XFC3_00005 PF00308 Bacterial dnaA protein XFC3_00005 PF08299 Bacterial dnaA protein helix-turn-helix XFC3_00005 PF11638 DnaA N-terminal domain XFC3_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain XFC3_00010 PF02767 DNA polymerase III beta subunit, central domain XFC3_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain XFC3_00015 PF02463 RecF/RecN/SMC N terminal domain XFC3_00025 PF00204 DNA gyrase B XFC3_00025 PF00986 DNA gyrase B subunit, carboxyl terminus XFC3_00025 PF01751 Toprim domain XFC3_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFC3_00030 PF02517 CAAX protease self-immunity XFC3_00035 PF01435 Peptidase family M48 XFC3_00040 PF13181 Tetratricopeptide repeat XFC3_00040 PF13432 Tetratricopeptide repeat XFC3_00045 PF03544 Gram-negative bacterial TonB protein C-terminal XFC3_00050 PF01618 XFC3_00050 XFC3_00055 PF02472 Biopolymer transport protein ExbD/TolR XFC3_00060 PF02472 Biopolymer transport protein ExbD/TolR XFC3_00065 PF00326 Prolyl oligopeptidase family XFC3_00065 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XFC3_00075 PF01218 Coproporphyrinogen III oxidase XFC3_00095 PF00793 DAHP synthetase I family XFC3_00110 PF12019 Type II transport protein GspH XFC3_00115 PF07963 Prokaryotic N-terminal methylation motif XFC3_00120 PF16074 XFC3_00120 XFC3_00125 PF13681 XFC3_00125 XFC3_00125 PF14341 XFC3_00125 XFC3_00130 PF05567 Neisseria PilC beta-propeller domain XFC3_00135 PF07963 Prokaryotic N-terminal methylation motif XFC3_00135 PF16732 XFC3_00135 XFC3_00140 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family XFC3_00145 PF00155 Aminotransferase class I and II XFC3_00170 PF07399 XFC3_00170 XFC3_00175 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ XFC3_00180 PF13302 Acetyltransferase (GNAT) domain XFC3_00185 PF00270 DEAD/DEAH box helicase XFC3_00185 PF00271 Helicase conserved C-terminal domain XFC3_00185 PF02559 CarD-like/TRCF domain XFC3_00185 PF03461 TRCF domain XFC3_00195 PF01220 Dehydroquinase class II XFC3_00200 PF00364 Biotin-requiring enzyme XFC3_00205 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain XFC3_00205 PF02785 Biotin carboxylase C-terminal domain XFC3_00205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XFC3_00210 PF00580 UvrD/REP helicase N-terminal domain XFC3_00210 PF13361 UvrD-like helicase C-terminal domain XFC3_00220 PF00042 Globin XFC3_00220 PF00175 Oxidoreductase NAD-binding domain XFC3_00220 PF00970 Oxidoreductase FAD-binding domain XFC3_00235 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ XFC3_00240 PF02195 ParB-like nuclease domain XFC3_00240 PF08535 KorB domain XFC3_00245 PF00156 Phosphoribosyl transferase domain XFC3_00250 PF04055 Radical SAM superfamily XFC3_00250 PF06968 Biotin and Thiamin Synthesis associated domain XFC3_00255 PF01734 Patatin-like phospholipase XFC3_00260 PF01040 UbiA prenyltransferase family XFC3_00295 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XFC3_00295 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XFC3_00300 PF01578 XFC3_00300 XFC3_00305 PF00448 SRP54-type protein, GTPase domain XFC3_00305 PF02881 SRP54-type protein, helical bundle domain XFC3_00305 PF02978 Signal peptide binding domain XFC3_00315 PF01063 Aminotransferase class IV XFC3_00320 PF00419 Fimbrial protein XFC3_00325 PF00419 Fimbrial protein XFC3_00330 PF00577 Outer membrane usher protein XFC3_00330 PF13953 PapC C-terminal domain XFC3_00330 PF13954 PapC N-terminal domain XFC3_00335 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain XFC3_00335 PF02753 Pili assembly chaperone PapD, C-terminal domain XFC3_00340 PF16970 XFC3_00340 XFC3_00345 PF02464 Competence-damaged protein XFC3_00350 PF00083 Sugar (and other) transporter XFC3_00355 PF01926 50S ribosome-binding GTPase XFC3_00355 PF13167 XFC3_00355 XFC3_00355 PF16360 XFC3_00355 XFC3_00360 PF17209 XFC3_00360 XFC3_00365 PF01715 IPP transferase XFC3_00370 PF00809 Pterin binding enzyme XFC3_00380 PF00004 ATPase family associated with various cellular activities (AAA) XFC3_00380 PF01434 Peptidase family M41 XFC3_00380 PF06480 FtsH Extracellular XFC3_00385 PF01728 FtsJ-like methyltransferase XFC3_00390 PF01985 CRS1 / YhbY (CRM) domain XFC3_00395 PF04430 Protein of unknown function (DUF498/DUF598) XFC3_00400 PF00920 Dehydratase family XFC3_00410 PF10276 Zinc-finger domain XFC3_00415 PF00534 Glycosyl transferases group 1 XFC3_00415 PF13439 Glycosyltransferase Family 4 XFC3_00420 PF04932 XFC3_00420 XFC3_00425 PF03279 XFC3_00425 XFC3_00430 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) XFC3_00435 PF00754 F5/8 type C domain XFC3_00435 PF01120 Alpha-L-fucosidase XFC3_00440 PF00886 Ribosomal protein S16 XFC3_00445 PF01782 RimM N-terminal domain XFC3_00445 PF05239 PRC-barrel domain XFC3_00450 PF01746 tRNA (Guanine-1)-methyltransferase XFC3_00455 PF01245 Ribosomal protein L19 XFC3_00460 PF00557 Metallopeptidase family M24 XFC3_00465 PF14602 Hexapeptide repeat of succinyl-transferase XFC3_00465 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal XFC3_00470 PF03960 ArsC family XFC3_00475 PF01546 Peptidase family M20/M25/M40 XFC3_00475 PF07687 Peptidase dimerisation domain XFC3_00480 PF00733 Asparagine synthase XFC3_00480 PF13537 Glutamine amidotransferase domain XFC3_00485 PF13229 Right handed beta helix region XFC3_00490 PF03060 Nitronate monooxygenase XFC3_00495 PF00717 Peptidase S24-like XFC3_00495 PF01726 LexA DNA binding domain XFC3_00500 PF00154 recA bacterial DNA recombination protein XFC3_00510 PF02599 Global regulator protein family XFC3_00520 PF01432 Peptidase family M3 XFC3_00525 PF00291 Pyridoxal-phosphate dependent enzyme XFC3_00535 PF00394 Multicopper oxidase XFC3_00535 PF07731 Multicopper oxidase XFC3_00535 PF07732 Multicopper oxidase XFC3_00540 PF05275 XFC3_00540 XFC3_00545 PF00133 tRNA synthetases class I (I, L, M and V) XFC3_00545 PF08264 Anticodon-binding domain of tRNA XFC3_00545 PF10458 Valyl tRNA synthetase tRNA binding arm XFC3_00555 PF04364 DNA polymerase III chi subunit, HolC XFC3_00565 PF00883 Cytosol aminopeptidase family, catalytic domain XFC3_00565 PF02789 Cytosol aminopeptidase family, N-terminal domain XFC3_00570 PF03739 XFC3_00570 XFC3_00575 PF03739 XFC3_00575 XFC3_00585 PF01380 SIS domain XFC3_00585 PF13522 Glutamine amidotransferase domain XFC3_00590 PF01757 XFC3_00590 XFC3_00595 PF01564 Spermine/spermidine synthase XFC3_00595 PF17284 XFC3_00595 XFC3_00600 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XFC3_00605 PF00106 short chain dehydrogenase XFC3_00610 PF05036 Sporulation related domain XFC3_00615 PF00750 tRNA synthetases class I (R) XFC3_00615 PF03485 Arginyl tRNA synthetase N terminal domain XFC3_00615 PF05746 DALR anticodon binding domain XFC3_00620 PF04002 RadC-like JAB domain XFC3_00625 PF02441 Flavoprotein XFC3_00625 PF04127 DNA / pantothenate metabolism flavoprotein XFC3_00630 PF00692 dUTPase XFC3_00635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XFC3_00635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XFC3_00635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XFC3_00635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XFC3_00645 PF00156 Phosphoribosyl transferase domain XFC3_00650 PF11692 XFC3_00650 XFC3_00655 PF00112 Papain family cysteine protease XFC3_00670 PF10088 XFC3_00670 XFC3_00675 PF03372 Endonuclease/Exonuclease/phosphatase family XFC3_00680 PF13000 XFC3_00680 XFC3_00685 PF03702 Uncharacterised protein family (UPF0075) XFC3_00690 PF01551 Peptidase family M23 XFC3_00690 PF04225 Opacity-associated protein A LysM-like domain XFC3_00695 PF00579 tRNA synthetases class I (W and Y) XFC3_00695 PF01479 S4 domain XFC3_00725 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XFC3_00725 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XFC3_00730 PF01578 XFC3_00730 XFC3_00735 PF05960 Bacterial protein of unknown function (DUF885) XFC3_00740 PF13561 Enoyl-(Acyl carrier protein) reductase XFC3_00745 PF00009 Elongation factor Tu GTP binding domain XFC3_00745 PF16658 XFC3_00745 XFC3_00750 PF03006 XFC3_00750 XFC3_00755 PF00535 Glycosyl transferase family 2 XFC3_00760 PF01026 TatD related DNase XFC3_00765 PF05433 XFC3_00765 XFC3_00775 PF01597 Glycine cleavage H-protein XFC3_00780 PF01571 Aminomethyltransferase folate-binding domain XFC3_00780 PF08669 Glycine cleavage T-protein C-terminal barrel domain XFC3_00785 PF01957 NfeD-like C-terminal, partner-binding XFC3_00790 PF01145 SPFH domain / Band 7 family XFC3_00790 PF16200 XFC3_00790 XFC3_00795 PF03819 MazG nucleotide pyrophosphohydrolase domain XFC3_00800 PF00459 Inositol monophosphatase family XFC3_00805 PF00293 NUDIX domain XFC3_00810 PF00202 Aminotransferase class-III XFC3_00815 PF04452 RNA methyltransferase XFC3_00820 PF00270 DEAD/DEAH box helicase XFC3_00820 PF00271 Helicase conserved C-terminal domain XFC3_00825 PF01242 6-pyruvoyl tetrahydropterin synthase XFC3_00835 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) XFC3_00840 PF01553 Acyltransferase XFC3_00845 PF04367 XFC3_00845 XFC3_00850 PF13489 Methyltransferase domain XFC3_00855 PF03653 XFC3_00855 XFC3_00860 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit XFC3_00865 PF01336 OB-fold nucleic acid binding domain XFC3_00865 PF02811 PHP domain XFC3_00865 PF07733 Bacterial DNA polymerase III alpha subunit XFC3_00865 PF14579 Helix-hairpin-helix motif XFC3_00870 PF01259 SAICAR synthetase XFC3_00875 PF00226 DnaJ domain XFC3_00880 PF00834 Ribulose-phosphate 3 epimerase family XFC3_00885 PF00425 chorismate binding enzyme XFC3_00885 PF04715 Anthranilate synthase component I, N terminal region XFC3_00890 PF00117 Glutamine amidotransferase class-I XFC3_00895 PF00591 Glycosyl transferase family, a/b domain XFC3_00895 PF02885 Glycosyl transferase family, helical bundle domain XFC3_00900 PF00218 Indole-3-glycerol phosphate synthase XFC3_00905 PF12710 haloacid dehalogenase-like hydrolase XFC3_00910 PF01047 MarR family XFC3_00920 PF00557 Metallopeptidase family M24 XFC3_00920 PF01321 Creatinase/Prolidase N-terminal domain XFC3_00925 PF05960 Bacterial protein of unknown function (DUF885) XFC3_00930 PF05960 Bacterial protein of unknown function (DUF885) XFC3_00935 PF01702 Queuine tRNA-ribosyltransferase XFC3_00940 PF02699 Preprotein translocase subunit XFC3_00945 PF02355 Protein export membrane protein XFC3_00945 PF07549 SecD/SecF GG Motif XFC3_00945 PF13721 SecD export protein N-terminal TM region XFC3_00950 PF02355 Protein export membrane protein XFC3_00950 PF07549 SecD/SecF GG Motif XFC3_00960 PF01743 Poly A polymerase head domain XFC3_00960 PF12626 Polymerase A arginine-rich C-terminus XFC3_00960 PF12627 Probable RNA and SrmB- binding site of polymerase A XFC3_00965 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XFC3_00970 PF02548 Ketopantoate hydroxymethyltransferase XFC3_00975 PF02569 Pantoate-beta-alanine ligase XFC3_00980 PF02261 Aspartate decarboxylase XFC3_00985 PF00342 Phosphoglucose isomerase XFC3_01000 PF02576 Uncharacterised BCR, YhbC family COG0779 XFC3_01000 PF17384 XFC3_01000 XFC3_01005 PF00575 S1 RNA binding domain XFC3_01005 PF08529 NusA N-terminal domain XFC3_01005 PF13184 NusA-like KH domain XFC3_01005 PF14520 Helix-hairpin-helix domain XFC3_01010 PF00009 Elongation factor Tu GTP binding domain XFC3_01010 PF04760 Translation initiation factor IF-2, N-terminal region XFC3_01010 PF08364 XFC3_01010 XFC3_01010 PF11987 Translation-initiation factor 2 XFC3_01015 PF02033 Ribosome-binding factor A XFC3_01020 PF01509 TruB family pseudouridylate synthase (N terminal domain) XFC3_01020 PF09157 Pseudouridine synthase II TruB, C-terminal XFC3_01020 PF16198 XFC3_01020 XFC3_01025 PF00312 Ribosomal protein S15 XFC3_01030 PF00013 KH domain XFC3_01030 PF00575 S1 RNA binding domain XFC3_01030 PF01138 3' exoribonuclease family, domain 1 XFC3_01030 PF03725 3' exoribonuclease family, domain 2 XFC3_01030 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain XFC3_01035 PF01638 HxlR-like helix-turn-helix XFC3_01040 PF05368 NmrA-like family XFC3_01055 PF00873 AcrB/AcrD/AcrF family XFC3_01060 PF16576 XFC3_01060 XFC3_01075 PF00892 EamA-like transporter family XFC3_01080 PF00270 DEAD/DEAH box helicase XFC3_01080 PF00271 Helicase conserved C-terminal domain XFC3_01080 PF03880 DbpA RNA binding domain XFC3_01085 PF00766 Electron transfer flavoprotein FAD-binding domain XFC3_01085 PF01012 Electron transfer flavoprotein domain XFC3_01090 PF01012 Electron transfer flavoprotein domain XFC3_01095 PF16363 XFC3_01095 XFC3_01100 PF00483 Nucleotidyl transferase XFC3_01105 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase XFC3_01110 PF04321 RmlD substrate binding domain XFC3_01115 PF00483 Nucleotidyl transferase XFC3_01115 PF01050 Mannose-6-phosphate isomerase XFC3_01120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XFC3_01120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XFC3_01120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XFC3_01120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XFC3_01155 PF06779 XFC3_01155 XFC3_01160 PF07273 Protein of unknown function (DUF1439) XFC3_01165 PF00365 Phosphofructokinase XFC3_01170 PF00406 Adenylate kinase XFC3_01175 PF01225 Mur ligase family, catalytic domain XFC3_01175 PF02875 Mur ligase family, glutamate ligase domain XFC3_01175 PF08245 Mur ligase middle domain XFC3_01180 PF01569 PAP2 superfamily XFC3_01180 PF09335 XFC3_01180 XFC3_01180 PF14067 XFC3_01180 XFC3_01185 PF01636 Phosphotransferase enzyme family XFC3_01190 PF00883 Cytosol aminopeptidase family, catalytic domain XFC3_01195 PF01594 XFC3_01195 XFC3_01215 PF13180 PDZ domain XFC3_01215 PF13365 Trypsin-like peptidase domain XFC3_01220 PF01370 NAD dependent epimerase/dehydratase family XFC3_01220 PF08338 Domain of unknown function (DUF1731) XFC3_01225 PF00501 AMP-binding enzyme XFC3_01225 PF13193 AMP-binding enzyme C-terminal domain XFC3_01230 PF00330 Aconitase family (aconitate hydratase) XFC3_01230 PF00694 Aconitase C-terminal domain XFC3_01235 PF04014 Antidote-toxin recognition MazE XFC3_01240 PF01850 PIN domain XFC3_01245 PF00330 Aconitase family (aconitate hydratase) XFC3_01245 PF06434 Aconitate hydratase 2 N-terminus XFC3_01245 PF11791 Aconitate B N-terminal domain XFC3_01265 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XFC3_01265 PF04851 Type III restriction enzyme, res subunit XFC3_01275 PF01420 Type I restriction modification DNA specificity domain XFC3_01280 PF02384 N-6 DNA Methylase XFC3_01305 PF00121 Triosephosphate isomerase XFC3_01310 PF03840 Preprotein translocase SecG subunit XFC3_01320 