched-chain amino acid ATP-binding cassette transporter XFFB_07525 PF00309 XFFB_07525 XFFB_07525 PF04552 Sigma-54, DNA binding domain XFFB_07525 PF04963 Sigma-54 factor, core binding domain XFFB_07530 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XFFB_07535 PF02603 HPr Serine kinase N terminus XFFB_07535 PF07475 HPr Serine kinase C-terminal domain XFFB_07540 PF03668 XFFB_07540 XFFB_07545 PF03610 PTS system fructose IIA component XFFB_07550 PF00381 PTS HPr component phosphorylation site XFFB_07555 PF00391 PEP-utilising enzyme, mobile domain XFFB_07555 PF02896 PEP-utilising enzyme, TIM barrel domain XFFB_07555 PF05524 PEP-utilising enzyme, N-terminal XFFB_07565 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XFFB_07575 PF13649 Methyltransferase domain XFFB_07580 PF00436 Single-strand binding protein family XFFB_07585 PF00348 Polyprenyl synthetase XFFB_07590 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XFFB_07590 PF06481 COX Aromatic Rich Motif XFFB_07595 PF00115 Cytochrome C and Quinol oxidase polypeptide I XFFB_07600 PF00510 Cytochrome c oxidase subunit III XFFB_07605 PF03626 XFFB_07605 XFFB_07610 PF02347 Glycine cleavage system P-protein XFFB_07620 PF10142 PhoPQ-activated pathogenicity-related protein XFFB_07630 PF00210 Ferritin-like domain XFFB_07635 PF00270 DEAD/DEAH box helicase XFFB_07635 PF00271 Helicase conserved C-terminal domain XFFB_07635 PF00570 HRDC domain XFFB_07635 PF09382 RQC domain XFFB_07635 PF16124 XFFB_07635 XFFB_07645 PF00296 Luciferase-like monooxygenase XFFB_07650 PF13481 AAA domain XFFB_07650 PF13541 Subunit ChlI of Mg-chelatase XFFB_07655 PF00290 Tryptophan synthase alpha chain XFFB_07660 PF00291 Pyridoxal-phosphate dependent enzyme XFFB_07665 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase XFFB_07670 PF01416 tRNA pseudouridine synthase XFFB_07680 PF01118 Semialdehyde dehydrogenase, NAD binding domain XFFB_07680 PF02774 Semialdehyde dehydrogenase, dimerisation domain XFFB_07685 PF01264 Chorismate synthase XFFB_07690 PF05175 Methyltransferase small domain XFFB_07700 PF02666 XFFB_07700 XFFB_07710 PF01464 Transglycosylase SLT domain XFFB_07710 PF14718 Soluble lytic murein transglycosylase L domain XFFB_07715 PF01743 Poly A polymerase head domain XFFB_07715 PF01966 HD domain XFFB_07715 PF12627 Probable RNA and SrmB- binding site of polymerase A XFFB_07725 PF01040 UbiA prenyltransferase family XFFB_07730 PF02628 XFFB_07730 XFFB_07735 PF00155 Aminotransferase class I and II XFFB_07740 PF12697 Alpha/beta hydrolase family XFFB_07750 PF01047 MarR family XFFB_07755 PF00521 DNA gyrase/topoisomerase IV, subunit A XFFB_07755 PF03989 DNA gyrase C-terminal domain, beta-propeller XFFB_07760 PF00140 Sigma-70 factor, region 1 XFFB_07760 PF03979 Sigma-70 factor, region 1 XFFB_07760 PF04539 Sigma-70 region 3 XFFB_07760 PF04542 Sigma-70 region 2 XFFB_07760 PF04545 Sigma-70, region 4 XFFB_07760 PF04546 Sigma-70, non-essential region XFFB_07765 PF03279 XFFB_07765 XFFB_07770 PF00005 ABC transporter XFFB_07770 PF12857 XFFB_07770 XFFB_07775 PF00528 Binding-protein-dependent transport system inner membrane component XFFB_07780 PF00528 Binding-protein-dependent transport system inner membrane component XFFB_07785 PF13531 Bacterial extracellular solute-binding protein XFFB_07805 PF00749 tRNA synthetases class I (E and Q), catalytic domain XFFB_07805 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain XFFB_07810 PF01243 Pyridoxamine 5'-phosphate oxidase XFFB_07810 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region XFFB_07820 PF01202 Shikimate kinase XFFB_07825 PF01761 3-dehydroquinate synthase XFFB_07830 PF01208 Uroporphyrinogen decarboxylase (URO-D) XFFB_07835 PF00072 Response regulator receiver domain XFFB_07835 PF00512 His Kinase A (phospho-acceptor) domain XFFB_07835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFFB_07835 PF07494 Two component regulator propeller XFFB_07835 PF07495 Y_Y_Y domain XFFB_07840 PF04264 YceI-like domain XFFB_07845 PF01292 Prokaryotic cytochrome b561 XFFB_07850 PF04264 YceI-like domain XFFB_07855 PF00730 HhH-GPD superfamily base excision DNA repair protein XFFB_07870 PF00583 Acetyltransferase (GNAT) family XFFB_07875 PF03775 Septum formation inhibitor MinC, C-terminal domain XFFB_07875 PF05209 Septum formation inhibitor MinC, N-terminal domain XFFB_07880 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XFFB_07885 PF03776 Septum formation topological specificity factor MinE XFFB_07900 PF02824 TGS domain XFFB_07900 PF04607 Region found in RelA / SpoT proteins XFFB_07900 PF13291 ACT domain XFFB_07900 PF13328 HD domain XFFB_07905 PF02547 Queuosine biosynthesis protein XFFB_07910 PF01098 XFFB_07910 XFFB_07915 PF00905 Penicillin binding protein transpeptidase domain XFFB_07915 PF03717 Penicillin-binding Protein dimerisation domain XFFB_07920 PF04093 XFFB_07920 XFFB_07930 PF06723 MreB/Mbl protein XFFB_07965 PF06738 XFFB_07965 XFFB_07965 PF12821 XFFB_07965 XFFB_07970 PF02405 XFFB_07970 XFFB_07975 PF00005 ABC transporter XFFB_07980 PF02470 XFFB_07980 XFFB_07985 PF03886 Protein of unknown function (DUF330) XFFB_07990 PF13532 2OG-Fe(II) oxygenase superfamily XFFB_07995 PF01946 Thi4 family XFFB_07995 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase XFFB_08000 PF08450 SMP-30/Gluconolaconase/LRE-like region XFFB_08005 PF01713 Smr domain XFFB_08010 PF02542 YgbB family XFFB_08015 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase XFFB_08020 PF04977 Septum formation initiator XFFB_08025 PF00113 Enolase, C-terminal TIM barrel domain XFFB_08025 PF03952 Enolase, N-terminal domain XFFB_08030 PF00793 DAHP synthetase I family XFFB_08035 PF00117 Glutamine amidotransferase class-I XFFB_08035 PF06418 CTP synthase N-terminus XFFB_08045 PF00204 DNA gyrase B XFFB_08045 PF00986 DNA gyrase B subunit, carboxyl terminus XFFB_08045 PF01751 Toprim domain XFFB_08045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFFB_08060 PF00450 Serine carboxypeptidase XFFB_08065 PF00571 CBS domain XFFB_08065 PF01595 XFFB_08065 XFFB_08065 PF03471 Transporter associated domain XFFB_08070 PF04286 XFFB_08070 XFFB_08075 PF05597 XFFB_08075 XFFB_08085 PF16697 XFFB_08085 XFFB_08090 PF04359 Protein of unknown function (DUF493) XFFB_08095 PF03099 Biotin/lipoate A/B protein ligase family XFFB_08100 PF04055 Radical SAM superfamily XFFB_08100 PF16881 XFFB_08100 XFFB_08105 PF00553 Cellulose binding domain XFFB_08105 PF01341 Glycosyl hydrolases family 6 XFFB_08110 PF03797 Autotransporter beta-domain XFFB_08120 PF06853 XFFB_08120 XFFB_08125 PF03618 XFFB_08125 XFFB_08130 PF00391 PEP-utilising enzyme, mobile domain XFFB_08130 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain XFFB_08130 PF02896 PEP-utilising enzyme, TIM barrel domain XFFB_08135 PF00924 Mechanosensitive ion channel XFFB_08140 PF00929 Exonuclease XFFB_08150 PF12833 Helix-turn-helix domain XFFB_08150 PF12852 Cupin XFFB_08155 PF07859 alpha/beta hydrolase fold XFFB_08160 PF00207 Alpha-2-macroglobulin family XFFB_08160 PF01835 MG2 domain XFFB_08160 PF07703 Alpha-2-macroglobulin family N-terminal region XFFB_08160 PF11974 Alpha-2-macroglobulin MG1 domain XFFB_08165 PF00491 Arginase family XFFB_08185 PF04303 PrpF protein XFFB_08190 PF00330 Aconitase family (aconitate hydratase) XFFB_08190 PF00694 Aconitase C-terminal domain XFFB_08245 PF02486 XFFB_08245 XFFB_08260 PF10389 Bacteriophage coat protein B XFFB_08270 PF10734 XFFB_08270 XFFB_08275 PF05707 Zonular occludens toxin (Zot) XFFB_08290 PF00589 Phage integrase family XFFB_08300 PF13714 Phosphoenolpyruvate phosphomutase XFFB_08305 PF04357 XFFB_08305 XFFB_08310 PF01103 Surface antigen XFFB_08310 PF07244 Surface antigen variable number repeat XFFB_08310 PF17243 XFFB_08310 XFFB_08315 PF13185 GAF domain XFFB_08320 PF00271 Helicase conserved C-terminal domain XFFB_08320 PF04408 Helicase associated domain (HA2) XFFB_08320 PF08482 XFFB_08320 XFFB_08335 PF05567 Neisseria PilC beta-propeller domain XFFB_08340 PF00005 ABC transporter XFFB_08345 PF01061 XFFB_08345 XFFB_08350 PF00005 ABC transporter XFFB_08350 PF00664 ABC transporter transmembrane region XFFB_08350 PF03412 Peptidase C39 family XFFB_08360 PF13437 HlyD family secretion protein XFFB_08365 PF09900 XFFB_08365 XFFB_08375 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XFFB_08380 PF00056 lactate/malate dehydrogenase, NAD binding domain XFFB_08380 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XFFB_08385 PF00043 Glutathione S-transferase, C-terminal domain XFFB_08385 PF02798 Glutathione S-transferase, N-terminal domain XFFB_08390 PF13091 PLD-like domain XFFB_08395 PF00471 Ribosomal protein L33 XFFB_08400 PF00830 Ribosomal L28 family XFFB_08405 PF07209 XFFB_08405 XFFB_08410 PF13419 Haloacid dehalogenase-like hydrolase XFFB_08415 PF00849 RNA pseudouridylate synthase XFFB_08420 PF00085 Thioredoxin XFFB_08425 PF00258 Flavodoxin XFFB_08430 PF00268 Ribonucleotide reductase, small chain XFFB_08435 PF00317 Ribonucleotide reductase, all-alpha domain XFFB_08435 PF02867 Ribonucleotide reductase, barrel domain XFFB_08445 PF04332 XFFB_08445 XFFB_08450 PF13616 PPIC-type PPIASE domain XFFB_08450 PF13623 XFFB_08450 XFFB_08465 PF00216 Bacterial DNA-binding protein XFFB_08470 PF00004 ATPase family associated with various cellular activities (AAA) XFFB_08470 PF02190 ATP-dependent protease La (LON) domain XFFB_08470 PF05362 Lon protease (S16) C-terminal proteolytic domain XFFB_08475 PF06689 ClpX C4-type zinc finger XFFB_08475 PF07724 AAA domain (Cdc48 subfamily) XFFB_08475 PF10431 C-terminal, D2-small domain, of ClpB protein XFFB_08480 PF00574 Clp protease XFFB_08485 PF05697 Bacterial trigger factor protein (TF) XFFB_08485 PF05698 Bacterial trigger factor protein (TF) C-terminus XFFB_08500 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XFFB_08500 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XFFB_08500 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XFFB_08510 PF03280 Proteobacterial lipase chaperone protein XFFB_08515 PF00561 alpha/beta hydrolase fold XFFB_08520 PF01078 Magnesium chelatase, subunit ChlI XFFB_08520 PF13335 XFFB_08520 XFFB_08520 PF13541 Subunit ChlI of Mg-chelatase XFFB_08525 PF04380 XFFB_08525 XFFB_08530 PF01196 Ribosomal protein L17 XFFB_08535 PF01000 RNA polymerase Rpb3/RpoA insert domain XFFB_08535 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain XFFB_08535 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain XFFB_08540 PF00163 Ribosomal protein S4/S9 N-terminal domain XFFB_08540 PF01479 S4 domain XFFB_08545 PF00411 Ribosomal protein S11 XFFB_08550 PF00416 Ribosomal protein S13/S18 XFFB_08555 PF00344 SecY translocase XFFB_08560 PF00828 Ribosomal protein L18e/L15 XFFB_08565 PF00333 Ribosomal protein S5, N-terminal domain XFFB_08565 PF03719 Ribosomal protein S5, C-terminal domain XFFB_08570 PF00861 Ribosomal L18p/L5e family XFFB_08575 PF00347 Ribosomal protein L6 XFFB_08580 PF00410 Ribosomal protein S8 XFFB_08585 PF00253 Ribosomal protein S14p/S29e XFFB_08590 PF00281 Ribosomal protein L5 XFFB_08590 PF00673 ribosomal L5P family C-terminus XFFB_08595 PF00467 KOW motif XFFB_08595 PF17136 XFFB_08595 XFFB_08600 PF00238 Ribosomal protein L14p/L23e XFFB_08605 PF00366 Ribosomal protein S17 XFFB_08610 PF00831 Ribosomal L29 protein XFFB_08615 PF00252 Ribosomal protein L16p/L10e XFFB_08620 PF00189 Ribosomal protein S3, C-terminal domain XFFB_08620 PF07650 KH domain XFFB_08625 PF00237 Ribosomal protein L22p/L17e XFFB_08635 PF00181 Ribosomal Proteins L2, RNA binding domain XFFB_08635 PF03947 Ribosomal Proteins L2, C-terminal domain XFFB_08640 PF00276 Ribosomal protein L23 XFFB_08645 PF00573 Ribosomal protein L4/L1 family XFFB_08650 PF00297 Ribosomal protein L3 XFFB_08655 PF00338 Ribosomal protein S10p/S20e XFFB_08660 PF00119 ATP synthase A chain XFFB_08665 PF00137 ATP synthase subunit C XFFB_08670 PF00430 ATP synthase B/B' CF(0) XFFB_08675 PF00213 ATP synthase delta (OSCP) subunit XFFB_08680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XFFB_08680 PF00306 ATP synthase alpha/beta chain, C terminal domain XFFB_08680 PF02874 ATP synthase alpha/beta family, beta-barrel domain XFFB_08685 PF00231 ATP synthase XFFB_08690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XFFB_08690 PF02874 ATP synthase alpha/beta family, beta-barrel domain XFFB_08695 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain XFFB_08695 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain XFFB_08700 PF01817 Chorismate mutase type II XFFB_08705 PF00132 Bacterial transferase hexapeptide (six repeats) XFFB_08705 PF12804 MobA-like NTP transferase domain XFFB_08715 PF01965 DJ-1/PfpI family XFFB_08720 PF00107 Zinc-binding dehydrogenase XFFB_08720 PF08240 Alcohol dehydrogenase GroES-like domain XFFB_08730 PF03358 NADPH-dependent FMN reductase XFFB_08735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XFFB_08735 PF03466 LysR substrate binding domain XFFB_08745 PF04751 Protein of unknown function (DUF615) XFFB_08750 PF01523 Putative modulator of DNA gyrase XFFB_08755 PF13116 XFFB_08755 XFFB_08755 PF13502 XFFB_08755 XFFB_08760 PF00575 S1 RNA binding domain XFFB_08760 PF10150 Ribonuclease E/G family XFFB_08765 PF02545 Maf-like protein XFFB_08770 PF04402 Protein of unknown function (DUF541) XFFB_08775 PF02219 Methylenetetrahydrofolate reductase XFFB_08780 PF00293 NUDIX domain XFFB_08780 PF02581 Thiamine monophosphate synthase/TENI XFFB_08800 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain XFFB_08800 PF00696 Amino acid kinase family XFFB_08800 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XFFB_08805 PF00378 Enoyl-CoA hydratase/isomerase family XFFB_08815 PF00072 Response regulator receiver domain XFFB_08815 PF13487 HD domain XFFB_08825 PF00472 RF-1 domain XFFB_08825 PF03462 PCRF domain XFFB_08830 PF01368 DHH family XFFB_08830 PF02272 DHHA1 domain XFFB_08840 PF01272 Transcription elongation factor, GreA/GreB, C-term XFFB_08840 PF03449 Transcription elongation factor, N-terminal XFFB_08850 PF00117 Glutamine amidotransferase class-I XFFB_08850 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain XFFB_08855 PF01113 Dihydrodipicolinate reductase, N-terminus XFFB_08855 PF05173 Dihydrodipicolinate reductase, C-terminus XFFB_08865 PF00476 DNA polymerase family A XFFB_08865 PF01367 5'-3' exonuclease, C-terminal SAM fold XFFB_08865 PF01612 3'-5' exonuclease XFFB_08865 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XFFB_08870 PF11191 Protein of unknown function (DUF2782) XFFB_08880 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family XFFB_08885 PF03358 NADPH-dependent FMN reductase XFFB_08890 PF00710 Asparaginase XFFB_08895 PF13091 PLD-like domain XFFB_08900 PF04264 YceI-like domain XFFB_08905 PF00300 Histidine phosphatase superfamily (branch 1) XFFB_08910 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XFFB_08915 PF02606 Tetraacyldisaccharide-1-P 4'-kinase XFFB_08920 PF00005 ABC transporter XFFB_08920 PF00664 ABC transporter transmembrane region XFFB_08925 PF02472 Biopolymer transport protein ExbD/TolR XFFB_08930 PF01618 XFFB_08930 XFFB_08940 PF00005 ABC transporter XFFB_08945 PF02687 XFFB_08945 XFFB_08945 PF12704 MacB-like periplasmic core domain XFFB_08955 PF03937 Flavinator of succinate dehydrogenase XFFB_08960 PF13085 2Fe-2S iron-sulfur cluster binding domain XFFB_08960 PF13534 4Fe-4S dicluster domain XFFB_08965 PF00890 FAD binding domain XFFB_08965 PF02910 Fumarate reductase flavoprotein C-term XFFB_08970 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XFFB_08975 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XFFB_08980 PF07896 Protein of unknown function (DUF1674) XFFB_08985 PF08669 Glycine cleavage T-protein C-terminal barrel domain XFFB_08990 PF00005 ABC transporter XFFB_08990 PF08402 TOBE domain XFFB_08995 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XFFB_08995 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XFFB_09000 PF02685 Glucokinase XFFB_09005 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase XFFB_09010 PF00920 Dehydratase family XFFB_09015 PF01081 KDPG and KHG aldolase XFFB_09040 PF00696 Amino acid kinase family XFFB_09050 PF08850 XFFB_09050 XFFB_09055 PF01694 Rhomboid family XFFB_09065 PF01765 Ribosome recycling factor XFFB_09070 PF01255 Putative undecaprenyl diphosphate synthase XFFB_09075 PF01148 