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 XFC3_01325 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit XFC3_01330 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit XFC3_01335 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit XFC3_01340 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin XFC3_01345 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit XFC3_01345 PF10531 SLBB domain XFC3_01345 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XFC3_01350 PF00384 Molybdopterin oxidoreductase XFC3_01350 PF01568 Molydopterin dinucleotide binding domain XFC3_01350 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XFC3_01350 PF13510 2Fe-2S iron-sulfur cluster binding domain XFC3_01355 PF00146 NADH dehydrogenase XFC3_01360 PF12838 4Fe-4S dicluster domain XFC3_01365 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 XFC3_01370 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XFC3_01375 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains XFC3_01375 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XFC3_01380 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains XFC3_01385 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains XFC3_01390 PF13561 Enoyl-(Acyl carrier protein) reductase XFC3_01395 PF03600 Citrate transporter XFC3_01400 PF07396 Phosphate-selective porin O and P XFC3_01405 PF00072 Response regulator receiver domain XFC3_01405 PF00486 Transcriptional regulatory protein, C terminal XFC3_01410 PF00512 His Kinase A (phospho-acceptor) domain XFC3_01410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFC3_01410 PF08521 XFC3_01410 XFC3_01415 PF13531 Bacterial extracellular solute-binding protein XFC3_01425 PF01385 XFC3_01425 XFC3_01425 PF07282 XFC3_01425 XFC3_01455 PF07120 XFC3_01455 XFC3_01460 PF02590 Predicted SPOUT methyltransferase XFC3_01465 PF00593 TonB dependent receptor XFC3_01465 PF07715 TonB-dependent Receptor Plug Domain XFC3_01470 PF02600 Disulfide bond formation protein DsbB XFC3_01480 PF00691 OmpA family XFC3_01480 PF13505 Outer membrane protein beta-barrel domain XFC3_01490 PF01565 FAD binding domain XFC3_01490 PF02913 FAD linked oxidases, C-terminal domain XFC3_01495 PF02824 TGS domain XFC3_01495 PF04607 Region found in RelA / SpoT proteins XFC3_01495 PF13291 ACT domain XFC3_01495 PF13328 HD domain XFC3_01500 PF01042 Endoribonuclease L-PSP XFC3_01505 PF00270 DEAD/DEAH box helicase XFC3_01505 PF00271 Helicase conserved C-terminal domain XFC3_01505 PF17191 XFC3_01505 XFC3_01510 PF00067 Cytochrome P450 XFC3_01515 PF03583 Secretory lipase XFC3_01520 PF03583 Secretory lipase XFC3_01525 PF00772 DnaB-like helicase N terminal domain XFC3_01525 PF03796 DnaB-like helicase C terminal domain XFC3_01535 PF00691 OmpA family XFC3_01535 PF13488 XFC3_01535 XFC3_01540 PF00294 pfkB family carbohydrate kinase XFC3_01545 PF00248 Aldo/keto reductase family XFC3_01550 PF00905 Penicillin binding protein transpeptidase domain XFC3_01550 PF00912 Transglycosylase XFC3_01550 PF17092 XFC3_01550 XFC3_01555 PF11104 Type IV pilus assembly protein PilM; XFC3_01560 PF05137 XFC3_01560 XFC3_01565 PF04350 Pilus assembly protein, PilO XFC3_01570 PF04351 Pilus assembly protein, PilP XFC3_01580 PF01569 PAP2 superfamily XFC3_01585 PF00884 Sulfatase XFC3_01585 PF08019 XFC3_01585 XFC3_01590 PF00067 Cytochrome P450 XFC3_01595 PF02581 Thiamine monophosphate synthase/TENI XFC3_01600 PF00301 Rubredoxin XFC3_01605 PF00004 ATPase family associated with various cellular activities (AAA) XFC3_01605 PF02861 Clp amino terminal domain XFC3_01605 PF07724 AAA domain (Cdc48 subfamily) XFC3_01605 PF10431 C-terminal, D2-small domain, of ClpB protein XFC3_01610 PF17067 XFC3_01610 XFC3_01615 PF03203 XFC3_01615 XFC3_01620 PF00593 TonB dependent receptor XFC3_01620 PF07715 TonB-dependent Receptor Plug Domain XFC3_01625 PF01207 Dihydrouridine synthase (Dus) XFC3_01635 PF00072 Response regulator receiver domain XFC3_01635 PF00486 Transcriptional regulatory protein, C terminal XFC3_01640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFC3_01645 PF00438 S-adenosylmethionine synthetase, N-terminal domain XFC3_01645 PF02772 S-adenosylmethionine synthetase, central domain XFC3_01645 PF02773 S-adenosylmethionine synthetase, C-terminal domain XFC3_01660 PF00293 NUDIX domain XFC3_01665 PF04324 BFD-like [2Fe-2S] binding domain XFC3_01670 PF00210 Ferritin-like domain XFC3_01680 PF00072 Response regulator receiver domain XFC3_01680 PF00563 EAL domain XFC3_01680 PF00990 GGDEF domain XFC3_01690 PF04519 XFC3_01690 XFC3_01695 PF01521 Iron-sulphur cluster biosynthesis XFC3_01700 PF03741 XFC3_01700 XFC3_01705 PF10672 S-adenosylmethionine-dependent methyltransferase XFC3_01710 PF13520 Amino acid permease XFC3_01715 PF00528 Binding-protein-dependent transport system inner membrane component XFC3_01720 PF00005 ABC transporter XFC3_01720 PF09821 XFC3_01720 XFC3_01725 PF02646 XFC3_01725 XFC3_01735 PF04333 XFC3_01735 XFC3_01740 PF13466 STAS domain XFC3_01745 PF05494 Toluene tolerance, Ttg2 XFC3_01750 PF02470 XFC3_01750 XFC3_01755 PF02405 XFC3_01755 XFC3_01760 PF00005 ABC transporter XFC3_01765 PF04257 Exodeoxyribonuclease V, gamma subunit XFC3_01770 PF00580 UvrD/REP helicase N-terminal domain XFC3_01770 PF12705 PD-(D/E)XK nuclease superfamily XFC3_01770 PF13361 UvrD-like helicase C-terminal domain XFC3_01780 PF13245 Part of AAA domain XFC3_01780 PF13538 UvrD-like helicase C-terminal domain XFC3_01785 PF00579 tRNA synthetases class I (W and Y) XFC3_01790 PF01807 CHC2 zinc finger XFC3_01790 PF08275 DNA primase catalytic core, N-terminal domain XFC3_01790 PF08278 DNA primase DnaG DnaB-binding XFC3_01790 PF10410 DnaB-helicase binding domain of primase XFC3_01790 PF13662 Toprim domain XFC3_01795 PF03631 XFC3_01795 XFC3_01800 PF09424 Yqey-like protein XFC3_01805 PF01165 Ribosomal protein S21 XFC3_01810 PF00814 Glycoprotease family XFC3_01815 PF02152 Dihydroneopterin aldolase XFC3_01820 PF00924 Mechanosensitive ion channel XFC3_01825 PF00933 Glycosyl hydrolase family 3 N terminal domain XFC3_01825 PF01915 Glycosyl hydrolase family 3 C-terminal domain XFC3_01825 PF14310 Fibronectin type III-like domain XFC3_01830 PF13673 Acetyltransferase (GNAT) domain XFC3_01840 PF01066 CDP-alcohol phosphatidyltransferase XFC3_01845 PF13511 XFC3_01845 XFC3_01850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XFC3_01850 PF03129 Anticodon binding domain XFC3_01850 PF04073 Aminoacyl-tRNA editing domain XFC3_01855 PF00816 H-NS histone family XFC3_01860 PF04342 XFC3_01860 XFC3_01865 PF00072 Response regulator receiver domain XFC3_01870 PF00107 Zinc-binding dehydrogenase XFC3_01875 PF01145 SPFH domain / Band 7 family XFC3_01880 PF01145 SPFH domain / Band 7 family XFC3_01885 PF09838 XFC3_01885 XFC3_01890 PF00709 Adenylosuccinate synthetase XFC3_01895 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XFC3_01895 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XFC3_01900 PF00334 Nucleoside diphosphate kinase XFC3_01905 PF04055 Radical SAM superfamily XFC3_01910 PF13181 Tetratricopeptide repeat XFC3_01915 PF13413 Helix-turn-helix domain XFC3_01915 PF13464 XFC3_01915 XFC3_01920 PF09976 Tetratricopeptide repeat XFC3_01925 PF01011 PQQ enzyme repeat XFC3_01925 PF13360 PQQ-like domain XFC3_01930 PF01926 50S ribosome-binding GTPase XFC3_01930 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal XFC3_01935 PF00581 Rhodanese-like domain XFC3_01935 PF00899 ThiF family XFC3_01945 PF00563 EAL domain XFC3_01945 PF12792 XFC3_01945 XFC3_01950 PF03641 Possible lysine decarboxylase XFC3_01950 PF11892 Domain of unknown function (DUF3412) XFC3_01950 PF14793 Domain of unknown function (DUF4478) XFC3_01955 PF07963 Prokaryotic N-terminal methylation motif XFC3_01955 PF12019 Type II transport protein GspH XFC3_01965 PF16074 XFC3_01965 XFC3_01970 PF14341 XFC3_01970 XFC3_01975 PF05567 Neisseria PilC beta-propeller domain XFC3_01980 PF07963 Prokaryotic N-terminal methylation motif XFC3_01980 PF16732 XFC3_01980 XFC3_01995 PF01385 XFC3_01995 XFC3_01995 PF07282 XFC3_01995 XFC3_02000 PF13274 XFC3_02000 XFC3_02005 PF00114 Pilin (bacterial filament) XFC3_02005 PF07963 Prokaryotic N-terminal methylation motif XFC3_02010 PF00114 Pilin (bacterial filament) XFC3_02010 PF07963 Prokaryotic N-terminal methylation motif XFC3_02035 PF01588 Putative tRNA binding domain XFC3_02035 PF09334 tRNA synthetases class I (M) XFC3_02040 PF00593 TonB dependent receptor XFC3_02040 PF07715 TonB-dependent Receptor Plug Domain XFC3_02045 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XFC3_02050 PF04348 LppC putative lipoprotein XFC3_02055 PF02021 Uncharacterised protein family UPF0102 XFC3_02060 PF03193 Protein of unknown function, DUF258 XFC3_02065 PF00127 Copper binding proteins, plastocyanin/azurin family XFC3_02075 PF00117 Glutamine amidotransferase class-I XFC3_02085 PF00902 Sec-independent protein translocase protein (TatC) XFC3_02090 PF02416 mttA/Hcf106 family XFC3_02095 PF02416 mttA/Hcf106 family XFC3_02100 PF04366 XFC3_02100 XFC3_02105 PF00762 Ferrochelatase XFC3_02110 PF01863 Protein of unknown function DUF45 XFC3_02115 PF04381 Putative exonuclease, RdgC XFC3_02120 PF01171 PP-loop family XFC3_02130 PF07977 FabA-like domain XFC3_02150 PF01431 Peptidase family M13 XFC3_02150 PF05649 Peptidase family M13 XFC3_02155 PF02223 Thymidylate kinase XFC3_02160 PF11306 Protein of unknown function (DUF3108) XFC3_02165 PF11306 Protein of unknown function (DUF3108) XFC3_02170 PF00551 Formyl transferase XFC3_02175 PF00586 AIR synthase related protein, N-terminal domain XFC3_02175 PF02769 AIR synthase related protein, C-terminal domain XFC3_02180 PF09839 XFC3_02180 XFC3_02185 PF01594 XFC3_02185 XFC3_02190 PF01695 IstB-like ATP binding protein XFC3_02195 PF00483 Nucleotidyl transferase XFC3_02200 PF01636 Phosphotransferase enzyme family XFC3_02205 PF12836 Helix-hairpin-helix motif XFC3_02210 PF02424 ApbE family XFC3_02215 PF10670 XFC3_02215 XFC3_02220 PF10029 XFC3_02220 XFC3_02225 PF16357 XFC3_02225 XFC3_02230 PF13640 2OG-Fe(II) oxygenase superfamily XFC3_02235 PF00593 TonB dependent receptor XFC3_02235 PF07715 TonB-dependent Receptor Plug Domain XFC3_02240 PF14346 Domain of unknown function (DUF4398) XFC3_02250 PF04325 Protein of unknown function (DUF465) XFC3_02255 PF00291 Pyridoxal-phosphate dependent enzyme XFC3_02255 PF00571 CBS domain XFC3_02260 PF05050 Methyltransferase FkbM domain XFC3_02265 PF00534 Glycosyl transferases group 1 XFC3_02265 PF13439 Glycosyltransferase Family 4 XFC3_02270 PF16363 XFC3_02270 XFC3_02275 PF16363 XFC3_02275 XFC3_02280 PF16363 XFC3_02280 XFC3_02285 PF00535 Glycosyl transferase family 2 XFC3_02290 PF04138 XFC3_02290 XFC3_02305 PF00118 TCP-1/cpn60 chaperonin family XFC3_02310 PF00166 Chaperonin 10 Kd subunit XFC3_02315 PF03091 CutA1 divalent ion tolerance protein XFC3_02320 PF11412 Disulphide bond corrector protein DsbC XFC3_02320 PF13899 Thioredoxin-like XFC3_02325 PF08543 Phosphomethylpyrimidine kinase XFC3_02330 PF01488 Shikimate / quinate 5-dehydrogenase XFC3_02330 PF08501 Shikimate dehydrogenase substrate binding domain XFC3_02345 PF10137 XFC3_02345 XFC3_02355 PF10083 XFC3_02355 XFC3_02360 PF00589 Phage integrase family XFC3_02360 PF13356 Domain of unknown function (DUF4102) XFC3_02365 PF12728 Helix-turn-helix domain XFC3_02370 PF13481 AAA domain XFC3_02410 PF12183 Restriction endonuclease NotI XFC3_02415 PF01555 DNA methylase XFC3_02425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XFC3_02425 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XFC3_02435 PF00633 Helix-hairpin-helix motif XFC3_02435 PF00730 HhH-GPD superfamily base excision DNA repair protein XFC3_02435 PF10576 Iron-sulfur binding domain of endonuclease III XFC3_02440 PF01694 Rhomboid family XFC3_02445 PF04235 XFC3_02445 XFC3_02450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XFC3_02455 PF00877 NlpC/P60 family XFC3_02460 PF00877 NlpC/P60 family XFC3_02470 PF00375 Sodium:dicarboxylate symporter family XFC3_02485 PF01171 PP-loop family XFC3_02485 PF09179 TilS substrate binding domain XFC3_02485 PF11734 TilS substrate C-terminal domain XFC3_02490 PF02609 Exonuclease VII small subunit XFC3_02495 PF00348 Polyprenyl synthetase XFC3_02515 PF00353 Hemolysin-type calcium-binding repeat (2 copies) XFC3_02515 PF06594 XFC3_02515 XFC3_02520 PF00456 Transketolase, thiamine diphosphate binding domain XFC3_02525 PF00698 Acyl transferase domain XFC3_02530 PF13561 Enoyl-(Acyl carrier protein) reductase XFC3_02535 PF00550 Phosphopantetheine attachment site XFC3_02540 PF00109 Beta-ketoacyl synthase, N-terminal domain XFC3_02540 PF02801 Beta-ketoacyl synthase, C-terminal domain XFC3_02545 PF00425 chorismate binding enzyme XFC3_02545 PF04715 Anthranilate synthase component I, N terminal region XFC3_02550 PF02618 YceG-like family XFC3_02555 PF13177 DNA polymerase III, delta subunit XFC3_02560 PF07238 PilZ domain XFC3_02575 PF13500 AAA domain XFC3_02580 PF00459 Inositol monophosphatase family XFC3_02585 PF00588 SpoU rRNA Methylase family XFC3_02590 PF13394 4Fe-4S single cluster domain XFC3_02595 PF01132 Elongation factor P (EF-P) OB domain XFC3_02595 PF08207 Elongation factor P (EF-P) KOW-like domain XFC3_02595 PF09285 Elongation factor P, C-terminal XFC3_02600 PF01979 Amidohydrolase family XFC3_02605 PF13489 Methyltransferase domain XFC3_02610 PF13419 Haloacid dehalogenase-like hydrolase XFC3_02625 PF00561 alpha/beta hydrolase fold XFC3_02640 PF03918 Cytochrome C biogenesis protein XFC3_02645 PF08534 Redoxin XFC3_02650 PF01578 XFC3_02650 XFC3_02650 PF16327 XFC3_02650 XFC3_02655 PF03100 CcmE XFC3_02660 PF01578 XFC3_02660 XFC3_02665 PF03379 XFC3_02665 XFC3_02670 PF00005 ABC transporter XFC3_02675 PF00155 Aminotransferase class I and II XFC3_02680 PF00795 Carbon-nitrogen hydrolase XFC3_02690 PF00849 RNA pseudouridylate synthase XFC3_02690 PF01479 S4 domain XFC3_02700 PF02616 ScpA/B protein XFC3_02705 PF01722 BolA-like protein XFC3_02710 PF10091 Putative glucoamylase XFC3_02715 PF13416 Bacterial extracellular solute-binding protein XFC3_02720 PF00528 Binding-protein-dependent transport system inner membrane component XFC3_02725 PF00528 Binding-protein-dependent transport system inner membrane component XFC3_02730 PF00754 F5/8 type C domain XFC3_02730 PF06202 Amylo-alpha-1,6-glucosidase XFC3_02735 PF01963 XFC3_02735 XFC3_02740 PF00795 Carbon-nitrogen hydrolase XFC3_02745 PF04371 Porphyromonas-type peptidyl-arginine deiminase XFC3_02755 PF02224 Cytidylate kinase XFC3_02760 PF00575 S1 RNA binding domain XFC3_02765 PF00216 Bacterial DNA-binding protein XFC3_02770 PF06305 XFC3_02770 XFC3_02775 PF13432 Tetratricopeptide repeat XFC3_02780 PF00953 Glycosyl transferase family 4 XFC3_02785 PF02719 Polysaccharide biosynthesis protein XFC3_02785 PF13727 CoA-binding domain XFC3_02790 PF00483 Nucleotidyl transferase XFC3_02795 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain XFC3_02795 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain XFC3_02800 PF00478 IMP dehydrogenase / GMP reductase domain XFC3_02800 PF00571 CBS domain XFC3_02805 PF00117 Glutamine amidotransferase class-I XFC3_02805 PF00958 GMP synthase C terminal domain XFC3_02805 PF02540 NAD synthase XFC3_02820 PF00005 ABC transporter XFC3_02825 PF00829 Ribosomal prokaryotic L21 protein XFC3_02830 PF01016 Ribosomal L27 protein XFC3_02835 PF01018 GTP1/OBG XFC3_02835 PF01926 50S ribosome-binding GTPase XFC3_02840 PF01649 Ribosomal protein S20 XFC3_02845 PF03023 XFC3_02845 XFC3_02855 PF00133 tRNA synthetases class I (I, L, M and V) XFC3_02855 PF06827 Zinc finger found in FPG and IleRS XFC3_02855 PF08264 Anticodon-binding domain of tRNA XFC3_02860 PF01252 XFC3_02860 XFC3_02865 PF02401 LytB protein XFC3_02885 PF13166 XFC3_02885 XFC3_02895 PF13086 AAA domain XFC3_02895 PF13087 AAA domain XFC3_02895 PF13091 PLD-like domain XFC3_02905 PF00353 Hemolysin-type calcium-binding repeat (2 copies) XFC3_02905 PF06594 XFC3_02905 XFC3_02945 PF13437 HlyD family secretion protein XFC3_02950 PF00005 ABC transporter XFC3_02950 PF00664 ABC transporter transmembrane region XFC3_02950 PF03412 Peptidase C39 family XFC3_02955 PF00155 Aminotransferase class I and II XFC3_02960 PF01522 Polysaccharide deacetylase XFC3_02965 PF00462 Glutaredoxin XFC3_02965 PF00581 Rhodanese-like domain XFC3_02970 PF01183 Glycosyl hydrolases family 25 XFC3_02990 PF00873 AcrB/AcrD/AcrF family XFC3_02995 PF00873 AcrB/AcrD/AcrF family XFC3_03000 PF16576 XFC3_03000 XFC3_03005 PF14489 QueF-like protein XFC3_03005 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term XFC3_03020 PF00330 Aconitase family (aconitate hydratase) XFC3_03025 PF00694 Aconitase C-terminal domain XFC3_03030 PF00180 Isocitrate/isopropylmalate dehydrogenase XFC3_03035 PF02563 Polysaccharide biosynthesis/export protein XFC3_03035 PF10531 SLBB domain XFC3_03040 PF02706 Chain length determinant protein XFC3_03040 PF13807 XFC3_03040 XFC3_03045 PF02397 XFC3_03045 XFC3_03045 PF13727 CoA-binding domain XFC3_03055 PF01757 XFC3_03055 XFC3_03060 PF00534 Glycosyl transferases group 1 XFC3_03060 PF13439 Glycosyltransferase Family 4 XFC3_03070 PF13440 XFC3_03070 XFC3_03080 PF03808 XFC3_03080 XFC3_03085 PF00072 Response regulator receiver domain XFC3_03085 PF01627 Hpt domain XFC3_03090 PF05958 tRNA (Uracil-5-)-methyltransferase XFC3_03095 PF01928 CYTH domain XFC3_03100 PF00933 Glycosyl hydrolase family 3 N terminal domain XFC3_03105 PF00156 Phosphoribosyl transferase domain XFC3_03110 PF01048 Phosphorylase superfamily XFC3_03115 PF00313 'Cold-shock' DNA-binding domain XFC3_03125 PF01668 SmpB protein XFC3_03130 PF03364 Polyketide cyclase / dehydrase and lipid transport XFC3_03135 PF03658 RnfH family Ubiquitin XFC3_03140 PF04355 SmpA / OmlA family XFC3_03145 PF01475 Ferric uptake regulator family XFC3_03150 PF02463 RecF/RecN/SMC N terminal domain XFC3_03155 PF01628 HrcA protein C terminal domain XFC3_03155 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding XFC3_03160 PF01025 GrpE XFC3_03165 PF00012 Hsp70 protein XFC3_03170 PF00226 DnaJ domain XFC3_03170 PF00684 DnaJ central domain XFC3_03170 PF01556 DnaJ C terminal domain XFC3_03175 PF02153 Prephenate dehydrogenase XFC3_03180 PF00072 Response regulator receiver domain XFC3_03180 PF00486 Transcriptional regulatory protein, C terminal XFC3_03185 PF01219 Prokaryotic diacylglycerol kinase XFC3_03190 PF01790 XFC3_03190 XFC3_03195 PF00303 Thymidylate synthase XFC3_03200 PF00186 Dihydrofolate reductase XFC3_03205 PF00561 alpha/beta hydrolase fold XFC3_03205 PF08386 TAP-like protein XFC3_03210 PF00005 ABC transporter XFC3_03215 PF12679 XFC3_03215 XFC3_03220 PF03544 Gram-negative bacterial TonB protein C-terminal XFC3_03225 PF00266 Aminotransferase class-V XFC3_03230 PF00800 Prephenate dehydratase XFC3_03230 PF01817 Chorismate mutase type II XFC3_03230 PF01842 ACT domain XFC3_03235 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XFC3_03270 PF04865 XFC3_03270 XFC3_03275 PF00959 Phage lysozyme XFC3_03280 PF01555 DNA methylase XFC3_03290 PF01541 GIY-YIG catalytic domain XFC3_03290 PF02151 UvrB/uvrC motif XFC3_03290 PF08459 UvrC Helix-hairpin-helix N-terminal XFC3_03295 PF01066 CDP-alcohol phosphatidyltransferase XFC3_03315 PF00490 Delta-aminolevulinic acid dehydratase XFC3_03320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XFC3_03335 PF00202 Aminotransferase class-III XFC3_03340 PF10609 ParA/MinD ATPase like XFC3_03345 PF02348 Cytidylyltransferase XFC3_03350 PF01451 Low molecular weight phosphotyrosine protein phosphatase XFC3_03355 PF01555 DNA methylase XFC3_03380 PF08774 VRR-NUC domain XFC3_03390 PF13986 XFC3_03390 XFC3_03395 PF00589 Phage integrase family XFC3_03400 PF03544 Gram-negative bacterial TonB protein C-terminal XFC3_03405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XFC3_03405 PF02403 Seryl-tRNA synthetase N-terminal domain XFC3_03410 PF00753 Metallo-beta-lactamase superfamily XFC3_03415 PF13614 AAA domain XFC3_03420 PF02195 ParB-like nuclease domain XFC3_03425 PF01370 NAD dependent epimerase/dehydratase family XFC3_03430 PF00535 Glycosyl transferase family 2 XFC3_03435 PF07578 Lipid A Biosynthesis N-terminal domain XFC3_03440 PF00501 AMP-binding enzyme XFC3_03450 PF02677 XFC3_03450 XFC3_03455 PF01717 Cobalamin-independent synthase, Catalytic domain XFC3_03455 PF08267 Cobalamin-independent synthase, N-terminal domain XFC3_03460 PF01263 Aldose 1-epimerase XFC3_03465 PF00106 short chain dehydrogenase XFC3_03465 PF13561 Enoyl-(Acyl carrier protein) reductase XFC3_03470 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XFC3_03470 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XFC3_03475 PF00230 Major intrinsic protein XFC3_03480 PF01266 FAD dependent oxidoreductase XFC3_03480 PF16901 XFC3_03480 XFC3_03490 PF03169 XFC3_03490 XFC3_03495 PF00326 Prolyl oligopeptidase family XFC3_03495 PF07676 WD40-like Beta Propeller Repeat XFC3_03500 PF13360 PQQ-like domain XFC3_03510 PF02659 XFC3_03510 XFC3_03515 PF00501 AMP-binding enzyme XFC3_03515 PF13193 AMP-binding enzyme C-terminal domain XFC3_03515 PF16177 XFC3_03515 XFC3_03520 PF04341 XFC3_03520 XFC3_03525 PF00474 Sodium:solute symporter family XFC3_03530 PF02779 Transketolase, pyrimidine binding domain XFC3_03530 PF02780 Transketolase, C-terminal domain XFC3_03530 PF13292 1-deoxy-D-xylulose-5-phosphate synthase XFC3_03535 PF02565 Recombination protein O C terminal XFC3_03535 PF11967 Recombination protein O N terminal XFC3_03540 PF01926 50S ribosome-binding GTPase XFC3_03540 PF07650 KH domain XFC3_03545 PF00035 Double-stranded RNA binding motif XFC3_03545 PF14622 Ribonuclease-III-like XFC3_03550 PF16137 XFC3_03550 XFC3_03555 PF00717 Peptidase S24-like XFC3_03560 PF00009 Elongation factor Tu GTP binding domain XFC3_03560 PF00679 Elongation factor G C-terminus XFC3_03560 PF03144 Elongation factor Tu domain 2 XFC3_03560 PF06421 GTP-binding protein LepA C-terminus XFC3_03565 PF13180 PDZ domain XFC3_03565 PF13365 Trypsin-like peptidase domain XFC3_03570 PF03872 Anti sigma-E protein RseA, N-terminal domain XFC3_03575 PF04542 Sigma-70 region 2 XFC3_03575 PF08281 Sigma-70, region 4 XFC3_03585 PF00593 TonB dependent receptor XFC3_03585 PF07715 TonB-dependent Receptor Plug Domain XFC3_03600 PF00905 Penicillin binding protein transpeptidase domain XFC3_03600 PF00912 Transglycosylase XFC3_03600 PF06832 XFC3_03600 XFC3_03605 PF00011 Hsp20/alpha crystallin family XFC3_03610 PF00226 DnaJ domain XFC3_03610 PF01556 DnaJ C terminal domain XFC3_03615 PF00141 Peroxidase XFC3_03625 PF00768 D-alanyl-D-alanine carboxypeptidase XFC3_03625 PF07943 Penicillin-binding protein 5, C-terminal domain XFC3_03630 PF02622 Uncharacterized ACR, COG1678 XFC3_03635 PF03652 Uncharacterised protein family (UPF0081) XFC3_03640 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XFC3_03640 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XFC3_03645 PF00696 Amino acid kinase family XFC3_03645 PF00742 Homoserine dehydrogenase XFC3_03645 PF03447 Homoserine dehydrogenase, NAD binding domain XFC3_03645 PF13840 ACT domain XFC3_03650 PF00288 GHMP kinases N terminal domain XFC3_03650 PF08544 GHMP kinases C terminal XFC3_03655 PF00291 Pyridoxal-phosphate dependent enzyme XFC3_03655 PF14821 Threonine synthase N terminus XFC3_03660 PF03129 Anticodon binding domain XFC3_03660 PF13393 Histidyl-tRNA synthetase XFC3_03665 PF01371 Trp repressor protein XFC3_03670 PF01634 ATP phosphoribosyltransferase XFC3_03670 PF08029 HisG, C-terminal domain XFC3_03675 PF00815 Histidinol dehydrogenase XFC3_03680 PF00155 Aminotransferase class I and II XFC3_03685 PF00475 Imidazoleglycerol-phosphate dehydratase XFC3_03690 PF00117 Glutamine amidotransferase class-I XFC3_03695 PF00977 Histidine biosynthesis protein XFC3_03700 PF00977 Histidine biosynthesis protein XFC3_03705 PF01502 Phosphoribosyl-AMP cyclohydrolase XFC3_03705 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase XFC3_03715 PF03079 ARD/ARD' family XFC3_03720 PF00596 Class II Aldolase and Adducin N-terminal domain XFC3_03725 PF13520 Amino acid permease XFC3_03730 PF13520 Amino acid permease XFC3_03735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XFC3_03735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XFC3_03740 PF01565 FAD binding domain XFC3_03740 PF02913 FAD linked oxidases, C-terminal domain XFC3_03745 PF01132 Elongation factor P (EF-P) OB domain XFC3_03745 PF08207 Elongation factor P (EF-P) KOW-like domain XFC3_03745 PF09285 Elongation factor P, C-terminal XFC3_03755 PF06325 Ribosomal protein L11 methyltransferase (PrmA) XFC3_03765 PF04591 Protein of unknown function, DUF596 XFC3_03775 PF04591 Protein of unknown function, DUF596 XFC3_03830 PF04830 XFC3_03830 XFC3_03830 PF05590 XFC3_03830 XFC3_03835 PF04591 Protein of unknown function, DUF596 XFC3_03840 PF04830 XFC3_03840 XFC3_03840 PF05590 XFC3_03840 XFC3_03845 PF04591 Protein of unknown function, DUF596 XFC3_03855 PF04591 Protein of unknown function, DUF596 XFC3_03860 PF05590 XFC3_03860 XFC3_03865 PF04591 Protein of unknown function, DUF596 XFC3_03870 PF04830 XFC3_03870 XFC3_03870 PF05590 XFC3_03870 XFC3_03875 PF04591 Protein of unknown function, DUF596 XFC3_03885 PF04591 Protein of unknown function, DUF596 XFC3_03890 PF05590 XFC3_03890 XFC3_03895 PF04591 Protein of unknown function, DUF596 XFC3_03905 PF01694 Rhomboid family XFC3_03910 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel XFC3_03910 PF05036 Sporulation related domain XFC3_03915 PF13406 Transglycosylase SLT domain XFC3_03935 PF02410 Oligomerisation domain XFC3_03940 PF01467 Cytidylyltransferase XFC3_03945 PF06144 DNA polymerase III, delta subunit XFC3_03955 PF00133 tRNA synthetases class I (I, L, M and V) XFC3_03955 PF08264 Anticodon-binding domain of tRNA XFC3_03955 PF13603 Leucyl-tRNA synthetase, Domain 2 XFC3_03960 PF06197 XFC3_03960 XFC3_03965 PF00085 Thioredoxin XFC3_03965 PF14559 Tetratricopeptide repeat XFC3_03965 PF14561 Tetratricopeptide repeat XFC3_03970 PF00719 Inorganic pyrophosphatase XFC3_03975 PF01161 Phosphatidylethanolamine-binding protein XFC3_03980 PF13432 Tetratricopeptide repeat XFC3_03985 PF00575 S1 RNA binding domain XFC3_03985 PF09371 Tex-like protein N-terminal domain XFC3_03985 PF12836 Helix-hairpin-helix motif XFC3_03985 PF16921 XFC3_03985 XFC3_03990 PF00753 Metallo-beta-lactamase superfamily XFC3_03990 PF16123 XFC3_03990 XFC3_04000 PF00075 RNase H XFC3_04005 PF00929 Exonuclease XFC3_04010 PF13274 XFC3_04010 XFC3_04020 PF00114 Pilin (bacterial filament) XFC3_04020 PF07963 Prokaryotic N-terminal methylation motif XFC3_04055 PF11134 XFC3_04055 XFC3_04065 PF11651 P22 coat protein - gene protein 5 XFC3_04075 PF16510 XFC3_04075 XFC3_04080 PF03237 Terminase-like family XFC3_04080 PF17289 XFC3_04080 XFC3_04095 PF16083 XFC3_04095 XFC3_04100 PF00959 Phage lysozyme XFC3_04115 PF03288 Poxvirus D5 protein-like XFC3_04115 PF08706 XFC3_04115 XFC3_04140 PF10991 Protein of unknown function (DUF2815) XFC3_04155 PF08774 VRR-NUC domain XFC3_04170 PF00132 Bacterial transferase hexapeptide (six repeats) XFC3_04180 PF13672 Protein phosphatase 2C XFC3_04195 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XFC3_04200 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family XFC3_04205 PF03583 Secretory lipase XFC3_04210 PF00149 Calcineurin-like phosphoesterase XFC3_04215 PF04379 Protein of unknown function (DUF525) XFC3_04220 PF00398 Ribosomal RNA adenine dimethylase XFC3_04225 PF00929 Exonuclease XFC3_04230 PF01895 PhoU domain XFC3_04235 PF00005 ABC transporter XFC3_04240 PF00528 Binding-protein-dependent transport system inner membrane component XFC3_04245 PF00528 Binding-protein-dependent transport system inner membrane component XFC3_04250 PF12849 PBP superfamily domain XFC3_04255 PF00999 Sodium/hydrogen exchanger family XFC3_04255 PF02254 TrkA-N domain XFC3_04265 PF00593 TonB dependent receptor XFC3_04265 PF07715 TonB-dependent Receptor Plug Domain XFC3_04270 PF01323 DSBA-like thioredoxin domain XFC3_04280 PF00005 ABC transporter XFC3_04280 PF12848 ABC transporter XFC3_04285 PF00589 Phage integrase family XFC3_04290 PF13986 XFC3_04290 XFC3_04315 PF01807 CHC2 zinc finger XFC3_04320 PF05272 XFC3_04320 XFC3_04325 PF05876 XFC3_04325 XFC3_04355 PF00092 von Willebrand factor type A domain XFC3_04355 PF13550 XFC3_04355 XFC3_04390 PF01381 Helix-turn-helix XFC3_04410 PF01134 Glucose inhibited division protein A XFC3_04410 PF13932 GidA associated domain 3 XFC3_04415 PF02698 DUF218 domain XFC3_04420 PF05118 Aspartyl/Asparaginyl beta-hydroxylase XFC3_04425 PF08241 Methyltransferase domain XFC3_04430 PF02649 Type I GTP cyclohydrolase folE2 XFC3_04435 PF00132 Bacterial transferase hexapeptide (six repeats) XFC3_04440 PF00873 AcrB/AcrD/AcrF family XFC3_04445 PF16576 XFC3_04445 XFC3_04455 PF05088 XFC3_04455 XFC3_04455 PF12466 XFC3_04455 XFC3_04460 PF01513 ATP-NAD kinase XFC3_04465 PF06189 XFC3_04465 XFC3_04470 PF07883 Cupin domain XFC3_04480 PF00440 Bacterial regulatory proteins, tetR family XFC3_04485 PF16576 XFC3_04485 XFC3_04490 PF00873 AcrB/AcrD/AcrF family XFC3_04495 PF00106 short chain dehydrogenase XFC3_04500 PF04221 RelB antitoxin XFC3_04515 PF00089 Trypsin XFC3_04525 PF01402 Ribbon-helix-helix