Cytidylyltransferase family XFFB_09080 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase XFFB_09080 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal XFFB_09080 PF13288 DXP reductoisomerase C-terminal domain XFFB_09085 PF02163 Peptidase family M50 XFFB_09090 PF01103 Surface antigen XFFB_09090 PF07244 Surface antigen variable number repeat XFFB_09095 PF00132 Bacterial transferase hexapeptide (six repeats) XFFB_09095 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD XFFB_09095 PF14602 Hexapeptide repeat of succinyl-transferase XFFB_09100 PF07977 FabA-like domain XFFB_09105 PF00132 Bacterial transferase hexapeptide (six repeats) XFFB_09105 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 XFFB_09110 PF02684 XFFB_09110 XFFB_09115 PF01351 Ribonuclease HII XFFB_09120 PF00501 AMP-binding enzyme XFFB_09125 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XFFB_09125 PF05221 S-adenosyl-L-homocysteine hydrolase XFFB_09130 PF00593 TonB dependent receptor XFFB_09140 PF01553 Acyltransferase XFFB_09165 PF13622 Thioesterase-like superfamily XFFB_09175 PF04376 XFFB_09175 XFFB_09175 PF04377 XFFB_09175 XFFB_09180 PF01566 XFFB_09180 XFFB_09185 PF01325 Iron dependent repressor, N-terminal DNA binding domain XFFB_09185 PF02742 Iron dependent repressor, metal binding and dimerisation domain XFFB_09190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XFFB_09195 PF00353 Hemolysin-type calcium-binding repeat (2 copies) XFFB_09195 PF06594 XFFB_09195 XFFB_09240 PF00171 Aldehyde dehydrogenase family XFFB_09245 PF00696 Amino acid kinase family XFFB_09245 PF01472 PUA domain XFFB_09250 PF00206 Lyase XFFB_09260 PF00696 Amino acid kinase family XFFB_09260 PF04768 Protein of unknown function (DUF619) XFFB_09270 PF00764 Arginosuccinate synthase XFFB_09275 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XFFB_09275 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XFFB_09290 PF02657 Fe-S metabolism associated domain XFFB_09295 PF05977 Transmembrane secretion effector XFFB_09300 PF12146 Putative lysophospholipase XFFB_09305 PF01258 Prokaryotic dksA/traR C4-type zinc finger XFFB_09310 PF01809 XFFB_09310 XFFB_09315 PF01979 Amidohydrolase family XFFB_09320 PF01551 Peptidase family M23 XFFB_09325 PF00990 GGDEF domain XFFB_09325 PF07695 XFFB_09325 XFFB_09325 PF07696 7TMR-DISM extracellular 2 XFFB_09330 PF01019 Gamma-glutamyltranspeptidase XFFB_09335 PF00037 4Fe-4S binding domain XFFB_09345 PF01467 Cytidylyltransferase XFFB_09350 PF03602 Conserved hypothetical protein 95 XFFB_09355 PF00183 Hsp90 protein XFFB_09355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFFB_09360 PF00390 Malic enzyme, N-terminal domain XFFB_09360 PF01515 Phosphate acetyl/butaryl transferase XFFB_09360 PF03949 Malic enzyme, NAD binding domain XFFB_09365 PF00375 Sodium:dicarboxylate symporter family XFFB_09370 PF07396 Phosphate-selective porin O and P XFFB_09380 PF00072 Response regulator receiver domain XFFB_09380 PF00512 His Kinase A (phospho-acceptor) domain XFFB_09380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFFB_09380 PF12860 XFFB_09380 XFFB_09385 PF00072 Response regulator receiver domain XFFB_09385 PF00196 Bacterial regulatory proteins, luxR family XFFB_09405 PF01381 Helix-turn-helix XFFB_09410 PF13274 XFFB_09410 XFFB_09430 PF07484 Phage Tail Collar Domain XFFB_09470 PF05973 XFFB_09470 XFFB_09475 PF13744 Helix-turn-helix domain XFFB_09485 PF10876 XFFB_09485 XFFB_09490 PF11681 XFFB_09490 XFFB_09495 PF11863 XFFB_09495 XFFB_09515 PF13262 XFFB_09515 XFFB_09525 PF09950 XFFB_09525 XFFB_09535 PF09979 XFFB_09535 XFFB_09545 PF06381 XFFB_09545 XFFB_09550 PF17289 XFFB_09550 XFFB_09570 PF16083 XFFB_09570 XFFB_09575 PF00959 Phage lysozyme XFFB_09580 PF05015 Plasmid maintenance system killer protein XFFB_09585 PF01381 Helix-turn-helix XFFB_09610 PF07120 XFFB_09610 XFFB_09615 PF02498 XFFB_09615 XFFB_09620 PF02498 XFFB_09620 XFFB_09650 PF07022 Bacteriophage CI repressor helix-turn-helix domain XFFB_09655 PF00717 Peptidase S24-like XFFB_09655 PF13560 Helix-turn-helix domain XFFB_09665 PF01909 Nucleotidyltransferase domain XFFB_09670 PF01934 Protein of unknown function DUF86 XFFB_09690 PF07603 XFFB_09690 XFFB_09715 PF10065 XFFB_09715 XFFB_09720 PF03837 XFFB_09720 XFFB_09725 PF09588 YqaJ-like viral recombinase domain XFFB_09730 PF02498 XFFB_09730 XFFB_09740 PF02498 XFFB_09740 XFFB_09745 PF03374 XFFB_09745 XFFB_09745 PF09669 XFFB_09745 XFFB_09750 PF00436 Single-strand binding protein family XFFB_09755 PF12728 Helix-turn-helix domain XFFB_09765 PF00271 Helicase conserved C-terminal domain XFFB_09765 PF02151 UvrB/uvrC motif XFFB_09765 PF04851 Type III restriction enzyme, res subunit XFFB_09765 PF12344 Ultra-violet resistance protein B XFFB_09770 PF07963 Prokaryotic N-terminal methylation motif XFFB_09770 PF12019 Type II transport protein GspH XFFB_09780 PF00701 Dihydrodipicolinate synthetase family XFFB_09785 PF13740 ACT domain XFFB_09790 PF00578 AhpC/TSA family XFFB_09815 PF01029 NusB family XFFB_09820 PF00885 6,7-dimethyl-8-ribityllumazine synthase XFFB_09825 PF00925 GTP cyclohydrolase II XFFB_09825 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase XFFB_09830 PF00677 Lumazine binding domain XFFB_09835 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XFFB_09835 PF01872 RibD C-terminal domain XFFB_09840 PF03477 ATP cone domain XFFB_09850 PF00464 Serine hydroxymethyltransferase XFFB_09855 PF00005 ABC transporter XFFB_09855 