protein, copG family XFC3_04530 PF05016 Plasmid stabilisation system protein XFC3_04535 PF03693 Uncharacterised protein family (UPF0156) XFC3_04560 PF05016 Plasmid stabilisation system protein XFC3_04585 PF08401 XFC3_04585 XFC3_04585 PF13662 Toprim domain XFC3_04595 PF01131 DNA topoisomerase XFC3_04595 PF01751 Toprim domain XFC3_04600 PF10502 Signal peptidase, peptidase S26 XFC3_04605 PF02534 Type IV secretory system Conjugative DNA transfer XFC3_04615 PF07996 Type IV secretion system proteins XFC3_04660 PF14518 Iron-containing redox enzyme XFC3_04665 PF11899 XFC3_04665 XFC3_04680 PF13480 Acetyltransferase (GNAT) domain XFC3_04695 PF05016 Plasmid stabilisation system protein XFC3_04700 PF09386 Antitoxin ParD XFC3_04705 PF04255 Protein of unknown function (DUF433) XFC3_04720 PF00239 Resolvase, N terminal domain XFC3_04720 PF02796 Helix-turn-helix domain of resolvase XFC3_04725 PF03692 XFC3_04725 XFC3_04730 PF13662 Toprim domain XFC3_04735 PF12706 Beta-lactamase superfamily domain XFC3_04740 PF09365 XFC3_04740 XFC3_04745 PF00929 Exonuclease XFC3_04745 PF08411 Exonuclease C-terminal XFC3_04760 PF00999 Sodium/hydrogen exchanger family XFC3_04770 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) XFC3_04775 PF01878 EVE domain XFC3_04780 PF01812 5-formyltetrahydrofolate cyclo-ligase family XFC3_04785 PF05164 Cell division protein ZapA XFC3_04795 PF03695 Uncharacterised protein family (UPF0149) XFC3_04800 PF00557 Metallopeptidase family M24 XFC3_04800 PF05195 Aminopeptidase P, N-terminal domain XFC3_04805 PF00293 NUDIX domain XFC3_04810 PF00881 Nitroreductase family XFC3_04815 PF07793 XFC3_04815 XFC3_04820 PF07793 XFC3_04820 XFC3_04835 PF01883 Domain of unknown function DUF59 XFC3_04840 PF01063 Aminotransferase class IV XFC3_04845 PF02954 Bacterial regulatory protein, Fis family XFC3_04850 PF11906 XFC3_04850 XFC3_04855 PF01381 Helix-turn-helix XFC3_04860 PF04932 XFC3_04860 XFC3_04865 PF00535 Glycosyl transferase family 2 XFC3_04875 PF00925 GTP cyclohydrolase II XFC3_04880 PF00578 AhpC/TSA family XFC3_04890 PF00575 S1 RNA binding domain XFC3_04890 PF00773 RNB domain XFC3_04890 PF08206 Ribonuclease B OB domain XFC3_04900 PF00588 SpoU rRNA Methylase family XFC3_04900 PF08032 RNA 2'-O ribose methyltransferase substrate binding XFC3_04905 PF00132 Bacterial transferase hexapeptide (six repeats) XFC3_04910 PF01227 GTP cyclohydrolase I XFC3_04930 PF12805 XFC3_04930 XFC3_04930 PF13515 XFC3_04930 XFC3_04940 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain XFC3_04940 PF02843 Phosphoribosylglycinamide synthetase, C domain XFC3_04940 PF02844 Phosphoribosylglycinamide synthetase, N domain XFC3_04945 PF01808 AICARFT/IMPCHase bienzyme XFC3_04945 PF02142 MGS-like domain XFC3_04955 PF00588 SpoU rRNA Methylase family XFC3_04960 PF13698 XFC3_04960 XFC3_04965 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XFC3_04965 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XFC3_04970 PF01555 DNA methylase XFC3_04980 PF00561 alpha/beta hydrolase fold XFC3_04985 PF03692 XFC3_04985 XFC3_04990 PF00795 Carbon-nitrogen hydrolase XFC3_04990 PF02540 NAD synthase XFC3_04995 PF02091 Glycyl-tRNA synthetase alpha subunit XFC3_05000 PF02092 XFC3_05000 XFC3_05000 PF05746 DALR anticodon binding domain XFC3_05010 PF03544 Gram-negative bacterial TonB protein C-terminal XFC3_05015 PF02951 Prokaryotic glutathione synthetase, N-terminal domain XFC3_05015 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain XFC3_05020 PF00072 Response regulator receiver domain XFC3_05025 PF01584 CheW-like domain XFC3_05030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XFC3_05035 PF00072 Response regulator receiver domain XFC3_05035 PF01584 CheW-like domain XFC3_05035 PF01627 Hpt domain XFC3_05035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFC3_05035 PF02895 Signal transducing histidine kinase, homodimeric domain XFC3_05040 PF01339 CheB methylesterase XFC3_05045 PF01584 CheW-like domain XFC3_05050 PF13522 Glutamine amidotransferase domain XFC3_05060 PF05036 Sporulation related domain XFC3_05065 PF08245 Mur ligase middle domain XFC3_05070 PF06903 XFC3_05070 XFC3_05075 PF01432 Peptidase family M3 XFC3_05080 PF00216 Bacterial DNA-binding protein XFC3_05090 PF08332 Calcium/calmodulin dependent protein kinase II Association XFC3_05095 PF01625 Peptide methionine sulfoxide reductase XFC3_05100 PF00375 Sodium:dicarboxylate symporter family XFC3_05105 PF00456 Transketolase, thiamine diphosphate binding domain XFC3_05105 PF02779 Transketolase, pyrimidine binding domain XFC3_05105 PF02780 Transketolase, C-terminal domain XFC3_05110 PF02527 rRNA small subunit methyltransferase G XFC3_05115 PF01648 4'-phosphopantetheinyl transferase superfamily XFC3_05120 PF03372 Endonuclease/Exonuclease/phosphatase family XFC3_05155 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain XFC3_05155 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain XFC3_05160 PF00890 FAD binding domain XFC3_05160 PF02910 Fumarate reductase flavoprotein C-term XFC3_05165 PF02445 Quinolinate synthetase A protein XFC3_05175 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XFC3_05175 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XFC3_05180 PF01371 Trp repressor protein XFC3_05185 PF03358 NADPH-dependent FMN reductase XFC3_05190 PF14518 Iron-containing redox enzyme XFC3_05205 PF00425 chorismate binding enzyme XFC3_05215 PF01026 TatD related DNase XFC3_05220 PF14279 XFC3_05220 XFC3_05230 PF00448 SRP54-type protein, GTPase domain XFC3_05230 PF02881 SRP54-type protein, helical bundle domain XFC3_05235 PF00730 HhH-GPD superfamily base excision DNA repair protein XFC3_05235 PF14815 NUDIX domain XFC3_05240 PF04362 Bacterial Fe(2+) trafficking XFC3_05245 PF01709 Transcriptional regulator XFC3_05250 PF02075 Crossover junction endodeoxyribonuclease RuvC XFC3_05255 PF01330 RuvA N terminal domain XFC3_05255 PF07499 RuvA, C-terminal domain XFC3_05255 PF14520 Helix-hairpin-helix domain XFC3_05260 PF02705 XFC3_05260 XFC3_05265 PF05491 Holliday junction DNA helicase ruvB C-terminus XFC3_05265 PF05496 Holliday junction DNA helicase ruvB N-terminus XFC3_05270 PF03061 Thioesterase superfamily XFC3_05275 PF01618 XFC3_05275 XFC3_05280 PF02472 Biopolymer transport protein ExbD/TolR XFC3_05285 PF13103 TonB C terminal XFC3_05290 PF04052 TolB amino-terminal domain XFC3_05290 PF07676 WD40-like Beta Propeller Repeat XFC3_05295 PF00691 OmpA family XFC3_05300 PF13525 Outer membrane lipoprotein XFC3_05300 PF16331 XFC3_05300 XFC3_05305 PF04055 Radical SAM superfamily XFC3_05305 PF13394 4Fe-4S single cluster domain XFC3_05310 PF00300 Histidine phosphatase superfamily (branch 1) XFC3_05315 PF04493 Endonuclease V XFC3_05320 PF00854 POT family XFC3_05325 PF00255 Glutathione peroxidase XFC3_05330 PF00175 Oxidoreductase NAD-binding domain XFC3_05330 PF00970 Oxidoreductase FAD-binding domain XFC3_05340 PF10459 Peptidase S46 XFC3_05345 PF00300 Histidine phosphatase superfamily (branch 1) XFC3_05370 PF02486 XFC3_05370 XFC3_05395 PF05707 Zonular occludens toxin (Zot) XFC3_05405 PF12375 XFC3_05405 XFC3_05410 PF12472 XFC3_05410 XFC3_05435 PF02486 XFC3_05435 XFC3_05460 PF05707 Zonular occludens toxin (Zot) XFC3_05480 PF05707 Zonular occludens toxin (Zot) XFC3_05485 PF10734 XFC3_05485 XFC3_05510 PF06508 Queuosine biosynthesis protein QueC XFC3_05515 PF00152 tRNA synthetases class II (D, K and N) XFC3_05515 PF01336 OB-fold nucleic acid binding domain XFC3_05515 PF02938 GAD domain XFC3_05520 PF05681 XFC3_05520 XFC3_05520 PF05683 Fumarase C-terminus XFC3_05525 PF03572 Peptidase family S41 XFC3_05525 PF14684 Tricorn protease C1 domain XFC3_05530 PF03572 Peptidase family S41 XFC3_05530 PF14684 Tricorn protease C1 domain XFC3_05535 PF00082 Subtilase family XFC3_05535 PF03797 Autotransporter beta-domain XFC3_05535 PF12951 XFC3_05535 XFC3_05565 PF07484 Phage Tail Collar Domain XFC3_05570 PF11041 XFC3_05570 XFC3_05575 PF04865 XFC3_05575 XFC3_05605 PF04014 Antidote-toxin recognition MazE XFC3_05610 PF01850 PIN domain XFC3_05620 PF10876 XFC3_05620 XFC3_05625 PF11681 XFC3_05625 XFC3_05650 PF13262 XFC3_05650 XFC3_05660 PF09950 XFC3_05660 XFC3_05670 PF09979 XFC3_05670 XFC3_05675 PF04233 XFC3_05675 XFC3_05680 PF05973 XFC3_05680 XFC3_05685 PF13744 Helix-turn-helix domain XFC3_05690 PF06381 XFC3_05690 XFC3_05695 PF17289 XFC3_05695 XFC3_05715 PF16083 XFC3_05715 XFC3_05720 PF00959 Phage lysozyme XFC3_05725 PF05015 Plasmid maintenance system killer protein XFC3_05730 PF01381 Helix-turn-helix XFC3_05750 PF07120 XFC3_05750 XFC3_05755 PF07120 XFC3_05755 XFC3_05760 PF02498 XFC3_05760 XFC3_05800 PF00717 Peptidase S24-like XFC3_05810 PF07798 XFC3_05810 XFC3_05825 PF07603 XFC3_05825 XFC3_05850 PF10065 XFC3_05850 XFC3_05855 PF03837 XFC3_05855 XFC3_05860 PF09588 YqaJ-like viral recombinase domain XFC3_05865 PF02498 XFC3_05865 XFC3_05870 PF02498 XFC3_05870 XFC3_05875 PF03374 XFC3_05875 XFC3_05875 PF09669 XFC3_05875 XFC3_05880 PF00436 Single-strand binding protein family XFC3_05885 PF13986 XFC3_05885 XFC3_05890 PF00589 Phage integrase family XFC3_05895 PF00512 His Kinase A (phospho-acceptor) domain XFC3_05895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFC3_05900 PF00072 Response regulator receiver domain XFC3_05900 PF00158 Sigma-54 interaction domain XFC3_05900 PF02954 Bacterial regulatory protein, Fis family XFC3_05905 PF01131 DNA topoisomerase XFC3_05910 PF00909 Ammonium Transporter Family XFC3_05915 PF00543 Nitrogen regulatory protein P-II XFC3_05920 PF00120 Glutamine synthetase, catalytic domain XFC3_05920 PF03951 Glutamine synthetase, beta-Grasp domain XFC3_05925 PF02673 XFC3_05925 XFC3_05930 PF04264 YceI-like domain XFC3_05935 PF06258 XFC3_05935 XFC3_05940 PF09916 XFC3_05940 XFC3_05950 PF07055 Enoyl reductase FAD binding domain XFC3_05950 PF12241 Trans-2-enoyl-CoA reductase catalytic region XFC3_05950 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase XFC3_05955 PF13899 Thioredoxin-like XFC3_05960 PF03109 XFC3_05960 XFC3_05965 PF02036 SCP-2 sterol transfer family XFC3_05970 PF00551 Formyl transferase XFC3_05975 PF02492 CobW/HypB/UreG, nucleotide-binding domain XFC3_05975 PF07683 Cobalamin synthesis protein cobW C-terminal domain XFC3_05980 PF02129 X-Pro dipeptidyl-peptidase (S15 family) XFC3_05985 PF03969 AFG1-like ATPase XFC3_05990 PF02566 OsmC-like protein XFC3_05995 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family XFC3_06000 PF00595 PDZ domain (Also known as DHR or GLGF) XFC3_06000 PF03572 Peptidase family S41 XFC3_06000 PF11818 XFC3_06000 XFC3_06005 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain XFC3_06005 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain XFC3_06010 PF00205 Thiamine pyrophosphate enzyme, central domain XFC3_06010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XFC3_06010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XFC3_06015 PF13710 ACT domain XFC3_06020 PF00291 Pyridoxal-phosphate dependent enzyme XFC3_06025 PF00682 HMGL-like XFC3_06025 PF08502 LeuA allosteric (dimerisation) domain XFC3_06030 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XFC3_06030 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XFC3_06035 PF01783 Ribosomal L32p protein family XFC3_06040 PF02620 XFC3_06040 XFC3_06045 PF13231 XFC3_06045 XFC3_06050 PF07726 ATPase family associated with various cellular activities (AAA) XFC3_06055 PF01882 XFC3_06055 XFC3_06060 PF01841 Transglutaminase-like superfamily XFC3_06060 PF11992 XFC3_06060 XFC3_06065 PF03843 XFC3_06065 XFC3_06070 PF01230 HIT domain XFC3_06075 PF02132 RecR protein XFC3_06075 PF13662 Toprim domain XFC3_06080 PF02575 YbaB/EbfC DNA-binding family XFC3_06085 PF12169 DNA polymerase III subunits gamma and tau domain III XFC3_06085 PF12170 DNA polymerase III tau subunit V interacting with alpha XFC3_06085 PF13177 DNA polymerase III, delta subunit XFC3_06110 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus XFC3_06110 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus XFC3_06115 PF02556 Preprotein translocase subunit SecB XFC3_06120 PF00581 Rhodanese-like domain XFC3_06130 PF02602 Uroporphyrinogen-III synthase HemD XFC3_06135 PF04375 XFC3_06135 XFC3_06140 PF07219 XFC3_06140 XFC3_06145 PF02237 Biotin protein ligase C terminal domain XFC3_06145 PF03099 Biotin/lipoate A/B protein ligase family XFC3_06145 PF08279 HTH domain XFC3_06150 PF03309 Type III pantothenate kinase XFC3_06155 PF05036 Sporulation related domain XFC3_06190 PF05930 Prophage CP4-57 regulatory protein (AlpA) XFC3_06195 PF13614 AAA domain XFC3_06210 PF11198 XFC3_06210 XFC3_06225 PF08900 XFC3_06225 XFC3_06230 PF11358 XFC3_06230 XFC3_06235 PF00436 Single-strand binding protein family XFC3_06245 PF00145 C-5 cytosine-specific DNA methylase XFC3_06290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XFC3_06290 PF03466 LysR substrate binding domain XFC3_06295 PF07883 Cupin domain XFC3_06300 PF07883 Cupin domain XFC3_06305 PF02627 Carboxymuconolactone decarboxylase family XFC3_06310 PF07690 Major Facilitator Superfamily XFC3_06320 PF11284 XFC3_06320 XFC3_06325 PF01507 Phosphoadenosine phosphosulfate reductase family XFC3_06335 PF12101 XFC3_06335 XFC3_06340 PF11679 XFC3_06340 XFC3_06360 PF12553 XFC3_06360 XFC3_06365 PF08808 XFC3_06365 XFC3_06375 PF07514 Putative helicase XFC3_06375 PF07515 Protein of unknown function (DUF1528) XFC3_06380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XFC3_06380 PF03466 LysR substrate binding domain XFC3_06390 PF05448 Acetyl xylan esterase (AXE1) XFC3_06395 PF07690 Major Facilitator Superfamily XFC3_06400 PF01872 RibD C-terminal domain XFC3_06405 PF13460 NADH(P)-binding XFC3_06410 PF00107 Zinc-binding dehydrogenase XFC3_06410 PF08240 Alcohol dehydrogenase GroES-like domain XFC3_06415 PF01738 Dienelactone hydrolase family XFC3_06420 PF00106 short chain dehydrogenase XFC3_06425 PF07859 alpha/beta hydrolase fold XFC3_06430 PF08450 SMP-30/Gluconolaconase/LRE-like region XFC3_06435 PF00106 short chain dehydrogenase XFC3_06440 PF07995 Glucose / Sorbosone dehydrogenase XFC3_06445 PF12706 Beta-lactamase superfamily domain XFC3_06455 PF03807 NADP oxidoreductase coenzyme F420-dependent XFC3_06460 PF10012 XFC3_06460 XFC3_06465 PF07995 Glucose / Sorbosone dehydrogenase XFC3_06470 PF00107 Zinc-binding dehydrogenase XFC3_06470 PF08240 Alcohol dehydrogenase GroES-like domain XFC3_06475 PF03358 NADPH-dependent FMN reductase XFC3_06480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XFC3_06485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XFC3_06485 PF03466 LysR substrate binding domain