PF12848 ABC transporter XFFB_09860 PF06039 XFFB_09860 XFFB_09865 PF04134 XFFB_09865 XFFB_09875 PF00849 RNA pseudouridylate synthase XFFB_09875 PF01479 S4 domain XFFB_09880 PF13525 Outer membrane lipoprotein XFFB_09885 PF09566 XFFB_09885 XFFB_09890 PF02086 D12 class N6 adenine-specific DNA methyltransferase XFFB_09900 PF02421 Ferrous iron transport protein B XFFB_09900 PF07664 XFFB_09900 XFFB_09900 PF07670 Nucleoside recognition XFFB_09905 PF04023 FeoA domain XFFB_09915 PF13231 XFFB_09915 XFFB_09920 PF01029 NusB family XFFB_09920 PF01189 NOL1/NOP2/sun family XFFB_09925 PF00551 Formyl transferase XFFB_09925 PF02911 Formyl transferase, C-terminal domain XFFB_09930 PF01327 Polypeptide deformylase XFFB_09935 PF01476 LysM domain XFFB_09940 PF02481 DNA recombination-mediator protein A XFFB_09945 PF04361 XFFB_09945 XFFB_09950 PF01131 DNA topoisomerase XFFB_09950 PF01751 Toprim domain XFFB_09950 PF13368 XFFB_09950 XFFB_09955 PF01300 Telomere recombination XFFB_09960 PF00132 Bacterial transferase hexapeptide (six repeats) XFFB_09980 PF01381 Helix-turn-helix XFFB_09985 PF13561 Enoyl-(Acyl carrier protein) reductase XFFB_09990 PF04386 Stringent starvation protein B XFFB_09995 PF00043 Glutathione S-transferase, C-terminal domain XFFB_09995 PF02798 Glutathione S-transferase, N-terminal domain XFFB_10000 PF02167 Cytochrome C1 family XFFB_10005 PF00032 Cytochrome b(C-terminal)/b6/petD XFFB_10005 PF00033 Cytochrome b(N-terminal)/b6/petB XFFB_10010 PF00355 Rieske [2Fe-2S] domain XFFB_10010 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal XFFB_10020 PF00919 Uncharacterized protein family UPF0004 XFFB_10020 PF01938 TRAM domain XFFB_10020 PF04055 Radical SAM superfamily XFFB_10025 PF02562 PhoH-like protein XFFB_10030 PF02130 Uncharacterized protein family UPF0054 XFFB_10040 PF00571 CBS domain XFFB_10040 PF03471 Transporter associated domain XFFB_10045 PF13387 XFFB_10045 XFFB_10050 PF01544 CorA-like Mg2+ transporter protein XFFB_10065 PF13332 XFFB_10065 XFFB_10075 PF05590 XFFB_10075 XFFB_10125 PF00534 Glycosyl transferases group 1 XFFB_10125 PF13439 Glycosyltransferase Family 4 XFFB_10135 PF13692 Glycosyl transferases group 1 XFFB_10140 PF00905 Penicillin binding protein transpeptidase domain XFFB_10140 PF00912 Transglycosylase XFFB_10140 PF14814 Bifunctional transglycosylase second domain XFFB_10155 PF02557 D-alanyl-D-alanine carboxypeptidase XFFB_10160 PF00484 Carbonic anhydrase XFFB_10165 PF13439 Glycosyltransferase Family 4 XFFB_10165 PF13692 Glycosyl transferases group 1 XFFB_10170 PF01522 Polysaccharide deacetylase XFFB_10175 PF00005 ABC transporter XFFB_10175 PF09383 NIL domain XFFB_10180 PF00528 Binding-protein-dependent transport system inner membrane component XFFB_10185 PF03180 NLPA lipoprotein XFFB_10190 PF03922 OmpW family XFFB_10195 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XFFB_10195 PF00364 Biotin-requiring enzyme XFFB_10195 PF02817 e3 binding domain XFFB_10200 PF00364 Biotin-requiring enzyme XFFB_10200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XFFB_10200 PF07992 Pyridine nucleotide-disulphide oxidoreductase XFFB_10210 PF01545 Cation efflux family XFFB_10215 PF01053 Cys/Met metabolism PLP-dependent enzyme XFFB_10220 PF00561 alpha/beta hydrolase fold XFFB_10225 PF01551 Peptidase family M23 XFFB_10230 PF01975 Survival protein SurE XFFB_10235 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) XFFB_10240 PF09335 XFFB_10240 XFFB_10245 PF01476 LysM domain XFFB_10245 PF01551 Peptidase family M23 XFFB_10255 PF00512 His Kinase A (phospho-acceptor) domain XFFB_10255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFFB_10255 PF08448 PAS fold XFFB_10260 PF00842 Alanine racemase, C-terminal domain XFFB_10260 PF01168 Alanine racemase, N-terminal domain XFFB_10265 PF01266 FAD dependent oxidoreductase XFFB_10270 PF01641 SelR domain XFFB_10275 PF00704 Glycosyl hydrolases family 18 XFFB_10285 PF00703 Glycosyl hydrolases family 2 XFFB_10290 PF00933 Glycosyl hydrolase family 3 N terminal domain XFFB_10290 PF01915 Glycosyl hydrolase family 3 C-terminal domain XFFB_10290 PF07691 PA14 domain XFFB_10290 PF14310 Fibronectin type III-like domain XFFB_10300 PF06824 Protein of unknown function (DUF1237) XFFB_10310 PF01301 Glycosyl hydrolases family 35 XFFB_10315 PF04166 Pyridoxal phosphate biosynthetic protein PdxA XFFB_10320 PF00639 PPIC-type PPIASE domain XFFB_10320 PF09312 SurA N-terminal domain XFFB_10335 PF01494 FAD binding domain XFFB_10340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XFFB_10340 PF03466 LysR substrate binding domain XFFB_10350 PF00291 Pyridoxal-phosphate dependent enzyme XFFB_10375 PF00274 Fructose-bisphosphate aldolase class-I XFFB_10380 PF00224 Pyruvate kinase, barrel domain XFFB_10380 PF02887 Pyruvate kinase, alpha/beta domain XFFB_10385 PF00162 Phosphoglycerate kinase XFFB_10390 PF00749 tRNA synthetases class I (E and Q), catalytic domain XFFB_10395 PF01475 Ferric uptake regulator family XFFB_10400 PF02225 PA domain XFFB_10400 PF04389 Peptidase family M28 XFFB_10410 PF00675 Insulinase (Peptidase family M16) XFFB_10410 PF05193 Peptidase M16 inactive domain XFFB_10415 PF09849 XFFB_10415 XFFB_10425 PF00150 Cellulase (glycosyl hydrolase family 5) XFFB_10425 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel XFFB_10430 PF01043 SecA preprotein cross-linking domain XFFB_10430 PF02810 SEC-C motif XFFB_10430 PF07516 SecA Wing and Scaffold domain XFFB_10430 PF07517 SecA DEAD-like domain XFFB_10435 PF01551 Peptidase family M23 XFFB_10440 PF05258 XFFB_10440 XFFB_10445 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase XFFB_10450 PF00091 Tubulin/FtsZ family, GTPase domain XFFB_10450 PF12327 FtsZ family, C-terminal domain XFFB_10455 PF02491 SHS2 domain inserted in FTSA XFFB_10455 PF14450 Cell division protein FtsA XFFB_10460 PF03799 Cell division protein FtsQ XFFB_10460 PF08478 POTRA domain, FtsQ-type XFFB_10465 PF01820 D-ala D-ala ligase N-terminus XFFB_10465 PF07478 D-ala D-ala ligase C-terminus XFFB_10470 PF01225 Mur ligase family, catalytic domain XFFB_10470 PF02875 Mur ligase family, glutamate ligase domain XFFB_10470 PF08245 Mur ligase middle domain XFFB_10475 PF03033 Glycosyltransferase family 28 N-terminal domain XFFB_10475 PF04101 Glycosyltransferase family 28 C-terminal domain XFFB_10480 PF01098 XFFB_10480 XFFB_10485 PF00953 Glycosyl transferase family 4 XFFB_10490 PF01225 Mur ligase family, catalytic domain XFFB_10490 PF02875 Mur ligase family, glutamate ligase domain XFFB_10490 PF08245 Mur ligase middle domain XFFB_10495 PF01225 Mur ligase family, catalytic domain XFFB_10495 PF02875 Mur ligase family, glutamate ligase domain XFFB_10495 PF08245 Mur ligase middle domain XFFB_10500 PF00905 Penicillin binding protein transpeptidase domain XFFB_10500 PF03717 Penicillin-binding Protein dimerisation domain XFFB_10505 PF04999 XFFB_10505 XFFB_10510 PF01795 MraW methylase family XFFB_10515 PF02381 MraZ protein XFFB_10525 PF02080 TrkA-C domain XFFB_10525 PF03600 Citrate transporter XFFB_10530 PF02390 Putative methyltransferase XFFB_10535 PF05690 Thiazole biosynthesis protein ThiG XFFB_10540 PF02597 ThiS family XFFB_10545 PF00657 GDSL-like Lipase/Acylhydrolase XFFB_10545 PF03797 Autotransporter beta-domain XFFB_10565 PF01757 XFFB_10565 XFFB_10575 PF03176 MMPL family XFFB_10585 PF03279 XFFB_10585 XFFB_10605 PF00550 Phosphopantetheine attachment site XFFB_10615 PF00753 Metallo-beta-lactamase superfamily XFFB_10615 PF04273 Putative phosphatase (DUF442) XFFB_10620 PF12840 Helix-turn-helix domain XFFB_10625 PF04143 XFFB_10625 XFFB_10635 PF01925 XFFB_10635 XFFB_10640 PF00692 dUTPase XFFB_10645 PF07920 Protein of unknown function (DUF1684) XFFB_10650 PF01119 DNA mismatch repair protein, C-terminal domain XFFB_10650 PF08676 MutL C terminal dimerisation domain XFFB_10650 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFFB_10660 PF02367 Uncharacterised P-loop hydrolase UPF0079 XFFB_10675 PF02601 XFFB_10675 XFFB_10675 PF13742 XFFB_10675 XFFB_10680 PF06057 Bacterial virulence protein (VirJ) XFFB_10685 PF03781 Sulfatase-modifying factor enzyme 1 XFFB_10690 PF00570 HRDC domain XFFB_10690 PF01612 3'-5' exonuclease XFFB_10695 PF00816 H-NS histone family XFFB_10700 PF01728 FtsJ-like methyltransferase XFFB_10710 PF13411 MerR HTH family regulatory protein XFFB_10715 PF00216 Bacterial DNA-binding protein XFFB_10720 PF01588 Putative tRNA binding domain XFFB_10720 PF03147 Ferredoxin-fold anticodon binding domain XFFB_10720 PF03483 B3/4 domain XFFB_10720 PF03484 tRNA synthetase B5 domain XFFB_10725 PF01409 tRNA synthetases class II core domain (F) XFFB_10725 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain XFFB_10730 PF00453 Ribosomal protein L20 XFFB_10735 PF01632 Ribosomal protein L35 XFFB_10740 PF00707 Translation initiation factor IF-3, C-terminal domain XFFB_10740 PF05198 Translation initiation factor IF-3, N-terminal domain XFFB_10745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XFFB_10745 PF02824 TGS domain XFFB_10745 PF03129 Anticodon binding domain XFFB_10745 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XFFB_10765 PF05489 Phage Tail Protein X XFFB_10770 PF06995 XFFB_10770 XFFB_10780 PF10109 XFFB_10780 XFFB_10785 PF04985 XFFB_10785 XFFB_10790 PF04984 Phage tail sheath protein XFFB_10790 PF17482 XFFB_10790 XFFB_10800 PF09684 XFFB_10800 XFFB_10805 PF04865 XFFB_10805 XFFB_10810 PF04965 Gene 25-like lysozyme XFFB_10815 PF15723 XFFB_10815 XFFB_10820 PF15731 XFFB_10820 XFFB_10825 PF04717 Phage-related baseplate assembly protein XFFB_10850 PF04586 XFFB_10850 XFFB_10850 PF05065 Phage capsid family XFFB_10865 PF05876 XFFB_10865 XFFB_10870 PF07471 Phage DNA packaging protein Nu1 XFFB_10885 PF16083 XFFB_10885 XFFB_10905 PF03288 Poxvirus D5 protein-like XFFB_10905 PF08706 XFFB_10905 XFFB_10910 PF02498 XFFB_10910 XFFB_10945 PF00717 Peptidase S24-like XFFB_10945 PF01381 Helix-turn-helix XFFB_11000 PF10926 XFFB_11000 XFFB_11005 PF10991 Protein of unknown function (DUF2815) XFFB_11010 PF02498 XFFB_11010 XFFB_11015 PF00476 DNA polymerase family A XFFB_11020 PF08774 VRR-NUC domain XFFB_11030 PF00176 SNF2 family N-terminal domain XFFB_11035 PF13986 XFFB_11035 XFFB_11040 PF00589 Phage integrase family XFFB_11055 PF00072 Response regulator receiver domain XFFB_11055 PF00486 Transcriptional regulatory protein, C terminal XFFB_11060 PF00512 His Kinase A (phospho-acceptor) domain XFFB_11060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFFB_11065 PF01121 Dephospho-CoA kinase XFFB_11070 PF01478 Type IV leader peptidase family XFFB_11070 PF06750 XFFB_11070 XFFB_11075 PF00482 Type II secretion system (T2SS), protein F XFFB_11080 PF00114 Pilin (bacterial filament) XFFB_11080 PF07963 Prokaryotic N-terminal methylation motif XFFB_11090 PF00114 Pilin (bacterial filament) XFFB_11090 PF07963 Prokaryotic N-terminal methylation motif XFFB_11095 PF00437 Type II/IV