XFC3_06490 PF07690 Major Facilitator Superfamily XFC3_06495 PF00107 Zinc-binding dehydrogenase XFC3_06495 PF08240 Alcohol dehydrogenase GroES-like domain XFC3_06515 PF00248 Aldo/keto reductase family XFC3_06525 PF13560 Helix-turn-helix domain XFC3_06530 PF03466 LysR substrate binding domain XFC3_06535 PF00589 Phage integrase family XFC3_06535 PF13356 Domain of unknown function (DUF4102) XFC3_06535 PF14659 Phage integrase, N-terminal SAM-like domain XFC3_06545 PF01168 Alanine racemase, N-terminal domain XFC3_06550 PF00488 MutS domain V XFC3_06550 PF01624 MutS domain I XFC3_06550 PF05188 MutS domain II XFC3_06550 PF05190 MutS family domain IV XFC3_06550 PF05192 MutS domain III XFC3_06555 PF00912 Transglycosylase XFC3_06560 PF01430 Hsp33 protein XFC3_06575 PF01042 Endoribonuclease L-PSP XFC3_06580 PF03706 XFC3_06580 XFC3_06580 PF09924 Uncharacterized conserved protein (DUF2156) XFC3_06585 PF12796 Ankyrin repeats (3 copies) XFC3_06595 PF00109 Beta-ketoacyl synthase, N-terminal domain XFC3_06595 PF02801 Beta-ketoacyl synthase, C-terminal domain XFC3_06600 PF13723 XFC3_06600 XFC3_06605 PF00535 Glycosyl transferase family 2 XFC3_06615 PF00535 Glycosyl transferase family 2 XFC3_06635 PF00437 Type II/IV secretion system protein XFC3_06645 PF04338 Protein of unknown function, DUF481 XFC3_06650 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain XFC3_06650 PF03900 Porphobilinogen deaminase, C-terminal domain XFC3_06655 PF00072 Response regulator receiver domain XFC3_06655 PF04397 LytTr DNA-binding domain XFC3_06660 PF06580 XFC3_06660 XFC3_06665 PF02230 Phospholipase/Carboxylesterase XFC3_06670 PF13632 Glycosyl transferase family group 2 XFC3_06675 PF00144 Beta-lactamase XFC3_06685 PF01022 Bacterial regulatory protein, arsR family XFC3_06685 PF08241 Methyltransferase domain XFC3_06700 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family XFC3_06705 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) XFC3_06710 PF00294 pfkB family carbohydrate kinase XFC3_06715 PF07690 Major Facilitator Superfamily XFC3_06720 PF09831 XFC3_06720 XFC3_06725 PF04102 SlyX XFC3_06730 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XFC3_06730 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XFC3_06730 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XFC3_06735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XFC3_06735 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XFC3_06740 PF00255 Glutathione peroxidase XFC3_06750 PF00005 ABC transporter XFC3_06815 PF10876 XFC3_06815 XFC3_06820 PF11681 XFC3_06820 XFC3_06845 PF13262 XFC3_06845 XFC3_06855 PF09950 XFC3_06855 XFC3_06865 PF09979 XFC3_06865 XFC3_06870 PF04233 XFC3_06870 XFC3_06880 PF17289 XFC3_06880 XFC3_06900 PF16083 XFC3_06900 XFC3_06905 PF00959 Phage lysozyme XFC3_06910 PF14384 XFC3_06910 XFC3_06915 PF04365 Protein of unknown function (DUF497) XFC3_06935 PF07120 XFC3_06935 XFC3_06945 PF00436 Single-strand binding protein family XFC3_06950 PF13986 XFC3_06950 XFC3_06955 PF00589 Phage integrase family XFC3_06960 PF00206 Lyase XFC3_06960 PF10415 Fumarase C C-terminus XFC3_06970 PF00206 Lyase XFC3_06970 PF08328 Adenylosuccinate lyase C-terminal XFC3_06985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XFC3_06985 PF00364 Biotin-requiring enzyme XFC3_06985 PF02817 e3 binding domain XFC3_06995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XFC3_06995 PF07992 Pyridine nucleotide-disulphide oxidoreductase XFC3_07000 PF05433 XFC3_07000 XFC3_07005 PF00899 ThiF family XFC3_07015 PF00027 Cyclic nucleotide-binding domain XFC3_07015 PF00325 Bacterial regulatory proteins, crp family XFC3_07020 PF02675 S-adenosylmethionine decarboxylase XFC3_07025 PF03232 XFC3_07025 XFC3_07030 PF00572 Ribosomal protein L13 XFC3_07035 PF00380 Ribosomal protein S9/S16 XFC3_07040 PF00285 Citrate synthase XFC3_07045 PF01197 Ribosomal protein L31 XFC3_07050 PF00814 Glycoprotease family XFC3_07055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XFC3_07055 PF03466 LysR substrate binding domain XFC3_07060 PF07992 Pyridine nucleotide-disulphide oxidoreductase XFC3_07060 PF13192 Thioredoxin domain XFC3_07065 PF00578 AhpC/TSA family XFC3_07070 PF03895 YadA-like C-terminal region XFC3_07070 PF05658 Head domain of trimeric autotransporter adhesin XFC3_07070 PF05662 Coiled stalk of trimeric autotransporter adhesin XFC3_07075 PF00263 XFC3_07075 XFC3_07075 PF03958 Bacterial type II/III secretion system short domain XFC3_07085 PF10741 XFC3_07085 XFC3_07090 PF05137 XFC3_07090 XFC3_07095 PF03934 Type II secretion system (T2SS), protein K XFC3_07105 PF07963 Prokaryotic N-terminal methylation motif XFC3_07115 PF08334 Type II secretion system (T2SS), protein G XFC3_07120 PF00482 Type II secretion system (T2SS), protein F XFC3_07125 PF00437 Type II/IV secretion system protein XFC3_07125 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XFC3_07130 PF03895 YadA-like C-terminal region XFC3_07130 PF05658 Head domain of trimeric autotransporter adhesin XFC3_07130 PF05662 Coiled stalk of trimeric autotransporter adhesin XFC3_07140 PF03547 XFC3_07140 XFC3_07150 PF05175 Methyltransferase small domain XFC3_07155 PF00561 alpha/beta hydrolase fold XFC3_07160 PF07238 PilZ domain XFC3_07165 PF07793 XFC3_07165 XFC3_07170 PF04055 Radical SAM superfamily XFC3_07170 PF06969 HemN C-terminal domain XFC3_07175 PF01725 Ham1 family XFC3_07180 PF01138 3' exoribonuclease family, domain 1 XFC3_07180 PF03725 3' exoribonuclease family, domain 2 XFC3_07185 PF03755 XFC3_07185 XFC3_07185 PF08340 XFC3_07185 XFC3_07190 PF00625 Guanylate kinase XFC3_07195 PF01192 RNA polymerase Rpb6 XFC3_07200 PF00009 Elongation factor Tu GTP binding domain XFC3_07200 PF01583 Adenylylsulphate kinase XFC3_07205 PF01507 Phosphoadenosine phosphosulfate reductase family XFC3_07210 PF00175 Oxidoreductase NAD-binding domain XFC3_07210 PF00258 Flavodoxin XFC3_07210 PF00667 FAD binding domain XFC3_07215 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XFC3_07215 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XFC3_07220 PF01507 Phosphoadenosine phosphosulfate reductase family XFC3_07225 PF00593 TonB dependent receptor XFC3_07225 PF07715 TonB-dependent Receptor Plug Domain XFC3_07230 PF02643 Uncharacterized ACR, COG1430 XFC3_07235 PF13369 XFC3_07235 XFC3_07235 PF13371 Tetratricopeptide repeat XFC3_07240 PF00816 H-NS histone family XFC3_07245 PF01047 MarR family XFC3_07255 PF13899 Thioredoxin-like XFC3_07260 PF01433 Peptidase family M1 XFC3_07260 PF09127 Leukotriene A4 hydrolase, C-terminal XFC3_07265 PF01209 ubiE/COQ5 methyltransferase family XFC3_07270 PF00589 Phage integrase family XFC3_07275 PF13986 XFC3_07275 XFC3_07280 PF00176 SNF2 family N-terminal domain XFC3_07290 PF08774 VRR-NUC domain XFC3_07300 PF02498 XFC3_07300 XFC3_07305 PF10991 Protein of unknown function (DUF2815) XFC3_07310 PF10926 XFC3_07310 XFC3_07365 PF01381 Helix-turn-helix XFC3_07400 PF03288 Poxvirus D5 protein-like XFC3_07400 PF08706 XFC3_07400 XFC3_07410 PF00959 Phage lysozyme XFC3_07415 PF16083 XFC3_07415 XFC3_07430 PF07471 Phage DNA packaging protein Nu1 XFC3_07435 PF05876 XFC3_07435 XFC3_07445 PF05136 XFC3_07445 XFC3_07450 PF04586 XFC3_07450 XFC3_07450 PF05065 Phage capsid family XFC3_07475 PF04717 Phage-related baseplate assembly protein XFC3_07480 PF01381 Helix-turn-helix XFC3_07485 PF13744 Helix-turn-helix domain XFC3_07490 PF05973 XFC3_07490 XFC3_07495 PF04965 Gene 25-like lysozyme XFC3_07500 PF04865 XFC3_07500 XFC3_07505 PF09684 XFC3_07505 XFC3_07515 PF04984 Phage tail sheath protein XFC3_07515 PF17482 XFC3_07515 XFC3_07520 PF04985 XFC3_07520 XFC3_07525 PF10109 XFC3_07525 XFC3_07530 PF10145 XFC3_07530 XFC3_07535 PF06995 XFC3_07535 XFC3_07540 PF05489 Phage Tail Protein X XFC3_07545 PF05954 Phage late control gene D protein (GPD) XFC3_07550 PF10009 XFC3_07550 XFC3_07555 PF00004 ATPase family associated with various cellular activities (AAA) XFC3_07555 PF07724 AAA domain (Cdc48 subfamily) XFC3_07555 PF10431 C-terminal, D2-small domain, of ClpB protein XFC3_07560 PF00227 Proteasome subunit XFC3_07565 PF00589 Phage integrase family XFC3_07565 PF02899 Phage integrase, N-terminal SAM-like domain XFC3_07570 PF04340 Protein of unknown function, DUF484 XFC3_07575 PF01678 Diaminopimelate epimerase XFC3_07580 PF00326 Prolyl oligopeptidase family XFC3_07580 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XFC3_07585 PF00856 SET domain XFC3_07590 PF02082 Transcriptional regulator XFC3_07595 PF01458 Uncharacterized protein family (UPF0051) XFC3_07600 PF00005 ABC transporter XFC3_07605 PF01458 Uncharacterized protein family (UPF0051) XFC3_07610 PF00266 Aminotransferase class-V XFC3_07615 PF00355 Rieske [2Fe-2S] domain XFC3_07620 PF00534 Glycosyl transferases group 1 XFC3_07620 PF13439 Glycosyltransferase Family 4 XFC3_07625 PF01522 Polysaccharide deacetylase XFC3_07630 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XFC3_07630 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XFC3_07630 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XFC3_07630 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XFC3_07635 PF01039 Carboxyl transferase domain XFC3_07640 PF01979 Amidohydrolase family XFC3_07645 PF01380 SIS domain XFC3_07650 PF00356 Bacterial regulatory proteins, lacI family XFC3_07650 PF13377 Periplasmic binding protein-like domain XFC3_07655 PF07690 Major Facilitator Superfamily XFC3_07665 PF02685 Glucokinase XFC3_07675 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase XFC3_07680 PF13561 Enoyl-(Acyl carrier protein) reductase XFC3_07685 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XFC3_07690 PF00072 Response regulator receiver domain XFC3_07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFC3_07695 PF02537 XFC3_07695 XFC3_07700 PF05496 Holliday junction DNA helicase ruvB N-terminus XFC3_07700 PF12002 MgsA AAA+ ATPase C terminal XFC3_07700 PF16193 XFC3_07700 XFC3_07705 PF03548 Outer membrane lipoprotein carrier protein LolA XFC3_07710 PF01841 Transglutaminase-like superfamily XFC3_07710 PF12969 Domain of Unknown Function with PDB structure (DUF3857) XFC3_07715 PF01580 FtsK/SpoIIIE family XFC3_07715 PF09397 Ftsk gamma domain XFC3_07715 PF13491 XFC3_07715 XFC3_07720 PF07992 Pyridine nucleotide-disulphide oxidoreductase XFC3_07725 PF04339 XFC3_07725 XFC3_07730 PF03588 Leucyl/phenylalanyl-tRNA protein transferase XFC3_07735 PF01176 Translation initiation factor 1A / IF-1 XFC3_07740 PF00004 ATPase family associated with various cellular activities (AAA) XFC3_07740 PF02861 Clp amino terminal domain XFC3_07740 PF07724 AAA domain (Cdc48 subfamily) XFC3_07740 PF10431 C-terminal, D2-small domain, of ClpB protein XFC3_07745 PF02617 ATP-dependent Clp protease adaptor protein ClpS XFC3_07750 PF00293 NUDIX domain XFC3_07755 PF03054 tRNA methyl transferase XFC3_07760 PF04356 Protein of unknown function (DUF489) XFC3_07765 PF03372 Endonuclease/Exonuclease/phosphatase family XFC3_07770 PF01323 DSBA-like thioredoxin domain XFC3_07775 PF13462 Thioredoxin XFC3_07790 PF01926 50S ribosome-binding GTPase XFC3_07795 PF04107 Glutamate-cysteine ligase family 2(GCS2) XFC3_07800 PF00202 Aminotransferase class-III XFC3_07805 PF00520 Ion transport protein XFC3_07810 PF00589 Phage integrase family XFC3_07810 PF02899 Phage integrase, N-terminal SAM-like domain XFC3_07815 PF10411 Disulfide bond isomerase protein N-terminus XFC3_07815 PF13098 Thioredoxin-like domain XFC3_07820 PF02769 AIR synthase related protein, C-terminal domain XFC3_07820 PF13507 CobB/CobQ-like glutamine amidotransferase domain XFC3_07830 PF13986 XFC3_07830 XFC3_07855 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XFC3_07860 PF01722 BolA-like protein XFC3_07865 PF00571 CBS domain XFC3_07865 PF01380 SIS domain XFC3_07870 PF08282 haloacid dehalogenase-like hydrolase XFC3_07875 PF06835 Lipopolysaccharide-assembly, LptC-related XFC3_07880 PF03968 OstA-like protein XFC3_07885 PF00005 ABC transporter XFC3_07885 PF12399 Branched-chain amino acid ATP-binding cassette transporter XFC3_07890 PF00309 XFC3_07890 XFC3_07890 PF04552 Sigma-54, DNA binding domain XFC3_07890 PF04963 Sigma-54 factor, core binding domain XFC3_07895 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XFC3_07900 PF02603 HPr Serine kinase N terminus XFC3_07900 PF07475 HPr Serine kinase C-terminal domain XFC3_07905 PF03668 XFC3_07905 XFC3_07910 PF03610 PTS system fructose IIA component XFC3_07915 PF00381 PTS HPr component phosphorylation site XFC3_07920 PF00391 PEP-utilising enzyme, mobile domain XFC3_07920 PF02896 PEP-utilising enzyme, TIM barrel domain XFC3_07920 PF05524 PEP-utilising enzyme, N-terminal XFC3_07925 PF00571 CBS domain XFC3_07925 PF03448 MgtE intracellular N domain XFC3_07935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XFC3_07940 PF00999 Sodium/hydrogen exchanger family XFC3_07945 PF13649 Methyltransferase domain XFC3_07950 PF00436 Single-strand binding protein family XFC3_07955 PF00348 Polyprenyl synthetase XFC3_07960 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XFC3_07960 PF06481 COX Aromatic Rich Motif XFC3_07965 PF00115 Cytochrome C and Quinol oxidase polypeptide I XFC3_07970 PF00510 Cytochrome c oxidase subunit III XFC3_07975 PF03626 XFC3_07975 XFC3_07980 PF02347 Glycine cleavage system P-protein XFC3_07990 PF10142 PhoPQ-activated pathogenicity-related protein XFC3_07995 PF00270 DEAD/DEAH box helicase XFC3_07995 PF00271 Helicase conserved C-terminal domain XFC3_07995 PF04408 Helicase associated domain (HA2) XFC3_07995 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold XFC3_07995 PF11898 XFC3_07995 XFC3_08000 PF00210 Ferritin-like domain XFC3_08005 PF00270 DEAD/DEAH box helicase XFC3_08005 PF00271 Helicase conserved C-terminal domain XFC3_08005 PF00570 HRDC domain XFC3_08005 PF09382 RQC domain XFC3_08005 PF16124 XFC3_08005 XFC3_08015 PF00296 Luciferase-like monooxygenase XFC3_08020 PF13481 AAA domain XFC3_08020 PF13541 Subunit ChlI of Mg-chelatase XFC3_08025 PF00290 Tryptophan synthase alpha chain XFC3_08030 PF00291 Pyridoxal-phosphate dependent enzyme XFC3_08035 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase XFC3_08040 PF01416 tRNA pseudouridine synthase XFC3_08050 PF01118 Semialdehyde dehydrogenase, NAD binding domain XFC3_08050 PF02774 Semialdehyde dehydrogenase, dimerisation domain XFC3_08055 PF01264 Chorismate synthase XFC3_08060 PF05175 Methyltransferase small domain XFC3_08070 PF02666 XFC3_08070 XFC3_08080 PF01464 Transglycosylase SLT domain XFC3_08080 PF14718 Soluble lytic murein transglycosylase L domain XFC3_08085 PF01743 Poly A polymerase head domain XFC3_08085 PF01966 HD domain XFC3_08085 PF12627 Probable RNA and SrmB- binding site of polymerase A XFC3_08090 PF00753 Metallo-beta-lactamase superfamily XFC3_08095 PF01040 UbiA prenyltransferase family XFC3_08100 PF02628 XFC3_08100 XFC3_08105 PF00155 Aminotransferase class I and II XFC3_08110 PF12697 Alpha/beta hydrolase family XFC3_08120 PF01047 MarR family XFC3_08125 PF00521 DNA gyrase/topoisomerase IV, subunit A XFC3_08125 PF03989 DNA gyrase C-terminal domain, beta-propeller XFC3_08130 PF00140 Sigma-70 factor, region 1 XFC3_08130 PF03979 Sigma-70 factor, region 1 XFC3_08130 PF04539 Sigma-70 region 3 XFC3_08130 PF04542 Sigma-70 region 2 XFC3_08130 PF04545 Sigma-70, region 4 XFC3_08130 PF04546 Sigma-70, non-essential region XFC3_08135 PF03279 XFC3_08135 XFC3_08140 PF00005 ABC transporter XFC3_08140 PF12857 XFC3_08140 XFC3_08145 PF00528 Binding-protein-dependent transport system inner membrane component XFC3_08150 PF00528 Binding-protein-dependent transport system inner membrane component XFC3_08155 PF13531 Bacterial extracellular solute-binding protein XFC3_08165 PF03932 CutC family XFC3_08175 PF00749 tRNA synthetases class I (E and Q), catalytic domain XFC3_08175 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain XFC3_08180 PF01243 Pyridoxamine 5'-phosphate oxidase XFC3_08180 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region XFC3_08190 PF01202 Shikimate kinase XFC3_08195 PF01761 3-dehydroquinate synthase XFC3_08200 PF01208 Uroporphyrinogen decarboxylase (URO-D) XFC3_08210 PF04264 YceI-like domain XFC3_08215 PF01292 Prokaryotic cytochrome b561 XFC3_08220 PF04264 YceI-like domain XFC3_08225 PF00730 HhH-GPD superfamily base excision DNA repair protein XFC3_08240 PF00583 Acetyltransferase (GNAT) family XFC3_08245 PF03775 Septum formation inhibitor MinC, C-terminal domain XFC3_08245 PF05209 Septum formation inhibitor MinC, N-terminal domain XFC3_08250 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XFC3_08255 PF03776 Septum formation topological specificity factor MinE XFC3_08270 PF02824 TGS domain XFC3_08270 PF04607 Region found in RelA / SpoT proteins XFC3_08270 PF13291 ACT domain XFC3_08270 PF13328 HD domain XFC3_08275 PF02547 Queuosine biosynthesis protein XFC3_08280 PF01098 XFC3_08280 XFC3_08285 PF00905 Penicillin binding protein transpeptidase domain XFC3_08285 PF03717 Penicillin-binding Protein dimerisation domain XFC3_08290 PF04093 XFC3_08290 XFC3_08300 PF06723 MreB/Mbl protein XFC3_08340 PF02405 XFC3_08340 XFC3_08345 PF00005 ABC transporter XFC3_08350 PF02470 XFC3_08350 XFC3_08355 PF03886 Protein of unknown function (DUF330) XFC3_08360 PF13532 2OG-Fe(II) oxygenase superfamily XFC3_08365 PF01946 Thi4 family XFC3_08365 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase XFC3_08370 PF08450 SMP-30/Gluconolaconase/LRE-like region XFC3_08375 PF01713 Smr domain XFC3_08380 PF02542 YgbB family XFC3_08385 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase XFC3_08390 PF04977 Septum formation initiator XFC3_08395 PF00113 Enolase, C-terminal TIM barrel domain XFC3_08395 PF03952 Enolase, N-terminal domain XFC3_08400 PF00793 DAHP synthetase I family XFC3_08405 PF00117 Glutamine amidotransferase class-I XFC3_08405 PF06418 CTP synthase N-terminus XFC3_08415 PF00204 DNA gyrase B XFC3_08415 PF00986 DNA gyrase B subunit, carboxyl terminus XFC3_08415 PF01751 Toprim domain XFC3_08415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFC3_08430 PF00450 Serine carboxypeptidase XFC3_08435 PF00571 CBS domain XFC3_08435 PF01595 XFC3_08435 XFC3_08435 PF03471 Transporter associated domain XFC3_08440 PF04286 XFC3_08440 XFC3_08445 PF05597 XFC3_08445 XFC3_08455 PF16697 XFC3_08455 XFC3_08460 PF04359 Protein of unknown function (DUF493) XFC3_08465 PF03099 Biotin/lipoate A/B protein ligase family XFC3_08470 PF04055 Radical SAM superfamily XFC3_08470 PF16881 XFC3_08470 XFC3_08475 PF00553 Cellulose binding domain XFC3_08475 PF01341 Glycosyl hydrolases family 6 XFC3_08480 PF03797 Autotransporter beta-domain XFC3_08485 PF00293 NUDIX domain XFC3_08490 PF06853 XFC3_08490 XFC3_08495 PF03618 XFC3_08495 XFC3_08500 PF00391 PEP-utilising enzyme, mobile domain XFC3_08500 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain XFC3_08500 PF02896 PEP-utilising enzyme, TIM barrel domain XFC3_08510 PF00929 Exonuclease XFC3_08525 PF12833 Helix-turn-helix domain XFC3_08525 PF12852 Cupin XFC3_08530 PF07859 alpha/beta hydrolase fold XFC3_08535 PF00207 Alpha-2-macroglobulin family XFC3_08535 PF01835 MG2 domain XFC3_08535 PF07703 Alpha-2-macroglobulin family N-terminal region XFC3_08535 PF11974 Alpha-2-macroglobulin MG1 domain XFC3_08540 PF00491 Arginase family XFC3_08560 PF04303 PrpF protein XFC3_08565 PF00330 Aconitase family (aconitate hydratase) XFC3_08565 PF00694 Aconitase C-terminal domain XFC3_08600 PF13714 Phosphoenolpyruvate phosphomutase XFC3_08605 PF04357 XFC3_08605 XFC3_08610 PF01103 Surface antigen XFC3_08610 PF07244 Surface antigen variable number repeat XFC3_08610 PF17243 XFC3_08610 XFC3_08615 PF13185 GAF domain XFC3_08620 PF00271 Helicase conserved C-terminal domain XFC3_08620 PF04408 Helicase associated domain (HA2) XFC3_08620 PF08482 XFC3_08620 XFC3_08635 PF05567 Neisseria PilC beta-propeller domain XFC3_08640 PF00005 ABC transporter XFC3_08645 PF01061 XFC3_08645 XFC3_08650 PF00005 ABC transporter XFC3_08650 PF00664 ABC transporter transmembrane region XFC3_08650 PF03412 Peptidase C39 family XFC3_08660 PF13437 HlyD family secretion protein XFC3_08665 PF09900 XFC3_08665 XFC3_08670 PF00009 Elongation factor Tu GTP binding domain XFC3_08670 PF00679 Elongation factor G C-terminus XFC3_08670 PF03144 Elongation factor Tu domain 2 XFC3_08675 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XFC3_08680 PF00056 lactate/malate dehydrogenase, NAD binding domain XFC3_08680 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XFC3_08685 PF00043 Glutathione S-transferase, C-terminal domain XFC3_08685 PF02798 Glutathione S-transferase, N-terminal domain XFC3_08690 PF13091 PLD-like domain XFC3_08695 PF00471 Ribosomal protein L33 XFC3_08700 PF00830 Ribosomal L28 family XFC3_08705 PF07209 XFC3_08705 XFC3_08720 PF13419 Haloacid dehalogenase-like hydrolase XFC3_08725 PF00849 RNA pseudouridylate synthase XFC3_08730 PF00085 Thioredoxin XFC3_08735 PF00258 Flavodoxin XFC3_08740 PF00268 Ribonucleotide reductase, small chain XFC3_08745 PF00317 Ribonucleotide reductase, all-alpha domain XFC3_08745 PF02867 Ribonucleotide reductase, barrel domain XFC3_08755 PF04332 XFC3_08755 XFC3_08760 PF13616 PPIC-type PPIASE domain XFC3_08760 PF13623 XFC3_08760 XFC3_08775 PF00216 Bacterial DNA-binding protein XFC3_08780 PF00004 ATPase family associated with various cellular activities (AAA) XFC3_08780 PF02190 ATP-dependent protease La (LON) domain XFC3_08780 PF05362 Lon protease (S16) C-terminal proteolytic domain XFC3_08785 PF06689 ClpX C4-type zinc finger XFC3_08785 PF07724 AAA domain (Cdc48 subfamily) XFC3_08785 PF10431 C-terminal, D2-small domain, of ClpB protein XFC3_08790 PF00574 Clp protease XFC3_08795 PF05697 Bacterial trigger factor protein (TF) XFC3_08795 PF05698 Bacterial trigger factor protein (TF) C-terminus XFC3_08810 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XFC3_08810 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XFC3_08810 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XFC3_08820 PF03280 Proteobacterial lipase chaperone protein XFC3_08825 PF00561 alpha/beta hydrolase fold XFC3_08830 PF01078 Magnesium chelatase, subunit ChlI XFC3_08830 PF13335 XFC3_08830 XFC3_08830 PF13541 Subunit ChlI of Mg-chelatase XFC3_08835 PF04380 XFC3_08835 XFC3_08840 PF01196 Ribosomal protein L17 XFC3_08845 PF01000 RNA polymerase Rpb3/RpoA insert domain XFC3_08845 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain XFC3_08845 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain XFC3_08850 PF00163 Ribosomal protein S4/S9 N-terminal domain XFC3_08850 PF01479 S4 domain XFC3_08855 PF00411 Ribosomal protein S11 XFC3_08860 PF00416 Ribosomal protein S13/S18 XFC3_08865 PF00344 SecY translocase XFC3_08870 PF00828 Ribosomal protein L18e/L15 XFC3_08875 PF00333 Ribosomal protein S5, N-terminal domain XFC3_08875 PF03719 Ribosomal protein S5, C-terminal domain XFC3_08880 PF00861 Ribosomal L18p/L5e family XFC3_08885 PF00347 Ribosomal protein L6 XFC3_08890 PF00410 Ribosomal protein S8 XFC3_08895 PF00281 Ribosomal protein L5 XFC3_08895 PF00673 ribosomal L5P family C-terminus XFC3_08900 PF00467 KOW motif XFC3_08900 PF17136 XFC3_08900 XFC3_08905 PF00238 Ribosomal protein L14p/L23e XFC3_08910 PF00366 Ribosomal protein S17 XFC3_08915 PF00831 Ribosomal L29 protein XFC3_08920 PF00252 Ribosomal protein L16p/L10e XFC3_08925 PF00189 Ribosomal protein S3, C-terminal domain XFC3_08925 PF07650 KH domain XFC3_08930 PF00237 Ribosomal protein L22p/L17e XFC3_08940 PF00181 Ribosomal Proteins L2, RNA binding domain XFC3_08940 PF03947 Ribosomal Proteins L2, C-terminal domain XFC3_08945 PF00276 Ribosomal protein L23 XFC3_08950 PF00573 Ribosomal protein L4/L1 family XFC3_08955 PF00297 Ribosomal protein L3 XFC3_08960 PF00338 Ribosomal protein S10p/S20e XFC3_08965 PF00119 ATP synthase A chain XFC3_08970 PF00137 ATP synthase subunit C XFC3_08975 PF00430 ATP synthase B/B' CF(0) XFC3_08980 PF00213 ATP synthase delta (OSCP) subunit XFC3_08985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XFC3_08985 PF00306 ATP synthase alpha/beta chain, C terminal domain XFC3_08985 PF02874 ATP synthase alpha/beta family, beta-barrel domain XFC3_08990 PF00231 ATP synthase XFC3_08995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XFC3_08995 PF02874 ATP synthase alpha/beta family, beta-barrel domain XFC3_09000 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain XFC3_09000 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain XFC3_09005 PF01817 Chorismate mutase type II XFC3_09010 PF00132 Bacterial transferase hexapeptide (six repeats) XFC3_09010 PF12804 MobA-like NTP transferase domain XFC3_09020 PF01965 DJ-1/PfpI family XFC3_09025 PF00107 Zinc-binding dehydrogenase XFC3_09025 PF08240 Alcohol dehydrogenase GroES-like domain XFC3_09035 PF03358 NADPH-dependent FMN reductase XFC3_09040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XFC3_09040 PF03466 LysR substrate binding domain XFC3_09045 PF01523 Putative modulator of DNA gyrase XFC3_09050 PF04751 Protein of unknown function (DUF615) XFC3_09055 PF01523 Putative modulator of DNA gyrase XFC3_09060 PF13116 XFC3_09060 XFC3_09060 PF13502 XFC3_09060 XFC3_09065 PF00575 S1 RNA binding domain XFC3_09065 PF10150 Ribonuclease E/G family XFC3_09070 PF02545 Maf-like protein XFC3_09075 PF04402 Protein of unknown function (DUF541) XFC3_09080 PF02219 Methylenetetrahydrofolate reductase XFC3_09085 PF00293 NUDIX domain XFC3_09085 PF02581 Thiamine monophosphate synthase/TENI XFC3_09095 PF08245 Mur ligase middle domain XFC3_09105 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain XFC3_09105 PF00696 Amino acid kinase family XFC3_09105 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XFC3_09110 PF00378 Enoyl-CoA hydratase/isomerase family XFC3_09115 PF00072 Response regulator receiver domain XFC3_09115 PF00512 His Kinase A (phospho-acceptor) domain XFC3_09115 PF01627 Hpt domain XFC3_09115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFC3_09120 PF00072 Response regulator receiver domain XFC3_09120 PF13487 HD domain XFC3_09125 PF00152 tRNA synthetases class II (D, K and N) XFC3_09125 PF01336 OB-fold nucleic acid binding domain XFC3_09130 PF00472 RF-1 domain XFC3_09130 PF03462 PCRF domain XFC3_09135 PF01368 DHH family XFC3_09135 PF02272 DHHA1 domain XFC3_09145 PF01272 Transcription elongation factor, GreA/GreB, C-term XFC3_09145 PF03449 Transcription elongation factor, N-terminal XFC3_09150 PF02142 MGS-like domain XFC3_09150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XFC3_09150 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XFC3_09155 PF00117 Glutamine amidotransferase class-I XFC3_09155 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain XFC3_09160 PF01113 Dihydrodipicolinate reductase, N-terminus XFC3_09160 PF05173 Dihydrodipicolinate reductase, C-terminus XFC3_09170 PF00476 DNA polymerase family A XFC3_09170 PF01367 5'-3' exonuclease, C-terminal SAM fold XFC3_09170 PF01612 3'-5' exonuclease XFC3_09170 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XFC3_09175 PF11191 Protein of unknown function (DUF2782) XFC3_09185 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family XFC3_09190 PF03358 NADPH-dependent FMN reductase XFC3_09195 PF00710 Asparaginase XFC3_09200 PF13091 PLD-like domain XFC3_09205 PF04264 YceI-like domain XFC3_09210 PF00300 Histidine phosphatase superfamily (branch 1) XFC3_09215 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XFC3_09220 PF02606 Tetraacyldisaccharide-1-P 4'-kinase XFC3_09225 PF00005 ABC transporter XFC3_09225 PF00664 ABC transporter transmembrane region XFC3_09230 PF02472 Biopolymer transport protein ExbD/TolR XFC3_09235 PF01618 XFC3_09235 XFC3_09240 PF00753 Metallo-beta-lactamase superfamily XFC3_09240 PF03772 XFC3_09240 XFC3_09240 PF13567 XFC3_09240 XFC3_09245 PF00005 ABC transporter XFC3_09250 PF02687 XFC3_09250 XFC3_09250 PF12704 MacB-like periplasmic core domain XFC3_09260 PF03937 Flavinator of succinate dehydrogenase XFC3_09265 PF13085 2Fe-2S iron-sulfur cluster binding domain XFC3_09265 PF13534 4Fe-4S dicluster domain XFC3_09270 PF00890 FAD binding domain XFC3_09270 PF02910 Fumarate reductase flavoprotein C-term XFC3_09275 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XFC3_09280 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XFC3_09285 PF07896 Protein of unknown function (DUF1674) XFC3_09290 PF08669 Glycine cleavage T-protein C-terminal barrel domain XFC3_09295 PF00005 ABC transporter XFC3_09295 PF08402 TOBE domain XFC3_09300 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XFC3_09300 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XFC3_09305 PF02685 Glucokinase XFC3_09310 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase XFC3_09315 PF00920 Dehydratase family XFC3_09320 PF01081 KDPG and KHG aldolase XFC3_09345 PF00696 Amino acid kinase family XFC3_09350 PF08850 XFC3_09350 XFC3_09355 PF01694 Rhomboid family XFC3_09360 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) XFC3_09365 PF01765 Ribosome recycling factor XFC3_09370 PF01255 Putative undecaprenyl diphosphate synthase XFC3_09375 PF01148 Cytidylyltransferase family XFC3_09380 