secretion system protein XFFB_11095 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XFFB_11100 PF00072 Response regulator receiver domain XFFB_11100 PF00158 Sigma-54 interaction domain XFFB_11100 PF02954 Bacterial regulatory protein, Fis family XFFB_11105 PF00512 His Kinase A (phospho-acceptor) domain XFFB_11105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFFB_11115 PF00549 CoA-ligase XFFB_11115 PF08442 ATP-grasp domain XFFB_11120 PF00549 CoA-ligase XFFB_11120 PF02629 CoA binding domain XFFB_11130 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB XFFB_11130 PF08479 POTRA domain, ShlB-type XFFB_11130 PF17287 XFFB_11130 XFFB_11140 PF00521 DNA gyrase/topoisomerase IV, subunit A XFFB_11140 PF03989 DNA gyrase C-terminal domain, beta-propeller XFFB_11145 PF01008 Initiation factor 2 subunit family XFFB_11150 PF11218 XFFB_11150 XFFB_11155 PF00152 tRNA synthetases class II (D, K and N) XFFB_11160 PF00583 Acetyltransferase (GNAT) family XFFB_11165 PF00533 BRCA1 C Terminus (BRCT) domain XFFB_11165 PF01653 NAD-dependent DNA ligase adenylation domain XFFB_11165 PF03119 NAD-dependent DNA ligase C4 zinc finger domain XFFB_11165 PF03120 NAD-dependent DNA ligase OB-fold domain XFFB_11165 PF12826 Helix-hairpin-helix motif XFFB_11170 PF04354 ZipA, C-terminal FtsZ-binding domain XFFB_11175 PF02463 RecF/RecN/SMC N terminal domain XFFB_11175 PF06470 SMC proteins Flexible Hinge Domain XFFB_11180 PF01281 Ribosomal protein L9, N-terminal domain XFFB_11180 PF03948 Ribosomal protein L9, C-terminal domain XFFB_11185 PF01084 Ribosomal protein S18 XFFB_11190 PF01250 Ribosomal protein S6 XFFB_11195 PF01521 Iron-sulphur cluster biosynthesis XFFB_11200 PF00152 tRNA synthetases class II (D, K and N) XFFB_11200 PF01336 OB-fold nucleic acid binding domain XFFB_11205 PF01061 XFFB_11205 XFFB_11210 PF00005 ABC transporter XFFB_11215 PF13828 XFFB_11215 XFFB_11225 PF01565 FAD binding domain XFFB_11225 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain XFFB_11230 PF00892 EamA-like transporter family XFFB_11240 PF04551 GcpE protein XFFB_11250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFFB_11255 PF00072 Response regulator receiver domain XFFB_11255 PF02954 Bacterial regulatory protein, Fis family XFFB_11260 PF00889 Elongation factor TS XFFB_11265 PF00318 Ribosomal protein S2 XFFB_11275 PF00005 ABC transporter XFFB_11275 PF00664 ABC transporter transmembrane region XFFB_11280 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) XFFB_11285 PF02321 Outer membrane efflux protein XFFB_11290 PF12850 Calcineurin-like phosphoesterase superfamily domain XFFB_11295 PF02541 Ppx/GppA phosphatase family XFFB_11300 PF02503 Polyphosphate kinase middle domain XFFB_11300 PF13089 Polyphosphate kinase N-terminal domain XFFB_11300 PF13090 Polyphosphate kinase C-terminal domain XFFB_11305 PF00512 His Kinase A (phospho-acceptor) domain XFFB_11305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFFB_11305 PF11808 XFFB_11305 XFFB_11305 PF13188 PAS domain XFFB_11310 PF00072 Response regulator receiver domain XFFB_11310 PF00486 Transcriptional regulatory protein, C terminal XFFB_11315 PF01435 Peptidase family M48 XFFB_11320 PF00462 Glutaredoxin XFFB_11325 PF00180 Isocitrate/isopropylmalate dehydrogenase XFFB_11330 PF13211 XFFB_11330 XFFB_11335 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XFFB_11335 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XFFB_11340 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase XFFB_11345 PF00037 4Fe-4S binding domain XFFB_11345 PF11953 Domain of unknown function (DUF3470) XFFB_11355 PF01106 NifU-like domain XFFB_11360 PF01329 Pterin 4 alpha carbinolamine dehydratase XFFB_11375 PF00575 S1 RNA binding domain XFFB_11375 PF10150 Ribonuclease E/G family XFFB_11380 PF00072 Response regulator receiver domain XFFB_11380 PF00196 Bacterial regulatory proteins, luxR family XFFB_11390 PF00072 Response regulator receiver domain XFFB_11395 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XFFB_11395 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XFFB_11400 PF00545 ribonuclease XFFB_11405 PF01337 Barstar (barnase inhibitor) XFFB_11410 PF00005 ABC transporter XFFB_11410 PF12848 ABC transporter XFFB_11410 PF16326 XFFB_11410 XFFB_11415 PF02696 XFFB_11415 XFFB_11420 PF00313 'Cold-shock' DNA-binding domain XFFB_11425 PF00563 EAL domain XFFB_11425 PF00989 PAS fold XFFB_11425 PF00990 GGDEF domain XFFB_11430 PF01435 Peptidase family M48 XFFB_11435 PF00009 Elongation factor Tu GTP binding domain XFFB_11435 PF03143 Elongation factor Tu C-terminal domain XFFB_11435 PF03144 Elongation factor Tu domain 2 XFFB_11440 PF00009 Elongation factor Tu GTP binding domain XFFB_11440 PF00679 Elongation factor G C-terminus XFFB_11440 PF03144 Elongation factor Tu domain 2 XFFB_11440 PF03764 Elongation factor G, domain IV XFFB_11440 PF14492 Elongation Factor G, domain II XFFB_11445 PF00177 Ribosomal protein S7p/S5e XFFB_11450 PF00164 Ribosomal protein S12/S23 XFFB_11455 PF00623 RNA polymerase Rpb1, domain 2 XFFB_11455 PF04983 RNA polymerase Rpb1, domain 3 XFFB_11455 PF04997 RNA polymerase Rpb1, domain 1 XFFB_11455 PF04998 RNA polymerase Rpb1, domain 5 XFFB_11455 PF05000 RNA polymerase Rpb1, domain 4 XFFB_11460 PF00562 RNA polymerase Rpb2, domain 6 XFFB_11460 PF04560 RNA polymerase Rpb2, domain 7 XFFB_11460 PF04561 RNA polymerase Rpb2, domain 2 XFFB_11460 PF04563 RNA polymerase beta subunit XFFB_11460 PF04565 RNA polymerase Rpb2, domain 3 XFFB_11460 PF10385 RNA polymerase beta subunit external 1 domain XFFB_11465 PF00542 Ribosomal protein L7/L12 C-terminal domain XFFB_11465 PF16320 XFFB_11465 XFFB_11470 PF00466 Ribosomal protein L10 XFFB_11475 PF00687 Ribosomal protein L1p/L10e family XFFB_11480 PF00298 Ribosomal protein L11, RNA binding domain XFFB_11480 PF03946 Ribosomal protein L11, N-terminal domain XFFB_11485 PF00467 KOW motif XFFB_11485 PF02357 Transcription termination factor nusG XFFB_11490 PF00584 SecE/Sec61-gamma subunits of protein translocation complex XFFB_11500 PF00009 Elongation factor Tu GTP binding domain XFFB_11500 PF03143 Elongation factor Tu C-terminal domain XFFB_11500 PF03144 Elongation factor Tu domain 2 XFFB_11520 PF01926 50S ribosome-binding GTPase XFFB_11520 PF06071 Protein of unknown function (DUF933) XFFB_11525 PF01195 Peptidyl-tRNA hydrolase XFFB_11545 PF00288 GHMP kinases N terminal domain XFFB_11545 PF08544 GHMP kinases C terminal XFFB_11550 PF03550 Outer membrane lipoprotein LolB XFFB_11555 PF13432 Tetratricopeptide repeat XFFB_11560 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain XFFB_11560 PF01488 Shikimate / quinate 5-dehydrogenase XFFB_11560 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain XFFB_11565 PF00472 RF-1 domain XFFB_11565 PF03462 PCRF domain XFFB_11580 PF01510 N-acetylmuramoyl-L-alanine amidase XFFB_11590 PF13538 UvrD-like helicase C-terminal domain XFFB_11595 PF10053 XFFB_11595 XFFB_11600 PF01914 XFFB_11600 XFFB_11605 PF00462 Glutaredoxin XFFB_11610 PF02222 ATP-grasp domain XFFB_11615 PF00731 AIR carboxylase XFFB_11620 PF03966 Trm112p-like protein XFFB_11630 PF07731 Multicopper oxidase XFFB_11630 PF07732 Multicopper oxidase XFFB_11635 PF06057 Bacterial virulence protein (VirJ) XFFB_11640 PF00580 UvrD/REP helicase N-terminal domain XFFB_11640 PF13361 UvrD-like helicase C-terminal domain XFFB_11650 PF01343 Peptidase family S49 XFFB_11655 PF01554 MatE XFFB_11660 PF11304 XFFB_11660 XFFB_11670 PF00270 DEAD/DEAH box helicase XFFB_11670 PF00271 Helicase conserved C-terminal domain XFFB_11675 PF04542 Sigma-70 region 2 XFFB_11675 PF04545 Sigma-70, region 4 XFFB_11680 PF03167 Uracil DNA glycosylase superfamily XFFB_11685 PF00072 Response regulator receiver domain XFFB_11695 PF00005 ABC transporter XFFB_11700 PF00270 DEAD/DEAH box helicase XFFB_11700 PF00271 Helicase conserved C-terminal domain XFFB_11700 PF12300 XFFB_11700 XFFB_11705 PF00085 Thioredoxin XFFB_11710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XFFB_11710 PF07497 Rho termination factor, RNA-binding domain XFFB_11710 PF07498 Rho termination factor, N-terminal domain XFFB_11715 PF03971 Monomeric isocitrate dehydrogenase XFFB_11725 PF03572 Peptidase family S41 XFFB_11725 PF13180 PDZ domain XFFB_11730 PF01551 Peptidase family M23 XFFB_11735 PF02225 PA domain XFFB_11735 PF04389 Peptidase family M28 XFFB_11740 PF00150 Cellulase (glycosyl hydrolase family 5) XFFB_11745 PF07992 Pyridine nucleotide-disulphide oxidoreductase XFFB_11745 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster XFFB_11750 PF00310 Glutamine amidotransferases class-II XFFB_11750 PF01493 GXGXG motif XFFB_11750 PF01645 Conserved region in glutamate synthase XFFB_11750 PF04898 Glutamate synthase central domain XFFB_11755 PF03807 NADP oxidoreductase coenzyme F420-dependent XFFB_11755 PF14748 Pyrroline-5-carboxylate reductase dimerisation XFFB_11760 PF00593 TonB dependent receptor XFFB_11760 PF07715 TonB-dependent Receptor Plug Domain XFFB_11775 PF00440 Bacterial regulatory proteins, tetR family XFFB_11780 PF00106 short chain dehydrogenase XFFB_11805 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XFFB_11805 PF04851 Type III restriction enzyme, res subunit XFFB_11815 PF02384 N-6 DNA Methylase XFFB_11815 PF12161 HsdM N-terminal domain XFFB_11825 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XFFB_11825 PF04851 Type III restriction enzyme, res subunit XFFB_11825 PF12008 Type I restriction and modification enzyme - subunit R C terminal XFFB_11845 PF02384 N-6 DNA Methylase XFFB_11845 PF12161 HsdM N-terminal domain XFFB_11855 PF01810 XFFB_11855 XFFB_11870 PF11855 XFFB_11870 XFFB_11875 PF13835 XFFB_11875 XFFB_11880 PF13555 P-loop containing region of AAA domain XFFB_11880 PF13558 Putative exonuclease SbcCD, C subunit XFFB_11885 PF09983 XFFB_11885 XFFB_11885 PF11795 XFFB_11885 XFFB_11900 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XFFB_11900 PF04851 Type III restriction enzyme, res subunit XFFB_11900 PF11867 XFFB_11900 XFFB_11910 PF01420 Type I restriction modification DNA specificity domain XFFB_11915 PF02384 N-6 DNA Methylase XFFB_11915 PF12161 HsdM N-terminal domain XFFB_11930 PF05590 XFFB_11930 XFFB_11980 PF00353 Hemolysin-type calcium-binding repeat (2 copies) XFFB_11980 PF06594 XFFB_11980 XFFB_11985 PF12811 XFFB_11985 XFFB_12020 PF05973 XFFB_12020 XFFB_12045 PF04591 Protein of unknown function, DUF596 XFFB_12055 PF04591 Protein of unknown function, DUF596 XFFB_12060 PF05594 XFFB_12060 XFFB_12075 PF01926 50S ribosome-binding GTPase XFFB_12075 PF10396 GTP-binding protein TrmE N-terminus XFFB_12075 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE XFFB_12080 PF00656 Caspase domain XFFB_12080 PF01522 Polysaccharide deacetylase XFFB_12085 PF02096 60Kd inner membrane protein XFFB_12085 PF14849 YidC periplasmic domain XFFB_12090 PF00825 Ribonuclease P XFFB_12095 PF00468 Ribosomal protein L34