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase XFC3_09380 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal XFC3_09380 PF13288 DXP reductoisomerase C-terminal domain XFC3_09385 PF02163 Peptidase family M50 XFC3_09395 PF00132 Bacterial transferase hexapeptide (six repeats) XFC3_09395 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD XFC3_09395 PF14602 Hexapeptide repeat of succinyl-transferase XFC3_09400 PF07977 FabA-like domain XFC3_09405 PF00132 Bacterial transferase hexapeptide (six repeats) XFC3_09405 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 XFC3_09410 PF02684 XFC3_09410 XFC3_09415 PF01351 Ribonuclease HII XFC3_09420 PF00501 AMP-binding enzyme XFC3_09425 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XFC3_09425 PF05221 S-adenosyl-L-homocysteine hydrolase XFC3_09430 PF00593 TonB dependent receptor XFC3_09440 PF01553 Acyltransferase XFC3_09445 PF02129 X-Pro dipeptidyl-peptidase (S15 family) XFC3_09445 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XFC3_09450 PF00082 Subtilase family XFC3_09450 PF03797 Autotransporter beta-domain XFC3_09450 PF12951 XFC3_09450 XFC3_09460 PF13622 Thioesterase-like superfamily XFC3_09470 PF04376 XFC3_09470 XFC3_09470 PF04377 XFC3_09470 XFC3_09475 PF01566 XFC3_09475 XFC3_09480 PF01325 Iron dependent repressor, N-terminal DNA binding domain XFC3_09480 PF02742 Iron dependent repressor, metal binding and dimerisation domain XFC3_09485 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XFC3_09490 PF00353 Hemolysin-type calcium-binding repeat (2 copies) XFC3_09490 PF06594 XFC3_09490 XFC3_09520 PF00171 Aldehyde dehydrogenase family XFC3_09525 PF00696 Amino acid kinase family XFC3_09525 PF01472 PUA domain XFC3_09530 PF00206 Lyase XFC3_09535 PF01118 Semialdehyde dehydrogenase, NAD binding domain XFC3_09540 PF00696 Amino acid kinase family XFC3_09540 PF04768 Protein of unknown function (DUF619) XFC3_09545 PF01546 Peptidase family M20/M25/M40 XFC3_09545 PF07687 Peptidase dimerisation domain XFC3_09550 PF00764 Arginosuccinate synthase XFC3_09555 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XFC3_09555 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XFC3_09565 PF01406 tRNA synthetases class I (C) catalytic domain XFC3_09565 PF09190 DALR domain XFC3_09570 PF02657 Fe-S metabolism associated domain XFC3_09575 PF05977 Transmembrane secretion effector XFC3_09580 PF12146 Putative lysophospholipase XFC3_09585 PF01258 Prokaryotic dksA/traR C4-type zinc finger XFC3_09590 PF01809 XFC3_09590 XFC3_09595 PF01979 Amidohydrolase family XFC3_09600 PF01551 Peptidase family M23 XFC3_09605 PF00990 GGDEF domain XFC3_09605 PF07695 XFC3_09605 XFC3_09605 PF07696 7TMR-DISM extracellular 2 XFC3_09610 PF01019 Gamma-glutamyltranspeptidase XFC3_09615 PF00037 4Fe-4S binding domain XFC3_09625 PF01467 Cytidylyltransferase XFC3_09630 PF03602 Conserved hypothetical protein 95 XFC3_09635 PF00183 Hsp90 protein XFC3_09635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFC3_09640 PF00390 Malic enzyme, N-terminal domain XFC3_09640 PF01515 Phosphate acetyl/butaryl transferase XFC3_09640 PF03949 Malic enzyme, NAD binding domain XFC3_09645 PF00375 Sodium:dicarboxylate symporter family XFC3_09650 PF07396 Phosphate-selective porin O and P XFC3_09665 PF00072 Response regulator receiver domain XFC3_09665 PF00196 Bacterial regulatory proteins, luxR family XFC3_09690 PF13385 Concanavalin A-like lectin/glucanases superfamily XFC3_09730 PF11134 XFC3_09730 XFC3_09735 PF11650 P22 tail accessory factor XFC3_09740 PF11651 P22 coat protein - gene protein 5 XFC3_09750 PF16510 XFC3_09750 XFC3_09755 PF03237 Terminase-like family XFC3_09755 PF17289 XFC3_09755 XFC3_09775 PF16083 XFC3_09775 XFC3_09780 PF00959 Phage lysozyme XFC3_09790 PF03288 Poxvirus D5 protein-like XFC3_09790 PF08706 XFC3_09790 XFC3_09795 PF02498 XFC3_09795 XFC3_09860 PF10991 Protein of unknown function (DUF2815) XFC3_09865 PF02498 XFC3_09865 XFC3_09870 PF00476 DNA polymerase family A XFC3_09875 PF08774 VRR-NUC domain XFC3_09885 PF00176 SNF2 family N-terminal domain XFC3_09905 PF05954 Phage late control gene D protein (GPD) XFC3_09910 PF05489 Phage Tail Protein X XFC3_09915 PF06995 XFC3_09915 XFC3_09920 PF10145 XFC3_09920 XFC3_09925 PF10109 XFC3_09925 XFC3_09930 PF04985 XFC3_09930 XFC3_09935 PF04984 Phage tail sheath protein XFC3_09935 PF17482 XFC3_09935 XFC3_09945 PF09684 XFC3_09945 XFC3_09950 PF04865 XFC3_09950 XFC3_09960 PF05973 XFC3_09960 XFC3_09965 PF13744 Helix-turn-helix domain XFC3_09970 PF01381 Helix-turn-helix XFC3_09975 PF04717 Phage-related baseplate assembly protein XFC3_10000 PF04586 XFC3_10000 XFC3_10000 PF05065 Phage capsid family XFC3_10005 PF05136 XFC3_10005 XFC3_10015 PF05876 XFC3_10015 XFC3_10020 PF07471 Phage DNA packaging protein Nu1 XFC3_10035 PF16083 XFC3_10035 XFC3_10040 PF00959 Phage lysozyme XFC3_10050 PF03288 Poxvirus D5 protein-like XFC3_10050 PF08706 XFC3_10050 XFC3_10085 PF01381 Helix-turn-helix XFC3_10145 PF10991 Protein of unknown function (DUF2815) XFC3_10150 PF02498 XFC3_10150 XFC3_10160 PF08774 VRR-NUC domain XFC3_10170 PF00176 SNF2 family N-terminal domain XFC3_10190 PF00271 Helicase conserved C-terminal domain XFC3_10190 PF02151 UvrB/uvrC motif XFC3_10190 PF04851 Type III restriction enzyme, res subunit XFC3_10190 PF12344 Ultra-violet resistance protein B XFC3_10205 PF00701 Dihydrodipicolinate synthetase family XFC3_10210 PF13740 ACT domain XFC3_10215 PF00578 AhpC/TSA family XFC3_10235 PF00586 AIR synthase related protein, N-terminal domain XFC3_10235 PF02769 AIR synthase related protein, C-terminal domain XFC3_10240 PF01029 NusB family XFC3_10245 PF00885 6,7-dimethyl-8-ribityllumazine synthase XFC3_10250 PF00925 GTP cyclohydrolase II XFC3_10250 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase XFC3_10255 PF00677 Lumazine binding domain XFC3_10260 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XFC3_10260 PF01872 RibD C-terminal domain XFC3_10265 PF03477 ATP cone domain XFC3_10275 PF00464 Serine hydroxymethyltransferase XFC3_10280 PF00005 ABC transporter XFC3_10280 PF12848 ABC transporter XFC3_10285 PF06039 XFC3_10285 XFC3_10290 PF04134 XFC3_10290 XFC3_10300 PF02578 Multi-copper polyphenol oxidoreductase laccase XFC3_10305 PF00849 RNA pseudouridylate synthase XFC3_10305 PF01479 S4 domain XFC3_10310 PF13525 Outer membrane lipoprotein XFC3_10315 PF09566 XFC3_10315 XFC3_10320 PF02086 D12 class N6 adenine-specific DNA methyltransferase XFC3_10330 PF02421 Ferrous iron transport protein B XFC3_10330 PF07664 XFC3_10330 XFC3_10330 PF07670 Nucleoside recognition XFC3_10335 PF04023 FeoA domain XFC3_10345 PF13231 XFC3_10345 XFC3_10350 PF01029 NusB family XFC3_10350 PF01189 NOL1/NOP2/sun family XFC3_10355 PF00551 Formyl transferase XFC3_10355 PF02911 Formyl transferase, C-terminal domain XFC3_10360 PF01327 Polypeptide deformylase XFC3_10365 PF01476 LysM domain XFC3_10370 PF02481 DNA recombination-mediator protein A XFC3_10375 PF04361 XFC3_10375 XFC3_10380 PF01131 DNA topoisomerase XFC3_10380 PF01751 Toprim domain XFC3_10380 PF13368 XFC3_10380 XFC3_10385 PF01300 Telomere recombination XFC3_10390 PF00132 Bacterial transferase hexapeptide (six repeats) XFC3_10410 PF01381 Helix-turn-helix XFC3_10415 PF13561 Enoyl-(Acyl carrier protein) reductase XFC3_10420 PF04386 Stringent starvation protein B XFC3_10425 PF00043 Glutathione S-transferase, C-terminal domain XFC3_10425 PF02798 Glutathione S-transferase, N-terminal domain XFC3_10430 PF02167 Cytochrome C1 family XFC3_10435 PF00032 Cytochrome b(C-terminal)/b6/petD XFC3_10435 PF00033 Cytochrome b(N-terminal)/b6/petB XFC3_10440 PF00355 Rieske [2Fe-2S] domain XFC3_10440 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal XFC3_10445 PF01464 Transglycosylase SLT domain XFC3_10450 PF00919 Uncharacterized protein family UPF0004 XFC3_10450 PF01938 TRAM domain XFC3_10450 PF04055 Radical SAM superfamily XFC3_10455 PF02562 PhoH-like protein XFC3_10460 PF02130 Uncharacterized protein family UPF0054 XFC3_10470 PF00571 CBS domain XFC3_10470 PF03471 Transporter associated domain XFC3_10475 PF13387 XFC3_10475 XFC3_10480 PF01544 CorA-like Mg2+ transporter protein XFC3_10505 PF05590 XFC3_10505 XFC3_10510 PF05590 XFC3_10510 XFC3_10515 PF05590 XFC3_10515 XFC3_10520 PF05590 XFC3_10520 XFC3_10580 PF00534 Glycosyl transferases group 1 XFC3_10580 PF13439 Glycosyltransferase Family 4 XFC3_10590 PF13692 Glycosyl transferases group 1 XFC3_10595 PF00905 Penicillin binding protein transpeptidase domain XFC3_10595 PF00912 Transglycosylase XFC3_10595 PF14814 Bifunctional transglycosylase second domain XFC3_10605 PF13307 Helicase C-terminal domain XFC3_10615 PF00484 Carbonic anhydrase XFC3_10620 PF13439 Glycosyltransferase Family 4 XFC3_10620 PF13692 Glycosyl transferases group 1 XFC3_10625 PF01522 Polysaccharide deacetylase XFC3_10630 PF00005 ABC transporter XFC3_10630 PF09383 NIL domain XFC3_10635 PF00528 Binding-protein-dependent transport system inner membrane component XFC3_10640 PF03180 NLPA lipoprotein XFC3_10645 PF03922 OmpW family XFC3_10650 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XFC3_10650 PF00364 Biotin-requiring enzyme XFC3_10650 PF02817 e3 binding domain XFC3_10655 PF00364 Biotin-requiring enzyme XFC3_10655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XFC3_10655 PF07992 Pyridine nucleotide-disulphide oxidoreductase XFC3_10665 PF01545 Cation efflux family XFC3_10670 PF01053 Cys/Met metabolism PLP-dependent enzyme XFC3_10675 PF00561 alpha/beta hydrolase fold XFC3_10680 PF01551 Peptidase family M23 XFC3_10685 PF01975 Survival protein SurE XFC3_10690 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) XFC3_10695 PF09335 XFC3_10695 XFC3_10700 PF01476 LysM domain XFC3_10700 PF01551 Peptidase family M23 XFC3_10715 PF00842 Alanine racemase, C-terminal domain XFC3_10715 PF01168 Alanine racemase, N-terminal domain XFC3_10720 PF01266 FAD dependent oxidoreductase XFC3_10725 PF01641 SelR domain XFC3_10730 PF00704 Glycosyl hydrolases family 18 XFC3_10735 PF00728 Glycosyl hydrolase family 20, catalytic domain XFC3_10735 PF02838 Glycosyl hydrolase family 20, domain 2 XFC3_10735 PF13290 XFC3_10735 XFC3_10740 PF00703 Glycosyl hydrolases family 2 XFC3_10745 PF00933 Glycosyl hydrolase family 3 N terminal domain XFC3_10745 PF01915 Glycosyl hydrolase family 3 C-terminal domain XFC3_10745 PF07691 PA14 domain XFC3_10745 PF14310 Fibronectin type III-like domain XFC3_10755 PF06824 Protein of unknown function (DUF1237) XFC3_10760 PF07971 Glycosyl hydrolase family 92 XFC3_10765 PF01301 Glycosyl hydrolases family 35 XFC3_10770 PF04166 Pyridoxal phosphate biosynthetic protein PdxA XFC3_10775 PF00639 PPIC-type PPIASE domain XFC3_10775 PF09312 SurA N-terminal domain XFC3_10780 PF04453 Organic solvent tolerance protein XFC3_10785 PF01494 FAD binding domain XFC3_10790 PF01494 FAD binding domain XFC3_10795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XFC3_10795 PF03466 LysR substrate binding domain XFC3_10805 PF00291 Pyridoxal-phosphate dependent enzyme XFC3_10825 PF00274 Fructose-bisphosphate aldolase class-I XFC3_10830 PF00224 Pyruvate kinase, barrel domain XFC3_10830 PF02887 Pyruvate kinase, alpha/beta domain XFC3_10835 PF00162 Phosphoglycerate kinase XFC3_10840 PF00749 tRNA synthetases class I (E and Q), catalytic domain XFC3_10845 PF01475 Ferric uptake regulator family XFC3_10850 PF02225 PA domain XFC3_10850 PF04389 Peptidase family M28 XFC3_10855 PF00150 Cellulase (glycosyl hydrolase family 5) XFC3_10855 PF00553 Cellulose binding domain XFC3_10860 PF00675 Insulinase (Peptidase family M16) XFC3_10860 PF05193 Peptidase M16 inactive domain XFC3_10865 PF09849 XFC3_10865 XFC3_10875 PF00150 Cellulase (glycosyl hydrolase family 5) XFC3_10875 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel XFC3_10880 PF01043 SecA preprotein cross-linking domain XFC3_10880 PF02810 SEC-C motif XFC3_10880 PF07516 SecA Wing and Scaffold domain XFC3_10880 PF07517 SecA DEAD-like domain XFC3_10885 PF01551 Peptidase family M23 XFC3_10890 PF05258 XFC3_10890 XFC3_10895 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase XFC3_10900 PF00091 Tubulin/FtsZ family, GTPase domain XFC3_10900 PF12327 FtsZ family, C-terminal domain XFC3_10905 PF02491 SHS2 domain inserted in FTSA XFC3_10905 PF14450 Cell division protein FtsA XFC3_10910 PF03799 Cell division protein FtsQ XFC3_10910 PF08478 POTRA domain, FtsQ-type XFC3_10915 PF01820 D-ala D-ala ligase N-terminus XFC3_10915 PF07478 D-ala D-ala ligase C-terminus XFC3_10920 PF01225 Mur ligase family, catalytic domain XFC3_10920 PF02875 Mur ligase family, glutamate ligase domain XFC3_10920 PF08245 Mur ligase middle domain XFC3_10925 PF03033 Glycosyltransferase family 28 N-terminal domain XFC3_10925 PF04101 Glycosyltransferase family 28 C-terminal domain XFC3_10930 PF01098 XFC3_10930 XFC3_10935 PF00953 Glycosyl transferase family 4 XFC3_10940 PF01225 Mur ligase family, catalytic domain XFC3_10940 PF02875 Mur ligase family, glutamate ligase domain XFC3_10940 PF08245 Mur ligase middle domain XFC3_10945 PF01225 Mur ligase family, catalytic domain XFC3_10945 PF02875 Mur ligase family, glutamate ligase domain XFC3_10945 PF08245 Mur ligase middle domain XFC3_10950 PF00905 Penicillin binding protein transpeptidase domain XFC3_10950 PF03717 Penicillin-binding Protein dimerisation domain XFC3_10955 PF04999 XFC3_10955 XFC3_10960 PF01795 MraW methylase family XFC3_10965 PF02381 MraZ protein XFC3_10975 PF02080 TrkA-C domain XFC3_10975 PF03600 Citrate transporter XFC3_10980 PF02390 Putative methyltransferase XFC3_10985 PF05690 Thiazole biosynthesis protein ThiG XFC3_10990 PF02597 ThiS family XFC3_10995 PF00657 GDSL-like Lipase/Acylhydrolase XFC3_10995 PF03797 Autotransporter beta-domain XFC3_11025 PF03176 MMPL family XFC3_11040 PF03279 XFC3_11040 XFC3_11060 PF00550 Phosphopantetheine attachment site XFC3_11070 PF00753 Metallo-beta-lactamase superfamily XFC3_11070 PF04273 Putative phosphatase (DUF442) XFC3_11075 PF12840 Helix-turn-helix domain XFC3_11080 PF04143 XFC3_11080 XFC3_11090 PF01925 XFC3_11090 XFC3_11095 PF00692 dUTPase XFC3_11100 PF07920 Protein of unknown function (DUF1684) XFC3_11105 PF01119 DNA mismatch repair protein, C-terminal domain XFC3_11105 PF08676 MutL C terminal dimerisation domain XFC3_11105 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFC3_11110 PF01520 N-acetylmuramoyl-L-alanine amidase XFC3_11110 PF11741 AMIN domain XFC3_11115 PF02367 Uncharacterised P-loop hydrolase UPF0079 XFC3_11120 PF01256 Carbohydrate kinase XFC3_11120 PF03853 YjeF-related protein N-terminus XFC3_11130 PF02601 XFC3_11130 XFC3_11130 PF13742 XFC3_11130 XFC3_11140 PF03781 Sulfatase-modifying factor enzyme 1 XFC3_11145 PF00570 HRDC domain XFC3_11145 PF01612 3'-5' exonuclease XFC3_11150 PF00816 H-NS histone family XFC3_11155 PF01728 FtsJ-like methyltransferase XFC3_11165 PF13411 MerR HTH family regulatory protein XFC3_11170 PF00216 Bacterial DNA-binding protein XFC3_11175 PF01588 Putative tRNA binding domain XFC3_11175 PF03147 Ferredoxin-fold anticodon binding domain XFC3_11175 PF03483 B3/4 domain XFC3_11175 PF03484 tRNA synthetase B5 domain XFC3_11180 PF01409 tRNA synthetases class II core domain (F) XFC3_11180 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain XFC3_11185 PF00453 Ribosomal protein L20 XFC3_11190 PF01632 Ribosomal protein L35 XFC3_11195 PF00707 Translation initiation factor IF-3, C-terminal domain XFC3_11195 PF05198 Translation initiation factor IF-3, N-terminal domain XFC3_11200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XFC3_11200 PF02824 TGS domain XFC3_11200 PF03129 Anticodon binding domain XFC3_11200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XFC3_11215 PF05954 Phage late control gene D protein (GPD) XFC3_11220 PF05489 Phage Tail Protein X XFC3_11225 PF06995 XFC3_11225 XFC3_11230 PF10145 XFC3_11230 XFC3_11235 PF10109 XFC3_11235 XFC3_11240 PF04985 XFC3_11240 XFC3_11245 PF04984 Phage tail sheath protein XFC3_11245 PF17482 XFC3_11245 XFC3_11255 PF09684 XFC3_11255 XFC3_11260 PF04865 XFC3_11260 XFC3_11265 PF04965 Gene 25-like lysozyme XFC3_11270 PF15723 XFC3_11270 XFC3_11275 PF15731 XFC3_11275 XFC3_11280 PF04717 Phage-related baseplate assembly protein XFC3_11305 PF04586 XFC3_11305 XFC3_11305 PF05065 Phage capsid family XFC3_11310 PF05136 XFC3_11310 XFC3_11320 PF05876 XFC3_11320 XFC3_11325 PF07471 Phage DNA packaging protein Nu1 XFC3_11340 PF16083 XFC3_11340 XFC3_11345 PF00959 Phage lysozyme XFC3_11355 PF03288 Poxvirus D5 protein-like XFC3_11355 PF08706 XFC3_11355 XFC3_11360 PF02498 XFC3_11360 XFC3_11395 PF00717 Peptidase S24-like XFC3_11395 PF01381 Helix-turn-helix XFC3_11440 PF10926 XFC3_11440 XFC3_11445 PF10991 Protein of unknown function (DUF2815) XFC3_11450 PF02498 XFC3_11450 XFC3_11460 PF08774 VRR-NUC domain XFC3_11470 PF00176 SNF2 family N-terminal domain XFC3_11475 PF13986 XFC3_11475 XFC3_11480 PF00589 Phage integrase family XFC3_11495 PF00072 Response regulator receiver domain XFC3_11495 PF00486 Transcriptional regulatory protein, C terminal XFC3_11500 PF00512 His Kinase A (phospho-acceptor) domain XFC3_11500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFC3_11505 PF01121 Dephospho-CoA kinase XFC3_11510 PF01478 Type IV leader peptidase family XFC3_11510 PF06750 XFC3_11510 XFC3_11515 PF00482 Type II secretion system (T2SS), protein F XFC3_11520 PF00114 Pilin (bacterial filament) XFC3_11520 PF07963 Prokaryotic N-terminal methylation motif XFC3_11530 PF00114 Pilin (bacterial filament) XFC3_11530 PF07963 Prokaryotic N-terminal methylation motif XFC3_11540 PF00437 Type II/IV secretion system protein XFC3_11540 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XFC3_11545 PF00072 Response regulator receiver domain XFC3_11545 PF00158 Sigma-54 interaction domain XFC3_11545 PF02954 Bacterial regulatory protein, Fis family XFC3_11560 PF00549 CoA-ligase XFC3_11560 PF08442 ATP-grasp domain XFC3_11565 PF00549 CoA-ligase XFC3_11565 PF02629 CoA binding domain XFC3_11575 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB XFC3_11575 PF08479 POTRA domain, ShlB-type XFC3_11575 PF17287 XFC3_11575 XFC3_11580 PF00326 Prolyl oligopeptidase family XFC3_11585 PF00521 DNA gyrase/topoisomerase IV, subunit A XFC3_11585 PF03989 DNA gyrase C-terminal domain, beta-propeller XFC3_11590 PF01008 Initiation factor 2 subunit family XFC3_11595 PF11218 XFC3_11595 XFC3_11600 PF00152 tRNA synthetases class II (D, K and N) XFC3_11605 PF00583 Acetyltransferase (GNAT) family XFC3_11610 PF00533 BRCA1 C Terminus (BRCT) domain XFC3_11610 PF01653 NAD-dependent DNA ligase adenylation domain XFC3_11610 PF03119 NAD-dependent DNA ligase C4 zinc finger domain XFC3_11610 PF03120 NAD-dependent DNA ligase OB-fold domain XFC3_11610 PF12826 Helix-hairpin-helix motif XFC3_11615 PF04354 ZipA, C-terminal FtsZ-binding domain XFC3_11620 PF02463 RecF/RecN/SMC N terminal domain XFC3_11620 PF06470 SMC proteins Flexible Hinge Domain XFC3_11625 PF01281 Ribosomal protein L9, N-terminal domain XFC3_11625 PF03948 Ribosomal protein L9, C-terminal domain XFC3_11630 PF01084 Ribosomal protein S18 XFC3_11635 PF01250 Ribosomal protein S6 XFC3_11640 PF01521 Iron-sulphur cluster biosynthesis XFC3_11645 PF00152 tRNA synthetases class II (D, K and N) XFC3_11645 PF01336 OB-fold nucleic acid binding domain XFC3_11650 PF01061 XFC3_11650 XFC3_11655 PF00005 ABC transporter XFC3_11660 PF13828 XFC3_11660 XFC3_11665 PF01180 Dihydroorotate dehydrogenase XFC3_11670 PF01565 FAD binding domain XFC3_11670 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain XFC3_11675 PF00892 EamA-like transporter family XFC3_11680 PF01569 PAP2 superfamily XFC3_11685 PF04551 GcpE protein XFC3_11695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFC3_11700 PF00072 Response regulator receiver domain XFC3_11700 PF02954 Bacterial regulatory protein, Fis family XFC3_11705 PF00889 Elongation factor TS XFC3_11710 PF00318 Ribosomal protein S2 XFC3_11720 PF00005 ABC transporter XFC3_11720 PF00664 ABC transporter transmembrane region XFC3_11725 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) XFC3_11730 PF02321 Outer membrane efflux protein XFC3_11735 PF12850 Calcineurin-like phosphoesterase superfamily domain XFC3_11740 PF02541 Ppx/GppA phosphatase family XFC3_11745 PF02503 Polyphosphate kinase middle domain XFC3_11745 PF13089 Polyphosphate kinase N-terminal domain XFC3_11745 PF13090 Polyphosphate kinase C-terminal domain XFC3_11750 PF00512 His Kinase A (phospho-acceptor) domain XFC3_11750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFC3_11750 PF11808 XFC3_11750 XFC3_11750 PF13188 PAS domain XFC3_11755 PF00072 Response regulator receiver domain XFC3_11755 PF00486 Transcriptional regulatory protein, C terminal XFC3_11760 PF01435 Peptidase family M48 XFC3_11765 PF00462 Glutaredoxin XFC3_11770 PF00180 Isocitrate/isopropylmalate dehydrogenase XFC3_11775 PF13211 XFC3_11775 XFC3_11780 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XFC3_11780 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XFC3_11785 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase XFC3_11790 PF00037 4Fe-4S binding domain XFC3_11790 PF11953 Domain of unknown function (DUF3470) XFC3_11800 PF01106 NifU-like domain XFC3_11805 PF01329 Pterin 4 alpha carbinolamine dehydratase XFC3_11810 PF03544 Gram-negative bacterial TonB protein C-terminal XFC3_11815 PF00849 RNA pseudouridylate synthase XFC3_11815 PF01479 S4 domain XFC3_11820 PF00575 S1 RNA binding domain XFC3_11820 PF10150 Ribonuclease E/G family XFC3_11825 PF00072 Response regulator receiver domain XFC3_11825 PF00196 Bacterial regulatory proteins, luxR family XFC3_11835 PF00072 Response regulator receiver domain XFC3_11840 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XFC3_11840 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XFC3_11845 PF00545 ribonuclease XFC3_11850 PF01337 Barstar (barnase inhibitor) XFC3_11855 PF00005 ABC transporter XFC3_11855 PF12848 ABC transporter XFC3_11855 PF16326 XFC3_11855 XFC3_11860 PF02696 XFC3_11860 XFC3_11865 PF00313 'Cold-shock' DNA-binding domain XFC3_11870 PF00563 EAL domain XFC3_11870 PF00989 PAS fold XFC3_11870 PF00990 GGDEF domain XFC3_11875 PF01435 Peptidase family M48 XFC3_11880 PF00009 Elongation factor Tu GTP binding domain XFC3_11880 PF03143 Elongation factor Tu C-terminal domain XFC3_11880 PF03144 Elongation factor Tu domain 2 XFC3_11885 PF00009 Elongation factor Tu GTP binding domain XFC3_11885 PF00679 Elongation factor G C-terminus XFC3_11885 PF03144 Elongation factor Tu domain 2 XFC3_11885 PF03764 Elongation factor G, domain IV XFC3_11885 PF14492 Elongation Factor G, domain II XFC3_11890 PF00177 Ribosomal protein S7p/S5e XFC3_11895 PF00164 Ribosomal protein S12/S23 XFC3_11900 PF00623 RNA polymerase Rpb1, domain 2 XFC3_11900 PF04983 RNA polymerase Rpb1, domain 3 XFC3_11900 PF04997 RNA polymerase Rpb1, domain 1 XFC3_11900 PF04998 RNA polymerase Rpb1, domain 5 XFC3_11900 PF05000 RNA polymerase Rpb1, domain 4 XFC3_11905 PF00562 RNA polymerase Rpb2, domain 6 XFC3_11905 PF04560 RNA polymerase Rpb2, domain 7 XFC3_11905 PF04561 RNA polymerase Rpb2, domain 2 XFC3_11905 PF04563 RNA polymerase beta subunit XFC3_11905 PF04565 RNA polymerase Rpb2, domain 3 XFC3_11905 PF10385 RNA polymerase beta subunit external 1 domain XFC3_11910 PF00542 Ribosomal protein L7/L12 C-terminal domain XFC3_11910 PF16320 XFC3_11910 XFC3_11915 PF00466 Ribosomal protein L10 XFC3_11920 PF00687 Ribosomal protein L1p/L10e family XFC3_11925 PF00298 Ribosomal protein L11, RNA binding domain XFC3_11925 PF03946 Ribosomal protein L11, N-terminal domain XFC3_11930 PF00467 KOW motif XFC3_11930 PF02357 Transcription termination factor nusG XFC3_11935 PF00584 SecE/Sec61-gamma subunits of protein translocation complex XFC3_11945 PF00009 Elongation factor Tu GTP binding domain XFC3_11945 PF03143 Elongation factor Tu C-terminal domain XFC3_11945 PF03144 Elongation factor Tu domain 2 XFC3_11965 PF01926 50S ribosome-binding GTPase XFC3_11965 PF06071 Protein of unknown function (DUF933) XFC3_11970 PF01195 Peptidyl-tRNA hydrolase XFC3_11975 PF01386 Ribosomal L25p family XFC3_11975 PF14693 Ribosomal protein TL5, C-terminal domain XFC3_11980 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase XFC3_11980 PF14572 Phosphoribosyl synthetase-associated domain XFC3_11990 PF00288 GHMP kinases N terminal domain XFC3_11990 PF08544 GHMP kinases C terminal XFC3_11995 PF03550 Outer membrane lipoprotein LolB XFC3_12000 PF13432 Tetratricopeptide repeat XFC3_12005 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain XFC3_12005 PF01488 Shikimate / quinate 5-dehydrogenase XFC3_12005 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain XFC3_12010 PF00472 RF-1 domain XFC3_12010 PF03462 PCRF domain XFC3_12015 PF01170 Putative RNA methylase family UPF0020 XFC3_12015 PF02926 THUMP domain XFC3_12015 PF10672 S-adenosylmethionine-dependent methyltransferase XFC3_12025 PF01510 N-acetylmuramoyl-L-alanine amidase XFC3_12045 PF13538 UvrD-like helicase C-terminal domain XFC3_12050 PF10053 XFC3_12050 XFC3_12055 PF01914 XFC3_12055 XFC3_12060 PF00462 Glutaredoxin XFC3_12065 PF02222 ATP-grasp domain XFC3_12070 PF00731 AIR carboxylase XFC3_12075 PF03966 Trm112p-like protein XFC3_12080 PF10030 XFC3_12080 XFC3_12085 PF07731 Multicopper oxidase XFC3_12085 PF07732 Multicopper oxidase XFC3_12090 PF06057 Bacterial virulence protein (VirJ) XFC3_12095 PF00580 UvrD/REP helicase N-terminal domain XFC3_12095 PF13361 UvrD-like helicase C-terminal domain XFC3_12100 PF04349 Periplasmic glucan biosynthesis protein, MdoG XFC3_12105 PF01343 Peptidase family S49 XFC3_12110 PF01554 MatE XFC3_12115 PF11304 XFC3_12115 XFC3_12125 PF00270 DEAD/DEAH box helicase XFC3_12125 PF00271 Helicase conserved C-terminal domain XFC3_12130 PF04542 Sigma-70 region 2 XFC3_12130 PF04545 Sigma-70, region 4 XFC3_12135 PF03167 Uracil DNA glycosylase superfamily XFC3_12140 PF00072 Response regulator receiver domain XFC3_12150 PF00005 ABC transporter XFC3_12155 PF00270 DEAD/DEAH box helicase XFC3_12155 PF00271 Helicase conserved C-terminal domain XFC3_12155 PF12300 XFC3_12155 XFC3_12160 PF00085 Thioredoxin XFC3_12165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XFC3_12165 PF07497 Rho termination factor, RNA-binding domain XFC3_12165 PF07498 Rho termination factor, N-terminal domain XFC3_12170 PF03971 Monomeric isocitrate dehydrogenase XFC3_12180 PF03572 Peptidase family S41 XFC3_12180 PF13180 PDZ domain XFC3_12185 PF01551 Peptidase family M23 XFC3_12190 PF02225 PA domain XFC3_12190 PF04389 Peptidase family M28 XFC3_12195 PF00150 Cellulase (glycosyl hydrolase family 5) XFC3_12200 PF07992 Pyridine nucleotide-disulphide oxidoreductase XFC3_12200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster XFC3_12205 PF00310 Glutamine amidotransferases class-II XFC3_12205 PF01493 GXGXG motif XFC3_12205 PF01645 Conserved region in glutamate synthase XFC3_12205 PF04898 Glutamate synthase central domain XFC3_12210 PF03807 NADP oxidoreductase coenzyme F420-dependent XFC3_12210 PF14748 Pyrroline-5-carboxylate reductase dimerisation XFC3_12215 PF00593 TonB dependent receptor XFC3_12215 PF07715 TonB-dependent Receptor Plug Domain XFC3_12225 PF00440 Bacterial regulatory proteins, tetR family XFC3_12230 PF00106 short chain dehydrogenase XFC3_12255 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XFC3_12255 PF04851 Type III restriction enzyme, res subunit XFC3_12270 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XFC3_12270 PF04851 Type III restriction enzyme, res subunit XFC3_12270 PF12008 Type I restriction and modification enzyme - subunit R C terminal XFC3_12275 PF01420 Type I restriction modification DNA specificity domain XFC3_12285 PF02384 N-6 DNA Methylase XFC3_12285 PF12161 HsdM N-terminal domain XFC3_12290 PF01810 XFC3_12290 XFC3_12305 PF11855 XFC3_12305 XFC3_12310 PF13835 XFC3_12310 XFC3_12315 PF13555 P-loop containing region of AAA domain XFC3_12325 PF13558 Putative exonuclease SbcCD, C subunit XFC3_12330 PF09983 XFC3_12330 XFC3_12330 PF11795 XFC3_12330 XFC3_12345 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XFC3_12345 PF04851 Type III restriction enzyme, res subunit XFC3_12345 PF11867 XFC3_12345 XFC3_12355 PF01420 Type I restriction modification DNA specificity domain XFC3_12360 PF02384 N-6 DNA Methylase XFC3_12360 PF12161 HsdM N-terminal domain XFC3_12375 PF05590 XFC3_12375 XFC3_12450 PF12811 XFC3_12450 XFC3_12485 PF05973 XFC3_12485 XFC3_12505 PF04591 Protein of unknown function, DUF596 XFC3_12515 PF04591 Protein of unknown function, DUF596 XFC3_12530 PF04591 Protein of unknown function, DUF596 XFC3_12535 PF04591 Protein of unknown function, DUF596 XFC3_12540 PF04830 XFC3_12540 XFC3_12540 PF05590 XFC3_12540 XFC3_12580 PF01926 50S ribosome-binding GTPase XFC3_12580 PF10396 GTP-binding protein TrmE N-terminus XFC3_12580 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE XFC3_12585 PF00656 Caspase domain XFC3_12585 PF01522 Polysaccharide deacetylase XFC3_12590 PF02096 60Kd inner membrane protein XFC3_12590 PF14849 YidC periplasmic domain XFC3_12595 PF00825 Ribonuclease P XFC3_12600 PF00468 Ribosomal protein L34